WO1995023853A1 - Desulfurococcus amylase and pullulanase - Google Patents
Desulfurococcus amylase and pullulanase Download PDFInfo
- Publication number
- WO1995023853A1 WO1995023853A1 PCT/DK1995/000098 DK9500098W WO9523853A1 WO 1995023853 A1 WO1995023853 A1 WO 1995023853A1 DK 9500098 W DK9500098 W DK 9500098W WO 9523853 A1 WO9523853 A1 WO 9523853A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- pullulanase
- amylase
- starch
- determined
- desulfurococcus
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2405—Glucanases
- C12N9/2451—Glucanases acting on alpha-1,6-glucosidic bonds
- C12N9/2457—Pullulanase (3.2.1.41)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2405—Glucanases
- C12N9/2408—Glucanases acting on alpha -1,4-glucosidic bonds
- C12N9/2411—Amylases
- C12N9/2414—Alpha-amylase (3.2.1.1.)
- C12N9/2417—Alpha-amylase (3.2.1.1.) from microbiological source
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2405—Glucanases
- C12N9/2451—Glucanases acting on alpha-1,6-glucosidic bonds
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P19/00—Preparation of compounds containing saccharide radicals
- C12P19/14—Preparation of compounds containing saccharide radicals produced by the action of a carbohydrase (EC 3.2.x), e.g. by alpha-amylase, e.g. by cellulase, hemicellulase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P19/00—Preparation of compounds containing saccharide radicals
- C12P19/16—Preparation of compounds containing saccharide radicals produced by the action of an alpha-1, 6-glucosidase, e.g. amylose, debranched amylopectin
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P7/00—Preparation of oxygen-containing organic compounds
- C12P7/02—Preparation of oxygen-containing organic compounds containing a hydroxy group
- C12P7/04—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic
- C12P7/06—Ethanol, i.e. non-beverage
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
- C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
- C12Y302/01041—Pullulanase (3.2.1.41)
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02E—REDUCTION OF GREENHOUSE GAS [GHG] EMISSIONS, RELATED TO ENERGY GENERATION, TRANSMISSION OR DISTRIBUTION
- Y02E50/00—Technologies for the production of fuel of non-fossil origin
- Y02E50/10—Biofuels, e.g. bio-diesel
Definitions
- the present invention relates to a novel thermostable amylase and a novel thermostable pullulanase and their use in 5the production of sweeteners and ethanol from starch.
- sweeteners from starch has been largely improved by application of different microbial enzymes to obtain better quality and yields, but the necessity of 10performing several steps of the starch-hydrolysing process at elevated temperatures means that there is still a need for new starch-hydrolysing enzymes with increased thermal stability.
- Pyrococcus e.g. Pyrococcus wosei and Pyrococcus furiosus. for reference see Arch. Microbiol. 15155. 1991, pp. 572-578, and Appl. Env. Microbiol. 56. 1990, pp.1985-1991, can produce highly thermostable amylases.
- thermostable amylase and a novel thermostable pullulanase can be obtained from Desulfurococcus mucosus. a strain not previously reported to produce thermostable amylase and pullulanase; these new
- 25enzymes have temperature optimum around 100°C.
- the invention provides an amylase preparation, characterized by being producible by cultivation of an amylase producing strain of Desulfurococcus mucosus. and a pullulanase preparation, characterized by being producible by
- Fig. 1 shows the relative activity (% rel. ) of an amylase (°) and a pullulanase ( ⁇ ) of the invention at various temperatures (determined at pH 5.5 with starch and pullulan, respectively, as substrate) .
- Fig. 2 shows the relative activity (% rel.) of an amylase ( ⁇ ) and a pullulanase ( ⁇ ) of the invention at various pH, determined at 90°C with starch and pullulan, respectively, as substrate.
- amylase is derived from an amylase producing strain of Desulfurococcus mucosus and pullulanase is derived from a pullulanase producing strain of Desulfurococcus mucosus.
