US5753446A - Mitogen ERK kinase kinase (MEKK) assay - Google Patents

Mitogen ERK kinase kinase (MEKK) assay Download PDF

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US5753446A
US5753446A US08/472,934 US47293495A US5753446A US 5753446 A US5753446 A US 5753446A US 47293495 A US47293495 A US 47293495A US 5753446 A US5753446 A US 5753446A
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mekk
protein
seq
polypeptide
mammalian
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Gary L. Johnson
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National Jewish Health
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National Jewish Center for Immunology and Respiratory Medicine
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Priority claimed from US08/049,254 external-priority patent/US5405941A/en
Priority claimed from PCT/US1994/011690 external-priority patent/WO1995028421A1/en
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Priority to US08/472,934 priority Critical patent/US5753446A/en
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Priority to US08/628,829 priority patent/US6333170B1/en
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Priority to US11/799,749 priority patent/US20080201790A1/en
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Definitions

  • This invention relates to isolated nucleic acid molecules encoding MEKK proteins, substantially pure MEKK proteins, and products and methods for regulating signal transduction in a cell.
  • MAPKs Mitogen-activated protein kinase
  • ERKs extracellular signal-regulated kinases
  • MAPKs are rapidly activated in response to ligand binding by both growth factor receptors that are tyrosine kinases (such as the epidermal growth factor (EGF) receptor) and receptors that are coupled to heterotrimeric guanine nucleotide binding proteins (G proteins) such as the thrombin receptor.
  • the MAPKs appear to integrate multiple intracellular signals transmitted by various second messengers.
  • MAPKs phosphorylate and regulate the activity of enzymes and transcription factors including the EGF receptor, Rsk 90, phospholipase A 2 , c-Myc, c-Jun and Elk-1/TCF.
  • Complementation analysis of the pheromone-induced ignaling pathway in yeast has defined a protein kinase system hat controls the activity of Spkl and Fus3-Kss1, the Schizosaccharomyces pombe and Saccharomyces cerevisiae homologs of MAPK (see for example, B. R. Cairns et al., Genes and Dev. 6, 1305 (1992); B. J. Stevenson et al., Genes and Dev. 6, 1293 (1992); S. A. Nadin-Davis et al., EMBO J. 7, 985 (1988); Y. Wang et al., Mol. Cell. Biol. 11, 3554 (1991). In S.
  • the protein kinase Ste7 is the upstream regulator of Fus3-Kss1 activity; the protein kinase Stell regulates Ste7.
  • the S. pombe gene products Byr1 and Byr2 are homologous to Ste7 and Stell, respectively.
  • the MEK (MAPK Kinase or ERK Kinase) or MKK (MAP Kinase kinase) enzymes are similar in sequence to Ste7 and Byr1.
  • the MEKs phosphorylate MAPKs on both tyrosine and threonine residues which results in activation of MAPK.
  • the mammalian serine-threonine protein kinase Raf phosphorylates and activates MEK, which leads to activation of MAPK.
  • Raf is activated in response to growth factor receptor tyrosine kinase activity and therefore Raf may activate MAPK in response to stimulation of membrane-associated tyrosine kinases.
  • Raf is unrelated in sequence to Ste11 and Byr2.
  • Raf may represent a divergence in mammalian cells from the pheromone-responsive protein kinase system defined in yeast. Cell and receptor specific differences in the regulation of MAPKs suggest that other Raf independent regulators of mammalian MEKs exist.
  • Certain biological functions are tightly regulated by signal transduction pathways within cells.
  • Signal transduction pathways maintain the balanced steady state functioning of a cell.
  • Disease states can arise when signal transduction in a cell breaks down, thereby removing the tight control that typically exists over cellular functions. For example, tumors develop when regulation of cell growth is disrupted enabling a clone of cells to expand indefinitely.
  • signal transduction networks regulate a multitude of cellular functions depending upon the cell type, a wide variety of diseases can result from abnormalities in such networks. Devastating diseases such as cancer, autoimmune diseases, allergic reactions, inflammation, neurological disorders and hormone-related diseases can result from abnormal signal transduction.
  • the present invention provides a solution to the complex problem of identifying putative regulatory compounds which can be used to regulate cellular responses.
  • the present invention provides for an efficient method for identifying compounds capable of specifically regulating signal transduction in a cell, preferably through identifying signal transduction pathways regulated by such compounds, and more preferably through identifying a site of activity of a putative regulatory compound within a complex signal transduction pathway.
  • the present invention provides a method to the identify compounds that act at a specific site in a signal transduction pathway involving MEKK protein.
  • the present invention provides a method for identifying compounds which specifically regulate the activity of elements of the raf-independent arm of the MEK kinase (MEKK) pathway.
  • MEKK MEK kinase
  • Such MEKK pathway includes MEKK, Jun kinase kinase (JNKK) and other members of the MEK pathway, which in turn regulate the activity of signalling molecules such as MAPK, p38 and JNK.
  • JNKK Jun kinase kinase
  • Those of skill in the art will immediately recognize the advantages arising from this invention which include the identification and uses of compounds which act to specifically modify the activity of a signal transduction pathway involving MEKK protein.
  • the present invention provides for an assay using cells having signal transduction pathways involving MEKK to identify regulatory compounds capable of altering signal transduction in a cell and determining at which step of signal transduction pathway the compound exerts its effect.
  • One embodiment of the present invention includes a method to identify compounds capable of regulating a signal transduction pathway in a cell, comprising: (a) contacting a cell having a signal transduction pathway with a putative regulatory compound, in which one of the signal transduction pathways includes an MEKK protein of the present invention; and (b) assessing the ability of the putative regulatory compound to regulate signal transduction in the cell by measuring the phosphorylation of proteins including MAPK, JNK, p38, MEKK, JNKK, Syk, Fyn, and Lyn protein.
  • the step of assessing is performed using antibodies including anti-MEKK, anti-MAPK, anti-JNK, anti-p38, anti-MEK, anti-JNKK, anti-Syk, anti-Fyn, anti-Lyn and anti-phosphotyrosine antibodies.
  • the present invention also includes a method to identify a non-toxic signal transduction regulator that is capable of regulating an MEKK signal transduction pathway in a mammalian cell, in which the signal transduction regulator is identified by contacting a putative regulatory compound with at least one compound involved in an MEKK signal transduction pathway and identifying a signal transduction regulator by assessing the ability of the putative regulatory compound to regulate the MEKK signal transduction pathway, the method comprising contacting the signal transduction regulator with a mammalian cell having a signal transduction pathway, and assessing: (a) the ability of the signal transduction regulator to regulate the MEKK signal transduction pathway; and (b) the toxicity of the signal transduction regulator on the mammalian cell.
  • the step of assessing toxicity is measured by Coomassie blue staining, acridine orange staining, terminal deoxynucelotidyl transferase (TDT) assays, neutral red exclusion, measuring changes in forward light scattering in a flow cytometer, and measuring changes in redox potential of a cell or its ability to reduce a chromogenic substrate.
  • TDT terminal deoxynucelotidyl transferase
  • One aspect of the present invention is a method to identify compounds capable of regulating an MEKK signal transduction pathway in a cell, comprising: (a) contacting a putative regulatory compound of a signal transduction pathway with a recombinant cell transfected with at least one nucleic acid molecule encoding a transcription factor and a reporter protein, and having a transcriptional activator binding nucleic acid sequence, in which the protein encoded by the transcription factor nucleic acid molecule, and the transcriptional activator binding nucleic acid sequence, are capable of regulating the transcription of the reporter protein nucleic acid molecule; and (b) assessing the ability of the putative regulatory compound to regulate the expression. of the reporter protein.
  • the recombinant cell has an activator recombinant molecule comprising a nucleic acid molecule operatively linked to an expression vector, the nucleic acid molecule encoding at least one transcription factor and at least one transcriptional activator.
  • the recombinant cell can further comprise a reporter recombinant molecule comprising a nucleic acid molecule operatively linked to an expression vector, the nucleic acid molecule having at least one transcriptional activator binding nucleic acid sequence and at least one nucleic acid sequence encoding a reporter protein.
  • Yet another aspect of the present invention includes a method to identify compounds capable of regulating a biological response in a mammal, comprising: (a) contacting a mammalian cell with a putative regulatory compound, in which the mammalian cell has a signal transduction pathway involving MEKK; (b) assessing the ability of the putative regulatory compound to specifically regulate the activity of the signal transduction pathway by determining the phosphorylation of MEKK; and (c) administering the putative regulatory compound to an animal to determine the effectiveness of the putative regulatory compound in the regulation of a biological response in the animal, in which the biological response includes an inflammatory response, a response to an infectious agent, an autoimmune response, a metabolic response, a cardiovascular response, an allergic response and an abnormal cellular growth response.
  • the present invention relates to a novel mitogen ERK kinase kinase protein (MEKK) capable of regulating signal transduction in cells.
  • MEKK mitogen ERK kinase kinase protein
  • the present invention includes a novel method for treating disease by regulating the activity of cells involved in such disease.
  • the present invention is particularly advantageous in that the novel product and method of the present invention is capable of regulating a signal transduction pathway that can lead to cellular apoptosis.
  • an isolated MEKK protein is a protein that has been removed from its natural milieu.
  • An isolated MEKK protein can, for example, be obtained from its natural source, be produced using recombinant DNA technology, or be synthesized chemically.
  • an isolated MEKK protein can be a full-length MEKK protein or any homologue of such a protein, such as an MEKK protein in which amino acids have been deleted (e.g., a truncated version of the protein, such as a peptide), inserted, inverted, substituted and/or derivatized (e.g., by glycosylation, phosphorylation, acetylation, myristoylation, prenylation, palmitoylation, amidation and/or addition of glycosylphosphatidyl inositol), wherein the modified protein is capable of phosphorylating mitogen ERK kinase (MEK) and/or Jun ERK kinase (JEK).
  • MEK mitogen ERK kinase
  • JEK Jun ERK kinase
  • a homologue of an MEKK protein is a protein having an amino acid sequence that is sufficiently similar to a natural MEKK protein amino acid sequence that a nucleic acid sequence encoding the homologue is capable of hybridizing under stringent conditions to (i.e., with) a nucleic acid sequence encoding the natural MEKK protein amino acid sequence.
  • stringent hybridization conditions refer to standard hybridization conditions under which nucleic acid molecules, including oligonucleotides, are used to identify similar nucleic acid molecules. Such standard conditions are disclosed, for example, in Sambrook et al., Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Labs Press, 1989.
  • a homologue of an MEKK protein also includes a protein having an amino acid sequence that is sufficiently cross-reactive such that the homologue has the ability to elicit an immune response against at least one epitope of a naturally-occurring MEKK protein.
  • the minimal size of a protein homologue of the present invention is a size sufficient to be encoded by a nucleic acid molecule capable of forming a stable hybrid with the complementary sequence of a nucleic acid molecule encoding the corresponding natural protein.
  • the size of the nucleic acid molecule encoding such a protein homologue is dependent on nucleic acid composition, percent homology between the nucleic acid molecule and complementary sequence, as well as upon hybridization conditions per se (e.g., temperature, salt concentration, and formamide concentration).
  • the minimal size of such nucleic acid molecules is typically at least about 12 to about 15 nucleotides in length if the nucleic acid molecules are GC-rich and at least about 15 to about 17 bases in length if they are AT-rich.
  • the minimal size of a nucleic acid molecule used to encode an MEKK protein homologue of the present invention is from about 12 to about 18 nucleotides in length. There is no limit, other than a practical limit, on the maximal size of such a nucleic acid molecule in that the nucleic acid molecule can include a portion of a gene, an entire gene, or multiple genes, or portions thereof.
  • the minimal size of an MEKK protein homologue of the present invention is from about 4 to about 6 amino acids in length, with preferred sizes depending on whether a full-length, multivalent protein (i.e., fusion protein having more than one domain each of which has a function), or a functional portion of such a protein is desired.
  • MEKK protein homologues can be the result of allelic variation of a natural gene encoding an NEKK protein.
  • a natural gene refers to the form of the gene found most often in nature.
  • MEKK protein homologues can be produced using techniques known in the art including, but not limited to, direct modifications to a gene encoding a protein using, for example, classic or recombinant DNA techniques to effect random or targeted mutagenesis.
  • the ability of an MEKK protein homologue to phosphorylate MEK and/or JEK protein can be tested using techniques known to those skilled in the art. Such techniques include phosphorylation assays described in detail in the Examples section.
  • an MEKK protein of the present invention is capable of regulating an MEKK-dependent pathway.
  • an MEKK-dependent pathway refers generally to a pathway in which MEKK protein regulates a pathway substantially independent of Raf, and a pathway in which MEKK protein regulation converges with common members of a pathway involving Raf protein, in particular, MEK protein.
  • a suitable MEKK-dependent pathway includes a pathway involving MEKK protein and JEK protein, but not Raf protein.
  • One of skill in the art can determine that regulation of a pathway by an MEKK protein is substantially independent of Raf protein by comparing the ability of an MEKK protein and a Raf protein to regulate the phosphorylation of a downstream member of such pathway using, for example, the general method described in related U.S.
  • MEKK induction of phosphorylation of JNK is preferably at least about 10-fold, more preferably at least about 20-fold and even more preferably at least about 30-fold, greater phosphorylation of JNK protein than the phosphorylation induced when using Raf protein. If MEKK induction of phosphorylation is similar to Raf protein induction of phosphorylation, then one of skill in the art can conclude that regulation of a pathway by an MEKK protein includes members of a signal transduction pathway that could also include Raf protein. For example, MEKK induction of phosphorylation of NAPK is of a similar magnitude as induction of phosphorylation with Raf protein.
  • a "Raf-dependent pathway” can refer to a signal transduction pathway in which Raf protein regulates a signal transduction pathway substantially independently of MEKK protein, and a pathway in which Raf protein regulation converges with common members of a pathway involving MEKK protein.
  • the independence of regulation of a pathway by a Raf protein from regulation of a pathway by an MEKK protein can be determined using methods similar to those used to determine MEKK independence.
  • an MEKK protein is capable of regulating the activity of signal transduction proteins including, but not limited to, mitogen ERK kinase (MEK), mitogen activated protein kinase (MAPK), transcription control factor (TCF), Ets-like-1 transcription factor (Elk-1), Jun ERK kinase (JEK), Jun kinase (JNK; which is equivalent to SAPK), stress activated MAPK proteins, Jun, activating transcription factor-2 (ATF-2) and/or Myc protein.
  • MEK mitogen ERK kinase
  • MAPK mitogen activated protein kinase
  • TCF transcription control factor
  • Elk-1 Ets-like-1 transcription factor
  • JEK Jun ERK kinase
  • JNK Jun kinase
  • Myc protein the "activity" of a protein can be directly correlated with the phosphorylation state of the protein and/or the ability of the protein to perform a particular function (e.g., phosphorylate another protein or regulate transcription
  • Preferred MEK proteins regulated by an MEKK protein of the present invention include MEK-1 and/or MEK-2.
  • Preferred MAPK proteins regulated by an MEKK protein of the present invention include p38 MAPK, p42 MAPK (which is equivalent to ERK2) and/or p44 (which is equivalent to ERK1) MAPK.
  • Preferred stress activated MAPK proteins regulated by an MEKK protein of the present invention include Jun kinase (JNK), stress activated MAPK- ⁇ and/or stress activated MAPK- ⁇ .
  • An MEKK protein of the present invention is capable of increasing the activity of an MEK protein over basal levels of MEK (i.e., levels found in nature when not stimulated).
  • an MEKK protein is preferably capable of increasing the phosphorylation of an MEK protein by at least about 2-fold, more preferably at least about 3-fold, and even more referably at least about 4-fold over basal levels when measured under conditions described in related U.S. patent application Ser. No. 08/440,421, entitled “METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • a preferred MEKK protein of the present invention is also capable of increasing the activity of an MAPK protein over basal levels of MAPK (i.e., levels found in nature when not stimulated).
  • an MEKK protein of the present invention is preferably capable of increasing MAPK activity at least about 2-fold, more preferably at least about 3-fold, and even more preferably at least about 4-fold over basal activity when measured under the conditions described in related U.S. patent application Ser. No. 008/440,421, entitled “METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • an MEKK protein of the present invention is capable of increasing the activity of a JNK protein.
  • JNK regulates the activity of the transcription factor JUN which is involved in controlling the growth and differentiation of different cell types, such as T cells, neural cells or fibroblasts.
  • JNK shows structural and regulatory homologies with MAPK.
  • an MEKK protein of the present invention is preferably capable of inducing the phosphorylation of JNK protein at least about 30 times more than Raf, more preferably at least about 40 times more than Raf, and even more preferably at least about 50 times more than Raf, when measured under conditions described in related U.S.
  • an MEKK protein of the present invention is capable of binding to Ras protein.
  • an MEKK protein is capable of binding to a Ras protein that is associated with GTP.
  • an MEKK protein binds to Ras via the COOH terminal region of the MEKK protein.
  • an MEKK protein of the present invention is capable of phosphorylating MEK, MKK, Jun kinase kinase (JNKK) and stress activated ERK kinase (SEK), in particular MEK1, MEK2, MKK1, MKK2, MKK3, MKK4, JNKK1, JNKK2, SEK1 and SEK2 protein.
  • MEK1 and MEK2 are equivalent to MKKl and MKK2, respectively and are referred to 20 as MEK1 and MEK2.
  • JNKK1 and JNKK2 are equivalent to MKK3 and MKK4, which are equivalent to SEK1 and SEK2, respectively, and are referred to herein as JNKK1 and JNKK2.
  • a preferred MEKK protein of the present invention is additionally capable of inducing the phosphorylation of a c-Myc transcriptional transactivation domain protein in such a manner that the phosphorylated transcriptional transactivation domain of c-Myc is capable of regulating gene transcription.
  • the ability of an MEKK protein to regulate phosphorylation of a c-Myc transcriptional transactivation domain protein exceeds the ability of Raf protein or cyclic AMP-dependent protein kinase to regulate a c-Myc protein.
  • an NEKK protein of the present invention is preferably capable of inducing luciferase gene transcription by phosphorylated c-Myc transcriptional transctivation domain protein at least about 25-fold, more preferably at least about 35-fold, and even more preferably at least about 45-fold, over Raf induction when measured under the conditions described in related U.S. patent application Ser. No. 08/440, 421entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • Another aspect of the present invention relates to the ability of MEKK activity to be stimulated by growth factors including, but not limited to, epidermal growth factor (EGF), neuronal growth factor (NGF), tumor necrosis factor (TNF), C5A, interleukin-8 (IL-8), monocyte chemotactic protein 1 (MIPla), monocyte chemoattractant protein 1 (MCP-1), platelet activating factor (PAF), N-Formyl-methionyl-leucyl- phenylalanine (FMLP), leukotriene B 4 (LTB 4 R), gastrin releasing peptide (GRP), IgE, major histocompatibility protein (MHC), peptide, superantigen, antigen, vasopressin, thrombin, bradykinin and acetylcholine.
  • EGF epidermal growth factor
  • NNF neuronal growth factor
  • TNF tumor necrosis factor
  • C5A interleukin-8
  • IL-8 mon
  • the activity of an MEKK protein of the present invention is capable of being stimulated at least 2-fold over basal levels (i.e., levels found in nature when not stimulated), more preferably at least about 4-fold over basal levels and even more preferably at least about 6-fold over basal levels, when a cell producing the MEKK protein is contacted with EGF under the conditions described in related U.S. patent application Ser. No. 08/440,421, entitled “METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • an MEKK protein of the present invention is capable of being stimulated at least 1-fold over basal levels, more preferably at least about 2-fold over basal levels and even more preferably at least about 3-fold over basal levels by NGF stimulation, when a cell producing the.
  • MEKK protein is contacted with NGF under the conditions described in related U.S. patent application Ser. No. 08/440,421, entitled “METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • an MEKK protein of the present invention is capable of being stimulated at least 0.5-fold over basal levels, more preferably at least about 1-fold over basal levels and even more preferably at least about 2-fold over 5 basal levels by TPA stimulation when a cell producing the MEKK protein is contacted with TPA under the conditions described in related U.S. patent application Ser. No. 08/440,421, entitled “METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • TNF is capable of regulating cell death and other functions in different cell types.
  • the present inventor discovered that MEKK stimulation by TNF is independent of Raf.
  • an MEKK protein can be directly stimulated by ultraviolet light (UV) damage of cells while a Raf-dependent pathway cannot. Therefore, both TNF and UV stimulate MEKK activity without substantially activating Raf. In addition, both UV and TNF activation of MEKK is Ras dependent.
  • UV ultraviolet light
  • an MEKK protein of the present invention is capable of regulating the apoptosis of a cell, an ability not shared by Raf protein.
  • apoptosis refers to the form of cell death that comprises: progressive contraction of cell volume with the preservation of the integrity of cytoplasmic organelles; condensation of chromatin, as viewed by light or electron microscopy; and DNA cleavage, as determined by centrifuged sedimentation assays. Cell death occurs when the membrane integrity of the cell is lost and cell lysis occurs. Apoptosis differs from necrosis in which cells swell and eventually rupture.
  • a preferred MEKK protein of the present invention is capable of inducing the apoptosis of cells, such that the cells have characteristics substantially similar to cytoplasmic shrinkage and/or nuclear condensation as described in related U.S. patent application Ser. No. 08/440,421, entitled “METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS,” filed May 15, 1995.
  • Cells were microinjected with expression plasmids encoding MEKK protein. Injected cells were identified using anti- ⁇ -Gal antibody and the DNA of the cells were stained with propidium iodide. Cytoplasmic organization was monitored using an anti-tubulin antibody. The cells were then imaged by differential fluorescent imaging microscopy using techniques standard in the art. The cells demonstrated apoptosis by displaying a morphology having cytoplasmic shrinkage and nuclear condensation.
  • An MEKK protein of the present invention is capable of regulating the activity of JEK protein, JNK protein, Jun protein and/or ATF-2 protein, and Myc protein, such regulation being substantially, if not entirely, independent of Raf protein.
  • Such Raf-independent regulation can regulate the growth characteristics of a cell, including the apoptosis of a cell.
  • an MEKK protein of the present invention is capable of regulating the activity of MEK protein, which is also capable of being regulated by Raf protein.
  • an MEKK protein of the present invention is capable of regulating the activity of MAPK protein and members of the Ets family of transcription factors, such as TCF protein, also referred to as Elk-1 protein.
  • An MEKK protein of the present invention is capable of being activated by a variety of growth factors capable of activating Ras protein.
  • an MEKK protein is capable of activating JNK protein which is also activated by Ras protein, but is not activated by Raf protein.
  • an MEKK protein of the present invention comprises a protein kinase at a divergence point in a signal transduction pathway initiated by different cell surface receptors.
  • An MEKK protein is also capable of being regulated by TNF protein independent of Raf, thereby indicating an association of MEKK protein to a novel signal transduction pathway which is independent of Ras protein and Raf protein.
  • an MEKK protein is capable of performing numerous unique functions independent of or by-passing Raf protein in one or more signal transduction pathways.
  • An MEKK protein is capable of regulating the activity of MEK and/or JEK activity.
  • an MEKK protein is capable of regulating the activity of members of a signal transduction pathway that does not substantially include Raf activity.
  • Such members include, but are not limited to, JNK, Jun, ATF and Myc protein.
  • an MEKK protein is capable of regulating the members of a signal transduction pathway that does involve Raf, such members including, but are not limited to, MEK, MAPK and TCF.
  • An MEKK protein of the present invention is thus capable of regulating the apoptosis of a cell independent of significant involvement by Raf protein.
  • an MEKK protein of the present invention comprises numerous unique structural characteristics.
  • an MEKK protein of the present invention includes at least one of two different structural domains having particular functional characteristics.
  • Such structural domains include an NH 2 -terminal regulatory domain that serves to regulate a second structural domain comprising a COOH-terminal protein kinase catalytic domain that is capable of phosphorylating an MEK protein and/or JEK protein.
  • an MEKK protein c,f the present invention includes a full-length MEKK protein, as well as at least a portion of an MEKK protein capable of performing at least one of the functions defined above.
  • the phrase "at least a portion of an MEKK protein” refers to a portion of an MEKK protein encoded by a nucleic acid molecule that is capable of hybridizing, under stringent conditions, with a nucleic acid encoding a full-length MEKK protein of the present invention.
  • Preferred portions of MEKK proteins are useful for regulating apoptosis in a cell. Additional preferred portions have activities useful for regulating MEKK kinase activity. Suitable sizes for portions of an MEKK protein of the present invention are as disclosed for MEKK protein homologues of the present invention.
  • an MEKK protein of the present invention includes at least a portion of an MEKK protein having molecular weights ranging from about 70 kD to about 250 kD as determined by Tris-glycine SDS-PAGE, preferably using an 8% polyacrylamide SDS gel (SDS-PAGE) and resolved using methods standard in the art.
  • a preferred MEKK protein has a molecular weight ranging from about 75 kD to about 225 kD and even more preferably from about 80 kD to about 200 kD.
  • an MEKK protein of the present invention comprises at least a portion of an MEKK protein encoded by an MRNA (messenger ribonucleic acid) ranging from about 3.5 kb to about 12.0 kb, more preferably ranging from about 4.0 kb to about 11.0 kb, and even more preferably ranging from about 4.5 kb to about 10.0 kb.
  • MRNA messenger ribonucleic acid
  • Particularly preferred MEKK proteins comprise at least a portion of an MEKK protein encoded by an mRNA having a size ranging from about 4.5 kb to about 5.0 kb, a size ranging from about 6.0 kb to about 6.5 ki, a size of about 7.0 kb, or a size ranging from about 8.0 kb to about 10.0 kb.
  • an NH 2 -terminal regulatory domain of the present invention includes an NH 2 -terminal comprising about 400 amino acids having at least about 10% serine and/or threonine residues, more preferably about 400 amino acids having at least about 15% serine and/or threonine residues, and even more preferably about 400 amino acids having at least about 20% serine and/or threonine residues.
  • a preferred an NH 2 -terminal regulatory domain of the present invention includes an NH 2 -terminal comprising about 360 amino acids having at least about 10% serine and/or threonine residues, more preferably about 360 amino acids having at least about 15% serine and/or threonine residues, and even more preferably about 360 amino acids having at least about 20% serine and/or threonine residues.
  • Another preferred an NH 2 -terminal regulatory domain of the present invention includes an NH 2 -terminal comprising about 370 amino acids having at least about 10% serine and/or threonine residues, more preferably about 370 amino acids having at least about 15% serine and/or threonine residues, and even more preferably about 370 amino acids having at least about 20% serine and/or threonine residues.
  • an MEKK protein of the present invention is devoid of SH2 and SH3 domains.
  • an MEKK protein of the present invention includes at least a portion of an MEKK protein homologue preferably having at least about 50%, more preferably at least about 75%, and even more preferably at least about 85% amino acid homology (identity within comparable regions) with the kinase catalytic domain of a naturally occurring MEKK protein.
  • Another MEKK protein of the present invention also includes at least a portion of an MEKK homologue of the present invention has at least about 10%, more preferably at least about 20%, and even more preferably at least about 30% amino acid homology with the NH 2 -terminal regulatory domain of an MEKK protein of a naturally occurring MEKK protein.
  • the sequences comprising the catalytic domain of an MEKK protein are involved in phosphotransferase activity, and therefore display a relatively conserved amino acid sequence.
  • the NH 2 -terminal regulatory domain of an MEKK protein can be substantially divergent.
  • the lack of significant homology between MEKK protein NH 2 -terminal regulatory domains is related to the regulation of each of such domains by different upstream regulatory proteins.
  • an MEKK protein can be regulated by the protein Ras, while others can be regulated independent of Ras.
  • some MEKK proteins can be regulated by the growth factor TNF ⁇ , while others cannot.
  • the NH 2 -terminal regulatory domain of an MEKK protein provides selectivity for upstream signal transduction regulation, while the catalytic domain provides for MEKK substrate selectivity function.
  • a preferred MEKK homologue has at least about 50%, more preferably at least about 75% and even more preferably at least about 85% amino acid homology with the kinase catalytic domain of an MEKK protein having an amino acid sequence as shown in sequence identification numbers disclosed in U.S. Pat. No. 5,405,941, PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421. Such sequence listings are incorporated herein by this reference in their entirety.
  • Another preferred MEKK homologue has at least about 10%, more preferably at least about 20% and even more preferably at least about 30% amino acid homology with the NH 2 -terminal regulatory domain of an MEKK protein having the amino acid sequence shown in the sequence listings incorporated by reference herein.
  • an MEKK protein of the present invention includes at least a portion of an MEKK protein homologue of the present invention that is encoded by a nucleic acid molecule having at least about 50%, more preferably at least about 75%, and even more preferably at least about 85% homology with a nucleic acid molecule encoding the kinase catalytic domain of an MEKK protein.
  • Another preferred MEKK protein homologue is encoded by a nucleic acid molecule having at least about 10%, more preferably at least about 20%, and even more preferably at least about 30% homology with a nucleic acid molecule encoding the NH2-terminal regulatory domain of an MEKK protein.
  • Still another preferred MEKK homologue is encoded by a nucleic acid molecule having at least about 50%, more preferably at least about 75% and even more preferably at least about 85% amino acid homology with the kinase catalytic domain of an MEKK protein encoded by the nucleic acid sequence shown in the sequence listings incorporated by reference herein.
  • An MEKK homologue also includes those encoded by a nucleic acid molecule having at least about 10%, more preferably at least about 20% and even more preferably at least about 30% amino acid homology with the NH 2 -terminal regulatory domain of an MEKK protein encoded by the nucleic acid sequence shown in the sequence listings incorporated by reference herein.
  • nucleic acid and amino acid sequencing technology is not entirely error-free, the foregoing sequences, at best, represent apparent nucleic acid and amino acid sequences of an MEKK protein of the present invention.
  • an MEKK protein of the present invention can include MEKK proteins that have undergone post-translational modification.
  • modification can include, for example, glycosylation (e.g., including addition of N-linked and/or 0-linked oligosaccharides) or post-translational conformational changes or post-translational deletions.
  • an isolated nucleic acid molecule capable of hybridizing, under stringent conditions, with an MEKK protein gene encoding an MEKK protein of the present invention.
  • an isolated nucleic acid molecule is a nucleic acid molecule that has been removed from its natural milieu (i.e., that has been subject to human manipulation). As such, “isolated” does not reflect the extent to which the nucleic acid molecule has been purified.
  • An isolated nucleic acid molecule can include DNA, RNA, or derivatives of either DNA or RNA.
  • An isolated nucleic acid molecule of the present invention can be obtained from its natural source either as an entire (i.e., complete) gene or a portion thereof capable of forming a stable hybrid with that gene.
