WO1992015885A1 - Methods for selecting antibody reagents; anti-idiotype antibodies; and aids vaccine formulations - Google Patents

Methods for selecting antibody reagents; anti-idiotype antibodies; and aids vaccine formulations Download PDF

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Publication number
WO1992015885A1
WO1992015885A1 PCT/US1992/001749 US9201749W WO9215885A1 WO 1992015885 A1 WO1992015885 A1 WO 1992015885A1 US 9201749 W US9201749 W US 9201749W WO 9215885 A1 WO9215885 A1 WO 9215885A1
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Prior art keywords
antibodies
gpl20
antibody
hiv
idiotype
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PCT/US1992/001749
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French (fr)
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Chang-Yuil Kang
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Idec Pharmaceuticals Corporation
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Publication of WO1992015885A1 publication Critical patent/WO1992015885A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/42Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against immunoglobulins
    • C07K16/4208Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against immunoglobulins against an idiotypic determinant on Ig
    • C07K16/4216Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against immunoglobulins against an idiotypic determinant on Ig against anti-viral Ig
    • C07K16/4225Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against immunoglobulins against an idiotypic determinant on Ig against anti-viral Ig against anti-HIV Ig
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/08Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
    • C07K16/10Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
    • C07K16/1036Retroviridae, e.g. leukemia viruses
    • C07K16/1045Lentiviridae, e.g. HIV, FIV, SIV
    • C07K16/1063Lentiviridae, e.g. HIV, FIV, SIV env, e.g. gp41, gp110/120, gp160, V3, PND, CD4 binding site
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • G01N33/56983Viruses
    • G01N33/56988HIV or HTLV
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6854Immunoglobulins
    • G01N33/686Anti-idiotype
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies

Definitions

  • the present invention relates generally to the field of immunology and, more particularly, to novel methods of selecting for therapeutically useful antibodies. Further, the present invention relates to novel anti-idiotype anti ⁇ bodies and vaccine formulations thereof that are useful in the immunotherapy and prevention of HIV infection.
  • HIV Human Immunodeficiency Virus
  • AIDS acquired immunodeficiency syndrome
  • any reagent that interferes with these steps is considered to block the virus infec ⁇ tion and is of potential therapeutic value.
  • Such reagents under current investigation include antibodies, which are generally functionally described as "neutralizing antibodies.”
  • SUBSTITUTESHEET Amino acid sequence analysis of various HIV isolates from a single patient as well as different patients indicates that gpl20 contains hypervariable regions inter ⁇ spersed among highly conserved regions. This finding indicates that HIV variation in vivo can occur rapidly during the chronic infection. The degree of diversity among different strains of HIV within the gpl20 molecule may be due in part to natural selection during interac ⁇ tions with the host immune system. Antibodies that bind to hypervariable regions of the HIV envelope generally only react with a single isolate or strain of the virus: such antibodies are termed "type-specific.” At present, about 20 different strains of HIV have been identified.
  • V3 loop antibodies directed against one of these hypervariable regions of gpl20 known as the "V3 loop" will neutralize HIV.
  • this effect has generally been type-specific; i.e., it is well documented that among anti-gpl20 antibodies, those specific to the V3 loop may exert a neutralizing effect on only a single isolate or strain of HIV.
  • a single amino acid mutation in the V3 region allows the virus to escape neutralization by such antibodies.
  • SUBSTITUTESHEET with various HIV isolates via their ability to bind to conserved regions of gpl20.
  • Antibodies that bind to conserved regions of HIV and recognize multiple strains of the virus are termed "group-specific.” Thus, antibodies that will neutralize multiple strains of HIV are said to be capable of group-specific neutralization.
  • These neutralizing antibodies would play an important role in preventing viral infection (Weiss, et al . (1985) Nature 316:69) as well as killing HIV-infected cells via antibody-dependent cell-mediated cytotoxicity (Rook, et al . (1987) J. Immunol . 138:1064) and complement-mediated cytolysis.
  • HIV vaccine development strategies have been based on preparations including whole or portions of the major envelope protein.
  • Native, recombinant, synthetic, vaccinia-encoded envelope proteins and whole inactivated virus have been prepared and tested.
  • chimpanzees were immunized with the HIV envelope protein encoded in a vaccinia virus.
  • the animals produced both humoral (antibody) and cellular (T-cell) immune responses specific for the envelope protein; however, these primates were not protected from infectious challenge with HIV (Hu, et al . (1989) Nature 328:721) .
  • Ab2 ⁇ which block antigen binding to Abl, but are not internal images of the antigen
  • Ab2 ⁇ which bind to the Abl, but do not block binding of the antigen to Abl. See FIGURE 1.
  • non-primate animals have generally been used as animal models to evaluate the Ab3 response.
  • results have been inconclusive at best. The reasons for these apparent failures are unclear, but some of these studies indicate that broadly reactive anti- HIV neutralizing antibodies were not generated in suffi ⁇ cient titer in the experimental animals, allowing HIV to "escape" the immune response.
  • the present invention is based on Applicant's dis ⁇ covery of a novel method for selecting antibody reagents for vaccine formulations that are capable of inducing group-neutralizing anti-HIV antibody responses in humans.
  • the present invention is directed to a method of selecting monoclonal anti-idiotype antibody reagents useful in vaccine formulations for the treatment or prevention of HIV infection.
  • the first step in this method requires preparing human polyclonal anti- gpl20 antibodies (Abls) and subsequently generating a first group of monoclonal anti-idiotype antibodies (Gl- Ab2s) capable of reacting with or immunologically binding with the human polyclonal anti-gpl20 antibodies.
  • G2-Ab2s monoclonal anti-idiotype antibodies
  • the second group of monoclonal anti-idiotype antibodies (G2-Ab2s) is screened for a subset or a third group of monoclonal anti-idiotype antibodies (G3-Ab2s) which are characterized by their ability to generate an anti-anti-idiotype antibody (Ab3) response in a primate host, wherein the anti-anti-idiotype antibody (Ab3) immunologically binds with gpl20 and neutralizes in vitro multiple strains of HIV.
  • the Abls are prepared from pooled human sera from HIV-positive asymptomatic individuals and purified by passing over a gpl20 column to increase the concentration of anti-gpl20 antibodies. Also preferred is the generation of murine monoclonal Ab2s.
  • the present invention is further directed broadly to monoclonal anti-idiotype antibodies that are capable of eliciting a group neutralizing anti-HIV antibody response in humans.
  • the present invention is also directed to
  • G3-Ab2s S monoclonal anti-idiotype antibodies selected according to the methods described herein.
  • the present invention is further directed to vaccine formulations including the monoclonal anti-idiotype antibodies (G3-Ab2s) disclosed herein.
  • FIGURE 1 graphically illustrates the concepts of "idiotype matching” (1A) and "idiotype mimicry” (IB) .
  • FIGURE 2 shows that the flowthrough fraction of Total Anti-gpl20 Abs bound to gpl20 IIIB and not to gpl20 SF2 .
  • FIGURE 3 shows that the Total Anti-gpl20 Abs bound to gpl20 IIIB and not to gpl20 SF2 .
  • FIGURE 4 graphically depicts the purification of Total Anti-gpl20 Abs.
  • FIGURE 5 illustrates the effective inhibition of 125 I-labeled gpl20 SF2 / CD4 by CD4-site antibodies.
  • FIGURE 6 depicts HIV virus neutralizing activity of CD4-site antibodies.
  • FIGURE 7 depicts HIV virus neutralizing activity of non-V3 antibodies.
  • FIGURE 8 lists the first group of anti-idiotype antibodies and the characteristics of corresponding Abls.
  • FIGURE 9 summarizes the characterization of corresponding Ab3s against candidate Ab2 vaccines in monkeys.
  • FIGURE 10 summarizes the neutralizing activity of Ab3 isolated from 3C9 immunized monkeys.
  • FIGURE 11 depicts neutralizing activity of human 3C9+Ab against HIV laboratory strains (Left) and patient primary HIV isolates (Right) .
  • FIGURE 12 depicts the binding of gpl20 SF2 (Left) and gpl20 IIIB (Right) to purified Ab3 from monkeys PR0703 and PR0783.
  • the present invention is based on Applicant's novel anti-idiotype (anti-id or Ab2) approach to developing an HIV vaccine that possesses the critical biological prop ⁇ erty of eliciting group-specific neutralizing antibodies.
  • anti-id or Ab2 anti-id or Ab2
  • the present invention is driven by the concept of "idiotype matching" rather than the prior art concept of "antigen mimicry" by anti-ids.
  • Idiotype matching utilizes anti-ids as surrogates for antigen, e.g.. in an attempt to stimulate specific elements of the B cell repertoire in humans.
  • the anti-id vaccine candidates of the present invention may be Ab2 A, B, or ⁇ as long as they elicit group neutralizing Ab3 responses. Compare, FIGURE 1A and FIGURE IB.
  • Human Abls preferably purified from sero- positive healthy individuals, are used as templates to generate Ab2s.
  • This choice of starting material increases the likelihood that the Ab2-based vaccine will generate Ab3s in humans that are immunologically equivalent to the human Abls with respect to antigen binding potential, i .e . , anti-HIV binding.
  • This feature of the invention takes advantage of the fact that Applicant knows that B cell repertoires pre-exists in humans that are capable of producing Abl-like Ab3s (so called Abl')
  • Abl' Abl-like Ab3s
  • using a murine Abl assumes that the B cell repertoire of the mouse is genetically and immunologically equivalent to the human B cell repertoire—possibly a fatal flaw for vaccine development.
  • SUBSTITUTESHEET The principal advantages in using Applicant's anti-id approach to select an HIV vaccine are threefold. First, selected anti-ids elicit only beneficial anti-gpl20 anti ⁇ bodies (e.g., group-specific neutralizing antibodies). Second, anti-ids elicit high titers of certain anti-gpl20 antibodies. Third, the biological properties of anti- gpl20 antibodies elicited by these Ab2 are predictable.
  • the present invention is directed to a method of selecting monoclonal anti-idiotype antibody reagents that are useful in vaccine formulations for the treatment and prevention of HIV infection.
  • the first step in this method involves the preparation of human polyclonal anti-gpl20 antibodies (Abls) that are to be used as templates to generate Ab2s.
  • the human polyclonal anti-gpl20 antibodies are obtained from human sera of HIV-positive, asymptomatic individuals. It is further preferred that such sera is purified to increase the representation of anti-gpl20 antibodies by passing the pooled human sera over a gpl20 column.
  • the total anti-gpl20 antibodies will be passed over not one but two gpl20 columns, wherein each gpl20 column represents a different strain of gpl20. It is most preferred that the human polyclonal anti-gpl20 antibodies represent the total anti-gpl20 antibodies.
  • the total anti-gpl20 antibody population can be dissected into fractions for use in the present invention: CD4 attachment site-specific anti-gpl20 antibodies, V3 region-specific anti-gpl20 antibodies or non-V3 region-specific anti-gpl20 antibodies.
  • the second step of the method of the present invention involves the generation of a first group of monoclonal anti-idiotype antibodies which are capable of reacting with the human polyclonal anti-gpl20 antibodies prepared in the first step of the method.
  • these anti-idiotype antibodies are urine monoclonal antibodies generated by conventional hybridoma technology.
  • the term "monoclonal” is intended to encompass antibodies derived from a single clone as well as mono-specific antibodies derived by molecular biology techniques.
  • Alternative sources of anti-idiotype antibodies contemplated by the present invention include human, primate, chimeric, and humanized antibodies, as well as antibodies synthesized by molecular biology techniques.
  • the term "antibody” is intended to include whole antibodies, antibody fragments, Fab fragments, single chain antibodies, and immuno ⁇ logically functional antibody equivalents.
  • the third step in the method of the present invention involves screening this first group of antibodies for a second group (subset of first group) of monoclonal anti-idiotype antibodies that are characterized by their ability to react with or immunologically bind anti-gpl20 antibodies that neutralize in vitro multiple strains of HIV.
  • the anti-gpl20 HIV neutralizing antibodies are human.