- a strain representative of Desulfurococcus mucosus has been made publicly available under Accession No. DSM 2162. The number is published in the DSM Catalogue of Strains, 1993.
- Amylase and pullulanase of the invention may be produced by anaerobic cultivation of the above mentioned strain on a nutrient medium containing suitable carbon and nitrogen sources, such media being known in the art. Anaerobic con ⁇ ditions may be achieved during the preparation of media by sparging with N 2 and following the anaerobic techniques as described by Balch and Wolfe in Appl. Env. Microbiol. 32, 1976, pp. 781-791.
- amylase and pullulanase of the invention can be produced by aerobic cultivation of a trans ⁇ formed host organism containing the appropriate genetic information from the above mentioned strain. Such transformants can be prepared and cultivated by methods known in the art.
- the amylase and the pullulanase may be recovered by removing the cells from the fermentation medium (e.g. by centrifugation or filtration) and then concentrating the broth (e.g. by ultrafiltration) . If desired, the amylase and the pullulanase may be further purified by known methods.
- the enzymes of the invention have immunochemical properties identical or partially identical (i.e. at least partially identical) to those of an enzyme derived from the strain Desulfurococcus mucosus. DSM 2162.
- the immunochemical properties can be determined immunologically by cross-reaction identity tests.
- the identity tests can be performed by the well-known Ouchterlony double immunodiffusion procedure or by tandem crossed immunoelectro- phoresis according to Axelsen N.H. ; Handbook of Immunopre- cipitation-in-Gel Techniques; Blackwell Scientific Publications
- Monospecific antisera are generated according to the above mentioned method by immunizing rabbits with the purified enzymes of the invention.
- the immunogens are mixed with Freund's adjuvant and injected subcutaneously into rabbits every second week.
- Antisera are obtained after a total im ⁇ munization period of 8 weeks, and immunoglobulins are prepared therefrom as described by Axelsen N.H. , supra.
- An amylase of the invention can be characterized by having amylase activity at temperatures of from below 60°C to approximately 120°C, having activity optimum at temperatures in the range 95-105°C, determined at pH 5.5 with starch as substrate.
- the amylase can also be characterized by having amylase activity at pH values of from below pH 4.0 to ap- proximately pH 11.0, having optimum in the range pH 5.5 to pH 6.5, determined at 90°C with starch as substrate.
- a pullulanase of the invention can be characterized by having pullulanase activity at temperatures of from below 60°C to approximately 120°C, having activity optimum at temperatures in the range 90-105°C, determined at pH 5.5 with pullulan as substrate.
- the pullulanase can also be charac ⁇ terized by having pullulanase activity at pH values of from below pH 4.0 to approximately pH 9.0, having optimum in the range pH 4.8 to pH 5.8, determined at 90°C with pullulan as substrate.
- Amylase activity is determined by measuring the amount of reducing sugar released during the incubation with starch.
- One unit (U) of amylase activity is defined as the amount of amylase that releases 1 ⁇ mole of reducing sugar (as maltose standard) per min. under the following assay con ⁇ ditions: A 0.05 ml volume of 1% soluble starch is added to 0.05 ml of 0.1 M sodium acetate buffer pH 5.5. 25 ⁇ l of enzyme solution are added to this mixture and the sample is incubated at 90°C for 30 min. The reaction is stopped by cooling on ice, and the amount of reducing sugar is determined by dinitro- salicylic acid. Sample blanks are used to correct for non- enzymatic release of reducing sugar.
- Pullulanase activity is determined by measuring the amount of reducing sugar released during the incubation with pullulan.