  • the phrase "at least a portion of" an entity refers to an amount of the entity that is at least sufficient to have the functional aspects of that entity.
  • at least a portion of a nucleic acid sequence is an amount of a nucleic acid sequence capable of forming a stable hybrid with a particular desired gene (e.g., MEKK genes) under stringent hybridization conditions.
  • An isolated nucleic acid is an amount of a nucleic acid sequence capable of forming a stable hybrid with a particular desired gene (e.g., MEKK genes) under stringent hybridization conditions.
  • Isolated MEKK protein nucleic acid molecules include natural nucleic acid molecules and homologues thereof, including, but not limited to, natural allelic variants and modified nucleic acid molecules in which nucleotides have been inserted, deleted, substituted, and/or inverted in such a manner that such modifications do not substantially interfere with the nucleic acid molecule's ability to encode an MEKK protein of the present invention or to form stable hybrids under stringent conditions with natural nucleic acid molecule isolates of MEKK.
  • Preferred modifications to an MEKK protein nucleic acid molecule of the present invention include truncating a full-length MEKK protein nucleic acid molecule by, for example: deleting at least a portion of an MEKK protein nucleic acid molecule encoding a regulatory domain to produce a constitutively active MEKK protein; deleting at least a portion of an MEKK protein nucleic acid molecule encoding a catalytic domain to produce an inactive MEKK protein; and modifying the MEKK protein to achieve desired inactivation and/or stimulation of the protein, for example, substituting a codon encoding a lysine residue in the catalytic domain (i.e., phosphotransferase domain) with a methionine residue to inactivate the catalytic domain.
  • a codon encoding a lysine residue in the catalytic domain i.e., phosphotransferase domain
  • a preferred truncated MEKK nucleic acid molecule encodes a form of an MEKK protein containing a catalytic domain but that lacks a regulatory domain.
  • Preferred catalytic domain truncated MEKK nucleic acid molecules encode particular residues as disclosed in sequence identification numbers disclosed in U.S. Pat. No. 5,405,941, PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421.
  • Another preferred truncated MEKK nucleic acid molecule encodes a form of an MEKK protein comprising an NH 2 -terminal regulatory domain a catalytic domain but lacking a catalytic domain.
  • Preferred regulatory domain truncated MEKK nucleic acid molecules encode particular residues as disclosed in sequence identification numbers disclosed in U.S. Pat. No. 5,405,941, PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421.
  • An isolated nucleic acid molecule of the present invention can include a nucleic acid sequence that encodes at least one MEKK protein of the present invention, examples of such proteins being disclosed herein.
  • nucleic acid molecule primarily refers to the physical nucleic acid molecule and the phrase “nucleic acid sequence” primarily refers to the sequence of nucleotides that comprise the nucleic acid molecule, the two phrases can be used interchangeably.
  • MEKK proteins of the present invention include, but are not limited to, proteins having full-length MEKK protein coding regions, portions thereof, and other MEKK protein homologues.
  • an MEKK protein gene includes all nucleic acid sequences related to a natural MEKK protein gene such as regulatory regions that control production of an MEKK protein encoded by that gene (including, but not limited to, transcription, translation or post-translation control regions) as well as the coding region itself.
  • a nucleic acid molecule of the present invention can be an isolated natural MEKK protein nucleic acid molecule or a homologue thereof.
  • a nucleic acid molecule of the present invention can include one or more regulatory regions, full-length or partial coding regions, or combinations thereof.
  • the minimal size of an MEEK protein nucleic acid molecule of the present invention is the minimal size capable of forming a stable hybrid under stringent hybridization conditions with a corresponding natural gene.
  • An MEKK protein nucleic acid molecule homologue can be produced using a number of methods known to those skilled in the art (see, e.g., Sambrook et al., ibid.).
  • ucleic acid molecules can be modified using a variety of techniques including, but not limited to, classic mutagenesis techniques and recombinant DNA techniques, such as site-directed mutagenesis, chemical treatment of a nucleic acid molecule to induce mutations, restriction enzyme cleavage of a nucleic acid fragment, ligation of nucleic acid fragments, polymerase chain reaction (PCR) amplification and/or mutagenesis of selected regions of a nucleic acid sequence, synthesis of oligonucleotide mixtures and ligation of mixture groups to "build" a mixture of nucleic acid molecules and combinations thereof.
  • classic mutagenesis techniques and recombinant DNA techniques such as site-directed mutagenesis
  • chemical treatment of a nucleic acid molecule to induce mutations
  • Nucleic acid molecule homologues can be selected from a mixture of modified nucleic acids by screening for the function of the protein encoded by the nucleic acid (e.g., the ability of a homologue to phosphorylate MEK protein or JEK protein) and/or by hybridization with isolated MEEK protein nucleic acids under stringent conditions.
  • One embodiment of the present invention is an MEKK protein nucleic acid molecule capable of encoding at least a portion of an MEKK protein, or a homologue thereof, as described herein.
  • a preferred nucleic acid molecule of the present invention includes, but is not limited to, a nucleic acid molecule that encodes a protein having at least a portion of an amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
  • a preferred nucleic acid molecule of the present invention is capable of hybridizing under stringent conditions to a nucleic acid that encodes at least a portion of an MEKK protein, or a homologue thereof.
  • an MEKK protein nucleic acid molecule that includes a nucleic acid sequence having at least about 50%, preferably at least about 75%, and more preferably at least about 85% homology with the corresponding region(s) of the nucleic acid sequence encoding the catalytic domain of an MEKK protein, or a homologue thereof.
  • an MEKK protein nucleic acid molecule that includes a nucleic acid sequence having at least about 20%, preferably at least about 30%, and more preferably at least about 40% homology with the corresponding region(s) of the nucleic acid sequence encoding the NH 2 -terminal regulatory domain of an MEKK protein, or a homologue thereof.
  • a particularly preferred nucleic acid sequence is a nucleic acid sequence having at least about 50%, preferably at least about 75%, and more preferably at least about 85% homology with a nucleic acid sequence encoding the catalytic domain of an amino acid sequence shown in the sequence listings incorporated by reference herein.
  • nucleic acid sequence is a nucleic acid sequence having at least about 20%, preferably at least about 30%, and more preferably at least about 40% homology with a nucleic acid sequence encoding the NH 2 -terminal regulatory domain of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
  • nucleic acid molecules can be a full-length gene and/or a nucleic acid molecule encoding a full-length protein, a hybrid protein, a fusion protein, a multivalent protein or a truncation fragment. More preferred nucleic acid molecules of the present invention comprise isolated nucleic acid molecules having the nucleic acid sequence shown in the sequence listings incorporated by reference herein.
  • nucleic acid molecule of an MEKK protein of the present invention allows one skilled in the art to make copies of that nucleic acid molecule as well as to obtain additional portions of MEKK protein-encoding genes (e.g., nucleic acid molecules that include the translation start site and/or transcription and/or translation control regions), and/or MEKK protein nucleic acid molecule homologues. Knowing a portion of an amino acid sequence of an MEKK protein of the present invention allows one skilled in the art to clone nucleic acid sequences encoding such an MEKK protein.
  • the present invention also includes nucleic acid molecules that are oligonucleotides capable of hybridizing, under stringent conditions, with complementary regions of other, preferably longer, nucleic acid molecules of the present invention that encode at least a portion of an MEKK protein, or a homologue thereof.
  • a preferred oligonucleotide is capable of hybridizing, under stringent conditions, with a nucleic acid molecule that is capable of encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
  • a more preferred oligonucleotide is capable of hybridizing to a nucleic acid molecule having the nucleic acid sequence shown in the sequence listings incorporated by reference herein, or complements thereof.
  • Oligonucleotides of the present invention can be RNA, DNA, or derivatives of either.
  • the minimal size of such oligonucleotides is the size required to form a stable hybrid between a given oligonucleotide and the complementary sequence on another nucleic acid molecule of the present invention Minimal size characteristics are disclosed herein.
  • the size of the oligonucleotide must also be sufficient for the use of the oligonucleotide in accordance with the present invention.
  • oligonucleotides of the present invention can be used in a variety of applications including, but not limited to, as probes to identify additional nucleic acid molecules, as primers to amplify or extend nucleic acid molecules or in therapeutic applications to inhibit, for example, expression of MEKK proteins by cells.
  • Such therapeutic applications include the use of such oligonucleotides in, for example, antisense-, triplex formation-, ribozyme- and/or RNA drug- based technologies.
  • the present invention therefore, includes use of such oligonucleotides and methods to interfere with the production of MEKK proteins.
  • an isolated MEKK protein of the present invention is produced by culturing a cell capable of expressing the protein under conditions effective to produce the protein, and recovering the protein.
  • a preferred cell to culture is a recombinant cell that is capable of expressing the MEKK protein, the recombinant cell being produced by transforming a host cell with one or more nucleic acid molecules of the present invention. Transformation of a nucleic acid molecule into a cell can be accomplished by any method by which a nucleic acid molecule can be inserted into the cell. Transformation techniques include, but are not limited to, transfection, electroporation, microinjection, lipofection, adsorption, and protoplast fusion.
  • a recombinant cell may remain unicellular or may grow into a tissue, organ or a multicellular organism.
  • Transformed nucleic acid molecules of the present invention can remain extrachromosomal or can integrate into one or more sites within a chromosome of the transformed (i.e., recombinant) cell in such a manner that their ability to be expressed is retained.
  • the present invention also includes a recombinant vector which includes at least one MEKK protein nucleic acid molecule of the present invention inserted into any vector capable of delivering the nucleic acid molecule into a host cell.
  • a vector contains heterologous nucleic acid sequences, for example nucleic acid sequences that are not naturally found adjacent to MEKK protein nucleic acid molecules of the present invention.
  • the vector can be either RNA or DNA, and either prokaryotic or eukaryotic, and is typically a virus or a plasmid.
  • Recombinant vectors can be used in the cloning, sequencing, and/or otherwise manipulating of MEKK protein nucleic acid molecules of the present invention.
  • recombinant vector herein referred to as a recombinant molecule and described in more detail below, can be used in the expression of nucleic acid molecules of the present. invention.
  • Preferred recombinant vectors are capable of replicating in the transformed cell.
  • Preferred nucleic acid molecules to insert into a recombinant vector includes a nucleic acid molecule that. encodes at least a portion of an MEKK protein, or a homologue thereof.
  • a more preferred nucleic acid molecule to insert into a recombinant vector includes a nucleic acid molecule encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
  • An even more preferred nucleic acid molecule to insert into a recombinant vector includes the nucleic acid molecule shown in the sequence listings incorporated by reference herien, or complements thereof.
  • Suitable host cells for transforming a cell can include any cell capable of producing MEKK proteins of the present invention after being transformed with at least one nucleic acid molecule of the present invention.
  • Host cells can be either untransformed cells or cells that are already transformed with at least one nucleic acid molecule.
  • Suitable host cells of the present invention can include bacterial, fungal (including yeast), insect, animal and plant cells.
  • Preferred host cells include bacterial, yeast, insect and mammalian cells, with mammalian cells being particularly preferred.
  • a recombinant cell is preferably produced by transforming a host cell with one or more recombinant molecules, each comprising one or more nucleic acid molecules of the present invention operatively linked to an expression vector containing one or more transcription control sequences.
  • the phrase operatively linked refers to insertion of a nucleic acid molecule into an expression vector in a manner such that the molecule is able to be expressed when transformed into a host cell.
  • an expression vector is a DNA or RNA vector that is capable of transforming a host cell and of effecting expression of a specified nucleic acid molecule.
  • the expression vector is also capable of replicating within the host cell.
  • Expression vectors can be either prokaryotic or eukaryotic, and are typically viruses or plasmids.
  • Expression vectors of the present invention include any vectors that function (i.e., direct gene expression) in recombinant cells of the present invention, including in bacterial, fungal, insect, animal, and/or plant cells.
  • nucleic acid molecules of the present invention can be operatively linked to expression vectors containing regulatory sequences such as promoters, operators, repressors, enhancers, termination sequences, origins of replication, and other regulatory sequences that are compatible with the recombinant cell and that control the expression of nucleic acid molecules of the present invention.
  • a transcription control sequence includes a sequence which is capable of controlling the initiation, elongation, and termination of transcription. Particularly important transcription control sequences are those which control transcription initiation, such as promoter, enhancer, operator and repressor sequences. Suitable transcription control sequences include any transcription control sequence that can function in at least one of the recombinant cells of the present invention. A variety of such transcription control sequences are known to those skilled in the art.
  • Preferred transcription control sequences include those which function in bacterial, yeast, and mammalian cells, such as, but not limited to, tac, lac, trp, trc, oxy-pro, omp/lpp, rrnB, bacteriophage lambda ( ⁇ ) (such as ⁇ P L and ⁇ P R and fusions that include such promoters), bacteriophage T7, T7lac, bacteriophage T3, bacteriophage SP6, bacteriophage SPO1, metallothionein, alpha mating factor, baculovirus, vaccinia virus, herpesvirus, poxvirus, adenovirus, simian virus 40, retrovirus actin, retroviral long terminal repeat, Rous sarcoma virus, heat shock, phosphate and nitrate transcription control sequences, as well as other sequences capable of controlling gene expression in prokaryotic or eukaryotic cells.
  • bacteriophage lambda ⁇
  • transcription control sequences include tissue-specific promoters and enhancers as well as lymphokine-inducible promoters (e.g., promoters inducible by interferons or interleukins).
  • Transcription control sequences of the present invention can also include naturally occurring transcription control sequences naturally associated with a DNA sequence encoding an MEKK protein.
  • Preferred nucleic acid molecules for insertion into an expression vector include nucleic acid molecules that encode at least a portion of an MEKK protein, or a homologue thereof.
  • a more preferred nucleic acid molecule for insertion into an expression vector includes a nucleic acid molecule encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
  • Expression vectors of the present invention may also contain fusion sequences which lead to the expression of inserted nucleic acid molecules of the present invention as fusion proteins.
  • Inclusion of a fusion sequence as part of an MEKK nucleic acid molecule of the present invention can enhance the stability during production, storage and/or use of the protein encoded by the nucleic acid molecule.
  • a fusion segment can function as a tool to simplify purification of an MEKK protein, such as to enable purification of the resultant fusion protein using affinity chromatography.
  • a suitable fusion segment can be a domain of any size that has the desired function (e.g., increased stability and/or purification tool). It is within the scope of the present invention to use one or more fusion segments.
  • Fusion segments can be joined to amino and/or carboxyl termini of an MEKK protein.
  • Linkages between fusion segments and MEKK proteins can be constructed to be susceptible to cleavage to enable straight-forward recovery of the MEKK proteins.
  • Fusion proteins are preferably produced by culturing a recombinant cell transformed with a fusion nucleic acid sequence that encodes a protein including the fusion segment attached tc either the carboxyl and/or amino terminal end of an MEKK protein.
  • a recombinant cell of the present invention includes any cells transformed with at least one of any nucleic acid molecule of the present invention.
  • a preferred recombinant cell is a cell transformed with at least one nucleic acid molecule that encodes at least a portion of an MEKK protein, or a homologue thereof.
  • a more preferred recombinant cell is transformed with at least one nucleic acid molecule that is capable of encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
  • An even more preferred recombinant cell is transformed with at least one nucleic acid molecule shown in the sequence listings incorporated by reference herein, or complements thereof.
  • Particularly preferred recombinant cells include mammalian cells involved in a disease transformed with at least one of the aforementioned nucleic acid molecules. Methods to improve expression of transformed nucleic acid molecules are disclosed in U.S. Pat. No. 5,405,941, which is incorporated herein by this reference.
  • amplifying the copy number of a nucleic acid sequence in a cell can be accomplished either by increasing the copy number of the nucleic acid sequence in the cell's genome or by introducing additional copies of the nucleic acid sequence into the cell by transformation. Copy number amplification is conducted in a manner such that greater amounts of enzyme are produced, leading to enhanced conversion of substrate to product.
  • recombinant molecules containing nucleic acids of the present invention can be transformed into cells to enhance enzyme synthesis. Transformation can be accomplished using any process by which nucleic acid sequences are inserted into a cell. Prior to transformation, the nucleic acid sequence on the recombinant molecule can be manipulated to encode an enzyme having a higher specific activity.
  • recombinant cells can be used to produce an MEKK protein of the present invention by culturing such cells under conditions effective to produce such a protein, and recovering the protein.
  • Effective conditions to produce a protein include, but are not limited to, appropriate media, bioreactor, temperature, pH and oxygen conditions that permit protein production.
  • An appropriate, or effective, medium refers to any medium in which a cell of the present invention, when cultured, is capable of producing an MEKK protein.
  • Such a medium is typically an aqueous medium comprising assimilable carbohydrate, nitrogen and phosphate sources, as well as appropriate salts, minerals, metals and other nutrients, such as vitamins.
  • the medium may comprise complex nutrients or may be a defined minimal medium.
  • Cells of the present invention can be cultured in conventional fermentation bioreactors, which include, but are. not limited to, batch, fed-batch, cell recycle, and continuous fermentors. Culturing can also be conducted in shake flasks, test tubes, microtiter dishes, and petri plates. Culturing is carried out at a temperature, pH and oxygen content appropriate for the recombinant cell. Such culturing conditions are well within the expertise of one of ordinary skill in the art.
  • resultant MEKK proteins may either remain within the recombinant cell or be secreted into the fermentation medium.
  • the phrase "recovering the protein” refers simply to collecting the whole fermentation medium containing the protein and need not imply additional steps of separation or purification.
  • MEKK proteins of the present invention can be purified using a variety of standard protein purification techniques, such as, but not limited to, affinity chromatography, ion exchange chromatography, filtration, electrophoresis, hydrophobic interaction chromatography, gel filtration chromatography, reverse phase chromatography, chromatofocusing and differential solubilization.
  • an MEKK protein of the present invention can be produced by isolating the MEKK protein from cells expressing the MEKK protein recovered from an animal.
  • a cell type such as T cells
  • MEKK protein can then be isolated from the isolated T cells using standard techniques described herein.
  • the present invention also includes a method to identify compounds capable of regulating signals initiated from a receptor on the surface of a cell, such signal regulation involving in some respect, MEKK protein.
  • a method comprises the steps of: (a) contacting a cell containing an MEKK protein with a putative regulatory compound; (b) contacting the cell with a ligand capable of binding to a receptor on the surface of the cell; and (c) assessing the ability of the putative regulatory compound to regulate cellular signals by determining activation of a member of an MEKK-dependent pathway of the present invention.
  • a preferred method to perform step (c) comprises measuring the phosphorylation of a member of an MEKK-dependent pathway.
  • step (c) comprises measuring the ability of the MEKK protein to phosphorylate a substrate molecule comprising a protein including JEK, MEK1, MEK2, JNKK1, JNKK2, Raf-1, Ras-GAP and neurofibromin using methods described herein.
  • Preferred substrates include JEK, MEK1, MEK2, JNKK1 and JNKK2.
  • Yet another preferred method to perform step (c) comprises determining the ability of MEKK protein to bind to Ras protein. In particular, determining the ability of MEKK protein to bind to GST-Ras V12 (GTP ⁇ S).
  • Putative compounds as referred to herein include, for example, compounds that are products of rational drug design, natural products and compounds having partially defined signal transduction regulatory properties.
  • a putative compound can be a protein-based compound, a carbohydrate-based compound, a lipid-based compound, a nucleic acid-based compound, a natural organic compound, a synthetically derived organic compound, an anti-idiotypic antibody and/or catalytic antibody, or fragments thereof.
  • a putative regulatory compound can be obtained, for example, from libraries of natural or synthetic compounds, in particular from chemical or combinatorial libraries (i.e., libraries of compounds that differ in sequence or size but that have the same building blocks; see for example, U.S. Pat. Nos. 5,010,175 and 5,266,684 of Rutter and Santi) or by rational drug design.
  • a method to identify compounds capable of regulating signal transduction in a cell can comprise the steps of: (a) contacting a putative inhibitory compound with an MEKK protein to form a reaction mixture; (b) contacting the reaction mixture with MEK protein; and (c) assessing the ability of the putative inhibitory compound to inhibit phosphorylation of the NEK protein by the MEKK protein.
  • the results obtained from step (c) can be compared with the ability of a putative inhibitory compound to inhibit the ability of Raf protein to phosphorylate MEK protein, to determine if the compound can selectively regulate signal transduction involving MEKK protein independent of Raf protein.
  • MEKK, MEK and Raf proteins used in the foregoing methods can be recombinant proteins or naturally-derived proteins.
  • a method to identify compounds capable of regulating signal transduction in a cell can comprise the steps of: (a) contacting a putative inhibitory compound with either an MEKK protein or a Ras protein, or functional equivalents thereof, to form a first reaction mixture; (b) combining the first reaction mixture with either Ras protein (or a functional equivalent thereof) if MEKK protein was used in the first reaction mixture, or MEKK protein (or a functional equivalent thereof) if Raf protein if MEKK protein was added to the first reaction mixture; and (c) assessing the ability of the putative inhibitory compound to inhibit the binding of the Ras protein to the MEKK protein.
  • the lack of binding of the MEKK protein to the Ras protein indicates that the putative inhibitory compound is effective at inhibiting binding between MEKK and Ras.
  • MEKK and Ras proteins used in the foregoing method can be recombinant proteins or naturally-derived proteins.
  • Preferred Ras protein for use with the foregoing method includes, but is not limited to, GST-Ras V12 (GTP ⁇ S).
  • Preferred MEKK protein for use with the method includes recombinant MEKK protein. More preferred MEKK protein includes at least a portion of an MEKK protein having the kinase domain of MEKK. Even more preferred MEKK protein includes a protein encoded by p-MEKK1, MEKK COOH and/or MEKK COOH -His (as described in U.S. patent application Ser. No. 08/440,421.
  • the inhibition of binding of MEKK protein to Ras protein can be determined using a variety of methods known in the art. For example, immunoprecipitation assays can be performed to determine if MEKK and Ras co-precipitate. In addition, immunoblot assays can be performed to determine if MEKK and Ras co-migrate when resolved by gel electrophoresis.
  • Another method to determine binding of MEKK to Ras comprises combining a substrate capable of being phosphorylated by MEKK protein with the Ras protein of the reaction mixture of step (b). In this method, Ras protein is separated from the reaction mixture of step (b) following incubation with MEKK protein. If MEKK protein is able to bind to the Ras, then the bound MEKK will be co-isolated with the Ras protein.
  • the substrate is then added to the isolated Ras protein. Any co-isolated MEKK protein will phosphorylate the substrate. Thus, inhibition of binding between MEKK and Ras can be measured by determining the extent of phosphorylation of the substrate upon combination with the isolated Ras protein. The extent of phosphorylation can be determined using a variety of methods known in the art, including kinase assays using ⁇ 32 P!ATP.
  • kits to identify compounds capable of regulating signals initiated from a receptor on the surface of a cell, such signals involving in some respect, MEKK protein.
  • kits include: (a) at least one cell containing NEKK protein; (b) a ligand capable of binding to a receptor on the surface of the cell; and (c) a means for assessing the ability of a putative regulatory compound to alter phosphorylation of the MEKK protein.
  • a means for detecting phosphorylation include methods and reagents known to those of skill in the art, for example, phosphorylation can be detected using antibodies specific for phosphorylated amino acid residues, such as tyrosine, serine and threonine.
  • a kit one is, capable of determining, with a fair degree of specificity, the location along a signal transduction pathway of particular pathway constituents, as well as the identity of the constituents involved in such pathway, at or near the site of regulation.
  • a kit of the present invention can includes: (a) MEKK protein; (b) MEK protein; and (c) a means for assessing the ability of a putative inhibitory compound to inhibit phosphorylation of the MEK protein by the MEKK protein.
  • a kit of the present invention can further comprise Raf protein and a means for detecting the ability of a putative inhibitory compound to inhibit the ability of Raf protein to phosphorylate the MEK protein.
  • Another aspect of the present invention relates to the treatment of an animal having a medical disorder that is subject to regulation or cure by manipulating a signal transduction pathway in a cell involved in the disorder.
  • medical disorders include disorders which result from abnormal cellular growth or abnormal production of secreted cellular products.
  • medical disorders include, but are not limited to, cancer, autoimmune disease, inflammatory responses, allergic responses and neuronal disorders, such as Parkinson's disease and Alzheimer's disease.
  • Preferred cancers subject to treatment using a method of the present invention include, but are not limited to, small cell carcinomas, non-small cell lung carcinomas with overexpressed.
  • the term treatment can refer to the regulation of the progression of a medical disorder or the complete removal of a medical disorder (e.g., cure).
  • Treatment of a medical disorder can comprise regulating the signal transduction activity of a cell in such a manner that a cell involved in the medical disorder no longer responds to extracellular stimuli (e.g., growth factors or cytokines), or the killing of a cell involved in the medical disorder through cellular apoptosis.
  • an MEKK protein of the present invention is capable of regulating the homeostasis of a cell by regulating cellular activity such as cell growth cell death, and cell function (e.g., secretion of cellular products).
  • Such regulation in most cases, is independent of Raf, however, as discussed above, some pathways capable of regulation by MEKK protein may be subject to upstream regulation by Raf protein. Therefore, it is within the scope of the present invention to either stimulate or inhibit the activity of Raf protein and/or MEKK protein to achieve desired regulatory results. Without being bound by theory, it is believed that the regulation of Raf protein and MEKK protein activity at the divergence point from Ras protein can be controlled by a "2-hit" mechanism.
  • a first "hit” can comprise any means of stimulating Ras protein, thereby stimulating a Ras-dependent pathway, including, for example, contacting a cell with a growth factor which is capable of binding to a cell surface receptor in such a manner that Ras protein is activated.
  • a second "hit” can be delivered that is capable of increasing the activity of JNK activity compared with MAPK activity, or vice versa.
  • a second "hit” can include, but is not limited to, regulation of JNK or MAPK activity by compounds capable of stimulating or inhibiting the activity of MEKK, JEK, Raf and/or MEK.
  • compounds such as protein kinase C or phospholipase C kinase, can provide the second "hit" needed to drive the divergent Ras-dependent pathway down the MEKK-dependent pathway in such a manner that JNK is preferentially activated over MAPK.
  • One embodiment of the present invention comprises a method for regulating the homeostasis of a cell comprising regulating the activity of an MEKK-dependent pathway relative to the activity of a Raf-dependent pathway in the cell.
  • the term "homeostasis” refers to the tendency of a cell to maintain a normal state using intracellular systems such as signal transduction pathways.
  • Regulation of the activity of an MEKK-dependent pathway includes increasing the activity of an MEKK-dependent pathway relative to the activity of a Raf-dependent pathway by regulating the activity of a member of an MEKK-dependent pathway, a member of a Raf-dependent pathway, and combinations thereof, to achieve desired regulation of phosphorylation along a given pathway, and thus effect apoptosis.
  • Preferred regulated members of an MEKK-dependent pathway or a Raf-dependent pathway to regulate include, but are not limited to, proteins including MEKK, Ras, Raf, JEK, MEK, MAPK, JNK, TCF, ATF-2, Jun and Myc, and combinations thereof.
  • the activity of a member of an MEKK-dependent pathway, a member of a Raf-dependent pathway, and combinations thereof are regulated by altering the concentration of such members in a cell.
  • One preferred regulation scheme involves altering the concentration of proteins including MEKK, Ras, Raf, JEK, MEK, MAPK, JNK, TCF, Jun, ATF-2, and Myc, and combinations thereof.
  • a more preferred regulation scheme involves increasing the concentration of proteins including MEKK, Ras, JEK, JNK, Jun, ATF-2, and Myc, and combinations thereof.
  • Another more preferred regulation scheme involves decreasing the concentration of proteins including Raf, MEK, MAPK, and TCF, and combinations thereof. It is also within the scope of the present invention that the regulation of protein concentrations in two or more of the foregoing regulation schemes can be combined to achieve an optimal apoptotic effect in a cell.
  • a preferred method for increasing the concentration of a protein in a regulation scheme of the present invention includes, but is not limited to, increasing the copy number of a nucleic acid sequence encoding such protein within a cell, improving the efficiency with which the nucleic acid sequence encoding such protein is transcribed within a cell, improving the efficiency with which a transcript is translated into such a protein, improving the efficiency of post-translational modification of such protein, contacting cells capable of producing such protein with anti-sense nucleic acid sequences, and combinations thereof.
  • the homeostasis of a cell is controlled by regulating the apoptosis of a cell.
  • a suitable method for regulating the apoptosis of a cell is to regulate the activity of an MEKK- dependent pathway in which the MEKK protein regulates the pathway substantially independent of Raf.
  • a particularly preferred method for regulating the apoptosis of a cell comprises increasing the concentration of MEKK protein by contacting a cell with a nucleic acid molecule encoding an MEKK protein that possesses unregulated kinase activity.
  • a preferred nucleic acid molecule with which to contact a cell includes a nucleic acid molecule encoding the MEKK protein shown in the sequence listings incorporated by reference herein, and combinations thereof.
  • a more preferred nucleic acid molecule with which to contact a cell includes a nucleic acid molecule encoding a truncated MEKK protein having only the kinase catalytic domain (i.e., no regulatory domain) of the MEKK protein shown in the sequence listings incorporated by reference herein.
  • suitable variation of an MEKK protein described herein comprises a protein encoded by a nucleic acid molecule that are able to hybridize to any of the above sequences under stringent conditions.
  • the foregoing method can further comprise the step of decreasing the activity of MEK protein in the cell by contacting the cell with a compound capable of inhibiting MEK activity.
  • a compound capable of inhibiting MEK activity can include: peptides capable of binding to the kinase domain of MEK in such a manner that phosphorylation of MAPK protein by the MEK protein is inhibited; and/or peptides capable of binding to a portion of a MAPK protein in such a manner that phosphorylation of the MAPK protein is inhibited.
  • the activity of a member of an MEKK-dependent pathway, a member of a Raf-dependent pathway, and combinations thereof can be regulated by directly altering the activity of such members in a cell.
  • a preferred method for altering the activity of a member of an MEKK-dependent pathway includes, but is not limited to, contacting a cell with a compound capable of directly interacting with a protein including MEKK, Ras, JEK, JNK, Jun, ATF-2, and Myc, and combinations thereof, in such a manner that the proteins are activated; and/or contacting a cell with a compound capable of directly interacting with a protein including Raf, MEK, MAPK, TCF protein, and combinations thereof in such a manner that the activity of the proteins are inhibited.
  • a preferred compound with which to contact a cell that is capable of regulating a member of an MEKK-dependent pathway includes a peptide capable of binding to the regulatory domain of proteins including MEKK, Ras, JEK, JNK, Jun, ATF-2, and Myc, in which the peptide inhibits the ability of the regulatory domain to regulate the activity of the kinase domains of such proteins.
