WO1989009782A1 - New anti-receptor peptides and therapeutic agents - Google Patents

New anti-receptor peptides and therapeutic agents Download PDF

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Publication number
WO1989009782A1
WO1989009782A1 PCT/US1988/003612 US8803612W WO8909782A1 WO 1989009782 A1 WO1989009782 A1 WO 1989009782A1 US 8803612 W US8803612 W US 8803612W WO 8909782 A1 WO8909782 A1 WO 8909782A1
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peptide
receptor
sequence
cysteine
hiv
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PCT/US1988/003612
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French (fr)
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Lee Eiden
Peter L. Nara
Blair Fraser
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United States Of America, Represented By The Secre
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Publication of WO1989009782A1 publication Critical patent/WO1989009782A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/705Receptors; Cell surface antigens; Cell surface determinants
    • C07K14/70503Immunoglobulin superfamily
    • C07K14/70514CD4
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2740/00Reverse transcribing RNA viruses
    • C12N2740/00011Details
    • C12N2740/10011Retroviridae
    • C12N2740/16011Human Immunodeficiency Virus, HIV
    • C12N2740/16111Human Immunodeficiency Virus, HIV concerning HIV env
    • C12N2740/16122New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes

Definitions

  • the present invention is related generally to synthesis of peptide based antireceptors.
  • Antireceptors are fragments of receptor proteins, or derivative of such fragments, which include the ligand-binding region of the receptor protein, and which therefore act to block the interaction of ligands and their receptors by binding to the ligand and preventing its attachment to the native receptor molecule.
  • the present invention is related to fabrication by automated solid-phase peptide synthesis, and acid cleavage of the peptide from the solid-phase resin under controlled conditions, to produce a peptide mixture comprising authentic desired peptide, and deleted and/or derivatized (partially deprotected) congeners of these peptides which may, due to steric constraints or increased nonspecific binding, have a higher affinity for the receptor ligand than the unmodified peptide sequence itself.
  • the process of fabricating antireceptors comprises synthesis of a series of peptides spanning the entire theoretical binding area of a given protein receptor molecule, and testing post-resin peptide mixtures to identify and select, by further purification, peptide derivatives which can function as antireceptors.
  • the formation of the ligand- receptor dyad is believed to be the first step in the initiation of biological response, such as viral infection, signal transduction, cell proliferation, cell fusion ad the like.
  • the present invention takes advantage of the proposition that synthetically designed molecules or agents which possess high affinity for binding to ligands, specifically at their receptor-binding epitopes, would block the interaction of the ligand to the receptor, thereby inhibiting the initiation of biological responses caused by the ligand.
  • an object of the present invention to synthesize modified or unmodified receptor fragments, or mixture thereof, which specifically block the interaction of the receptor with its ligand or ligands, that is to act as antireceptors. It is a further object of the present invention that in cases where there are multiple ligands for a single receptor, which ligands may interact with dif ferent specific regions of the receptor, that such antireceptors would inhibit selectively the interaction of one, or one class, of ligands for the receptor, without affecting the interaction between the receptor and other (or other classes) of ligands.
  • the drug design includes sparing class II cytotoxicity or deleting class II B-activation.
  • Fig. 1.A-C show the appearance of CEM-SS cells following inoculation with HTLV-IIIB, in the presence or absence of continuous treatment with peptide CD4(83- 94)BZL, and are photomicrographs (25X) of individual microtiter wells from a typical CEM-SS assay demonstrating HTLV-IIIB induced syncytium in the presence and absence of CD4(83-94)BZL.
  • Fig. 1A illustrates microtiter well containing virus-induced syncytia after one hour inoculation with HTLV-IIIB in the absence of peptide followed by removal of virus and cell culture for five days.
  • V O 150.
  • the peptide preparation CD4(83-94)BZL was incubated with the virus inoculum for 60 minutes after which the peptide-virus reaction mixture was incubated with the adherent
  • Virus-peptide- containing medium was removed and replaced with fresh complete medium containing CD4(83-94)BZL at the same concentration.
  • the number of syncytia listed above are counts taken from the entire microtiter well.
  • Fig. 2 represents chromatographic fractionation of synthetic CD4(76-94), including bioactivity, and UV-absorbing species characterized by FAB-Mass spectrometry.
  • a typical chromatogram of 1.8 mg of CD4(76-94) on a Vydac C8 (10 ⁇ 250 mm) bonded-phase semi-preparative column is shown. Material was post-resin CD4(76-94) dissolved in 10 mM ammonium acetate at pH 7.0. Mobile phase was (A) ammonium acetate buffer and (B) 20% ammonium acetate buffer/80% acetonitrile. The percentage of B in the mobile phase was varied as shown (dashed line).
  • Bioactivity (hatched bar) is expressed as doses of anti-syncytial activity per fraction.
  • One dose is the smallest amount of material necessary to completely inhibit fusion between 50,000 HTLVIIIB/H9 cells and 50,000 VB indicator cells over a twenty-four hour period under standard assay conditions.
  • Fig. 3a is an FAB mass spectrograph of major peak No. 4 of the chromatogram of Figure 3.C, discussed below.
  • Fig. 3b is an FAB mass spectrograph of major peak No. 7 of the chromatogram of Figure 3.C, discussed below.
  • Fig. 3c represents chromatographic fractionation of S-benzylCD4(83-94).
  • Post-resin material from the synthesis of S-benzyl-CD4(83-94) was employed.
  • the desired peptide was TYIC bzl EVEDQKEE where C bzl indicates benzylation of cysteine 86 by insertion of 5-Boc-S-benzyl cysteine in place of 5-Boc-S-p-methylbenzyl cysteine in the solid-phase automated synthesis sequence yielding a peptide derivatized at cysteine with a benzyl moiety following HF cleavage of the peptide from the solid-phase resin. 10 mg of the post-resin peptide mixture was applied to the semipreparative column under the conditions described in Fig. 2.
  • Fig. 4 shows the effects of CD4(1-25) on infection of CEM-SS cells in vitro by various HIV isolates. Numbers in parenthesis are the number of syncytia per well in untreated wells.
  • ligand and receptor as used herein indicate two members of a binding dyad wherein the "ligand” is the component whose binding to the receptor is inhibitable by addition of the antireceptor peptide because the antireceptor peptide binds to the ligand, replacing receptor in the ligand-receptor dyad, and the "receptor” is that region of a molecule (before and after derivatization) which defines an epitope responsible for binding of the ligand and based on which the anti-receptors are tailored.
  • a single macro molecule may have several epitopic sites, hence have several receptor subtype binding domains within the same molecular configuration for binding of several different ligands.
  • anti-viral agent means an agent which is at least in part a polypeptide or a derivative thereof (including conjugate, analog and the like) which inhibits either viral infection or viral induced cell fusion.
  • substantially pure as used herein means the product is as pure and homogeneous as can be obtained by employing standard techniques well known to one of ordinary skill in the art.
  • CD4 (Leu3A/T4) molecule is present on the surface of a subset of human T-lymphocytes which help cytotoxic- and B-lymphocytes during class II-restricted immune response to foreign antigen.
  • the CD4 molecule is also the receptor by which the human immunodeficiency virus (HIV) binds to T-lymphocytes and infects these cells. Since the cloning and sequence of CD4 have been accomplished, this receptor was selected to illustrate the principles and the application of the present invention.
  • HIV human immunodeficiency virus
  • polypeptide fragments containing 7-25 amino acid sequences of the CD4 receptor extracellular domain were synthesized and tested for their ability to inhibit three CD4-mediated functions: (1) Fusion of HIV-infected and non-infected CD4-positive T-lymphoma cells; (2) Infection of CD4-positive lymphoma cells with HIV; and (3) Proliferaton of T-helper-inducer cells in the presence of allogeneic irradiated stimulator cells (the mixed lymphocyte reaction).
  • the ability of the peptide fragments to inhibit binding of a CD4 antibody which neutralizes all three of these processes, to the CD4 molecule on the surface of peripheral blood leucocytes, has also been determined in order to map the binding epitope of this antibody.
  • CD4(76-94) refers to the desired 19 residue peptide LKIEDSDTYICEVEDQKEE.
  • CD4(83-94) refers to the desired 12 residue peptide TYICEVEDQKEE.
  • S-benzyl CD4 (76-94) and S-benzylCD4(83-94) refer to the desired 19 residue peptide LKIEDSDTYIC bzl EVEDQKEE, and its 12-residue congener, in which cysteine protection via benzyl, rather than methylbenzyl, derivatization during solid-phase synthesis yields a final peptide product in which the cysteine residue remains protected (S-benzylated) after HF cleavage.
  • CD4(83-94)BZL Material possessing ability to inhibit HIV-induced cell fusion generated from 1) authentic CD4(83-94), authentic S-benzylCD4(83-94) or their 19-residue congeners, by liquid-phase benzyl or methylbenzyl alkylation, or 2) purified by HPLC of post-resin material from synthesis of S-benzylCD4( 84-94) are designated CD4(83-94)BZL or CD4(76-94)BZL.
  • unfractionated mixtures of the peptide material resulting from the solid-phase synthesis of the desired peptides are referred to as the "post-resin peptide mixture"; for example CD4(76-94) post-resin peptide mixture, or CD4(76-94) peptide mixture.
  • the compounds of the present invention are characterized by having a sequence comparable to a sequence of the CD4 molecule, in particular a sequence distal to the N-terminus.
  • the sequence includes the cysteine at position 86 of CD4 at which the sulfur on the cysteine is blocked.
  • the compound is prepared by reacting underivatized peptide under mild conditions with reagents known to react with mercaptans.
  • reagents known to react with mercaptans.
  • These reagents may be active halides, pseudohalides, active olefins, e.g., x,p-enones, such as maleimide, disulfides, or the like.
  • the derivatizing groups should provide a physiologically acceptable product.
  • the blocking groups will have from about 1 to about 36 carbon atoms and may be aliphatic, alicyclic, aromatic, heterocyclic or combinations thereof. Usually, the blocking group will have from 0 to 10 hetero-atoms, which may be in the longest chain, as a substituent on a chain or ring atom or the like. For the most part the heteroatoms will be selected from halogen, nitrogen, oxygen or sulfur. Binding of the substituent to the sulfur of the cysteine residue may be via a carbon, or heteroatoms such as nitrogen, or sulfur atom.
  • the bulk of the group immediately distal to the cysteine sulfur and attached directly to the sulfur is preferably less than that of a naphthyl group and greater than that of a linear lower alkanoic acid, most preferably approximately the size of a phenyl group or similar cyclic or heterocyclic group (either aromatic or non-aromatic).
  • the group optionally may be further substituted.
  • aryl group may be used to block the sulfur, for example, an aryl-containing substituent or a thioether resulting from the reaction between the thio group of the cysteine and a maleimide.
  • the aryl group is preferably selected from 5- and 6-membered aromatic rings containing carbon and 0-1 oxygen or sulfur and 0-3 nitrogen atoms in the ring.
  • Phenyl is a preferred aryl group, e.g., benzyl and naphythyl.
  • the aryl-containing group may be substituted or unsubstituted.
  • Substituents may include alkyl, particularly methyl, halogen, particularly chloro, nitro, etc., where the substituents may be in any position, preferably at the ortho position.
  • the aryl group may have from 0 to 3 substituents, usually not more than 2 substituents, which substituents may be the same or different.
  • the olefin will usually be conjugated with a second site of unsaturation, e.g., a carbonyl group.
  • a second site of unsaturation e.g., a carbonyl group.
  • Acyclic groups, maleimido groups, conjugated polyolefins, or the like may find use.
  • precursor disulfides will be employed which have a convenient leaving group, which is displaced by the cysteine to form a new disulfide bond.
  • intramolecular disulfides formed from another cysteine of a contiguous CD4 peptide chain are excluded.
  • reaction compounds for preparing derivatives of the CD4 molecule and fragments thereof include the following, wherein the group bound to the sulfur of cysteine 86 may be one of the following groups:
  • n 1-10 and a hydrogen on any of the ring carbons is replaced by X as described in (a) above.
  • maleimide adducts such as m-maleimidobenzoylN-hydroxysuccinimide ester; m-maleimido-benzoylsulfosuccinimide ester; N-succinimidyl4-(p-maleimidophenyl)-butyrate; N-succinimidyl4-(N-maleimido-methyl)-cyclohexane-1-carboxylate; or sulfosuccinimidyl-4-(N-maleimidomethyl) cyclohexane-1-carboxylate; bismaleimidohexane; bismaleimidomethyl ether; or N-Y-maleimidobutyryloxysuccinimide.
  • maleimide adducts such as m-maleimidobenzoylN-hydroxysuccinimide ester; m-maleimido-benzoylsulfosuccinimide ester; N-
  • X is N 3 ; OH; OR; NH 2 ; NHR; NO 2 ; SH; SR; halogen;
  • R-S- where R is alkyl or substituted alkyl.
  • cytotoxic agents such as alkylating agents, for example pipobroman; thio-TEPA; chlorambucil; cyclophosphamide; nitrogen mustard; mephalan; or uracil mustard.
  • membrane-perturbating agents for example adriamycin; ionophores, such as valinomycin; or surface active agents, such as detergents.
  • anti-retroviral agents such as 5-azidothymidine (AZT); dideoxycytidine (DDC); dideoxyadenosine (DDA); or dideoxyinosine (DDI).
  • a preferred peptide in accordance with the present invention comprises substantially the same sequence as CD4 amino acids of the sequence 85 to 92, usually 83 to 94, and more particularly 81 to 94, conveniently 76 to 94 where the sequence may be further extended by as many as 10 amino acids or more at either terminus, where the extension amino acids may be the same or different from the CD4 sequence.
  • the sequence will usually have at least greater than 2 amino acids of the natural sequence on each side of the cysteine. The numbering of the amino acids is as set forth in Maddon et al., Cell (1985) 41: 93-104.
  • the peptide sequences may be modified by terminal amino acylation, for example, acetylation; carboxy amidation, for example, with ammonia, methylamine and the like. It will be appreciated that the amino acid sequence need not correspond exactly to the sequences given above, but may be modified by from 1 to 3 conservative or non-conservative mutations, including deletions and insertions involving not more than about 1 amino acid, without significantly affecting the activity of the product. Therefore, the polypeptides may be subject to various changes, such as insertions, deletions, and substitutions, either conservative or non-conservative, where such changes provide for advantages in their use.
  • Conservative substitutions include combinations such as gly, ala; val, ile, leu; asp, glu; asn, gin; ser, thr; lys, arg; and phe, tyr, trp.
  • the sequence will not differ by more than 20% from the sequence of the epitope of the CD4 molecule except where additional amino acids may be added at either terminus for the purpose of providing an "arm" by which the peptides of this invention may be conveniently linked for immobilization.
  • the arms will usually be at least about 5 amino acids and may be 50 or more amino acids.
  • the peptides of the present invention may also be conjugated with or linked to a soluble macromolecular entity.
  • the macromolecular entity may be a polypeptide, either, naturally occurring or synthetic, to which antibodies are unlikely to be encountered at high levels in human serum.
  • Illustrative polypeptides include poly-L-lysine, bovine serum albumin, keyhole limpet hemocyanin, bovine gamma globulin and the like. The choice is primarily one of convenience and availability.
  • the conjugates will generally comprise at least one molecule of the peptide of the present invention per macromolecule and usually not more than about 1 per 0.5 kDal and preferably not more than about 1 per 2 kDal of the macromolecule. Of course, one or more different peptides may be linked to the same macromolecule.
  • Conjugation or linking may be accomplished by any conventional method employing such reagents as p-maleimidobenzoic acid, p-methyldithiobenzoic acid, maleic acid anhydride, succinic acid anhydride, glutaraldehyde and the like.
  • the linkage may occur at the N-terminus, C-terminus, or at a site intermediate to the ends of the molecule.
  • peptide may be derivatized for linking or linked while bound to a support, or the like.
  • the peptides can be prepared in a wide variety of ways.
  • the peptides because of their relatively short size, may be synthesized in solution or on a solid support in accordance with standard techniques.
  • Various automatic synthesizers are commercially available and can be used in accordance with known protocols. See for example, Stewart and Young, Solid Phase Peptide Synthe sis, 2nd Ed., Pierce Chemical Company, 1984; and Tam et al., J. Am. Chem. Soc. (1983) 105:6442.
  • hybrid DNA technology may be employed where a synthetic gene may be prepared by employing single strands which code for the polypeptide or substantially complementary strands thereof, where the single strands overlap and can be put together in an annealing medium so as to hybridize. The hybridized strands may then be ligated to form the complete gene and by choice of appropriate termini, the gene may be inserted into any suitable and readily available expression vector. See for example, Maniatis et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, 1982. Alternatively, the region of the genome coding for the peptide may be cloned by conventional recombinant DNA techniques and expressed (see Maniatis, et al, supra).
  • DNA coding sequences based upon the known sequence for CD4 may also be used to obtain the peptide. Fragments from these sequences may be employed for expression of peptide fragments, conservative base changes may also be made, where the modified sequence(s) code for the same amino acid(s), or non-conservative changes in the coding sequence may be made, where the resulting amino acid may be a conservative or non-conservative entity.
  • the coding sequence may be extended at either the 5'- or 3' - terminus or both termini to extend the peptide, while retaining its epitopic site.
  • the extension may provide for an arm for linking, for providing antigenic activity, or the like.
  • the coding sequence is provided with start and stop codons, promoter and terminator regions and usually a replication system to provide an expression vector for expression in a cellular host, for example prokaryotic or eukaryotic, bacteria, yeast, mammal and the like.
  • a replication system to provide an expression vector for expression in a cellular host, for example prokaryotic or eukaryotic, bacteria, yeast, mammal and the like.
  • the thio group may be blocked with any convenient reagent which replaces the hydrogen of the mercaptan of the cysteine.
  • active halogens, active pseudohalogens or active olefins may be used.
  • the reaction temperature may range from about 0 to about 50° C, usually 10-30° C, with the reaction time ranging from about 0.5 to 24 hours.
  • Polar solvents particularly aqueous solvents, may be employed and organic solvents may be present up to about 60 volume %.
  • Organic solvents include acetonitrile, acetone, diethyl ether, dimethyl- formamide and the like.
  • active halides a mild basic acid acceptor is usually required such as carbo- nate, bicarbonate and the like. Generally an excess of the blocking agent is employed.
  • various disulfides may be employed, such as methyldithio, p-nitrophenyldithio, 2-pyridyldithio and the like and the second sulfur may be joined to a methylcarboxy ester, aryl or other convenient group.
  • the conditions for displacement are well known to one of ordinary skill in the art and need not be illustrated here.
  • the peptides of the present invention and compositions may be used in vitro and in vivo.
  • the compounds or compositions may be employed for detecting the role of CD4 in viral infection, preventing infection of CD4-bearing cells including T cells and macrophages susceptible to HIV, inhibiting CD4-dependent viral cytopathic effects and the like.
  • the compounds or compositions of the present invention may be used prophylactically or therapeutically for preventing infection or inhibiting proliferation of the virus and infection of or cytopathic effects on additional T cells or other CD4-bearing cells by inhibiting HIV-CD4 interactions related to clinical manifestation of viral disease.
  • the composition can be made with any suitable pharmaceutically acceptable carrier and can be administered in any suitable anti-viral amount by any suitable route such as intramuscularly, intraperitoneally, intravenously, parenterally, intranasally, topically, orally and the like.
  • Any physiologically acceptable medium may be employed, such as deionized water, saline, phosphate buffered saline, aqueous ethanol, and the like.
  • the effective anti-viral amount of the active ingredient(s) will depend upon the solubility, particular use, route and frequency of administration, and the like. The amount used will also depend upon the relative antisyncytial activity of the composition employed.
  • the dosage will be in the range of about 0.2 mg to about 500 mg, preferably in the range of about 10 mg to 100 mg.
  • the following specific examples are illustrative.
  • Activation occurs in trifluoroacetic acid/dichloromethane (TFA/DCM), followed by neutralization in N,N-diisopropylethylamine/N,N-dimethylformamide (DIEA/DMF), and washing in DMF.
  • DIEA/DMF N,N-diisopropylethylamine/N,N-dimethylformamide
  • Addition of the next amino acid residue occurs by mixing in the reaction vessel (RV) the deprotected resin-linked growing chain, and activated incoming amino acid (N- and R-blocked) in DMF.
  • the activated incoming amino acid is prepared by (1) dissolution of the amino acid with alpha amin ⁇ protected with t-butyloxycarbodi imide (DCM); (2) addition of 0.5 equivalents of dicyclohexylcarbo-diimide (DCC) to form the symmetric anhydride; and (3) transfer to the concentrator and DCM/DMF exchange.
  • Dicyclohexylurea formed in the reaction is left in the activation vessel and is dissolved in methanol and discarded prior to the activation of the next amino acid in that vessel.
  • Some fragments are prepared as esters of 1-hydroxybenzotriazole (HOBT) in the activation vessel prior to the concentration and coupling. Each step ends with N-deprotection, neutralization and washing of the resin.
  • HOBT 1-hydroxybenzotriazole
  • the peptide is cleaved from the resin by treatment with HF at 0°C for two hours with stirring, with the addition as specified of anisole, thioanisole, p-cresol, dimethylsulfide (DMS).
  • HF and other volatile components were removed under vacuum, resin and peptide rinsed with ethyl ether, peptide dissolved in ammonium acetate, and resin removed by filtration.
  • the peptide mixture including side-chain protected and unprotected fulllength peptide deletion sequences, anisolated peptide, and rearranged and oxidized peptide was designated "post resin peptide X".
  • post-G-10 peptide X After dissolution in 10% acetic acid or ammonium acetate and passage over G-10 Sephadex and G-25 Sephadex, respectively, to remove low-molecular weight side products including trace amount of scavengers, the mixture was designated "post-G-10 peptide X”. After dissolution in 0.1% TFA or ammonium acetate and chromatography on reverse phase HPLC, the individual components were designated “post-HPLC peptide X peak (or fraction) Y", or simply "post-HPLC peptide X" if a peak comprised a single pure authentic peptide by amino acid analysis. Edman degrading sequencing and/or fast atom bombardment mass fragmentography (see Appendix A for specific conditions).
  • Peptides were then submitted to one or all of the following four tests. Some of the peptides were also derivatized, after purification, by incubation with alpha-bromo-toluene or alpha-bromo-xylene to obtain the benzylated adducts of cystein residues within the peptide (Erickson et al, J. Amer. Chem. Soc. 95:11, 1973).
  • a typical protocol for derivatization is as follows: About 5 mg (2.2 mol) of peptide of interest (such as H, post HPLC shown to be authentic human CD4 76-94 by FAB mass fragmentography and Edman sequencing) was placed in the flask, and about 1.5 ml triethylamine and about 1.22 mg 4-methylbenzyl bromide (6.6 mmol) was added. Reaction mixture was stirred for sufficient time (6-16 hrs.) at 25°C, vacuum evaporated for about 1.5 hrs., re-suspended in 0.01 mM ammonium acetate, pH 7.0, extracted with one volume of chloroform if necessary, and the resultant aqueous phase lyophilized. The lyophilized material was reconstituted in PBS and tested for anti-fusion activity in the assay of Lifson et al, (Nature 323:725-728, 1986).
  • peptide of interest such as H, post HPLC shown to be authentic human CD4 76-94 by FAB mass fragment
  • Syncytial Center Assay 50 ⁇ l of each peptide in PBS was mixed with 50 ⁇ l of 50-280 syncytial-forming units (SFUs) of HTLV-IIIB, RF or CC virus in RPMI 1640. Tubes were incubated at room temperature (about 22°-25°C) for 60 minutes, and 40 ⁇ l aliquots of each used to inoculate CEM cells. After an hour at 37°C, inoculum ws removed, minitray well fed 100 ⁇ l of fresh RPMI mediums, and syncytial centers scored at day 2 post-infection.
  • SFUs syncytial-forming units
  • MLR Mixed Lymphocyte Reaction
  • Table III shows the effect of anti-receptor polypeptide (H) of the present invention on syncytium formation by three different infectious viral stocks of HIV.
  • Anti-syncytial activity of deletants and altered-sequence variants of CD4cys-benzyl(75-94) define a core anti-synctyial peptide.
  • Peptides were tested as post-resin peptide mixtures as described. Anti-syncytial activity was assessed as described in the text. Not active indicates no anti-syncytial activity at early (6 hours) or late (24 hours) time points at the highest dose tested, 500 ⁇ M .
  • the anti-syncytial activity of three preparations of CD4(83-94)BZL were compared.
  • the three preparations were A. TYIC bzl EVEDQKEE, the peptide mixture obtained as described in Figure 3 by solid phase synthesis of the desired peptide TYIC(S-benzyl)EVEDQKEE, B.
  • the purified peptide S-benzyl-CD4(83-94) obtained by HPLC fractionation of the peptide mixture described in A., C.
  • CD4(76-94) Anti-syncytial activity of CD4(76-94) as Benzyl or Xylyl Derivatives.
  • Potency is expressed as the lowest concentration of the peptide mixture (nominal concentration based on mass of the input peptide and formula weight of the parent peptide LKIEDSDTYICEVEDQKEE) capable of complete inhibition of HIV HXB-2- induced cell fusion. Not active, no anti-syncytial activity at ⁇ 500 M. Table III
  • each fresh (CC) or frozen (IIIB, RF-2) viral stock was brought to room temperature, diluted 1:1 with peptide in PBS, and allowed to stand for 60 min at room temp. This mixture then added to CEM cells in micro-titre wells. Incubation at 37°C for 60 min was followed by a rinse. Cells then allowed to grow to confluent monolayer over next 48 hours. Number of syncytial centers per well counted.
  • % inhibition syncytia formation equals 1, minus the number of syncytium counted in the presence of the peptide divided by the number of syncytia in the control (untreated, infected) wells, times 100.
  • Peptide H Cleavage conditions were 1 ml thioanisole, about 20 ml HF. Tested as a post G-10 (one major peak on analytical HPLC, no other peaks visible). This material is active in the fusion assay. It has the correct sequence by Edman degradation sequencing (note no cys in this sequencing method).
  • Peptide H(r) Resynthesis of peptide H.
  • Cleavage conditions were 1 ml thioanisole, about 20 ml HF, same as for H.
  • Post resin mass spec shows molecular ion within a complex spectrum, and -HOH (dehydro) ion as well.
  • Post G-10 100 mg on, 14 mg recovered from 10% acetic acid chromatography) .
  • Mass spec post G-10 shows dehydro peak, no sign of parent peak.
  • the post G-10 H(r) showed complete inhibition of fusion at 100 M at 2 and 4 hours but some breakthrough overnight, and complete inhibition of fusion at 500 A.M 2, 4 and 24 hours.
  • Peptide Bzl H On-line benzylation, with tBoc- Cys-bz . Taken from resin with HF in two batches. First batch gave about 40 mg, active in fusion assay at 60 ⁇ M. Second batch gave about 270 mg, active in fusion assay at 120 ⁇ M.
  • TYICEVEDQKEE CD83-94
  • Peptide Bzl H8-19 Synthesis with bzl Cys instead of methylbzl Cys. Potent as crude resin at 120 ⁇ M in fusion assay.
  • a series of peptide H analogs including those with substitutions other than a benzyl group on cysteine residue number 86 were also synthesized. The following methods were employed.
  • Method 1 One and one-half mg of purified peptide H was dissoved in 120 ⁇ l acetonitrile plus 150 ⁇ l deionized water and 60 ⁇ l sodium bicarbonate (0.5 N). Acetonitrile, 200 ⁇ l , was added followed by a 40 molar excess of benzyl bromide or other reaction compound (see Table 2). The mixture was incubated at room temperature for 1 hr, then 2 ⁇ l of triethylamine was added to the reaction mixture which was further reacted at room temperature (about 22°-25°C) for 1 hr.
  • Method 2 This method is identical to Method 1 except that the addition of triethylamine was avoided in the reaction.
  • the dry powder was dissolved in PBS plus 10% tetrahydrofuran and an equal volume of chloroform. The mixture was vortexed, then the water layer and interface were collected and used for bioassay.