  • these human anti- gpl20 HIV neutralizing antibodies are human antibodies selected from the pool of human polyclonal antibodies prepared according to the first step of the method. As used herein, neutralization of more than two strains of HIV is considered to be "multiple" strain neutralizing.
  • anti-gpl20 antibodies may be selected by passing the human polyclonal antibody preparation made in the first step of the method over an Ab2 (group 1) column, and selecting those anti-gpl20 antibodies that are capable of in vitro neutralization of multiple strains of HIV.
  • the present invention is also directed to antibodies, in particular, to monoclonal anti-idiotype antibodies that are capable of eliciting a group- neutralizing anti-HIV antibody response in humans.
  • monoclonal anti-idiotype antibodies selected according to the selection method described above.
  • hybridoma cell lines capable of producing a monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans.
  • the most preferred is the hybridoma cell line deposited with the ATCC, Rockville, MD on March 8, 1991, designated accession no. HB10701.
  • the present invention includes monoclonal antibodies capable of eliciting a substantially equivalent immune response in humans as a monoclonal antibody produced by the hybridoma cell lines described above.
  • such a monoclonal antibody would react with and compete for binding to the same anti-gpl20 antibody as a monoclonal antibody produced by the hybridoma cell lines described above.
  • An additional embodiment of the invention is the development of vaccine formulations including, in mixture with a pharmaceutically acceptable carrier, a monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans.
  • Vaccine formulation including selection of appropriate adjuvants and carriers, is well known to those of skill in the art. Once formulated, a vaccine's dosimetry would be based upon patient and clinical factors that are well appreciated by those of skill in the art of vaccine deliv ⁇ ery.
  • the vaccines of the present invention may be either prophylactic or therapeutic in nature. Although a single anti-idiotype antibody reagent vaccine is desirable, it is contemplated by the present invention that multiple anti- idiotype antibodies may be formulated in a "cocktail" vaccine approach.
  • a preferred vaccine formulation would include about 2.5 mg of an antibody of the present invention formulated with about 100 ug of termutide and SAF (Syntex adjuvant formulation — 2.0 mg polysorbate 80, 12.5 mg Poloxy er 401, and 50 mg
  • SUBSTITUTESHEET squalane SUBSTITUTESHEET squalane.
  • An alternative formulation may exclude the termutide component.
  • EXAMPLE 1A Preparation of Starting Materials—Human Polyclonal Total Anti-gpl20 Antibodies.
  • Total anti-gpl20 antibodies (anti-gpl20 SF2 ) ("Total Anti-gpl20 Abs") were purified from human sera by affinity chromatography using a gpl20 SF2 -Sepharose column.
  • Recombinant gpl20 SF2 was derived from engineered CHO cells.
  • a pool of sera from HIV-infected asymptomatic individuals purchased from North American Biologicals, Inc., Miami, Florida 33169 were inactivated by detergent (1% NP40) and heat (l hr. at 56°C) treatment.
  • the sera was dialyzed against PBS and ammonium sulfate (40% as final concentra ⁇ tion) was added to the sera to isolate the immunoglobulin fraction.
  • the precipitated immunoglobulin fraction was reconstituted with PBS, filtered and applied to the gpl20 SF2 -Sepharose column.
  • the bound Total Anti-gpl20 Abs on the column were eluted with pH 3.0 glycine buffer and dialyzed against PBS.
  • the recovery of total anti-gpl20 antibodies in sera was approximately 300 ⁇ g/ml.
  • Antibodies binding to gpl20 SF2 are expected to consist of two kinds: (a) SF2 type-specific antibodies, and (b) antibodies binding to conserved regions of gpl20 such as the CD4-attachment site. Since the individuals contribut- ing to the Ig pool might have been infected with a variety of HIV strains, the flowthrough fraction may bind to gpl20 derived from strains other than SF2 . Indeed, as shown in FIGURE 2, Applicant found that the flowthrough fraction bound to gpl20 IIIB , not to gpl20 SF2 indicating the presence of III B type-specific anti-gpl20 antibodies in the flow ⁇ through fraction.
  • FIGURE 2 shows that Total Anti-gpl20 Abs exhibited neutralizing activities against four different HIV isolates, although their neutralizing activities against the different HIV isolates varied as much as 10-50 fold, indicating that Total Anti-gpl20 Abs contains signifi ⁇ cantly different populations and amounts of type- and group-specific neutralizing antibodies. From these results, Applicant reasoned that the difference in the neutralizing activities of Total Anti-gpl20 Abs against the various viral isolates could be explained by (a) strain-to-strain differences in the amount of anti-gpl20 antibodies required for neutralization of each virion, and (b) the presence of type- or group-specific neutralizing antibodies. To demonstrate the presence of type-specific neutralizing antibodies in Total Anti-gpl20 Abs, Applicant tested the binding of Total Anti-gpl20 Abs to type- specific neutralizing epitopes derived from the V3 region of different gpl20s.
  • CD4-site Abs 0.15 0.01 0.01 0.03 0.01
  • ⁇ Binding activities are expressed by O.D. obtained at 5Jg/ml of each preparation.
  • Table 1 shows that Total Anti-gpl20 Abs bind extensively to the MN isolate derived epitope, less extensively to the IIIB, SC and WMJ-2 derived epitopes and weakly to the RF-derived epitope.
  • the highest binding activities of Total Anti-gpl20 Abs against the MN- derived epitope is consistent with the fact that Total Anti-gpl20 Abs exhibited the highest neutralizing activi ⁇ ties against the MN isolate.
  • SUBSTITUTESHEET Applicant analyzed this preparation by SDS gel electro- phoresis and ELISA, using a monoclonal anti-CD4 antibody, and could not detect any sCD4 by either method.
  • FIGURE 5 shows that CD4-site Abs effectively inhibited binding of 1 5 I-labeled gpl20 SF2 to CD 4 cells.
  • the approxi ⁇ mate IC 50 of CD4-site Abs in this assay was ten times less than that of sCD4.
  • Applicant observed almost the same results with 125 I-labeled gpl20III B . This result indicated that this IgG fraction contained significant amounts of CD4-site Abs.
  • various anti-gpl20 antibodies were coated on microtiter plates and incubated with 125 I- labeled gpl20 SF2 in the presence or absence of sCD4.
  • Table 2 shows that sCD4 inhibited the binding of CD4- site Abs to gpl20 SF2 by 71%, whereas only 16% of Total Anti-gpl20 Abs binding to gpl20 sp2 was inhibited by sCD4.
  • This result indicated that our purification significantly enriched CD4-attachment site-specific anti-gpl20 anti ⁇ bodies; however, these antibodies still contained substantial amounts of non-CD4 attachment site-specific anti-gpl20 antibodies.
  • Applicant tested the binding of CD4 site Abs to synthetic peptides derived from the V3 domain of different HIV isolate gpl20s.
  • CD4 site Abs bound only weakly to the MN isolate-derived epitope and not to the other isolate-derived epitopes. This finding demon ⁇ strates that the purification for CD4-site Abs removes most of the V3 region-specific anti-gpl20 antibodies. Since Applicant found that CD4-site Abs contain mainly CD4-attachment site-specific anti-gpl20 antibodies with minimal amounts of MN isolate specific neutralizing antibodies, Applicant investigated whether CD4-site Abs could neutralize different HIV isolates. As shown in FIGURE 6, CD4-site Abs exhibited almost the same extent of neutralizing activities against three different HIV isolates. Compared with CD4 site Abs, Total Anti-gpl20
  • SUBSTITUTESHEET Abs exhibit much higher neutralizing activities against the MN isolate, a little higher against the RF isolate and almost the same against the III B isolate. From the fact that CD4 site Abs effectively neutralized three different HIV isolates at or near equivalent antibody concentrations despite low or no binding activities against identical V3 specific peptides, Applicant concluded that CD4-site Abs exhibit mainly non-V3 group-specific neutralizing activi ⁇ ties, whereas, Total Anti-gpl20 Abs exhibit type- and group-specific neutralizing activities. Applicant util ⁇ ized these CD4-site Abs to generate murine monoclonal anti-ids.
  • EXAMPLE 1C Preparation of Anti-gpl20 Antibodies Depleted of Type-Specific Neutralizing Antibodies Another approach for identifying group-specific neutralizing antibodies was to deplete type-specific neutralizing antibodies from TAGA, using a column of V3 peptide Affi-Gel 401 and test this preparation for group- specific neutralizing activities.
  • Non-V3 Abs V3 region-specific antibodies
  • a mixture of two peptides (8 mg of each) derived from the V3 region of gpl20 SF2 (see peptides for sequence) were coupled to 10 ml of Affi-Gel 401 (Bio-Rad, Richmond, CA) . See method below.
  • the peptides were syn ⁇ thesized on an automated peptide synthesizer (model 430A, Applied Biosystems, Foster City, CA) by solid phase method.
  • the peptides were deprotected and cleaved from the support with HF/anisole or the "low-high" HF proce- dure.
  • the sequences of two SF2-derived peptides for an affinity column were as follows; V3SF2: TRPNNNTRKSIYIGPGRAFHTTGRI IGDIRKAHC and CTRPNNNTRKSIYIGPGRAFHTTGRIIGDIRKAHC.
  • the sequences of various V3 region peptides for binding assays were as follows; MN_ YNKRKRIHIGPGRAFYTTKNIIG, IIIB: NNTRKSIRIQRGPGRAFVTIGKIG, RF: NNTRKSITKGPGRVIYATGQIIG,
  • SUBSTITUTESHEET SC NNTTRSIHIGPGRAFYATGDI IG , WHJ-2 : NNVRRSLSIGPGRAFRTREGN.
  • Ten g of Total Anti-gpl20 Abs in PBS was repeatedly loaded on the peptide Affi-Gel column.
  • the flowthrough consisting of anti-gpl20 antibodies depleted of V3 region-specific antibodies (non-V3 Abs) , was collected.
  • SF2 V3 region-specific anti-gpl20 anti ⁇ bodies were eluted with pH3 glycine buffer.
  • the reduced resin was then transferred to a 15 ml conical tube and diluted with 10 ml of argon-saturated phosphate buffered saline.
  • the bis-maleimidomethyl ether in ethanol was added to the resin in a 100 fold molar excess of maleimide over sulfhydryls.
  • the reaction was allowed to proceed overnight at 1-8°C with rotation in a sealed tube.
  • the resin was subsequently transferred to a sintered glass funnel and washed extensively with argon- saturated PBS in order to remove excess reagent. Unreacted sulfhydryls were blocked by the addition of n-ethylmaleimide in ethanol in a sealed tube with rotation at 2-8°C overnight.
  • SUBSTITUTESHEET allowed to take place overnight at 2-8°C with rotation in a sealed tube. Following the coupling, the resin was washed with PBS in order to remove excess peptide.
  • FIGURE 7 shows that non-V3 Abs exhibited almost the same extent of neutralizing activities against three different HIV isolates. However, V3 region Abs exhibited strong neutralization activities against the MN isolate, minimal activities against III B and no activity against RF. Based on these observations, Applicant concluded that the neutralizing activities of non-V3 Abs are group-specific while the neutralizing activities of V3 region Abs are type-specific.
  • V3 region Abs are more effective than non-V3 Abs neutralizing antibodies in neutralizing a specific isolate.
  • SUBSTITUTESHEET antibodies rather than CD4- site Abs exist, they are not specific against a simple linear epitope of the V3 domain;
  • V3 region Abs are more effective than non- V3 Abs in neutralizing a specific HIV isolate. Although neutralizing efficacy of CD4-site Abs is relatively low, it is reasonable to assume that an HIV vaccine which induces high titers of CD4 site Abs should be effective in producing a clinical improvement in AIDS patients and preventing infection against various HIV isolates in healthy people.
  • EXAMPLE 2A Generation of First Group of Anti-id Mabs and Characterization for their Ability to React with Human Polyclonal Anti-gpl20 Antibodies.
  • anti-id Mabs was accomplished by fusing sp2 murine myeloma cells with splenocytes from mice which were immunized 2-3 times with polyclonal anti-gpl20 anti ⁇ bodies.