  • Another preferred compound with which to contact a cell includes TNF ⁇ , growth factors regulating tyrosine kinases, hormones regulating G protein-coupled receptors and FAS ligand.
  • a preferred compound with which to contact a cell that is capable of regulating a member of a Raf-dependent pathway includes a peptide capable of binding to the kinase catalytic domain of a protein selected from the group consisting of Raf, MEK-1, MEK-2, MAPK, and TCF, in which the peptide inhibits the ability of the protein to be phosphorylated or to phosphorylate a substrate.
  • a compound can regulate the activity of a member of an MEKK-dependent pathway by affecting the ability of one member of the pathway to bind to another member of the pathway. Inhibition of binding can be achieved by directly interfering at the binding site of either member, or altering the conformational structure, thereby precluding the binding between one member and another member.
  • a Ras:MEKK binding compound of the present invention comprises an isolated peptide (or mimetope thereof) comprising an amino acid sequence derived from a Ras protein.
  • a Ras:MEKK binding compound of the present invention comprises an isolated peptide (or mimetope thereof) comprising an amino acid sequence derived from an MEKK protein.
  • an isolated, or biologically pure, peptide is a peptide that has been removed from its natural milieu.
  • an isolated compound of the present invention can be obtained from a natural source or produced using recombinant DNA technology or chemical synthesis.
  • an isolated peptide can be a full-length protein or any homolog of such a protein in which amino acids have been deleted (e.g., a truncated version of the protein), inserted, inverted, substituted and/or derivatized (e.g., by glycosylation, phosphorylation, acetylation, myristylation, prenylation, palmitilation, and/or amidation) such that the peptide is capable of regulating the binding of Ras protein to MEKK protein.
  • a “mimetope” refers to any compound that is able to mimic the ability of an isolated compound of the present invention.
  • a mimetope can be a peptide that has been modified to decrease its susceptibility to degradation but that still retain regulatory activity.
  • Other examples of mimetopes include, but are not limited to, protein-based compounds, carbohydrate-based compounds, lipid-based compounds, nucleic acid-based compounds, natural organic compounds, synthetically derived organic compounds, anti-idiotypic antibodies and/or catalytic antibodies, or fragments thereof.
  • a mimetope can be obtained by, for example, screening libraries of natural and synthetic compounds as disclosed herein that are capable of inhibiting the binding of Ras to MEKK.
  • a mimetope can also be obtained by, for example, rational drug design.
  • the three-dimensional structure of a compound of the present invention can be analyzed by, for example, nuclear magnetic resonance (NMR) or x-ray crystallography.
  • NMR nuclear magnetic resonance
  • the three-dimensional structure can then be used to predict structures of potential mimetopes by, for example, computer modelling.
  • the predicted mimetope structures can then be produced by, for example, chemical synthesis, recombinant DNA technology, or by isolating a mimetope from a natural source (e.g., plants, animals, bacteria and fungi).
  • a Ras:MEKK binding compound of the present invention comprises an isolated peptide having a domain of a Ras protein that is capable of binding to an MEKK protein (i.e., that has an amino acid sequence which enables the peptide to be bound by an MEKK protein).
  • a Ras peptide of the present invention is of a size that enables the peptide to be bound by an MEKK protein, preferably, at least about 4 amino acid residues, more preferably at least about 12 amino acid residues, and even more preferably at least about 25 amino acid residues.
  • a Ras peptide of the present invention is capable of being bound by the COOH-terminal region of MEKK, preferably the region of MEKK containing the MEKK kinase domain.
  • a Ras peptide of the present invention comprises the effector domain of Ras and more preferably amino acid residues 17-42 of H-Ras.
  • a Ras:MEKK binding compound of the present invention comprises an isolated MEKK peptide that has a domain of an MEKK protein that is capable of binding to a Ras protein (i.e., that has an amino acid sequence which enables the peptide to be bound by a Ras protein).
  • An MEKK peptide of the present invention is of a size that enables the peptide to be bound by a Ras protein, in particular by the effector domain of a Ras protein.
  • an MEKK peptide of the present invention at least about 320 amino acids in length.
  • an MEKK peptide of the present invention comprises the COOH-terminal region of an MEKK protein and more preferably MEKK COOH (as described in U.S. patent application Ser. No. 08/440,421.
  • Ras is a critical component of tyrosine kinase growth factor receptor and G-protein coupled receptor regulation of signal transduction pathways controlling mitogenesis and differentiation.
  • the protein serine-threonine kinases Raf-1 and MEKK1 are Ras effectors and selectively bind to Ras in a GTP dependent manner.
  • the p110 catalytic subunit of the lipid kinase has also been shown to directly interact with Ras in a GTP dependent manner.
  • Ras-GAP and neurofibromin also regulate Ras GTPase activity.
  • Raf-1, MEKK1 and PI3-kinase are capable of increasing the activity in cells expressing GTPase-deficient Ras consistent with their interaction with Ras-GTP being involved in their regulation.
  • Ras effectors bind to Ras in a GTP dependent manner.
  • the Ras binding domain for Raf-1 is encoded in the extreme NH 2 -terminal regulatory domain of Raf-1.
  • the Ras binding domain is encoded within the catalytic domain of MEKK1. Both Raf-1 and MEKK1 binding to Ras is blocked by a Ras effector domain peptide.
  • Raf-1, MEKK1 and other Ras effectors can compete for interaction with Ras-GTP presumably at the Ras effector domain.
  • the relative abundance and affinity of each Ras effector in different cells may influence the magnitude, onset and duration of each effector response. Secondary inputs, such as phosphorylation of the different Ras effectors, can also influence their interaction with Ras-GTP.
  • Ras effector activation in cells relative to effector affinity for Ras-GTP are predictable based on the foregoing information.
  • MEKKl can preferentially regulate the SEK/Jun kinase pathways relative to MAPK. Activation of the SEK/Jun kinase pathway is generally slower in onset and maintained as maximal activity longer than the activation of MAPK. As additional MEKKs are characterized it will be important to characterize their regulation and interaction with Ras-GTP. Undoubtedly additional Ras effectors will be identified in the near future.
  • the present invention also includes a method to administer isolated compounds of the present invention to a cell to regulate signal transduction activity in the cell.
  • the present invention includes a method to administer an isolated compound of the present invention to a cell to regulate apoptosis of the cell.
  • the present invention also includes a method for regulating the homeostasis of a cell comprising injecting an area of a subject's body with an effective amount of a naked plasmid DNA compound (such as is taught, for example in Wolff et al., 1990, Science 247, 1465-1468).
  • a naked plasmid DNA compound comprises a nucleic acid molecule encoding an MEKK protein of the present invention, operatively linked to a naked plasmid DNA vector capable of being taken up by and expressed in a recipient cell located in the body area.
  • a preferred naked plasmid DNA compound of the present invention comprises a nucleic acid molecule encoding a truncated MEKK protein having deregulated kinase activity.
  • Preferred naked plasmid DNA vectors of the present invention include those known in the art.
  • a naked plasmid DNA compound of the present invention transforms cells within the subject and directs the production of at least a portion of an MEKK protein or RNA nucleic acid molecule that is capable of regulating the apoptosis of the cell.
  • a naked plasmid DNA compound of the present invention is capable of treating a subject suffering from a medical disorder including cancer, autoimmune disease, inflammatory responses, allergic responses and neuronal disorders, such as Parkinson's disease and Alzheimer's disease.
  • a naked plasmid DNA compound can be administered as an anti- tumor therapy by injecting an effective amount of the plasmid directly into a tumor so that the plasmid is taken up and expressed by a tumor cell, thereby killing the tumor cell.
  • an effective amount of a naked plasmid DNA to administer to a subject comprises an amount needed to regulate or cure a medical disorder the naked plasmid DNA is intended to treat, such mode of administration, number of doses and frequency of dose capable of being decided upon, in any given situation, by one of skill in the art without resorting to undue experimentation.
  • One aspect of the present invention relates to the recognition that an MEKK protein is capable of activating MAPK and that MAPK can regulate various cellular functions as disclosed in U.S. Pat. No. 5,405,941, which is incorporated herein by this reference.
  • a therapeutic composition of the present invention can be used to formulate a therapeutic composition.
  • a therapeutic composition of the present invention includes at least one isolated peptide of the present invention.
  • a therapeutic composition of the present invention can further comprise suitable excipients.
  • a therapeutic composition of the present invention can be formulated in an excipient that the subject to be treated can tolerate. Examples of such excipients include water, saline, Ringer's solution, dextrose solution, Hank's solution, and other aqueous physiologically balanced salt solutions.
  • Nonaqueous vehicles such as fixed oils, sesame oil, ethyl oleate, or triglycerides may also be used.
  • excipients include suspensions containing viscosity enhancing agents, such as sodium carboxymethylcellulose, sorbitol, or dextran. Excipients can also contain minor amounts of additives, such as substances that enhance isotonicity and chemical stability.
  • buffers include phosphate buffer, bicarbonate buffer and Tris buffer, while examples of preservatives include thimerosal, m-or o-cresol, formalin and benzyl alcohol.
  • Standard formulations can either be liquid injectables or solids which can be taken up in a suitable liquid as a suspension or solution for injection.
  • the excipient in a non-liquid formulation, the excipient can comprise dextrose, human serum albumin, preservatives, etc., to which sterile water or saline can be added prior to administration.
  • a therapeutic composition can also comprise a carrier.
  • Carriers are typically compounds that increase the half-life of a therapeutic composition in the treated animal. Suitable carriers include, but are not limited to, liposomes, micelles, cells, polymeric controlled release formulations, biodegradable implants, bacteria, viruses, oils, esters, and glycols. Preferred carriers include liposomes and micelles.
  • a therapeutic composition of the present invention can be administered to any subject having a medical disorder as herein described.
  • Acceptable protocols by which to administer therapeutic compounds of the present invention in an effective manner can vary according to individual dose size, number of doses, frequency of dose administration, and mode of administration. Determination of such protocols can be accomplished by those skilled in the art without resorting to undue experimentation.
  • An effective dose refers to a dose capable of treating a subject for a medical disorder as described herein. Effective doses can vary depending upon, for example, the therapeutic composition used, the medical disorder being treated, and the size and type of the recipient animal.
  • Effective doses to treat a subject include doses administered over time that are capable of regulating the activity, including growth, of cells involved in a medical disorder.
  • a first dose of a naked plasmid DNA compound of the present invention can comprise an amount of that causes a tumor to decrease in size by about 10% over 7 days when administered to a subject having a tumor.
  • a second dose can comprise at least the same the same therapeutic compound than the first dose.
  • Another aspect of the present invention includes a method for prescribing treatment for subjects having a medical disorder as described herein.
  • a preferred method for prescribing treatment comprises: (a) measuring the MEKK protein activity in a cell involved in the medical disorder to determine if the cell is susceptible to treatment using a method of the present invention; and (b) prescribing treatment comprising regulating the activity of an MEKK-dependent pathway relative to the activity of a Raf-dependent pathway in the cell to induce the apoptosis of the cell.
  • the step of measuring MEKK protein activity can comprise: (1) removing a sample of cells from a subject; (2) stimulating the cells with a TNF ⁇ ; and (3) detecting the state of phosphorylation of JEK protein using an immunoassay using antibodies specific for phosphothreonine and/or phosphoserine.
  • the present invention also includes antibodies capable of selectively binding to an MEKK protein of the present invention.
  • an antibody is herein referred to as an anti-MEKK antibody.
  • Polyclonal populations of anti-MEKK antibodies can be contained in an MEKK antiserum.
  • MEKK antiserum can refer to affinity purified polyclonal antibodies, ammonium sulfate cut antiserum or whole antiserum.
  • selective binds to refers to the ability of such an antibody to preferentially bind to MEKK proteins.
  • Binding can be measured using a variety of methods known to those skilled in the art including immunoblot assays, immunoprecipitation assays, enzyme immunoassays (e.g., ELISA), radioimmunoassays, immunofluorescent antibody assays and immunoelectron microscopy; see, for example, Sambrook et al., Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Labs Press, 1989.
  • Antibodies of the present invention can be either polyclonal or monoclonal antibodies and can be prepared using techniques standard in the art.
  • Antibodies of the present invention include functional equivalents such as antibody fragments and genetically-engineered antibodies, including single chain antibodies, that are capable of selectively binding to at least one of the epitopes of the protein used to obtain the antibodies.
  • antibodies are raised in response to proteins that are encoded, at least in part, by a MEKK nucleic acid molecule. More preferably antibodies are raised in response to at least a portion of an MEKK protein, and even more preferably antibodies are raised in response to either the amino terminus or the carboxyl terminus of an MEKK protein.
  • an antibody of the present invention has a single site binding affinity of from about 10 3 M -1 to about 10 12 M -1 for an MEKK protein of the present invention.
  • a preferred method to produce antibodies of the present invention includes administering to an animal an effective amount of an MEKK protein to produce the antibody and recovering the antibodies.
  • Antibodies of the present invention have a variety of potential uses that are within the scope of the present invention. For example, such antibodies can be used to identify unique MEKK proteins and recover MEKK proteins.
  • Another aspect of the present invention comprises a therapeutic compound capable of regulating the activity of an MEKK-dependent pathway in a cell identified by a process, comprising: (a) contacting a cell with a putative regulatory molecule; and (b) determining the ability of the putative regulatory compound to regulate the activity of an MEKK-dependent pathway in the cell by measuring the activation of at least one member of said MEKK-dependent pathway.
  • Preferred methods to measure the activation of a member of an MEKK-dependent pathway include measuring the transcription regulation activity of c-Myc protein, measuring the phosphorylation of a protein selected from the group consisting of MEKK, JEK, JNK, Jun, ATF-2, Myc, and combinations thereof.
  • Mitogen-activated protein kinase kinase is a serine/threonine protein kinase that functions parallel to Raf-1 in the regulation of sequential protein kinase pathways that involve both mitogen-activated and stress-activated protein kinases.
  • MEKK1 Mitogen-activated protein kinase kinase
  • 14-3-3 proteins The T cell 14-3-3 isoform, but not the ⁇ and stratifin isoforms, interacted with MEKK1 in the two-hybrid system.

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Abstract

The present invention relates to isolated MEKK proteins, nucleic acid molecules having sequences that encode such proteins, and antibodies raised against such proteins. The present invention also includes methods useful for identifying compounds capable of specifically regulating signal transduction in cells expressing MEKK protein.

Description

This invention was made in part with government support under USPHS Grant DK37871, USPHS Grant GM30324 and AI21768, both awarded by the National Institutes of Health. The government has certain rights to this invention.
CROSS-REFERENCE TO RELATED APPLICATIONS
The present application is a continuation-in-part application of U.S. patent application Ser. No. 08/440,421, entitled "Method and Product for Regulating Cell Responsiveness to External Signals", filed May 12, 1995, which is a continuation-in-part of U.S. patent application Ser. No. 08/354,516 entitled "Method and Product for Regulating Cell Responsiveness to External Signals", now abandoned filed Feb. 21, 1995, which is a divisional application of U.S. patent application Ser. No. 08/049,254, filed Apr. 15, 1993, now U.S. Pat. No. 5,405,941 entitled "MEKK Protein, Capable of Phosphorylating MEK", issued Apr. 11, 1995. The present application is also a continuation-in-part of U.S. patent application Ser. No. 08/323,460 entitled "Method and Product for Regulating Cell Responsiveness to External Signals", filed Oct. 14, 1994; PCT Application No. PCT/US94/11690 entitled "Method and Product for Regulating Cell Responsiveness to External Signals", filed Oct. 14, 1994; published as WO95/28421 Oct. 26, 1995 and PCT Application No. PCT/US94/04178 for "Method and Product for Regulating Cell Responsiveness to External Signals", filed Apr. 15, 1994, published as WO94/24159 Oct. 27, 1994, all of which are continuation-in-part applications of U.S. patent application Ser. No. 08/049,254, now U.S. Pat. No. 5,405,941. The above-referenced patents and patent applications are incorporated herein by this reference in their entirety.
FIELD OF THE INVENTION
This invention relates to isolated nucleic acid molecules encoding MEKK proteins, substantially pure MEKK proteins, and products and methods for regulating signal transduction in a cell.
BACKGROUND OF THE INVENTION
Mitogen-activated protein kinase (MAPKs) (also called extracellular signal-regulated kinases or ERKs) are rapidly activated in response to ligand binding by both growth factor receptors that are tyrosine kinases (such as the epidermal growth factor (EGF) receptor) and receptors that are coupled to heterotrimeric guanine nucleotide binding proteins (G proteins) such as the thrombin receptor. The MAPKs appear to integrate multiple intracellular signals transmitted by various second messengers. MAPKs phosphorylate and regulate the activity of enzymes and transcription factors including the EGF receptor, Rsk 90, phospholipase A2, c-Myc, c-Jun and Elk-1/TCF. Although the rapid activation of MAPKs by receptors that are tyrosine kinases is dependent on Ras, G protein-mediated activation of MAPK appears to occur through pathways dependent and independent of Ras.
Complementation analysis of the pheromone-induced ignaling pathway in yeast has defined a protein kinase system hat controls the activity of Spkl and Fus3-Kss1, the Schizosaccharomyces pombe and Saccharomyces cerevisiae homologs of MAPK (see for example, B. R. Cairns et al., Genes and Dev. 6, 1305 (1992); B. J. Stevenson et al., Genes and Dev. 6, 1293 (1992); S. A. Nadin-Davis et al., EMBO J. 7, 985 (1988); Y. Wang et al., Mol. Cell. Biol. 11, 3554 (1991). In S. cerevisiae, the protein kinase Ste7 is the upstream regulator of Fus3-Kss1 activity; the protein kinase Stell regulates Ste7. The S. pombe gene products Byr1 and Byr2 are homologous to Ste7 and Stell, respectively. The MEK (MAPK Kinase or ERK Kinase) or MKK (MAP Kinase kinase) enzymes are similar in sequence to Ste7 and Byr1. The MEKs phosphorylate MAPKs on both tyrosine and threonine residues which results in activation of MAPK. The mammalian serine-threonine protein kinase Raf phosphorylates and activates MEK, which leads to activation of MAPK. Raf is activated in response to growth factor receptor tyrosine kinase activity and therefore Raf may activate MAPK in response to stimulation of membrane-associated tyrosine kinases. Raf is unrelated in sequence to Ste11 and Byr2. Thus, Raf may represent a divergence in mammalian cells from the pheromone-responsive protein kinase system defined in yeast. Cell and receptor specific differences in the regulation of MAPKs suggest that other Raf independent regulators of mammalian MEKs exist.
Certain biological functions, such as growth and differentiation, are tightly regulated by signal transduction pathways within cells. Signal transduction pathways maintain the balanced steady state functioning of a cell. Disease states can arise when signal transduction in a cell breaks down, thereby removing the tight control that typically exists over cellular functions. For example, tumors develop when regulation of cell growth is disrupted enabling a clone of cells to expand indefinitely. Because signal transduction networks regulate a multitude of cellular functions depending upon the cell type, a wide variety of diseases can result from abnormalities in such networks. Devastating diseases such as cancer, autoimmune diseases, allergic reactions, inflammation, neurological disorders and hormone-related diseases can result from abnormal signal transduction.
Despite a long-felt need to understand and discover methods for regulating cells involved in various disease states, the complexity of signal transduction pathways has precluded the development of products and processes for regulating cellular function by manipulating signal transduction pathways in a cell. As such, there remains a need for products and processes that permit the implementation of predictable controls of signal transduction in cells, thus enabling the treatment of various diseases that are caused by abnormal cellular function.
SUMMARY OF THE INVENTION
The present invention provides a solution to the complex problem of identifying putative regulatory compounds which can be used to regulate cellular responses. Despite the complexity of signal transduction networks in cells, the present invention provides for an efficient method for identifying compounds capable of specifically regulating signal transduction in a cell, preferably through identifying signal transduction pathways regulated by such compounds, and more preferably through identifying a site of activity of a putative regulatory compound within a complex signal transduction pathway. In particular, the present invention provides a method to the identify compounds that act at a specific site in a signal transduction pathway involving MEKK protein.
The present application incorporates herein by this reference in their entirety all subject matter as taught in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995; U.S. patent application Ser. No. 08/410,602, entitled "AN ASSAY AND METHOD FOR SCREENING CELL REGULATORY REAGENTS," filed Mar. 24, 1995; U.S. patent application Ser. No. 08/354,516 entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed Dec. 13, 1994; U.S. Pat. Ser. No. 5,405,941, entitled "MEKK PROTEIN, CAPABLE OF PHOSPHORYLATING MEK," issued Apr. 11, 1995; U.S. patent application Ser. No. 08/323,460, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed Oct. 14, 1994; and as taught in related PCT Application No. PCT/US94/11690, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed Oct. 14, 1994; and PCT Application No. PCT/US94/04178 for "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed Apr. 15, 1994.
In particular, the present invention provides a method for identifying compounds which specifically regulate the activity of elements of the raf-independent arm of the MEK kinase (MEKK) pathway. Such MEKK pathway includes MEKK, Jun kinase kinase (JNKK) and other members of the MEK pathway, which in turn regulate the activity of signalling molecules such as MAPK, p38 and JNK. Those of skill in the art will immediately recognize the advantages arising from this invention which include the identification and uses of compounds which act to specifically modify the activity of a signal transduction pathway involving MEKK protein.
The present invention provides for an assay using cells having signal transduction pathways involving MEKK to identify regulatory compounds capable of altering signal transduction in a cell and determining at which step of signal transduction pathway the compound exerts its effect.
One embodiment of the present invention includes a method to identify compounds capable of regulating a signal transduction pathway in a cell, comprising: (a) contacting a cell having a signal transduction pathway with a putative regulatory compound, in which one of the signal transduction pathways includes an MEKK protein of the present invention; and (b) assessing the ability of the putative regulatory compound to regulate signal transduction in the cell by measuring the phosphorylation of proteins including MAPK, JNK, p38, MEKK, JNKK, Syk, Fyn, and Lyn protein. In particular, the step of assessing is performed using antibodies including anti-MEKK, anti-MAPK, anti-JNK, anti-p38, anti-MEK, anti-JNKK, anti-Syk, anti-Fyn, anti-Lyn and anti-phosphotyrosine antibodies.
The present invention also includes a method to identify a non-toxic signal transduction regulator that is capable of regulating an MEKK signal transduction pathway in a mammalian cell, in which the signal transduction regulator is identified by contacting a putative regulatory compound with at least one compound involved in an MEKK signal transduction pathway and identifying a signal transduction regulator by assessing the ability of the putative regulatory compound to regulate the MEKK signal transduction pathway, the method comprising contacting the signal transduction regulator with a mammalian cell having a signal transduction pathway, and assessing: (a) the ability of the signal transduction regulator to regulate the MEKK signal transduction pathway; and (b) the toxicity of the signal transduction regulator on the mammalian cell. In particular, the step of assessing toxicity is measured by Coomassie blue staining, acridine orange staining, terminal deoxynucelotidyl transferase (TDT) assays, neutral red exclusion, measuring changes in forward light scattering in a flow cytometer, and measuring changes in redox potential of a cell or its ability to reduce a chromogenic substrate.
One aspect of the present invention is a method to identify compounds capable of regulating an MEKK signal transduction pathway in a cell, comprising: (a) contacting a putative regulatory compound of a signal transduction pathway with a recombinant cell transfected with at least one nucleic acid molecule encoding a transcription factor and a reporter protein, and having a transcriptional activator binding nucleic acid sequence, in which the protein encoded by the transcription factor nucleic acid molecule, and the transcriptional activator binding nucleic acid sequence, are capable of regulating the transcription of the reporter protein nucleic acid molecule; and (b) assessing the ability of the putative regulatory compound to regulate the expression. of the reporter protein. Preferably, the recombinant cell has an activator recombinant molecule comprising a nucleic acid molecule operatively linked to an expression vector, the nucleic acid molecule encoding at least one transcription factor and at least one transcriptional activator. In addition, the recombinant cell can further comprise a reporter recombinant molecule comprising a nucleic acid molecule operatively linked to an expression vector, the nucleic acid molecule having at least one transcriptional activator binding nucleic acid sequence and at least one nucleic acid sequence encoding a reporter protein.
Yet another aspect of the present invention includes a method to identify compounds capable of regulating a biological response in a mammal, comprising: (a) contacting a mammalian cell with a putative regulatory compound, in which the mammalian cell has a signal transduction pathway involving MEKK; (b) assessing the ability of the putative regulatory compound to specifically regulate the activity of the signal transduction pathway by determining the phosphorylation of MEKK; and (c) administering the putative regulatory compound to an animal to determine the effectiveness of the putative regulatory compound in the regulation of a biological response in the animal, in which the biological response includes an inflammatory response, a response to an infectious agent, an autoimmune response, a metabolic response, a cardiovascular response, an allergic response and an abnormal cellular growth response.
DETAILED DESCRIPTION OF THE INVENTION
The present invention relates to a novel mitogen ERK kinase kinase protein (MEKK) capable of regulating signal transduction in cells. The present invention includes a novel method for treating disease by regulating the activity of cells involved in such disease. The present invention is particularly advantageous in that the novel product and method of the present invention is capable of regulating a signal transduction pathway that can lead to cellular apoptosis.
One embodiment of the present invention is an isolated MEKK protein. According to the present invention, an isolated protein is a protein that has been removed from its natural milieu. An isolated MEKK protein can, for example, be obtained from its natural source, be produced using recombinant DNA technology, or be synthesized chemically. As used herein, an isolated MEKK protein can be a full-length MEKK protein or any homologue of such a protein, such as an MEKK protein in which amino acids have been deleted (e.g., a truncated version of the protein, such as a peptide), inserted, inverted, substituted and/or derivatized (e.g., by glycosylation, phosphorylation, acetylation, myristoylation, prenylation, palmitoylation, amidation and/or addition of glycosylphosphatidyl inositol), wherein the modified protein is capable of phosphorylating mitogen ERK kinase (MEK) and/or Jun ERK kinase (JEK). A homologue of an MEKK protein is a protein having an amino acid sequence that is sufficiently similar to a natural MEKK protein amino acid sequence that a nucleic acid sequence encoding the homologue is capable of hybridizing under stringent conditions to (i.e., with) a nucleic acid sequence encoding the natural MEKK protein amino acid sequence. As used herein, stringent hybridization conditions refer to standard hybridization conditions under which nucleic acid molecules, including oligonucleotides, are used to identify similar nucleic acid molecules. Such standard conditions are disclosed, for example, in Sambrook et al., Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Labs Press, 1989. A homologue of an MEKK protein also includes a protein having an amino acid sequence that is sufficiently cross-reactive such that the homologue has the ability to elicit an immune response against at least one epitope of a naturally-occurring MEKK protein.
The minimal size of a protein homologue of the present invention is a size sufficient to be encoded by a nucleic acid molecule capable of forming a stable hybrid with the complementary sequence of a nucleic acid molecule encoding the corresponding natural protein. As such, the size of the nucleic acid molecule encoding such a protein homologue is dependent on nucleic acid composition, percent homology between the nucleic acid molecule and complementary sequence, as well as upon hybridization conditions per se (e.g., temperature, salt concentration, and formamide concentration). The minimal size of such nucleic acid molecules is typically at least about 12 to about 15 nucleotides in length if the nucleic acid molecules are GC-rich and at least about 15 to about 17 bases in length if they are AT-rich. As such, the minimal size of a nucleic acid molecule used to encode an MEKK protein homologue of the present invention is from about 12 to about 18 nucleotides in length. There is no limit, other than a practical limit, on the maximal size of such a nucleic acid molecule in that the nucleic acid molecule can include a portion of a gene, an entire gene, or multiple genes, or portions thereof. Similarly, the minimal size of an MEKK protein homologue of the present invention is from about 4 to about 6 amino acids in length, with preferred sizes depending on whether a full-length, multivalent protein (i.e., fusion protein having more than one domain each of which has a function), or a functional portion of such a protein is desired.
MEKK protein homologues can be the result of allelic variation of a natural gene encoding an NEKK protein. A natural gene refers to the form of the gene found most often in nature. MEKK protein homologues can be produced using techniques known in the art including, but not limited to, direct modifications to a gene encoding a protein using, for example, classic or recombinant DNA techniques to effect random or targeted mutagenesis. The ability of an MEKK protein homologue to phosphorylate MEK and/or JEK protein can be tested using techniques known to those skilled in the art. Such techniques include phosphorylation assays described in detail in the Examples section.
In one embodiment, an MEKK protein of the present invention is capable of regulating an MEKK-dependent pathway. According to the present invention, an MEKK-dependent pathway refers generally to a pathway in which MEKK protein regulates a pathway substantially independent of Raf, and a pathway in which MEKK protein regulation converges with common members of a pathway involving Raf protein, in particular, MEK protein. A suitable MEKK-dependent pathway includes a pathway involving MEKK protein and JEK protein, but not Raf protein. One of skill in the art can determine that regulation of a pathway by an MEKK protein is substantially independent of Raf protein by comparing the ability of an MEKK protein and a Raf protein to regulate the phosphorylation of a downstream member of such pathway using, for example, the general method described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995. An MEKK protein regulates a pathway substantially independently of Raf protein if the MEKK protein induces phosphorylation of a member of the pathway downstream of MEKK (e.g., proteins including JEK, Jun kinase, Jun and/or ATF-2) by an amount significantly greater than that seen when Raf protein is utilized. For example, MEKK induction of phosphorylation of JNK is preferably at least about 10-fold, more preferably at least about 20-fold and even more preferably at least about 30-fold, greater phosphorylation of JNK protein than the phosphorylation induced when using Raf protein. If MEKK induction of phosphorylation is similar to Raf protein induction of phosphorylation, then one of skill in the art can conclude that regulation of a pathway by an MEKK protein includes members of a signal transduction pathway that could also include Raf protein. For example, MEKK induction of phosphorylation of NAPK is of a similar magnitude as induction of phosphorylation with Raf protein.
A "Raf-dependent pathway" can refer to a signal transduction pathway in which Raf protein regulates a signal transduction pathway substantially independently of MEKK protein, and a pathway in which Raf protein regulation converges with common members of a pathway involving MEKK protein. The independence of regulation of a pathway by a Raf protein from regulation of a pathway by an MEKK protein can be determined using methods similar to those used to determine MEKK independence.