  • Method 3 One mg of pure peptide H was dissolved in 400 ⁇ l of 60% acetonitrile and 40-80 ⁇ l sodium bicarbonate (0.05 M). An eight molar excess of benzyl bromide or other reaction compound (see Table 4) was then added to the peptide H solution and reacted at room temperature for 6 hrs. After completion of the reaction, the product was dried by centrifugal vacuum concentration and dissolved in 5 mM sodium bicarbonate. Then one volume of PBS was added. The solution was further mixed with an equal volume of chloroform and allowed to partition by mixing of the solution. The chloroform layer was removed and the aqueous phase used for bioassay. The results are shown in Table IIIA.
  • peptide H The most effective derivatives of peptide H were those prepared using benzyl bromide, 2-chlorobenzyl bromide, 4-(N-maleimidomethyl) cyclohexane-1-carboxylic acid N-hydroxysuccinimide ester or 3-(2-pyridyldithio) propionic acid N-hydroxysuccinimide ester.
  • the two derivatives prepared using naphthyl reaction compounds were ineffective at the concentrations tested.
  • Benzyl cysteine including "N-term"-T-BOC-blocked and CBZ- blocked "N-term” blocked benzyl cysteine, had no effect on HIV-induced cell fusion at any concentration tested (up to 500 ⁇ M). Demonstration that multiple derivatization of the parent 12-mer peptide structure produces biologically active (anti-viral) material.
  • Biologically inactive, pure TYIC(benzyl)- EVEDQKEE was solution derivatized as follows: Purified S-benzyl-TYICEVEDQKEE (2.2. ⁇ mol) was dissolved in 1.5 ml triethylamine to which was added 7.12 ⁇ mol of alphabromoxylene. The solution was stirred at room temperature for 16 hours, and volatile material removed under vacuum. Remaining material was dissolved in 10 mM ammonium acetate, pH 7.0, extracted with one volume of chloroform, and repeatedly lyophilized. The resultant material was active at a nominal concentration of 250 ⁇ M in the standard fusion assay. Synthesis of Peptide E.
  • the peptide of sequence corresponding to CD4(1- 25) and including an N-terminal tyrosine residue was synthesized exactly as described for peptide H, and the post-resin peptide mixture (exactly as described for peptide H) was dissolved in phosphate-buffered saline and tested for anti-syncytial and anti-infection activity in two standard assays described herein supra.
  • the peptide mixture was without effect to inhibit HIV-induced cell fusion, but the mixture inhibited infection of CEM-SS cells as measured in the syncytial-forming quantitative microtiter assay, using four isolates of HIV-1 as shown in Figure 4.
  • the data are for peptide incubation with virus 30 minutes before inoculation, peptide presence during the 60 minute inoculation, and no peptide present during the following 5-6 days prior to counting syncytia in each cell culture well.
  • cysteine is one candidate for a residue within the sequence of CD4(76-94) that could be benzylated in the reaction performed.
  • the importance of the cysteine residue, whether derivatized or free, in generation of biological activity upon synthesis of CD4(76-94) was confirmed by the synthesis of serinyl and alanyl congeners of CD4( 83-94) and the phenylalanyl congener of CD4(76-94)amide.
  • Substitution of the amino acids serine or alanine for cysteine in otherwise identical solid-phase syntheses of CD4(76-94) or CD4(83-94) resulted in peptide mixtures without detectable anti-syncytial activity (Table 5).
  • the phenylalanyl congener of CD4( 76-94) amide was likewise inactive.
  • several peptide mixtures were synthesized as S-benzyl cysteine congeners of CD4(76-94).
  • cysteine residue is added to the growing peptide chain as t-Boc-S-benzylcysteine rather than t-Boc-S-methylbenzyl-cysteine, and remains largely S-protected after HF cleavage, compared to complete or nearly complete removal of the S-methylbenzyl block group used in the previous syntheses of CD4( 76-94).
  • the peptide mixture obtained after automated synthesis of the desired peptide S-benzylCD4(83-94) was approximately three-fold more potent to inhibit HIV-induced cell fusion than the peptide mixture obtained after synthesis of CD4(83-94) using t-Boc-S-methylbenzyl-cysteine.
  • a series of deletion peptides were synthesized using t-Boc-S-benzyl-protected cysteine, and tested as inhibitors of HIV-induced cell fusion. The results indicate that the core sequence for this biological activity is CD4(83-89) (Table 5).
  • the biological activity requires the correct sequence of the core peptide, as well as derivatization, since a nineteen-residue peptide with the same composition but slightly altered sequence compared to CD4(76-94) had no activity as an anti-syncytial agent.
  • the activity was attributable to peptide material, since proteolytic digestion completely abolished the anti-syncytial activity of the active peptide preparation.
  • a core peptide [S-benzylCD4(83-89)] retaining significant biological activity was defined.
  • CD4(76-94) at concentrations up to 500 M had no effect on HTLV-I-induced cell fusion in vitro.
  • activity appears to be restricted to inhibition of CD4 function related to viral interaction, since complete inhibition of HIV-induced cell fusion could be observed at a dose of the CD4(76-94) peptide which did not affect the MLR response (vide supra).
  • the mechanism of action of these CD4-derived peptides may involve competitive blockade of viral attachment to CD4 via peptide binding to the CD4-combining region of the HIV gpl20 glycoprotein.
  • the partially purified S-benzyl-CD4(83-94) peptide blocked fusion between HIV-infected T cells and CD4-expressing T-cell lines or CD4-expressing peripheral blood-derived cells, independent of the isolate of HIV used in the assay and also blocked the CD4-dependent fusion induced by the structurally variat simian immunodeficiency virus.
  • Each of these preparations was active in inhibiting giant cell formation between infected and non-infected CD4+ cells in vitro.
  • An active peptide could also be produced by modifying the synthesis of the authentic peptide such that a benzyl instead of a methylbenzyl protecting group was incorporated into the growing chain of cystein, affording a peptide with cystein derivative more stable to HF cleavage than the original compound. This material was also efficacious in inhibiting fusion.
  • chloroform extraction of an aqueous solution of the original synthesis of peptide H afforded at the interface of the organic/aqueous layers material which was potent and completely efficacious at 30 M to inhibit CD4+-dependent fusion between HTLV-IIIB infected and non-infected human lymphoma cells. This represented about 3-fold increase in the specific activity of the derivatized peptide H material.
  • CD4(83-94)BZL a shorter, benzylated version
  • This material was prepared and partially purified by collection of a single UV-absorbing peak after fractionation using reverse-phase (C8) chromatography.
  • CD4(83-94)BZL was tested for its ability to inhibit infection of CEM-SS cells by HTLV-IIIB (Fig. 1).
  • the IC 50 (the dose required to achieve a 50% reduction in the number of syncytia formed in peptide-treated versus virus-infected, non-treated controls) for this peptide preparation was approximately 63 ⁇ M (Fig. 1A).
  • Inhibition of infection rather than inhibition of cell fusion following infection appears to be the mechanism of action of CD4(83-94)BZL as well as the CD4(76-94) peptide mixture, since decreased numbers of syncytia were observed five to six days after viral inoculation, despite the fact that peptide was present only during the initial one-hour viral absorption step of the assay.
  • the findings presented herein now provide a "process principle" for obtaining an antiviral agent.
  • the principle is that the viral receptor is fractionated into various smaller entities. These entities are then separated and purified.
  • the purified entities, if inactive as antiviral agent, are then derivatized as described in detail herein and thus biologically active antiviral peptide derivatives are obtained.
  • a 19mer pure peptide was reduced to a 12mer pure peptide which was then converted to a S-benzyl 12mer.
  • An inactive peak 4 was then converted by solution derivatization to an active peptide peak 7 which was active as an antiviral agent at the nominal concentration of 32 ⁇ M .
  • peptide G 25mer comprising CD4 (51-75) blocks antibodies directed against CD4 molecule.
  • a 19mer molecule (such as 71-89, 72-90, 73-91, 74-92, 75-93, 76-94) could partially inhibit HIV infection; 12mer (83-94) shows antiviral property and 7mer (83-89) is the core peptide; an extension of N-terminus of CD4 providing improvement in biological activity to inhibit infection.
  • CD4(83-94)BZL inhibited infection of CEM-SS cells by HIV cc , HIV mn and HIV RFII , as well as HTLV-IIIB. Inhibition was virtually complete at concentrations less than 125 ⁇ M (Table IV).
  • CD4(83-94)BZL also effectively inhibited HIV-induced cell fusion regardless of the isolate of HIV-1 used in the assay. Inhibition of fusion by CD4(83-94)BZL occurred whether fusion was induced using a CD4-positive lymphoid indicator cell line, or antigen-activated freshly isolated human peripheral blood leucocytes.
  • CD4(83-94)BZL is a potent and efficacious inhibitor of cell fusion induced by simian immunodefi ciency virus as well (Table IIIA).
  • the amino acid sequence of the large envelope glycoprotein of SIV is quite different from that of HIV-1, and both envelope proteins are significantly structurally different from that of HIV-2.
  • the ability of CD4(76-94)BZL to inhibit infection by HIV-2 was also tested and the peptide was found to inhibit infection of CEM-SS cells by both viruses with similar potency (Table V).
  • this core undecapeptide is responsible for anti-viral activity in a sequence dependent way, since removal of the eighth N-terminal residue, removal of the C-terminal hexapeptide, or removal of the C-terminal hexapeptide and replacement in a different order at the N-terminus of the molecule, result in peptides totally without anti-viral activity.
  • HIV Since HIV is known to have a high degree of variability in its structure, a multivalent group-specific vaccine will be required if the vaccination is chosen as the method of combating HIV infection.
  • the present invention avoids this problem because the conservation of the receptor for the virus is exploited.
  • the virions may be slightly different, they still share the property of binding to the CD4 molecule and thus share the property of inhibition by the binding epitope of the CD4 molecule.
  • polypeptide derivatives of the present invention could function as a short-acting immunosuppressant and be useful in transplantation and grafting.
  • hybrid molecule of two separate epitopes could also be combined for example with a disulfide bond or a flexible polymethylene linker to give a more potent inhibitor if more than one receptor epitope is found to be involved in ligand binding such as peptides H and E. Accordingly, peptides E and H are joined to make a peptide E/H heterodimer by disulfide bond formation between the two purified peptides.
  • peptides E and H are both active, and are joined by a disulfide bond in the native molecule (CD4), it is reasonable that the peptide E and H mixtures may become active because they contain derivatives of the respective authentic peptides which are conformationally restricted by derivatization, and therefore have a higher affinity for the HIV envelope glycoprotein than their underivatized, conformationally flexible parent peptides. In this case, the conformation of both peptides would most closely approximate their conformation in the native molecule, and be relatively restricted to this conformation by disulfide bond formation [B.J. Classon, J. Tsagaratos, I.F.C McKenzie, I.D.
  • a peptide E/H heterodimer is produced by disulfide bond formation between the two purified peptides, CD4(l-25) and CD4(76-94). Accordingly, these peptides are synthesized by solid-phase methodology as described herein and the desired peptides QGNKWLGKKGDTVELTCTASQKKS and LKIEDSDTYICEVEDQKEE combined in water and allowed to stand overnight at room temperature with slow oxygen bubbling, to effect dimerization. Dimers are purified by high pressure molecular sieving chromatography and tested for biological activity.
  • CD4 (76-94) region can be structurally refined to distinguish not only between ligands of the CD4 receptor (e.g. antigen in the presence of class II molecules vs. HIV envelope glycoprotein) but also between structural aspects of the same ligand when presented in different biological contexts (here, HIV envelope glycoprotein in intact infectious viral particles versus HIV envelope glycoprotein in cell membrane during cell-cell fusion). These data are presented below.
  • ligands of the CD4 receptor e.g. antigen in the presence of class II molecules vs. HIV envelope glycoprotein
  • structural aspects of the same ligand when presented in different biological contexts (here, HIV envelope glycoprotein in intact infectious viral particles versus HIV envelope glycoprotein in cell membrane during cell-cell fusion).
  • Such derivatization of the core active peptide includes substitution, addition of various substituents on the cysteine sulfur, methylation of glutamic acid, addition of alkylating agents, addition of hydrophobic side groups and the like in order to increase the potency and duration of action of the compound.
  • the ligand binds to a small number (> 1) of continuous oligo peptide sequences in the receptor.
  • the free energy of this reaction is comprised of both the entropy and enthalpy of binding, the former does not prohibit binding because of the restriction of conformer flexibility of the binding epitopes by the non-binding portions of the receptor molecule and within the epitope itself.
  • restriction of conformer flexibility contributes to the free energy of binding, and therefore to the affinity of binding of ligand to receptor, largely by decreasing delta S. Therefore, fragments (or even a fragment) of the receptor involved in binding is identifiable by synthesis from the receptor sequence and subsequent assay for inhibition of ligand-receptor interaction.
  • the potency to inhibit should be many orders of magnitude less than the ligandreceptor Kd since there is no restriction on conformer flexibility by the rest of the molecule. To accomplish this, synthesis is done on 430A with subsequent controlled HF cleavage to give a mixture of authentic and protected groups to take advantage of conformer flexibility restriction within the peptide sequence.
  • Derivatives of 25 mers based on S-S, hydrophilicity and the like are thus prepared and the crude mixtures are tested for their anti-receptor activity. Then active preparations are purified to homogeneity by standard methods. Then, purification of the specific inhibiting molecule to homogeneity (after test of crude mixture) is accomplished by standard purification techniques.
  • a pharmaceutical anti-viral composition in accordance with the present invention comprises an effective amount of the anti-receptor compound of the present invention to inhibit viral infection, and pharmaceutically acceptable, non-toxic sterile, carrier.
  • the present invention also provides a method of inhibiting viral infection comprising administering to a host susceptible of viral infection an effective (antiviral) amount of the active ingredient (anti-receptor molecule including derivatives of analogs thereof) to inhibit viral infection.
  • Virus inoculation of CEM-SS monolayers was carried out in the test.
  • Viral inocula HIV-1 HTLV-IIIB or HIV-2 NIH-z ) were preincubated in the presence or absence of the nominal concentrations shown of the post-resin peptide mixture from the automated solid-phase synthesis of the desired peptide LKIEDSDTYICEVEDQKEE.
  • Peptide when present, was added during viral inoculation and also during subsequent growth to confluence of the CEM-SS cell monolayer.
  • HIV-1 cc were prepared as either fresh or frozen cell culture supernatants from HIV infected cells.
  • Viral inocula were pre-treated with varying nominal concentrations of peptide in PBS or complete medium were incubated with DEAE-dextran pre-treated CEM-SS cells for one hour at 37°C Inocula were removed from the cultures by aspiration and replaced with fresh medium or medium containing the nominal concentrations of CD4(83-94)BZL shown.
  • CD4(83-94)BZL was prepared as described in detail in the legend to Figure 1A, and represents an HPLC- purified biologically active fraction (peak 7) from the automated solid-phase synthesis of the desired peptide TYIC bzl EVEDQKEE. Results are the averages of duplicate determinations (all within 30% of the mean values) in a single experiment repeated at least once with similar results.
  • CD4( 83-94)BZL prepared as described in the legend to Figure 1 was pre-incubated with 50,000 H9 cells infected with the viral isolates HlV-1 TJ , HIV-1 DV , HIV-1 HTLV-IIIB (HXB2) or SIV UC for one hour at 37°C
  • Levels of viral expression in each cell line were sufficient to allow formation of syncytia upon co-culture with 50,000 VB cells in a volume of 50 ul RPMI 1640 supplemented with heat-inactivated 10% fetal calf serum at a rate and frequency similar to that previously reported for the reference isolate HXB2 scored at four, six and twenty-four hours after co-culture: -, no visible syncytia or presyncytial aggregates observed in duplicate wells, 1-4, graded increase in syncytia to the maximum seen in the absence of treatment with peptide or anti-Leu 3A CD4 antibody.
  • Syncytial scores shown are for the end of
  • HIV induced cell fusion of VB indicator compared to acutely activated, fresh human peripheral blood mononuclear cells
  • the post-resin peptide mixture obtained from the synthesis of the desired peptide TYIC bzl EVEDQKEE was preincubated for 30 minutes at 37°C at the nominal concentrations shown.
  • Cells and peptide were combined with either VB cells or phytohemagglutinin (PHA)-stimulated PBMCs and cultured at 37°C for 24 hours, at which time syncytia were scored.
  • PHA phytohemagglutinin
  • the peptide mixture was synthesized on an Applied Biosystems, Inc. 430A Automated Peptide Synthesizer.
  • the synthesizer was programmed to couple to a PAM-glutamic acid resin (0.5 mmol glutamic acid equivalents) the amino acids E,K,Q,D,E,V,E,C,I,Y,T,D,S,D,E,I,K, and L as the tBoc, R-blocked derivatives shown in the dynamic run file attached. Double-coupling cycles were run for S,D,E,I, K and L (the last six. amino acids of the synthesis). Activation, coupling, washing, deprotection, washing cycles were as described in the.430A User Manual.
  • the resultant resin-coupled peptide mixture from the complete run (approximately 1.5 gm) was air-dried, and placed in the HF cleavage apparatus. 1 ml anisole and 1 ml dimethylsufide, and approximately 100 ⁇ g of p-thiocresol were added, and the mixture placed under vacuum. 18 ml of HF were added under vacuum, and the mixture stirred for one hour at 0° C Volatile materials were removed under vacuum over a one-hour period. The resin-peptide mixture was suspended in approximately 30 ml of ethyl ether, and allowed to stir at room temperature for 30 min. The slurry was vacuum-filtered, and suspended in approximately 250 ml of 100mM ammonium bicarbonate pH 6.5.
  • This suspension was vacuum-filtered to remove resin, and lyophilized overnight.
  • This material constitutes post-resin peptide H, or peptide H mixture, comprising 1) the desired peptide sequence LKIEDSDTYICEVEDQKEE, 2) derivatives of this sequence including R-protecting groups not removed during HF cleavage, R-protecting groups or scavengers obtained upon re-adduction during cleavage, 3) deletion peptides generated by premature chain termination during synthesis, 4) re-arrangements of R-groups (e.g.
  • Synthesis was as described above, except the sequence TYIC(benzyl)EVEDQKEE was the desired peptide, and the corresponding input protected amino acids were the same except for substitution of N-tBoc-S-methylbenzylcysteine by N-tBoc-S-benzylcysteine, and omission of p-thiocresol during the cleavage reaction.
  • the present invention is related generally to synthesis of peptide based antireceptors.
  • Antireceptors are fragments of receptor proteins, or derivative of such fragments, which include the ligand-binding region of the receptor protein, and which therefore act to block the interaction of ligands and their receptors by binding to the ligand and preventing its attachment to the native receptor molecule.
  • the present invention is related to fabrication by automated solid-phase peptide synthesis, and acid cleavage of the peptide from the solid-phase resin under controlled conditions, to produce a peptide mixture comprising authentic desired peptide, and deleted and/or derivatized (partially daprotected) congeners of these peptides which may, due to steric constraints or increased non-specific binding, have a higher affinity for the receptor ligand than the unmodified peptide sequence itself.
  • the process of fabricating antireceptors comprises synthesis of a series of peptides spanning the entire theoretical binding area of a given protein receptor molecule, and testing post-resin peptide mixtures to identify and select, by further purification, peptide derivatives which can function as antireceptors.
  • the formation of the ligand-receptor dyad is believed to be the first step in the initiation of biological response, such as viral infection, signal transduction, cell proliferation, cell fusion and the like.
  • the present invention takes advantage of the proposition that synthetically designed molecules or agents which possess high affinity for binding to ligands, specifically at their receptor-binding epitopes, would block the interaction of the ligand to the receptor, thereby inhibiting the initiation of biological responses caused by the ligand.
  • the present invention is not dependent on the nature of the antigen at all. Rather, in accordance with the present invention, it is the receptor molecule which is analyzed and based on such analysis anti-receptor molecules are synthesized which clock the receptor-ligand interaction.
  • It is a further object of ths present invention mat in cases where there are multiple ligands for a single receptor, which ligands may interact with different specific regions of the receptor, that such antireceptors would inhibit selectively the interaction of one, or one class, of ligands for the receptor, without affecting the interaction between the receptor and other (or other classes) of ligands.
  • the drug design includes sparing class II cytotoxicity or deleting class II ß-activation.
  • Fig. 1 shows the appearance of CEM-SS ceils following inoculation with HTLV-IIIB, in the presence or absence of continuous treatment with peptide CD4(83-94)BZL.
  • the peptide preparation CD4(83-94)BZL was incubated with the virus inoculum for 60 minutes after wnich the peptide-virus reaction mixture was incubated with the adherent CEM-SS cells for an additional hour. Virus-pentide- containing medium was removed and replaced with fresh complete medium containing CD4(83-94)BZL at the same concentration. The number of syncytia listed above are counts taken from the entire microtiter well.
  • Fig, 2 represents chromatographic fractionation of synthetic CD4(76-94), including bioactivity, and UV-absorbing species characterized by FAB-Mass spectrometry.
  • a typical chromatogram of 1.8 mg of CD4(76-94) on a Vydao or (10 ⁇ 250 mm) bonded-phase semi-preparative column is shown. Material was post-resin CD4(76-94) dissolved in 10 mM ammonium acetate at pH 7.0. Mobile phase was (A) ammonium acetate buffer and (B) 20% ammonium acetate buffer/80% acetonitrile. The percentage of B in the mobile phase was varied as shown (dashed line).
  • Bioactivity (hatched bar) is expressed as doses of anti-syncytial activity per fraction.
  • One dose is the smallest amount of material necessary to completely inhibit fusion between 50, 000 HTLVIIIB/H9 cells and 50,000 VB indicator cells over a twenty-four hour period under standard assay conditions.
  • Fig. 3 represents chromatographic fractionation of S-benzylCD4(83-94).
  • Post-resin material from the synthesis of S-benzyl-CD4 (83-94) was employed.
  • the desired peptide was TYIC bzl EVEDOKEE where C bzl indicates benzylation of cysteine 86 by insertion of 5-Boc-S-benzyl cysteine in place of 5-Boc-S-p-methylbenzyl cysteine in the solid-phase automated synthesis sequence yielding a peptide derivatized at cysteine with a benzyl moiety following HF cleavage of the peptide from the solid-phase resin. 10 mg of the post-resin peptide mixture was applied to the semi- preparative column under the conditions described in Fig. 2.
  • Fig. 4 shows the effects of CD4(1-25) on infection or CEM-SS cells in vitro by various HIV isolates. Numbers in parenthesis are the number of syncytia per well in untreated wells. DETAILED DESCRIPTION OF THE INVENTION
  • isolated, substantially pure anti-viral agents comprising anti-receptor polypeptides or derivatives thereof which inhibit viral infection and supsequent cell fusion and syncytia formation.
  • ligand and receptor as used herein indicate two members of a binding dyad wherein the "ligand” is the component whose binding to the receptor is inhibitatale by addition of the antireceptor peptide because the antireceptor peptide binds to the ligand, replacing receptor in the ligand-receptor dyad, and the "receptor” is that region of a molecule (before and after derivatization) which defines an epitope responsible for oinding of the ligand and based on which the antireceptors are tailored,
  • a single macro molecule may have several epitopio sites, hence have several receptor subtype binding domains within the same molecular configuration for binding of several different ligands.
  • anti-viral agent means an agent which is at least in part a polypeptide or a derivative thereof (including conjugate, analog and the like) which inhibits either viral infection or viral induced cell fusion .
  • substantially pure as used herein means the product is as pure and homogeneous as can be obtained by employing standard techniques well known to one of ordinary skill in the art.
  • CD4 (Leu3A/T4) molecule is present on the surface of a subset of human T-lymphocytes which help cytotoxic- and B-lymphocytes during class II-restricted immune response to foreign antigen.
  • the CD4 molecule is also the receptor by which the human immunodeficiency virus (HIV) binds to T-lymphocytes and infects these cells. Since the cloning and sequence of CD4 have been accomplished, this receptor was selected to illustrate the principles and the application of tne present invention. Accordingly, several polypeptide.
  • fragments containing 7-25 amino acid sequences of the CD4 receptor extracellular domain were synthesized and tested for their ability to inhibit three CD4-mediated functions: (1) Fusion of HIV-infected and non-infected CD4-positive T-Iymphoma cells: (2) Infection of CD4-positive lymphoma cells with HIV; and (2) Proliferation of T-helper- inducer cells in the presence of allogeneic irradiated stimulator cells (the mixed lymphocyte reaction).
  • the ability of the peptide fragments to inhibit binding of a CD4 antibody which neutralises all three of these processes, to the CD4 molecule on the surface of peripheral blood leucocytes, has also been determined in order to map the binding epitope of this antibody.
  • CD4(76-94) refers to the desired 19 residue peptide LKIEDSDTYICEVEDQKEE.
  • CD4(83-94) refers to the desired 12 residue peptide TYICEVEDQKEE.
  • S-benzylCD4(76-94) and S-benzylCD4(83-94) refer to the desired 19 residue peptide LKIEDSDTYIC bzl EVEDQKEE, and its 12-residue congener, in which cysteine protection via benzyl, rather than methylbenzyl, derivatization during solid-phase synthesis yields a final peptide product in which the cysteine residue remains protected (S-benzyiated) after HF cleavage.
  • unfractionated mixtures of the peptide material resulting from the solid-phase synthesis of the desired peptides are referred to as the "post-resin peptide mixture"; for example CD4(76-94) post-resin peptide mixture, or CD4(76-94) peptide mixture.
  • the compounds of the present invention are characterized by having a sequence comparable to a sequence of the CD4 molecule, in particular a sequence distal to the N-terminus.
  • the sequence includes the cysteine at position 85 of CD4 at which the sulfur on the cysteine is blocked.
  • the compound is prepared by reacting underivatized peptide under mild conditions with reagents known to react with mercaptans.
  • reagents known to react with mercaptans.
  • These reagents may be active halides, pseudohalides, active olefins, e.g., x,p-enoneo, such as maleimide, disulfides. or the like.
  • the derivatizing groups should provide a physiologically acceptable product.
  • the blocking groups will have from about 1 to about 36 carbon atoms and may be aliphatic, alicyclic, aromatic, heterocyclic or combinations thereof. Usually, the blocking group will have from 0 to 10 hetero-atoms, which may be in the longest chain, as a substituent on a chain or ring atom or the like. For the most part the heteroatoms will be selected from halogen, nitrogen, oxygen or sulfur. Binding of the substituent to the sulfur of the cysteine residue may be via a carbon, or heteroatoms such as nitrogen, or sulfur atom.
  • the bulk of the group immediately distal to the cysteine sulfur and attached directly to the sulfur is preferably less than that of a naphthyl group and greater than that of a linear lower alkanoic acid, most preferably approximately the size of a phenyl group or similar cyclic or heterocyclic group (either aromatic or non-aromatic).
  • the group optionally may be furtner substituted.
  • aryl group may be used to block the sulfur, for example, an aryl-containing substituent or a thioether resulting from the reaction between the thio group of the cysteine and a maleimide.
  • the aryl group is preferably selected from 5- and 6-membered aromatic rings containing carbon and 0-1 oxygen or sulfur and 0-3 nitrogen atoms in the ring.
  • Phenyl is a preferred aryl group, e.g., benzyl and naphthyl.
  • the aryl-containing group may be substituted or unsubstituted.
  • Substituents may include alkyl, particularly methyl, halogen, particularly chloro, nitro, etc., where the substituents may be in any position, preferably at the ortho position.
  • the aryl group may have from 0 to 3 substituents, usually not more than 2 substituents, which substituents may be the same or different.
  • the olefin will usually be conjugated with a second site of unsaturation, e.g., a carbonyl group.
  • a second site of unsaturation e.g., a carbonyl group.
  • Acyclic groups, maleimido groups, conjugated polyolefins, or the like may find use.
  • precursor disulfides will be employed which have a convenient leaving group, which is displaced by the cysteine to form a new disulfide bond.
  • intramolecular disulfides formed from another cysteine of a contiguous CD4 peptide chain are excluded.
  • the blocking group which allows for linking to another molecule, e.g., carboxy, carboxy ester, or the like.
  • the carboxy may then be activated with a carbodiimide, carboxy diimidazole, or the like for reaction with an amine or alcohol, for example, a protein.
  • reaction compounds for preparing derivatives of the CD4 molecule and fragments thereof include the following. wherein the group bound to the sulfur of cysteine 86 may be one of the following groups.
  • n - 1-10 and a hyd rogen on any of the ring carbons is replaced by X as described in (a) above.