- One unit (U) of pullulanase activity is defined as the amount of pullulanase that releases 1 ⁇ mole of reducing sugar (as maltose standard) per min. under the following assay conditions: A 0.05 ml volume of 1% pullulan is added to 0.05 ml of 0.1 M sodium acetate buffer pH 5.5. 25 ⁇ l of enzyme solution are added to this mixture and the sample is incubated at 90°C for 30 min. The reaction is stopped by cooling on ice, and the amount of reducing ⁇ sugar is determined by dinitrosalicylic acid. Sample blanks are used to correct for nonenzymatic release of reducing sugar.
- the enzymes of this invention possess valuable properties allowing for various industrial applications.
- the enzymes in being thermostable, find potential application in the production of sweeteners and ethanol from starch.
- Conditions for conventional starch converting processes and liquefaction and/or saccharification processes are de ⁇ scribed in for instance US Patent No. 3,912,590 and EP patent publications Nos. 252,730 and 63,909.
- DSM 2162 The strain Desulfurococcus mucosus, DSM 2162, was recultured from glycerol-preserved cells using the medium recommended by the Deutsche Sammlung von Mikroorganismen (DSM) .
- the microorganisms were grown in 1 liter batch cultures under the following conditions: Medium: DSM184 (DSM184 is described in DSM Catalogue of Strains, 1993) , pH 5.8, temp. 85°C; in the medium sulphur and tryptone were omitted and starch (0.5% w/v) was added as the only carbohydrate; yeast extract concentration was 0.1% (w/v) .
- the cell density achieved in this medium was ⁇ 10 8 cells/ml. Anaerobic conditions were achieved during the preparation of media by sparging with N 2 and following the techniques as described by Balch in Appl. Env. Microbiol. 32, 1976, pp. 781-791.
- the culture fluid was centrifuged at 12.000 x g for 30 min. at 4°C, and the cell free supernatant was concentrated up to 100-fold using an Amicon Ultrafiltration System.
- the cell pellet was resuspended in 50 mM sodium acetate buffer pH 5.5 and sonicated three times for 3 min. at 50% duty cycle by a BRANSON 450 sonifier.
- the cell debris was separated from the supernatant after centrifugation at 10.000 x g for 30 min. at 4°C.
- Temperature optima were determined by incubation of samples for 30 minutes at pH 5.5 at temperatures from 60°C to 120°C. The incubation was conducted in closed Hungate tubes in order to prevent boiling of the solution.
- Fig. 1 shows the result (Amylase (° ) and pullulanase ( ⁇ ) ) .
- Fig. 2 shows the result (Amylase (°) and pullulanase
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- Life Sciences & Earth Sciences (AREA)
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- Bioinformatics & Cheminformatics (AREA)
- Genetics & Genomics (AREA)
- Biochemistry (AREA)
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- General Engineering & Computer Science (AREA)
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- Molecular Biology (AREA)
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Abstract
Description
Claims
Priority Applications (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP95910469A EP0753056A1 (en) | 1994-03-04 | 1995-03-02 | Desulfurococcus amylase and pullulanase |
AU17562/95A AU1756295A (en) | 1994-03-04 | 1995-03-02 | Desulfurococcus amylase and pullulanase |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
DK256/94 | 1994-03-04 | ||
DK25694 | 1994-03-04 |
Publications (1)
Publication Number | Publication Date |
---|---|
WO1995023853A1 true WO1995023853A1 (en) | 1995-09-08 |
Family
ID=8091496