In another embodiment, an MEKK protein is capable of regulating the activity of signal transduction proteins including, but not limited to, mitogen ERK kinase (MEK), mitogen activated protein kinase (MAPK), transcription control factor (TCF), Ets-like-1 transcription factor (Elk-1), Jun ERK kinase (JEK), Jun kinase (JNK; which is equivalent to SAPK), stress activated MAPK proteins, Jun, activating transcription factor-2 (ATF-2) and/or Myc protein. As used herein, the "activity" of a protein can be directly correlated with the phosphorylation state of the protein and/or the ability of the protein to perform a particular function (e.g., phosphorylate another protein or regulate transcription). Preferred MEK proteins regulated by an MEKK protein of the present invention include MEK-1 and/or MEK-2. Preferred MAPK proteins regulated by an MEKK protein of the present invention include p38 MAPK, p42 MAPK (which is equivalent to ERK2) and/or p44 (which is equivalent to ERK1) MAPK. Preferred stress activated MAPK proteins regulated by an MEKK protein of the present invention include Jun kinase (JNK), stress activated MAPK-α and/or stress activated MAPK-β.
An MEKK protein of the present invention is capable of increasing the activity of an MEK protein over basal levels of MEK (i.e., levels found in nature when not stimulated). For example, an MEKK protein is preferably capable of increasing the phosphorylation of an MEK protein by at least about 2-fold, more preferably at least about 3-fold, and even more referably at least about 4-fold over basal levels when measured under conditions described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
A preferred MEKK protein of the present invention is also capable of increasing the activity of an MAPK protein over basal levels of MAPK (i.e., levels found in nature when not stimulated). For example, an MEKK protein of the present invention is preferably capable of increasing MAPK activity at least about 2-fold, more preferably at least about 3-fold, and even more preferably at least about 4-fold over basal activity when measured under the conditions described in related U.S. patent application Ser. No. 008/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
Moreover, an MEKK protein of the present invention is capable of increasing the activity of a JNK protein. JNK regulates the activity of the transcription factor JUN which is involved in controlling the growth and differentiation of different cell types, such as T cells, neural cells or fibroblasts. JNK shows structural and regulatory homologies with MAPK. For example, an MEKK protein of the present invention is preferably capable of inducing the phosphorylation of JNK protein at least about 30 times more than Raf, more preferably at least about 40 times more than Raf, and even more preferably at least about 50 times more than Raf, when measured under conditions described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
In addition, an MEKK protein of the present invention is capable of binding to Ras protein. In particular, an MEKK protein is capable of binding to a Ras protein that is associated with GTP. According to the present invention, an MEKK protein binds to Ras via the COOH terminal region of the MEKK protein.
In a preferred embodiment, an MEKK protein of the present invention is capable of phosphorylating MEK, MKK, Jun kinase kinase (JNKK) and stress activated ERK kinase (SEK), in particular MEK1, MEK2, MKK1, MKK2, MKK3, MKK4, JNKK1, JNKK2, SEK1 and SEK2 protein. As described herein, MEK1 and MEK2 are equivalent to MKKl and MKK2, respectively and are referred to 20 as MEK1 and MEK2. In addition, JNKK1 and JNKK2 are equivalent to MKK3 and MKK4, which are equivalent to SEK1 and SEK2, respectively, and are referred to herein as JNKK1 and JNKK2.
A preferred MEKK protein of the present invention is additionally capable of inducing the phosphorylation of a c-Myc transcriptional transactivation domain protein in such a manner that the phosphorylated transcriptional transactivation domain of c-Myc is capable of regulating gene transcription. The ability of an MEKK protein to regulate phosphorylation of a c-Myc transcriptional transactivation domain protein exceeds the ability of Raf protein or cyclic AMP-dependent protein kinase to regulate a c-Myc protein. For example, an NEKK protein of the present invention is preferably capable of inducing luciferase gene transcription by phosphorylated c-Myc transcriptional transctivation domain protein at least about 25-fold, more preferably at least about 35-fold, and even more preferably at least about 45-fold, over Raf induction when measured under the conditions described in related U.S. patent application Ser. No. 08/440, 421entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
Another aspect of the present invention relates to the ability of MEKK activity to be stimulated by growth factors including, but not limited to, epidermal growth factor (EGF), neuronal growth factor (NGF), tumor necrosis factor (TNF), C5A, interleukin-8 (IL-8), monocyte chemotactic protein 1 (MIPla), monocyte chemoattractant protein 1 (MCP-1), platelet activating factor (PAF), N-Formyl-methionyl-leucyl- phenylalanine (FMLP), leukotriene B4 (LTB4 R), gastrin releasing peptide (GRP), IgE, major histocompatibility protein (MHC), peptide, superantigen, antigen, vasopressin, thrombin, bradykinin and acetylcholine. In addition, the activity of an MEKK protein of the present invention is capable of being stimulated by compounds including phorbol esters such as TPA. A preferred MEKK protein is also capable of being stimulated by EGF, NGF and TNF (especially TNFα).
Preferably, the activity of an MEKK protein of the present invention is capable of being stimulated at least 2-fold over basal levels (i.e., levels found in nature when not stimulated), more preferably at least about 4-fold over basal levels and even more preferably at least about 6-fold over basal levels, when a cell producing the MEKK protein is contacted with EGF under the conditions described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
Similarly, the activity of an MEKK protein of the present invention is capable of being stimulated at least 1-fold over basal levels, more preferably at least about 2-fold over basal levels and even more preferably at least about 3-fold over basal levels by NGF stimulation, when a cell producing the.
MEKK protein is contacted with NGF under the conditions described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
Preferably, an MEKK protein of the present invention is capable of being stimulated at least 0.5-fold over basal levels, more preferably at least about 1-fold over basal levels and even more preferably at least about 2-fold over 5 basal levels by TPA stimulation when a cell producing the MEKK protein is contacted with TPA under the conditions described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995.
TNF is capable of regulating cell death and other functions in different cell types. The present inventor discovered that MEKK stimulation by TNF is independent of Raf.
Similarly, the present inventor is the first to appreciate that an MEKK protein can be directly stimulated by ultraviolet light (UV) damage of cells while a Raf-dependent pathway cannot. Therefore, both TNF and UV stimulate MEKK activity without substantially activating Raf. In addition, both UV and TNF activation of MEKK is Ras dependent.
Another aspect of the present invention is the recognition that an MEKK protein of the present invention is capable of regulating the apoptosis of a cell, an ability not shared by Raf protein. As used herein, apoptosis refers to the form of cell death that comprises: progressive contraction of cell volume with the preservation of the integrity of cytoplasmic organelles; condensation of chromatin, as viewed by light or electron microscopy; and DNA cleavage, as determined by centrifuged sedimentation assays. Cell death occurs when the membrane integrity of the cell is lost and cell lysis occurs. Apoptosis differs from necrosis in which cells swell and eventually rupture.
A preferred MEKK protein of the present invention is capable of inducing the apoptosis of cells, such that the cells have characteristics substantially similar to cytoplasmic shrinkage and/or nuclear condensation as described in related U.S. patent application Ser. No. 08/440,421, entitled "METHOD AND PRODUCT FOR REGULATING CELL RESPONSIVENESS TO EXTERNAL SIGNALS," filed May 15, 1995. Cells were microinjected with expression plasmids encoding MEKK protein. Injected cells were identified using anti-β-Gal antibody and the DNA of the cells were stained with propidium iodide. Cytoplasmic organization was monitored using an anti-tubulin antibody. The cells were then imaged by differential fluorescent imaging microscopy using techniques standard in the art. The cells demonstrated apoptosis by displaying a morphology having cytoplasmic shrinkage and nuclear condensation.
A schematic representation of the cell growth regulatory signal transduction pathway that is MEKK dependent. An MEKK protein of the present invention is capable of regulating the activity of JEK protein, JNK protein, Jun protein and/or ATF-2 protein, and Myc protein, such regulation being substantially, if not entirely, independent of Raf protein. Such Raf-independent regulation can regulate the growth characteristics of a cell, including the apoptosis of a cell. In addition, an MEKK protein of the present invention is capable of regulating the activity of MEK protein, which is also capable of being regulated by Raf protein. As such, an MEKK protein of the present invention is capable of regulating the activity of MAPK protein and members of the Ets family of transcription factors, such as TCF protein, also referred to as Elk-1 protein.
An MEKK protein of the present invention is capable of being activated by a variety of growth factors capable of activating Ras protein. In addition, an MEKK protein is capable of activating JNK protein which is also activated by Ras protein, but is not activated by Raf protein. As such, an MEKK protein of the present invention comprises a protein kinase at a divergence point in a signal transduction pathway initiated by different cell surface receptors. An MEKK protein is also capable of being regulated by TNF protein independent of Raf, thereby indicating an association of MEKK protein to a novel signal transduction pathway which is independent of Ras protein and Raf protein. Thus, an MEKK protein is capable of performing numerous unique functions independent of or by-passing Raf protein in one or more signal transduction pathways. An MEKK protein is capable of regulating the activity of MEK and/or JEK activity. As such, an MEKK protein is capable of regulating the activity of members of a signal transduction pathway that does not substantially include Raf activity. Such members include, but are not limited to, JNK, Jun, ATF and Myc protein. In addition, an MEKK protein is capable of regulating the members of a signal transduction pathway that does involve Raf, such members including, but are not limited to, MEK, MAPK and TCF. An MEKK protein of the present invention is thus capable of regulating the apoptosis of a cell independent of significant involvement by Raf protein.
In addition to the numerous functional characteristics of an MEKK protein, an MEKK protein of the present invention comprises numerous unique structural characteristics. For example, in one embodiment, an MEKK protein of the present invention includes at least one of two different structural domains having particular functional characteristics. Such structural domains include an NH2 -terminal regulatory domain that serves to regulate a second structural domain comprising a COOH-terminal protein kinase catalytic domain that is capable of phosphorylating an MEK protein and/or JEK protein.
According to the present invention, an MEKK protein c,f the present invention includes a full-length MEKK protein, as well as at least a portion of an MEKK protein capable of performing at least one of the functions defined above. The phrase "at least a portion of an MEKK protein" refers to a portion of an MEKK protein encoded by a nucleic acid molecule that is capable of hybridizing, under stringent conditions, with a nucleic acid encoding a full-length MEKK protein of the present invention. Preferred portions of MEKK proteins are useful for regulating apoptosis in a cell. Additional preferred portions have activities useful for regulating MEKK kinase activity. Suitable sizes for portions of an MEKK protein of the present invention are as disclosed for MEKK protein homologues of the present invention.
In another embodiment, an MEKK protein of the present invention includes at least a portion of an MEKK protein having molecular weights ranging from about 70 kD to about 250 kD as determined by Tris-glycine SDS-PAGE, preferably using an 8% polyacrylamide SDS gel (SDS-PAGE) and resolved using methods standard in the art. A preferred MEKK protein has a molecular weight ranging from about 75 kD to about 225 kD and even more preferably from about 80 kD to about 200 kD.
In yet another embodiment, an MEKK protein of the present invention comprises at least a portion of an MEKK protein encoded by an MRNA (messenger ribonucleic acid) ranging from about 3.5 kb to about 12.0 kb, more preferably ranging from about 4.0 kb to about 11.0 kb, and even more preferably ranging from about 4.5 kb to about 10.0 kb. Particularly preferred MEKK proteins comprise at least a portion of an MEKK protein encoded by an mRNA having a size ranging from about 4.5 kb to about 5.0 kb, a size ranging from about 6.0 kb to about 6.5 ki, a size of about 7.0 kb, or a size ranging from about 8.0 kb to about 10.0 kb.
In another embodiment, an NH2 -terminal regulatory domain of the present invention includes an NH2 -terminal comprising about 400 amino acids having at least about 10% serine and/or threonine residues, more preferably about 400 amino acids having at least about 15% serine and/or threonine residues, and even more preferably about 400 amino acids having at least about 20% serine and/or threonine residues.
A preferred an NH2 -terminal regulatory domain of the present invention includes an NH2 -terminal comprising about 360 amino acids having at least about 10% serine and/or threonine residues, more preferably about 360 amino acids having at least about 15% serine and/or threonine residues, and even more preferably about 360 amino acids having at least about 20% serine and/or threonine residues.
Another preferred an NH2 -terminal regulatory domain of the present invention includes an NH2 -terminal comprising about 370 amino acids having at least about 10% serine and/or threonine residues, more preferably about 370 amino acids having at least about 15% serine and/or threonine residues, and even more preferably about 370 amino acids having at least about 20% serine and/or threonine residues.
In one embodiment, an MEKK protein of the present invention is devoid of SH2 and SH3 domains.
In another embodiment, an MEKK protein of the present invention includes at least a portion of an MEKK protein homologue preferably having at least about 50%, more preferably at least about 75%, and even more preferably at least about 85% amino acid homology (identity within comparable regions) with the kinase catalytic domain of a naturally occurring MEKK protein. Another MEKK protein of the present invention also includes at least a portion of an MEKK homologue of the present invention has at least about 10%, more preferably at least about 20%, and even more preferably at least about 30% amino acid homology with the NH2 -terminal regulatory domain of an MEKK protein of a naturally occurring MEKK protein.
The sequences comprising the catalytic domain of an MEKK protein are involved in phosphotransferase activity, and therefore display a relatively conserved amino acid sequence. The NH2 -terminal regulatory domain of an MEKK protein, however, can be substantially divergent. The lack of significant homology between MEKK protein NH2 -terminal regulatory domains is related to the regulation of each of such domains by different upstream regulatory proteins. For example, an MEKK protein can be regulated by the protein Ras, while others can be regulated independent of Ras. In addition, some MEKK proteins can be regulated by the growth factor TNFα, while others cannot. As such, the NH2 -terminal regulatory domain of an MEKK protein provides selectivity for upstream signal transduction regulation, while the catalytic domain provides for MEKK substrate selectivity function.
A preferred MEKK homologue has at least about 50%, more preferably at least about 75% and even more preferably at least about 85% amino acid homology with the kinase catalytic domain of an MEKK protein having an amino acid sequence as shown in sequence identification numbers disclosed in U.S. Pat. No. 5,405,941, PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421. Such sequence listings are incorporated herein by this reference in their entirety. Another preferred MEKK homologue has at least about 10%, more preferably at least about 20% and even more preferably at least about 30% amino acid homology with the NH2 -terminal regulatory domain of an MEKK protein having the amino acid sequence shown in the sequence listings incorporated by reference herein.
In a preferred embodiment, an MEKK protein of the present invention includes at least a portion of an MEKK protein homologue of the present invention that is encoded by a nucleic acid molecule having at least about 50%, more preferably at least about 75%, and even more preferably at least about 85% homology with a nucleic acid molecule encoding the kinase catalytic domain of an MEKK protein. Another preferred MEKK protein homologue is encoded by a nucleic acid molecule having at least about 10%, more preferably at least about 20%, and even more preferably at least about 30% homology with a nucleic acid molecule encoding the NH2-terminal regulatory domain of an MEKK protein.
Still another preferred MEKK homologue is encoded by a nucleic acid molecule having at least about 50%, more preferably at least about 75% and even more preferably at least about 85% amino acid homology with the kinase catalytic domain of an MEKK protein encoded by the nucleic acid sequence shown in the sequence listings incorporated by reference herein. An MEKK homologue also includes those encoded by a nucleic acid molecule having at least about 10%, more preferably at least about 20% and even more preferably at least about 30% amino acid homology with the NH2 -terminal regulatory domain of an MEKK protein encoded by the nucleic acid sequence shown in the sequence listings incorporated by reference herein.
It should be noted that since nucleic acid and amino acid sequencing technology is not entirely error-free, the foregoing sequences, at best, represent apparent nucleic acid and amino acid sequences of an MEKK protein of the present invention.
According to the present invention, an MEKK protein of the present invention can include MEKK proteins that have undergone post-translational modification. Such modification can include, for example, glycosylation (e.g., including addition of N-linked and/or 0-linked oligosaccharides) or post-translational conformational changes or post-translational deletions.
Another embodiment of the present invention is an isolated nucleic acid molecule capable of hybridizing, under stringent conditions, with an MEKK protein gene encoding an MEKK protein of the present invention. In accordance with the present invention, an isolated nucleic acid molecule is a nucleic acid molecule that has been removed from its natural milieu (i.e., that has been subject to human manipulation). As such, "isolated" does not reflect the extent to which the nucleic acid molecule has been purified. An isolated nucleic acid molecule can include DNA, RNA, or derivatives of either DNA or RNA.
An isolated nucleic acid molecule of the present invention can be obtained from its natural source either as an entire (i.e., complete) gene or a portion thereof capable of forming a stable hybrid with that gene. As used herein, the phrase "at least a portion of" an entity refers to an amount of the entity that is at least sufficient to have the functional aspects of that entity. For example, at least a portion of a nucleic acid sequence, as used herein, is an amount of a nucleic acid sequence capable of forming a stable hybrid with a particular desired gene (e.g., MEKK genes) under stringent hybridization conditions. An isolated nucleic acid. molecule of the present invention can also be produced using recombinant DNA technology (e.g., polymerase chain reaction (PCR) amplification, cloning) or chemical synthesis. Isolated MEKK protein nucleic acid molecules include natural nucleic acid molecules and homologues thereof, including, but not limited to, natural allelic variants and modified nucleic acid molecules in which nucleotides have been inserted, deleted, substituted, and/or inverted in such a manner that such modifications do not substantially interfere with the nucleic acid molecule's ability to encode an MEKK protein of the present invention or to form stable hybrids under stringent conditions with natural nucleic acid molecule isolates of MEKK.
Preferred modifications to an MEKK protein nucleic acid molecule of the present invention include truncating a full-length MEKK protein nucleic acid molecule by, for example: deleting at least a portion of an MEKK protein nucleic acid molecule encoding a regulatory domain to produce a constitutively active MEKK protein; deleting at least a portion of an MEKK protein nucleic acid molecule encoding a catalytic domain to produce an inactive MEKK protein; and modifying the MEKK protein to achieve desired inactivation and/or stimulation of the protein, for example, substituting a codon encoding a lysine residue in the catalytic domain (i.e., phosphotransferase domain) with a methionine residue to inactivate the catalytic domain.
A preferred truncated MEKK nucleic acid molecule encodes a form of an MEKK protein containing a catalytic domain but that lacks a regulatory domain. Preferred catalytic domain truncated MEKK nucleic acid molecules encode particular residues as disclosed in sequence identification numbers disclosed in U.S. Pat. No. 5,405,941, PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421.
Another preferred truncated MEKK nucleic acid molecule encodes a form of an MEKK protein comprising an NH2 -terminal regulatory domain a catalytic domain but lacking a catalytic domain. Preferred regulatory domain truncated MEKK nucleic acid molecules encode particular residues as disclosed in sequence identification numbers disclosed in U.S. Pat. No. 5,405,941, PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421.
An isolated nucleic acid molecule of the present invention can include a nucleic acid sequence that encodes at least one MEKK protein of the present invention, examples of such proteins being disclosed herein. Although the phrase "nucleic acid molecule" primarily refers to the physical nucleic acid molecule and the phrase "nucleic acid sequence" primarily refers to the sequence of nucleotides that comprise the nucleic acid molecule, the two phrases can be used interchangeably. As heretofore disclosed, MEKK proteins of the present invention include, but are not limited to, proteins having full-length MEKK protein coding regions, portions thereof, and other MEKK protein homologues.
As used herein, an MEKK protein gene includes all nucleic acid sequences related to a natural MEKK protein gene such as regulatory regions that control production of an MEKK protein encoded by that gene (including, but not limited to, transcription, translation or post-translation control regions) as well as the coding region itself. A nucleic acid molecule of the present invention can be an isolated natural MEKK protein nucleic acid molecule or a homologue thereof. A nucleic acid molecule of the present invention can include one or more regulatory regions, full-length or partial coding regions, or combinations thereof. The minimal size of an MEEK protein nucleic acid molecule of the present invention is the minimal size capable of forming a stable hybrid under stringent hybridization conditions with a corresponding natural gene.
An MEKK protein nucleic acid molecule homologue can be produced using a number of methods known to those skilled in the art (see, e.g., Sambrook et al., ibid.). For example, ucleic acid molecules can be modified using a variety of techniques including, but not limited to, classic mutagenesis techniques and recombinant DNA techniques, such as site-directed mutagenesis, chemical treatment of a nucleic acid molecule to induce mutations, restriction enzyme cleavage of a nucleic acid fragment, ligation of nucleic acid fragments, polymerase chain reaction (PCR) amplification and/or mutagenesis of selected regions of a nucleic acid sequence, synthesis of oligonucleotide mixtures and ligation of mixture groups to "build" a mixture of nucleic acid molecules and combinations thereof. Nucleic acid molecule homologues can be selected from a mixture of modified nucleic acids by screening for the function of the protein encoded by the nucleic acid (e.g., the ability of a homologue to phosphorylate MEK protein or JEK protein) and/or by hybridization with isolated MEEK protein nucleic acids under stringent conditions.
One embodiment of the present invention is an MEKK protein nucleic acid molecule capable of encoding at least a portion of an MEKK protein, or a homologue thereof, as described herein. A preferred nucleic acid molecule of the present invention includes, but is not limited to, a nucleic acid molecule that encodes a protein having at least a portion of an amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
A preferred nucleic acid molecule of the present invention is capable of hybridizing under stringent conditions to a nucleic acid that encodes at least a portion of an MEKK protein, or a homologue thereof. Also preferred is an MEKK protein nucleic acid molecule that includes a nucleic acid sequence having at least about 50%, preferably at least about 75%, and more preferably at least about 85% homology with the corresponding region(s) of the nucleic acid sequence encoding the catalytic domain of an MEKK protein, or a homologue thereof. Also preferred is an MEKK protein nucleic acid molecule that includes a nucleic acid sequence having at least about 20%, preferably at least about 30%, and more preferably at least about 40% homology with the corresponding region(s) of the nucleic acid sequence encoding the NH2 -terminal regulatory domain of an MEKK protein, or a homologue thereof. A particularly preferred nucleic acid sequence is a nucleic acid sequence having at least about 50%, preferably at least about 75%, and more preferably at least about 85% homology with a nucleic acid sequence encoding the catalytic domain of an amino acid sequence shown in the sequence listings incorporated by reference herein. Another particularly preferred nucleic acid sequence is a nucleic acid sequence having at least about 20%, preferably at least about 30%, and more preferably at least about 40% homology with a nucleic acid sequence encoding the NH2 -terminal regulatory domain of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
Such nucleic acid molecules can be a full-length gene and/or a nucleic acid molecule encoding a full-length protein, a hybrid protein, a fusion protein, a multivalent protein or a truncation fragment. More preferred nucleic acid molecules of the present invention comprise isolated nucleic acid molecules having the nucleic acid sequence shown in the sequence listings incorporated by reference herein.
Knowing a nucleic acid molecule of an MEKK protein of the present invention allows one skilled in the art to make copies of that nucleic acid molecule as well as to obtain additional portions of MEKK protein-encoding genes (e.g., nucleic acid molecules that include the translation start site and/or transcription and/or translation control regions), and/or MEKK protein nucleic acid molecule homologues. Knowing a portion of an amino acid sequence of an MEKK protein of the present invention allows one skilled in the art to clone nucleic acid sequences encoding such an MEKK protein.
The present invention also includes nucleic acid molecules that are oligonucleotides capable of hybridizing, under stringent conditions, with complementary regions of other, preferably longer, nucleic acid molecules of the present invention that encode at least a portion of an MEKK protein, or a homologue thereof. A preferred oligonucleotide is capable of hybridizing, under stringent conditions, with a nucleic acid molecule that is capable of encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof. A more preferred oligonucleotide is capable of hybridizing to a nucleic acid molecule having the nucleic acid sequence shown in the sequence listings incorporated by reference herein, or complements thereof.
Oligonucleotides of the present invention can be RNA, DNA, or derivatives of either. The minimal size of such oligonucleotides is the size required to form a stable hybrid between a given oligonucleotide and the complementary sequence on another nucleic acid molecule of the present invention Minimal size characteristics are disclosed herein. The size of the oligonucleotide must also be sufficient for the use of the oligonucleotide in accordance with the present invention. oligonucleotides of the present invention can be used in a variety of applications including, but not limited to, as probes to identify additional nucleic acid molecules, as primers to amplify or extend nucleic acid molecules or in therapeutic applications to inhibit, for example, expression of MEKK proteins by cells. Such therapeutic applications include the use of such oligonucleotides in, for example, antisense-, triplex formation-, ribozyme- and/or RNA drug- based technologies. The present invention, therefore, includes use of such oligonucleotides and methods to interfere with the production of MEKK proteins.
In one embodiment, an isolated MEKK protein of the present invention is produced by culturing a cell capable of expressing the protein under conditions effective to produce the protein, and recovering the protein. A preferred cell to culture is a recombinant cell that is capable of expressing the MEKK protein, the recombinant cell being produced by transforming a host cell with one or more nucleic acid molecules of the present invention. Transformation of a nucleic acid molecule into a cell can be accomplished by any method by which a nucleic acid molecule can be inserted into the cell. Transformation techniques include, but are not limited to, transfection, electroporation, microinjection, lipofection, adsorption, and protoplast fusion. A recombinant cell may remain unicellular or may grow into a tissue, organ or a multicellular organism. Transformed nucleic acid molecules of the present invention can remain extrachromosomal or can integrate into one or more sites within a chromosome of the transformed (i.e., recombinant) cell in such a manner that their ability to be expressed is retained.
The present invention also includes a recombinant vector which includes at least one MEKK protein nucleic acid molecule of the present invention inserted into any vector capable of delivering the nucleic acid molecule into a host cell. Such a vector contains heterologous nucleic acid sequences, for example nucleic acid sequences that are not naturally found adjacent to MEKK protein nucleic acid molecules of the present invention. The vector can be either RNA or DNA, and either prokaryotic or eukaryotic, and is typically a virus or a plasmid. Recombinant vectors can be used in the cloning, sequencing, and/or otherwise manipulating of MEKK protein nucleic acid molecules of the present invention. One type of recombinant vector, herein referred to as a recombinant molecule and described in more detail below, can be used in the expression of nucleic acid molecules of the present. invention. Preferred recombinant vectors are capable of replicating in the transformed cell.
Preferred nucleic acid molecules to insert into a recombinant vector includes a nucleic acid molecule that. encodes at least a portion of an MEKK protein, or a homologue thereof. A more preferred nucleic acid molecule to insert into a recombinant vector includes a nucleic acid molecule encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof. An even more preferred nucleic acid molecule to insert into a recombinant vector includes the nucleic acid molecule shown in the sequence listings incorporated by reference herien, or complements thereof.
Suitable host cells for transforming a cell can include any cell capable of producing MEKK proteins of the present invention after being transformed with at least one nucleic acid molecule of the present invention. Host cells can be either untransformed cells or cells that are already transformed with at least one nucleic acid molecule. Suitable host cells of the present invention can include bacterial, fungal (including yeast), insect, animal and plant cells. Preferred host cells include bacterial, yeast, insect and mammalian cells, with mammalian cells being particularly preferred.
A recombinant cell is preferably produced by transforming a host cell with one or more recombinant molecules, each comprising one or more nucleic acid molecules of the present invention operatively linked to an expression vector containing one or more transcription control sequences. The phrase operatively linked refers to insertion of a nucleic acid molecule into an expression vector in a manner such that the molecule is able to be expressed when transformed into a host cell. As used herein, an expression vector is a DNA or RNA vector that is capable of transforming a host cell and of effecting expression of a specified nucleic acid molecule.
Preferably, the expression vector is also capable of replicating within the host cell. Expression vectors can be either prokaryotic or eukaryotic, and are typically viruses or plasmids. Expression vectors of the present invention include any vectors that function (i.e., direct gene expression) in recombinant cells of the present invention, including in bacterial, fungal, insect, animal, and/or plant cells. As such, nucleic acid molecules of the present invention can be operatively linked to expression vectors containing regulatory sequences such as promoters, operators, repressors, enhancers, termination sequences, origins of replication, and other regulatory sequences that are compatible with the recombinant cell and that control the expression of nucleic acid molecules of the present invention. As used herein, a transcription control sequence includes a sequence which is capable of controlling the initiation, elongation, and termination of transcription. Particularly important transcription control sequences are those which control transcription initiation, such as promoter, enhancer, operator and repressor sequences. Suitable transcription control sequences include any transcription control sequence that can function in at least one of the recombinant cells of the present invention. A variety of such transcription control sequences are known to those skilled in the art. Preferred transcription control sequences include those which function in bacterial, yeast, and mammalian cells, such as, but not limited to, tac, lac, trp, trc, oxy-pro, omp/lpp, rrnB, bacteriophage lambda (λ) (such as λPL and λPR and fusions that include such promoters), bacteriophage T7, T7lac, bacteriophage T3, bacteriophage SP6, bacteriophage SPO1, metallothionein, alpha mating factor, baculovirus, vaccinia virus, herpesvirus, poxvirus, adenovirus, simian virus 40, retrovirus actin, retroviral long terminal repeat, Rous sarcoma virus, heat shock, phosphate and nitrate transcription control sequences, as well as other sequences capable of controlling gene expression in prokaryotic or eukaryotic cells. Additional suitable transcription control sequences include tissue-specific promoters and enhancers as well as lymphokine-inducible promoters (e.g., promoters inducible by interferons or interleukins). Transcription control sequences of the present invention can also include naturally occurring transcription control sequences naturally associated with a DNA sequence encoding an MEKK protein.
Preferred nucleic acid molecules for insertion into an expression vector include nucleic acid molecules that encode at least a portion of an MEKK protein, or a homologue thereof.
A more preferred nucleic acid molecule for insertion into an expression vector includes a nucleic acid molecule encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof.
Expression vectors of the present invention may also contain fusion sequences which lead to the expression of inserted nucleic acid molecules of the present invention as fusion proteins. Inclusion of a fusion sequence as part of an MEKK nucleic acid molecule of the present invention can enhance the stability during production, storage and/or use of the protein encoded by the nucleic acid molecule. Furthermore, a fusion segment can function as a tool to simplify purification of an MEKK protein, such as to enable purification of the resultant fusion protein using affinity chromatography. A suitable fusion segment can be a domain of any size that has the desired function (e.g., increased stability and/or purification tool). It is within the scope of the present invention to use one or more fusion segments. Fusion segments can be joined to amino and/or carboxyl termini of an MEKK protein. Linkages between fusion segments and MEKK proteins can be constructed to be susceptible to cleavage to enable straight-forward recovery of the MEKK proteins. Fusion proteins are preferably produced by culturing a recombinant cell transformed with a fusion nucleic acid sequence that encodes a protein including the fusion segment attached tc either the carboxyl and/or amino terminal end of an MEKK protein.
A recombinant cell of the present invention includes any cells transformed with at least one of any nucleic acid molecule of the present invention. A preferred recombinant cell is a cell transformed with at least one nucleic acid molecule that encodes at least a portion of an MEKK protein, or a homologue thereof. A more preferred recombinant cell is transformed with at least one nucleic acid molecule that is capable of encoding at least a portion of the amino acid sequence shown in the sequence listings incorporated by reference herein, or homologues thereof. An even more preferred recombinant cell is transformed with at least one nucleic acid molecule shown in the sequence listings incorporated by reference herein, or complements thereof. Particularly preferred recombinant cells include mammalian cells involved in a disease transformed with at least one of the aforementioned nucleic acid molecules. Methods to improve expression of transformed nucleic acid molecules are disclosed in U.S. Pat. No. 5,405,941, which is incorporated herein by this reference.