  • n " 1 -5 and X is as described in (a) above.
  • n - 1 -3 and X is as described in (a) above.
  • heterocyclic or substituted heterocyclic compounds such as (i) substituted pyridyl, (ii) imidazola or (iii) quinoline:
  • n - 0-3 and R is a pair of electrons; H; alkyl of1-2 carbon atoms; or 0.
  • maleimide adducts such as m-maleimidobenzoylN-hydroxysuccinimide ester; m-maleiraido-benzoylaulfosuccinimide ester; N-succinimldyl4-(p-maleimidophenyl)-butyrate; N-succinimidyl4-(N-maleimidomethyl)cyclohexane-1-carboxylate; or sulfosuccinimidyl- 4-(N-maleinidomethyl) cyclohexane-1-carboxylate; bis- maleimidohexane; bismaleimidomethyl ether; or N- ⁇ -maleimidobutyryloxysuccinimide.
  • thio-containing compounds such as:
  • X is N 3 ; OH; OR; NH 2 ; NHR; NO 2 ; SH; SR; halogen; CO 2 H; or aryl of from 5 to 12 carbon atoms; and
  • R-S- where R is alkyl or substituted alkyl.
  • cytotoxic agents such as alkylating agents, for example pipobroman; thio-TEPA; chlorambucil; cyclophosphamide; nitrogen mustard; mephalan; or uracil mustard.
  • membrane-perturbating agents for example adriamycin; ionophores, such as valinomycin; or surface active agents, such as detergents.
  • anti-retroviral agents such as 5-azidothymidine (AZT); dideoxycytidine (DOC); dideoxyadenosine (DDA); or dideoxyinosine (DDI).
  • particular derivatives may be cytotoxic. in which case these derivatives may be modified to reduce cytotoxicity or substantially eliminate toxicity at pharmacologically active dosage levels.
  • a preferred peptide in accordance with the present invention comprises substantially the same sequence as CD4 ammo acids of the sequence 85 to 92, usually 83 to 94, and more particularly 81 to 94, conveniently 76 to 34 where the sequence may ba further extended by as many as 10 amino acids or more at either terminus, where the extension amino acids may be the same or different from the CD4 sequence.
  • the sequence will usually have at least greater than 2 amino acids of the natural sequence on each side of the cysteine. The numbering of the amino acids is as set forth in Maddon et al., Cell (1985) 41:93-104,
  • the peptide sequences may be modified by terminal amino acylation, for example, acetylation; carboxy amidation, for example, with ammonia, methylamine and the like.
  • amino acid sequence need not correspond exactly to the sequences given above, but may be modified by from 1 to 3 conservative or non-conservative mutations, including deletions and insertions involving not more than about 1 amino acid, without significantly afrecting the activity of the product. Therefore, the polypeptides may be subject to various changes, such as insertions, deletions, and substitutions, either conservative or non-conservative, where such changes provide for advantages in their use.
  • conservative substitutions is intended combinations such as gly, ala; val, ile, leu; asp, glu; asn, gln; ser, thr; lys, arg: and phe, tyr, trp.
  • the sequence will not differ by more than 20% from the sequence of the epitope of the CD4 molecule except where additional amino acids may ae added at either terminus for the purpose of providing an "arm" by which the peptides of this invention may be conveniently linked for immobilization.
  • the arms will usually be at least about 5 amino acids and may be 50 or more amino acids.
  • the peptides of the present invention may also be conjugated with or linked to a soluble macromolecular entity.
  • the macromolecular entity may be a polypeptide, either naturally occurring or synthetic, to which antibodies are unlikely to be encountered at high levels in human serum.
  • Illustrative polypeptides include poly-L-lysine, bovine serum albumin, keyhole limpet hemocyanin, bovine gamma globulin and the like. The choice is primarily one of convenience and availability.
  • the conjugates will generally comprise at least one molecule of the peptide of the present invention per macromolecule and usually not more than about 1 per 0.5 kDal and preferably not more than about 1 per 2 kDal of the macromolecule. Of course, one or more different peptides may be linked to the same macromolecule.
  • Conjugation or linking may be accomplished by any conventional method employing such reagents as p-maleimicobenzoic acid, p-methyldithiobenzoic acid, maleic acid anhydride, succinic acid anhydride, glutaraldehyde and the like.
  • the linkage may occur at the N-terminus, c-terminus, or at a site intermediate to the ends of the molecule. Futhermore, peptide may be derivatized for linking or linked while bound to a support, or the like.
  • the peptides can be prepared in a wide variety of ways.
  • the peptides because of their relatively short size, may be synthesized in solution or on a solid support in accordance with standard techniques.
  • Various automatic synthesizers are commercially available and can be used in accordance with known protocols. See for example, Stewart and Young, Solid Phase Peptide Synthesis, 2nd Ed., Pierce Chemical Company, 1984; and
  • hybrid DNA technology may be employed where a synthetic gene may be prepared by employing single strands which code for the polypeptide or substantially complementary strands thereof, where the single strands overlap and can be put together in an annealing medium so as to hybridize. The nybridized strands may then be ligated to form the complete gene and by choice of appropriate termini, the gene may be inserted into any suitable and readily available expression vector. See for example, Maniatis et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, 1982. Alternatively, the region of the genome coding for the peptide may be cloned by conventional recombinant DNA techniques and expressed (see Maniatis, et al, supra).
  • DNA coding sequences based upon the known sequence for CD4 may also be used to obtain the peptide. Fragments from these sequences may be employed for expression of peptide fragments, conservative base changes may also be made, where the modified sequence(s) code for the same amino acid(s), or non-conservative changes in the coding sequence may be made, where the resulting amino acid may be a conservative or non-conservative entity.
  • the coding sequence may be extended at either the 5'- or 3' - terminus or both termini to extend the peptide, wnile retaining its epitopic site.
  • the extension may provide for an arm for linking, for providing antigenic activity, or the like.
  • the coding sequence is provided with start and stop codons, promoter and terminator regions and usually a replication system to provide an expression vector for expression in a cellular host, for example prokaryotio or eukaryotic, bacteria, yeast, mammal and the like.
  • the thio group may be blocked with any convenient reagent which replaces the hydrogen of the mercaptan of the cysteine.
  • any convenient reagent which replaces the hydrogen of the mercaptan of the cysteine.
  • active halogens active pseudohalogens or active oiefins may be used.
  • the reaction temperature may range from about 0 to about
  • reaction time ranging from about
  • Polar solvents particularly aqueous solvents, may be employed and organic solvents may be present up to about
  • Organic solvents include acetonitrile, acetone, diethyl ether, dimethylformamide and the like.
  • a mild basic acid accepter is usually required such as carbonate, bicarbonate and the like. Generally an excess of the blocking agent is employed.
  • various disulfides may be employed, such as methyldithio, p-nitrophenyldithio,
  • 2-pyridyIdithio and the like and the second sulfur may be joined to a methylcarboxy ester, aryl or other convenient group.
  • the conditions for displacement are well known to one of ordinary skill in the art and need not be illustrated here.
  • the peptides of the present invention and compositions may be used in vitro and in vivo.
  • the compounds or compositions may be employed for detecting the role of CD4 in viral infection, preventing infection of CD4-bearing cells including T cells and macrophages susceptible to HIV, inhibiting
  • the compounds or compositions of the present invention may be used prophyiactically or therapeutically for preventing infection or inhibiting proliferation of the virus and infection of or cytopathic effects on additional T cells or other CD4-bearing cells by inhibiting HIV-CD4 interactions related to clinical manifestation of viral disease.
  • the composition can be made with any suitable pharmaceutically acceptable carrier and can be administered in any suitable anti-viral amount by any suitable route such as intramuscularly, intraperitoneally, intravenously, parenterally, intranasally, topically, orally and the like.
  • any physiologically acceptable medium may be employed, such as deionized water, saline, phosphate buffered saline, aqueous ethanol, and the like.
  • the effective anti-viral amount of the active ingredient(s) will depend upon the solubility, particular use, route and frequency of administration, and the like. The amount used will also depend upon the relatives antisyncytial activity of the composition employed. Generally, the dosage will be in the range of about 0.2 mg to about 500 mg, preferably in the range of about 10 mg to 100 mg.
  • Activation occurs in trifluoroacetic acid/dichloromethane (TFA.DCM), followed by neutralization in N,N-diisopropylethylamine/N,N-dimethyIformamide (DIEA/DMF), and washing in DMF.
  • DIEA/DMF N,N-diisopropylethylamine/N,N-dimethyIformamide
  • Addition of the next amine acid residue occurs by mixing in the reaction vessel (RV) the deprotected rasin-linked growing chain, and activated incoming amino acid (N- and R-blocked) in DMF.
  • the activated incoming amine acid is prepared by (1) dissolution or the amino acid with alpha amino protected with t-butyloxycarbodiimide (DCM); (2) addition of 0.5 equivalents of dicyclohexylcarbo-diimide (DCC) to form the symmetric anhydride; and (3) transfer to the concentrator and DCM/DMF exchange.
  • DCM t-butyloxycarbodiimide
  • DCC dicyclohexylcarbo-diimide
  • Dicyclohexylurea formed in the reaction is left in the activation vessel and is dissolved in methanol and discarded prior to the activation of the next amino acid in that vessel.
  • Some fragments are prepared as esters of 1-hydroxybenzotriazole (HOBT) in the activation vessel prior to the concentration and coupling.
  • HOBT 1-hydroxybenzotriazole
  • Each step ends with N-deprotection, neutralization oind washing of the resin.
  • Functional groups on the amino acid side chain are blocked during synthesis by side-chain derivatization of each amino acid and esters or amides of: Tos (R,H) , o-benzyl (D.E), benzyl (S,T, in some cases C) Br-Z (Y), Cl-Z (K), or 4-Mebenzyl (C).
  • the peptide is cleaved from the resin by treatment with HF at 0oC for two hours with stirring, with the addition as specified of anisole, thioanisole. p-cresol, dimethylsulfide (DMS). HF and other volatile components were removed under vacuum, resin and peptide rinsed with ethyl ether, peptide dissolved in ammonium acetate, and resin removed by filtration. After lyophilisation, the peptide mixture, including side-chain protected and unprotected full-length peptide deletion sequences, anisolated peptide. and rearranged and oxidited peptide was designated "post resin peptide X".
  • post-G-10 peptide X After dissolution in 10% acetic acid or ammonium acetate and passage over G-10 Sephadex and G-25 Sephadex, respectively, to remove low-molecular weight side products including trace amount of scavengers, the mixture was designated "post-G-10 peptide X". After dissolution in 0.1% TFA or ammonium acetate and chromatography on reverse phase HPLC, the individual components were designated “post-HPLC peptide X peak (or fraction) Y" , or simply "post-HPLC peptide X" if a peak comprised a single pure authentic peptide by amino acid analysis, Edman degrading sequencing and/or fast atom bombardment mass fragmentography (see Appendix A for specific conditions).
  • Peptides were then submitted to one or all of the following four tests. Some of the peptides were also derivatized, after purification, by incubation with alpha-bromo-toluene or alpha-bromo-xylene to obtain the benzyiated adducts of cystein residues within the peptide (Erickson et al, J. Amer. Chem. Soc. 95:11, 1973).
  • a typical protocol for derivatization is as follows: About 5 mg (2.2 ⁇ mol) of peptide of interest (such as H, post HPLC shown to be authentic human CD4 76-94 by FAB mass fragmentography and Edman sequencing) was placed in the flask, and about 1.5 ml triethylamine and about 1.22 mg 4-meth ⁇ lbenzyl bromide (6.6 mmol) was added.
  • peptide of interest such as H, post HPLC shown to be authentic human CD4 76-94 by FAB mass fragmentography and Edman sequencing
  • Reaction mixture was stirred for sufficient time (6-16 hrs.) at 25oC, vacuum evaporated for about 1.5 hrs., re-suspended in 0.01 mM ammonium acetate, pH 7.0, extracted with one volume of onloroform if necessary, and the resultant aqueous phase lyophilized.
  • the lyophilized material was reconstituted in PBS and tested for anti-fusion activity in the assay of Lifson et al , (Nature 323:725-728, 1986).
  • Syncytial Center Assay 50 ⁇ l of each peptide in PBS was mixed with 50 ⁇ l of 50-280 syncytial-forming units (SFUs) of HTLV-IIIB, RF or CC virus in PRMI 1640. Tubes were incubated at room temperature (about 22°-25°C) for 60 minutes, and 40 ⁇ l aliquots of each used to inoculate CEM cells. After an hour at 37°C, inoculum was removed, minitray well fed 100 ⁇ l of fresh RPMI mediums, and syncytial centers scored at day 2 post- infection. In some experiments, supernatants were harvested at day two for measurement of the viral antigen p24 as an additional confirmation of blockade of infection.
  • SFUs syncytial-forming units
  • FACS VB CD4+ cells in 10 ⁇ l of medium are added to 100 ⁇ l of the anti-CD4 antibody S3.5 labeled with FITC, and previously incubated at 37oC for one hour with 500 ⁇ M peptide.
  • S3.5 is a murine IgGI monoclonal antibody which binds to the CD4 molecule within the Leu3A/OKT4A epitope cluster and block HIV infection as well as other CD4-dependent T-cell functions.
  • Sufficient S3.5 is added to cells to saturate their CD4 antigen. Cells are incubated an additional 45 minutes at 37°C and analyzed by flow cytometry.
  • MLR Mixed lymphocyte Reaction
  • Tables I, II and III The results are summarized in Tables I, II and III.
  • Table I the structure of the peptide synthesized, its degree of purity upon testing, and its activity in each of the four assay systems examined are given.
  • Table II the activities of various deletions from the 10 mer which were active in the initial screen to inhibit fusion of HTLVIIIB infected and noninfected CD4-pos ⁇ tive T-lymphoma cells are given.
  • Table III shows the effect of anti-receptor polypeptide (H) of the present invention on syncytium formation by three different infectious viral stocks of HIV.
  • dose given is that required to decrease S3.5 binding to CD4- positive cells more than 50%, measured by flow cytometry. n.a. not active at 100 ⁇ M, the highest dose tested.
  • Anti-syncytial activity of deletants and altered-sequence variants of CD4cys-faenzyI(75-94) define a core anti-synctyial peptide.
  • the anti-syncytial activity of three preparations of CD4(83-94)BZL were compared.
  • the three preparations were A. TYIC bzl EVEDQKEE, the peptide mixture obtained as described in Figure3 . by solid phase synthesis of the desired peptide TYIC(S-benzyl)EVEDQKEE, B.
  • the purified peptide S-benzyl-CD4(83-94) obtained by HPLC fractionation of the peptide mixture described in A., C.
  • Potency is expressed as the lowest concentration of the peptide mixture (nominal concentration based on mass of the input peptide and formula weight of the parent peptide LKIEDSDTYICEVEDQKEE) capable of complete inhibition of HIV HXB-2 -induced cell fusion. Not active, no anti-syncytial activity at ⁇ 500 ⁇ M.
  • each fresh (CC) or frozen (IIIB, RF-2) viral stock was brought to room temperature, diluted 1:1 with peptide in PBS, and allowed to stand for 60 min at room temp. This mixture then added to CEM cells in micro-titre wells. Incubation at 37oC for 50 min was followed by a rinse. Cells then allowed to grow to confluent monclayer over next 48 hours. Number of syncytial centers per well counted.
  • Peptide H Cleavage conditions were 1 ml thioanisole, about 20 ml HF. Tested as a post G-10 (one major peak on analytical HPLC, no other peaks visible). This material is active in the fussion assay. It has the correct sequence by Edman degradation sequencing (note no cys in this sequencing method).
  • Peptide H(r) Resynthesis of peptide H. Cleavage conditions were 1 ml thioanisole, about 20 ml HF, same as for H. Post resin mass spec shows molecular ion within a complex spectrum, and -HOH (dehydro) ion as well. Post G-10 (100 mg on, 14 mg recovered from 10% acetic acid chromatrography). Mass spec post G-10 shows dehydro peak, no sign of parent peak. The post G-10 H(r) showed complete inhibition of fusion at 100 uM at 2 and 4 hours but some breakthrough overnight, and complete inhibition of fusion at 500 ⁇ M at 2, 4 and 24 hours.
  • Peptids Bzl H On-line bensylation, with tBcc-Cys-br. Taken from resin with HF in two batches. First batch gave about 40 mg, active in fusion assay at 60 uM. Second batch gave about 270 mg, active in fusion assay at 120 uM. TYICEVEDQKEE (CD83-94)
  • Peptide Bzl H8-19 Synthesis with bzl Cys instead of methylbzl Cys. Potent as crude resin at 120 ⁇ M in fusion assay. Synthesis of Peptide H Analogs
  • a series of peptide H analogs including those with substitutions other than a benzyl group on cysteine residue number 86 were also synthesized. The following methods were employed.
  • Method 1 One and one-half mg of purified peptide H was dissolved in 120 ⁇ l acetonitrile plus 150 ⁇ l deionized water and 60 ul sodium bicarbonate (0.5 N). Acetonitrile, 200 ⁇ l, was added followed by a 40 molar excess of benzyl bromide or other reaction compound (see Table 2). The mixture was incubated at room temperature for 1 hr, then 2 ⁇ l of triethylamine was added to the reaction mixture which was further reacted at room temperature (about 22o-25oC) for 1 hr. Forty microliters of ammonium bicarbonate (1 M) was added, then 1 hr later the reaction mixture was reduced to dryness in a centrifugel vacuum concentrator. The desired powder was reconstituted in PBS and used directly in the cell fusion assay (vide supra)
  • Method 2 This method is identical to Method 1 except that the addition of triethylamine was avoided in the reaction.
  • the dry powder was dissolved in PBS plus 10% tetrahydrofuran and an equal volume of chloroform. The mixture was vortexed, then the water layer and interface were collected and used for bioassay.
  • Method 3 one mg of pure peptide H was dissolved in 400 ul of 60% acetonitrile and 40-80 ul sodium bicarbonate (0.05 M). An eight molar excess of benzyl bromide or other reaction compound (see Table 4) was then added to the peptide H solution and reacted at room temperature for 6 hrs. After completion of the reaction, the product was dried by centrifugal vacuum concentration and dissolved in 5 mM sodium bicarbonate. Then one volume of PBS was added. The solution was further mixed with an equal volume of chloroform and allowed to partition by mixing of the soulution. The chloroform layer was removed and the aqueous phase used for bioassay. The results are shown in Table IIIA.
  • peptide H The most effective derivatives of peptide H were those prepared using benzyl bromide, 2-chicrobenzyl bromide, 4-(N-maleimidomethyl) cyclohexane-1-carboxylic acid N- hydroxysuccinimide ester or 3-(2-pyridyidithio) propionic acid N-hydroxysuccinimide ester.
  • the two derivatives prepared using naphthyl reaction compounds were ineffective at the concentrations tested.
  • Benzyl cysteine including "N-term"-T- BOC-blocked and CBZ-blocked "N-term” blocked benzyl cysteine, had no effect on HIV-induced cell fusion at all concentrations tested (up to 500 ⁇ M) . Demonstration that multiple derivatization of the parent 12-mer peptide structure produces biologically active (anti-viral) material.
  • the peptide of sequence corresponding to CD4(1-25) and including an N-terminal tyrosine residue was synthesized exactly as described for peptide H, and the post- resin peptide mixture (exactly as described for peptide H) was dissolved in phosphate-buffered saline and tested for anti- syncytial and anti-infection activity in two standard assays described herein supra.
  • the peptide mixture was without effect to inhibit HIV-induced cell fusion, but the mixture inhibited infection cf CEM-SS cells as measured in the syncytial-forming quantitative microtiter assay, using four isolates of HIV-1 as shown in Figure 4.
  • cysteine is one candidate for a residue within the sequence of CD4(76-94) that could be benzylated in the reaction performed.
  • the importance of the cysteine residue, whether derivatized or free, in generation of biological activity upon synthesis of CD4(76-94) was confirmed by the synthesis of serinyl and alanyl congeners of CD4(83-94) and the phenylalanyl congener of CD4(75-94)amide.
  • cysteine residue is added to the growing peptide chain as t-Boc-S-benzyl-cysteine rather than t-Boc-S-methylbenzyl-cysteine, and remains largely S-protected after HF cleavage, compared to complete or nearly complete removal of the S-methylbenzyl block group used in the previous syntheses of CD4(76-94).
  • the peptide mixture obtained after automated synthesis of the desired peptide S-benzylCD4(83-94) was approximately three-fold more potent to inhibit HlV-induced cell fusion than the peptide mixture obtained after synthesis of CD4(83-24) using t-Boc-S- methylbenzyl-cysteine.
  • a series of deletion peptides were synthesized using t-Boc-S-benzyl-protected cysteine, and tested as inhibitors of HIV-induced cell fusion. The results indicate that the core sequence for this biological activity is CD4(83-89 ) (Table 5).
  • the biological activity requires the correct sequence of the core peptide, as well as derivatization, since a nineteen-residue peptide with the same composition but slightly altered sequence compared to CD4(76-94) had no activity as an anti-syncytial agent.
  • the activity was attributable to peptide material, since proteolytic digestion completely abolished the anti-syncytial activity of the active peptide preparation.
  • a core peptide [S-benzylCD4(83-89)] retaining significant biological activity was defined.
  • CD4(76-94) at concentrations up to 500 uM had no effect on HTLV-I-induced cell fusion in vitro, Likewise, activity appears to be restricted to inhibition of OD4 function related to viral interaction, since complete inhibition of HIV-induced cell fusion could be observed at a dose of the CD4(75-94) peptide which did not affect the MLR response (vide supra).
  • CD4-derived peptides may involve competitive blockade of viral attachment to CD4 via peptide binding to the CD4-combining region of the HIV gp120 glycoprotein.
  • the partially purified S-benzyl-CD4 (83-94) peptide blocked fusion between HlV-infected T cells and CD4-expressing T- cell lines or CD4-expressing peripheral blood-derived cells, independent of the isolate of HIV used in the assay and also blocked the CD4-dependent fusion induced by the structurally variant simian immunodeficiency virus.
  • Each of these preparations was active in inhibiting giant cell formation between infected and non-infected CD4+ cells in vitro .
  • An active peptide could also be produced by modifying the synthesis of the authentic peptide such that a benzyl instead of a methylbenzyl protecting group was incorporated into the growing chain of cystein. affording a peptide with cystein derivative more stable to HF cleavage than the original compound. This material was also efficacious in inhibiting fusion.
  • chloroform extraction of an aqueous solution of the original synthesis of peptide H afforded at the interface of the organic/aqueous layers material which was potent and completely efficacious at 30 ⁇ M to inhibit CD4+-dependent fusion between HTLV-IIIS infected and non- infected human lymphoma cells. This represented about 3-fold increase in the specific activity of the derivatized peptide H material.
  • CD4 ⁇ 83-94 BZL was a potent inhibitor of HIV-induced cell fusion.
  • This material was prepared and partially purified by collection of a single UV-absorbing peak after fractionation using reverse-phase (C8) chromatography.
  • CD4 ( 83-94 ) BZL was tested for its ability to inhibit infection of CEM-SS cells by HTLV-IIIB (Fig. 1) .
  • CD4 ( 83-94 ) BZL was present only during the sixty minute period of viral inoculation, the IC 50 .
  • the dose required to achieve a 50% reduction in the number of syncytia formed in peptide-treated versus virus-infected, non-treated controls) for this peptide preparation was approximately 63 uM (Fig. 1A).
  • Inhibition of infection rather than inhibition of cell fusion following infection appears to be the mechanism of action of CD4(33-94)BZL as well as the CD4(78-94) peptide mixture, since decreased numbers of syncytia were observed five-six days after viral inoculation, despite the fact that peptide was present only during the initial one hour viral absorption step of the assay.
  • the findings presented herein now provide a "process principle" for obtaining an antiviral agent.
  • the principle is that the viral receptor is fractionated into various smaller entities. These entities are then separated and purified.
  • the purified entities, if inactive as antiviral agent, are then derivatized as described in detail herein and thus biologically active antiviral peptide derivatives are obtained.
  • a 19mer pure peptide was reduced to a 12mer pure peptide which was then converted to a S-benzyl 12mer.
  • An inactive peak 4 was then converted by solution derivatization to an active peptide peak 7 which was active as an antiviral agent at the nominal concentration of 32 uM.
  • a synthetic, isolated, substantially pure, biologically active product is obtained by the process of the present invention.
  • peptide G (25mer comprising CD4 51-75) blocks antibodies directed against CD4 molecule.
  • a 19mer molecule (such as 71-89. 72-90, 73-91, 74-92, 75-93, 75-94) could partially inhibit HIV infection; 12mer (83-94) shows antiviral property and 7mer (83-89) is the core peptide; an extension of N-terminus of CD4 providing improvement in biological activity to inhibit infection.
  • CD4(83-94)BZL inhibited infection of CEM-SS cells by HIV cc , HIV mn and HIV RFII , as well at HTLV-IIIB. Inhibitation was virtually complete at concentrations less than 125 ⁇ M (Table IV).
  • CD4983-94)BZL also effectively inhibited HIV-induced cell fusion regardless of the isolate of HIV-3 used in the assay. Inhibition of fusion by CD4(83-94)BZL occurred whether fusion was induced using a CD4-positive lymphoid indicator cell line, or antigen-activated freshly isolated human peripheral blood leucocytes.
  • CD4(83-94)BZL is a potent and efficacious inhibitor or cell fusion induced by simian immunodeficiency virus as well (Table IIIA).
  • the amino acid sequence of the large envelope glycoprotein of SIV is quite different from that of HIV-1 , and both envelope proteins are significantly structuralIy different from that of KIV-2.
  • the ability of CD4(76-94)BZL to inhibit infection by KIV-2 was also tested and the peptide was found to inhibit infection of CEM-SS cells by bath viruses with similar potenrcy (Table V) .
  • this core undecapeptide is responsible for anti-viral activity in a sequence dependent way, since removal of the eighth N-terminal residue, removal of the C-terminal hexapeptide, or removal of the C-terminal hexapeptide and replacement in a different order at the N- terminus of the molecule, result in peptides totally without anti-viral activity.
  • HIV Since HIV is known to have a high degree of variability in its structure, a multivalent group-specific vaccine will be required if the vaccination is chosen as the method of combating HIV infection.
  • the present invention avoids this problem because the conservation of the receptor for the virus is exploited.
  • the virions may be slightly different, they still share the property of binding to the CD4 molecule and thus share the property of inhibition by the binding epitope of the CD4 molecule.
  • polypeptide derivatives of the present invention could function as a short-acting immunosuppressant and be useful in transplantation and grafting.
  • hybrid molecule of two separate epitopes could also be combined for example with a disulfide bond or a flexible polymethylene linker to give a more potent inhibitor if more than one receptor epitope is found to be involved in ligand binding such as peptides H and E. Accordingly, peptides, E and H are joined to make a peptide E/H heterodimer by disulfide bond formation between the two purified peptides.
  • peptides E and H are both active, and are joined by a disulfide bond in the native molecule (CD4) , it is reasonable that the peptide E and H mixtures may become active because they contain derivatives of the respective authentic peptides which are conformationally restricted by derivatization, and therefore have a higher affinity for the HlV envelope glycoprotein than their underivatized, conformationally flexible parent peptides. In this case, the conformation of both peptides would most closely approximate their conformation in the native molecule, and be relatively restricted to this conformation by disulfide bond formation [B.J. Classon, J. Tsagaratos, I.F.C. McKensie, I.D.
  • a peptide E/H heterodimer is produced by disulfide bond formation between the two purified peptides, CD4(1-25) and CDC4(76-94). Accordingly, these peptides are synthesized by solid-phase methodology as described herein and the desired peptides QGNKVVLGKKGDTVELTCTASQKKS and LXIEDSDTYTCEVEDQKEE combined in water and allowed to stand overnight at room temperature with slow oxygen bubbling, to effect dimerization. Dimers are purified by high pressure molecular sieving chromatography and tested for biological activity.
  • antireceptors in the CD4(76-94) region can be structurally refined to distinguish not only between ligands of the CD4 receptor (e.g. antigen in the presence of class II molecules vs. HIV envelope glycoprotein) but also between structural aspects of the same ligand when presented in different biological contexts (here, HIV envelope glycoprotein in intact infectious viral particles versus HIV envelope glycoprotein in cell membrane during cell-cell fusion ).