  • anti-id was selected for (i) binding to polyclonal human anti-gpl20 antibodies, (ii) not binding to any specific isotype standard antibody, (iii) no binding to Ig preparation of the same pool of sera depleted of Total Anti-gpl20 Abs by absorption on a gpl20 SF2 -Sepharose column.
  • mice were immunized with TAGA and the various other fractions of polyclonal anti-gpl20 antibodies purified from a pool of four sera from HIV-infected indi ⁇ viduals as described in EXAMPLES 1A-C. All immunizations were done by two S.C. injections of 50 micrograms of anti ⁇ body in SAF-MDP adjuvant at two week intervals, followed by a single i.p. injection of 50 micrograms of antibody in incomplete Freunds adjuvant ("IFA") 3 days prior to fusion. Spleen cells were fused with SP2 myeloma cells and hybrids were selected in HAT medium. Culture super ⁇ natant were tested by ELISA. Positive clones were
  • microtiter wells were coated with 300 ng of the following human Igs in PBS: Different anti-gpl20 antibodies used for immunizations; Ig preparations of the same pool of sera depleted of Total Anti-gpl20 Abs by absorption on a gpl20 SF2 -Sepharose column; and myeloma proteins representing all different isotypes of human heavy and light chains (The Binding Site, San Diego, CA) . Culture supernatants were tested for their binding activities to the antibody coated plates. Alkaline phosphatase-coupled goat anti-mouse Ig and phosphatase substrate (Sigma, St. Louis, MO) were used to detect antibodies binding to coated plates.
  • EXAMPLE 3A Selection of a Second Group of Anti-IDS from the First Group of Anti-IDS Based on in vitro Characterization
  • Anti-id Mabs were conjugated to Sepharose 4B by mixing 8 mg of antibodies with 5 ml of CNBr-activated Sepharose 4B (Pharmacia, Piscataway, NJ) . Then, 20-60 ml of the same sera pool used for various anti-gpl20 antibody preparation was loaded to anti-id Mab-Sepharose 4B columns. After washing extensively, bound antibodies (Abl Ids) were eluted with citrate buffer ph2.8 and dialyzed against PBS.
  • An ELISA plate was coated overnight with 0.2 ml of 0.5 ⁇ g/ml of gpl20 SF2 or gpl20III B (SmithKline Beecham, King of Prussia, PA) in 0.1 M bicarbonate buffer pH 9.8. The plate was washed three times with PBS and blocked for 1 hr. with 10% FCS in PBS. After washing, various concen ⁇ trations of Abls were added. Two hours later, the plate was washed and biotin-coupled goat anti-human Ig and avidin-coupled peroxidase was used for detecting antibody binding to the ELISA plate.
  • a quantitative neutralization assay of HIV by anti- gpl20 antibody was conducted as previously described (Nara, et al . (1988) Nature 332:469).
  • the virus stocks of HIV isolates were grown in H9 cells and harvested for optimal viral infectivity and aliquoted and frozen at -140°C in a vapor phase cryo unit. Equivalent amounts of virus (syncytial-forming unit) were used in the assays so as to allow for comparison of the various antibody fraction tested.
  • the assays are repeatable over a virus surviving fraction range of 1 to 0.001 within a two to four fold dilution of the antibody (p ⁇ O.001).
  • gpl20 binding activity of Ab3 gpl20 SF2 and gpl20 IIIB were iodinated by Bolton-Hunter reagent (ICN Biochemical, Cleveland, OH) and lactoperoxidase (Bio-Rad, Richmond, CA) respectively. Microtiter plates were coated for 18 hours with l ⁇ g of Ab3 in PBS. After washing, the plates were blocked for one hour with 1% BSA in PBS, 10,000 cpm of gpl20 SF2 or gpl20III B were added to wells and incubated for 3 hours. After washing three times, each well was counted.
  • Ab3 was further purified on gpl20-Sepharose affinity column to enrich gpl20 specific Ab3s. Applicant then tested whether gpl20 specific Ab3s neutralize multiple strains of HIV.
  • Cynomolgus monkeys received intramuscular injections with 2.5 mg of 3C9 in 1 ml of SAF (Syntex adjuvant formulation) containing 0.6 mg of N-acetylmuramyl-L-alanyl-D-isoglutamine (MDP) .
  • SAF Session adjuvant formulation
  • MDP N-acetylmuramyl-L-alanyl-D-isoglutamine
  • Recombinant Proteins gpl20 IIIB is a recombinant glycoprotein of an HIV IIIB isolate which is secreted from a Drosophilia cell line.
  • gpl20 SF2 is a recombinant envelope glycoprotein of an HIV SF2 isolate which is secreted from Chinese hamster ovary (CHO) cells.
  • the gpl20 IIIB and gpl20 SF2 are readily available to those of skill in the art.
  • Recombinant soluble CD4 (sCD4) was prepared by transfection of a truncated CD4 gene into CHO) cells. Secreted sCD4 in culture supernatants of CHO cells (representing 95% of the amino-terminal extracellular portion of the molecule) was purified on an anti-CD4 antibody conjugated Sepharose column.
  • SUBST ⁇ UTE SHEET treated sera were applied to a 3C9-conjugated Sepharose affinity column. After being washed extensively, bound antibodies (3C9+Abs) were eluted with citrate buffer (pH 2.8) and dialyzed against phosphate-buffered saline (PBS) . To purify various Ab3s from monkey sera, all 3C9 immune sera were initially diluted 1:1 with PBS. The diluted serum was then passed over an affinity column of normal mouse immunoglobulin-conjugated Sepharose. The flow-through fraction was collected and set aside. After washing, the bound antibody (anti-isotype Ab) was washed, eluted with citrate buffer, and dialyzed against PBS.
  • PBS phosphate-buffered saline
  • the Ab3 was passed over a gpl20 SF -Sepharose affinity column, and the column was washed extensively.
  • the bound antibody (gpl20-specific Ab3) was eluted with citrate buffer and dialyzed against PBS.
  • RIA gpl20 SF2 and gpl20 IIIB were labeled with 125 I by using a Bolton-Hunter Reagent Kit (NEN) .
  • RIA plates (Dynatech) were coated for 18 hr with various amounts of antibody in PBS. The plates were washed and then blocked for one hr with PBS containing 1% bovine serum albumin (BSA) .
  • BSA bovine serum albumin
  • 125 I-labeled gpl20 IIIB or gpl20 SF2 in PRS containing 10% (vol/vol) fetal calf serum and 0.05% Tween 20 was added in the presence or absence of different concentrations of inhibitors. After 3 hr, the plates were washed with PBS and the bound radioactivity was determined in a gamma counter.
  • microtiter plates were coated overnight with 0.25 ug of protein in PBS per well. After the adherent layer was blocked and washed, different concentrations of antibody in PBS were added to the plates. Alkaline phosphatase- coupled goat anti-human immunoglobulin and phosphatase
  • SUBSTITUTESHEET substrate (Sigma) were used to detect antibodies binding to the plates.
  • Applicant generated a series of anti-idiotypic antibodies against purified human anti-gpl20 antibodies from a pool of four healthy HIV-1 infected donors. Briefly, anti-gpl20 antibodies were purified on gpl20 SF2 . Sepharose and used to immunize mice for hybridoma fusion. Anti-idiotype mAbs were selected for binding to human anti-gpl20 antibodies. One anti-idiotype mAb, 3C9, with specificity for CD4 site-directed anti-gpl20 antibodies, was further characterized as a candidate for induction of anti-gpl20 antibodies.
  • fPlates were coated with 0.3 ug of antibody per well. After addition of PBS containing 10% fetal calf serum to block the absorbed layer, 5 x 10 4 cpm of 125 I-labeled gpl20 SF2 or 125 I-labeled gpl20 mB was added to each well in the presence or absence of sCD4 at 50 ug/ml. After 3 hr, the plates were washed and the radioactivity was measured.
  • 3C9+ Ab was purified from HIV* human sera on a 3C9-conjugated Sepharose column, normal human immuno- globulin (hig) was from The Binding Site (San Diego) , and V3-specific human polyclonal antibodies (hAb) were purified from HIV * human sera on a V3 SF2 -conjugated Affi-Gel column as described (Kang et al. (1991) Proc. Natl. Acad. Sci USA 88, 6171-6175). ftPlates were coated with 0.25 mg of V3 SF2 peptide in PBS per well.
  • Plates were coated with 2 ug of antibody per well. After addition of PBS containing 10% fetal calf serum to block the adsorbed layer, 1.5 x 10 5 of 125 I-labeled gpl20 SF2 was added to each well in the presence or absence of inhibitors. After 3 hr, the plates were washed, the radioactivity was assayed, and the percent inhibition was calculated.
  • Monkey Ab3 antibodies were further fractionated on a gpl20 SF2 -Sepharose affinity column. The flowthrough and bound fractions were collected as non-gpl20-specific Ab3 and gpl20-specific Ab3, respectively. These antibodies were then examined for gpl20 binding activity.
  • Table 5 shows that all gpl20-specific Ab3 from four monkeys bound to gpl20, whereas non-gpl20-specific Ab3 did
  • RIA plates were coated with different amounts of purified anti-gpl20 Ab3 for 18 hr with various amounts of antibody in PBS. The plates were blocked with 1% BSA in PBS, and 1 x 10 5 cpm of 125 I-labeled gpl20 SF2 was added to each well. After 3 hr, the plates were washed and the radioactivities were measured. NT, not tested.
  • gpl20-specific Ab3 antibodies produced by monkey PR0703 were isolated from a pool of sera obtained after the second, third, fifth, and sixth immunizations.
  • gpl20-specific Ab3 antibodies from monkey PR0783 were isolated from a pool of sera obtained after the second, third, fifth, sixth, and seventh immunizations.
  • Ab3 antibodies from monkeys PR0419 and PR0431 were isolated from a pool of sera obtained after the fourth and fifth immunizations.
  • the neutralizing activity was assessed by comparing the amount of p24 in the well of the test antibody with that in the control well. All experiments were performed in triplicate. ND, not done.
  • SUBSTITUTESHEET 3C9 can stimulate clones of primary B cells to produce broadly neutralizing HIV-1 antibodies.

Abstract

A novel method is disclosed for selecting antibody reagents for vaccine formulations that are capable of inducing group-neutralizing anti-HIV antibody responses in humans. Also disclosed are anti-idiotype antibodies and hybridoma cell lines capable of producing such antibodies. Further, anti-idiotype antibody-based vaccines and formulations thereof are disclosed. The methods, antibodies, hybridomas and vaccine formulations of the present invention may be useful in the treatment and prevention of HIV infection.

Description

DESCRIPTION
Methods for Selecting Antibody Reagents?
Anti-idiotype Antibodies; and
AIDS Vaccine Formulations
Field of the Invention
The present invention relates generally to the field of immunology and, more particularly, to novel methods of selecting for therapeutically useful antibodies. Further, the present invention relates to novel anti-idiotype anti¬ bodies and vaccine formulations thereof that are useful in the immunotherapy and prevention of HIV infection.
Background of the Invention
It is widely accepted that the Human Immunodeficiency Virus (HIV) is the principal etiological agent of the acquired immunodeficiency syndrome (AIDS) . From a clini¬ cal standpoint, depletion of CD4+ lymphocytes can account for most of the severe immunologic abnormalities in AIDS patients (Fauci, et al . (1984) Am . Int . Med . 100:92). The tropism of HIV is dependent primarily upon a specific interaction between the gpl20 envelope glycoprotein of HIV and the CD4 receptor molecule on target cells, e.g., T lymphocytes and macrophages, although it has been sug¬ gested that other molecules on some cells are involved in similar interactions with HIV. Beyond the primary inter¬ action between CD4 and gpl20, the following steps are postulated to be essential for HIV entry into target cells: anchorage of the virus to the cell membrane; fusion with the cell membrane; and penetration of the viral elements into the cell. Any reagent that interferes with these steps is considered to block the virus infec¬ tion and is of potential therapeutic value. Such reagents under current investigation include antibodies, which are generally functionally described as "neutralizing antibodies."