As used herein, amplifying the copy number of a nucleic acid sequence in a cell can be accomplished either by increasing the copy number of the nucleic acid sequence in the cell's genome or by introducing additional copies of the nucleic acid sequence into the cell by transformation. Copy number amplification is conducted in a manner such that greater amounts of enzyme are produced, leading to enhanced conversion of substrate to product. For example, recombinant molecules containing nucleic acids of the present invention can be transformed into cells to enhance enzyme synthesis. Transformation can be accomplished using any process by which nucleic acid sequences are inserted into a cell. Prior to transformation, the nucleic acid sequence on the recombinant molecule can be manipulated to encode an enzyme having a higher specific activity.
In accordance with the present invention, recombinant cells can be used to produce an MEKK protein of the present invention by culturing such cells under conditions effective to produce such a protein, and recovering the protein. Effective conditions to produce a protein include, but are not limited to, appropriate media, bioreactor, temperature, pH and oxygen conditions that permit protein production. An appropriate, or effective, medium refers to any medium in which a cell of the present invention, when cultured, is capable of producing an MEKK protein. Such a medium is typically an aqueous medium comprising assimilable carbohydrate, nitrogen and phosphate sources, as well as appropriate salts, minerals, metals and other nutrients, such as vitamins. The medium may comprise complex nutrients or may be a defined minimal medium.
Cells of the present invention can be cultured in conventional fermentation bioreactors, which include, but are. not limited to, batch, fed-batch, cell recycle, and continuous fermentors. Culturing can also be conducted in shake flasks, test tubes, microtiter dishes, and petri plates. Culturing is carried out at a temperature, pH and oxygen content appropriate for the recombinant cell. Such culturing conditions are well within the expertise of one of ordinary skill in the art.
Depending on the vector and host system used for production, resultant MEKK proteins may either remain within the recombinant cell or be secreted into the fermentation medium. The phrase "recovering the protein" refers simply to collecting the whole fermentation medium containing the protein and need not imply additional steps of separation or purification. MEKK proteins of the present invention can be purified using a variety of standard protein purification techniques, such as, but not limited to, affinity chromatography, ion exchange chromatography, filtration, electrophoresis, hydrophobic interaction chromatography, gel filtration chromatography, reverse phase chromatography, chromatofocusing and differential solubilization.
In addition, an MEKK protein of the present invention can be produced by isolating the MEKK protein from cells expressing the MEKK protein recovered from an animal. For example, a cell type, such as T cells, can be isolated from the thymus of an animal. MEKK protein can then be isolated from the isolated T cells using standard techniques described herein.
The present invention also includes a method to identify compounds capable of regulating signals initiated from a receptor on the surface of a cell, such signal regulation involving in some respect, MEKK protein. Such a method comprises the steps of: (a) contacting a cell containing an MEKK protein with a putative regulatory compound; (b) contacting the cell with a ligand capable of binding to a receptor on the surface of the cell; and (c) assessing the ability of the putative regulatory compound to regulate cellular signals by determining activation of a member of an MEKK-dependent pathway of the present invention. A preferred method to perform step (c) comprises measuring the phosphorylation of a member of an MEKK-dependent pathway. Such measurements can be performed using immunoassays having antibodies specific for phosphotyrosines, phosphoserines and/or phosphothreonines. Another preferred method to perform step (c) comprises measuring the ability of the MEKK protein to phosphorylate a substrate molecule comprising a protein including JEK, MEK1, MEK2, JNKK1, JNKK2, Raf-1, Ras-GAP and neurofibromin using methods described herein. Preferred substrates include JEK, MEK1, MEK2, JNKK1 and JNKK2. Yet another preferred method to perform step (c) comprises determining the ability of MEKK protein to bind to Ras protein. In particular, determining the ability of MEKK protein to bind to GST-RasV12 (GTPλS).
Putative compounds as referred to herein include, for example, compounds that are products of rational drug design, natural products and compounds having partially defined signal transduction regulatory properties. A putative compound can be a protein-based compound, a carbohydrate-based compound, a lipid-based compound, a nucleic acid-based compound, a natural organic compound, a synthetically derived organic compound, an anti-idiotypic antibody and/or catalytic antibody, or fragments thereof. A putative regulatory compound can be obtained, for example, from libraries of natural or synthetic compounds, in particular from chemical or combinatorial libraries (i.e., libraries of compounds that differ in sequence or size but that have the same building blocks; see for example, U.S. Pat. Nos. 5,010,175 and 5,266,684 of Rutter and Santi) or by rational drug design.
In another embodiment, a method to identify compounds capable of regulating signal transduction in a cell can comprise the steps of: (a) contacting a putative inhibitory compound with an MEKK protein to form a reaction mixture; (b) contacting the reaction mixture with MEK protein; and (c) assessing the ability of the putative inhibitory compound to inhibit phosphorylation of the NEK protein by the MEKK protein. The results obtained from step (c) can be compared with the ability of a putative inhibitory compound to inhibit the ability of Raf protein to phosphorylate MEK protein, to determine if the compound can selectively regulate signal transduction involving MEKK protein independent of Raf protein. MEKK, MEK and Raf proteins used in the foregoing methods can be recombinant proteins or naturally-derived proteins.
In another embodiment, a method to identify compounds capable of regulating signal transduction in a cell can comprise the steps of: (a) contacting a putative inhibitory compound with either an MEKK protein or a Ras protein, or functional equivalents thereof, to form a first reaction mixture; (b) combining the first reaction mixture with either Ras protein (or a functional equivalent thereof) if MEKK protein was used in the first reaction mixture, or MEKK protein (or a functional equivalent thereof) if Raf protein if MEKK protein was added to the first reaction mixture; and (c) assessing the ability of the putative inhibitory compound to inhibit the binding of the Ras protein to the MEKK protein. The lack of binding of the MEKK protein to the Ras protein indicates that the putative inhibitory compound is effective at inhibiting binding between MEKK and Ras. MEKK and Ras proteins used in the foregoing method can be recombinant proteins or naturally-derived proteins. Preferred Ras protein for use with the foregoing method includes, but is not limited to, GST-RasV12 (GTPλS). Preferred MEKK protein for use with the method includes recombinant MEKK protein. More preferred MEKK protein includes at least a portion of an MEKK protein having the kinase domain of MEKK. Even more preferred MEKK protein includes a protein encoded by p-MEKK1, MEKKCOOH and/or MEKKCOOH -His (as described in U.S. patent application Ser. No. 08/440,421.
The inhibition of binding of MEKK protein to Ras protein can be determined using a variety of methods known in the art. For example, immunoprecipitation assays can be performed to determine if MEKK and Ras co-precipitate. In addition, immunoblot assays can be performed to determine if MEKK and Ras co-migrate when resolved by gel electrophoresis. Another method to determine binding of MEKK to Ras comprises combining a substrate capable of being phosphorylated by MEKK protein with the Ras protein of the reaction mixture of step (b). In this method, Ras protein is separated from the reaction mixture of step (b) following incubation with MEKK protein. If MEKK protein is able to bind to the Ras, then the bound MEKK will be co-isolated with the Ras protein. The substrate is then added to the isolated Ras protein. Any co-isolated MEKK protein will phosphorylate the substrate. Thus, inhibition of binding between MEKK and Ras can be measured by determining the extent of phosphorylation of the substrate upon combination with the isolated Ras protein. The extent of phosphorylation can be determined using a variety of methods known in the art, including kinase assays using λ32 P!ATP.
Moreover, one can determine whether the site of inhibitory action along a particular signal transduction pathway involves both Raf and MEKK proteins by carrying out experiments set forth above (i.e., see discussion on MEKK- dependent pathways).
Another aspect of the present invention includes a kit to identify compounds capable of regulating signals initiated from a receptor on the surface of a cell, such signals involving in some respect, MEKK protein. Such kits include: (a) at least one cell containing NEKK protein; (b) a ligand capable of binding to a receptor on the surface of the cell; and (c) a means for assessing the ability of a putative regulatory compound to alter phosphorylation of the MEKK protein. Such a means for detecting phosphorylation include methods and reagents known to those of skill in the art, for example, phosphorylation can be detected using antibodies specific for phosphorylated amino acid residues, such as tyrosine, serine and threonine. Using such a kit, one is, capable of determining, with a fair degree of specificity, the location along a signal transduction pathway of particular pathway constituents, as well as the identity of the constituents involved in such pathway, at or near the site of regulation.
In another embodiment, a kit of the present invention can includes: (a) MEKK protein; (b) MEK protein; and (c) a means for assessing the ability of a putative inhibitory compound to inhibit phosphorylation of the MEK protein by the MEKK protein. A kit of the present invention can further comprise Raf protein and a means for detecting the ability of a putative inhibitory compound to inhibit the ability of Raf protein to phosphorylate the MEK protein.
Another aspect of the present invention relates to the treatment of an animal having a medical disorder that is subject to regulation or cure by manipulating a signal transduction pathway in a cell involved in the disorder. Such medical disorders include disorders which result from abnormal cellular growth or abnormal production of secreted cellular products. In particular, such medical disorders include, but are not limited to, cancer, autoimmune disease, inflammatory responses, allergic responses and neuronal disorders, such as Parkinson's disease and Alzheimer's disease. Preferred cancers subject to treatment using a method of the present invention include, but are not limited to, small cell carcinomas, non-small cell lung carcinomas with overexpressed. EGF receptors, breast cancers with overexpressed EGF or Neu receptors, tumors having overexpressed growth factor receptors of established autocrine loops and tumors having overexpressed growth factor receptors of established paracrine loops. According to the present invention, the term treatment can refer to the regulation of the progression of a medical disorder or the complete removal of a medical disorder (e.g., cure). Treatment of a medical disorder can comprise regulating the signal transduction activity of a cell in such a manner that a cell involved in the medical disorder no longer responds to extracellular stimuli (e.g., growth factors or cytokines), or the killing of a cell involved in the medical disorder through cellular apoptosis.
One aspect of the present invention involves the recognition that an MEKK protein of the present invention is capable of regulating the homeostasis of a cell by regulating cellular activity such as cell growth cell death, and cell function (e.g., secretion of cellular products). Such regulation, in most cases, is independent of Raf, however, as discussed above, some pathways capable of regulation by MEKK protein may be subject to upstream regulation by Raf protein. Therefore, it is within the scope of the present invention to either stimulate or inhibit the activity of Raf protein and/or MEKK protein to achieve desired regulatory results. Without being bound by theory, it is believed that the regulation of Raf protein and MEKK protein activity at the divergence point from Ras protein can be controlled by a "2-hit" mechanism. For example, a first "hit" can comprise any means of stimulating Ras protein, thereby stimulating a Ras-dependent pathway, including, for example, contacting a cell with a growth factor which is capable of binding to a cell surface receptor in such a manner that Ras protein is activated. Following activation of Ras protein, a second "hit" can be delivered that is capable of increasing the activity of JNK activity compared with MAPK activity, or vice versa. A second "hit" can include, but is not limited to, regulation of JNK or MAPK activity by compounds capable of stimulating or inhibiting the activity of MEKK, JEK, Raf and/or MEK. For example, compounds such as protein kinase C or phospholipase C kinase, can provide the second "hit" needed to drive the divergent Ras-dependent pathway down the MEKK-dependent pathway in such a manner that JNK is preferentially activated over MAPK.
One embodiment of the present invention comprises a method for regulating the homeostasis of a cell comprising regulating the activity of an MEKK-dependent pathway relative to the activity of a Raf-dependent pathway in the cell. As used herein, the term "homeostasis" refers to the tendency of a cell to maintain a normal state using intracellular systems such as signal transduction pathways. Regulation of the activity of an MEKK-dependent pathway includes increasing the activity of an MEKK-dependent pathway relative to the activity of a Raf-dependent pathway by regulating the activity of a member of an MEKK-dependent pathway, a member of a Raf-dependent pathway, and combinations thereof, to achieve desired regulation of phosphorylation along a given pathway, and thus effect apoptosis. Preferred regulated members of an MEKK-dependent pathway or a Raf-dependent pathway to regulate include, but are not limited to, proteins including MEKK, Ras, Raf, JEK, MEK, MAPK, JNK, TCF, ATF-2, Jun and Myc, and combinations thereof.
In one embodiment, the activity of a member of an MEKK-dependent pathway, a member of a Raf-dependent pathway, and combinations thereof, are regulated by altering the concentration of such members in a cell. One preferred regulation scheme involves altering the concentration of proteins including MEKK, Ras, Raf, JEK, MEK, MAPK, JNK, TCF, Jun, ATF-2, and Myc, and combinations thereof. A more preferred regulation scheme involves increasing the concentration of proteins including MEKK, Ras, JEK, JNK, Jun, ATF-2, and Myc, and combinations thereof. Another more preferred regulation scheme involves decreasing the concentration of proteins including Raf, MEK, MAPK, and TCF, and combinations thereof. It is also within the scope of the present invention that the regulation of protein concentrations in two or more of the foregoing regulation schemes can be combined to achieve an optimal apoptotic effect in a cell.
A preferred method for increasing the concentration of a protein in a regulation scheme of the present invention includes, but is not limited to, increasing the copy number of a nucleic acid sequence encoding such protein within a cell, improving the efficiency with which the nucleic acid sequence encoding such protein is transcribed within a cell, improving the efficiency with which a transcript is translated into such a protein, improving the efficiency of post-translational modification of such protein, contacting cells capable of producing such protein with anti-sense nucleic acid sequences, and combinations thereof.
In a preferred embodiment of the present invention, the homeostasis of a cell is controlled by regulating the apoptosis of a cell. A suitable method for regulating the apoptosis of a cell is to regulate the activity of an MEKK- dependent pathway in which the MEKK protein regulates the pathway substantially independent of Raf. A particularly preferred method for regulating the apoptosis of a cell comprises increasing the concentration of MEKK protein by contacting a cell with a nucleic acid molecule encoding an MEKK protein that possesses unregulated kinase activity. A preferred nucleic acid molecule with which to contact a cell includes a nucleic acid molecule encoding the MEKK protein shown in the sequence listings incorporated by reference herein, and combinations thereof. A more preferred nucleic acid molecule with which to contact a cell includes a nucleic acid molecule encoding a truncated MEKK protein having only the kinase catalytic domain (i.e., no regulatory domain) of the MEKK protein shown in the sequence listings incorporated by reference herein. Again, suitable variation of an MEKK protein described herein comprises a protein encoded by a nucleic acid molecule that are able to hybridize to any of the above sequences under stringent conditions.
It is within the scope of the invention that the foregoing method can further comprise the step of decreasing the activity of MEK protein in the cell by contacting the cell with a compound capable of inhibiting MEK activity. Such compounds can include: peptides capable of binding to the kinase domain of MEK in such a manner that phosphorylation of MAPK protein by the MEK protein is inhibited; and/or peptides capable of binding to a portion of a MAPK protein in such a manner that phosphorylation of the MAPK protein is inhibited.
In another embodiment, the activity of a member of an MEKK-dependent pathway, a member of a Raf-dependent pathway, and combinations thereof, can be regulated by directly altering the activity of such members in a cell. A preferred method for altering the activity of a member of an MEKK-dependent pathway, includes, but is not limited to, contacting a cell with a compound capable of directly interacting with a protein including MEKK, Ras, JEK, JNK, Jun, ATF-2, and Myc, and combinations thereof, in such a manner that the proteins are activated; and/or contacting a cell with a compound capable of directly interacting with a protein including Raf, MEK, MAPK, TCF protein, and combinations thereof in such a manner that the activity of the proteins are inhibited. A preferred compound with which to contact a cell that is capable of regulating a member of an MEKK-dependent pathway includes a peptide capable of binding to the regulatory domain of proteins including MEKK, Ras, JEK, JNK, Jun, ATF-2, and Myc, in which the peptide inhibits the ability of the regulatory domain to regulate the activity of the kinase domains of such proteins. Another preferred compound with which to contact a cell includes TNFα, growth factors regulating tyrosine kinases, hormones regulating G protein-coupled receptors and FAS ligand.
A preferred compound with which to contact a cell that is capable of regulating a member of a Raf-dependent pathway includes a peptide capable of binding to the kinase catalytic domain of a protein selected from the group consisting of Raf, MEK-1, MEK-2, MAPK, and TCF, in which the peptide inhibits the ability of the protein to be phosphorylated or to phosphorylate a substrate.
In accordance with the present invention, a compound can regulate the activity of a member of an MEKK-dependent pathway by affecting the ability of one member of the pathway to bind to another member of the pathway. Inhibition of binding can be achieved by directly interfering at the binding site of either member, or altering the conformational structure, thereby precluding the binding between one member and another member.
Another preferred compound with which to contact a cell that is capable of regulating a member of an MEKK-dependent pathway includes an isolated compound that is capable of regulating the binding of MEKK protein to Ras protein (referred to herein as a Ras:MEKK binding compound). In one embodiment, a Ras:MEKK binding compound of the present invention comprises an isolated peptide (or mimetope thereof) comprising an amino acid sequence derived from a Ras protein. In another embodiment, a Ras:MEKK binding compound of the present invention comprises an isolated peptide (or mimetope thereof) comprising an amino acid sequence derived from an MEKK protein. According to the present invention, an isolated, or biologically pure, peptide, is a peptide that has been removed from its natural milieu. As such, "isolated" and "biologically pure" do not necessarily reflect the extent to which the protein has been purified. An isolated compound of the present invention can be obtained from a natural source or produced using recombinant DNA technology or chemical synthesis. As used herein, an isolated peptide can be a full-length protein or any homolog of such a protein in which amino acids have been deleted (e.g., a truncated version of the protein), inserted, inverted, substituted and/or derivatized (e.g., by glycosylation, phosphorylation, acetylation, myristylation, prenylation, palmitilation, and/or amidation) such that the peptide is capable of regulating the binding of Ras protein to MEKK protein.
In accordance with the present invention, a "mimetope" refers to any compound that is able to mimic the ability of an isolated compound of the present invention. A mimetope can be a peptide that has been modified to decrease its susceptibility to degradation but that still retain regulatory activity. Other examples of mimetopes include, but are not limited to, protein-based compounds, carbohydrate-based compounds, lipid-based compounds, nucleic acid-based compounds, natural organic compounds, synthetically derived organic compounds, anti-idiotypic antibodies and/or catalytic antibodies, or fragments thereof. A mimetope can be obtained by, for example, screening libraries of natural and synthetic compounds as disclosed herein that are capable of inhibiting the binding of Ras to MEKK. A mimetope can also be obtained by, for example, rational drug design. In a rational drug design procedure, the three-dimensional structure of a compound of the present invention can be analyzed by, for example, nuclear magnetic resonance (NMR) or x-ray crystallography. The three-dimensional structure can then be used to predict structures of potential mimetopes by, for example, computer modelling. The predicted mimetope structures can then be produced by, for example, chemical synthesis, recombinant DNA technology, or by isolating a mimetope from a natural source (e.g., plants, animals, bacteria and fungi).
In one embodiment, a Ras:MEKK binding compound of the present invention comprises an isolated peptide having a domain of a Ras protein that is capable of binding to an MEKK protein (i.e., that has an amino acid sequence which enables the peptide to be bound by an MEKK protein). A Ras peptide of the present invention is of a size that enables the peptide to be bound by an MEKK protein, preferably, at least about 4 amino acid residues, more preferably at least about 12 amino acid residues, and even more preferably at least about 25 amino acid residues. In particular, a Ras peptide of the present invention is capable of being bound by the COOH-terminal region of MEKK, preferably the region of MEKK containing the MEKK kinase domain. Preferably, a Ras peptide of the present invention comprises the effector domain of Ras and more preferably amino acid residues 17-42 of H-Ras.
In another embodiment, a Ras:MEKK binding compound of the present invention comprises an isolated MEKK peptide that has a domain of an MEKK protein that is capable of binding to a Ras protein (i.e., that has an amino acid sequence which enables the peptide to be bound by a Ras protein). An MEKK peptide of the present invention is of a size that enables the peptide to be bound by a Ras protein, in particular by the effector domain of a Ras protein. Preferably, an MEKK peptide of the present invention at least about 320 amino acids in length. Preferably, an MEKK peptide of the present invention comprises the COOH-terminal region of an MEKK protein and more preferably MEKKCOOH (as described in U.S. patent application Ser. No. 08/440,421.
Ras is a critical component of tyrosine kinase growth factor receptor and G-protein coupled receptor regulation of signal transduction pathways controlling mitogenesis and differentiation. According to the present invention, the protein serine-threonine kinases Raf-1 and MEKK1 are Ras effectors and selectively bind to Ras in a GTP dependent manner. The p110 catalytic subunit of the lipid kinase has also been shown to directly interact with Ras in a GTP dependent manner. Ras-GAP and neurofibromin also regulate Ras GTPase activity. Raf-1, MEKK1 and PI3-kinase are capable of increasing the activity in cells expressing GTPase-deficient Ras consistent with their interaction with Ras-GTP being involved in their regulation.
Different functional domains of Ras effectors bind to Ras in a GTP dependent manner. The Ras binding domain for Raf-1 is encoded in the extreme NH2 -terminal regulatory domain of Raf-1. The Ras binding domain is encoded within the catalytic domain of MEKK1. Both Raf-1 and MEKK1 binding to Ras is blocked by a Ras effector domain peptide. Thus, Raf-1, MEKK1 and other Ras effectors can compete for interaction with Ras-GTP presumably at the Ras effector domain. The relative abundance and affinity of each Ras effector in different cells may influence the magnitude, onset and duration of each effector response. Secondary inputs, such as phosphorylation of the different Ras effectors, can also influence their interaction with Ras-GTP. The kinetic properties of Ras effector activation in cells relative to effector affinity for Ras-GTP are predictable based on the foregoing information. For example, MEKKl can preferentially regulate the SEK/Jun kinase pathways relative to MAPK. Activation of the SEK/Jun kinase pathway is generally slower in onset and maintained as maximal activity longer than the activation of MAPK. As additional MEKKs are characterized it will be important to characterize their regulation and interaction with Ras-GTP. Undoubtedly additional Ras effectors will be identified in the near future.
The present invention also includes a method to administer isolated compounds of the present invention to a cell to regulate signal transduction activity in the cell. In particular, the present invention includes a method to administer an isolated compound of the present invention to a cell to regulate apoptosis of the cell.
The present invention also includes a method for regulating the homeostasis of a cell comprising injecting an area of a subject's body with an effective amount of a naked plasmid DNA compound (such as is taught, for example in Wolff et al., 1990, Science 247, 1465-1468). A naked plasmid DNA compound comprises a nucleic acid molecule encoding an MEKK protein of the present invention, operatively linked to a naked plasmid DNA vector capable of being taken up by and expressed in a recipient cell located in the body area. A preferred naked plasmid DNA compound of the present invention comprises a nucleic acid molecule encoding a truncated MEKK protein having deregulated kinase activity. Preferred naked plasmid DNA vectors of the present invention include those known in the art. When administered to a subject, a naked plasmid DNA compound of the present invention transforms cells within the subject and directs the production of at least a portion of an MEKK protein or RNA nucleic acid molecule that is capable of regulating the apoptosis of the cell.
A naked plasmid DNA compound of the present invention is capable of treating a subject suffering from a medical disorder including cancer, autoimmune disease, inflammatory responses, allergic responses and neuronal disorders, such as Parkinson's disease and Alzheimer's disease. For example, a naked plasmid DNA compound can be administered as an anti- tumor therapy by injecting an effective amount of the plasmid directly into a tumor so that the plasmid is taken up and expressed by a tumor cell, thereby killing the tumor cell. As used herein, an effective amount of a naked plasmid DNA to administer to a subject comprises an amount needed to regulate or cure a medical disorder the naked plasmid DNA is intended to treat, such mode of administration, number of doses and frequency of dose capable of being decided upon, in any given situation, by one of skill in the art without resorting to undue experimentation.
One aspect of the present invention relates to the recognition that an MEKK protein is capable of activating MAPK and that MAPK can regulate various cellular functions as disclosed in U.S. Pat. No. 5,405,941, which is incorporated herein by this reference.
An isolated compound of the present invention can be used to formulate a therapeutic composition. In one embodiment, a therapeutic composition of the present invention includes at least one isolated peptide of the present invention. A therapeutic composition of the present invention can further comprise suitable excipients. A therapeutic composition of the present invention can be formulated in an excipient that the subject to be treated can tolerate. Examples of such excipients include water, saline, Ringer's solution, dextrose solution, Hank's solution, and other aqueous physiologically balanced salt solutions. Nonaqueous vehicles, such as fixed oils, sesame oil, ethyl oleate, or triglycerides may also be used. Other useful excipients include suspensions containing viscosity enhancing agents, such as sodium carboxymethylcellulose, sorbitol, or dextran. Excipients can also contain minor amounts of additives, such as substances that enhance isotonicity and chemical stability. Examples of buffers include phosphate buffer, bicarbonate buffer and Tris buffer, while examples of preservatives include thimerosal, m-or o-cresol, formalin and benzyl alcohol. Standard formulations can either be liquid injectables or solids which can be taken up in a suitable liquid as a suspension or solution for injection. Thus, in a non-liquid formulation, the excipient can comprise dextrose, human serum albumin, preservatives, etc., to which sterile water or saline can be added prior to administration.
In another embodiment, a therapeutic composition can also comprise a carrier. Carriers are typically compounds that increase the half-life of a therapeutic composition in the treated animal. Suitable carriers include, but are not limited to, liposomes, micelles, cells, polymeric controlled release formulations, biodegradable implants, bacteria, viruses, oils, esters, and glycols. Preferred carriers include liposomes and micelles.
A therapeutic composition of the present invention can be administered to any subject having a medical disorder as herein described. Acceptable protocols by which to administer therapeutic compounds of the present invention in an effective manner can vary according to individual dose size, number of doses, frequency of dose administration, and mode of administration. Determination of such protocols can be accomplished by those skilled in the art without resorting to undue experimentation. An effective dose refers to a dose capable of treating a subject for a medical disorder as described herein. Effective doses can vary depending upon, for example, the therapeutic composition used, the medical disorder being treated, and the size and type of the recipient animal. Effective doses to treat a subject include doses administered over time that are capable of regulating the activity, including growth, of cells involved in a medical disorder. For example, a first dose of a naked plasmid DNA compound of the present invention can comprise an amount of that causes a tumor to decrease in size by about 10% over 7 days when administered to a subject having a tumor. A second dose can comprise at least the same the same therapeutic compound than the first dose.
Another aspect of the present invention includes a method for prescribing treatment for subjects having a medical disorder as described herein. A preferred method for prescribing treatment comprises: (a) measuring the MEKK protein activity in a cell involved in the medical disorder to determine if the cell is susceptible to treatment using a method of the present invention; and (b) prescribing treatment comprising regulating the activity of an MEKK-dependent pathway relative to the activity of a Raf-dependent pathway in the cell to induce the apoptosis of the cell. The step of measuring MEKK protein activity can comprise: (1) removing a sample of cells from a subject; (2) stimulating the cells with a TNFα; and (3) detecting the state of phosphorylation of JEK protein using an immunoassay using antibodies specific for phosphothreonine and/or phosphoserine.
The present invention also includes antibodies capable of selectively binding to an MEKK protein of the present invention. Such an antibody is herein referred to as an anti-MEKK antibody. Polyclonal populations of anti-MEKK antibodies can be contained in an MEKK antiserum. MEKK antiserum can refer to affinity purified polyclonal antibodies, ammonium sulfate cut antiserum or whole antiserum. As used herein, the term "selectively binds to" refers to the ability of such an antibody to preferentially bind to MEKK proteins. Binding can be measured using a variety of methods known to those skilled in the art including immunoblot assays, immunoprecipitation assays, enzyme immunoassays (e.g., ELISA), radioimmunoassays, immunofluorescent antibody assays and immunoelectron microscopy; see, for example, Sambrook et al., Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Labs Press, 1989.
Antibodies of the present invention can be either polyclonal or monoclonal antibodies and can be prepared using techniques standard in the art. Antibodies of the present invention include functional equivalents such as antibody fragments and genetically-engineered antibodies, including single chain antibodies, that are capable of selectively binding to at least one of the epitopes of the protein used to obtain the antibodies. Preferably, antibodies are raised in response to proteins that are encoded, at least in part, by a MEKK nucleic acid molecule. More preferably antibodies are raised in response to at least a portion of an MEKK protein, and even more preferably antibodies are raised in response to either the amino terminus or the carboxyl terminus of an MEKK protein. Preferably, an antibody of the present invention has a single site binding affinity of from about 103 M-1 to about 1012 M-1 for an MEKK protein of the present invention.
A preferred method to produce antibodies of the present invention includes administering to an animal an effective amount of an MEKK protein to produce the antibody and recovering the antibodies. Antibodies of the present invention have a variety of potential uses that are within the scope of the present invention. For example, such antibodies can be used to identify unique MEKK proteins and recover MEKK proteins.
Another aspect of the present invention comprises a therapeutic compound capable of regulating the activity of an MEKK-dependent pathway in a cell identified by a process, comprising: (a) contacting a cell with a putative regulatory molecule; and (b) determining the ability of the putative regulatory compound to regulate the activity of an MEKK-dependent pathway in the cell by measuring the activation of at least one member of said MEKK-dependent pathway. Preferred methods to measure the activation of a member of an MEKK-dependent pathway include measuring the transcription regulation activity of c-Myc protein, measuring the phosphorylation of a protein selected from the group consisting of MEKK, JEK, JNK, Jun, ATF-2, Myc, and combinations thereof.
Mitogen-activated protein kinase kinase (MEKK1) is a serine/threonine protein kinase that functions parallel to Raf-1 in the regulation of sequential protein kinase pathways that involve both mitogen-activated and stress-activated protein kinases. In this study, we examined the interaction of MEKK1 with 14-3-3 proteins. The T cell 14-3-3 isoform, but not the β and stratifin isoforms, interacted with MEKK1 in the two-hybrid system. We also prepared GST fusion proteins of the T cell, β, and stratifin 14-3-3 isoforms to further characterize the domains of MEKK1 and Raf-1 that interact with these proteins. We demonstrate that the T cell and β 14-3-3 isoform, but not stratifin, interact with COS cell-expressed MEKK1. Furthermore, the amino-terminal moiety, but not the carboxyl-terminal moiety, of expressed MEKK1 interacts with the GST•14-3-3 although the interaction is best when holoMEKK1 is expressed. In contrast, GST•14-3-3 proteins interact with both the amino- and carboxyl-regions of COS cell-expressed Raf-1 protein. Thus, although MEKK1 and Raf-1 function at a parallel point in the sequential protein kinase pathways, the interaction of 14-3-3 proteins with these kinases is not identical, suggesting a differential regulation between Raf-1 and MEKK1-stimulated pathways.