  • ligands of the CD4 receptor e.g. antigen in the presence of class II molecules vs. HIV envelope glycoprotein
  • structural aspects of the same ligand when presented in different biological contexts (here, HIV envelope glycoprotein in intact infectious viral particles versus HIV envelope glycoprotein in cell membrane during cell-cell fusion ).
  • Such derivatization of the core active peptide includes substitution, addition of various substituerts on the cysteine sulfur, methylation of glutamic acid, addition of akylating agents, addition of hydrophobic side groups and the like in order to increase the potency and duration of action of the compound.
  • the Iigand binds to a small number (>.:) of continuous oligopeptide sequences in the receptor.
  • the free energy of this reaction is comprised of both the entropy and enthalpy of binding, the former does not prohibit binding because of the restriction of conformer flexibility of the binding epitopes by the non-binding portions of the receptor molecule and within the epitope itself. It is further postulated that restriction of conformer flexibility contributes to the free energy of binding, and therefore to the affinity of binding of Iigand to receptor, largely by decreasing delta S.
  • fragments (or even a fragment) of the receptor involved in binding is identifiable by synthesis from the receptor sequence and subsequent assay for inhibition of ligand-receptor interaction.
  • the potency to inhibit . should be many orders of magnitude less than the ligand-receptor Kd since there is no restriction on conformer flexibility by the rest of the molecule.
  • synthesis is done on 430A with subsequent controlled HF cleavage to give a mixture of authentic and protected groups to take advantage of conformer flexibility restriction within the peptide sequence.
  • Derivatives of 25 mers based on S-S, hydrophilicity and the like are thus prepared and the crude mixtures are tested for their anti-receptor activity. Then active preparations are purified to homogeneity by standard methods.
  • purification of the specific inhibiting molecule to homogeneity is accomplished by standard purification techniques.
  • a pharmaceutical anti-viral composition in accordance with the present invention comprises an effective amount of the anti- receptor compound of the present invention to inhibit viral infection, and pharmaceutically acceptable, non-toxic sterile, carrier.
  • the present invention also provides a method of inhibiting viral infection comprising administering to a host susceptible of viral infection an effective (anti-viral) amount of the active ingredient (anti-receptor molecule including derivatives or analogs thereof) to inhibit viral infection.
  • Table IV Inhibition of HIV-2 infection of CEM-SS cells by CD4(76-94) post-resin peptide mixture.
  • Virus inoculation of CEM-SS monolayers was carried out in the test.
  • Viral inocula HIV-1 HTLV-IIIB or HIV-2 NIH-Z
  • w ere Preincubated in the presence or absence of tne nominal concentrations shown of the post-resin peptide mixture from the automated solid-phase synthesis of the desired peptide LKIEDSDTYICEVEDQKEE.
  • Peptide when present, was added during viral inoculation and also during subsequent growth t ⁇ confluence of the CEM-SS cell monolayer.
  • Viral stocks of HIV-1 MTLV _ IIIB , HIV-1 RF-II , HIV-1 MN and HIV-1 cc were prepared as either fresh or frozen cell culture supernatants from HIV infected cells.
  • Viral inocula were pre-treated with varying nominal concentrations of peptide in PBS or complete medium were incubated with DEAE-dextran pre-treated CEM-SS cells for one hour at 37oC. Inocula were removed from the cultures by aspiration and replaced with fresh medium or medium containing the nominal concentrations of CD4(83-94)BZL shown.
  • CD4(83-94)BzL was prepared as described in detail in the legend to Figure 1A, and represents an HPLC-purified biologically active fraction (peak 7) from the automated solid-phase synthesis of the desired peptide TYIC bzl EVEDQKEE. Results are the averages of duplicate determinations (all within 30% of the mean values) in a single experiment repeated at least once with similar results. Table VI. Potency of CD4(83-94)BZL to inhibit fusion induced by several isolates of HIV and by SIV.
  • CD4(83-94)BZL prepared as described in the legend to Figure 1 was pre-incubated with 50,000 H9 cells infected with the viral isolates HIV-1 TJ , HIV-1 DV , HIV-1 HTLV-IIIB (HxB2) or SlV UC for one hour at 37oC
  • Levels of viral expression in each cell line were sufficient to allow formation of syncytia upon co-culture with 50,000 VB cells in a volume of 60 ul RPMI 1640 supplemented with heat-inactivated 10% fetal calf serum at a rate and frequency similar to that previously reported for the reference isolate HXB2 scored at four, six and twenty-four hours after co-culture: -, no visible syncytia or pre-syncytial aggregates observed in duplicate wells, 1-4, graded increase in syncytia to the maximum seen in the absence of treatment with peptide or anti-Leu 3A CD4 antibody.
  • Syncytial scores shown are far the end of
  • Table VII Comparison of CD4(83-94)BZL potency to inhibit HIV- induced cell fusion of VB indicator compared to acutely activated, fresh huinan peripheral blood inononuclear cells.
  • the post-resin peptide mixture obtained from the synthesis of the desired peptide TYIC bzl EVEDQKEE was pre-incubated for 30 minutes at 37oC at the nominal concentrations shown.
  • Cells and peptide were combined with either VB cells or phytohemagglutinin (PHA) stimulated PBMCs and cultured at 37°C for 24 hours, at which tim-e syncytia were scored.
  • PHA phytohemagglutinin
  • the peptide mixture was synthesized on an Applied Biosystems, Inc.430A Automated Peptide Synthesizer.
  • the synthesizer was programmed to couple to a PAM-glutamlc acid resin (0.5 mmol glutamic acid equlvalentz) the amino acids E,K,Q,D,E,V, E,C,I,Y,T,D,S,D,E,I,K, and L as the tBoc, R-blocked derivatives shown in the dynamic run file attached. Double-coupling cyclcs were run for S.D.E.I, K and L (the last six amtno acids of the synthesis).
  • This material constitutes past-resin peptide H, or peptide H mixture, comprising 1) the desired peptide sequence LKIEDSDTYICEVEDQKEE, 2) derivatives of this sequence Including R-protecting groups not removed during HP cleavage, R-protectiog groups or scavengers obtained upon re-adduction during cleavage, 3) deletion peptides generated by premature chain termination during synthesis 4) rearrangements of R-gro ⁇ ps (e.g.
  • gluumine desmidation pyroglutamyl ring formation, beta-elimination etc.
  • peptide backbone e.g. isopeptide formation
  • TYIC(benzyl)EVEDQKEE was the desired peptide, and the corresponding input protected amino acids were the same except for substitution of N-tBoc-S-methylbenzylcystelne by N-tBoc-S-benzylcystelne, and omission of p-thlocrcsol during, the cleavage reaction.

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Abstract

A new concept of inhibiting formation of liquid-receptor complex by antireceptor molecule or derivative thereof is described. A new method of treating HIV infection is also disclosed.

Description

NEW ANTI-RECEPTOR PEPTIDES AND THERAPEUTIC AGENTS
This is a continuation in part of the application Serial Number 07/182,109 filed April 15, 1988 which is a continuation in part of the application Serial Number 07/107,994 filed October 14, 1987. Technical Field:
The present invention is related generally to synthesis of peptide based antireceptors. Antireceptors are fragments of receptor proteins, or derivative of such fragments, which include the ligand-binding region of the receptor protein, and which therefore act to block the interaction of ligands and their receptors by binding to the ligand and preventing its attachment to the native receptor molecule. More specifically, the present invention is related to fabrication by automated solid-phase peptide synthesis, and acid cleavage of the peptide from the solid-phase resin under controlled conditions, to produce a peptide mixture comprising authentic desired peptide, and deleted and/or derivatized (partially deprotected) congeners of these peptides which may, due to steric constraints or increased nonspecific binding, have a higher affinity for the receptor ligand than the unmodified peptide sequence itself. Thus, the process of fabricating antireceptors comprises synthesis of a series of peptides spanning the entire theoretical binding area of a given protein receptor molecule, and testing post-resin peptide mixtures to identify and select, by further purification, peptide derivatives which can function as antireceptors.
Background of the Invention;
A number of ligands including viruses, interact with cells via receptors. The formation of the ligand- receptor dyad is believed to be the first step in the initiation of biological response, such as viral infection, signal transduction, cell proliferation, cell fusion ad the like. The present invention takes advantage of the proposition that synthetically designed molecules or agents which possess high affinity for binding to ligands, specifically at their receptor-binding epitopes, would block the interaction of the ligand to the receptor, thereby inhibiting the initiation of biological responses caused by the ligand.
It should be noted that this approach is quite distinct from the antigen-antibody mechanism where an antigenic ligand induces the production of antibodies in an immune-responsive system and then these antibodies bind to the epitopic site of the antigen to block the biologic response of the antigen. In contrast, the present invention is not dependent on the nature of the antigen at all. Rather, in accordance with the present invention, it is the receptor molecule which is analyzed and based on such analysis anti-receptor molecules are synthesized which block the receptor-ligand interaction.
It has previously been reported that synthetic peptides, which are derivatives of ligands, function more potently and/or efficaciously than their parent peptides as either agonists (J.E. Rivier, J. Polrter, C.L. Rivier, M. Perrin, A. Corrigan, W.A. Hook, R.P. Saraganian and W.W. Vale, J. Med. Chem. 29, 1846 (1986) or antagonists (C.D. Richardson, A. Scheid, and P.W. Choppin, Virology 105, 205 (1980) of ligand-receptor interactions. It was, therefore, appropriate to determine if derivatives of receptors might function more potently and/or efficaciously than their parent peptides in inhibiting ligand-receptor interactions.
SUMMARY OF THE INVENTION It is, therefore, an object of the present invention to synthesize modified or unmodified receptor fragments, or mixture thereof, which specifically block the interaction of the receptor with its ligand or ligands, that is to act as antireceptors. It is a further object of the present invention that in cases where there are multiple ligands for a single receptor, which ligands may interact with dif ferent specific regions of the receptor, that such antireceptors would inhibit selectively the interaction of one, or one class, of ligands for the receptor, without affecting the interaction between the receptor and other (or other classes) of ligands.
It is an additional object of the present invention to synthesize antiviral agents including modified or unmodified region(s) of a receptor which specifically block the receptor-ligand interaction without affecting other functions of said receptor, for example immunosuppression without antiviral effect and antiviral effect without immunosuppression.
It is a still further object of the present invention to provide a method for rational drug designing which spares the normal receptor function, but inhibits the binding of a ligand to the receptor. The drug design includes sparing class II cytotoxicity or deleting class II B-activation.
It is another object of the present invention to identify the anti-receptor structure and modify the same to increase its binding affinity by such methodology as addition, deletion, derivatization and the like.
It is yet another object of the present invention to provide unique anti-viral agents inhibiting viral infectivity, particularly of human immunodeficiency virus, HIV-1, HIV-II, SIV and the like.
It is yet another object of the present invention to provide isolated, substantially pure, anti-receptor polypeptides or derivatives thereof, useful as therapeutic agents for those anomalous conditions which result from ligand-receptor interaction.
Other objects and advantages will become evident from the following detailed description of the invention. BRIEF DESCRIPTION OF THE DRAWINGS
These and other objects, features and many of the attendant advantages of the invention will be better understood upon a reading of the following detailed description when considered in connection with the accompanying drawings wherein:
Fig. 1.A-C show the appearance of CEM-SS cells following inoculation with HTLV-IIIB, in the presence or absence of continuous treatment with peptide CD4(83- 94)BZL, and are photomicrographs (25X) of individual microtiter wells from a typical CEM-SS assay demonstrating HTLV-IIIB induced syncytium in the presence and absence of CD4(83-94)BZL. Fig. 1A illustrates microtiter well containing virus-induced syncytia after one hour inoculation with HTLV-IIIB in the absence of peptide followed by removal of virus and cell culture for five days. VO = 150. Fig. 1.B illustrates virus surviving of fraction Vn = 10, at a final peptide concentration of 16
M. Fig. 1.C illus-trates virus surviving fraction, Vn =
O, at a final peptide concentration of 125 M. The peptide preparation CD4(83-94)BZL was incubated with the virus inoculum for 60 minutes after which the peptide-virus reaction mixture was incubated with the adherent
CEM-SS cells for an additional hour. Virus-peptide- containing medium was removed and replaced with fresh complete medium containing CD4(83-94)BZL at the same concentration. The number of syncytia listed above are counts taken from the entire microtiter well.
Fig. 2 represents chromatographic fractionation of synthetic CD4(76-94), including bioactivity, and UV-absorbing species characterized by FAB-Mass spectrometry.
A typical chromatogram of 1.8 mg of CD4(76-94) on a Vydac C8 (10 × 250 mm) bonded-phase semi-preparative column is shown. Material was post-resin CD4(76-94) dissolved in 10 mM ammonium acetate at pH 7.0. Mobile phase was (A) ammonium acetate buffer and (B) 20% ammonium acetate buffer/80% acetonitrile. The percentage of B in the mobile phase was varied as shown (dashed line). Material eluting at retention times 2-3, 3-4.5, 4.5-5 and 5-8.5 minutes was pooled from several semi-preparative runs, lyophilized, weighted and submitted to bioassay at nominal concentrations of 500 to 30 μM, in the fusion assay. Bioactivity (hatched bar) is expressed as doses of anti-syncytial activity per fraction. One dose is the smallest amount of material necessary to completely inhibit fusion between 50,000 HTLVIIIB/H9 cells and 50,000 VB indicator cells over a twenty-four hour period under standard assay conditions. Aliquots of the major peak (3 to 4.5 minutes retention time) and the area of the chromatogram in which bioactive material eluted (5-8.5 minutes retention time) were submitted to fast atom bombardment-mass spectrometric analysis as described . The major peak ( 3-4.5 min retention time) gave a parent fragment mass (M+H = 2287) consistent with the mass of the desired peptide LKIEDSDTYICEVEDQKEE as well as a fragment of mass 2269, the mass of the parent fragment minus H2O (18 atomic mass units). The biologically active material eluting at 5-8.5 min retention time exhibited a complex mass spectrum containing the parent M+H (2287) and multiple higher-molecular weight peaks consistent with extensive derivatization of the parent peptide (data not shown) .
Fig. 3a is an FAB mass spectrograph of major peak No. 4 of the chromatogram of Figure 3.C, discussed below.
Fig. 3b is an FAB mass spectrograph of major peak No. 7 of the chromatogram of Figure 3.C, discussed below. Fig. 3c represents chromatographic fractionation of S-benzylCD4(83-94).
Post-resin material from the synthesis of S-benzyl-CD4(83-94) was employed. The desired peptide was TYICbzlEVEDQKEE where Cbzl indicates benzylation of cysteine 86 by insertion of 5-Boc-S-benzyl cysteine in place of 5-Boc-S-p-methylbenzyl cysteine in the solid-phase automated synthesis sequence yielding a peptide derivatized at cysteine with a benzyl moiety following HF cleavage of the peptide from the solid-phase resin. 10 mg of the post-resin peptide mixture was applied to the semipreparative column under the conditions described in Fig. 2. Aliquots were taken for both FAB mass spectrometric analysis and bioassay (anti-syncytial activity). Data shown are the absorbance profile at 225 nm (broken line), the anti-fusion activity in each fraction (hatched boxes; dose defined as in Fig. 2), and the mass spectra of the major peak (4) and the bioactive peak (7) resolved by reverse-phase chromatography. The concentration of the seventh peak material required to completely inhibit syncytia formation in the standard fusion assay was 32μm. This concentration was calculated from the weighed mass of the material collected from this region of the chromatograph, and the molecular weight of the desired peptide.
Fig. 4 shows the effects of CD4(1-25) on infection of CEM-SS cells in vitro by various HIV isolates. Numbers in parenthesis are the number of syncytia per well in untreated wells.
DETAILED DESCRIPTION OF THE INVENTION The above and various other objects and advantages of the present invention are achieved by isolated, substantially pure anti-viral agents comprising anti-receptor polypeptides or derivatives thereof which inhibit viral infection and subsequent cell fusion and syncytia formation.
Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. Although any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present invention, the preferred methods and materials are now described. All publications mentioned hereunder are incorporated herein by reference. The term "ligand" and "receptor" as used herein indicate two members of a binding dyad wherein the "ligand" is the component whose binding to the receptor is inhibitable by addition of the antireceptor peptide because the antireceptor peptide binds to the ligand, replacing receptor in the ligand-receptor dyad, and the "receptor" is that region of a molecule (before and after derivatization) which defines an epitope responsible for binding of the ligand and based on which the anti-receptors are tailored. Thus a single macro molecule may have several epitopic sites, hence have several receptor subtype binding domains within the same molecular configuration for binding of several different ligands.
The term "anti-viral agent" as used herein means an agent which is at least in part a polypeptide or a derivative thereof (including conjugate, analog and the like) which inhibits either viral infection or viral induced cell fusion.
The term "substantially pure" as used herein means the product is as pure and homogeneous as can be obtained by employing standard techniques well known to one of ordinary skill in the art.
CD4 (Leu3A/T4) molecule is present on the surface of a subset of human T-lymphocytes which help cytotoxic- and B-lymphocytes during class II-restricted immune response to foreign antigen. The CD4 molecule is also the receptor by which the human immunodeficiency virus (HIV) binds to T-lymphocytes and infects these cells. Since the cloning and sequence of CD4 have been accomplished, this receptor was selected to illustrate the principles and the application of the present invention. Accordingly, several polypeptide fragments containing 7-25 amino acid sequences of the CD4 receptor extracellular domain were synthesized and tested for their ability to inhibit three CD4-mediated functions: (1) Fusion of HIV-infected and non-infected CD4-positive T-lymphoma cells; (2) Infection of CD4-positive lymphoma cells with HIV; and (3) Proliferaton of T-helper-inducer cells in the presence of allogeneic irradiated stimulator cells (the mixed lymphocyte reaction). In addition, the ability of the peptide fragments to inhibit binding of a CD4 antibody, which neutralizes all three of these processes, to the CD4 molecule on the surface of peripheral blood leucocytes, has also been determined in order to map the binding epitope of this antibody.
For convenience, the synthetic peptides and peptide derivatives corresponding to regions of the deduced amino acid sequence of human CD4 have been assigned residue numbers based on the amino acid residue numbers of CD4 [Maddon et al, Cell 42, 93 (1985)]. Peptides and peptide derivatives in the region of CD4 spanning amino acid residues 76 to 94 are referred to herein as follows: CD4(76-94) refers to the desired 19 residue peptide LKIEDSDTYICEVEDQKEE. CD4(83-94) refers to the desired 12 residue peptide TYICEVEDQKEE. S-benzyl CD4 (76-94) and S-benzylCD4(83-94) refer to the desired 19 residue peptide LKIEDSDTYICbzlEVEDQKEE, and its 12-residue congener, in which cysteine protection via benzyl, rather than methylbenzyl, derivatization during solid-phase synthesis yields a final peptide product in which the cysteine residue remains protected (S-benzylated) after HF cleavage.
Material possessing ability to inhibit HIV-induced cell fusion generated from 1) authentic CD4(83-94), authentic S-benzylCD4(83-94) or their 19-residue congeners, by liquid-phase benzyl or methylbenzyl alkylation, or 2) purified by HPLC of post-resin material from synthesis of S-benzylCD4( 84-94) are designated CD4(83-94)BZL or CD4(76-94)BZL. Unfractionated mixtures of the peptide material resulting from the solid-phase synthesis of the desired peptides are referred to as the "post-resin peptide mixture"; for example CD4(76-94) post-resin peptide mixture, or CD4(76-94) peptide mixture.
Seven different polypeptide fragments, each containing 25-amino acid residues of the CD4 molecule, were first examined. None of these fragments, as the pure authentic peptide, inhibits HIV infection, cell fusion or the mixed lymphocyte reaction. However, one of the fragments, corresponding to amino acid residues 51-75 of the CD4, inhibited neutralizing antibody binding to CD4 on intact cells. A derivative of another fragment, corresponding to amino acid residues 76-94, inhibited HTLVIIIB infection of CEM cells, and fusion of HTLV-IIIB-infected and non-infected CD4-positive lymphoma cells, with an IC50 of 60 μM, with no effect on the proliferation of T-helper cells in the mixed lymphocyte reaction. Several other polypeptide fragments and various derivatives thereof were also prepared and tested. The methodology and the results obtained are now described.
MATERIALS AND METHODS Unless mentioned otherwise, all chemicals and reagents were of analytical grade and obtained from commercial sources. The compounds of the present invention are characterized by having a sequence comparable to a sequence of the CD4 molecule, in particular a sequence distal to the N-terminus. The sequence includes the cysteine at position 86 of CD4 at which the sulfur on the cysteine is blocked.
In general, the compound is prepared by reacting underivatized peptide under mild conditions with reagents known to react with mercaptans. These reagents may be active halides, pseudohalides, active olefins, e.g., x,p-enones, such as maleimide, disulfides, or the like. For in vivo use, the derivatizing groups should provide a physiologically acceptable product.
The blocking groups will have from about 1 to about 36 carbon atoms and may be aliphatic, alicyclic, aromatic, heterocyclic or combinations thereof. Usually, the blocking group will have from 0 to 10 hetero-atoms, which may be in the longest chain, as a substituent on a chain or ring atom or the like. For the most part the heteroatoms will be selected from halogen, nitrogen, oxygen or sulfur. Binding of the substituent to the sulfur of the cysteine residue may be via a carbon, or heteroatoms such as nitrogen, or sulfur atom. The bulk of the group immediately distal to the cysteine sulfur and attached directly to the sulfur is preferably less than that of a naphthyl group and greater than that of a linear lower alkanoic acid, most preferably approximately the size of a phenyl group or similar cyclic or heterocyclic group (either aromatic or non-aromatic). The group optionally may be further substituted.
Various groups may be used to block the sulfur, for example, an aryl-containing substituent or a thioether resulting from the reaction between the thio group of the cysteine and a maleimide. The aryl group is preferably selected from 5- and 6-membered aromatic rings containing carbon and 0-1 oxygen or sulfur and 0-3 nitrogen atoms in the ring. Phenyl is a preferred aryl group, e.g., benzyl and naphythyl. The aryl-containing group may be substituted or unsubstituted. Substituents may include alkyl, particularly methyl, halogen, particularly chloro, nitro, etc., where the substituents may be in any position, preferably at the ortho position. The aryl group may have from 0 to 3 substituents, usually not more than 2 substituents, which substituents may be the same or different.
For active olefins used as blocking groups, the olefin will usually be conjugated with a second site of unsaturation, e.g., a carbonyl group. Acyclic groups, maleimido groups, conjugated polyolefins, or the like may find use.
For disulfide formation, precursor disulfides will be employed which have a convenient leaving group, which is displaced by the cysteine to form a new disulfide bond. When using reagents known to react with mercaptans, intramolecular disulfides formed from another cysteine of a contiguous CD4 peptide chain are excluded. It is also desirable to have a functionality present on the blocking group which allows for linking to another molecule, e.g., carboxy, carboxy ester, or the like. The carboxy may then be activated with a carbodiimide, carboxy diimidazole, or the like for reaction with an amine or alcohol, for example, a protein.
Examples of reaction compounds for preparing derivatives of the CD4 molecule and fragments thereof include the following, wherein the group bound to the sulfur of cysteine 86 may be one of the following groups:
(a) alkyl and substituted alkyl compounds: X-CH2(CH2)n where n = 0 - 20 and X is selected from H;OH;OCH3;SH;SCH3;NH2;NHCH3;N(CH3)2;SO3H;SO2CH3; or halogen, being hetero only when n is other than 0.
(b ) cycloalkyl and substituted cycloalkyl compounds:
Figure imgf000013_0001
where n = 1-10 and a hydrogen on any of the ring carbons is replaced by X as described in (a) above.
(c) aromatic or substituted aromatic compounds:
Figure imgf000013_0002
where n = 1-5 and X is as described in (a) above.
(d) polyaromatic or substituted aromatic compounds:
Figure imgf000013_0003
where n = 1-3 and X is as described in (a) above .
(e ) heterocyclic or substituted heterocyclic compounds such as ( i) substituted pyridyl, ( ii ) imidazole or (iii) quinoline:
Figure imgf000014_0001
where n = 0-3 and R is a pair of electrons; H; alkyl of 1-2 carbon atoms; or 0.
Figure imgf000014_0002
where n = 0-3 and R is selected from C6H5; CH3; or H.
Figure imgf000014_0003
where R is a pair of electrons; H; or O. (f) maleimide adducts such as m-maleimidobenzoylN-hydroxysuccinimide ester; m-maleimido-benzoylsulfosuccinimide ester; N-succinimidyl4-(p-maleimidophenyl)-butyrate; N-succinimidyl4-(N-maleimido-methyl)-cyclohexane-1-carboxylate; or sulfosuccinimidyl-4-(N-maleimidomethyl) cyclohexane-1-carboxylate; bismaleimidohexane; bismaleimidomethyl ether; or N-Y-maleimidobutyryloxysuccinimide.
(g) thio-containing compounds such as :
Figure imgf000014_0004
where X is N3; OH; OR; NH2; NHR; NO2; SH; SR; halogen;
CO2H; or aryl of from 6 to 12 carbon atoms; and
R-S- where R is alkyl or substituted alkyl.
(h) amino acids or oligopeptides. (i) cytotoxic agents such as alkylating agents, for example pipobroman; thio-TEPA; chlorambucil; cyclophosphamide; nitrogen mustard; mephalan; or uracil mustard.
(j) membrane-perturbating agents, for example adriamycin; ionophores, such as valinomycin; or surface active agents, such as detergents.
(k) anti-retroviral agents such as 5-azidothymidine (AZT); dideoxycytidine (DDC); dideoxyadenosine (DDA); or dideoxyinosine (DDI).
In some instances, particular derivatives may be cytotoxic, in which case these derivatives may be modified to reduce cytotoxicity or substantially eliminate toxicity at pharmacologically active dosage levels. A preferred peptide in accordance with the present invention comprises substantially the same sequence as CD4 amino acids of the sequence 85 to 92, usually 83 to 94, and more particularly 81 to 94, conveniently 76 to 94 where the sequence may be further extended by as many as 10 amino acids or more at either terminus, where the extension amino acids may be the same or different from the CD4 sequence. The sequence will usually have at least greater than 2 amino acids of the natural sequence on each side of the cysteine. The numbering of the amino acids is as set forth in Maddon et al., Cell (1985) 41: 93-104. The peptide sequences may be modified by terminal amino acylation, for example, acetylation; carboxy amidation, for example, with ammonia, methylamine and the like. It will be appreciated that the amino acid sequence need not correspond exactly to the sequences given above, but may be modified by from 1 to 3 conservative or non-conservative mutations, including deletions and insertions involving not more than about 1 amino acid, without significantly affecting the activity of the product. Therefore, the polypeptides may be subject to various changes, such as insertions, deletions, and substitutions, either conservative or non-conservative, where such changes provide for advantages in their use. Conservative substitutions include combinations such as gly, ala; val, ile, leu; asp, glu; asn, gin; ser, thr; lys, arg; and phe, tyr, trp. Usually, the sequence will not differ by more than 20% from the sequence of the epitope of the CD4 molecule except where additional amino acids may be added at either terminus for the purpose of providing an "arm" by which the peptides of this invention may be conveniently linked for immobilization. The arms will usually be at least about 5 amino acids and may be 50 or more amino acids.
The peptides of the present invention may also be conjugated with or linked to a soluble macromolecular entity. Conveniently, the macromolecular entity may be a polypeptide, either, naturally occurring or synthetic, to which antibodies are unlikely to be encountered at high levels in human serum. Illustrative polypeptides include poly-L-lysine, bovine serum albumin, keyhole limpet hemocyanin, bovine gamma globulin and the like. The choice is primarily one of convenience and availability.
The conjugates will generally comprise at least one molecule of the peptide of the present invention per macromolecule and usually not more than about 1 per 0.5 kDal and preferably not more than about 1 per 2 kDal of the macromolecule. Of course, one or more different peptides may be linked to the same macromolecule.
Conjugation or linking may be accomplished by any conventional method employing such reagents as p-maleimidobenzoic acid, p-methyldithiobenzoic acid, maleic acid anhydride, succinic acid anhydride, glutaraldehyde and the like. The linkage may occur at the N-terminus, C-terminus, or at a site intermediate to the ends of the molecule. Furthermore, peptide may be derivatized for linking or linked while bound to a support, or the like.