SUBSTITUTESHEET Amino acid sequence analysis of various HIV isolates from a single patient as well as different patients indicates that gpl20 contains hypervariable regions inter¬ spersed among highly conserved regions. This finding indicates that HIV variation in vivo can occur rapidly during the chronic infection. The degree of diversity among different strains of HIV within the gpl20 molecule may be due in part to natural selection during interac¬ tions with the host immune system. Antibodies that bind to hypervariable regions of the HIV envelope generally only react with a single isolate or strain of the virus: such antibodies are termed "type-specific." At present, about 20 different strains of HIV have been identified. For example, antibodies directed against one of these hypervariable regions of gpl20 known as the "V3 loop" will neutralize HIV. However, this effect has generally been type-specific; i.e., it is well documented that among anti-gpl20 antibodies, those specific to the V3 loop may exert a neutralizing effect on only a single isolate or strain of HIV. Moreover, a single amino acid mutation in the V3 region allows the virus to escape neutralization by such antibodies. Although the precise role of the V3 domain in virus infection is still in question, several reports have demonstrated that antibodies to this region neutralize virus infectivity by interfering with a post- binding event (Skinner, et al. (1988) J. Virol . 62:4194). Whatever the V3 region's role may be in virus infection, its variability from strain to strain and high mutation frequency make it an uncertain target for immunotherapy. Despite the considerable sequence variation and hypervariability within gpl20, all known HIV isolates share a common functional characteristic—the ability to bind to and infect CD4+ cells. This observation leads to a basic premise that the CD4 attachment site on gpl20 includes one or more conserved domains. Accordingly, antibodies binding to this CD4 attachment site could be expected to prevent viral infections and to interact fully
SUBSTITUTESHEET with various HIV isolates via their ability to bind to conserved regions of gpl20. Antibodies that bind to conserved regions of HIV and recognize multiple strains of the virus are termed "group-specific." Thus, antibodies that will neutralize multiple strains of HIV are said to be capable of group-specific neutralization. These neutralizing antibodies would play an important role in preventing viral infection (Weiss, et al . (1985) Nature 316:69) as well as killing HIV-infected cells via antibody-dependent cell-mediated cytotoxicity (Rook, et al . (1987) J. Immunol . 138:1064) and complement-mediated cytolysis. It has been well documented that antibodies specific to the conserved region exist in the sera of HIV- infected humans (Schmittman, et al . (1988) J . Immunol . 141:4181; Moore, J.P. (1990) AIDS 4:297). Therefore, an HIV vaccine which induces antibodies capable of group- specific neutralization may be effective in producing a clinical improvement in AIDS patients and preventing infection in healthy people. Although the clinical correlation between neutral¬ izing antibody titer and disease progression has not been well defined, recent reports suggest that the presence of maternal antibodies to gpl20 correlates positively with the uninfected status of children born to seropositive mothers (Rossi, et al . (1989) Proc . Natl . Acad . Sci . 86:8055; Devash, et al . (1990) Proc . Natl . Acad . Sci . 87:3445). However, as most HIV-seropositive individuals have a high titer of anti-HIV antibodies as well as demon¬ strable levels of neutralizing antibodies, it remains unresolved as to why so many of these people have a rapidly progressive infection. In attempting to answer this question, Applicant has noted in the literature that high titers of type-specific neutralizing antibody in HIV- infected individuals are not sufficient to neutralize continuously emerging new isolates brought about by muta¬ tions of gpl20 (Nara, et al . (1990) In Vaccines 90:137, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY).
SUBSTITUTESHEET On the other hand, titers of group-specific neutralizing antibodies in HIV-infected individuals, which are specific against conserved regions, are low. It is, therefore. Applicant's premise that HIV vaccines must be evaluated with respect to their ability to induce high titers of group-specific neutralizing antibodies.
Although the need for a HIV vaccine is clear and the objective rationally conceived, the vaccine strategies adopted have been diverse and, to date, unsuccessful. Most HIV vaccine development strategies have been based on preparations including whole or portions of the major envelope protein. Native, recombinant, synthetic, vaccinia-encoded envelope proteins and whole inactivated virus have been prepared and tested. For example, chimpanzees were immunized with the HIV envelope protein encoded in a vaccinia virus. The animals produced both humoral (antibody) and cellular (T-cell) immune responses specific for the envelope protein; however, these primates were not protected from infectious challenge with HIV (Hu, et al . (1989) Nature 328:721) .
Kennedy and colleagues, using synthetic peptides which represent conserved immunodominant epitopes of gp41, immunized chimpanzees with a peptide carrier conjugate made from the synthetic peptides (Kennedy, et al . (1989) In Vaccines 250, Cold Spring Harbor, NY) . Subsequent challenge with HIV, however, showed that the animals were not protected against infection. The use of killed whole virus vaccine (Salk, J. (1987) Nature 327:473) may be able to induce protection, but to the extent these vaccines contain envelope, this protection is expected to be only type-specific and does not circumvent the problem with the envelope polymorphism (Hahn, et al. (1986) Science 23:1548) . According to a recent report (Berman, et al . (1990) Nature 345:622) , immunization of primates with recombinant gpl20, induced neutralizing antibodies and elicited
SUBSTITUTE HEET protective immunity against homologous strains of HIV. Still, there was no evidence that such immunization could provide protective immunity against different HIV strains or even mutated homologous isolates. Antibody based vaccine approaches have also been investigated. For example, the use of anti-idiotype antibodies ("anti-ids") as vaccines against various infec¬ tious agents ("antigens") (so-called idiotype vaccines) is well documented. To date, most idiotype vaccine develop- ment strategies have been based on the following prepara¬ tions and principles. First, to generate monoclonal anti-ids (Ab2s) , animal Abls (in most cases antibodies from non-human sources have been used) have been utilized as immunogens or templates. Second, monoclonal Abls have been used as templates in the majority of cases. Third, the in vitro selection of Ab2s as vaccine candidates was driven by the concept of antigen mimicry by anti-ids (Ab2s) ; i.e.. the principle of blocking the interaction of Abl with Ab2 by antigen has been used as the controlling criteria for selecting Ab2 vaccine candidates. Such anti- idiotype antibodies have become know in the art as "Ab2 β" or "internal image" Ab2s. Two other types of Ab2s gener¬ ated against Abls have been designated: Ab2 λ, which block antigen binding to Abl, but are not internal images of the antigen; and Ab2 α, which bind to the Abl, but do not block binding of the antigen to Abl. See FIGURE 1. Fourth, to further define Ab2s as vaccine candidates in vivo, non-primate animals have generally been used as animal models to evaluate the Ab3 response. Despite the tremendous financial and human resources that have been dedicated to the discovery of an effective AIDS vaccine, the results have been inconclusive at best. The reasons for these apparent failures are unclear, but some of these studies indicate that broadly reactive anti- HIV neutralizing antibodies were not generated in suffi¬ cient titer in the experimental animals, allowing HIV to "escape" the immune response.
SUBSTITUTESHEET Summary of the Invention
The present invention is based on Applicant's dis¬ covery of a novel method for selecting antibody reagents for vaccine formulations that are capable of inducing group-neutralizing anti-HIV antibody responses in humans. In its broadest embodiment, the present invention is directed to a method of selecting monoclonal anti-idiotype antibody reagents useful in vaccine formulations for the treatment or prevention of HIV infection. The first step in this method requires preparing human polyclonal anti- gpl20 antibodies (Abls) and subsequently generating a first group of monoclonal anti-idiotype antibodies (Gl- Ab2s) capable of reacting with or immunologically binding with the human polyclonal anti-gpl20 antibodies. Then, from this first group of monoclonal anti-idiotype antibodies (Gl-Ab2s) , a second group or subset of monoclonal anti-idiotype antibodies (G2-Ab2s) are selected that are characterized by their ability to immunologically bind gpl20 antibodies that neutralize in vitro multiple strains of HIV. Finally, the second group of monoclonal anti-idiotype antibodies (G2-Ab2s) is screened for a subset or a third group of monoclonal anti-idiotype antibodies (G3-Ab2s) which are characterized by their ability to generate an anti-anti-idiotype antibody (Ab3) response in a primate host, wherein the anti-anti-idiotype antibody (Ab3) immunologically binds with gpl20 and neutralizes in vitro multiple strains of HIV.
In a preferred embodiment of the invention, the Abls are prepared from pooled human sera from HIV-positive asymptomatic individuals and purified by passing over a gpl20 column to increase the concentration of anti-gpl20 antibodies. Also preferred is the generation of murine monoclonal Ab2s.
The present invention is further directed broadly to monoclonal anti-idiotype antibodies that are capable of eliciting a group neutralizing anti-HIV antibody response in humans. The present invention is also directed to
S monoclonal anti-idiotype antibodies (G3-Ab2s) selected according to the methods described herein.
The present invention is further directed to vaccine formulations including the monoclonal anti-idiotype antibodies (G3-Ab2s) disclosed herein.
Thus, it is an object of the present invention to develop a method for selecting antibody reagents useful in vaccine formulations which are capable of eliciting in vivo high titers of group-specific neutralizing antibodies against HIV in humans.
It is a further object of the present invention to develop antibody reagents per se that are useful in vac¬ cine formulations and the cell lines capable of producing such antibodies.
Brief Description of the Drawings
FIGURE 1 graphically illustrates the concepts of "idiotype matching" (1A) and "idiotype mimicry" (IB) .
FIGURE 2 shows that the flowthrough fraction of Total Anti-gpl20 Abs bound to gpl20IIIB and not to gpl20SF2. FIGURE 3 shows that the Total Anti-gpl20 Abs bound to gpl20IIIB and not to gpl20SF2.
FIGURE 4 graphically depicts the purification of Total Anti-gpl20 Abs.
FIGURE 5 illustrates the effective inhibition of 125I-labeled gpl20SF2/ CD4 by CD4-site antibodies.
FIGURE 6 depicts HIV virus neutralizing activity of CD4-site antibodies.
FIGURE 7 depicts HIV virus neutralizing activity of non-V3 antibodies. FIGURE 8 lists the first group of anti-idiotype antibodies and the characteristics of corresponding Abls. FIGURE 9 summarizes the characterization of corresponding Ab3s against candidate Ab2 vaccines in monkeys. FIGURE 10 summarizes the neutralizing activity of Ab3 isolated from 3C9 immunized monkeys.
SUBSTITUTESHEET FIGURE 11 depicts neutralizing activity of human 3C9+Ab against HIV laboratory strains (Left) and patient primary HIV isolates (Right) .
FIGURE 12 depicts the binding of gpl20SF2 (Left) and gpl20IIIB (Right) to purified Ab3 from monkeys PR0703 and PR0783.
Detailed Description of the Preferred Embodiments
The present invention is based on Applicant's novel anti-idiotype (anti-id or Ab2) approach to developing an HIV vaccine that possesses the critical biological prop¬ erty of eliciting group-specific neutralizing antibodies. Although the Applicant does not wish to be bound by any particular theory, the present invention is driven by the concept of "idiotype matching" rather than the prior art concept of "antigen mimicry" by anti-ids.
"Idiotype matching" utilizes anti-ids as surrogates for antigen, e.g.. in an attempt to stimulate specific elements of the B cell repertoire in humans. In contrast to the prior art, which focus exclusively on idiotype mimicry and Ab2B, the anti-id vaccine candidates of the present invention may be Ab2 A, B, or λ as long as they elicit group neutralizing Ab3 responses. Compare, FIGURE 1A and FIGURE IB.
In short, most prior art anti-idiotype vaccine development strategies have been based upon antigen mimicry and the resulting principles:
(1) To generate monoclonal anti-ids, non-human Abls have been utilized as templates.
(2) Monoclonal Abls have been used as templates in the majority of cases.
(3) The in vitro assays used to select Ab2s as vaccine candidates have generally been based on the concept of antigen mimicry by anti-ids (Ab2B) .
(4) To further define Ab2s as vaccine candidates in vivo, non-primates have been the animal model of choice.