Examples related to the present invention are incorporated by this reference in their entirety as taught in U.S. Pat. No. 5,405,941 PCT Patent Application No. 94/04178, and U.S. patent application Ser. Nos. 08/323,460 and 08/440,421.
The foregoing description of the invention has been presented for purposes of illustration and description. Further, the description is not intended to limit the invention to the form disclosed herein. Consequently, variations and modifications commensurate with the above teachings, and the skill or knowledge in the relevant art are within the scope of the present invention. The preferred embodiment described herein above is further intended to explain the best mode known of practicing the invention and to enable others skilled in the art to utilize the invention in various embodiments and with various modifications required by their particular applications or uses of the invention. It is intended that the appended claims be construed to include alternate embodiments to the extent permitted by the prior art.
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SEQUENCE LISTING                                                          
(1) GENERAL INFORMATION:                                                  
(iii) NUMBER OF SEQUENCES: 12                                             
(2) INFORMATION FOR SEQ ID NO:1:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 3260 base pairs                                               
(B) TYPE: nucleic acid                                                    
(C) STRANDEDNESS: double                                                  
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: cDNA                                                  
(iii) HYPOTHETICAL: NO                                                    
(iv) ANTI-SENSE: NO                                                       
(vi) ORIGINAL SOURCE:                                                     
(A) ORGANISM: MEKK                                                        
(B) STRAIN: murine                                                        
(vii) IMMEDIATE SOURCE:                                                   
(A) LIBRARY: mouse liver                                                  
(B) CLONE: MEKK cDNA                                                      
(ix) FEATURE:                                                             
(A) NAME/KEY: 5'UTR                                                       
(B) LOCATION: 1..485                                                      
(A) NAME/KEY: CDS                                                         
(B) LOCATION: 486..2501                                                   
(A) NAME/KEY: 3'UTR                                                       
(B) LOCATION: 2502..3260                                                  
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:1:                                   
TACACTCCTTGCCACAGTCTGGCAGAAAGAATCAAACTTCAGAGACTCCTCCGGCCAGTT60            
GTAGACACTATCCTTGTCAAGTGTGCAGATCCAACAGCCGCACGAGTCAGCTGTCCATAT120           
CTACAGTGCTGGAACTCTGCAAGGGCCAAGCAGGAGAGCTGGCGGTTGGGAGAGAAATAC180           
TTAAAGCTGGGTCCATCGGGGTTGGTGGTGTCGATTACGTCTTAAGTTGTATCCTTGGAA240           
ACCAAGCTGAATCAAACAACTGGCAAGAACTGCTGGGTCGCCTCTGTCTTATAGACAGGT300           
TGCTGTTGGAATTTCCTGCTGAATTCTATCCTCATATTGTCAGTACTGATGTCTCACAAG360           
CTGAGCCTGTTGAAATCAGGTACAAGAAGCTGCTCTCCCTCTTAACCTTTGCCTTGCAAT420           
CCATTGACAATTCCCACTCGATGGTTGGCAAGCTCTCTCGGAGGATATATCTGAGCTCTG480           
CCAGGATGGTGACCGCAGTGCCCGCTGTGTTTTCCAAGCTGGTAACC527                        
MetValThrAlaValProAlaValPheSerLysLeuValThr                                
1510                                                                      
ATGCTTAATGCTTCTGGCTCCACCCACTTCACCAGGATGCGCCGGCGT575                       
MetLeuAsnAlaSerGlySerThrHisPheThrArgMetArgArgArg                          
15202530                                                                  
CTGATGGCTATCGCGGATGAGGTAGAAATTGCCGAGGTCATCCAGCTG623                       
LeuMetAlaIleAlaAspGluValGluIleAlaGluValIleGlnLeu                          
354045                                                                    
GGTGTGGAGGACACTGTGGATGGGCATCAGGACAGCTTACAGGCCGTG671                       
GlyValGluAspThrValAspGlyHisGlnAspSerLeuGlnAlaVal                          
505560                                                                    
GCCCCCACCAGCTGTCTAGAAAACAGCTCCCTTGAGCACACAGTCCAT719                       
AlaProThrSerCysLeuGluAsnSerSerLeuGluHisThrValHis                          
657075                                                                    
AGAGAGAAAACTGGAAAAGGACTAAGTGCTACGAGACTGAGTGCCAGC767                       
ArgGluLysThrGlyLysGlyLeuSerAlaThrArgLeuSerAlaSer                          
808590                                                                    
TCGGAGGACATTTCTGACAGACTGGCCGGCGTCTCTGTAGGACTTCCC815                       
SerGluAspIleSerAspArgLeuAlaGlyValSerValGlyLeuPro                          
95100105110                                                               
AGCTCAACAACAACAGAACAACCAAAGCCAGCGGTTCAAACAAAAGGC863                       
SerSerThrThrThrGluGlnProLysProAlaValGlnThrLysGly                          
115120125                                                                 
AGACCCCACAGTCAGTGTTTGAACTCCTCCCCTTTGTCTCATGCTCAA911                       
ArgProHisSerGlnCysLeuAsnSerSerProLeuSerHisAlaGln                          
130135140                                                                 
TTAATGTTCCCAGCACCATCAGCCCCTTGTTCCTCTGCCCCGTCTGTC959                       
LeuMetPheProAlaProSerAlaProCysSerSerAlaProSerVal                          
145150155                                                                 
CCAGATATTTCTAAGCACAGACCCCAGGCATTTGTTCCCTGCAAAATA1007                      
ProAspIleSerLysHisArgProGlnAlaPheValProCysLysIle                          
160165170                                                                 
CCTTCCGCATCTCCTCAGACACAGCGCAAGTTCTCTCTACAATTCCAG1055                      
ProSerAlaSerProGlnThrGlnArgLysPheSerLeuGlnPheGln                          
175180185190                                                              
AGGAACTGCTCTGAACACCGAGACTCAGACCAGCTCTCCCCAGTCTTC1103                      
ArgAsnCysSerGluHisArgAspSerAspGlnLeuSerProValPhe                          
195200205                                                                 
ACTCAGTCAAGACCCCCACCCTCCAGTAACATACACAGGCCAAAGCCA1151                      
ThrGlnSerArgProProProSerSerAsnIleHisArgProLysPro                          
210215220                                                                 
TCCCGACCCGTTCCGGGCAGTACAAGCAAACTAGGGGACGCCACAAAA1199                      
SerArgProValProGlySerThrSerLysLeuGlyAspAlaThrLys                          
225230235                                                                 
AGTAGCATGACACTTGATCTGGGCAGTGCTTCCAGGTGTGACGACAGC1247                      
SerSerMetThrLeuAspLeuGlySerAlaSerArgCysAspAspSer                          
240245250                                                                 
TTTGGCGGCGGCGGCAACAGTGGCAACGCCGTCATACCCAGCGACGAG1295                      
PheGlyGlyGlyGlyAsnSerGlyAsnAlaValIleProSerAspGlu                          
255260265270                                                              
ACAGTGTTCACGCCGGTGGAGGACAAGTGCAGGTTAGATGTGAACACC1343                      
ThrValPheThrProValGluAspLysCysArgLeuAspValAsnThr                          
275280285                                                                 
GAGCTCAACTCCAGCATCGAGGACCTTCTTGAAGCATCCATGCCTTCA1391                      
GluLeuAsnSerSerIleGluAspLeuLeuGluAlaSerMetProSer                          
290295300                                                                 
AGTGACACGACAGTCACTTTCAAGTCCGAAGTCGCCGTCCTCTCTCCG1439                      
SerAspThrThrValThrPheLysSerGluValAlaValLeuSerPro                          
305310315                                                                 
GAAAAGGCCGAAAATGACGACACCTACAAAGACGACGTCAATCATAAT1487                      
GluLysAlaGluAsnAspAspThrTyrLysAspAspValAsnHisAsn                          
320325330                                                                 
CAAAAGTGCAAAGAAAAGATGGAAGCTGAAGAGGAGGAGGCTTTAGCG1535                      
GlnLysCysLysGluLysMetGluAlaGluGluGluGluAlaLeuAla                          
335340345350                                                              
ATCGCCATGGCGATGTCAGCGTCTCAGGATGCCCTCCCCATCGTCCCT1583                      
IleAlaMetAlaMetSerAlaSerGlnAspAlaLeuProIleValPro                          
355360365                                                                 
CAGCTGCAGGTGGAAAATGGAGAAGATATTATCATCATTCAGCAGGAC1631                      
GlnLeuGlnValGluAsnGlyGluAspIleIleIleIleGlnGlnAsp                          
370375380                                                                 
ACACCAGAAACTCTTCCAGGACATACCAAAGCGAAACAGCCTTACAGA1679                      
ThrProGluThrLeuProGlyHisThrLysAlaLysGlnProTyrArg                          
385390395                                                                 
GAAGACGCTGAGTGGCTGAAAGGCCAGCAGATAGGCCTCGGAGCATTT1727                      
GluAspAlaGluTrpLeuLysGlyGlnGlnIleGlyLeuGlyAlaPhe                          
400405410                                                                 
TCTTCCTGTTACCAAGCACAGGATGTGGGGACTGGGACTTTAATGGCT1775                      
SerSerCysTyrGlnAlaGlnAspValGlyThrGlyThrLeuMetAla                          
415420425430                                                              
GTGAAACAGGTGACGTACGTCAGAAACACATCCTCCGAGCAGGAGGAG1823                      
ValLysGlnValThrTyrValArgAsnThrSerSerGluGlnGluGlu                          
435440445                                                                 
GTGGTGGAAGCGTTGAGGGAAGAGATCCGGATGATGGGTCACCTCAAC1871                      
ValValGluAlaLeuArgGluGluIleArgMetMetGlyHisLeuAsn                          
450455460                                                                 
CATCCAAACATCATCCGGATGCTGGGGGCCACGTGCGAGAAGAGCAAC1919                      
HisProAsnIleIleArgMetLeuGlyAlaThrCysGluLysSerAsn                          
465470475                                                                 
TACAACCTCTTCATTGAGTGGATGGCGGGAGGATCTGTGGCTCACCTC1967                      
TyrAsnLeuPheIleGluTrpMetAlaGlyGlySerValAlaHisLeu                          
480485490                                                                 
TTGAGTAAATACGGAGCTTTCAAGGAGTCAGTCGTCATTAACTACACT2015                      
LeuSerLysTyrGlyAlaPheLysGluSerValValIleAsnTyrThr                          
495500505510                                                              
GAGCAGTTACTGCGTGGCCTTTCCTATCTCCACGAGAACCAGATCATT2063                      
GluGlnLeuLeuArgGlyLeuSerTyrLeuHisGluAsnGlnIleIle                          
515520525                                                                 
CACAGAGACGTCAAAGGTGCCAACCTGCTCATTGACAGCACCGGTCAG2111                      
HisArgAspValLysGlyAlaAsnLeuLeuIleAspSerThrGlyGln                          
530535540                                                                 
AGGCTGAGAATTGCAGACTTTGGAGCTGCTGCCAGGTTGGCATCAAAA2159                      
ArgLeuArgIleAlaAspPheGlyAlaAlaAlaArgLeuAlaSerLys                          
545550555                                                                 
GGAACCGGTGCAGGAGAGTTCCAGGGACAGTTACTGGGGACAATTGCA2207                      
GlyThrGlyAlaGlyGluPheGlnGlyGlnLeuLeuGlyThrIleAla                          
560565570                                                                 
TTCATGGCGCCTGAGGTCCTAAGAGGTCAGCAGTATGGTAGGAGCTGT2255                      
PheMetAlaProGluValLeuArgGlyGlnGlnTyrGlyArgSerCys                          
575580585590                                                              
GATGTATGGAGTGTTGGCTGCGCCATTATAGAAATGGCTTGTGCAAAA2303                      
AspValTrpSerValGlyCysAlaIleIleGluMetAlaCysAlaLys                          
595600605                                                                 
CCACCTTGGAATGCAGAAAAACACTCCAATCATCTCGCCTTGATATTT2351                      
ProProTrpAsnAlaGluLysHisSerAsnHisLeuAlaLeuIlePhe                          
610615620                                                                 
AAGATTGCTAGCGCAACTACTGCACCGTCCATCCCGTCACACCTGTCC2399                      
LysIleAlaSerAlaThrThrAlaProSerIleProSerHisLeuSer                          
625630635                                                                 
CCGGGTCTGCGCGACGTGGCCGTGCGCTGCTTAGAACTTCAGCCTCAG2447                      
ProGlyLeuArgAspValAlaValArgCysLeuGluLeuGlnProGln                          
640645650                                                                 
GACCGGCCTCCGTCCAGAGAGCTGCTGAAACATCCGGTCTTCCGTACC2495                      
AspArgProProSerArgGluLeuLeuLysHisProValPheArgThr                          
655660665670                                                              
ACGTGGTAGTTAATTGTTCAGATCAGCTCTAATGGAGACAGGATATCGAACCGGGA2551              
ThrTrp                                                                    
GAGAGAAAAGAGAACTTGTGGGCGACCATGCCGCTAACCGCAGCCCTCACGCCACTGAAC2611          
AGCCAGAAACGGGGCCAGCGGGGAACCGTACCTAAGCATGTGATTGACAAATCATGACCT2671          
GTACCTAAGCTCGATATGCAGACATCTACAGCTCGTGCAGGAACTGCACACCGTGCCTTT2731          
CACAGGACTGGCTCTGGGGGACCAGGAAGGCGATGGAGTTTGCATGACTAAAGAACAGAA2791          
GCATAAATTTATTTTTGGAGCACTTTTTCAGCTAATCAGTATTACCATGTACATCAACAT2851          
GCCCGCCACATTTCAAACTCAGACTGTCCCAGATGTCAAGATCCACTGTGTTTGAGTTTG2911          
TTTGCAGTTCCCTCAGCTTGCTGGTAATTGTGGTGTTTTGTTTTCGATGCAAATGTGATG2971          
TAATATTCTTATTTTCTTTGGATCAAAGCTGGACTGAAAATTGTACTGTGTAATTATTTT3031          
TGTGTTTTTAATGTTATTTGGTACTCGAATTGTAAATAACGTCTACTGCTGTTTATTCCA3091          
GTTTCTACTACCTCAGGTGTCCTATAGATTTTTCTTCTACCAAAGTTCACTCTCAGAATG3151          
AAATTCTACGTGCTGTGTGACTATGACTCCTAAGACTTCCAGGGCTTAAGGGCTAACTCC3211          
TATTAGCACCTTACTATGTAAGCAAATGCTACAAAAAAAAAAAAAAAAA3260                     
(2) INFORMATION FOR SEQ ID NO:2:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 672 amino acids                                               
(B) TYPE: amino acid                                                      
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: protein                                               
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:2:                                   
MetValThrAlaValProAlaValPheSerLysLeuValThrMetLeu                          
151015                                                                    
AsnAlaSerGlySerThrHisPheThrArgMetArgArgArgLeuMet                          
202530                                                                    
AlaIleAlaAspGluValGluIleAlaGluValIleGlnLeuGlyVal                          
354045                                                                    
GluAspThrValAspGlyHisGlnAspSerLeuGlnAlaValAlaPro                          
505560                                                                    
ThrSerCysLeuGluAsnSerSerLeuGluHisThrValHisArgGlu                          
65707580                                                                  
LysThrGlyLysGlyLeuSerAlaThrArgLeuSerAlaSerSerGlu                          
859095                                                                    
AspIleSerAspArgLeuAlaGlyValSerValGlyLeuProSerSer                          
100105110                                                                 
ThrThrThrGluGlnProLysProAlaValGlnThrLysGlyArgPro                          
115120125                                                                 
HisSerGlnCysLeuAsnSerSerProLeuSerHisAlaGlnLeuMet                          
130135140                                                                 
PheProAlaProSerAlaProCysSerSerAlaProSerValProAsp                          
145150155160                                                              
IleSerLysHisArgProGlnAlaPheValProCysLysIleProSer                          
165170175                                                                 
AlaSerProGlnThrGlnArgLysPheSerLeuGlnPheGlnArgAsn                          
180185190                                                                 
CysSerGluHisArgAspSerAspGlnLeuSerProValPheThrGln                          
195200205                                                                 
SerArgProProProSerSerAsnIleHisArgProLysProSerArg                          
210215220                                                                 
ProValProGlySerThrSerLysLeuGlyAspAlaThrLysSerSer                          
225230235240                                                              
MetThrLeuAspLeuGlySerAlaSerArgCysAspAspSerPheGly                          
245250255                                                                 
GlyGlyGlyAsnSerGlyAsnAlaValIleProSerAspGluThrVal                          
260265270                                                                 
PheThrProValGluAspLysCysArgLeuAspValAsnThrGluLeu                          
275280285                                                                 
AsnSerSerIleGluAspLeuLeuGluAlaSerMetProSerSerAsp                          
290295300                                                                 
ThrThrValThrPheLysSerGluValAlaValLeuSerProGluLys                          
305310315320                                                              
AlaGluAsnAspAspThrTyrLysAspAspValAsnHisAsnGlnLys                          
325330335                                                                 
CysLysGluLysMetGluAlaGluGluGluGluAlaLeuAlaIleAla                          
340345350                                                                 
MetAlaMetSerAlaSerGlnAspAlaLeuProIleValProGlnLeu                          
355360365                                                                 
GlnValGluAsnGlyGluAspIleIleIleIleGlnGlnAspThrPro                          
370375380                                                                 
GluThrLeuProGlyHisThrLysAlaLysGlnProTyrArgGluAsp                          
385390395400                                                              
AlaGluTrpLeuLysGlyGlnGlnIleGlyLeuGlyAlaPheSerSer                          
405410415                                                                 
CysTyrGlnAlaGlnAspValGlyThrGlyThrLeuMetAlaValLys                          
420425430                                                                 
GlnValThrTyrValArgAsnThrSerSerGluGlnGluGluValVal                          
435440445                                                                 
GluAlaLeuArgGluGluIleArgMetMetGlyHisLeuAsnHisPro                          
450455460                                                                 
AsnIleIleArgMetLeuGlyAlaThrCysGluLysSerAsnTyrAsn                          
465470475480                                                              
LeuPheIleGluTrpMetAlaGlyGlySerValAlaHisLeuLeuSer                          
485490495                                                                 
LysTyrGlyAlaPheLysGluSerValValIleAsnTyrThrGluGln                          
500505510                                                                 
LeuLeuArgGlyLeuSerTyrLeuHisGluAsnGlnIleIleHisArg                          
515520525                                                                 
AspValLysGlyAlaAsnLeuLeuIleAspSerThrGlyGlnArgLeu                          
530535540                                                                 
ArgIleAlaAspPheGlyAlaAlaAlaArgLeuAlaSerLysGlyThr                          
545550555560                                                              
GlyAlaGlyGluPheGlnGlyGlnLeuLeuGlyThrIleAlaPheMet                          
565570575                                                                 
AlaProGluValLeuArgGlyGlnGlnTyrGlyArgSerCysAspVal                          
580585590                                                                 
TrpSerValGlyCysAlaIleIleGluMetAlaCysAlaLysProPro                          
595600605                                                                 
TrpAsnAlaGluLysHisSerAsnHisLeuAlaLeuIlePheLysIle                          
610615620                                                                 
AlaSerAlaThrThrAlaProSerIleProSerHisLeuSerProGly                          
625630635640                                                              
LeuArgAspValAlaValArgCysLeuGluLeuGlnProGlnAspArg                          
645650655                                                                 
ProProSerArgGluLeuLeuLysHisProValPheArgThrThrTrp                          
660665670                                                                 
(2) INFORMATION FOR SEQ ID NO:3:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 2503 base pairs                                               
(B) TYPE: nucleic acid                                                    
(C) STRANDEDNESS: double                                                  
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: cDNA                                                  
(ix) FEATURE:                                                             
(A) NAME/KEY: CDS                                                         
(B) LOCATION: 466..2325                                                   
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:3:                                   
GGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGAC60            
GATCCAGCGGCAGAGTCGCCGCTTCCGCTTCGCTGCTTCTCCGGTCGGCGACGCGGGCCC120           
GGGGCTTCCTTTTCATCGGCCCAGCTTATTCCGCGGGCCCCGGGGCTGCAGCTACCCAGA180           
AGCGGCGAAGAGGCCCTGGGCTGCGCGCCCGCTGTCCCATGTGAAGCAGGTTGGGCCTGG240           
TCCCCGGCCCGTGCCCGGTTGTCTGCGGCCCTTCAGGCCTCAGGGACCCCCGCGAGGCGC300           
TGCTCCTGGGGGGCGCGGTGACAGGCCGTGCGGGGGCGGAGGGGCCAGCTCGGTGGCCTC360           
CTCTCGGCCCTCGCGTCCGCGATCCCGCCCAGCGGCCGGGCAATAAAGAATGTTGATGGG420           
AGAACCATTTTCCTAATTTTCAAATTATTGAGCTGGTCGCGCATAATGGATGAT474                 
MetAspAsp                                                                 
CAGCAAGCTTTGAATTCAATCATGCAAGATTTGGCTGTCCTTCATAAG522                       
GlnGlnAlaLeuAsnSerIleMetGlnAspLeuAlaValLeuHisLys                          
51015                                                                     
CCAGTCGGCCAGCATTATCTTTACAAGAAACCAGGAAAGCAAAACCTT570                       
ProValGlyGlnHisTyrLeuTyrLysLysProGlyLysGlnAsnLeu                          
20253035                                                                  
CATCACCAAAAAAACAGAATGATGTTCGAGTCAAATTTGAACATAGAG618                       
HisHisGlnLysAsnArgMetMetPheGluSerAsnLeuAsnIleGlu                          
404550                                                                    
GAGGAAAAAAGGATCCTGCAGGTTACTAGACCAGTTAAACTAGAAGAC666                       
GluGluLysArgIleLeuGlnValThrArgProValLysLeuGluAsp                          
556065                                                                    
CTGAGATCTAAGTCTAAGATCGCCTTTGGGCAGTCTATGGATCTACAC714                       
LeuArgSerLysSerLysIleAlaPheGlyGlnSerMetAspLeuHis                          
707580                                                                    
TATACCAACAATGAGTTGGTAATTCCGTTAACTACCCAAGATGACTTG762                       
TyrThrAsnAsnGluLeuValIleProLeuThrThrGlnAspAspLeu                          
859095                                                                    
GACAAAGCTGTGGAACTGCTGGATCGCAGTATTCACATGAAGAGTCTC810                       
AspLysAlaValGluLeuLeuAspArgSerIleHisMetLysSerLeu                          
100105110115                                                              
AAGATATTACTTGTAGTAAATGGGAGTACACAGGCTACTAATTTAGAA858                       
LysIleLeuLeuValValAsnGlySerThrGlnAlaThrAsnLeuGlu                          
120125130                                                                 
CCATCACCGTCACCAGAAGATTTGAATAATACACCACTTGGTGCAGAG906                       
ProSerProSerProGluAspLeuAsnAsnThrProLeuGlyAlaGlu                          
135140145                                                                 
AGGAAAAAGCGGCTATCTGTAGTAGGTCCCCCTAATAGGGATAGAAGT954                       
ArgLysLysArgLeuSerValValGlyProProAsnArgAspArgSer                          
150155160                                                                 
TCCCCTCCTCCAGGATACATTCCAGACATACTACACCAGATTGCCCGG1002                      
SerProProProGlyTyrIleProAspIleLeuHisGlnIleAlaArg                          
165170175                                                                 
AATGGGTCATTCACTAGCATCAACAGTGAAGGAGAGTTCATTCCAGAG1050                      
AsnGlySerPheThrSerIleAsnSerGluGlyGluPheIleProGlu                          
180185190195                                                              
AGCATGGACCAAATGCTGGATCCATTGTCTTTAAGCAGCCCTGAAAAT1098                      
SerMetAspGlnMetLeuAspProLeuSerLeuSerSerProGluAsn                          
200205210                                                                 
TCTGGCTCAGGAAGCTGTCCGTCACTTGATAGTCCTTTGGATGGAGAA1146                      
SerGlySerGlySerCysProSerLeuAspSerProLeuAspGlyGlu                          
215220225                                                                 
AGCTACCCAAAATCACGGATGCCTAGGGCACAGAGCTACCCAGATAAT1194                      
SerTyrProLysSerArgMetProArgAlaGlnSerTyrProAspAsn                          
230235240                                                                 
CATCAGGAGTTTACAGACTATGATAACCCCATTTTTGAGAAATTTGGA1242                      
HisGlnGluPheThrAspTyrAspAsnProIlePheGluLysPheGly                          
245250255                                                                 
AAAGGAGGAACATATCCAAGAAGGTACCACGTTTCCTATCATCACCAG1290                      
LysGlyGlyThrTyrProArgArgTyrHisValSerTyrHisHisGln                          
260265270275                                                              
GAGTATAATGACGGTCGGAAGACTTTTCCAAGAGCTAGAAGGACCCAG1338                      
GluTyrAsnAspGlyArgLysThrPheProArgAlaArgArgThrGln                          
280285290                                                                 
GGCACCAGTTTCCGGTCTCCTGTGAGCTTCAGTCCTACTGATCACTCC1386                      
GlyThrSerPheArgSerProValSerPheSerProThrAspHisSer                          
295300305                                                                 
TTAAGCACTAGTAGTGGAAGCAGTGTCTTTACCCCAGAGTATGACGAC1434                      
LeuSerThrSerSerGlySerSerValPheThrProGluTyrAspAsp                          
310315320                                                                 
AGTCGAATAAGAAGACGGGGGAGTGACATAGACAATCCTACTTTGACT1482                      
SerArgIleArgArgArgGlySerAspIleAspAsnProThrLeuThr                          
325330335                                                                 
GTCACAGACATCAGCCCACCCAGCCGTTCACCTCGAGCTCCGACCAAC1530                      
ValThrAspIleSerProProSerArgSerProArgAlaProThrAsn                          
340345350355                                                              
TGGAGACTGGGCAAGCTGCTTGGCCAAGGAGCTTTTGGTAGGGTCTAC1578                      
TrpArgLeuGlyLysLeuLeuGlyGlnGlyAlaPheGlyArgValTyr                          
360365370                                                                 
CTCTGCTATGATGTTGATACCGGAAGAGAGCTGGCTGTTAAGCAAGTT1626                      
LeuCysTyrAspValAspThrGlyArgGluLeuAlaValLysGlnVal                          
375380385                                                                 
CAGTTTAACCCTGAGAGCCCAGAGACCAGCAAGGAAGTAAATGCACTT1674                      
GlnPheAsnProGluSerProGluThrSerLysGluValAsnAlaLeu                          
390395400                                                                 
GAGTGTGAAATTCAGTTGTTGAAAAACTTGTTGCATGAGCGAATTGTT1722                      
GluCysGluIleGlnLeuLeuLysAsnLeuLeuHisGluArgIleVal                          
405410415                                                                 
CAGTATTATGGCTGTTTGAGGGATCCTCAGGAGAAAACACTTTCCATC1770                      
GlnTyrTyrGlyCysLeuArgAspProGlnGluLysThrLeuSerIle                          
420425430435                                                              
TTTATGGAGCTCTCGCCAGGGGGTTCAATTAAGGACCAACTAAAAGCC1818                      
PheMetGluLeuSerProGlyGlySerIleLysAspGlnLeuLysAla                          
440445450                                                                 
TACGGAGCTCTTACTGAGAACGTGACGAGGAAGTACACCCGTCAGATT1866                      
TyrGlyAlaLeuThrGluAsnValThrArgLysTyrThrArgGlnIle                          
455460465                                                                 
CTGGAGGGGGTCCATTATTTGCATAGTAATATGATTGTCCATAGAGAT1914                      
LeuGluGlyValHisTyrLeuHisSerAsnMetIleValHisArgAsp                          
470475480                                                                 
ATCAAAGGAGCAAATATCTTAAGGGATTCCACAGGCAATATCAAGTTA1962                      
IleLysGlyAlaAsnIleLeuArgAspSerThrGlyAsnIleLysLeu                          
485490495                                                                 
GGAGACTTTGGGGCTAGTAAACGGCTTCAGACCATCTGTCTCTCAGGC2010                      
GlyAspPheGlyAlaSerLysArgLeuGlnThrIleCysLeuSerGly                          
500505510515                                                              
ACAGGAATGAAGTCTGTCACAGGCACGCCATACTGGATGAGTCCTGAG2058                      
ThrGlyMetLysSerValThrGlyThrProTyrTrpMetSerProGlu                          
520525530                                                                 
GTCATCAGTGGAGAAGGCTATGGAAGAAAAGCAGACATCTGGAGTGTA2106                      
ValIleSerGlyGluGlyTyrGlyArgLysAlaAspIleTrpSerVal                          
535540545                                                                 
GCATGTACTGTGGTAGAAATGCTAACTGAAAAGCCACCTTGGGCTGAA2154                      
AlaCysThrValValGluMetLeuThrGluLysProProTrpAlaGlu                          
550555560                                                                 
TTTGAAGCAATGGCTGCCATCTTTAAGATCGCCACTCAGCCAACGAAC2202                      
PheGluAlaMetAlaAlaIlePheLysIleAlaThrGlnProThrAsn                          
565570575                                                                 
CCAAAGCTGCCACCTCATGTCTCAGACTATACTCGGGACTTCCTCAAA2250                      
ProLysLeuProProHisValSerAspTyrThrArgAspPheLeuLys                          
580585590595                                                              
CGGATTTTTGTAGAGGCCAAACTTCGACCTTCAGCGGAGGAGCTCTTG2298                      
ArgIlePheValGluAlaLysLeuArgProSerAlaGluGluLeuLeu                          
600605610                                                                 
CGGCACATGTTTGTGCATTATCACTAGCAGCGGCGGCTTCGGTCCTCCACCAGC2352                
ArgHisMetPheValHisTyrHis                                                  
615620                                                                    
TCCATCCTCGCGGCCACCTTCTCTCTTACTGCACTTTCCTTTTTTATAAAAAAGAGAGAT2412          
GGGGAGAAAAAGACAAGAGGGAAAATATTTCTCTTGATTCTTGGTTAAATTTGTTTAATA2472          
ATAATAGTAAACTAAAAAAAAAAAAAAAAAA2503                                       
(2) INFORMATION FOR SEQ ID NO:4:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 619 amino acids                                               
(B) TYPE: amino acid                                                      
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: protein                                               
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:4:                                   
MetAspAspGlnGlnAlaLeuAsnSerIleMetGlnAspLeuAlaVal                          
151015                                                                    
LeuHisLysProValGlyGlnHisTyrLeuTyrLysLysProGlyLys                          
202530                                                                    