The peptides can be prepared in a wide variety of ways. The peptides, because of their relatively short size, may be synthesized in solution or on a solid support in accordance with standard techniques. Various automatic synthesizers are commercially available and can be used in accordance with known protocols. See for example, Stewart and Young, Solid Phase Peptide Synthe sis, 2nd Ed., Pierce Chemical Company, 1984; and Tam et al., J. Am. Chem. Soc. (1983) 105:6442.
Alternatively, hybrid DNA technology may be employed where a synthetic gene may be prepared by employing single strands which code for the polypeptide or substantially complementary strands thereof, where the single strands overlap and can be put together in an annealing medium so as to hybridize. The hybridized strands may then be ligated to form the complete gene and by choice of appropriate termini, the gene may be inserted into any suitable and readily available expression vector. See for example, Maniatis et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, 1982. Alternatively, the region of the genome coding for the peptide may be cloned by conventional recombinant DNA techniques and expressed (see Maniatis, et al, supra).
DNA coding sequences based upon the known sequence for CD4 may also be used to obtain the peptide. Fragments from these sequences may be employed for expression of peptide fragments, conservative base changes may also be made, where the modified sequence(s) code for the same amino acid(s), or non-conservative changes in the coding sequence may be made, where the resulting amino acid may be a conservative or non-conservative entity.
The coding sequence may be extended at either the 5'- or 3' - terminus or both termini to extend the peptide, while retaining its epitopic site. The extension may provide for an arm for linking, for providing antigenic activity, or the like.
For expression, the coding sequence is provided with start and stop codons, promoter and terminator regions and usually a replication system to provide an expression vector for expression in a cellular host, for example prokaryotic or eukaryotic, bacteria, yeast, mammal and the like. Once the peptide has been expressed by recombinant DNA methods, and purified to a suitable degree, the thio group may be blocked with any convenient reagent which replaces the hydrogen of the mercaptan of the cysteine. As indicated for thioethers, active halogens, active pseudohalogens or active olefins may be used. The reaction temperature may range from about 0 to about 50° C, usually 10-30° C, with the reaction time ranging from about 0.5 to 24 hours. Polar solvents, particularly aqueous solvents, may be employed and organic solvents may be present up to about 60 volume %. Organic solvents include acetonitrile, acetone, diethyl ether, dimethyl- formamide and the like. With active halides, a mild basic acid acceptor is usually required such as carbo- nate, bicarbonate and the like. Generally an excess of the blocking agent is employed.
To block with a thio group, various disulfides may be employed, such as methyldithio, p-nitrophenyldithio, 2-pyridyldithio and the like and the second sulfur may be joined to a methylcarboxy ester, aryl or other convenient group. The conditions for displacement are well known to one of ordinary skill in the art and need not be illustrated here.
After the reaction is complete, the product is isolated and purified according to standard conventional techniques.
The peptides of the present invention and compositions may be used in vitro and in vivo. In vitro, the compounds or compositions may be employed for detecting the role of CD4 in viral infection, preventing infection of CD4-bearing cells including T cells and macrophages susceptible to HIV, inhibiting CD4-dependent viral cytopathic effects and the like. In vivo, the compounds or compositions of the present invention may be used prophylactically or therapeutically for preventing infection or inhibiting proliferation of the virus and infection of or cytopathic effects on additional T cells or other CD4-bearing cells by inhibiting HIV-CD4 interactions related to clinical manifestation of viral disease. The composition can be made with any suitable pharmaceutically acceptable carrier and can be administered in any suitable anti-viral amount by any suitable route such as intramuscularly, intraperitoneally, intravenously, parenterally, intranasally, topically, orally and the like. Any physiologically acceptable medium may be employed, such as deionized water, saline, phosphate buffered saline, aqueous ethanol, and the like. The effective anti-viral amount of the active ingredient(s) will depend upon the solubility, particular use, route and frequency of administration, and the like. The amount used will also depend upon the relative antisyncytial activity of the composition employed. Generally, the dosage will be in the range of about 0.2 mg to about 500 mg, preferably in the range of about 10 mg to 100 mg. The following specific examples are illustrative. A. Preparation by Peptide Synthesizer: Synthesis of target peptides and their derivative products was carried out on an Applied Biosystems, Inc., Model 430A Peptide Synthesizer, essentially as described in the User's Manual supplied by the manufacturer of the machine. Synthesis begins with the alpha-amino deprotection of the first (C-terminal) amino acid in the chain, which is linked to the polystyrene/divinylbenzene-cross-linked resin via a 4 (oxymethyl) phenylacetamidomethyl bridge. Activation occurs in trifluoroacetic acid/dichloromethane (TFA/DCM), followed by neutralization in N,N-diisopropylethylamine/N,N-dimethylformamide (DIEA/DMF), and washing in DMF. Addition of the next amino acid residue occurs by mixing in the reaction vessel (RV) the deprotected resin-linked growing chain, and activated incoming amino acid (N- and R-blocked) in DMF. The activated incoming amino acid is prepared by (1) dissolution of the amino acid with alpha aminα protected with t-butyloxycarbodi imide (DCM); (2) addition of 0.5 equivalents of dicyclohexylcarbo-diimide (DCC) to form the symmetric anhydride; and (3) transfer to the concentrator and DCM/DMF exchange. Dicyclohexylurea formed in the reaction is left in the activation vessel and is dissolved in methanol and discarded prior to the activation of the next amino acid in that vessel. Some fragments are prepared as esters of 1-hydroxybenzotriazole (HOBT) in the activation vessel prior to the concentration and coupling. Each step ends with N-deprotection, neutralization and washing of the resin. Functional groups on the amino acid side chain are blocked during synthesis by side-chain derivatization of each amino acid and esters or amides of: Tos (R,H), O-benzyl (D,E), benzyl (S,T, in some cases C) Br-Z (Y), Cl-Z (K), or 4-Me-benzyl (C).
Following synthesis, the peptide is cleaved from the resin by treatment with HF at 0°C for two hours with stirring, with the addition as specified of anisole, thioanisole, p-cresol, dimethylsulfide (DMS). HF and other volatile components were removed under vacuum, resin and peptide rinsed with ethyl ether, peptide dissolved in ammonium acetate, and resin removed by filtration. After lyophilization, the peptide mixture, including side-chain protected and unprotected fulllength peptide deletion sequences, anisolated peptide, and rearranged and oxidized peptide was designated "post resin peptide X". After dissolution in 10% acetic acid or ammonium acetate and passage over G-10 Sephadex and G-25 Sephadex, respectively, to remove low-molecular weight side products including trace amount of scavengers, the mixture was designated "post-G-10 peptide X". After dissolution in 0.1% TFA or ammonium acetate and chromatography on reverse phase HPLC, the individual components were designated "post-HPLC peptide X peak (or fraction) Y", or simply "post-HPLC peptide X" if a peak comprised a single pure authentic peptide by amino acid analysis. Edman degrading sequencing and/or fast atom bombardment mass fragmentography (see Appendix A for specific conditions).
Peptides were then submitted to one or all of the following four tests. Some of the peptides were also derivatized, after purification, by incubation with alpha-bromo-toluene or alpha-bromo-xylene to obtain the benzylated adducts of cystein residues within the peptide (Erickson et al, J. Amer. Chem. Soc. 95:11, 1973). A typical protocol for derivatization (post-synthesis alkyl benzylation) is as follows: About 5 mg (2.2 mol) of peptide of interest (such as H, post HPLC shown to be authentic human CD4 76-94 by FAB mass fragmentography and Edman sequencing) was placed in the flask, and about 1.5 ml triethylamine and about 1.22 mg 4-methylbenzyl bromide (6.6 mmol) was added. Reaction mixture was stirred for sufficient time (6-16 hrs.) at 25°C, vacuum evaporated for about 1.5 hrs., re-suspended in 0.01 mM ammonium acetate, pH 7.0, extracted with one volume of chloroform if necessary, and the resultant aqueous phase lyophilized. The lyophilized material was reconstituted in PBS and tested for anti-fusion activity in the assay of Lifson et al, (Nature 323:725-728, 1986).
B. Fusion assay: Post-resin, post-G-10 or post-HPLC peptides were dissolved in phosphate-buffered saline to a nominal concentration (based on the molecular weight of the desired underivatized peptide) of 1000 μM and two fold dilutions of this concentration down to 10 μM . Peptides were added, in a volume of 50 μl , to 25 μl of RPMI 1640/20% fetal calf serum containing 50,000 H9/HTLVIIIB cells in 96 well flat-bottomed culture dishes and incubated at 37°C for 30 minutes, after which time 50,000 VB cells in 25 μl culture medium were added. Cell fusion was scored at 1-24 hours as described by Lifson et al, supra.
C. Syncytial Center Assay; 50 μl of each peptide in PBS was mixed with 50 μ l of 50-280 syncytial-forming units (SFUs) of HTLV-IIIB, RF or CC virus in RPMI 1640. Tubes were incubated at room temperature (about 22°-25°C) for 60 minutes, and 40 μ l aliquots of each used to inoculate CEM cells. After an hour at 37°C, inoculum ws removed, minitray well fed 100 μl of fresh RPMI mediums, and syncytial centers scored at day 2 post-infection. In some experiments, supernatants were harvested at day two for measurement of the viral antigen p24 as an additional confirmation of blockage of infection. D. Inhibition of antibody binding to CD4+ cells estimated by FACS: VB CD4+ cells in 10 μ l of medium are added to 100 μl of the anti-CD4 antibody S3.5 labeled with FITC, and previously incubated at 37°C for one hour with 500 μ M peptide. S3.5 is a murine IgGI monoclonal antibody which binds to the CD4 molecule within the Leu3A/OKT4A epitope cluster and block HIV infection as well as other CD4-dependent T-cell functions. Sufficient S3.5 is added to cells to saturate their CD4 antigen. Cells are incubated an additional 45 minutes at 37°C and analyzed by flow cytometry.
E. Mixed Lymphocyte Reaction (MLR) : Peripheral blood mononuclear leucocytes were separated from heparinized blood from healthy donors by Ficoll-Hypaque centrifugation. Stimulator cells from donor 1 were irradiated to 3000 rad and 50,000 cells mixed with 50,000 non-irradiated responder cells from donor 2, in 200 μ l RPMI/10% pooled male human AB serum. Peptides were added to a final concentration of 100 /im. Reactions were performed in triplicate for each stimulator-responder pair, in the presence and absence of peptides. Mixed cells were cultured at 37°C for 6 days in 10% CO2. One μCi of H-thymidine was added, the cells cultured overnight (about 12-16 hours at 37°C) and harvested on glass fiber filters and counted. The results are summarized in Tables I, II and
III. In Table I, the structure of the peptide synthesized, its degree of purity upon testing, and its activity in each of the four assay systems examined are given. In Table II, the activities of various deletions from the 19 mer which were active in the initial screen to inhibit fusion of HTLVIIIB infected and noninfected CD4-positive T-lymphoma cells are given. Table III shows the effect of anti-receptor polypeptide (H) of the present invention on syncytium formation by three different infectious viral stocks of HIV.
Figure imgf000024_0001
a) structure given by amino acid residue numbers in CD4. If modified, preceded by one letter symbol for the added amino acid. Letter which follows slash is the code letter for a unique synthetic preparation. b) all post-G-10 preparations give a predominant peak on HPLC. H post HPLC is a single peptide of sequence CD476-94 without derivatization, as confirmed with amino acid composition, sequence (Edman), single peak on HPLC, and FAB mass fragmentography. c) dose given is that required to completely inhibit fusion at 24 hours in the standard assay. n.a. not active at 500μM, the highest dose tested. d) dose given is that required to decrease the number of syncytial-forming centers two days after infection by more than 90%. n.a., not active at 500 μM, the highest dose tested. e) all compounds tested at 100 μM, none inhibit MLR at this dose. f) dose given is that required to decrease S3.5 binding to CD4-positive cells more than 50%, measured by flow cytometry. n.a. not active at 100 μM, the highest dose tested. Table II
Anti-syncytial activity of deletants and altered-sequence variants of CD4cys-benzyl(75-94) define a core anti-synctyial peptide.
Figure imgf000025_0001
Peptides were tested as post-resin peptide mixtures as described. Anti-syncytial activity was assessed as described in the text. Not active indicates no anti-syncytial activity at early (6 hours) or late (24 hours) time points at the highest dose tested, 500 μM .
TABLE IIA
Post-synthesis benzylation of S-benzyl-( ZD4(83-94) imparts anti-syncytial activity to the peptide.
A.
B.
C
Figure imgf000026_0001
The anti-syncytial activity of three preparations of CD4(83-94)BZL were compared. The three preparations were A. TYICbzlEVEDQKEE, the peptide mixture obtained as described in Figure 3 by solid phase synthesis of the desired peptide TYIC(S-benzyl)EVEDQKEE, B. The purified peptide S-benzyl-CD4(83-94) obtained by HPLC fractionation of the peptide mixture described in A., C. The peptide mixture obtained by liquid-phase derivatization of B. afforded by addition of 7.1 mol of alpha-bromoxylene to 2.2 mol of S-benzyl-CD4(83-94) dissolved in 1.5 ml of triethylamine followed by stirring at room temperature for 16 hours, removal of volatile material under vacuum, dissolution in 10 mM ammonium acetate, pH 7.0, extraction with one volume of chloroform, and repeated lyophilization of the resultant aqueous phase.
Table IIB.
Anti-syncytial activity of CD4(76-94) as Benzyl or Xylyl Derivatives.
Figure imgf000026_0002
5 mg of CD4(76-94) purified by HPLC as described in Figure 2 was submitted to chemical derivatization as described. Resultant peptide derivatives were evaporated to dryness, reconstituted in water, extracted with one volume of chloroform, and the aqueous phase lyophilized and tested for anti-syncytial activity in the standard assay.
Potency is expressed as the lowest concentration of the peptide mixture (nominal concentration based on mass of the input peptide and formula weight of the parent peptide LKIEDSDTYICEVEDQKEE) capable of complete inhibition of HIVHXB-2-induced cell fusion. Not active, no anti-syncytial activity at <500 M. Table III
Inhibition of Viral Infection of CEM cells by anti-receptor Polypeptide "H".
Figure imgf000027_0001
a) each fresh (CC) or frozen (IIIB, RF-2) viral stock was brought to room temperature, diluted 1:1 with peptide in PBS, and allowed to stand for 60 min at room temp. This mixture then added to CEM cells in micro-titre wells. Incubation at 37°C for 60 min was followed by a rinse. Cells then allowed to grow to confluent monolayer over next 48 hours. Number of syncytial centers per well counted. b) % inhibition syncytia formation equals 1, minus the number of syncytium counted in the presence of the peptide divided by the number of syncytia in the control (untreated, infected) wells, times 100.
The chemical purity, activity, stability and other properties of the synthetic peptides prepared in accordance with the present invention are now described. The amino acid sequences are shown in single letter code.
It is noted that a number of various fragments of CD4 receptor did not show any activity at all (data not shown) indicating that a specific molecular structure and configuration are required. As shown hereunder, two preparations (post-G10 H and peptide E) were found to be effective as the inhibitor of ligand-receptor interaction (vide infra). UCIEDSDTYICEVEDQKEE (CD76-94)
Peptide H Cleavage conditions were 1 ml thioanisole, about 20 ml HF. Tested as a post G-10 (one major peak on analytical HPLC, no other peaks visible). This material is active in the fusion assay. It has the correct sequence by Edman degradation sequencing (note no cys in this sequencing method). Peptide H(r): Resynthesis of peptide H.
Cleavage conditions were 1 ml thioanisole, about 20 ml HF, same as for H. Post resin mass spec shows molecular ion within a complex spectrum, and -HOH (dehydro) ion as well. Post G-10 (100 mg on, 14 mg recovered from 10% acetic acid chromatography) . Mass spec post G-10 shows dehydro peak, no sign of parent peak. The post G-10 H(r) showed complete inhibition of fusion at 100 M at 2 and 4 hours but some breakthrough overnight, and complete inhibition of fusion at 500 A.M 2, 4 and 24 hours. Peptide Bzl H: On-line benzylation, with tBoc- Cys-bz . Taken from resin with HF in two batches. First batch gave about 40 mg, active in fusion assay at 60 μM. Second batch gave about 270 mg, active in fusion assay at 120 μM. TYICEVEDQKEE (CD83-94)
Peptide Bzl H8-19: Synthesis with bzl Cys instead of methylbzl Cys. Potent as crude resin at 120 μM in fusion assay.
Synthesis of Peptide H Analogs
A series of peptide H analogs including those with substitutions other than a benzyl group on cysteine residue number 86 were also synthesized. The following methods were employed.
Method 1. One and one-half mg of purified peptide H was dissoved in 120 μl acetonitrile plus 150 μl deionized water and 60 μ l sodium bicarbonate (0.5 N). Acetonitrile, 200 μ l , was added followed by a 40 molar excess of benzyl bromide or other reaction compound (see Table 2). The mixture was incubated at room temperature for 1 hr, then 2 μl of triethylamine was added to the reaction mixture which was further reacted at room temperature (about 22°-25°C) for 1 hr. Forty microliters of ammonium bicarbonate (1 M) was added, then 1 hr later the reaction mixture was reduced to dryness in a centrifugal vacuum concentrator. The desired powder was reconstituted in PBS and used directly in the cell fusion assay (vide supra).
Method 2. This method is identical to Method 1 except that the addition of triethylamine was avoided in the reaction. The dry powder was dissolved in PBS plus 10% tetrahydrofuran and an equal volume of chloroform. The mixture was vortexed, then the water layer and interface were collected and used for bioassay.
Method 3. One mg of pure peptide H was dissolved in 400 μl of 60% acetonitrile and 40-80 μl sodium bicarbonate (0.05 M). An eight molar excess of benzyl bromide or other reaction compound (see Table 4) was then added to the peptide H solution and reacted at room temperature for 6 hrs. After completion of the reaction, the product was dried by centrifugal vacuum concentration and dissolved in 5 mM sodium bicarbonate. Then one volume of PBS was added. The solution was further mixed with an equal volume of chloroform and allowed to partition by mixing of the solution. The chloroform layer was removed and the aqueous phase used for bioassay. The results are shown in Table IIIA.
Figure imgf000031_0001
1 Preparations tested were not homogeneous by HPLC. The sequence shown is the nominal peptide sequence expected for the dominant synthetic product. 2 500 μM was the highest concentration tested.
The most effective derivatives of peptide H were those prepared using benzyl bromide, 2-chlorobenzyl bromide, 4-(N-maleimidomethyl) cyclohexane-1-carboxylic acid N-hydroxysuccinimide ester or 3-(2-pyridyldithio) propionic acid N-hydroxysuccinimide ester. The two derivatives prepared using naphthyl reaction compounds were ineffective at the concentrations tested. Benzyl cysteine, including "N-term"-T-BOC-blocked and CBZ- blocked "N-term" blocked benzyl cysteine, had no effect on HIV-induced cell fusion at any concentration tested (up to 500μM). Demonstration that multiple derivatization of the parent 12-mer peptide structure produces biologically active (anti-viral) material.
Biologically inactive, pure TYIC(benzyl)- EVEDQKEE was solution derivatized as follows: Purified S-benzyl-TYICEVEDQKEE (2.2. μmol) was dissolved in 1.5 ml triethylamine to which was added 7.12 μmol of alphabromoxylene. The solution was stirred at room temperature for 16 hours, and volatile material removed under vacuum. Remaining material was dissolved in 10 mM ammonium acetate, pH 7.0, extracted with one volume of chloroform, and repeatedly lyophilized. The resultant material was active at a nominal concentration of 250 μM in the standard fusion assay. Synthesis of Peptide E.
The peptide of sequence corresponding to CD4(1- 25) and including an N-terminal tyrosine residue (YQGNKWLGKKGDTVELTCTASQKKS) was synthesized exactly as described for peptide H, and the post-resin peptide mixture (exactly as described for peptide H) was dissolved in phosphate-buffered saline and tested for anti-syncytial and anti-infection activity in two standard assays described herein supra. The peptide mixture was without effect to inhibit HIV-induced cell fusion, but the mixture inhibited infection of CEM-SS cells as measured in the syncytial-forming quantitative microtiter assay, using four isolates of HIV-1 as shown in Figure 4. The data are for peptide incubation with virus 30 minutes before inoculation, peptide presence during the 60 minute inoculation, and no peptide present during the following 5-6 days prior to counting syncytia in each cell culture well.
As shown herein, cysteine is one candidate for a residue within the sequence of CD4(76-94) that could be benzylated in the reaction performed. The importance of the cysteine residue, whether derivatized or free, in generation of biological activity upon synthesis of CD4(76-94) was confirmed by the synthesis of serinyl and alanyl congeners of CD4( 83-94) and the phenylalanyl congener of CD4(76-94)amide. Substitution of the amino acids serine or alanine for cysteine in otherwise identical solid-phase syntheses of CD4(76-94) or CD4(83-94) resulted in peptide mixtures without detectable anti-syncytial activity (Table 5). The phenylalanyl congener of CD4( 76-94) amide was likewise inactive. In view of the comparable activity of the CD4(76-94) synthetic mixture and the benzylated peptides, several peptide mixtures were synthesized as S-benzyl cysteine congeners of CD4(76-94). In these syntheses, the cysteine residue is added to the growing peptide chain as t-Boc-S-benzylcysteine rather than t-Boc-S-methylbenzyl-cysteine, and remains largely S-protected after HF cleavage, compared to complete or nearly complete removal of the S-methylbenzyl block group used in the previous syntheses of CD4( 76-94). In several independent syntheses, the peptide mixture obtained after automated synthesis of the desired peptide S-benzylCD4(83-94) was approximately three-fold more potent to inhibit HIV-induced cell fusion than the peptide mixture obtained after synthesis of CD4(83-94) using t-Boc-S-methylbenzyl-cysteine. A series of deletion peptides were synthesized using t-Boc-S-benzyl-protected cysteine, and tested as inhibitors of HIV-induced cell fusion. The results indicate that the core sequence for this biological activity is CD4(83-89) (Table 5). Furthermore, it was found that the biological activity requires the correct sequence of the core peptide, as well as derivatization, since a nineteen-residue peptide with the same composition but slightly altered sequence compared to CD4(76-94) had no activity as an anti-syncytial agent. The activity was attributable to peptide material, since proteolytic digestion completely abolished the anti-syncytial activity of the active peptide preparation. Furthermore, a core peptide [S-benzylCD4(83-89)] retaining significant biological activity was defined. Syntheses of CD4(84-94) or CD4(84-89) yielded material with no anti-syncytial activity, while addition of N-terminal threonine 83 to either sequence restored anti-syncytial activity. Non-specific effects of threonine addition were considered unlikely since (1) a threonine-rich control peptide synthesized under identical conditions was completely devoid of bio logical activity, and (2) the threonine-containing nineteen-residue peptide DQKEEELKIEDSDTYICEV of identical composition to the CD4(76-94) peptide was also without detectable anti-syncytial activity. These results indicate that anti-syncytial activity could be generated by two independent routes, both requiring the existence of a parent peptide. Thus biologically active material could be recovered either from the peptide mixture after solid-phase synthesis of the CD4(76-94) peptide, by xylyl- or benzyl-derivatization of inactive authentic CD4(76-94), or by xylyl derivatization of inactive authentic S-benzylCD4(83- 94). The S-benzylCD4(83-94) material partially purified by HPLC was stable to heating at 65°C and the biological activity was destroyed by digestion with Pronase.
As indicated herein supra the anti-viral activity of these CD4 peptide preparations is specific and restricted to CD4-dependent virally induced cell fusion. CD4(76-94) at concentrations up to 500 M had no effect on HTLV-I-induced cell fusion in vitro. Likewise, activity appears to be restricted to inhibition of CD4 function related to viral interaction, since complete inhibition of HIV-induced cell fusion could be observed at a dose of the CD4(76-94) peptide which did not affect the MLR response (vide supra). Without being bound to any theory, it is postulated that the mechanism of action of these CD4-derived peptides may involve competitive blockade of viral attachment to CD4 via peptide binding to the CD4-combining region of the HIV gpl20 glycoprotein. Consistent with this proposed mechanism of action, the partially purified S-benzyl-CD4(83-94) peptide blocked fusion between HIV-infected T cells and CD4-expressing T-cell lines or CD4-expressing peripheral blood-derived cells, independent of the isolate of HIV used in the assay and also blocked the CD4-dependent fusion induced by the structurally variat simian immunodeficiency virus. In summary, several 12-25 amino acid residue containing fragments of the T4 molecule, the receptor for the human immunodeficiency virus, were tested for their ability to inhibit fusion of HTLV-III-infected and non-infected CD4+ human lymphoma cells, to inhibit CD4 antibody binding to CD4+ cells by various isolates of HIV, and for their ability to block the CD4+ CEM cells by various isolates of HIV, and for their ability to block the CD4-dependent mixed lymphocyte reaction in human peripheral blood leucocytes. It is noted that none of the fragments tested were active as pure peptides, but an unfractionated preparation of one of the syntheses, that of the peptide corresponding to residues 76-94 of the T4 antigen (Post G-10 H) inhibited fusion and infection at concentrations between 125 and 500 μM . This effect was reproducible across several separate syntheses of the peptide tested in three different laboratories. An S- benzyl and an S-methylbenzyl derivative of this peptide was produced by two separate laboratories using similar but distinct published protocols for adding the benzyl moiety to a sulfhydryl group in the polypeptide without derivatization of other weaker nucleophilic attaching groups found in the peptide. Each of these preparations was active in inhibiting giant cell formation between infected and non-infected CD4+ cells in vitro. An active peptide could also be produced by modifying the synthesis of the authentic peptide such that a benzyl instead of a methylbenzyl protecting group was incorporated into the growing chain of cystein, affording a peptide with cystein derivative more stable to HF cleavage than the original compound. This material was also efficacious in inhibiting fusion. In addition, chloroform extraction of an aqueous solution of the original synthesis of peptide H afforded at the interface of the organic/aqueous layers material which was potent and completely efficacious at 30 M to inhibit CD4+-dependent fusion between HTLV-IIIB infected and non-infected human lymphoma cells. This represented about 3-fold increase in the specific activity of the derivatized peptide H material.
It was further found that a shorter, benzylated version [CD4(83-94)BZL] was a potent inhibitor of HIV- induced cell fusion. This material was prepared and partially purified by collection of a single UV-absorbing peak after fractionation using reverse-phase (C8) chromatography. CD4(83-94)BZL was tested for its ability to inhibit infection of CEM-SS cells by HTLV-IIIB (Fig. 1). When CD4(83-94)BZL was present only during the sixty minute period of viral inoculation, the IC50 (the dose required to achieve a 50% reduction in the number of syncytia formed in peptide-treated versus virus-infected, non-treated controls) for this peptide preparation was approximately 63 μM (Fig. 1A). Inhibition of infection rather than inhibition of cell fusion following infection appears to be the mechanism of action of CD4(83-94)BZL as well as the CD4(76-94) peptide mixture, since decreased numbers of syncytia were observed five to six days after viral inoculation, despite the fact that peptide was present only during the initial one-hour viral absorption step of the assay. When the peptide was present during the one-hour inoculation period, and thereafter in the culture medium until syncytia were scored five days later, an eight-fold increase in CD4(83-94)BZL anti-viral potency resulted [a shift in the IC50 from 63 to 8 μM (Fig. 1A)]. This experiment also demonstrated that the peptide derivative at concentrations up to 125 μM had no apparent toxic effects on CEM-SS cells even during five days' exposure in vitro (Fig. 1C).
The findings presented herein now provide a "process principle" for obtaining an antiviral agent. The principle is that the viral receptor is fractionated into various smaller entities. These entities are then separated and purified. The purified entities, if inactive as antiviral agent, are then derivatized as described in detail herein and thus biologically active antiviral peptide derivatives are obtained. In the present instance, a 19mer pure peptide was reduced to a 12mer pure peptide which was then converted to a S-benzyl 12mer. An inactive peak 4 was then converted by solution derivatization to an active peptide peak 7 which was active as an antiviral agent at the nominal concentration of 32 μM . Thus a synthetic, isolated, substantially pure, biologically active product is obtained by the process of the present invention. In accordance with the principle enunciated herein, the following are noted. It was found that peptide G (25mer comprising CD4 (51-75)) blocks antibodies directed against CD4 molecule. A 19mer molecule (such as 71-89, 72-90, 73-91, 74-92, 75-93, 76-94) could partially inhibit HIV infection; 12mer (83-94) shows antiviral property and 7mer (83-89) is the core peptide; an extension of N-terminus of CD4 providing improvement in biological activity to inhibit infection.