SUBSTITUTESHEET Notwithstanding the scientific momentum created by these teachings in the art, Applicant developed an entirely new approach for the selection of anti-id vac¬ cines. Some of the preferred features and advantages of Applicant's invention include the following:
(1) Human Abls, preferably purified from sero- positive healthy individuals, are used as templates to generate Ab2s. This choice of starting material increases the likelihood that the Ab2-based vaccine will generate Ab3s in humans that are immunologically equivalent to the human Abls with respect to antigen binding potential, i .e . , anti-HIV binding. This feature of the invention takes advantage of the fact that Applicant knows that B cell repertoires pre-exists in humans that are capable of producing Abl-like Ab3s (so called Abl') In contrast, using a murine Abl assumes that the B cell repertoire of the mouse is genetically and immunologically equivalent to the human B cell repertoire—possibly a fatal flaw for vaccine development. (2) Polyclonal Abls rather than monoclonal Abls are used as templates to generate Ab2s. This feature of the invention eliminates the possibility that an individual monoclonal Abl (which represents only one epitope) selected for use as a templates does not represent a highly conserved HIV epitope.
(3) Applicant has discovered that the definition of Ab2 B and the evaluation of Ab3 responses in non-primate animals are not the critical factors in selection of an Ab2 as a vaccine candidate. In contrast, Applicant has discerned the following criteria for the selection of anti-idiotype vaccines: (a) Abls (which react with the Ab2 vaccine candidate) from the human sera exhibit desirable biological effects in vitro (e . g . , virus neutralization) . Ergo , Ab3s generated in vivo in primates, including humans, in response to an Ab2 vaccine are expected to have Abl-like biological effects. (b) Ab2s induce group-specific neutralizing Ab3s in primates.
SUBSTITUTESHEET The principal advantages in using Applicant's anti-id approach to select an HIV vaccine are threefold. First, selected anti-ids elicit only beneficial anti-gpl20 anti¬ bodies (e.g., group-specific neutralizing antibodies). Second, anti-ids elicit high titers of certain anti-gpl20 antibodies. Third, the biological properties of anti- gpl20 antibodies elicited by these Ab2 are predictable.
Thus, in its broadest embodiment, the present invention is directed to a method of selecting monoclonal anti-idiotype antibody reagents that are useful in vaccine formulations for the treatment and prevention of HIV infection. The first step in this method involves the preparation of human polyclonal anti-gpl20 antibodies (Abls) that are to be used as templates to generate Ab2s. It is preferred that the human polyclonal anti-gpl20 antibodies are obtained from human sera of HIV-positive, asymptomatic individuals. It is further preferred that such sera is purified to increase the representation of anti-gpl20 antibodies by passing the pooled human sera over a gpl20 column. It is also contemplated by the present' invention that the total anti-gpl20 antibodies will be passed over not one but two gpl20 columns, wherein each gpl20 column represents a different strain of gpl20. It is most preferred that the human polyclonal anti-gpl20 antibodies represent the total anti-gpl20 antibodies. Alternatively, the total anti-gpl20 antibody population can be dissected into fractions for use in the present invention: CD4 attachment site-specific anti-gpl20 antibodies, V3 region-specific anti-gpl20 antibodies or non-V3 region-specific anti-gpl20 antibodies.
The second step of the method of the present invention involves the generation of a first group of monoclonal anti-idiotype antibodies which are capable of reacting with the human polyclonal anti-gpl20 antibodies prepared in the first step of the method. Preferably, these anti-idiotype antibodies are urine monoclonal antibodies generated by conventional hybridoma technology.
SUB As used herein, the term "monoclonal" is intended to encompass antibodies derived from a single clone as well as mono-specific antibodies derived by molecular biology techniques. Alternative sources of anti-idiotype antibodies contemplated by the present invention include human, primate, chimeric, and humanized antibodies, as well as antibodies synthesized by molecular biology techniques. As used herein, the term "antibody" is intended to include whole antibodies, antibody fragments, Fab fragments, single chain antibodies, and immuno¬ logically functional antibody equivalents.
Once the first group of monoclonal anti-idiotype antibodies have been generated, the third step in the method of the present invention involves screening this first group of antibodies for a second group (subset of first group) of monoclonal anti-idiotype antibodies that are characterized by their ability to react with or immunologically bind anti-gpl20 antibodies that neutralize in vitro multiple strains of HIV. In a preferred embodiment, the anti-gpl20 HIV neutralizing antibodies are human. In a most preferred embodiment, these human anti- gpl20 HIV neutralizing antibodies are human antibodies selected from the pool of human polyclonal antibodies prepared according to the first step of the method. As used herein, neutralization of more than two strains of HIV is considered to be "multiple" strain neutralizing. These anti-gpl20 antibodies may be selected by passing the human polyclonal antibody preparation made in the first step of the method over an Ab2 (group 1) column, and selecting those anti-gpl20 antibodies that are capable of in vitro neutralization of multiple strains of HIV.
The present invention is also directed to antibodies, in particular, to monoclonal anti-idiotype antibodies that are capable of eliciting a group- neutralizing anti-HIV antibody response in humans. Preferred are monoclonal anti-idiotype antibodies selected according to the selection method described above.
SUBSTITUTESHEET Hybridoma cell lines are also an aspect of the present invention. In particular, hybridoma cell lines capable of producing a monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans. The most preferred is the hybridoma cell line deposited with the ATCC, Rockville, MD on March 8, 1991, designated accession no. HB10701. In addition to the antibodies produced by this hybridoma, the present invention includes monoclonal antibodies capable of eliciting a substantially equivalent immune response in humans as a monoclonal antibody produced by the hybridoma cell lines described above. Preferably, such a monoclonal antibody would react with and compete for binding to the same anti-gpl20 antibody as a monoclonal antibody produced by the hybridoma cell lines described above.
An additional embodiment of the invention is the development of vaccine formulations including, in mixture with a pharmaceutically acceptable carrier, a monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans. Vaccine formulation, including selection of appropriate adjuvants and carriers, is well known to those of skill in the art. Once formulated, a vaccine's dosimetry would be based upon patient and clinical factors that are well appreciated by those of skill in the art of vaccine deliv¬ ery. The vaccines of the present invention may be either prophylactic or therapeutic in nature. Although a single anti-idiotype antibody reagent vaccine is desirable, it is contemplated by the present invention that multiple anti- idiotype antibodies may be formulated in a "cocktail" vaccine approach. Again, clinical factors will dictate the vaccine formulation and dosage. However, a preferred vaccine formulation would include about 2.5 mg of an antibody of the present invention formulated with about 100 ug of termutide and SAF (Syntex adjuvant formulation — 2.0 mg polysorbate 80, 12.5 mg Poloxy er 401, and 50 mg
SUBSTITUTESHEET squalane) . An alternative formulation may exclude the termutide component.
EXAMPLE 1A Preparation of Starting Materials—Human Polyclonal Total Anti-gpl20 Antibodies. Total anti-gpl20 antibodies (anti-gpl20SF2) ("Total Anti-gpl20 Abs") were purified from human sera by affinity chromatography using a gpl20SF2-Sepharose column. Recombinant gpl20SF2 was derived from engineered CHO cells. A pool of sera from HIV-infected asymptomatic individuals (purchased from North American Biologicals, Inc., Miami, Florida 33169) were inactivated by detergent (1% NP40) and heat (l hr. at 56°C) treatment. The sera was dialyzed against PBS and ammonium sulfate (40% as final concentra¬ tion) was added to the sera to isolate the immunoglobulin fraction. The precipitated immunoglobulin fraction was reconstituted with PBS, filtered and applied to the gpl20SF2-Sepharose column. The bound Total Anti-gpl20 Abs on the column were eluted with pH 3.0 glycine buffer and dialyzed against PBS. The recovery of total anti-gpl20 antibodies in sera was approximately 300 μg/ml.
Antibodies binding to gpl20SF2 are expected to consist of two kinds: (a) SF2 type-specific antibodies, and (b) antibodies binding to conserved regions of gpl20 such as the CD4-attachment site. Since the individuals contribut- ing to the Ig pool might have been infected with a variety of HIV strains, the flowthrough fraction may bind to gpl20 derived from strains other than SF2. Indeed, as shown in FIGURE 2, Applicant found that the flowthrough fraction bound to gpl20IIIB, not to gpl20SF2 indicating the presence of IIIB type-specific anti-gpl20 antibodies in the flow¬ through fraction. In addition, Total Anti-gpl20 Abs bound to both gpl20SF2 and gpl20IIIB (FIGURE 3) t indicating the presence of a mixture of type-specific and cross-reactive anti-gpl20 antibodies. Applicant then investigated the neutralizing activi¬ ties of Total Anti-gpl20 Abs against various HIV isolates.
SUBSTITUTESHEET FIGURE 2 shows that Total Anti-gpl20 Abs exhibited neutralizing activities against four different HIV isolates, although their neutralizing activities against the different HIV isolates varied as much as 10-50 fold, indicating that Total Anti-gpl20 Abs contains signifi¬ cantly different populations and amounts of type- and group-specific neutralizing antibodies. From these results, Applicant reasoned that the difference in the neutralizing activities of Total Anti-gpl20 Abs against the various viral isolates could be explained by (a) strain-to-strain differences in the amount of anti-gpl20 antibodies required for neutralization of each virion, and (b) the presence of type- or group-specific neutralizing antibodies. To demonstrate the presence of type-specific neutralizing antibodies in Total Anti-gpl20 Abs, Applicant tested the binding of Total Anti-gpl20 Abs to type- specific neutralizing epitopes derived from the V3 region of different gpl20s.
Table 1
Binding Activities of Different Anti-gpl20 Antibody
Preparations To Peptides Derived From the V3 Region of
Various gp!20s
Binding Activities* Anti-gpl20
Antibodies Origin of Peptides
MN IIIB RF SC WMJ-2
Total Anti- gpl20 Abs >3 1.05 0.06 0.8 1.48
CD4-site Abs 0.15 0.01 0.01 0.03 0.01
♦Binding activities are expressed by O.D. obtained at 5Jg/ml of each preparation. Table 1 shows that Total Anti-gpl20 Abs bind extensively to the MN isolate derived epitope, less extensively to the IIIB, SC and WMJ-2 derived epitopes and weakly to the RF-derived epitope. Thus, the highest binding activities of Total Anti-gpl20 Abs against the MN- derived epitope is consistent with the fact that Total Anti-gpl20 Abs exhibited the highest neutralizing activi¬ ties against the MN isolate. However, it is interesting to note that the binding activity of Total Anti-gpl20 Abs to the RF-derived epitope was only slightly above back¬ ground, despite the fact that Total Anti-gpl20 Abs effectively neutralized the RF isolate. This could be explained by the presence of group-specific neutralizing antibodies specific against non-V3 epitopes.
EXAMPLE IB Preparation of CD4 Site Attachment Site- Specific Polyclonal Anti-gpl20 Antibodies from Human Sera
Isolation and Characterization of CD4 Attachment Site- Specific Anti-gpl20 Antibodies
Since Applicant observed group-specific neutralizing activities with Total Anti-gpl20 Abs, it was of interest to determine the epitope specificity of anti-gpl20 anti¬ bodies which are responsible for these group-specific neutralizing activities. Since antibodies to the con¬ served CD4 attachment site of gpl20 are considered to be the major group-specific neutralizing epitope, Applicant devised the following strategy. The approach to isolate CD4 attachment site-specific anti-gpl20 antibodies (CD4- site Abs) from Total Anti-gpl20 Abs consisted of saturat¬ ing the CD4-attachment site on gpl20 immunoabsorbent with sCD4 and followed by applying Total Anti-gpl20 Abs to the immunoabsorbent in the presence of excess sCD4. The flowthrough fraction of the antibodies were collected and applied to a protein G column to isolate the IgG fraction from sCD4. This is graphically depicted in FIGURE 4. To ensure complete removal of the sCD4 from the IgG fraction,
SUBSTITUTESHEET Applicant analyzed this preparation by SDS gel electro- phoresis and ELISA, using a monoclonal anti-CD4 antibody, and could not detect any sCD4 by either method.