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/DK1995/000098 WO1995023853A1 (en) | 1994-03-04 | 1995-03-02 | Desulfurococcus amylase and pullulanase |
Country Status (3)
Country | Link |
---|---|
EP (1) | EP0753056A1 (en) |
AU (1) | AU1756295A (en) |
WO (1) | WO1995023853A1 (en) |
Cited By (6)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0880590A1 (en) * | 1996-02-16 | 1998-12-02 | Recombinant Biocatalysis Inc. | Esterases |
WO2000001796A2 (en) * | 1998-07-02 | 2000-01-13 | Novozymes A/S | Starch debranching enzymes |
US6043074A (en) * | 1999-05-07 | 2000-03-28 | Novo Nordisk A/S | Desulfurococcus amylopullulanase |
US6265197B1 (en) | 1998-07-02 | 2001-07-24 | Novozymes A/S Krogshoejvej | Starch debranching enzymes |
US7288400B2 (en) | 1996-02-16 | 2007-10-30 | Verenium Corporation | Nucleic acids encoding esterases and methods of making and using them |
WO2011058105A1 (en) | 2009-11-13 | 2011-05-19 | Novozymes A/S | A brewing method |
-
1995
- 1995-03-02 EP EP95910469A patent/EP0753056A1/en not_active Withdrawn
- 1995-03-02 WO PCT/DK1995/000098 patent/WO1995023853A1/en not_active Application Discontinuation
- 1995-03-02 AU AU17562/95A patent/AU1756295A/en not_active Abandoned
Non-Patent Citations (4)
Title |
---|
DIALOG INFORMATION SERVICES, File 357, Derwent Biotechnology Abs, Dialog accession no. 170578, DBA accession no. 94-13129, ROSSI M. et al., "Extremophiles in Biotechnology - Production and Application of e.g. Thermophilic Bacterium and its Enzyme (Conference Paper)"; & PROG. BIOTECHNOL. (9, Pt.1,255-62) 1994. * |
DIALOG INFORMATION SERVICES, File 55, BIOSIS PREVIEWS, Dialog accession no. 11491261, Biosis no. 98091261, CANGANELLA F. et al., "Characterization of Amylolytic and Pullulytic Enzymes from Thermophilic Archaea and from a New Fervidobacterium Species"; & APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 42 (2-3), 1994, 239-245. * |
NATIONAL LIBRARY OF MEDICINE (NLM), MEDLINE, Medline accession no. 94079331, ADAMS M.W., "Enzymes and Proteins from Organisms that Grow Near and Above 100 Degrees C"; & ANNU. REV. MICROBIOL. 1993;47:627-58. * |
TIBTECH, Volume 10, Sept 1992, DON A. COWAN, "Biotechnology of the Archaea", page 315. * |
Cited By (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP1550721A2 (en) * | 1996-02-16 | 2005-07-06 | Diversa Corporation | Esterases |
EP0880590A1 (en) * | 1996-02-16 | 1998-12-02 | Recombinant Biocatalysis Inc. | Esterases |
US7288400B2 (en) | 1996-02-16 | 2007-10-30 | Verenium Corporation | Nucleic acids encoding esterases and methods of making and using them |
EP1550721A3 (en) * | 1996-02-16 | 2007-04-18 | Diversa Corporation | Esterases |
EP0880590A4 (en) * | 1996-02-16 | 2000-11-08 | Diversa Corp | Esterases |
US7374922B2 (en) | 1998-07-02 | 2008-05-20 | Novozymes A/S | Starch debranching enzymes |
US6265197B1 (en) | 1998-07-02 | 2001-07-24 | Novozymes A/S Krogshoejvej | Starch debranching enzymes |
WO2000001796A3 (en) * | 1998-07-02 | 2000-03-09 | Novo Nordisk As | Starch debranching enzymes |
WO2000001796A2 (en) * | 1998-07-02 | 2000-01-13 | Novozymes A/S | Starch debranching enzymes |
EP2216401A1 (en) * | 1998-07-02 | 2010-08-11 | Novozymes A/S | Starch debranching enzymes |
US7816113B2 (en) | 1998-07-02 | 2010-10-19 | Novozymes Als | Starch debranching enzymes |
US6043074A (en) * | 1999-05-07 | 2000-03-28 | Novo Nordisk A/S | Desulfurococcus amylopullulanase |
WO2011058105A1 (en) | 2009-11-13 | 2011-05-19 | Novozymes A/S | A brewing method |
Also Published As
Publication number | Publication date |
---|---|
AU1756295A (en) | 1995-09-18 |
EP0753056A1 (en) | 1997-01-15 |
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