It should be noted that no strain of HIV or SIV has been identified which does not employ the CD4 molecule to gain entry into T-lymphocytes. To further determine that the benzylated CD4 derivatives acted as competitive blockers of the CD4 binding site of retroviruses, the efficacy of the peptides to inhibit infection of CEM-SS cells by other structurally variant HIVisolates was also tested. CD4(83-94)BZL inhibited infection of CEM-SS cells by HIVcc, HIVmn and HIVRFII, as well as HTLV-IIIB. Inhibition was virtually complete at concentrations less than 125 μ M (Table IV). CD4(83-94)BZL also effectively inhibited HIV-induced cell fusion regardless of the isolate of HIV-1 used in the assay. Inhibition of fusion by CD4(83-94)BZL occurred whether fusion was induced using a CD4-positive lymphoid indicator cell line, or antigen-activated freshly isolated human peripheral blood leucocytes.
CD4(83-94)BZL is a potent and efficacious inhibitor of cell fusion induced by simian immunodefi ciency virus as well (Table IIIA). The amino acid sequence of the large envelope glycoprotein of SIV is quite different from that of HIV-1, and both envelope proteins are significantly structurally different from that of HIV-2. The ability of CD4(76-94)BZL to inhibit infection by HIV-2 was also tested and the peptide was found to inhibit infection of CEM-SS cells by both viruses with similar potency (Table V).
All of these data provide strong, direct and indirect evidence that the anti-viral activity of the original synthetic preparation of peptide H resides in a side fraction (most likely an S-derivatized side fraction), which is completely efficacious at nominal concentration of 30 μM, as an HIV-specific antiviral agent without activity to disrupt endogenous CD4-dependent immune functions in vitro. "On-line" S-benzyl-containing syntheses of peptide H lacking one or more residues at the C- or N-terminus of the molecule have been constructed, and serve to demonstrate that the N-terminal seven residues of the peptide, and at least one of the C- terminal glutamic acid residues, are not essential for anti-viral activity. On the other hand, this core undecapeptide is responsible for anti-viral activity in a sequence dependent way, since removal of the eighth N-terminal residue, removal of the C-terminal hexapeptide, or removal of the C-terminal hexapeptide and replacement in a different order at the N-terminus of the molecule, result in peptides totally without anti-viral activity.
Since HIV is known to have a high degree of variability in its structure, a multivalent group-specific vaccine will be required if the vaccination is chosen as the method of combating HIV infection. The present invention avoids this problem because the conservation of the receptor for the virus is exploited. For, although the virions may be slightly different, they still share the property of binding to the CD4 molecule and thus share the property of inhibition by the binding epitope of the CD4 molecule. Data with two other isolates of HIV, besides HTLVIIIB, which differ significantly in their sequence in the envelope region, indicate that infection of CD4-positive cells by all three isolates is inhibited by peptide H, but to different degrees, reflecting different affinities of each virion for the CD4 molecule (Table III).
Because of their anti-receptor property, the polypeptide derivatives of the present invention could function as a short-acting immunosuppressant and be useful in transplantation and grafting.
The results presented herein also indicate that hybrid molecule of two separate epitopes could also be combined for example with a disulfide bond or a flexible polymethylene linker to give a more potent inhibitor if more than one receptor epitope is found to be involved in ligand binding such as peptides H and E. Accordingly, peptides E and H are joined to make a peptide E/H heterodimer by disulfide bond formation between the two purified peptides. Without being bound to any theory, it is postulated that since peptides E and H are both active, and are joined by a disulfide bond in the native molecule (CD4), it is reasonable that the peptide E and H mixtures may become active because they contain derivatives of the respective authentic peptides which are conformationally restricted by derivatization, and therefore have a higher affinity for the HIV envelope glycoprotein than their underivatized, conformationally flexible parent peptides. In this case, the conformation of both peptides would most closely approximate their conformation in the native molecule, and be relatively restricted to this conformation by disulfide bond formation [B.J. Classon, J. Tsagaratos, I.F.C McKenzie, I.D. Walker, Proc. Natl. Acad. Sci. USA 83, 4499 (1986)]. Thus a peptide E/H heterodimer is produced by disulfide bond formation between the two purified peptides, CD4(l-25) and CD4(76-94). Accordingly, these peptides are synthesized by solid-phase methodology as described herein and the desired peptides QGNKWLGKKGDTVELTCTASQKKS and LKIEDSDTYICEVEDQKEE combined in water and allowed to stand overnight at room temperature with slow oxygen bubbling, to effect dimerization. Dimers are purified by high pressure molecular sieving chromatography and tested for biological activity.
The biological activity of peptides E and H (peptide mixtures) to inhibit infection of CD4-positive cells, and HIV-induced fusion of CD4-positive cells, was then compared. Peptide H and peptide E [YCD4(1-25)] were tested for their ability to inhibit HIV-induced cell fusion or infection of CEM-SS cells by HIV (HXB-2 isolate) by the tests described herein. The results are as follows:
Figure imgf000040_0001
The above results are expressed as concentration required to completely inhibit HIV-induced cell fusion after a 24 hour co-cultivation experiment (fusion) and the concentration required to reduce the number of infectious centers (syncytia) present after six days of culture, following viral inoculation of the cultures in the presence of the peptide for one hour and incubation in peptide-free culture medium thereafter, by more than 50%.
Further data show that antireceptors in the
CD4 (76-94) region can be structurally refined to distinguish not only between ligands of the CD4 receptor (e.g. antigen in the presence of class II molecules vs. HIV envelope glycoprotein) but also between structural aspects of the same ligand when presented in different biological contexts (here, HIV envelope glycoprotein in intact infectious viral particles versus HIV envelope glycoprotein in cell membrane during cell-cell fusion). These data are presented below.
Figure imgf000041_0001
The above data show that the syncytia-forming quantitative microassay can be used to distinguish effects of the peptides on infection alone (the 19mers are much more active than the 12mer after 1 hour exposure to peptide) compared to effects on HIV-induced cell fusion in which the 12 and 19 mers are about equal.
Of course, the finding that a fragment of a peptide or protein receptor can inhibit, with great efficacy albeit relatively low potency, the binding of the ligand to its receptor, opens a new vista in the design and synthesis of therapeutic agents. When peptide fragments of a receptor are found to inhibit ligand- receptor interaction at a low affinity, the possibility exists of derivatizing these fragments to increase their affinity for ligand by restricting their conformational flexibility, or increasing their non-specific binding to the ligand by altering hydrophobicity or adding covalent modifying agents and the like. Such derivatization of the core active peptide includes substitution, addition of various substituents on the cysteine sulfur, methylation of glutamic acid, addition of alkylating agents, addition of hydrophobic side groups and the like in order to increase the potency and duration of action of the compound. Without being bound to any specific theory, it is proposed that in the ligand-receptor interaction the ligand binds to a small number (> 1) of continuous oligo peptide sequences in the receptor. The free energy of this reaction is comprised of both the entropy and enthalpy of binding, the former does not prohibit binding because of the restriction of conformer flexibility of the binding epitopes by the non-binding portions of the receptor molecule and within the epitope itself. It is further postulated that restriction of conformer flexibility contributes to the free energy of binding, and therefore to the affinity of binding of ligand to receptor, largely by decreasing delta S. Therefore, fragments (or even a fragment) of the receptor involved in binding is identifiable by synthesis from the receptor sequence and subsequent assay for inhibition of ligand-receptor interaction. The potency to inhibit should be many orders of magnitude less than the ligandreceptor Kd since there is no restriction on conformer flexibility by the rest of the molecule. To accomplish this, synthesis is done on 430A with subsequent controlled HF cleavage to give a mixture of authentic and protected groups to take advantage of conformer flexibility restriction within the peptide sequence. Derivatives of 25 mers based on S-S, hydrophilicity and the like are thus prepared and the crude mixtures are tested for their anti-receptor activity. Then active preparations are purified to homogeneity by standard methods. Then, purification of the specific inhibiting molecule to homogeneity (after test of crude mixture) is accomplished by standard purification techniques.
A pharmaceutical anti-viral composition in accordance with the present invention comprises an effective amount of the anti-receptor compound of the present invention to inhibit viral infection, and pharmaceutically acceptable, non-toxic sterile, carrier.
The present invention also provides a method of inhibiting viral infection comprising administering to a host susceptible of viral infection an effective (antiviral) amount of the active ingredient (anti-receptor molecule including derivatives of analogs thereof) to inhibit viral infection.
It has been suggested that a mirror-image molecule of a receptor, made on the principles of molecular complementarity, may also inhibit ligand-receptor interaction. However, the amino acid sequence of the peptide "H" of the present invention demonstrates that this theory is not workable in this case.
It is understood that the examples and embodiments described herein are for illustrative purposes only and that various modifications or changes in light thereof will be suggested to persons skilled in the art and are to be included within the spirit and purview of this application and scope of the appended claims.
Table IV
Inhibition of HIV-2 infection of CEM-SS cells by CD4(76-94) post-resin peptide mixture.
Figure imgf000044_0001
Virus inoculation of CEM-SS monolayers was carried out in the test. Viral inocula (HIV-1HTLV-IIIB or HIV-2NIH-z) were preincubated in the presence or absence of the nominal concentrations shown of the post-resin peptide mixture from the automated solid-phase synthesis of the desired peptide LKIEDSDTYICEVEDQKEE. Peptide, when present, was added during viral inoculation and also during subsequent growth to confluence of the CEM-SS cell monolayer.
Table V Relative anti-viral efficacy of CD4(83-94)BZL after infection of CEM-SS cells with multiple isolates of HIV-1
Figure imgf000045_0001
VViirraall sstocks of HIV-1HTLV_IIIB, HIV-1RF-I I, HIV-1 MN and
HIV-1cc were prepared as either fresh or frozen cell culture supernatants from HIV infected cells. Viral inocula were pre-treated with varying nominal concentrations of peptide in PBS or complete medium were incubated with DEAE-dextran pre-treated CEM-SS cells for one hour at 37°C Inocula were removed from the cultures by aspiration and replaced with fresh medium or medium containing the nominal concentrations of CD4(83-94)BZL shown. CD4(83-94)BZL was prepared as described in detail in the legend to Figure 1A, and represents an HPLC- purified biologically active fraction (peak 7) from the automated solid-phase synthesis of the desired peptide TYICbzlEVEDQKEE. Results are the averages of duplicate determinations (all within 30% of the mean values) in a single experiment repeated at least once with similar results.
Table VI
Potency of CD4(83-94)BZL to inhibit fusion induced by several isolates of HIV and by SIV
Figure imgf000046_0001
CD4( 83-94)BZL prepared as described in the legend to Figure 1 was pre-incubated with 50,000 H9 cells infected with the viral isolates HlV-1TJ, HIV-1DV, HIV-1HTLV-IIIB (HXB2) or SIVUC for one hour at 37°C Levels of viral expression in each cell line were sufficient to allow formation of syncytia upon co-culture with 50,000 VB cells in a volume of 50 ul RPMI 1640 supplemented with heat-inactivated 10% fetal calf serum at a rate and frequency similar to that previously reported for the reference isolate HXB2 scored at four, six and twenty-four hours after co-culture: -, no visible syncytia or presyncytial aggregates observed in duplicate wells, 1-4, graded increase in syncytia to the maximum seen in the absence of treatment with peptide or anti-Leu 3A CD4 antibody. Syncytial scores shown are for the end of a twenty-four hour observation period.
Table VII
Comparison of CD4(83-94)BZL potency to inhibit
HIV induced cell fusion of VB indicator compared to acutely activated, fresh human peripheral blood mononuclear cells
Figure imgf000047_0001
The post-resin peptide mixture obtained from the synthesis of the desired peptide TYICbzl EVEDQKEE was preincubated for 30 minutes at 37°C at the nominal concentrations shown. Cells and peptide were combined with either VB cells or phytohemagglutinin (PHA)-stimulated PBMCs and cultured at 37°C for 24 hours, at which time syncytia were scored.
APPENDIX "A"
Synthesis of peptide H:
The peptide mixture was synthesized on an Applied Biosystems, Inc. 430A Automated Peptide Synthesizer. The synthesizer was programmed to couple to a PAM-glutamic acid resin (0.5 mmol glutamic acid equivalents) the amino acids E,K,Q,D,E,V,E,C,I,Y,T,D,S,D,E,I,K, and L as the tBoc, R-blocked derivatives shown in the dynamic run file attached. Double-coupling cycles were run for S,D,E,I, K and L (the last six. amino acids of the synthesis). Activation, coupling, washing, deprotection, washing cycles were as described in the.430A User Manual. The resultant resin-coupled peptide mixture from the complete run (approximately 1.5 gm) was air-dried, and placed in the HF cleavage apparatus. 1 ml anisole and 1 ml dimethylsufide, and approximately 100 μg of p-thiocresol were added, and the mixture placed under vacuum. 18 ml of HF were added under vacuum, and the mixture stirred for one hour at 0° C Volatile materials were removed under vacuum over a one-hour period. The resin-peptide mixture was suspended in approximately 30 ml of ethyl ether, and allowed to stir at room temperature for 30 min. The slurry was vacuum-filtered, and suspended in approximately 250 ml of 100mM ammonium bicarbonate pH 6.5. This suspension was vacuum-filtered to remove resin, and lyophilized overnight. This material constitutes post-resin peptide H, or peptide H mixture, comprising 1) the desired peptide sequence LKIEDSDTYICEVEDQKEE, 2) derivatives of this sequence including R-protecting groups not removed during HF cleavage, R-protecting groups or scavengers obtained upon re-adduction during cleavage, 3) deletion peptides generated by premature chain termination during synthesis, 4) re-arrangements of R-groups (e.g. glutamine dearaidation, pyroglutamyl ring formation, beta-elimination, etc.) and peptide backbone (e.g., isopeptide formation) and 5) peptide products resulting from combinations of the above as well as other uncharacterized intra-molecular and inter-molecular reactions and rearrangements occuring during synthesis, cleavage, or purification.
Synthesis of peptide T4DTEbzl:
Synthesis was as described above, except the sequence TYIC(benzyl)EVEDQKEE was the desired peptide, and the corresponding input protected amino acids were the same except for substitution of N-tBoc-S-methylbenzylcysteine by N-tBoc-S-benzylcysteine, and omission of p-thiocresol during the cleavage reaction.
Figure imgf000050_0001
Figure imgf000051_0001
Figure imgf000060_0001
Figure imgf000061_0001
NEW ANTI-RECEPTOR PEPTIDES AND THERAPEUTIC AGENTS
This is a continuation in part of the application Serial Number P7/182,109 filed April 15, 1988 which is a continuation in part of the application Serial Number 07/107,994 filed October 14, 1987. Technical Field:
The present invention is related generally to synthesis of peptide based antireceptors. Antireceptors are fragments of receptor proteins, or derivative of such fragments, which include the ligand-binding region of the receptor protein, and which therefore act to block the interaction of ligands and their receptors by binding to the ligand and preventing its attachment to the native receptor molecule. More specifically, the present invention is related to fabrication by automated solid-phase peptide synthesis, and acid cleavage of the peptide from the solid-phase resin under controlled conditions, to produce a peptide mixture comprising authentic desired peptide, and deleted and/or derivatized (partially daprotected) congeners of these peptides which may, due to steric constraints or increased non-specific binding, have a higher affinity for the receptor ligand than the unmodified peptide sequence itself. Thus, the process of fabricating antireceptors comprises synthesis of a series of peptides spanning the entire theoretical binding area of a given protein receptor molecule, and testing post-resin peptide mixtures to identify and select, by further purification, peptide derivatives which can function as antireceptors. Background of the Invention:
A number of ligands including viruses, interact with cells via receptors. The formation of the ligand-receptor dyad is believed to be the first step in the initiation of biological response, such as viral infection, signal transduction, cell proliferation, cell fusion and the like. The present invention takes advantage of the proposition that synthetically designed molecules or agents which possess high affinity for binding to ligands, specifically at their receptor-binding epitopes, would block the interaction of the ligand to the receptor, thereby inhibiting the initiation of biological responses caused by the ligand. it should be noted that this approach is quite distinct from the antigen-antibody mechanism where an antigenic ligand induces the production of antibodies in an immune-responsive system and then these antibodies bind to the epitopic sate of the antigen to block the biologic response of the antigen. In contrast, the present invention is not dependent on the nature of the antigen at all. Rather, in accordance with the present invention, it is the receptor molecule which is analyzed and based on such analysis anti-receptor molecules are synthesized which clock the receptor-ligand interaction.
It has previously been reported that synthetic peptides, which are derivatives of ligands, function more potently anchor efficaciously than their parent peptides as either egonists E.
Rivier, J. Polrter, C.L. Rivier, M. Perrin, A. Corrigan, W.A.
Hook, R.P. Saraganian and W.W. Vale, J. Med. Chem. 23, 1846 (1986) or antagonists (C.D. Richardson, A. Scheid, and P.W. Choppin, Virology 105, 205 (1980) of ligand-receptor interactions. It was, therefore, appropriate to determine if derivatives of receptors might function more potently and/or efficaciously than their parent peptides in inhibiting ligand- receptor interactions
SUMMARY OF THE INVENTION
It is, therefore, an object of the present invention to synthesize modified or unmodified receptor fragments, or mixture thereof, which specifically block the interaction of the receptor with its ligand or ligands, that is to act as antireceptors,
It is a further object of ths present invention mat in cases where there are multiple ligands for a single receptor, which ligands may interact with different specific regions of the receptor, that such antireceptors would inhibit selectively the interaction of one, or one class, of ligands for the receptor, without affecting the interaction between the receptor and other (or other classes) of ligands.
It is an additional object of the present invention to synthesize antiviral agents including modified or unmodified region(s) of a receptor which specifically block the receptor-ligand interaction without affecting other functions of said receptor, for example immunosuppression without antiviral effect and antiviral effect without immunosuppression.
It is a still further object of the present invention to provide a method for rational drug designing which spares the normal receptor function, but inhibits the binding of a ligand to the receptor. The drug design includes sparing class II cytotoxicity or deleting class II ß-activation.
It is another object of the present invention to identify the anti-receptor structure and modify the same to increase its binding affinity by such methodology as addition, deletion, derivatization and tha like.
It is yet another object of the present invention to provide unique anti-viral agents inhibiting viral infectivity, particularly of human immunodeficiency virus, HIV-1 , HIV-II, SIV and the like.
It is yet another object of the present invention to provide isolated, substantially pure, anti-receptor polypeptides or derivatives thereof, useful as therapeutic agents for those anomalous conditions which result from ligand-receptor interaction.
Other objects and advantages will become evident from the following detailed description of the invention. BRIEF DESCRIPTION OF THE DRAWINGS These any other objects, features and many of the attendant advantages of the invention will be better understood upon a reading of the following detailed description when considered in connection with the accompanying drawings wherein:
Fig. 1 shows the appearance of CEM-SS ceils following inoculation with HTLV-IIIB, in the presence or absence of continuous treatment with peptide CD4(83-94)BZL.
Photomicrograph (25X) of individual microtiter wells from a typical CEM-SS assay demonstrating HTLV-IIIB induced syncytium in the presence and absence of CD4(83-94)BZL. A microtiter well containing virus-induced syncytia after one hour inoculation with HTLV-IIIB in the absence of peptide followed by removar or virus and cell culture for five days. Vo = 150). 3. Virus surviving fraction Vn = 10, at a final peptide-concentration of 15 μM. C. Virus surviving fraction, Vn = 0, at a final peptide concentration of 125 μM. The peptide preparation CD4(83-94)BZL was incubated with the virus inoculum for 60 minutes after wnich the peptide-virus reaction mixture was incubated with the adherent CEM-SS cells for an additional hour. Virus-pentide- containing medium was removed and replaced with fresh complete medium containing CD4(83-94)BZL at the same concentration. The number of syncytia listed above are counts taken from the entire microtiter well.
Fig, 2 represents chromatographic fractionation of synthetic CD4(76-94), including bioactivity, and UV-absorbing species characterized by FAB-Mass spectrometry.
A typical chromatogram of 1.8 mg of CD4(76-94) on a Vydao or (10 × 250 mm) bonded-phase semi-preparative column is shown. Material was post-resin CD4(76-94) dissolved in 10 mM ammonium acetate at pH 7.0. Mobile phase was (A) ammonium acetate buffer and (B) 20% ammonium acetate buffer/80% acetonitrile. The percentage of B in the mobile phase was varied as shown (dashed line). Material eluting at retention times 2-3, 3-4.5, 4.5-5 and 5-8.5 minutes was pooled from several semi-preparative runs, lyophilized, weighted and submitted to bioassay at nominal concentrations of 500 to 30 μM, in the fusion assay. Bioactivity (hatched bar) is expressed as doses of anti-syncytial activity per fraction. One dose is the smallest amount of material necessary to completely inhibit fusion between 50, 000 HTLVIIIB/H9 cells and 50,000 VB indicator cells over a twenty-four hour period under standard assay conditions. Aliquots of the major peak (3 to 4.5 minutes retention time) and the area of the chromatogram in which bioactive material eluted (5-8.6 minutes retention time) were submitted to fast atom bombardment-mass spectrometric analysis as described. The major peak (3-4.5 min retention time) gave a parent fragment mass (M+H = 2287) consistent with the mass of the desired peptide LKIEDSDTYICEVEDQKEE as well as a fragment of mass 2269, the mass of the parent fragment minus H2O (18 atomio mass units). The biologically active material eluting at 5-8.5 min retention time exhibited a complex mass spectrum containing the parent M+H (2287) and multiple higher-molecular weight peaks consistent with extensive derivatization of the parent peptide (data not shown).
Fig. 3 represents chromatographic fractionation of S-benzylCD4(83-94).
Post-resin material from the synthesis of S-benzyl-CD4 (83-94) was employed. The desired peptide was TYICbzlEVEDOKEE where Cbzl indicates benzylation of cysteine 86 by insertion of 5-Boc-S-benzyl cysteine in place of 5-Boc-S-p-methylbenzyl cysteine in the solid-phase automated synthesis sequence yielding a peptide derivatized at cysteine with a benzyl moiety following HF cleavage of the peptide from the solid-phase resin. 10 mg of the post-resin peptide mixture was applied to the semi- preparative column under the conditions described in Fig. 2. Aliquots were taken for both FAB mass spectrometric analysis and bioassay (anti-syncytial activity). Data shown are the absorbance profile at 225 nm (broken line), the anti-fusion activity in each fraction (hatched boxes; dose defined as in Fig. 2), and the mass spectra of the major peak (four) and the bioactive peak (seven) resolved by reverse-phase chromatography. The concentration of the seventh peak material required to completely inhibit syncytia formation in the standard fusion assay was 32 μM. This concentration was calculated from the weighed mass of the material collected from this region of the chromatograph, and the molecular weight of the desired peptide.
Fig. 4 shows the effects of CD4(1-25) on infection or CEM-SS cells in vitro by various HIV isolates. Numbers in parenthesis are the number of syncytia per well in untreated wells. DETAILED DESCRIPTION OF THE INVENTION
The above and various other objects and advantages of the present invention are achieved by isolated, substantially pure anti-viral agents comprising anti-receptor polypeptides or derivatives thereof which inhibit viral infection and supsequent cell fusion and syncytia formation.
Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs.
Although any methods and materials similar or equivalent to these described herein can be used in the practice or testing of the present invention, the preferred methods and materials are now described. All publications mentioned hereunder are incorporated herein by reference.
The term "ligand" and "receptor" as used herein indicate two members of a binding dyad wherein the "ligand" is the component whose binding to the receptor is inhibitatale by addition of the antireceptor peptide because the antireceptor peptide binds to the ligand, replacing receptor in the ligand-receptor dyad, and the "receptor" is that region of a molecule (before and after derivatization) which defines an epitope responsible for oinding of the ligand and based on which the antireceptors are tailored, Thus a single macro molecule may have several epitopio sites, hence have several receptor subtype binding domains within the same molecular configuration for binding of several different ligands.
The term "anti-viral agent" as used herein means an agent which is at least in part a polypeptide or a derivative thereof (including conjugate, analog and the like) which inhibits either viral infection or viral induced cell fusion .
The term "substantially pure" as used herein means the product is as pure and homogeneous as can be obtained by employing standard techniques well known to one of ordinary skill in the art.
CD4 (Leu3A/T4) molecule is present on the surface of a subset of human T-lymphocytes which help cytotoxic- and B-lymphocytes during class II-restricted immune response to foreign antigen. The CD4 molecule is also the receptor by which the human immunodeficiency virus (HIV) binds to T-lymphocytes and infects these cells. Since the cloning and sequence of CD4 have been accomplished, this receptor was selected to illustrate the principles and the application of tne present invention. Accordingly, several polypeptide. fragments containing 7-25 amino acid sequences of the CD4 receptor extracellular domain were synthesized and tested for their ability to inhibit three CD4-mediated functions: (1) Fusion of HIV-infected and non-infected CD4-positive T-Iymphoma cells: (2) Infection of CD4-positive lymphoma cells with HIV; and (2) Proliferation of T-helper- inducer cells in the presence of allogeneic irradiated stimulator cells (the mixed lymphocyte reaction). In addition, the ability of the peptide fragments to inhibit binding of a CD4 antibody, which neutralises all three of these processes, to the CD4 molecule on the surface of peripheral blood leucocytes, has also been determined in order to map the binding epitope of this antibody.
For convenience, the synthetic peptides and peptide derivatives corresponding to regions of the deduced amino acid sequence of human CD4 have been assigned residue numbers cased on the amino acid residue numbers of CD4 (Madder, et al. Cell 42, 93 (1985)]. Peptides and peptide derivatives in the region or CD4 spanning amino acid residues 76 to 94 are referred to herein as follows: CD4(76-94) refers to the desired 19 residue peptide LKIEDSDTYICEVEDQKEE. CD4(83-94) refers to the desired 12 residue peptide TYICEVEDQKEE. S-benzylCD4(76-94) and S-benzylCD4(83-94) refer to the desired 19 residue peptide LKIEDSDTYICbzlEVEDQKEE, and its 12-residue congener, in which cysteine protection via benzyl, rather than methylbenzyl, derivatization during solid-phase synthesis yields a final peptide product in which the cysteine residue remains protected (S-benzyiated) after HF cleavage.
Material possessing ability to inhibit HlV-induced cell fusion generated from 1) authentic CD4(83-94), authentic S-benzylCD4(83-94) or their 19-residue congeners, by liquid-phase benzyl or methylbenzyl alkylation, or 2) purified by HPLC of post-resin material from synthesis of S-benzylCD4(84-94) are designated CD4(83-94)BZL or CD4(76-94)BZL. Unfractionated mixtures of the peptide material resulting from the solid-phase synthesis of the desired peptides are referred to as the "post-resin peptide mixture"; for example CD4(76-94) post-resin peptide mixture, or CD4(76-94) peptide mixture.
Seven different polypeptide fragments, each containing 25-amino acid residues of the CD4 molecule, were first examined. None of these fragments, as the pure autnertio peptide, inhibits HIV infection, cell fusion or the mixed lymphocyte reaction. However, one of the fragments, corresponding to amino acid residues 51-75 of the CD4, inhibited meutralizing antibody binding to CD4 on intact cells. A derivative of another fragment, corresponding to amino acid residues 76-94, inhibited HTLVIIIB infection of CEM cells, and fusion of HTLV-IIIB-infected and non-infected CD4-positive lymphoma cells. with an IC50 of 60 μM, with no effect on the proliferation of T-helper cells in the mixed lymphocyte reaction. Several other polypeptide fragments and various derivatives thereof were also prepared and tested. The methodology and the results obtained are now described.
MATERIALS AND METHODS Unless mentioned otherwise, all chemicals and reagents were of analytical grade and obtained from commercial sources.