To isolate the CD4 attachment site-specific anti- gpl20 antibodies, 10 mg of sCD4 in PBS was repeatedly loaded on the gpl20SF2-Sepharose column to saturate the CD4 attachment site onto the gpl20. Then, 4 mg of Total Anti- gpl20 Abs with 10 mg of sCD4 in PBS was loaded onto the column. The flowthrough fraction was further separated on a protein G column (Pharmacia Fine Chemicals, Piscataway, NJ) to isolate the IgG fraction. SDS gel electrophoresis and ELISA, using a monoclonal anti-CD4 antibody, were employed to verify that the isolated IgG was free of sCD4. To examine whether the IgG fraction contains CD4-site Abs, Applicant performed competitive inhibition assays on CD4+ cells using 125I-labeled gpl20SF2 and CD4-site Abs. FIGURE 5 shows that CD4-site Abs effectively inhibited binding of 1 5I-labeled gpl20SF2 to CD4 cells. The approxi¬ mate IC50 of CD4-site Abs in this assay was ten times less than that of sCD4. Applicant observed almost the same results with 125I-labeled gpl20IIIB. This result indicated that this IgG fraction contained significant amounts of CD4-site Abs. To determine what proportion of this IgG fraction are CD4-site Abs, various anti-gpl20 antibodies were coated on microtiter plates and incubated with 125I- labeled gpl20SF2 in the presence or absence of sCD4.
SUBSTITUTESHEET Table 2
Proportion of CD4 Attachment Site-Specific Antibodies in
Different Anti-gpl20 Antibody Preparations
Anti-gpl20 Proportion* Antibodies as %
Total Anti-gpl20 Abs 16
CD4-site Abs 71
Non-V3 Abs 32
V3-Region Abs 0 *The percent inhibition by sCD4 in each anti-gpl20 antibody binding to gpl20 was calculated. The largest percent inhibition was considered to be the proportion of .CD4 attachment site-specific anti-gpl20 antibodies.
Table 2 shows that sCD4 inhibited the binding of CD4- site Abs to gpl20SF2 by 71%, whereas only 16% of Total Anti-gpl20 Abs binding to gpl20sp2 was inhibited by sCD4. This result indicated that our purification significantly enriched CD4-attachment site-specific anti-gpl20 anti¬ bodies; however, these antibodies still contained substantial amounts of non-CD4 attachment site-specific anti-gpl20 antibodies. In an attempt to determine the specificities of the contaminating antibodies in CD4 site Abs, Applicant tested the binding of CD4 site Abs to synthetic peptides derived from the V3 domain of different HIV isolate gpl20s. Table 1 shows that CD4 site Abs bound only weakly to the MN isolate-derived epitope and not to the other isolate-derived epitopes. This finding demon¬ strates that the purification for CD4-site Abs removes most of the V3 region-specific anti-gpl20 antibodies. Since Applicant found that CD4-site Abs contain mainly CD4-attachment site-specific anti-gpl20 antibodies with minimal amounts of MN isolate specific neutralizing antibodies, Applicant investigated whether CD4-site Abs could neutralize different HIV isolates. As shown in FIGURE 6, CD4-site Abs exhibited almost the same extent of neutralizing activities against three different HIV isolates. Compared with CD4 site Abs, Total Anti-gpl20
SUBSTITUTESHEET Abs exhibit much higher neutralizing activities against the MN isolate, a little higher against the RF isolate and almost the same against the IIIB isolate. From the fact that CD4 site Abs effectively neutralized three different HIV isolates at or near equivalent antibody concentrations despite low or no binding activities against identical V3 specific peptides, Applicant concluded that CD4-site Abs exhibit mainly non-V3 group-specific neutralizing activi¬ ties, whereas, Total Anti-gpl20 Abs exhibit type- and group-specific neutralizing activities. Applicant util¬ ized these CD4-site Abs to generate murine monoclonal anti-ids.
EXAMPLE 1C. Preparation of Anti-gpl20 Antibodies Depleted of Type-Specific Neutralizing Antibodies Another approach for identifying group-specific neutralizing antibodies was to deplete type-specific neutralizing antibodies from TAGA, using a column of V3 peptide Affi-Gel 401 and test this preparation for group- specific neutralizing activities. To separate the anti-gpl20 antibodies depleted of V3 region-specific antibodies (non-V3 Abs) from Total Anti- gpl20 Abs, a mixture of two peptides (8 mg of each) derived from the V3 region of gpl20SF2 (see peptides for sequence) were coupled to 10 ml of Affi-Gel 401 (Bio-Rad, Richmond, CA) . See method below. The peptides were syn¬ thesized on an automated peptide synthesizer (model 430A, Applied Biosystems, Foster City, CA) by solid phase method. The peptides were deprotected and cleaved from the support with HF/anisole or the "low-high" HF proce- dure. The sequences of two SF2-derived peptides for an affinity column were as follows; V3SF2: TRPNNNTRKSIYIGPGRAFHTTGRI IGDIRKAHC and CTRPNNNTRKSIYIGPGRAFHTTGRIIGDIRKAHC. The sequences of various V3 region peptides for binding assays were as follows; MN_ YNKRKRIHIGPGRAFYTTKNIIG, IIIB: NNTRKSIRIQRGPGRAFVTIGKIG, RF: NNTRKSITKGPGRVIYATGQIIG,
SUBSTITUTESHEET SC : NNTTRSIHIGPGRAFYATGDI IG , WHJ-2 : NNVRRSLSIGPGRAFRTREGN. Ten g of Total Anti-gpl20 Abs in PBS was repeatedly loaded on the peptide Affi-Gel column. The flowthrough, consisting of anti-gpl20 antibodies depleted of V3 region-specific antibodies (non-V3 Abs) , was collected. SF2 V3 region-specific anti-gpl20 anti¬ bodies (V3-region Abs) were eluted with pH3 glycine buffer.
Peptide Coupling 1. Derivatization of the Affinity Support
An aliquot of Affi-Gel 401 affinity support was reduced with 100 mM dithiothreitol for 1 hour at room temperature. The resin was then transferred to a sintered glass funnel and washed extensively with argon-saturated phosphate buffered saline.
The reduced resin was then transferred to a 15 ml conical tube and diluted with 10 ml of argon-saturated phosphate buffered saline. The bis-maleimidomethyl ether in ethanol was added to the resin in a 100 fold molar excess of maleimide over sulfhydryls. The reaction was allowed to proceed overnight at 1-8°C with rotation in a sealed tube. The resin was subsequently transferred to a sintered glass funnel and washed extensively with argon- saturated PBS in order to remove excess reagent. Unreacted sulfhydryls were blocked by the addition of n-ethylmaleimide in ethanol in a sealed tube with rotation at 2-8°C overnight.
2. Reduction of Peptide and Coupling to the Derivatized Support Reduction of the C terminal cysteine was effected by the addition of 100 mM DDT with incubation for 2 hours at room temperature. The reduced peptide was separated from reductant by adsorption to a Sep-Pak C-18 apparatus, washed with argon-saturated PBS, and eluted directly into the support in solution with 95% CH3CN. Coupling was
SUBSTITUTESHEET allowed to take place overnight at 2-8°C with rotation in a sealed tube. Following the coupling, the resin was washed with PBS in order to remove excess peptide.
Both bound and flowthrough fractions were tested in virus neutralization assays. FIGURE 7 shows that non-V3 Abs exhibited almost the same extent of neutralizing activities against three different HIV isolates. However, V3 region Abs exhibited strong neutralization activities against the MN isolate, minimal activities against IIIB and no activity against RF. Based on these observations, Applicant concluded that the neutralizing activities of non-V3 Abs are group-specific while the neutralizing activities of V3 region Abs are type-specific. This result indicates that the majority of neutralizing activity of Total Anti-gpl20 Abs to IIIB and RF isolates (FIGURES 7a, 7b) are derived from group-specific neutral¬ izing activities of the non- V3 Abs fraction, whereas, most of the neutralizing activity of Total Anti-gpl20 Abs to the MN isolates (FIGURE 7c) are derived from type- specific neutralizing antibodies in the V3 region Abs fraction. Furthermore, by comparison of neutralizing activities of V3 region Abs and non-V3 Abs on MN isolate
(FIGURE 7c) , Applicant concluded that V3 region Abs are more effective than non-V3 Abs neutralizing antibodies in neutralizing a specific isolate.
Conclusions on Preparation of Anti-gpl20 Antibodies in Examples 1A. IB. and 1A
Applicant has dissected the neutralizing activities of various polyclonal anti-gpl20 antibodies present in a pool of serum from 4 HIV-infected individuals to under¬ stand the role of these antibodies in the host defense against HIV infection. The major findings of this study are as follows: (i) Total Anti-gpl20 Abs exert type- and group-specific neutralizing activities; (ii) the group- specific neutralizing activity is found primarily in CD4- site Abs; (iii) if other group-specific neutralizing
SUBSTITUTESHEET antibodies rather than CD4- site Abs exist, they are not specific against a simple linear epitope of the V3 domain;
(iv) V3 region Abs are more effective than non- V3 Abs in neutralizing a specific HIV isolate. Although neutralizing efficacy of CD4-site Abs is relatively low, it is reasonable to assume that an HIV vaccine which induces high titers of CD4 site Abs should be effective in producing a clinical improvement in AIDS patients and preventing infection against various HIV isolates in healthy people.
EXAMPLE 2A Generation of First Group of Anti-id Mabs and Characterization for their Ability to React with Human Polyclonal Anti-gpl20 Antibodies.
Generation of anti-id Mabs was accomplished by fusing sp2 murine myeloma cells with splenocytes from mice which were immunized 2-3 times with polyclonal anti-gpl20 anti¬ bodies. In screening assays, anti-id was selected for (i) binding to polyclonal human anti-gpl20 antibodies, (ii) not binding to any specific isotype standard antibody, (iii) no binding to Ig preparation of the same pool of sera depleted of Total Anti-gpl20 Abs by absorption on a gpl20SF2-Sepharose column.
Immunizations
BALB/c mice were immunized with TAGA and the various other fractions of polyclonal anti-gpl20 antibodies purified from a pool of four sera from HIV-infected indi¬ viduals as described in EXAMPLES 1A-C. All immunizations were done by two S.C. injections of 50 micrograms of anti¬ body in SAF-MDP adjuvant at two week intervals, followed by a single i.p. injection of 50 micrograms of antibody in incomplete Freunds adjuvant ("IFA") 3 days prior to fusion. Spleen cells were fused with SP2 myeloma cells and hybrids were selected in HAT medium. Culture super¬ natant were tested by ELISA. Positive clones were
SUBSTITUTESHEET subcloned twice. Anti-id Mabs were purified from the ascites on Protein A-Sepharose columns.
ELISA Assay for Hybridoma Screening
For hybridoma screening assays, microtiter wells were coated with 300 ng of the following human Igs in PBS: Different anti-gpl20 antibodies used for immunizations; Ig preparations of the same pool of sera depleted of Total Anti-gpl20 Abs by absorption on a gpl20SF2-Sepharose column; and myeloma proteins representing all different isotypes of human heavy and light chains (The Binding Site, San Diego, CA) . Culture supernatants were tested for their binding activities to the antibody coated plates. Alkaline phosphatase-coupled goat anti-mouse Ig and phosphatase substrate (Sigma, St. Louis, MO) were used to detect antibodies binding to coated plates.
EXAMPLE 3A. Selection of a Second Group of Anti-IDS from the First Group of Anti-IDS Based on in vitro Characterization
Characterization of anti-id Mabs was necessary to identify appropriate antibodies for the next level of experiments. For this procedure, a unique approach to define Ab2s as vaccine candidates in vitro was employed. The underlying principals are based on "idiotype matching" rather than the antigenic mimicry of anti-id (Ab2B) . Therefore, the isolation of the corresponding Abls to individual Ab2s from human sera and their evaluation was a crucial step. Thus, Applicant isolated the correspond¬ ing Abls using an Ab2-Sepharose column and tested the Abls for binding activity to gpl20 and neutralizing activity against multiple strains of HIV. Then, Ab2s which inter¬ act with group-specific neutralizing Abls were selected for primate studies. See FIGURE 8.