GlnAsnLeuHisHisGlnLysAsnArgMetMetPheGluSerAsnLeu                          
354045                                                                    
AsnIleGluGluGluLysArgIleLeuGlnValThrArgProValLys                          
505560                                                                    
LeuGluAspLeuArgSerLysSerLysIleAlaPheGlyGlnSerMet                          
65707580                                                                  
AspLeuHisTyrThrAsnAsnGluLeuValIleProLeuThrThrGln                          
859095                                                                    
AspAspLeuAspLysAlaValGluLeuLeuAspArgSerIleHisMet                          
100105110                                                                 
LysSerLeuLysIleLeuLeuValValAsnGlySerThrGlnAlaThr                          
115120125                                                                 
AsnLeuGluProSerProSerProGluAspLeuAsnAsnThrProLeu                          
130135140                                                                 
GlyAlaGluArgLysLysArgLeuSerValValGlyProProAsnArg                          
145150155160                                                              
AspArgSerSerProProProGlyTyrIleProAspIleLeuHisGln                          
165170175                                                                 
IleAlaArgAsnGlySerPheThrSerIleAsnSerGluGlyGluPhe                          
180185190                                                                 
IleProGluSerMetAspGlnMetLeuAspProLeuSerLeuSerSer                          
195200205                                                                 
ProGluAsnSerGlySerGlySerCysProSerLeuAspSerProLeu                          
210215220                                                                 
AspGlyGluSerTyrProLysSerArgMetProArgAlaGlnSerTyr                          
225230235240                                                              
ProAspAsnHisGlnGluPheThrAspTyrAspAsnProIlePheGlu                          
245250255                                                                 
LysPheGlyLysGlyGlyThrTyrProArgArgTyrHisValSerTyr                          
260265270                                                                 
HisHisGlnGluTyrAsnAspGlyArgLysThrPheProArgAlaArg                          
275280285                                                                 
ArgThrGlnGlyThrSerPheArgSerProValSerPheSerProThr                          
290295300                                                                 
AspHisSerLeuSerThrSerSerGlySerSerValPheThrProGlu                          
305310315320                                                              
TyrAspAspSerArgIleArgArgArgGlySerAspIleAspAsnPro                          
325330335                                                                 
ThrLeuThrValThrAspIleSerProProSerArgSerProArgAla                          
340345350                                                                 
ProThrAsnTrpArgLeuGlyLysLeuLeuGlyGlnGlyAlaPheGly                          
355360365                                                                 
ArgValTyrLeuCysTyrAspValAspThrGlyArgGluLeuAlaVal                          
370375380                                                                 
LysGlnValGlnPheAsnProGluSerProGluThrSerLysGluVal                          
385390395400                                                              
AsnAlaLeuGluCysGluIleGlnLeuLeuLysAsnLeuLeuHisGlu                          
405410415                                                                 
ArgIleValGlnTyrTyrGlyCysLeuArgAspProGlnGluLysThr                          
420425430                                                                 
LeuSerIlePheMetGluLeuSerProGlyGlySerIleLysAspGln                          
435440445                                                                 
LeuLysAlaTyrGlyAlaLeuThrGluAsnValThrArgLysTyrThr                          
450455460                                                                 
ArgGlnIleLeuGluGlyValHisTyrLeuHisSerAsnMetIleVal                          
465470475480                                                              
HisArgAspIleLysGlyAlaAsnIleLeuArgAspSerThrGlyAsn                          
485490495                                                                 
IleLysLeuGlyAspPheGlyAlaSerLysArgLeuGlnThrIleCys                          
500505510                                                                 
LeuSerGlyThrGlyMetLysSerValThrGlyThrProTyrTrpMet                          
515520525                                                                 
SerProGluValIleSerGlyGluGlyTyrGlyArgLysAlaAspIle                          
530535540                                                                 
TrpSerValAlaCysThrValValGluMetLeuThrGluLysProPro                          
545550555560                                                              
TrpAlaGluPheGluAlaMetAlaAlaIlePheLysIleAlaThrGln                          
565570575                                                                 
ProThrAsnProLysLeuProProHisValSerAspTyrThrArgAsp                          
580585590                                                                 
PheLeuLysArgIlePheValGluAlaLysLeuArgProSerAlaGlu                          
595600605                                                                 
GluLeuLeuArgHisMetPheValHisTyrHis                                         
610615                                                                    
(2) INFORMATION FOR SEQ ID NO:5:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 3089 base pairs                                               
(B) TYPE: nucleic acid                                                    
(C) STRANDEDNESS: double                                                  
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: cDNA                                                  
(ix) FEATURE:                                                             
(A) NAME/KEY: CDS                                                         
(B) LOCATION: 400..2280                                                   
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:5:                                   
AGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCC60            
GGGCTGCAGGAATTCGGCACGAGGAACAGTGGCCGGTCGGAGCGTCTTCTGGACTTCAGG120           
ACTCGCAGGCGGCCCGGTCGAGTGGCGCCGCCGAGGCCGGGTTGGGCCGAGCCTGGGAGC180           
GCCGGGGATGTAGCGGGCCAACCTGCTCATGCCACAGCGCCCGGCCGCGGCCGAGCCGGA240           
GCCTGGGGAGGCGGCGGGGGCCCCGAGCGCAGCCCACGGCCCCCGCGCGGAGCCAGGCCC300           
GCTGCCGTCCCCGCCGCCCGCTCCCCCGGCATGCAGCCCCGGCTGCGGAGGTGACACTTC360           
TGGGCTGTAGTCGCCACCGCCGCCTCCGCCATCGCCACCATGGATGAACAAGAG414                 
MetAspGluGlnGlu                                                           
15                                                                        
GCATTAGACTCGATCATGAAGGACCTGGTGGCCCTCCAGATGAGCCGA462                       
AlaLeuAspSerIleMetLysAspLeuValAlaLeuGlnMetSerArg                          
101520                                                                    
CGAACCCGGTTGTCTGGATATGAGACCATGAAGAATAAGGACACAGGT510                       
ArgThrArgLeuSerGlyTyrGluThrMetLysAsnLysAspThrGly                          
253035                                                                    
CACCCAAACAGGCAGAGTGACGTCAGAATCAAGTTTGAACACAATGGG558                       
HisProAsnArgGlnSerAspValArgIleLysPheGluHisAsnGly                          
404550                                                                    
GAGAGACGAATTATAGCATTCAGCCGGCCTGTGAGATACGAAGATGTG606                       
GluArgArgIleIleAlaPheSerArgProValArgTyrGluAspVal                          
556065                                                                    
GAGCACAAGGTGACAACAGTCTTTGGGCAGCCTCTTGATTTGCATTAT654                       
GluHisLysValThrThrValPheGlyGlnProLeuAspLeuHisTyr                          
70758085                                                                  
ATGAATAATGAGCTCTCCATCCTGTTGAAAAACCAAGATGATCTCGAT702                       
MetAsnAsnGluLeuSerIleLeuLeuLysAsnGlnAspAspLeuAsp                          
9095100                                                                   
AAAGCCATTGACATTTTGGATAGAAGCTCAAGTATGAAAAGCCTTAGG750                       
LysAlaIleAspIleLeuAspArgSerSerSerMetLysSerLeuArg                          
105110115                                                                 
ATACTACTGTTATCCCAAGACAGAAACCATACTAGTTCCTCTCCCCAC798                       
IleLeuLeuLeuSerGlnAspArgAsnHisThrSerSerSerProHis                          
120125130                                                                 
TCTGGAGTGTCCAGGCAGGTTCGGATCAAGCCTTCCCAGTCTGCAGGG846                       
SerGlyValSerArgGlnValArgIleLysProSerGlnSerAlaGly                          
135140145                                                                 
GATATAAATACCATCTACCAAGCTCCTGAGCCCAGAAGCAGGCACCTG894                       
AspIleAsnThrIleTyrGlnAlaProGluProArgSerArgHisLeu                          
150155160165                                                              
TCTGTCAGCTCCCAGAACCCTGGCCGAAGCTCTCCTCCCCCGGGATAT942                       
SerValSerSerGlnAsnProGlyArgSerSerProProProGlyTyr                          
170175180                                                                 
GTACCTGAGCGACAACAGCACATTGCCCGGCAAGGATCCTATACGAGC990                       
ValProGluArgGlnGlnHisIleAlaArgGlnGlySerTyrThrSer                          
185190195                                                                 
ATCAACAGCGAAGGTGAATTCATCCCAGAGACCAGCGAACAGTGTATG1038                      
IleAsnSerGluGlyGluPheIleProGluThrSerGluGlnCysMet                          
200205210                                                                 
CTAGATCCCCTCAGCAGTGCCGAAAATTCCTTGTCAGGAAGCTGCCAA1086                      
LeuAspProLeuSerSerAlaGluAsnSerLeuSerGlySerCysGln                          
215220225                                                                 
TCCTTGGACAGGTCAGCAGACAGCCCATCCTTCAGGAAATCACAAATG1134                      
SerLeuAspArgSerAlaAspSerProSerPheArgLysSerGlnMet                          
230235240245                                                              
TCCCGAGCCCGGAGCTTCCCAGACAACAGAAAGGAATGCTCAGATCGG1182                      
SerArgAlaArgSerPheProAspAsnArgLysGluCysSerAspArg                          
250255260                                                                 
GAGACCCAGCTCTATGATAAAGGTGTCAAAGGTGGAACCTATCCCAGG1230                      
GluThrGlnLeuTyrAspLysGlyValLysGlyGlyThrTyrProArg                          
265270275                                                                 
CGCTACCATGTGTCTGTGCATCACAAAGACTACAATGATGGCAGAAGA1278                      
ArgTyrHisValSerValHisHisLysAspTyrAsnAspGlyArgArg                          
280285290                                                                 
ACATTTCCCCGAATACGACGGCATCAAGGCAACCTATTCACTCTGGTG1326                      
ThrPheProArgIleArgArgHisGlnGlyAsnLeuPheThrLeuVal                          
295300305                                                                 
CCCTCAAGTCGCTCCTTGAGCACAAATGGCGAGAACATGGGTGTAGCT1374                      
ProSerSerArgSerLeuSerThrAsnGlyGluAsnMetGlyValAla                          
310315320325                                                              
GTGCAATACCTGGACCCCCGTGGGCGCCTACGGAGTGCAGACAGTGAG1422                      
ValGlnTyrLeuAspProArgGlyArgLeuArgSerAlaAspSerGlu                          
330335340                                                                 
AATGCCCTCACTGTGCAGGAAAGGAATGTGCCAACCAAATCTCCTAGT1470                      
AsnAlaLeuThrValGlnGluArgAsnValProThrLysSerProSer                          
345350355                                                                 
GCTCCCATCAATTGGCGTCGGGGGAAGCTCCTGGGTCAAGGTGCCTTC1518                      
AlaProIleAsnTrpArgArgGlyLysLeuLeuGlyGlnGlyAlaPhe                          
360365370                                                                 
GGCAGGGTCTACTTGTGCTATGATGTGGACACAGGACGTGAACTTGCT1566                      
GlyArgValTyrLeuCysTyrAspValAspThrGlyArgGluLeuAla                          
375380385                                                                 
TCTAAGCAGGTCCAGTTTGACCCAGATAGTCCTGAGACAAGCAAGGAG1614                      
SerLysGlnValGlnPheAspProAspSerProGluThrSerLysGlu                          
390395400405                                                              
GTGAGTGCTCTGGAGTGTGAGATCCAGTTGCTGAAGAACCTGCAGCAT1662                      
ValSerAlaLeuGluCysGluIleGlnLeuLeuLysAsnLeuGlnHis                          
410415420                                                                 
GAGCGCATTGTGCAGTACTACGGCTGCCTGCGGGACCGTGCTGAGAAG1710                      
GluArgIleValGlnTyrTyrGlyCysLeuArgAspArgAlaGluLys                          
425430435                                                                 
ATCCTCACCATCTTTATGGAGTATATGCCAGGGGGCTCTGTAAAAGAC1758                      
IleLeuThrIlePheMetGluTyrMetProGlyGlySerValLysAsp                          
440445450                                                                 
CAGTTGAAGGCCTACGGAGCTCTGACAGAGAGTGTGACCCGCAAGTAC1806                      
GlnLeuLysAlaTyrGlyAlaLeuThrGluSerValThrArgLysTyr                          
455460465                                                                 
ACCCGGCAGATTCTGGAGGGCATGTCATACCTGCACAGCAACATGATT1854                      
ThrArgGlnIleLeuGluGlyMetSerTyrLeuHisSerAsnMetIle                          
470475480485                                                              
GTGCATCGGGACATCAAGGGAGCCAATATCCTCCGAGACTCAGCTGGG1902                      
ValHisArgAspIleLysGlyAlaAsnIleLeuArgAspSerAlaGly                          
490495500                                                                 
AATGTGAAGCTTGGGGATTTTGGGGCCAGCAAACGCCTACAGACCATC1950                      
AsnValLysLeuGlyAspPheGlyAlaSerLysArgLeuGlnThrIle                          
505510515                                                                 
TGCATGTCAGGGACAGGCATTCGCTCTGTCACTGGCACACCCTACTGG1998                      
CysMetSerGlyThrGlyIleArgSerValThrGlyThrProTyrTrp                          
520525530                                                                 
ATGAGTCCTGAAGTCATCAGTGGCGAGGGCTATGGAAGAAAGGCAGAC2046                      
MetSerProGluValIleSerGlyGluGlyTyrGlyArgLysAlaAsp                          
535540545                                                                 
GTGTGGAGCCTGGGCTGTACTGTGGTGGAAATGCTGACAGAGAAACCA2094                      
ValTrpSerLeuGlyCysThrValValGluMetLeuThrGluLysPro                          
550555560565                                                              
CCTTGGGCAGAGTATGAAGCTATGGCTGCCATTTTCAAGATTGCCACC2142                      
ProTrpAlaGluTyrGluAlaMetAlaAlaIlePheLysIleAlaThr                          
570575580                                                                 
CAGCCTACCAATCCTCAGCTGCCCTCTCACATCTCAGAACACGGCAGG2190                      
GlnProThrAsnProGlnLeuProSerHisIleSerGluHisGlyArg                          
585590595                                                                 
GACTTCCTGAGGCGCATATTTGTGGAAGCTCGTCAGAGACCCTCAGCT2238                      
AspPheLeuArgArgIlePheValGluAlaArgGlnArgProSerAla                          
600605610                                                                 
GAGGAGCTGCTCACACACCACTTTGCACAGCTAGTGTACTGAGCTCTCA2287                     
GluGluLeuLeuThrHisHisPheAlaGlnLeuValTyr                                   
615620625                                                                 
AGGCTATCAGGCTGCCAGCTGCCACCTGCTGAGCAGGCAAGGGGCTGCTGTCAGGCTCAG2347          
TGAAGTTGCTGCTTCTTCCAGGCAAGGCTATGACCAGTGGAGCATCGGTCCAGCCATTGT2407          
TTGTCTGTGCCCCATCTGCCACTGGGACTCAAAGCCAGGATGGGATAGCTCTGGCATCAA2467          
GACTGGGAGCTCCAGCCTGTAAGACCCAAGAGCTTTAGCACCTTAAGCTCAGTATGGCGG2527          
GAAGGGCTGGAAACAGTATGCAAGACTGCCATGGGTCCTGCCTACCCTCAGATGTGTCCT2587          
AACACTGCAGACAGCACTGAAGTCAAGAGGGACTGGGGCACAGGAGGTCCTCAAGGGTAT2647          
GAATAGTGTTACTTCATTCAGAGTGTTACTTTGTTTCTCTCCCAATGTTTGGAGACCACC2707          
AGCCTGTCTCTGGGCTGCAAGCCTGAGGTAAAGCCCAGCATCCCCCAGCCAACAGAAGGT2767          
AGAGGTTTGGGCTACCCCACTATAGCTTCCAGGTATTCGGTGTCAGTCCTGTCTTACCAA2827          
AGATGAATGAAGCAAATGTTACACTGCCTTATTCTGGGAAGGAGGAGCTACTCGGATAAG2887          
CAGGGCCTGAGAGATGGAGCTGCCTCCAGAAACTGGGGAGACCCAGTCTTGTCAATGCAA2947          
TTGTCTCTGTTTTACAAGTTGGAGTCACTCTTATGCTGTTCCCAGTTTTAAAACTGGAGA3007          
CTTTGCCCTCTGAGCTCTGGAGACCCATGTGGGCTTAGGCTTGGACTGGATGGAAGAGCT3067          
GATGGCCTCTGCCCCTGGCCTG3089                                                
(2) INFORMATION FOR SEQ ID NO:6:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 626 amino acids                                               
(B) TYPE: amino acid                                                      
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: protein                                               
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:6:                                   
MetAspGluGlnGluAlaLeuAspSerIleMetLysAspLeuValAla                          
151015                                                                    
LeuGlnMetSerArgArgThrArgLeuSerGlyTyrGluThrMetLys                          
202530                                                                    
AsnLysAspThrGlyHisProAsnArgGlnSerAspValArgIleLys                          
354045                                                                    
PheGluHisAsnGlyGluArgArgIleIleAlaPheSerArgProVal                          
505560                                                                    
ArgTyrGluAspValGluHisLysValThrThrValPheGlyGlnPro                          
65707580                                                                  
LeuAspLeuHisTyrMetAsnAsnGluLeuSerIleLeuLeuLysAsn                          
859095                                                                    
GlnAspAspLeuAspLysAlaIleAspIleLeuAspArgSerSerSer                          
100105110                                                                 
MetLysSerLeuArgIleLeuLeuLeuSerGlnAspArgAsnHisThr                          
115120125                                                                 
SerSerSerProHisSerGlyValSerArgGlnValArgIleLysPro                          
130135140                                                                 
SerGlnSerAlaGlyAspIleAsnThrIleTyrGlnAlaProGluPro                          
145150155160                                                              
ArgSerArgHisLeuSerValSerSerGlnAsnProGlyArgSerSer                          
165170175                                                                 
ProProProGlyTyrValProGluArgGlnGlnHisIleAlaArgGln                          
180185190                                                                 
GlySerTyrThrSerIleAsnSerGluGlyGluPheIleProGluThr                          
195200205                                                                 
SerGluGlnCysMetLeuAspProLeuSerSerAlaGluAsnSerLeu                          
210215220                                                                 
SerGlySerCysGlnSerLeuAspArgSerAlaAspSerProSerPhe                          
225230235240                                                              
ArgLysSerGlnMetSerArgAlaArgSerPheProAspAsnArgLys                          
245250255                                                                 
GluCysSerAspArgGluThrGlnLeuTyrAspLysGlyValLysGly                          
260265270                                                                 
GlyThrTyrProArgArgTyrHisValSerValHisHisLysAspTyr                          
275280285                                                                 
AsnAspGlyArgArgThrPheProArgIleArgArgHisGlnGlyAsn                          
290295300                                                                 
LeuPheThrLeuValProSerSerArgSerLeuSerThrAsnGlyGlu                          
305310315320                                                              
AsnMetGlyValAlaValGlnTyrLeuAspProArgGlyArgLeuArg                          
325330335                                                                 
SerAlaAspSerGluAsnAlaLeuThrValGlnGluArgAsnValPro                          
340345350                                                                 
ThrLysSerProSerAlaProIleAsnTrpArgArgGlyLysLeuLeu                          
355360365                                                                 
GlyGlnGlyAlaPheGlyArgValTyrLeuCysTyrAspValAspThr                          
370375380                                                                 
GlyArgGluLeuAlaSerLysGlnValGlnPheAspProAspSerPro                          
385390395400                                                              
GluThrSerLysGluValSerAlaLeuGluCysGluIleGlnLeuLeu                          
405410415                                                                 
LysAsnLeuGlnHisGluArgIleValGlnTyrTyrGlyCysLeuArg                          
420425430                                                                 
AspArgAlaGluLysIleLeuThrIlePheMetGluTyrMetProGly                          
435440445                                                                 
GlySerValLysAspGlnLeuLysAlaTyrGlyAlaLeuThrGluSer                          
450455460                                                                 
ValThrArgLysTyrThrArgGlnIleLeuGluGlyMetSerTyrLeu                          
465470475480                                                              
HisSerAsnMetIleValHisArgAspIleLysGlyAlaAsnIleLeu                          
485490495                                                                 
ArgAspSerAlaGlyAsnValLysLeuGlyAspPheGlyAlaSerLys                          
500505510                                                                 
ArgLeuGlnThrIleCysMetSerGlyThrGlyIleArgSerValThr                          
515520525                                                                 
GlyThrProTyrTrpMetSerProGluValIleSerGlyGluGlyTyr                          
530535540                                                                 
GlyArgLysAlaAspValTrpSerLeuGlyCysThrValValGluMet                          
545550555560                                                              
LeuThrGluLysProProTrpAlaGluTyrGluAlaMetAlaAlaIle                          
565570575                                                                 
PheLysIleAlaThrGlnProThrAsnProGlnLeuProSerHisIle                          
580585590                                                                 
SerGluHisGlyArgAspPheLeuArgArgIlePheValGluAlaArg                          
595600605                                                                 
GlnArgProSerAlaGluGluLeuLeuThrHisHisPheAlaGlnLeu                          
610615620                                                                 
ValTyr                                                                    
625                                                                       
(2) INFORMATION FOR SEQ ID NO:7:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 3913 base pairs                                               
(B) TYPE: nucleic acid                                                    
(C) STRANDEDNESS: double                                                  
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: cDNA                                                  
(ix) FEATURE:                                                             
(A) NAME/KEY: CDS                                                         
(B) LOCATION: 747..3417                                                   
(A) NAME/KEY: N = G,A,C or T                                              
(B) LOCATION: 1094                                                        
(A) NAME/KEY: Xaa = Any amino acid                                        
(B) LOCATION: 116                                                         
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:7:                                   
AATTCGGCACGAGAACCTATCAGACATTGGCTGGCCAGTGTTTGAAATCCCCTCCCCTCG60            
GCCGTCCAAGGGCTACGAGCCAGAGGACGAGGTCGAGGACACGGAGGTTGAGCTGAGGGA120           
GCTGGAGAGCGGGACGGAGGAGAGTGACGAGGAGCCAACCCCCAGTCCGAGGGTGCCAGA180           
GCTCAGGCTGTCCACAGACACCATCTTGGACAGTCGCTCCCAGGGCTGCGTCTCCAGGAA240           
GCTGGAGAGGCTCGAGTCAGAGGAAGATTCCATAGGCTGGGGGACAGCGGACTGTGGCCC300           
TGAAGCCAGCAGGCATTGTTTGACTTCTATCTATAGACCATTCGTGGACAAAGCACTGAA360           
GCAAATGGGGCTAAGAAAGTTAATTTTACGACTTCATAAGCTTATGAATGGGTCCTTGCA420           
AAGAGCTCGTGTAGCTCTGGTGAAGGACGACCGTCAGTGGAGTTCTCTGACTTTCCAGGT480           
CCCATGTGGGGCTCGGATTATGTGCAGTTGTCGGGAACACCTCCTTCCTCAGAGCAGAAG540           
TGTAGCGCTGTGTCCTGGGAAGAACTGAGAGCCATGGACCTGCCTTCCTTTGAGCCCGCC600           
TTCCTGGTGCTCTGTCGGGTCCTGCTGAACGTGATCCACGAGTGCCTGAAGCTGCGGCTG660           
GAACAGAGGCTGCCGGGGAGCCTTCCCTCTTGAGTATCAAACAGCTAGTGCGAGAGTGTA720           
AAGAGGTCCTAAAGGGCGGGCTCCTGATGAAGCAGTATTACCAGTTCATGCTG773                  
MetLysGlnTyrTyrGlnPheMetLeu                                               
15                                                                        
CAGGAGGTCCTGGGCGGACTGGAGAAGACCGACTGCAACATGGATGCC821                       
GlnGluValLeuGlyGlyLeuGluLysThrAspCysAsnMetAspAla                          
10152025                                                                  
TTTGAGGAGGACCTGCAGAAGATGCTGATGGTGTATTTTGATTACATG869                       
PheGluGluAspLeuGlnLysMetLeuMetValTyrPheAspTyrMet                          
303540                                                                    
AGAAGCTGGATCCAAATGCTACAGCAGTTACCTCAGGCTTCCCATAGC917                       
ArgSerTrpIleGlnMetLeuGlnGlnLeuProGlnAlaSerHisSer                          
455055                                                                    
TTAAAAAACCTGCTAGAAGAGGAATGGAATTTCACCAAAGAAATAACC965                       
LeuLysAsnLeuLeuGluGluGluTrpAsnPheThrLysGluIleThr                          
606570                                                                    
CATTATATCCGTGGCGGAGAAGCGCAGGCTGGAAAGCTTTTCTGTGAC1013                      
HisTyrIleArgGlyGlyGluAlaGlnAlaGlyLysLeuPheCysAsp                          
758085                                                                    
ATCGCAGGGATGCTGCTGAAATCCACAGGGAGCTTTCTGGAATCCGGC1061                      
IleAlaGlyMetLeuLeuLysSerThrGlySerPheLeuGluSerGly                          
9095100105                                                                
CTGCAGGAGAGCTGTGCTGAGCTGTGGACCAGNGCCGACGACAACGGT1109                      
LeuGlnGluSerCysAlaGluLeuTrpThrXaaAlaAspAspAsnGly                          
110115120                                                                 
GCTGCCGACGAGCTAAGGAGATCTGTCATCGAGATCAGCCGAGCACTC1157                      
AlaAlaAspGluLeuArgArgSerValIleGluIleSerArgAlaLeu                          
125130135                                                                 
AAGGAGCTCTTCCACGAAGCCAGGGAAAGAGCCTCCAAGGCCCTGGGC1205                      
LysGluLeuPheHisGluAlaArgGluArgAlaSerLysAlaLeuGly                          
140145150                                                                 
TTTGCTAAAATGCTGAGGAAGGACCTAGAAATAGCAGCAGAGTTCGTG1253                      
PheAlaLysMetLeuArgLysAspLeuGluIleAlaAlaGluPheVal                          
155160165                                                                 
CTATCTGCATCAGCCCGAGAGCTCCTGGACGCTCTGAAAGCAAAGCAG1301                      
LeuSerAlaSerAlaArgGluLeuLeuAspAlaLeuLysAlaLysGln                          
170175180185                                                              
TATGTTAAGGTACAGATTCCCGGGTTAGAGAATTTGCACGTGTTTGTC1349                      
TyrValLysValGlnIleProGlyLeuGluAsnLeuHisValPheVal                          
190195200                                                                 
CCCGACAGCCTCGCTGAGGAGAAGAAAATTATTTTGCAGCTACTCAAT1397                      
ProAspSerLeuAlaGluGluLysLysIleIleLeuGlnLeuLeuAsn                          
205210215                                                                 
GCTGCCACAGGAAAGGACTGCTCAAAGGATCCAGACGACGTCTTCATG1445                      
AlaAlaThrGlyLysAspCysSerLysAspProAspAspValPheMet                          
220225230                                                                 
GATGCCTTCCTGCTCCTGACCAAGCATGGGGACCGAGCCCGTGACTCA1493                      
AspAlaPheLeuLeuLeuThrLysHisGlyAspArgAlaArgAspSer                          
235240245                                                                 
GAAGATGGCTGGGGCACATGGGAAGCTCGGGCTGTCAAAATTGTGCCT1541                      
GluAspGlyTrpGlyThrTrpGluAlaArgAlaValLysIleValPro                          
250255260265                                                              
CAGGTGGAGACTGTGGACACCCTGAGAAGCATGCAGGTGGACAACCTT1589                      
GlnValGluThrValAspThrLeuArgSerMetGlnValAspAsnLeu                          
270275280                                                                 
CTGCTGGTTGTCATGGAGTCTGCTCACCTCGTACTTCAGAGAAAAGCC1637                      
LeuLeuValValMetGluSerAlaHisLeuValLeuGlnArgLysAla                          
285290295                                                                 
TTCCAGCAGTCCATTGAGGGGCTGATGACTGTACGCCATGAGCAGACA1685                      
PheGlnGlnSerIleGluGlyLeuMetThrValArgHisGluGlnThr                          
300305310                                                                 
TCTAGCCAGCCCATCATCGCCAAAGGTTTGCAGCAGCTCAAGAACGAT1733                      
SerSerGlnProIleIleAlaLysGlyLeuGlnGlnLeuLysAsnAsp                          
315320325                                                                 
GCACTTGAGCTATGCAACAGAATCAGCGATGCCATCGACCGTGTGGAC1781                      
AlaLeuGluLeuCysAsnArgIleSerAspAlaIleAspArgValAsp                          
330335340345                                                              
CACATGTTCACCCTGGAGTTCGATGCTGAGGTCGAGGAGTCTGAGTCG1829                      
HisMetPheThrLeuGluPheAspAlaGluValGluGluSerGluSer                          
350355360                                                                 
GCCACGCTGCAGCAGTACTACCGAGAAGCCATGATTCAGGGCTACAAC1877                      
AlaThrLeuGlnGlnTyrTyrArgGluAlaMetIleGlnGlyTyrAsn                          
365370375                                                                 
TTTGGGTTTGAGTATCATAAAGAAGTTGTTCGTTTGATGTCTGGGGAA1925                      
PheGlyPheGluTyrHisLysGluValValArgLeuMetSerGlyGlu                          
380385390                                                                 
TTCAGGCAGAAGATAGGAGACAAATATATAACGTTCGCCCAGAAGTGG1973                      
PheArgGlnLysIleGlyAspLysTyrIleThrPheAlaGlnLysTrp                          
395400405                                                                 
ATGAATTACGTGCTGACCAAATGCGAGAGCGGCAGAGGCACAAGACCC2021                      
MetAsnTyrValLeuThrLysCysGluSerGlyArgGlyThrArgPro                          
410415420425                                                              
AGATGGGCCACCCAAGGATTTGATTTCCTACAAGCCATTGAACCTGCC2069                      
ArgTrpAlaThrGlnGlyPheAspPheLeuGlnAlaIleGluProAla                          
430435440                                                                 
TTTATTTCAGCTTTACCAGAAGATGACTTCTTGAGTTTGCAAGCCCTG2117                      
PheIleSerAlaLeuProGluAspAspPheLeuSerLeuGlnAlaLeu                          
445450455                                                                 
ATGAATGAGTGCATCGGGCACGTCATAGGAAAGCCACACAGCCCTGTC2165                      
MetAsnGluCysIleGlyHisValIleGlyLysProHisSerProVal                          
460465470                                                                 