The compounds of the present invention are characterized by having a sequence comparable to a sequence of the CD4 molecule, in particular a sequence distal to the N-terminus. The sequence includes the cysteine at position 85 of CD4 at which the sulfur on the cysteine is blocked.
In general, the compound is prepared by reacting underivatized peptide under mild conditions with reagents known to react with mercaptans. These reagents may be active halides, pseudohalides, active olefins, e.g., x,p-enoneo, such as maleimide, disulfides. or the like. For in vivo use, the derivatizing groups should provide a physiologically acceptable product.
The blocking groups will have from about 1 to about 36 carbon atoms and may be aliphatic, alicyclic, aromatic, heterocyclic or combinations thereof. Usually, the blocking group will have from 0 to 10 hetero-atoms, which may be in the longest chain, as a substituent on a chain or ring atom or the like. For the most part the heteroatoms will be selected from halogen, nitrogen, oxygen or sulfur. Binding of the substituent to the sulfur of the cysteine residue may be via a carbon, or heteroatoms such as nitrogen, or sulfur atom. The bulk of the group immediately distal to the cysteine sulfur and attached directly to the sulfur is preferably less than that of a naphthyl group and greater than that of a linear lower alkanoic acid, most preferably approximately the size of a phenyl group or similar cyclic or heterocyclic group (either aromatic or non-aromatic). The group optionally may be furtner substituted.
Various groups may be used to block the sulfur, for example, an aryl-containing substituent or a thioether resulting from the reaction between the thio group of the cysteine and a maleimide. The aryl group is preferably selected from 5- and 6-membered aromatic rings containing carbon and 0-1 oxygen or sulfur and 0-3 nitrogen atoms in the ring. Phenyl is a preferred aryl group, e.g., benzyl and naphthyl. The aryl-containing group may be substituted or unsubstituted. Substituents may include alkyl, particularly methyl, halogen, particularly chloro, nitro, etc., where the substituents may be in any position, preferably at the ortho position. The aryl group may have from 0 to 3 substituents, usually not more than 2 substituents, which substituents may be the same or different.
For active olefins used as blocking groups, the olefin will usually be conjugated with a second site of unsaturation, e.g., a carbonyl group. Acyclic groups, maleimido groups, conjugated polyolefins, or the like may find use.
For disulfide formation, precursor disulfides will be employed which have a convenient leaving group, which is displaced by the cysteine to form a new disulfide bond. When using reagents known to react with mercaptans, intramolecular disulfides formed from another cysteine of a contiguous CD4 peptide chain are excluded.
It is also desirable to have a functionality present on the blocking group which allows for linking to another molecule, e.g., carboxy, carboxy ester, or the like. The carboxy may then be activated with a carbodiimide, carboxy diimidazole, or the like for reaction with an amine or alcohol, for example, a protein.
Examples of reaction compounds for preparing derivatives of the CD4 molecule and fragments thereof include the following. wherein the group bound to the sulfur of cysteine 86 may be one of the following groups.
(a) alkyl and substituted alkyl compounds: X-CH2 (CH2)n w h e r e n = 0-20 and X is selected from H; OH;OCH3;SH;SCH3;NH2 ; NHCH3 ;N(CH3)2 ; SO3H;SO2CH3 ; or halogen, being hetero only when n is other than 0.
(5) cycloalkyl and substituted cycloalkyl compounds:
where n - 1-10 and a hyd
Figure imgf000073_0002
rogen on any of the ring carbons is replaced by X as described in (a) above.
(c) aromatic or substituted aromatic compounds:
Figure imgf000073_0001
where n " 1 -5 and X is as described in (a) above.
(d) polyaromatic or substituted aromatic compounds::
Figure imgf000074_0001
where n - 1 -3 and X is as described in (a) above.
(e) heterocyclic or substituted heterocyclic compounds such as (i) substituted pyridyl, (ii) imidazola or (iii) quinoline:
Figure imgf000074_0002
where n - 0-3 and R is a pair of electrons; H; alkyl of1-2 carbon atoms; or 0.
Figure imgf000074_0003
where n = 0-3 and R is selected from C6H5; CH3 ; or H.
Figure imgf000074_0004
where R is a pair of electrons; H; or O.
(f) maleimide adducts such as m-maleimidobenzoylN-hydroxysuccinimide ester; m-maleiraido-benzoylaulfosuccinimide ester; N-succinimldyl4-(p-maleimidophenyl)-butyrate; N-succinimidyl4-(N-maleimidomethyl)cyclohexane-1-carboxylate; or sulfosuccinimidyl- 4-(N-maleinidomethyl) cyclohexane-1-carboxylate; bis- maleimidohexane; bismaleimidomethyl ether; or N-Υ-maleimidobutyryloxysuccinimide. (g) thio-containing compounds such as:
Figure imgf000075_0001
where X is N3; OH; OR; NH2 ; NHR; NO2 ; SH; SR; halogen; CO2H; or aryl of from 5 to 12 carbon atoms; and
R-S- where R is alkyl or substituted alkyl.
(h) amino acids or cligopeptides.
(i) cytotoxic agents such as alkylating agents, for example pipobroman; thio-TEPA; chlorambucil; cyclophosphamide; nitrogen mustard; mephalan; or uracil mustard.
(j) membrane-perturbating agents, for example adriamycin; ionophores, such as valinomycin; or surface active agents, such as detergents.
(k) anti-retroviral agents such as 5-azidothymidine (AZT); dideoxycytidine (DOC); dideoxyadenosine (DDA); or dideoxyinosine (DDI).
In some instances, particular derivatives may be cytotoxic. in which case these derivatives may be modified to reduce cytotoxicity or substantially eliminate toxicity at pharmacologically active dosage levels.
A preferred peptide in accordance with the present invention comprises substantially the same sequence as CD4 ammo acids of the sequence 85 to 92, usually 83 to 94, and more particularly 81 to 94, conveniently 76 to 34 where the sequence may ba further extended by as many as 10 amino acids or more at either terminus, where the extension amino acids may be the same or different from the CD4 sequence. The sequence will usually have at least greater than 2 amino acids of the natural sequence on each side of the cysteine. The numbering of the amino acids is as set forth in Maddon et al., Cell (1985) 41:93-104, The peptide sequences may be modified by terminal amino acylation, for example, acetylation; carboxy amidation, for example, with ammonia, methylamine and the like.
It will be appreciated that the amino acid sequence need not correspond exactly to the sequences given above, but may be modified by from 1 to 3 conservative or non-conservative mutations, including deletions and insertions involving not more than about 1 amino acid, without significantly afrecting the activity of the product. Therefore, the polypeptides may be subject to various changes, such as insertions, deletions, and substitutions, either conservative or non-conservative, where such changes provide for advantages in their use. By conservative substitutions is intended combinations such as gly, ala; val, ile, leu; asp, glu; asn, gln; ser, thr; lys, arg: and phe, tyr, trp. Usually, the sequence will not differ by more than 20% from the sequence of the epitope of the CD4 molecule except where additional amino acids may ae added at either terminus for the purpose of providing an "arm" by which the peptides of this invention may be conveniently linked for immobilization. The arms will usually be at least about 5 amino acids and may be 50 or more amino acids.
The peptides of the present invention may also be conjugated with or linked to a soluble macromolecular entity. Conveniently, the macromolecular entity may be a polypeptide, either naturally occurring or synthetic, to which antibodies are unlikely to be encountered at high levels in human serum. Illustrative polypeptides include poly-L-lysine, bovine serum albumin, keyhole limpet hemocyanin, bovine gamma globulin and the like. The choice is primarily one of convenience and availability.
The conjugates will generally comprise at least one molecule of the peptide of the present invention per macromolecule and usually not more than about 1 per 0.5 kDal and preferably not more than about 1 per 2 kDal of the macromolecule. Of course, one or more different peptides may be linked to the same macromolecule.
Conjugation or linking may be accomplished by any conventional method employing such reagents as p-maleimicobenzoic acid, p-methyldithiobenzoic acid, maleic acid anhydride, succinic acid anhydride, glutaraldehyde and the like. The linkage may occur at the N-terminus, c-terminus, or at a site intermediate to the ends of the molecule. Futhermore, peptide may be derivatized for linking or linked while bound to a support, or the like.
The peptides can be prepared in a wide variety of ways. The peptides, because of their relatively short size, may be synthesized in solution or on a solid support in accordance with standard techniques. Various automatic synthesizers are commercially available and can be used in accordance with known protocols. See for example, Stewart and Young, Solid Phase Peptide Synthesis, 2nd Ed., Pierce Chemical Company, 1984; and
Tam et al., J. Am. Chem. Soc. (1983) 105:6442. Alternatively, hybrid DNA technology may be employed where a synthetic gene may be prepared by employing single strands which code for the polypeptide or substantially complementary strands thereof, where the single strands overlap and can be put together in an annealing medium so as to hybridize. The nybridized strands may then be ligated to form the complete gene and by choice of appropriate termini, the gene may be inserted into any suitable and readily available expression vector. See for example, Maniatis et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, 1982. Alternatively, the region of the genome coding for the peptide may be cloned by conventional recombinant DNA techniques and expressed (see Maniatis, et al, supra).
DNA coding sequences based upon the known sequence for CD4 may also be used to obtain the peptide. Fragments from these sequences may be employed for expression of peptide fragments, conservative base changes may also be made, where the modified sequence(s) code for the same amino acid(s), or non-conservative changes in the coding sequence may be made, where the resulting amino acid may be a conservative or non-conservative entity.
The coding sequence may be extended at either the 5'- or 3' - terminus or both termini to extend the peptide, wnile retaining its epitopic site. The extension may provide for an arm for linking, for providing antigenic activity, or the like.
For expression, the coding sequence is provided with start and stop codons, promoter and terminator regions and usually a replication system to provide an expression vector for expression in a cellular host, for example prokaryotio or eukaryotic, bacteria, yeast, mammal and the like.
Once the peptide has been expressed by recombinant DNA methods, and purified to a suitable degree, the thio group may be blocked with any convenient reagent which replaces the hydrogen of the mercaptan of the cysteine. As indicates for thioethers, active halogens, active pseudohalogens or active oiefins may be used. The reaction temperature may range from about 0 to about
50 C, usually 10-30 C, with the reaction time ranging from about
0.5 to 24 hours. Polar solvents, particularly aqueous solvents, may be employed and organic solvents may be present up to about
60 volume %. Organic solvents include acetonitrile, acetone, diethyl ether, dimethylformamide and the like. with active halides, a mild basic acid accepter is usually required such as carbonate, bicarbonate and the like. Generally an excess of the blocking agent is employed.
To block with a thio group, various disulfides may be employed, such as methyldithio, p-nitrophenyldithio,
2-pyridyIdithio and the like and the second sulfur may be joined to a methylcarboxy ester, aryl or other convenient group. The conditions for displacement are well known to one of ordinary skill in the art and need not be illustrated here.
After the reaction is complete, the product is isolated and purified according to standard conventional techniques.
The peptides of the present invention and compositions may be used in vitro and in vivo. In vitro, the compounds or compositions may be employed for detecting the role of CD4 in viral infection, preventing infection of CD4-bearing cells including T cells and macrophages susceptible to HIV, inhibiting
CD4-dependent viral cytopathic effects and the like. In vivo, the compounds or compositions of the present invention may be used prophyiactically or therapeutically for preventing infection or inhibiting proliferation of the virus and infection of or cytopathic effects on additional T cells or other CD4-bearing cells by inhibiting HIV-CD4 interactions related to clinical manifestation of viral disease. The composition can be made with any suitable pharmaceutically acceptable carrier and can be administered in any suitable anti-viral amount by any suitable route such as intramuscularly, intraperitoneally, intravenously, parenterally, intranasally, topically, orally and the like. Any physiologically acceptable medium may be employed, such as deionized water, saline, phosphate buffered saline, aqueous ethanol, and the like. The effective anti-viral amount of the active ingredient(s) will depend upon the solubility, particular use, route and frequency of administration, and the like. The amount used will also depend upon the relatives antisyncytial activity of the composition employed. Generally, the dosage will be in the range of about 0.2 mg to about 500 mg, preferably in the range of about 10 mg to 100 mg.
The following specific examples are illustrative. A. Preparation by Peptide Synthesizer: Snythesis or target peptides and their derivative products was carried out on an Applied Biosystems, Inc., Model 430A Peptide Synthesizer, essentially as described in the User's Manual supplied by the manufacturer of the machine. Synthesis begins with the alphaamino deprotection of the first (C-terminal) amino acid in the chain, which is linked to the polystyrene/divinylbenzene-cross- linked resin via a 4 (oxymethyl) phenylacetamidomethyl bridge. Activation occurs in trifluoroacetic acid/dichloromethane (TFA.DCM), followed by neutralization in N,N-diisopropylethylamine/N,N-dimethyIformamide (DIEA/DMF), and washing in DMF. Addition of the next amine acid residue occurs by mixing in the reaction vessel (RV) the deprotected rasin-linked growing chain, and activated incoming amino acid (N- and R-blocked) in DMF. The activated incoming amine acid is prepared by (1) dissolution or the amino acid with alpha amino protected with t-butyloxycarbodiimide (DCM); (2) addition of 0.5 equivalents of dicyclohexylcarbo-diimide (DCC) to form the symmetric anhydride; and (3) transfer to the concentrator and DCM/DMF exchange.
Dicyclohexylurea formed in the reaction is left in the activation vessel and is dissolved in methanol and discarded prior to the activation of the next amino acid in that vessel. Some fragments are prepared as esters of 1-hydroxybenzotriazole (HOBT) in the activation vessel prior to the concentration and coupling. Each step ends with N-deprotection, neutralization oind washing of the resin. Functional groups on the amino acid side chain are blocked during synthesis by side-chain derivatization of each amino acid and esters or amides of: Tos (R,H) , o-benzyl (D.E), benzyl (S,T, in some cases C) Br-Z (Y), Cl-Z (K), or 4-Mebenzyl (C).
Following synthesis, the peptide is cleaved from the resin by treatment with HF at 0ºC for two hours with stirring, with the addition as specified of anisole, thioanisole. p-cresol, dimethylsulfide (DMS). HF and other volatile components were removed under vacuum, resin and peptide rinsed with ethyl ether, peptide dissolved in ammonium acetate, and resin removed by filtration. After lyophilisation, the peptide mixture, including side-chain protected and unprotected full-length peptide deletion sequences, anisolated peptide. and rearranged and oxidited peptide was designated "post resin peptide X". After dissolution in 10% acetic acid or ammonium acetate and passage over G-10 Sephadex and G-25 Sephadex, respectively, to remove low-molecular weight side products including trace amount of scavengers, the mixture was designated "post-G-10 peptide X". After dissolution in 0.1% TFA or ammonium acetate and chromatography on reverse phase HPLC, the individual components were designated "post-HPLC peptide X peak (or fraction) Y" , or simply "post-HPLC peptide X" if a peak comprised a single pure authentic peptide by amino acid analysis, Edman degrading sequencing and/or fast atom bombardment mass fragmentography (see Appendix A for specific conditions).
Peptides were then submitted to one or all of the following four tests. Some of the peptides were also derivatized, after purification, by incubation with alpha-bromo-toluene or alpha-bromo-xylene to obtain the benzyiated adducts of cystein residues within the peptide (Erickson et al, J. Amer. Chem. Soc. 95:11, 1973). A typical protocol for derivatization (post-synthesis alkyl benzylation) is as follows: About 5 mg (2.2 μmol) of peptide of interest (such as H, post HPLC shown to be authentic human CD4 76-94 by FAB mass fragmentography and Edman sequencing) was placed in the flask, and about 1.5 ml triethylamine and about 1.22 mg 4-methγlbenzyl bromide (6.6 mmol) was added. Reaction mixture was stirred for sufficient time (6-16 hrs.) at 25ºC, vacuum evaporated for about 1.5 hrs., re-suspended in 0.01 mM ammonium acetate, pH 7.0, extracted with one volume of onloroform if necessary, and the resultant aqueous phase lyophilized. The lyophilized material was reconstituted in PBS and tested for anti-fusion activity in the assay of Lifson et al , (Nature 323:725-728, 1986).
B. Fusion assay: Post-resin, post-G-10 or post-HPLC peptides were dissolved in phosphate-buffered saline to a nominal concentration (based on the molecular weight of the desired underivatized peptide of 1000 μM and two fold dilutions of this concentration down to 10 μM. Peptides were added, in a volume of 50 μl, to 25 μl of RPMI 1640/20% fetal calf serum containing 50000 H9/HTLVIIIB cells in 96 well flat-bottomed culture dishes and incubated at 37ºC for 30 minutes, after which time 50000 VB cells in 25 μl culture medium were added. Cell fusion was scored at 1-24 hours as described by Lifson et al, supra.
C. Syncytial Center Assay: 50 μl of each peptide in PBS was mixed with 50 μl of 50-280 syncytial-forming units (SFUs) of HTLV-IIIB, RF or CC virus in PRMI 1640. Tubes were incubated at room temperature (about 22°-25°C) for 60 minutes, and 40 μl aliquots of each used to inoculate CEM cells. After an hour at 37°C, inoculum was removed, minitray well fed 100 μl of fresh RPMI mediums, and syncytial centers scored at day 2 post- infection. In some experiments, supernatants were harvested at day two for measurement of the viral antigen p24 as an additional confirmation of blockade of infection.
D. Inhibition of antibody binding to CD4+ cells estimated by
FACS: VB CD4+ cells in 10 μl of medium are added to 100 μl of the anti-CD4 antibody S3.5 labeled with FITC, and previously incubated at 37ºC for one hour with 500 μM peptide. S3.5 is a murine IgGI monoclonal antibody which binds to the CD4 molecule within the Leu3A/OKT4A epitope cluster and block HIV infection as well as other CD4-dependent T-cell functions. Sufficient S3.5 is added to cells to saturate their CD4 antigen. Cells are incubated an additional 45 minutes at 37°C and analyzed by flow cytometry.
E. Mixed lymphocyte Reaction (MLR) : Peripheral blood mononuclear leucocytes were separated from heparinized blood from healthy donors by Ficoll-Kypaque centrifugation. Stimulator cells from donor 1 were irradiated to 3000 rad and 50000 cells mixed with 50000 non-irradiated responder cells from donor 2, in 200 μl RPMI/10% pooled male human AB serum. Peptides were added to a final concentration of 100 μM. Reactions were performed in triplicate for each stimulator-responder pair, in the presence and absence of peptides. Mixed cell were cultured at 27°C for 6 days in 10% CO2. One μCi of H-thymidine was added, the cells cultured overnight (about 12-16 hours at 37°C) and harvested on glass fiber filters and counted.
The results are summarized in Tables I, II and III. In Table I, the structure of the peptide synthesized, its degree of purity upon testing, and its activity in each of the four assay systems examined are given. In Table II, the activities of various deletions from the 10 mer which were active in the initial screen to inhibit fusion of HTLVIIIB infected and noninfected CD4-posιtive T-lymphoma cells are given. Table III shows the effect of anti-receptor polypeptide (H) of the present invention on syncytium formation by three different infectious viral stocks of HIV.
Figure imgf000085_0001
a) structure given by amino acid residue numbers in CD4. if modified, preceded by one letter symbol for the added amine acid. Letter which follows slash is the code letter for a unique synthetic preparation. b) all post-G-10 preparations give a predominant peak on HPLC. H post HPLC is a single peptide of sequence CD476-94 without derivatization, as confirmed with amino acid composition, sequence (Edman), single peak on HPLC, and FAB mass fragmentography. c) dose given is that required to completely inhibit fusion at 24 hours in the standard assay, n.a. not active at 500 μM, the highest dose tested. d) dose given is that required to decrease the number of syncytial- forming centers two days after infection by more than 90%. n.a., not active at 500 μM, the highest dose tested. e) all compounds tested at 100 μM, none inhibit MLR at this dose. f) dose given is that required to decrease S3.5 binding to CD4- positive cells more than 50%, measured by flow cytometry. n.a. not active at 100 μM, the highest dose tested.
Table II . Anti-syncytial activity of deletants and altered-sequence variants of CD4cys-faenzyI(75-94) define a core anti-synctyial peptide.
Figure imgf000086_0001
Peptides were tested as post-resin peptide mixtures as described Anti-syncytial activity was assessed as described in the text. Not active indicates no anti-syncytial activity at early (6 hours) or late (24 hours) time points at the highest dose tested, 500 μM. TABLE IIA
Post-synthesis benzylation of S-benzyl-CD4(83-94) imparts anti-syncytial activity to the e tide.
Figure imgf000087_0001
The anti-syncytial activity of three preparations of CD4(83-94)BZL were compared. The three preparations were A. TYICbzlEVEDQKEE, the peptide mixture obtained as described in Figure3 . by solid phase synthesis of the desired peptide TYIC(S-benzyl)EVEDQKEE, B. The purified peptide S-benzyl-CD4(83-94) obtained by HPLC fractionation of the peptide mixture described in A., C. The peptide mixture obtained by liquid-phase derivatization of B. afforded by addition of 7.1 μmol of alpha-bromoxylenc to 2.2 μmol of S-benzyl-CD4(83-94) dissolved in 1.5 ml of triethylamine followed by stirring at room temperature for 16 hours, removal of volatile material under vacuum, dissolution in 10 mM ammonium acetate, pH 7.0, extraction with one volume of chloroform, and repeated Iyophilization of the resultant aqueous phase.
Table IIB.Anti-syncytial activity of CD4(76-94) as Benzyl or Xylyl Derivatives.
Preparation Activity
CD4(76-94) not active
Xylyl CD4(76-94) 125 μM
Benzyl CD4(76-94) 60 μM
5 mg of CD4(76-94) purified by HPLC as described in Figure 2 was submitted to chemical derivatization as described . Resultant peptide derivatives were evaporated to dryness, reconstituted in water, extracted with one volume of chloroform, and the aqueous phase lyophilized and tested for anti-syncytial activity in the standard assay.
Potency is expressed as the lowest concentration of the peptide mixture (nominal concentration based on mass of the input peptide and formula weight of the parent peptide LKIEDSDTYICEVEDQKEE) capable of complete inhibition of HIVHXB-2-induced cell fusion. Not active, no anti-syncytial activity at ≤500 μM.
Figure imgf000088_0001
a) each fresh (CC) or frozen (IIIB, RF-2) viral stock was brought to room temperature, diluted 1:1 with peptide in PBS, and allowed to stand for 60 min at room temp. This mixture then added to CEM cells in micro-titre wells. Incubation at 37ºC for 50 min was followed by a rinse. Cells then allowed to grow to confluent monclayer over next 48 hours. Number of syncytial centers per well counted. b) % inhibition syncytia formation equais 1, minus the number of syncytium counted in the presence of the peptide divided by the number of syncytia in the control (untreated, infected) wells, times 100. The chemical purity, activity, stability and other properties of the synthetic peptides prepared in accordance with the present invention, are now described. The amino acid sequences are shown in single letter code.
It is noted that a number of various fragments of CD4 receptor did not show any activity at all (data not shown) indicating that a specific molecular structure and configuration are required. As shown hereunder, two preparations (post-G10 H and peptide E) were found to be effective as the inhibitor of ligand-receptor interaction (vide infra). LKIEDSDTYICEVEDQKEE (CD76-94)
Peptide H Cleavage conditions were 1 ml thioanisole, about 20 ml HF. Tested as a post G-10 (one major peak on analytical HPLC, no other peaks visible). This material is active in the fussion assay. It has the correct sequence by Edman degradation sequencing (note no cys in this sequencing method).
Peptide H(r): Resynthesis of peptide H. Cleavage conditions were 1 ml thioanisole, about 20 ml HF, same as for H. Post resin mass spec shows molecular ion within a complex spectrum, and -HOH (dehydro) ion as well. Post G-10 (100 mg on, 14 mg recovered from 10% acetic acid chromatrography). Mass spec post G-10 shows dehydro peak, no sign of parent peak. The post G-10 H(r) showed complete inhibition of fusion at 100 uM at 2 and 4 hours but some breakthrough overnight, and complete inhibition of fusion at 500 μM at 2, 4 and 24 hours.
Peptids Bzl H: On-line bensylation, with tBcc-Cys-br. Taken from resin with HF in two batches. First batch gave about 40 mg, active in fusion assay at 60 uM. Second batch gave about 270 mg, active in fusion assay at 120 uM. TYICEVEDQKEE (CD83-94)
Peptide Bzl H8-19: Synthesis with bzl Cys instead of methylbzl Cys. Potent as crude resin at 120 μM in fusion assay. Synthesis of Peptide H Analogs
A series of peptide H analogs including those with substitutions other than a benzyl group on cysteine residue number 86 were also synthesized. The following methods were employed.
Method 1. One and one-half mg of purified peptide H was dissolved in 120 μl acetonitrile plus 150 μl deionized water and 60 ul sodium bicarbonate (0.5 N). Acetonitrile, 200 μl, was added followed by a 40 molar excess of benzyl bromide or other reaction compound (see Table 2). The mixture was incubated at room temperature for 1 hr, then 2 μl of triethylamine was added to the reaction mixture which was further reacted at room temperature (about 22º-25ºC) for 1 hr. Forty microliters of ammonium bicarbonate (1 M) was added, then 1 hr later the reaction mixture was reduced to dryness in a centrifugel vacuum concentrator. The desired powder was reconstituted in PBS and used directly in the cell fusion assay (vide supra)
Method 2. This method is identical to Method 1 except that the addition of triethylamine was avoided in the reaction. The dry powder was dissolved in PBS plus 10% tetrahydrofuran and an equal volume of chloroform. The mixture was vortexed, then the water layer and interface were collected and used for bioassay.
Method 3. one mg of pure peptide H was dissolved in 400 ul of 60% acetonitrile and 40-80 ul sodium bicarbonate (0.05 M). An eight molar excess of benzyl bromide or other reaction compound (see Table 4) was then added to the peptide H solution and reacted at room temperature for 6 hrs. After completion of the reaction, the product was dried by centrifugal vacuum concentration and dissolved in 5 mM sodium bicarbonate. Then one volume of PBS was added. The solution was further mixed with an equal volume of chloroform and allowed to partition by mixing of the soulution. The chloroform layer was removed and the aqueous phase used for bioassay. The results are shown in Table IIIA.
Figure imgf000091_0001
The most effective derivatives of peptide H were those prepared using benzyl bromide, 2-chicrobenzyl bromide, 4-(N-maleimidomethyl) cyclohexane-1-carboxylic acid N- hydroxysuccinimide ester or 3-(2-pyridyidithio) propionic acid N-hydroxysuccinimide ester. The two derivatives prepared using naphthyl reaction compounds were ineffective at the concentrations tested. Benzyl cysteine, including "N-term"-T- BOC-blocked and CBZ-blocked "N-term" blocked benzyl cysteine, had no effect on HIV-induced cell fusion at all concentrations tested (up to 500 μM) . Demonstration that multiple derivatization of the parent 12-mer peptide structure produces biologically active (anti-viral) material.
Biologically inactive, pure TYIC(benzyl)EVEDQKEE was solution derivatized as fellows:
Purified S-benzyl-TYTCEVEDQKEE (2.2 μmol) was dissolved in 1.5 ml triethylamine to which was added 7.12 μmol of alpha-bromoxylene. The solution was stirred at room temperature for 16 hours, and volatile material removed under vacuum. Remaining material was dissolved in 10 mM ammonium acetate, pH 7.0, extracted with one volume of chloroform, and repeatedly lyophilized. The resultant: material was active at a nominal concentration of 250 μM in the standard fusion assay. Synthesis of Pentide E.