SUBSTITUTESHEET Preparation of Id+Abs (Abls)
Anti-id Mabs were conjugated to Sepharose 4B by mixing 8 mg of antibodies with 5 ml of CNBr-activated Sepharose 4B (Pharmacia, Piscataway, NJ) . Then, 20-60 ml of the same sera pool used for various anti-gpl20 antibody preparation was loaded to anti-id Mab-Sepharose 4B columns. After washing extensively, bound antibodies (Abl Ids) were eluted with citrate buffer ph2.8 and dialyzed against PBS.
ELISA
An ELISA plate was coated overnight with 0.2 ml of 0.5 μg/ml of gpl20SF2 or gpl20IIIB (SmithKline Beecham, King of Prussia, PA) in 0.1 M bicarbonate buffer pH 9.8. The plate was washed three times with PBS and blocked for 1 hr. with 10% FCS in PBS. After washing, various concen¬ trations of Abls were added. Two hours later, the plate was washed and biotin-coupled goat anti-human Ig and avidin-coupled peroxidase was used for detecting antibody binding to the ELISA plate.
Neutralization assay
A quantitative neutralization assay of HIV by anti- gpl20 antibody was conducted as previously described (Nara, et al . (1988) Nature 332:469). The virus stocks of HIV isolates were grown in H9 cells and harvested for optimal viral infectivity and aliquoted and frozen at -140°C in a vapor phase cryo unit. Equivalent amounts of virus (syncytial-forming unit) were used in the assays so as to allow for comparison of the various antibody fraction tested. The assays are repeatable over a virus surviving fraction range of 1 to 0.001 within a two to four fold dilution of the antibody (p≤O.001).
SUBSTITUTESHEET EXAMPLE 4A. Selection of Third Group of Anti-IDS from the Second Group Based on AB3 Response in Primates
Demonstrations of HIV Vaccine Activity of Anti-Id Mabs
To identify anti-id Mabs with potential utility in eliciting group-specific neutralizing anti-gpl20 anti¬ bodies, cynomolgus monkeys were used. Monkeys were immunized with anti-id Mab/Syntex Adjuvant Formulation ("SAF") (Syntex Corp., Palo Alto, CA) emulsion, each given at two week intervals. After the fourth immunization, blood samples were taken and sera were isolated and used to prepare Ab3 preparation on Ab2 affinity column. .Applicant next examined whether Ab3 binds to gpl20.
Ab3 binding to gpl20
To test gpl20 binding activity of Ab3, gpl20SF2 and gpl20IIIB were iodinated by Bolton-Hunter reagent (ICN Biochemical, Cleveland, OH) and lactoperoxidase (Bio-Rad, Richmond, CA) respectively. Microtiter plates were coated for 18 hours with lμg of Ab3 in PBS. After washing, the plates were blocked for one hour with 1% BSA in PBS, 10,000 cpm of gpl20SF2 or gpl20IIIB were added to wells and incubated for 3 hours. After washing three times, each well was counted.
HIV Neutralization
For neutralizing assays, Ab3 was further purified on gpl20-Sepharose affinity column to enrich gpl20 specific Ab3s. Applicant then tested whether gpl20 specific Ab3s neutralize multiple strains of HIV.
Two quantitative neutralization assays of HIV were performed, as previously described (Nara, et al . (1988) Nature 332:469). Briefly, target cells of the CEM-SS cell line were infected in monolayers by different HIV isolates grown in H9 cells, in the presence of Ab3s. After 7-12 days in culture, syncitia forming units were counted, and supernatants were assayed in ELISA for p24 concentration.
SUBSTITUTESHEET As shown in FIGURES 9 and 10, Applicant found that Ab3s isolated from the sera of 3C9 immunized monkeys bind to gpl20 and the purified gpl20-specific Ab3s neutralize three distinctive HIV isolates.
EXAMPLE 4B. Characterization of 3C9 as Active
Immunotherapy Reagent Immunizations
Four Cynomolgus monkeys received intramuscular injections with 2.5 mg of 3C9 in 1 ml of SAF (Syntex adjuvant formulation) containing 0.6 mg of N-acetylmuramyl-L-alanyl-D-isoglutamine (MDP) . The injections were administered bi-weekly. Animals were bled before the injection series and seven days after each injection.
Recombinant Proteins gpl20IIIB is a recombinant glycoprotein of an HIVIIIB isolate which is secreted from a Drosophilia cell line. gpl20SF2 is a recombinant envelope glycoprotein of an HIVSF2 isolate which is secreted from Chinese hamster ovary (CHO) cells. The gpl20IIIB and gpl20SF2 are readily available to those of skill in the art. Recombinant soluble CD4 (sCD4) was prepared by transfection of a truncated CD4 gene into CHO) cells. Secreted sCD4 in culture supernatants of CHO cells (representing 95% of the amino-terminal extracellular portion of the molecule) was purified on an anti-CD4 antibody conjugated Sepharose column.
Affinity Purification of Antibodies
All affinity columns were prepared by conjugating 8 mg of protein with 5 ml of CNBr-activated Sepharose 4B (Pharmacia) . To purify the 3C9-reactive antibody (3C9+Ab) from pooled sera of healthy HIV-infected individuals (Kang, et al . (1991) Proc . Natl . Acad. Sci . USA 88, 6171- 6175), heat (56°C, lhr)- and detergent (1% Nonidet P-40)-
SUBSTΠΓUTE SHEET treated sera were applied to a 3C9-conjugated Sepharose affinity column. After being washed extensively, bound antibodies (3C9+Abs) were eluted with citrate buffer (pH 2.8) and dialyzed against phosphate-buffered saline (PBS) . To purify various Ab3s from monkey sera, all 3C9 immune sera were initially diluted 1:1 with PBS. The diluted serum was then passed over an affinity column of normal mouse immunoglobulin-conjugated Sepharose. The flow-through fraction was collected and set aside. After washing, the bound antibody (anti-isotype Ab) was washed, eluted with citrate buffer, and dialyzed against PBS. Subsequently, the Ab3 was passed over a gpl20SF-Sepharose affinity column, and the column was washed extensively. The bound antibody (gpl20-specific Ab3) was eluted with citrate buffer and dialyzed against PBS.
RIA gpl20SF2 and gpl20IIIB were labeled with 125I by using a Bolton-Hunter Reagent Kit (NEN) . RIA plates (Dynatech) were coated for 18 hr with various amounts of antibody in PBS. The plates were washed and then blocked for one hr with PBS containing 1% bovine serum albumin (BSA) . 125I-labeled gpl20IIIB or gpl20SF2 in PRS containing 10% (vol/vol) fetal calf serum and 0.05% Tween 20 was added in the presence or absence of different concentrations of inhibitors. After 3 hr, the plates were washed with PBS and the bound radioactivity was determined in a gamma counter.
ELISA
To test the binding activity of 3C9+Abs to a V3 region-derived peptide (amino acids 301-338 of gpl20SF2) , microtiter plates were coated overnight with 0.25 ug of protein in PBS per well. After the adherent layer was blocked and washed, different concentrations of antibody in PBS were added to the plates. Alkaline phosphatase- coupled goat anti-human immunoglobulin and phosphatase
SUBSTITUTESHEET substrate (Sigma) were used to detect antibodies binding to the plates.
Neutralization Assays
Two quantitative neutralization assays with HIV-1 laboratory stains were performed, as previously described (Nara & Fischinger. (1988) Nature .London) 332, 469-470: Whalley et al. (1992) Viral Immunol.. 4, 201-213). Briefly, monolayers of CEM-SS target cells were cultured with different HIV strains, in the absence or presence of different neutralizing antibodies. After 3-5 days in culture, syncytia-forming units were counted and in the same assay, supernatants were assayed in ELISA for p24 concentration 7-12 days later. Neutralization assays with HIV primary isolates were performed as described (Daar et aL. (1990) Proc. Natl. Acad. Sci. USA 87, 6574-6578).
Property of Anti-Idiotvpic mAb 3C9 as Candidate for Clonotypic Stimulation
Using the methods described above. Applicant generated a series of anti-idiotypic antibodies against purified human anti-gpl20 antibodies from a pool of four healthy HIV-1 infected donors. Briefly, anti-gpl20 antibodies were purified on gpl20SF2. Sepharose and used to immunize mice for hybridoma fusion. Anti-idiotype mAbs were selected for binding to human anti-gpl20 antibodies. One anti-idiotype mAb, 3C9, with specificity for CD4 site-directed anti-gpl20 antibodies, was further characterized as a candidate for induction of anti-gpl20 antibodies. Pooled human HIV-1+ sera were purified on a 3C9 immunoabsorbent and eluted antibodies (3C9+Ab) were tested for binding to gpl20 and V3 loop peptides. The results (Table 3), show that 3C9+Ab bound to two genetically distinct gpl20s derived from HIVSF2 and HIVIIIB and did not bind to the V3 loop peptide. Furthermore, 3C9+Ab binding to gpl20 was inhibited by sCD4, indicating that 3C9+Ab is specific for an epitope around the CD4
SUBSTITUTESHEET attachment site of gpl20. Next, the biological function of 3C9+Ab was examined in virus neutralization assays. Human 3C9+Ab exhibited different spectra of broadly neutralizing activities against genetically distinct HIV laboratory strains and four primary isolates established from HIV-infected individuals. See Fig. 11. Collectively, these results indicate that anti-idiotype mAb 3C9 recognizes a clonotypic determinant shared by human polyclonal anti-gpl20 antibodies that are specific for a conserved epitope around the CD4 attachment site and exhibit broadly neutralizing activities. By this definition, 3C9 defines a marker on B cells producing neutralizing anti-gpl20 antibodies.
SUBSTITUTESHEET Table 3.
Immunological Properties of Human 3C9-Reactive
Antibodies (3C9+ Ab)
Binding activity of 3C9+ Ab in assays cpm in RIA with 125I-OP120+
A in ELISA
Figure imgf000031_0001
fPlates were coated with 0.3 ug of antibody per well. After addition of PBS containing 10% fetal calf serum to block the absorbed layer, 5 x 104 cpm of 125I-labeled gpl20SF2 or 125I-labeled gpl20mB was added to each well in the presence or absence of sCD4 at 50 ug/ml. After 3 hr, the plates were washed and the radioactivity was measured.
3C9+ Ab was purified from HIV* human sera on a 3C9-conjugated Sepharose column, normal human immuno- globulin (hig) was from The Binding Site (San Diego) , and V3-specific human polyclonal antibodies (hAb) were purified from HIV* human sera on a V3SF2-conjugated Affi-Gel column as described (Kang et al. (1991) Proc. Natl. Acad. Sci USA 88, 6171-6175). ftPlates were coated with 0.25 mg of V3SF2 peptide in PBS per well. After addition of PBS containing 1% BSA to block the absorbed layer, 1 ug of antibodies per ml of PBS were added to the plates. Alkaline phosphatase-coupled goat anti-human Ig and phosphatase substrate were used to detect antibodies binding to the plates. Absorbance was measured at 405 nm.
SUBSTITUTESHEET 3C9 mAb Induces Anti-gpl20 Ab3 Antibodies
To test whether 3C9 elicit anti-gpl20 antibodies, four cynomolgus monkeys were immunized with 3C9 mAb in Syntex adjuvant formulation. Since the immune serum was expected to contain 3C9-specific antibodies (Ab3) and mouse immunoglobulin-specific antibodies (anti-isotype Ab) , it was fractionated on successive affinity columns and tested for binding to gpl20. Ab3 from two monkeys bound to gpl20SF2 in an antibody concentration-dependent manner and to gpl20IIIB in an antigen concentration- dependent manner, whereas anti-isotype Abs did not bind to either type of gpl20. See Fig. 12. Similar results were obtained with Ab3s from two other monkeys (data not shown) . Inhibition assays were performed to analyze the specificity of Ab3. The results in Table 4 show that gpl20 binding of Ab3 from monkeys PR0703 and PR0783 were inhibited by 3C9 anti-idiotype mAb (Ab2) , human 3C9+Ab (Abl), sCD4. Similar results were obtained with Ab3s from other monkeys (data not shown) . These results confirm the anti-clonotypic nature of 3C9 as it is able to induce in primates gpl20-specific Ab3 with similar specificity to the human anti-gpl20 antibodies (3C9+Ab) purified on 3C9 immunoadsorbent (See Table 3) .
SUBSTITUTESHEET Table 4 Inhibition of Ab3 Binding to gpl20SF2 by Various
Inhibitors
Figure imgf000033_0001
Plates were coated with 2 ug of antibody per well. After addition of PBS containing 10% fetal calf serum to block the adsorbed layer, 1.5 x 105 of 125I-labeled gpl20SF2 was added to each well in the presence or absence of inhibitors. After 3 hr, the plates were washed, the radioactivity was assayed, and the percent inhibition was calculated.
*3C9+ Ab was purified from HIV+ human sera on a 3C9- conjugated Sepharose column.
fAt this concentration, sCD4 did not inhibit V3 region- specific antibody to gpl20SF2, as previously described.
Monkey Ab3 antibodies were further fractionated on a gpl20SF2-Sepharose affinity column. The flowthrough and bound fractions were collected as non-gpl20-specific Ab3 and gpl20-specific Ab3, respectively. These antibodies were then examined for gpl20 binding activity. The data in Table 5 shows that all gpl20-specific Ab3 from four monkeys bound to gpl20, whereas non-gpl20-specific Ab3 did
SUBSTITUTESHEET not. This finding indicates that only a fraction of Ab3 recognized gpl20 and also suggests that the gpl20-specific Ab3 from all four monkeys had a range of affinities for gpl20. For example, gpl20-specific Ab3 of PR0703 exhibited a 3 to 4-fold higher binding to gpl20 than that of gpl20-specific Ab3 from the other three monkeys.
Table 5 Binding of gpl20-Specific Ab3 Antibodies to gpl20
Figure imgf000034_0001
For the binding assays, RIA plates were coated with different amounts of purified anti-gpl20 Ab3 for 18 hr with various amounts of antibody in PBS. The plates were blocked with 1% BSA in PBS, and 1 x 105 cpm of 125I-labeled gpl20SF2 was added to each well. After 3 hr, the plates were washed and the radioactivities were measured. NT, not tested.
SUBSTITUTESHEET Neutralizing Activity of gp!20-Specific Ab3
Finally, Applicant examined the HIV-1 virus neutralizing activities of gpl20-specific Ab3 antibodies. Table 6 summarizes the results. The gpl20-specific Ab3 from PRO703 neutralized MN, IIIB and RF strains of HIV-1. The gpl20-specific Ab3 from PR0431 strongly neutralized the RF strain, and weakly neutralized the MN and IIIB strains. The gpl20-specific Ab3 from PR0419 and PR0783 neutralized RF and MN, respectively. The lower or limited neutralizing activity of the gpl20 specific Ab3s from PR0419, PR0431 and PR0783 may be due to lower affinity against certain gpl20s. The gpl20 binding activity of gpl20-specific Ab3 from these monkeys was considerably lower than that of gpl20-specific Ab3 from PR0703 (Table 5) .
SUBSTITUTESHEET Table 6. Neutralizing Activity of gpl20-Specific Ab3 Antibodies Isolated From 3C9 Immune Primate Sera
Figure imgf000036_0001
gpl20-specific Ab3 antibodies produced by monkey PR0703 were isolated from a pool of sera obtained after the second, third, fifth, and sixth immunizations. gpl20- specific Ab3 antibodies from monkey PR0783 were isolated from a pool of sera obtained after the second, third, fifth, sixth, and seventh immunizations. Ab3 antibodies from monkeys PR0419 and PR0431 were isolated from a pool of sera obtained after the fourth and fifth immunizations.
The neutralizing activity was assessed by comparing the amount of p24 in the well of the test antibody with that in the control well. All experiments were performed in triplicate. ND, not done.
Collectively, the results from binding and virus neutralization studies on antibodies isolated from the sera of 3C9-immunized non-human primates demonstrate that
SUBSTITUTESHEET 3C9 can stimulate clones of primary B cells to produce broadly neutralizing HIV-1 antibodies.
SUBSTITUTESHEET

Claims

Claims
1. A method of selecting monoclonal anti-idiotype antibody reagents useful in vaccine formulations for the treatment or prevention of HIV infection, comprising the steps of:
(a) preparing human polyclonal anti-gpl20 antibodies (Abls) ;
(b) generating a first plurality of monoclonal anti- idiotype antibodies (Ab2s) that immunologically binds with said human polyclonal anti-gpl20 antibodies;
(c) selecting a second plurality of monoclonal anti- idiotype antibodies from said first plurality of antibodies, wherein said second plurality of antibodies are characterized by their ability to immunologically bind with anti-gpl20 antibodies that neutralize in vitro multiple strains of HIV; and
(d) selecting a third plurality of monoclonal anti- idiotype antibodies from said second plurality antibodies, wherein said third plurality antibodies are characterized by their ability to generate an anti-anti-idiotype anti¬ body (Ab3) response in a primate host, wherein said anti- anti-idiotype antibody immunologically binds with gpl20 and neutralizes in vitro multiple strains of HIV.
2. The method of claim 1, wherein said human polyclonal anti-gpl20 antibodies are pooled human sera from HIV positive, asymptomatic individuals.
3. The method of claim 2, wherein the said pooled human sera is purified for anti-gpl20 antibodies by pass¬ ing said pooled human sera over a column with gpl20 bound to a stationary phase of said column and selecting, by elution, the bound fraction of anti-gpl20 antibodies.
4. The method of claim 1, wherein said first plurality of monoclonal anti-idiotype antibodies are murine.
SUBSTITUTESHEET
5. The method of claim 1, wherein said anti-gpl20 antibodies of step (c) are human.
6. The method of claim 1, wherein said anti-gpl20 antibodies of step (c) are human antibodies selected from said human polyclonal antibodies of step (a) .
7. The method of claim 6, wherein said anti-gpl20 antibodies of step (c) are selected by passing said human polyclonal antibodies of step (a) over a column with an anti-idiotype antibody from said first plurality of antibodies bound to a stationary phase of said column, eluting bound fraction of anti-gpl20 antibodies and selecting from said bound fraction those anti-gpl20 antibodies that are capable of neutralizing in vitro multiple strains of HIV.
8. A monoclonal anti-idiotype antibody selected according to the method of claim 1.
9. A monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans.
10. A hybridoma cell line capable of producing a monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans.
11. A hybridoma cell line deposited with the ATCC, Rockville, MD, under accession No. HB 10701.
12. A monoclonal antibody produced by the cell line of claim 11.
13. A monoclonal antibody which elicits a substantially equivalent immune response in humans as a
SUBSTITUTESHEET monoclonal antibody produced by the hybridoma cell line of claim 10 or 11.
14. A monoclonal antibody which reacts with and competes for binding to the same anti-gpl20 antibody as a monoclonal antibody produced by the hybridoma cell line of claim 10 or 11.
15. A vaccine formulation comprising, in admixture with a pharmaceutically acceptable carrier, a monoclonal anti-idiotype antibody that is capable of eliciting a group neutralizing anti-HIV antibody response in humans.
16. A vaccine formulation comprising, in admixture with a pharmaceutically acceptable carrier, an antibody of claim 8 in a dose sufficient to induce an active immune response in humans.
17. A vaccine formulation comprising, in admixture with a pharmaceutically acceptable carrier, an antibody of claim 9" in a dose sufficient to induce an active immune response in humans.
18. A vaccine formulation comprising, in admixture with a pharmaceutically acceptable carrier, an antibody of claim 12 in a dose sufficient to induce an active immune response in humans.
19. A vaccine formulation comprising, in admixture with a pharmaceutically acceptable carrier, an antibody of claim 13 in a dose sufficient to induce an active immune response in humans.
20. A vaccine formulation comprising, in admixture with a pharmaceutically acceptable carrier, an antibody of claim 14 in a dose sufficient to induce an active immune response in humans.
SUBSTITUTESHEET
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US6780847B2 (en) 1995-04-27 2004-08-24 The United States Of America As Represented By The Department Of Health And Human Services Glycosylation-resistant cyanovirins and related conjugates, compositions, nucleic acids, vectors, host cells, methods of production and methods of using nonglycosylated cyanovirins
US7048935B2 (en) 1995-04-27 2006-05-23 The United States Of America As Represented By The Department Of Health And Human Services Cyanovirin conjugates and matrix-anchored cyanovirin and related compositions and methods of use
US7339037B2 (en) 2001-03-22 2008-03-04 The United States Of America As Represented By The Department Of Health And Human Services Glycosylation-resistant cyanovirins and related conjugates, compositions, nucleic acids, vectors, host cells, methods of production and methods of using nonglycosylated cyanovirins
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US7754420B2 (en) 1995-04-27 2010-07-13 The United States Of America As Represented By The Department Of Health And Human Services Methods of using cyanovirins to inhibit viral infection
US6420336B1 (en) 1995-04-27 2002-07-16 The United States Of America As Represented By The Department Of Health And Human Services Methods of using cyanovirins topically to inhibit viral infection
US6428790B1 (en) 1995-04-27 2002-08-06 The United States Of America As Represented By The Secretary Department Of Health And Human Services Cyanovirin conjugates and matrix-anchored cyanovirin and related compositions and methods of use
US6193982B1 (en) 1995-04-27 2001-02-27 The United States Of America As Represented By The Department Of Health & Human Services Anti-cyanovirin antibody with an internal image of gp120, a method of use thereof, and a method of using a cyanovirin to induce an immune response to gp120
US6743577B2 (en) 1995-04-27 2004-06-01 The United States Of America As Represented By The Department Of Health And Human Services Methods of using cyanovirins to inhibit viral infection
US6780847B2 (en) 1995-04-27 2004-08-24 The United States Of America As Represented By The Department Of Health And Human Services Glycosylation-resistant cyanovirins and related conjugates, compositions, nucleic acids, vectors, host cells, methods of production and methods of using nonglycosylated cyanovirins
US7048935B2 (en) 1995-04-27 2006-05-23 The United States Of America As Represented By The Department Of Health And Human Services Cyanovirin conjugates and matrix-anchored cyanovirin and related compositions and methods of use
US7339037B2 (en) 2001-03-22 2008-03-04 The United States Of America As Represented By The Department Of Health And Human Services Glycosylation-resistant cyanovirins and related conjugates, compositions, nucleic acids, vectors, host cells, methods of production and methods of using nonglycosylated cyanovirins
AT410637B (en) * 2001-06-01 2003-06-25 Igeneon Krebs Immuntherapie USE OF POLYCLONAL IMMUNOGLOBULINES
US8367061B2 (en) 2007-01-30 2013-02-05 Pomona Ricera S.R.L. Anti-idiotype monoclonal antibodies mimicking the HIV gp120 CD4-binding (CD4bs)
US9200063B2 (en) 2008-03-17 2015-12-01 Pomona Ricerca S.R.L. Monoclonal antibodies capable of reacting with a plurality of influenza virus A subtypes
US9587011B2 (en) 2008-03-17 2017-03-07 Pomona Ricerca S.R.L. Monoclonal antibodies capable of reacting with a plurality of influenza virus A subtypes
US9243054B2 (en) 2008-05-27 2016-01-26 Pomona Ricerca S.R.L. Monoclonal antibodies having homosubtype cross-neutralization properties against influenza A viruses subtype H1
US8623363B2 (en) 2008-12-22 2014-01-07 Pomona Ricerca S.R.L. Anti-HCV monoclonal antibody as a medicament for the therapeutic treatment and prevention of HCV infections
US8486406B2 (en) 2009-06-01 2013-07-16 Pomona Ricerca S.R.L. Monoclonal antibodies as a medicament for the therapeutic and/or prophylactic treatment of swine-origin influenza A (H1N1) virus (S-OIV) infections

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