The peptide of sequence corresponding to CD4(1-25) and including an N-terminal tyrosine residue ( YQGNKVVLGKKGDTVELTCTASOKKS) was synthesized exactly as described for peptide H, and the post- resin peptide mixture (exactly as described for peptide H) was dissolved in phosphate-buffered saline and tested for anti- syncytial and anti-infection activity in two standard assays described herein supra. The peptide mixture was without effect to inhibit HIV-induced cell fusion, but the mixture inhibited infection cf CEM-SS cells as measured in the syncytial-forming quantitative microtiter assay, using four isolates of HIV-1 as shown in Figure 4. The data are for peptide incubation with virus 30 minutes before inoculation, peptide presence during the 60 minute inoculation, and no peptide present during the following 5-6 days prior to counting syncytia in each cell culture well. As shown herein, cysteine is one candidate for a residue within the sequence of CD4(76-94) that could be benzylated in the reaction performed. The importance of the cysteine residue, whether derivatized or free, in generation of biological activity upon synthesis of CD4(76-94) was confirmed by the synthesis of serinyl and alanyl congeners of CD4(83-94) and the phenylalanyl congener of CD4(75-94)amide. Substitution of the amino acids serine or alanine for cysteine in otherwise identical solid-phase syntheses of CD4(76-94) or CD4(83-94) resulted in peptide mixtures without detectable anti-syncytial activity (Table 5). The phenylalanyl congener of CD4(76-94)amide was likewise inactive. In view of the comparable activity of the CD4(76-94) synthetic mixture and the benzylated peptides, several peptide mixtures were synthesized as s-benzyl cysteine congeners of CD4(76-94). In these syntheses, the cysteine residue is added to the growing peptide chain as t-Boc-S-benzyl-cysteine rather than t-Boc-S-methylbenzyl-cysteine, and remains largely S-protected after HF cleavage, compared to complete or nearly complete removal of the S-methylbenzyl block group used in the previous syntheses of CD4(76-94). In several independent syntheses, the peptide mixture obtained after automated synthesis of the desired peptide S-benzylCD4(83-94) was approximately three-fold more potent to inhibit HlV-induced cell fusion than the peptide mixture obtained after synthesis of CD4(83-24) using t-Boc-S- methylbenzyl-cysteine. A series of deletion peptides were synthesized using t-Boc-S-benzyl-protected cysteine, and tested as inhibitors of HIV-induced cell fusion. The results indicate that the core sequence for this biological activity is CD4(83-89 ) (Table 5). Furthermore, it was found that the biological activity requires the correct sequence of the core peptide, as well as derivatization, since a nineteen-residue peptide with the same composition but slightly altered sequence compared to CD4(76-94) had no activity as an anti-syncytial agent. The activity was attributable to peptide material, since proteolytic digestion completely abolished the anti-syncytial activity of the active peptide preparation. Furthermore, a core peptide [S-benzylCD4(83-89)] retaining significant biological activity was defined. Syntheses of CD4(84-94) or CD4(84-69) yielded material with no anti-syncytial activity, while addition of N-terminal threonine 83 to either sequence restored anti-syncytial activity. Non-specific effects of threonine addition were considered unlikely since (l) a threonine-rich control peptide synthesized under identical conditions was completely devoid of biologica] activity, and (2) the threonine-containing nineteen-residue peptide DQKEEELKIEDSDTYICEV of identical composition to the CD4(75-94) peptide was also without detectable anti-syncytial activity.
These results indicate that anti-syncytial activity could be generated by two independent routes, both requiring the existence of a parent peptide. Thus biologically active material could be recovered either from the peptide mixture after solid-phase synthesis of the CD4(76-94) peptide, by xylyl- or benzyl-derivatization of inactive authentic CD4(76-94), or by xylyl derivatization of inactive authentic S-benzylCD4(83-94). The S-benzylCD4(83-94) material partially purified bv HPLC was stable to heating at 65ºC and the biological activity was destroyed by digestion with Pronase.
As indicated herein supra the anti-viral activity of these CD4 peptide preparations is specific and restricted to CD4- dependent virally induced cell fusion. CD4(76-94) at concentrations up to 500 uM had no effect on HTLV-I-induced cell fusion in vitro, Likewise, activity appears to be restricted to inhibition of OD4 function related to viral interaction, since complete inhibition of HIV-induced cell fusion could be observed at a dose of the CD4(75-94) peptide which did not affect the MLR response (vide supra). Without being bound to any theory, it is postulated that the mechanism of action of these CD4-derived peptides may involve competitive blockade of viral attachment to CD4 via peptide binding to the CD4-combining region of the HIV gp120 glycoprotein. Consistent with this proposed mechanism of action, the partially purified S-benzyl-CD4 (83-94) peptide blocked fusion between HlV-infected T cells and CD4-expressing T- cell lines or CD4-expressing peripheral blood-derived cells, independent of the isolate of HIV used in the assay and also blocked the CD4-dependent fusion induced by the structurally variant simian immunodeficiency virus.
In summary, several 12-25 amino acid residue containing fragments of the T4 molecule, the receptor for the human immunodeficiency virus, were tested for their ability to inhibit fusion of HTLV-III -infected and non-infected CD4+ human lymphoma cells, to inhibit CD4 antibody binding to CD4+ cells by various isolates of HIV, and for their ability to block the CD4+ CEM cells by various isolates of HIV, and for their ability to block the CD4-dependent mixed lymphocyte reaction in human peripheral blood leucocytes. It is noted that none of the fragments tested were active as pure peptides, but an unfractionated preparation of one of the syntheses, that of the peptide corresponding to residues 76-94 of the T4 antigen : Post G-10 H) inhibited fusion and infection at concentrations between 125 and 500 uM. This effect was reproducible across several separate syntheses of the peptide tested in three different laboratories. An S-benzyi and an S-methylbenzyl derivative of this peptide was produced by two separate laboratories using similar but distinct published protocols for adding the benzyl moiety to a sulfhydryl group in the polypeptide without derivatization of other weaker nucleophilic attaching groups found in the peptide. Each of these preparations was active in inhibiting giant cell formation between infected and non-infected CD4+ cells in vitro . An active peptide could also be produced by modifying the synthesis of the authentic peptide such that a benzyl instead of a methylbenzyl protecting group was incorporated into the growing chain of cystein. affording a peptide with cystein derivative more stable to HF cleavage than the original compound. This material was also efficacious in inhibiting fusion. In addition, chloroform extraction of an aqueous solution of the original synthesis of peptide H afforded at the interface of the organic/aqueous layers material which was potent and completely efficacious at 30 μM to inhibit CD4+-dependent fusion between HTLV-IIIS infected and non- infected human lymphoma cells. This represented about 3-fold increase in the specific activity of the derivatized peptide H material.
It was further found that a shorter, benzyiated version [CD4{83-94)BZL; was a potent inhibitor of HIV-induced cell fusion. This material was prepared and partially purified by collection of a single UV-absorbing peak after fractionation using reverse-phase (C8) chromatography. CD4 ( 83-94 ) BZL was tested for its ability to inhibit infection of CEM-SS cells by HTLV-IIIB (Fig. 1) . When CD4 ( 83-94 ) BZL was present only during the sixty minute period of viral inoculation, the IC50 . The dose required to achieve a 50% reduction in the number of syncytia formed in peptide-treated versus virus-infected, non-treated controls) for this peptide preparation was approximately 63 uM (Fig. 1A). Inhibition of infection rather than inhibition of cell fusion following infection appears to be the mechanism of action of CD4(33-94)BZL as well as the CD4(78-94) peptide mixture, since decreased numbers of syncytia were observed five-six days after viral inoculation, despite the fact that peptide was present only during the initial one hour viral absorption step of the assay. When the peptide was present during the one-hour inoculation period, and thereafter in the culture medium until syncytia were scored five days later, an eight-fold increase in CD4(83-(4)BZL anti-viral potency resulted ta shift in the IC50 from 83 to 8 μM (Fig. 1A). This experiment also demonstrated that the peptide derivative at concentrations up to 125 μM had no apparent toxic effects on CEM-SS cells even during five days exposure in vitro (Fig.lC).
The findings presented herein now provide a "process principle" for obtaining an antiviral agent. The principle is that the viral receptor is fractionated into various smaller entities. These entities are then separated and purified. The purified entities, if inactive as antiviral agent, are then derivatized as described in detail herein and thus biologically active antiviral peptide derivatives are obtained. In the present instance, a 19mer pure peptide was reduced to a 12mer pure peptide which was then converted to a S-benzyl 12mer. An inactive peak 4 was then converted by solution derivatization to an active peptide peak 7 which was active as an antiviral agent at the nominal concentration of 32 uM. Thus a synthetic, isolated, substantially pure, biologically active product is obtained by the process of the present invention.
In accordance with the principle enunciated herein, the following are noted. It was found that peptide G (25mer comprising CD4 51-75) blocks antibodies directed against CD4 molecule. A 19mer molecule (such as 71-89. 72-90, 73-91, 74-92, 75-93, 75-94) could partially inhibit HIV infection; 12mer (83-94) shows antiviral property and 7mer (83-89) is the core peptide; an extension of N-terminus of CD4 providing improvement in biological activity to inhibit infection.
It should be noted that no strain of HIV or SIV has been identified which does not employ the CD4 molecule to gain entry into T-lymphocytes. To further determine that the benzylated CD4 derivatives acted as competitive blockers of the CD4 binding site of retroviruses, the efficacy of the peptides to inhibit infection of CEM-SS calls by other structurally variant HIV-isolates was also tested. CD4(83-94)BZL inhibited infection of CEM-SS cells by HIVcc, HIVmn and HIVRFII, as well at HTLV-IIIB. Inhibitation was virtually complete at concentrations less than 125 μM (Table IV). CD4983-94)BZL also effectively inhibited HIV-induced cell fusion regardless of the isolate of HIV-3 used in the assay. Inhibition of fusion by CD4(83-94)BZL occurred whether fusion was induced using a CD4-positive lymphoid indicator cell line, or antigen-activated freshly isolated human peripheral blood leucocytes.
CD4(83-94)BZL is a potent and efficacious inhibitor or cell fusion induced by simian immunodeficiency virus as well (Table IIIA). The amino acid sequence of the large envelope glycoprotein of SIV is quite different from that of HIV-1, and both envelope proteins are significantly structuralIy different from that of KIV-2. the ability of CD4(76-94)BZL to inhibit infection by KIV-2 was also tested and the peptide was found to inhibit infection of CEM-SS cells by bath viruses with similar potenrcy (Table V) .
A11 of these data provide strong, direct and indirect evidence that the anti-viral activity of the original synthetic preparation of peptide H resides in a side fraction (most likely an S-derivatized side fraction), which is completely efficacious at nominal concentration of 30 μM, as an KIV-specific antiviral agent without activity to disrupt endogenous CD4-dependent immune functions in vitro. "On-line" S-benzyl-containing syntheses of peptide H lacking one or more residues at the C- or N-terminus of the molecule have been constructed, and serve to demonstrate that the N-terminal sever, residues of the peptide, and at least one of the C-terminal glutamic acid residues, are not essential for anti-viral activity. On the other hand, this core undecapeptide is responsible for anti-viral activity in a sequence dependent way, since removal of the eighth N-terminal residue, removal of the C-terminal hexapeptide, or removal of the C-terminal hexapeptide and replacement in a different order at the N- terminus of the molecule, result in peptides totally without anti-viral activity.
Since HIV is known to have a high degree of variability in its structure, a multivalent group-specific vaccine will be required if the vaccination is chosen as the method of combating HIV infection. The present invention avoids this problem because the conservation of the receptor for the virus is exploited. For, although the virions may be slightly different, they still share the property of binding to the CD4 molecule and thus share the property of inhibition by the binding epitope of the CD4 molecule. Data with two other isolates of HIV, besides HTLVIIIB, which differ significantly in their sequence in the envelope region, indicate that infection of CD4-positive cells by all three isolates is inhibited by peptide H, but to different degrees, reflecting different affinities of each virion for the CD4 molecule (Table III).
Because of their anti-receptor property, the polypeptide derivatives of the present invention could function as a short-acting immunosuppressant and be useful in transplantation and grafting.
The results presented herein also indicate that hybrid molecule of two separate epitopes could also be combined for example with a disulfide bond or a flexible polymethylene linker to give a more potent inhibitor if more than one receptor epitope is found to be involved in ligand binding such as peptides H and E. Accordingly, peptides, E and H are joined to make a peptide E/H heterodimer by disulfide bond formation between the two purified peptides. Without being bound to any theory, it is postulated that since peptides E and H are both active, and are joined by a disulfide bond in the native molecule (CD4) , it is reasonable that the peptide E and H mixtures may become active because they contain derivatives of the respective authentic peptides which are conformationally restricted by derivatization, and therefore have a higher affinity for the HlV envelope glycoprotein than their underivatized, conformationally flexible parent peptides. In this case, the conformation of both peptides would most closely approximate their conformation in the native molecule, and be relatively restricted to this conformation by disulfide bond formation [B.J. Classon, J. Tsagaratos, I.F.C. McKensie, I.D. Walker, Proc. Natl. Acad. Sci. CSA 63, 4499 (1986)]. Thus a peptide E/H heterodimer is produced by disulfide bond formation between the two purified peptides, CD4(1-25) and CDC4(76-94). Accordingly, these peptides are synthesized by solid-phase methodology as described herein and the desired peptides QGNKVVLGKKGDTVELTCTASQKKS and LXIEDSDTYTCEVEDQKEE combined in water and allowed to stand overnight at room temperature with slow oxygen bubbling, to effect dimerization. Dimers are purified by high pressure molecular sieving chromatography and tested for biological activity.
The biological activity of peptides E and H (peptide mixtures) to inhibit infection of CD4-positive cells, and HIV- induced fusion of CD4-positive cells, was then compared. Peptide H and peptide E [YCD4(1-25)] were tested for their ability to inhibit HIV-induced cell fusion or infection of CEM-SS cells by HIV (HXB-2 isolate) by the tests described herein. The results are as follows:
Figure imgf000101_0001
The above results are expressed as concentration required to completely inhibit HIV-induced cell fusion after a 24 hour co- cultivation experiment (fusion) and the concentration required to reduce the number of infectious centers (syncytia) present after six days of culture, following viral inoculation of the cultures in the presence of the peptide for one hour and incubation in peptide-free culture medium thereafter, by more than 50%.
Further data show that antireceptors in the CD4(76-94) region can be structurally refined to distinguish not only between ligands of the CD4 receptor (e.g. antigen in the presence of class II molecules vs. HIV envelope glycoprotein) but also between structural aspects of the same ligand when presented in different biological contexts (here, HIV envelope glycoprotein in intact infectious viral particles versus HIV envelope glycoprotein in cell membrane during cell-cell fusion ). These data are presented below.
Figure imgf000102_0001
The above data show that the syntia-forming quantitative microassay can be used to distinguish effects of the peptides on infection alone (the I9mers are much more active than the 12mer after 1 hour exposure to peptide) compared to effects on HZV- induced cell fusion in which the 12 and 19 mers are about equal.
Of course, the finding that a fragment of a peptide or protein receptor can inhibit, with great efficacy albeit relatively low potency, the binding of the ligand to its receptor, opens a new vista in the design and synthesis of therapeutic agents. When peptide fragments of a receptor are found to inhibit ligand-receptor interaction at a low affinity, the possibility exists of derivatizing these fragments; to increase their affinity for Iigand by restricting their conformational flexibility, or increasing their non-specific binding to the Iigand by altering hydrophobicity or adding covalent modifying agents and the like. Such derivatization of the core active peptide includes substitution, addition of various substituerts on the cysteine sulfur, methylation of glutamic acid, addition of akylating agents, addition of hydrophobic side groups and the like in order to increase the potency and duration of action of the compound.
Without being bound to any specific theory, it is proposed that in the ligand-receptor interaction the Iigand binds to a small number (>.:) of continuous oligopeptide sequences in the receptor. The free energy of this reaction is comprised of both the entropy and enthalpy of binding, the former does not prohibit binding because of the restriction of conformer flexibility of the binding epitopes by the non-binding portions of the receptor molecule and within the epitope itself. It is further postulated that restriction of conformer flexibility contributes to the free energy of binding, and therefore to the affinity of binding of Iigand to receptor, largely by decreasing delta S. Therefore, fragments (or even a fragment) of the receptor involved in binding is identifiable by synthesis from the receptor sequence and subsequent assay for inhibition of ligand-receptor interaction. The potency to inhibit .should be many orders of magnitude less than the ligand-receptor Kd since there is no restriction on conformer flexibility by the rest of the molecule. To accomplish this, synthesis is done on 430A with subsequent controlled HF cleavage to give a mixture of authentic and protected groups to take advantage of conformer flexibility restriction within the peptide sequence. Derivatives of 25 mers based on S-S, hydrophilicity and the like are thus prepared and the crude mixtures are tested for their anti-receptor activity. Then active preparations are purified to homogeneity by standard methods. Then, purification of the specific inhibiting molecule to homogeneity (after test of crude mixture) is accomplished by standard purification techniques.
A pharmaceutical anti-viral composition in accordance with the present invention comprises an effective amount of the anti- receptor compound of the present invention to inhibit viral infection, and pharmaceutically acceptable, non-toxic sterile, carrier.
The present invention also provides a method of inhibiting viral infection comprising administering to a host susceptible of viral infection an effective (anti-viral) amount of the active ingredient (anti-receptor molecule including derivatives or analogs thereof) to inhibit viral infection.
It has been suggested that a mirror-image molecule of a receptor, made on the principles of molecular complementarity, may also inhibit ligand-receptor interaction. However, the amino acid sequence of the peptide "H" of the present invention demonstrates that this theory is not workable in this case.
It is understood that the examples and embodiments described herein are for illustrative purposes only and that various modifications or changes in light thereof will be suggested to persons skilled in the art and are to be included within the spirit and purview of this application and scope of the appended claims.
Table IV. Inhibition of HIV-2 infection of CEM-SS cells by CD4(76-94) post-resin peptide mixture.
Figure imgf000106_0001
Virus inoculation of CEM-SS monolayers was carried out in the test. Viral inocula (HIV-1HTLV-IIIB or HIV-2NIH-Z )were Preincubated in the presence or absence of tne nominal concentrations shown of the post-resin peptide mixture from the automated solid-phase synthesis of the desired peptide LKIEDSDTYICEVEDQKEE. Peptide, when present, was added during viral inoculation and also during subsequent growth tα confluence of the CEM-SS cell monolayer.
Table V. Relative anti-viral efficacy of CD4(83-94)BZL after infection of CEM-SS cells with multiple isolates of HIV-1
Figure imgf000106_0002
Viral stocks of HIV-1MTLV_IIIB, HIV-1RF-II, HIV-1MN and HIV-1cc were prepared as either fresh or frozen cell culture supernatants from HIV infected cells. Viral inocula were pre-treated with varying nominal concentrations of peptide in PBS or complete medium were incubated with DEAE-dextran pre-treated CEM-SS cells for one hour at 37ºC. Inocula were removed from the cultures by aspiration and replaced with fresh medium or medium containing the nominal concentrations of CD4(83-94)BZL shown. CD4(83-94)BzL was prepared as described in detail in the legend to Figure 1A, and represents an HPLC-purified biologically active fraction (peak 7) from the automated solid-phase synthesis of the desired peptide TYICbzlEVEDQKEE. Results are the averages of duplicate determinations (all within 30% of the mean values) in a single experiment repeated at least once with similar results. Table VI. Potency of CD4(83-94)BZL to inhibit fusion induced by several isolates of HIV and by SIV.
Figure imgf000107_0001
CD4(83-94)BZL prepared as described in the legend to Figure 1 was pre-incubated with 50,000 H9 cells infected with the viral isolates HIV-1TJ, HIV-1DV, HIV-1HTLV-IIIB (HxB2) or SlVUC for one hour at 37ºC Levels of viral expression in each cell line were sufficient to allow formation of syncytia upon co-culture with 50,000 VB cells in a volume of 60 ul RPMI 1640 supplemented with heat-inactivated 10% fetal calf serum at a rate and frequency similar to that previously reported for the reference isolate HXB2 scored at four, six and twenty-four hours after co-culture: -, no visible syncytia or pre-syncytial aggregates observed in duplicate wells, 1-4, graded increase in syncytia to the maximum seen in the absence of treatment with peptide or anti-Leu 3A CD4 antibody. Syncytial scores shown are far the end of a twenty- four hour observation period.
Table VII. Comparison of CD4(83-94)BZL potency to inhibit HIV- induced cell fusion of VB indicator compared to acutely activated, fresh huinan peripheral blood inononuclear cells.
Figure imgf000107_0002
The post-resin peptide mixture obtained from the synthesis of the desired peptide TYICbzlEVEDQKEE was pre-incubated for 30 minutes at 37ºC at the nominal concentrations shown. Cells and peptide were combined with either VB cells or phytohemagglutinin (PHA) stimulated PBMCs and cultured at 37°C for 24 hours, at which tim-e syncytia were scored. APPENDIX "A"
Synthesis of peptide H:
The peptide mixture was synthesized on an Applied Biosystems, Inc.430A Automated Peptide Synthesizer. The synthesizer was programmed to couple to a PAM-glutamlc acid resin (0.5 mmol glutamic acid equlvalentz) the amino acids E,K,Q,D,E,V, E,C,I,Y,T,D,S,D,E,I,K, and L as the tBoc, R-blocked derivatives shown in the dynamic run file attached. Double-coupling cyclcs were run for S.D.E.I, K and L (the last six amtno acids of the synthesis). Activation, coupling, washing, deprotection, washing cycles were as described In the 430A User Manual. The resultant resin-coupled peptide mixture from the complete run (approximately 1.5 gm) was air-dried, and placed in the HF cleavage apparatus. 1 ml anisole and 1 ml dimethylsulfide, and approximately 100 μg of p-thlocresol were added, and the mixture placed under vacuum. 18 ml of HF were added under vacuum, and the mixture stirred for one hour at 0 C. Volatlle materials were removed under vacuum over a one-hour period. The resin-peptide mixture was suspended is approximately 30 ml of ethyl ether, and allowed to stir at room temperature for 30 min. The slurry was vacuum-filtered, and suspended in approximately 250 ml of 100 mM ammonium bicarbonate pH 6.3, This suspension was vacuum-filtered to remove resin, and lyophilized overnight. This material constitutes past-resin peptide H, or peptide H mixture, comprising 1) the desired peptide sequence LKIEDSDTYICEVEDQKEE, 2) derivatives of this sequence Including R-protecting groups not removed during HP cleavage, R-protectiog groups or scavengers obtained upon re-adduction during cleavage, 3) deletion peptides generated by premature chain termination during synthesis 4) rearrangements of R-groυps (e.g. gluumine desmidation, pyroglutamyl ring formation, beta-elimination etc.) and peptide backbone (e.g. isopeptide formation) and 5) peptide products resulting from combinations of the above as well as other unehsraeterized intra-molecular and Inter-molecular reactions and rearrangements occuring during synthesis, cleavage, or purification.
Synthesis of peptide T4DTEbzl;
Synthesis was as described above, except the sequence. TYIC(benzyl)EVEDQKEE was the desired peptide, and the corresponding input protected amino acids were the same except for substitution of N-tBoc-S-methylbenzylcystelne by N-tBoc-S-benzylcystelne, and omission of p-thlocrcsol during, the cleavage reaction.
Figure imgf000109_0001

Claims

WHAT IS CLAIMED IS:
1. Anti-receptor compound or derivative thereof which inhibits binding of ligandbto a receptor.
2. The anti-receptor compound of Claim 1 wherein said compound, at least in part, is a polypeptide.
3. The anti-receptor of claim 2 wherein said receptor comprises human CD4 molecule or a portion thereof.
4. The anti-receptor of claim 3 wherein said ligand is a virus.
5. The anti-receptor of claim 4 wherein said virus is human immunodeficiency virus (HIV).
6. The anti-receptor of claim 1 having amino acid sequence expressed in single letter code of
LKIEDSDTYICEVEDQKEE .
7. An anti-receptor compound comprising a sequence of at least seven amino acids o0 human CD4, which sequence includes the cysteine at position 86, wherein the sulfur 0atom of said cysteine is joined to a carbon atom or sulfur atom of a sulfur blocking group, said compound being an inhibitor of CD4-dependent virus-induced cell fusion.
8. The compound according to claim 7, wherein said sequence includes a sequence of at least 5 amino acids of the CD4 and at least one of the C-terminal or N-terminal side of said cysteine.
9. The compound according to Claim 8 , wherein said sequence compris1s amino acids 76 to 94 of CD4.
10. The compound according to claim 7, wherein said cysteine sulfur atom is bonded to a carbon atom of a sulfur blocking group.
11. The compound according to claim 10, wherein said carbon atom is a member of a succinimidyl ring.
12. The compound according to claim 7, wherein said cysteine sulfur atom is bonded to a sulfur atom of a sulfur blocking group.
13. A compound comprising a sequence of at least 10 amino acids of human CD4, which sequence includes the sequence of amino acids 83 to 90 including the cysteine at position 86, wherein the sulfur atom of said cysteine is joined to in aliphatic carbon atom or sulfur atom of a sulfur blocking group, said compound being capable of interfering with CD4-dependent virus-induced cell fusion.
14. The compound according to claim 13, wherein said aliphatic carbon atom is a ring carbon atom of a succinimidyl group.
15. The compound according to claim 14, wherein said succinimidyl group nitrogen atom is substituted with a substituent comprising a carboxyl carbonyl.
16. The compound according to claim 8, wherein said sequence comprises amino acids 76 to 94 of CD4.
17. The compound according to claim 8, wherein said sequence comprises amino acids 79 to 94 of CD4.
18. The compound according to claim 8, wherein said sequence comprises amino acids 81 to 94 of CD4.
19. The compound according to claim 8, wherein said sequence comprises amino acids 83 to 94 of said CD4.
20. The compound according to claim 8, wherein said carbon atom is the methylene of said benzyl group.
21. A composition of matter comprising a polypeptide comprising a sequence of at least seven amino acids of human CD4, which sequence includes the cysteine at position 86, wherein the sulfur atom of said cysteine is joined to a carbon atom of a sulfur blocking group, said composition prepared by the method comprising:
(a) combining in an aqueous solvent, said polypeptide with at least about a stoichiometric amount of a sulfur blocking group containing compound, which compound comprises an active halogen or active olefin functionality, at a temperature in the range of about 0° to 50°C for a time sufficient for said sulfur blocking group containing compound to covalently bond to said cysteine; (b) neutralizing any acid formed; and
(c) isolating said composition of matter.
22. An antiviral pharmaceutical composition, comprising an effective amount of the antireceptor of claim 1 to inhibit viral infection and pharmaceutically acceptable, non-toxic sterile carrier.
23. A method of inhibiting viral infection, comprising administering to a host susceptible of viral infection an effective amount of the anti-receptor of claim 1 to inhibit viral infection.
24. The method of claim 24 wherein said viral infection is caused by human immunodeficiency virus.
25. A method of derivatizing a biologically active antiviral agent from a purified inactive agent, comprising benzylalkylating a purified inactive agent obtained by solid phase process; and acid-cleaving the benzylated product to obtain a bioactive agent.
26. The anti-receptor of claim 1 being a heterodimer of two or more anti-receptor compounds.
27. The anti-receptor of claim 1 being a derivative of a peptide containing amino acid residues 1 to 25 of CD4 molecule.
28. The anti-receptor of claim 27 being a heterodimer of peptide H containing amino acid residues 76-94 of CD4 molecule and peptide E containing amino acid residues 1-25 of CD4 molecule.
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EP0462229A1 (en) * 1989-05-02 1991-12-27 Genelabs, Incorporated Chemically modified cd4 peptide fragments having anti-retroviral properties
EP0462229A4 (en) * 1989-05-02 1992-03-11 Genelabs Incorporated Chemically modified cd4 peptide fragments having anti-retroviral properties
WO1991009613A1 (en) * 1989-12-22 1991-07-11 The United States Of America, As Represented By The Secretary, U.S. Department Of Commerce Synthetic peptides as modulators of functional responses of intact cells
EP0446763A2 (en) * 1990-03-06 1991-09-18 The Calpis Food Industry Co., Ltd. Antigen for producing anti-idiotype antibody, anti-idiotype antibody and method for producing the anti-idiotype antibody
EP0446763A3 (en) * 1990-03-06 1992-04-08 The Calpis Food Industry Co., Ltd. Antigen for producing anti-idiotype antibody, anti-idiotype antibody and method for producing the anti-idiotype antibody
WO1992009305A1 (en) * 1990-11-27 1992-06-11 Biogen, Inc. Anti cd-4 antibodies blocking hiv-induced syncytia
EP0523675A1 (en) * 1991-07-15 1993-01-20 The Calpis Food Industry Co., Ltd. Inhibitory agent against HIV superinfection
EP0670727A1 (en) * 1992-11-13 1995-09-13 Thomas Jefferson University Compounds that inhibit t cell proliferation and methods using the same
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