ACAGCTATCCATCGGAACAGCCCCCGCCCTGTGAAGGTGCCCCGATGC2213                      
ThrAlaIleHisArgAsnSerProArgProValLysValProArgCys                          
475480485                                                                 
CACAGTGACCCTCCTAACCCTCACCTCATCATCCCGACTCCAGAGGGA2261                      
HisSerAspProProAsnProHisLeuIleIleProThrProGluGly                          
490495500505                                                              
TTCAGGGGTTCCAGTGTCCCTGAAAACGACCGCTTGGCCTCCATAGCT2309                      
PheArgGlySerSerValProGluAsnAspArgLeuAlaSerIleAla                          
510515520                                                                 
GCAGAACTGCAGTTCAGGTCTCTGAGTCGGCACTCAAGCCCCACGGAA2357                      
AlaGluLeuGlnPheArgSerLeuSerArgHisSerSerProThrGlu                          
525530535                                                                 
GAGCGAGACGAGCCAGCGTATCCTCGGAGTGACTCAAGTGGATCAACT2405                      
GluArgAspGluProAlaTyrProArgSerAspSerSerGlySerThr                          
540545550                                                                 
CGGAGAAGCTGGGAACTTCGAACACTCATCAGCCAGACCAAAGACTCG2453                      
ArgArgSerTrpGluLeuArgThrLeuIleSerGlnThrLysAspSer                          
555560565                                                                 
GCCTCTAAGCAGGGGCCCATAGAAGCTATCCAGAAGTCAGTCCGACTG2501                      
AlaSerLysGlnGlyProIleGluAlaIleGlnLysSerValArgLeu                          
570575580585                                                              
TTTGAAGAGAGGAGGTATCGAGAGATGAGGAGAAAGAATATCATCGGC2549                      
PheGluGluArgArgTyrArgGluMetArgArgLysAsnIleIleGly                          
590595600                                                                 
CAAGTGTGCGATACCCCTAAGTCCTATGATAACGTCATGCATGTTGGA2597                      
GlnValCysAspThrProLysSerTyrAspAsnValMetHisValGly                          
605610615                                                                 
CTGAGGAAGGTGACATTTAAGTGGCAAAGAGGAAACAAAATTGGAGAA2645                      
LeuArgLysValThrPheLysTrpGlnArgGlyAsnLysIleGlyGlu                          
620625630                                                                 
GGACAGTATGGAAAAGTATACACCTGCATCAGTGTTGACACAGGGGAG2693                      
GlyGlnTyrGlyLysValTyrThrCysIleSerValAspThrGlyGlu                          
635640645                                                                 
CTGATGGCCATGAAGGAGATTCGATTTCAGCCTAACGACCACAAGACT2741                      
LeuMetAlaMetLysGluIleArgPheGlnProAsnAspHisLysThr                          
650655660665                                                              
ATCAAGGAGACTGCAGACGAGTTGAAAATATTTGAAGGCATCAAGCAC2789                      
IleLysGluThrAlaAspGluLeuLysIlePheGluGlyIleLysHis                          
670675680                                                                 
CCCAACCTGGTCCGGTATTTTGGCGTGGAGCTTCACAGGGAAGAGATG2837                      
ProAsnLeuValArgTyrPheGlyValGluLeuHisArgGluGluMet                          
685690695                                                                 
TACATCTTCATGGAGTACTGTGATGAGGGTACACTAGAGGAGGTGTCA2885                      
TyrIlePheMetGluTyrCysAspGluGlyThrLeuGluGluValSer                          
700705710                                                                 
CGACTGGGCCTGCAGGAGCACGTCATCAGGTTATATACCAAGCAGATC2933                      
ArgLeuGlyLeuGlnGluHisValIleArgLeuTyrThrLysGlnIle                          
715720725                                                                 
ACTGTCGCCATCAACGTCCTCCATGAGCACGGCATCGTTCACCGAGAC2981                      
ThrValAlaIleAsnValLeuHisGluHisGlyIleValHisArgAsp                          
730735740745                                                              
ATCAAAGGTGCCAATATCTTCCTTACGTCATCTGGACTAATCAAGCTG3029                      
IleLysGlyAlaAsnIlePheLeuThrSerSerGlyLeuIleLysLeu                          
750755760                                                                 
GGAGATTTTGGATGCTCTGTAAAACTTAAAAACAACGCCCAGACCATG3077                      
GlyAspPheGlyCysSerValLysLeuLysAsnAsnAlaGlnThrMet                          
765770775                                                                 
CCCGGAGAGGTGAACAGCACCCTAGGGACAGCAGCTTACATGGCCCCT3125                      
ProGlyGluValAsnSerThrLeuGlyThrAlaAlaTyrMetAlaPro                          
780785790                                                                 
GAAGTTATTACCCGAGCCAAAGGAGAAGGCCACGGACGTGCGGCAGAT3173                      
GluValIleThrArgAlaLysGlyGluGlyHisGlyArgAlaAlaAsp                          
795800805                                                                 
ATCTGGAGTCTGGGGTGCGTCGTCATAGAGATGGTGACTGGCAAGCGG3221                      
IleTrpSerLeuGlyCysValValIleGluMetValThrGlyLysArg                          
810815820825                                                              
CCTTGGCATGAGTATGAACACAACTTTCAGATTATGTACAAGGTGGGG3269                      
ProTrpHisGluTyrGluHisAsnPheGlnIleMetTyrLysValGly                          
830835840                                                                 
ATGGGACACAAGCCACCAATCCCGGAAAGGCTAAGCCCTGAAGGAAAG3317                      
MetGlyHisLysProProIleProGluArgLeuSerProGluGlyLys                          
845850855                                                                 
GCCTTTCTCTCGCACTGCCTGGAAAGTGACCCGAAGATACGGTGGACA3365                      
AlaPheLeuSerHisCysLeuGluSerAspProLysIleArgTrpThr                          
860865870                                                                 
GCCAGCCAGCTCCTCGACCACGCTTTTGTCAAGGTTTGCACAGATGAA3413                      
AlaSerGlnLeuLeuAspHisAlaPheValLysValCysThrAspGlu                          
875880885                                                                 
GAGTGAAGTGAACCAGTCCGTGGCCTAGTAGTGTGTGGACAGAATCCCGTGATC3467                
Glu                                                                       
890                                                                       
ACTACTGTATGTAATATTTACATAAAGACTGCAGCGCAGGCGGCCTTCCTAACCTCCCAG3527          
GACTGAAGACTACAGGGGTGACAAGCCTCACTTCTGCTGCTCCTGTCGCCTGCTGAGTGA3587          
CAGTGCTGAGGTTAAAGGAGCCGCACGTTAAGTGCCATTACTACTGTACACGGCCACCGC3647          
CTCTGTCCCCTCCGACCCTCTCGTGACTGAGAACCAACCGTGTCATCAGCACAGTGTTTT3707          
TGAGCTCCTGGGGTTCAGAAGAACATGTAGTGTTCCCGGGTGTCCGGGACGTTTATTTCA3767          
ACCTCCTGGTCGTTGGCTCTGACTGTGGAGCCTCCTTGTTCGAAAGCTGCAGGTTTGTTA3827          
TGCAAAGGCTCGTAAGTGAAGCTGAAGAAAAGGTTCTTTTTCAATAAATGGTTTATTTTA3887          
GGAAAGCGAAAAAAAAAAAAAAAAAA3913                                            
(2) INFORMATION FOR SEQ ID NO:8:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 890 amino acids                                               
(B) TYPE: amino acid                                                      
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: protein                                               
(ix) FEATURE:                                                             
(A) NAME/KEY: Xaa = Any amino acid                                        
(B) LOCATION: 116                                                         
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:8:                                   
MetLysGlnTyrTyrGlnPheMetLeuGlnGluValLeuGlyGlyLeu                          
151015                                                                    
GluLysThrAspCysAsnMetAspAlaPheGluGluAspLeuGlnLys                          
202530                                                                    
MetLeuMetValTyrPheAspTyrMetArgSerTrpIleGlnMetLeu                          
354045                                                                    
GlnGlnLeuProGlnAlaSerHisSerLeuLysAsnLeuLeuGluGlu                          
505560                                                                    
GluTrpAsnPheThrLysGluIleThrHisTyrIleArgGlyGlyGlu                          
65707580                                                                  
AlaGlnAlaGlyLysLeuPheCysAspIleAlaGlyMetLeuLeuLys                          
859095                                                                    
SerThrGlySerPheLeuGluSerGlyLeuGlnGluSerCysAlaGlu                          
100105110                                                                 
LeuTrpThrXaaAlaAspAspAsnGlyAlaAlaAspGluLeuArgArg                          
115120125                                                                 
SerValIleGluIleSerArgAlaLeuLysGluLeuPheHisGluAla                          
130135140                                                                 
ArgGluArgAlaSerLysAlaLeuGlyPheAlaLysMetLeuArgLys                          
145150155160                                                              
AspLeuGluIleAlaAlaGluPheValLeuSerAlaSerAlaArgGlu                          
165170175                                                                 
LeuLeuAspAlaLeuLysAlaLysGlnTyrValLysValGlnIlePro                          
180185190                                                                 
GlyLeuGluAsnLeuHisValPheValProAspSerLeuAlaGluGlu                          
195200205                                                                 
LysLysIleIleLeuGlnLeuLeuAsnAlaAlaThrGlyLysAspCys                          
210215220                                                                 
SerLysAspProAspAspValPheMetAspAlaPheLeuLeuLeuThr                          
225230235240                                                              
LysHisGlyAspArgAlaArgAspSerGluAspGlyTrpGlyThrTrp                          
245250255                                                                 
GluAlaArgAlaValLysIleValProGlnValGluThrValAspThr                          
260265270                                                                 
LeuArgSerMetGlnValAspAsnLeuLeuLeuValValMetGluSer                          
275280285                                                                 
AlaHisLeuValLeuGlnArgLysAlaPheGlnGlnSerIleGluGly                          
290295300                                                                 
LeuMetThrValArgHisGluGlnThrSerSerGlnProIleIleAla                          
305310315320                                                              
LysGlyLeuGlnGlnLeuLysAsnAspAlaLeuGluLeuCysAsnArg                          
325330335                                                                 
IleSerAspAlaIleAspArgValAspHisMetPheThrLeuGluPhe                          
340345350                                                                 
AspAlaGluValGluGluSerGluSerAlaThrLeuGlnGlnTyrTyr                          
355360365                                                                 
ArgGluAlaMetIleGlnGlyTyrAsnPheGlyPheGluTyrHisLys                          
370375380                                                                 
GluValValArgLeuMetSerGlyGluPheArgGlnLysIleGlyAsp                          
385390395400                                                              
LysTyrIleThrPheAlaGlnLysTrpMetAsnTyrValLeuThrLys                          
405410415                                                                 
CysGluSerGlyArgGlyThrArgProArgTrpAlaThrGlnGlyPhe                          
420425430                                                                 
AspPheLeuGlnAlaIleGluProAlaPheIleSerAlaLeuProGlu                          
435440445                                                                 
AspAspPheLeuSerLeuGlnAlaLeuMetAsnGluCysIleGlyHis                          
450455460                                                                 
ValIleGlyLysProHisSerProValThrAlaIleHisArgAsnSer                          
465470475480                                                              
ProArgProValLysValProArgCysHisSerAspProProAsnPro                          
485490495                                                                 
HisLeuIleIleProThrProGluGlyPheArgGlySerSerValPro                          
500505510                                                                 
GluAsnAspArgLeuAlaSerIleAlaAlaGluLeuGlnPheArgSer                          
515520525                                                                 
LeuSerArgHisSerSerProThrGluGluArgAspGluProAlaTyr                          
530535540                                                                 
ProArgSerAspSerSerGlySerThrArgArgSerTrpGluLeuArg                          
545550555560                                                              
ThrLeuIleSerGlnThrLysAspSerAlaSerLysGlnGlyProIle                          
565570575                                                                 
GluAlaIleGlnLysSerValArgLeuPheGluGluArgArgTyrArg                          
580585590                                                                 
GluMetArgArgLysAsnIleIleGlyGlnValCysAspThrProLys                          
595600605                                                                 
SerTyrAspAsnValMetHisValGlyLeuArgLysValThrPheLys                          
610615620                                                                 
TrpGlnArgGlyAsnLysIleGlyGluGlyGlnTyrGlyLysValTyr                          
625630635640                                                              
ThrCysIleSerValAspThrGlyGluLeuMetAlaMetLysGluIle                          
645650655                                                                 
ArgPheGlnProAsnAspHisLysThrIleLysGluThrAlaAspGlu                          
660665670                                                                 
LeuLysIlePheGluGlyIleLysHisProAsnLeuValArgTyrPhe                          
675680685                                                                 
GlyValGluLeuHisArgGluGluMetTyrIlePheMetGluTyrCys                          
690695700                                                                 
AspGluGlyThrLeuGluGluValSerArgLeuGlyLeuGlnGluHis                          
705710715720                                                              
ValIleArgLeuTyrThrLysGlnIleThrValAlaIleAsnValLeu                          
725730735                                                                 
HisGluHisGlyIleValHisArgAspIleLysGlyAlaAsnIlePhe                          
740745750                                                                 
LeuThrSerSerGlyLeuIleLysLeuGlyAspPheGlyCysSerVal                          
755760765                                                                 
LysLeuLysAsnAsnAlaGlnThrMetProGlyGluValAsnSerThr                          
770775780                                                                 
LeuGlyThrAlaAlaTyrMetAlaProGluValIleThrArgAlaLys                          
785790795800                                                              
GlyGluGlyHisGlyArgAlaAlaAspIleTrpSerLeuGlyCysVal                          
805810815                                                                 
ValIleGluMetValThrGlyLysArgProTrpHisGluTyrGluHis                          
820825830                                                                 
AsnPheGlnIleMetTyrLysValGlyMetGlyHisLysProProIle                          
835840845                                                                 
ProGluArgLeuSerProGluGlyLysAlaPheLeuSerHisCysLeu                          
850855860                                                                 
GluSerAspProLysIleArgTrpThrAlaSerGlnLeuLeuAspHis                          
865870875880                                                              
AlaPheValLysValCysThrAspGluGlu                                            
885890                                                                    
(2) INFORMATION FOR SEQ ID NO:9:                                          
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 4592 base pairs                                               
(B) TYPE: nucleic acid                                                    
(C) STRANDEDNESS: double                                                  
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: cDNA                                                  
(ix) FEATURE:                                                             
(A) NAME/KEY: CDS                                                         
(B) LOCATION: 355..4095                                                   
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:9:                                   
AAGAAGAAGGACAGGGAGCAGAGGGGACAAGAAAACACGGCTGCTTTCTGGTTCAACCGA60            
TCGAACGAACTGATCTGGTTAGAACTGCAGGCCTGGCACGCGGGCCGCACCATCAATGAC120           
CAGGACCTCTTTCTCTACACAGCCCGCCAGGCCATCCCAGACATCATCAATGAGATCCTC180           
ACCTTCAAAGTTAACTACGGGAGCATTGCCTTCTCCAGCAATGGAGCCGGTTTCAACGGG240           
CCCTTGGTAGAAGGCCAGTGCAGAACCCCTCAGGAGACAAACCGTGTGGGCTGCTCATCG300           
TACCACGAGCACCTCCAGCGCCAGAGGGTCTCGTTTGAGCAGGTGAAGCGGATAATG357              
Met                                                                       
1                                                                         
GAGCTGCTGGAGTACATGGAGGCACTTTACCCATCCTTGCAGGCTCTG405                       
GluLeuLeuGluTyrMetGluAlaLeuTyrProSerLeuGlnAlaLeu                          
51015                                                                     
CAGAAGGACTATGAACGGTACGCCGCCAAGGACTTTGAGGACAGAGTG453                       
GlnLysAspTyrGluArgTyrAlaAlaLysAspPheGluAspArgVal                          
202530                                                                    
CAGGCGCTCTGCCTGTGGCTCAACATCACGAAAGATCTAAATCAGAAG501                       
GlnAlaLeuCysLeuTrpLeuAsnIleThrLysAspLeuAsnGlnLys                          
354045                                                                    
CTGCGGATCATGGGCACCGTGCTGGGCATCAAGTTCCTATCAGACATT549                       
LeuArgIleMetGlyThrValLeuGlyIleLysPheLeuSerAspIle                          
50556065                                                                  
GGCTGGCCAGTGAAAGAAATCCCCTCCCCTCGGCCGTCCAAGGGCTAC597                       
GlyTrpProValLysGluIleProSerProArgProSerLysGlyTyr                          
707580                                                                    
GAGCCAGAGGACGAGGTCGAGGACACGGAGGTTGAGCTGAGGGAGCTG645                       
GluProGluAspGluValGluAspThrGluValGluLeuArgGluLeu                          
859095                                                                    
GAGAGCGGGACGGAGGAGAGTGACGAGGAGCCAACCCCCAGTCCGAGG693                       
GluSerGlyThrGluGluSerAspGluGluProThrProSerProArg                          
100105110                                                                 
GTGCCAGAGCTCAGGCTGTCCACAGACACCATCTTGGACAGTCGCTCC741                       
ValProGluLeuArgLeuSerThrAspThrIleLeuAspSerArgSer                          
115120125                                                                 
CAGGGCTGCGTCTCCAGGAAGCTGGAGAGGCTCGAGTCAGAGGAAGAT789                       
GlnGlyCysValSerArgLysLeuGluArgLeuGluSerGluGluAsp                          
130135140145                                                              
TCCATAGGCTGGGGGACAGCGGACTGTGGCCCTGAAGCCAGCAGGCAT837                       
SerIleGlyTrpGlyThrAlaAspCysGlyProGluAlaSerArgHis                          
150155160                                                                 
TGTTTGACTTCTATGTATAGACCATTCGTGGACAAAGCACTGAAGCAA885                       
CysLeuThrSerMetTyrArgProPheValAspLysAlaLeuLysGln                          
165170175                                                                 
ATGGGGCTAAGAAAGTTAATTTTACGACTTCATAAGCTTATGAATGGG933                       
MetGlyLeuArgLysLeuIleLeuArgLeuHisLysLeuMetAsnGly                          
180185190                                                                 
TCCTTGCAAAGAGCTCGTGTAGCTCTGGTGAAGGACGACCGTCCAGTG981                       
SerLeuGlnArgAlaArgValAlaLeuValLysAspAspArgProVal                          
195200205                                                                 
GAGTTCTCTGACTTTCCAGGTCCCATGTGGGGCTCGGATTATGTGCAG1029                      
GluPheSerAspPheProGlyProMetTrpGlySerAspTyrValGln                          
210215220225                                                              
TTGTCGGGAACACCTCCTTCCTCAGAGCAGAAGTGTAGCGCTGTGTCC1077                      
LeuSerGlyThrProProSerSerGluGlnLysCysSerAlaValSer                          
230235240                                                                 
TGGGAAGAACTGAGAGCCATGGACCTGCCTTCCTTTGAGCCCGCCTTC1125                      
TrpGluGluLeuArgAlaMetAspLeuProSerPheGluProAlaPhe                          
245250255                                                                 
CTGGTGCTCTGTCGGGTCCTGCTGAACGTGATCCACGAGTGCCTGAAG1173                      
LeuValLeuCysArgValLeuLeuAsnValIleHisGluCysLeuLys                          
260265270                                                                 
CTGCGGCTGGAACAGAGGCCTGCCGGGGAGCCTTCCCTCTTGAGTATC1221                      
LeuArgLeuGluGlnArgProAlaGlyGluProSerLeuLeuSerIle                          
275280285                                                                 
AAACAGCTAGTGCGAGAGTGTAAAGAGGTCCTAAAGGGCGGGCTCCTG1269                      
LysGlnLeuValArgGluCysLysGluValLeuLysGlyGlyLeuLeu                          
290295300305                                                              
ATGAAGCAGTATTACCAGTTCATGCTGCAGGAGGTCCTGGGCGGACTG1317                      
MetLysGlnTyrTyrGlnPheMetLeuGlnGluValLeuGlyGlyLeu                          
310315320                                                                 
GAGAAGACCGACTGCAACATGGATGCCTTTGAGGAGGACCTGCAGAAG1365                      
GluLysThrAspCysAsnMetAspAlaPheGluGluAspLeuGlnLys                          
325330335                                                                 
ATGCTGATGGTGTATTTTGATTACATGAGAAGCTGGATCCAAATGCTA1413                      
MetLeuMetValTyrPheAspTyrMetArgSerTrpIleGlnMetLeu                          
340345350                                                                 
CAGCAGTTACCTCAGGCTTCCCATAGCTTAAAAAACCTGCTAGAAGAG1461                      
GlnGlnLeuProGlnAlaSerHisSerLeuLysAsnLeuLeuGluGlu                          
355360365                                                                 
GAATGGAATTTCACCAAAGAAATAACCCATTATATCCGTGGCGGAGAA1509                      
GluTrpAsnPheThrLysGluIleThrHisTyrIleArgGlyGlyGlu                          
370375380385                                                              
GCGCAGGCTGGAAAGCTTTTCTGTGACATCGCAGGGATGCTGCTGAAA1557                      
AlaGlnAlaGlyLysLeuPheCysAspIleAlaGlyMetLeuLeuLys                          
390395400                                                                 
TCCACAGGGAGCTTTCTGGAATCCGGCCTGCAGGAGAGCTGTGCTGAG1605                      
SerThrGlySerPheLeuGluSerGlyLeuGlnGluSerCysAlaGlu                          
405410415                                                                 
CTGTGGACCAGCGCCGACGACAACGGTGCTGCCGACGAGCTAAGGAGA1653                      
LeuTrpThrSerAlaAspAspAsnGlyAlaAlaAspGluLeuArgArg                          
420425430                                                                 
TCTGTCATCGAGATCAGCCGAGCACTCAAGGAGCTCTTCCACGAAGCC1701                      
SerValIleGluIleSerArgAlaLeuLysGluLeuPheHisGluAla                          
435440445                                                                 
AGGGAAAGAGCCTCCAAGGCCCTGGGCTTTGCTAAAATGCTGAGGAAG1749                      
ArgGluArgAlaSerLysAlaLeuGlyPheAlaLysMetLeuArgLys                          
450455460465                                                              
GACCTAGAAATAGCAGCAGAGTTCGTGCTATCTGCATCAGCCCGAGAG1797                      
AspLeuGluIleAlaAlaGluPheValLeuSerAlaSerAlaArgGlu                          
470475480                                                                 
CTCCTGGACGCTCTGAAAGCAAAGCAGTATGTTAAGGTACAGATTCCC1845                      
LeuLeuAspAlaLeuLysAlaLysGlnTyrValLysValGlnIlePro                          
485490495                                                                 
GGGTTAGAGAATTTGCACGTGTTTGTCCCCGACAGCCTCGCTGAGGAG1893                      
GlyLeuGluAsnLeuHisValPheValProAspSerLeuAlaGluGlu                          
500505510                                                                 
AAGAAAATTATTTTGCAGCTACTCAATGCTGCCACAGGAAAGGACTGC1941                      
LysLysIleIleLeuGlnLeuLeuAsnAlaAlaThrGlyLysAspCys                          
515520525                                                                 
TCAAAGGATCCAGACGACGTCTTCATGGATGCCTTCCTGCTCCTGACC1989                      
SerLysAspProAspAspValPheMetAspAlaPheLeuLeuLeuThr                          
530535540545                                                              
AAGCATGGGGACCGAGCCCGTGACTCAGAAGATGGCTGGGGCACATGG2037                      
LysHisGlyAspArgAlaArgAspSerGluAspGlyTrpGlyThrTrp                          
550555560                                                                 
GAAGCTCGGGCTGTCAAAATTGTGCCTCAGGTGGAGACTGTGGACACC2085                      
GluAlaArgAlaValLysIleValProGlnValGluThrValAspThr                          
565570575                                                                 
CTGAGAAGCATGCAGGTGGACAACCTTCTGCTGGTTGTCATGGAGTCT2133                      
LeuArgSerMetGlnValAspAsnLeuLeuLeuValValMetGluSer                          
580585590                                                                 
GCTCACCTCGTACTTCAGAGAAAAGCCTTCCAGCAGTCCATTGAGGGG2181                      
AlaHisLeuValLeuGlnArgLysAlaPheGlnGlnSerIleGluGly                          
595600605                                                                 
CTGATGACTGTACGCCATGAGCAGACATCTAGCCAGCCCATCATCGCC2229                      
LeuMetThrValArgHisGluGlnThrSerSerGlnProIleIleAla                          
610615620625                                                              
AAAGGTTTGCAGCAGCTCAAGAACGATGCACTTGAGCTATGCAACAGA2277                      
LysGlyLeuGlnGlnLeuLysAsnAspAlaLeuGluLeuCysAsnArg                          
630635640                                                                 
ATCAGCGATGCCATCGACCGTGTGGACCACATGTTCACCCTGGAGTTC2325                      
IleSerAspAlaIleAspArgValAspHisMetPheThrLeuGluPhe                          
645650655                                                                 
GATGCTGAGGTCGAGGAGTCTGAGTCGGCCACGCTGCAGCAGTACTAC2373                      
AspAlaGluValGluGluSerGluSerAlaThrLeuGlnGlnTyrTyr                          
660665670                                                                 
CGAGAAGCCATGATTCAGGGCTACAACTTTGGGTTTGAGTATCATAAA2421                      
ArgGluAlaMetIleGlnGlyTyrAsnPheGlyPheGluTyrHisLys                          
675680685                                                                 
GAAGTTGTTCGTTTGATGTCTGGGGAATTCAGGCAGAAGATAGGAGAC2469                      
GluValValArgLeuMetSerGlyGluPheArgGlnLysIleGlyAsp                          
690695700705                                                              
AAATATATAAGCTTCGCCCAGAAGTGGATGAATTACGTGCTGACCAAA2517                      
LysTyrIleSerPheAlaGlnLysTrpMetAsnTyrValLeuThrLys                          
710715720                                                                 
TGCGAGAGCGGCAGAGGCACAAGACCCAGATGGGCCACCCAAGGATTT2565                      
CysGluSerGlyArgGlyThrArgProArgTrpAlaThrGlnGlyPhe                          
725730735                                                                 
GATTTCCTACAAGCCATTGAACCTGCCTTTATTTCAGCTTTACCAGAA2613                      
AspPheLeuGlnAlaIleGluProAlaPheIleSerAlaLeuProGlu                          
740745750                                                                 
GATGACTTCTTGAGTTTGCAAGCCCTGATGAATGAGTGCATCGGGCAC2661                      
AspAspPheLeuSerLeuGlnAlaLeuMetAsnGluCysIleGlyHis                          
755760765                                                                 
GTCATAGGAAAGCCACACAGCCCTGTCACAGCTATCCATCGGAACAGC2709                      
ValIleGlyLysProHisSerProValThrAlaIleHisArgAsnSer                          
770775780785                                                              
CCCCGCCCTGTGAAGGTGCCCCGATGCCACAGTGACCCTCCTAACCCT2757                      
ProArgProValLysValProArgCysHisSerAspProProAsnPro                          
790795800                                                                 
CACCTCATCATCCCGACTCCAGAGGGATTCAGCACCCGGAGCGTGCCT2805                      
HisLeuIleIleProThrProGluGlyPheSerThrArgSerValPro                          
805810815                                                                 
TCCGACGCTCGGACCCATGGCAACTCTGTTGCTGCTGCTGCTGCTGTT2853                      
SerAspAlaArgThrHisGlyAsnSerValAlaAlaAlaAlaAlaVal                          
820825830                                                                 
CGTGCCGCCGCCACCACTGCTGCTGGCCGCCCTGGCCCAGGTGGTGGT2901                      
ArgAlaAlaAlaThrThrAlaAlaGlyArgProGlyProGlyGlyGly                          
835840845                                                                 
GACTCTGTGCCAGCCAAACCTGTCAACACTGCCCCTGATACCAGGGGT2949                      
AspSerValProAlaLysProValAsnThrAlaProAspThrArgGly                          
850855860865                                                              
TCCAGTGTCCCTGAAAACGACCGCTTGGCCTCCATAGCTGCAGAACTG2997                      
SerSerValProGluAsnAspArgLeuAlaSerIleAlaAlaGluLeu                          
870875880                                                                 
CAGTTCAGGTCTCTGAGTCGGCACTCAAGCCCCACGGAAGAGCGAGAC3045                      
GlnPheArgSerLeuSerArgHisSerSerProThrGluGluArgAsp                          
885890895                                                                 
GAGCCAGCGTATCCTCGGAGTGACTCAAGTGGATCAACTCGGAGAAGC3093                      
GluProAlaTyrProArgSerAspSerSerGlySerThrArgArgSer                          
900905910                                                                 
TGGGAACTTCGAACACTCATCAGCCAGACCAAAGACTCGGCCTCTAAG3141                      
TrpGluLeuArgThrLeuIleSerGlnThrLysAspSerAlaSerLys                          
915920925                                                                 
CAGGGGCCCATAGAAGCTATCCAGAAGTCAGTCCGACTGTTTGAAGAG3189                      
GlnGlyProIleGluAlaIleGlnLysSerValArgLeuPheGluGlu                          
930935940945                                                              
AGGAGGTATCGAGAGATGAGGAGAAAGAATATCATCGGCCAAGTGTGC3237                      
ArgArgTyrArgGluMetArgArgLysAsnIleIleGlyGlnValCys                          
950955960                                                                 
GATACCCCTAAGTCCTATGATAACGTCATGCATGTTGGACTGAGGAAG3285                      
AspThrProLysSerTyrAspAsnValMetHisValGlyLeuArgLys                          
965970975                                                                 
GTGACATTTAAGTGGCAAAGAGGAAACAAAATTGGAGAAGGACAGTAT3333                      
ValThrPheLysTrpGlnArgGlyAsnLysIleGlyGluGlyGlnTyr                          
980985990                                                                 
GGAAAAGTATACACCTGCATCAGTGTTGACACAGGGGAGCTGATGGCC3381                      
GlyLysValTyrThrCysIleSerValAspThrGlyGluLeuMetAla                          
99510001005                                                               
ATGAAGGAGATTCGATTTCAGCCTAACGACCACAAGACTATCAAGGAG3429                      
MetLysGluIleArgPheGlnProAsnAspHisLysThrIleLysGlu                          
1010101510201025                                                          
ACTGCAGACGAGTTGAAAATATTTGAAGGCATCAAGCACCCCAACCTG3477                      
ThrAlaAspGluLeuLysIlePheGluGlyIleLysHisProAsnLeu                          
103010351040                                                              
GTCCGGTATTTTGGCGTGGAGCTTCACAGGGAAGAGATGTACATCTTC3525                      
ValArgTyrPheGlyValGluLeuHisArgGluGluMetTyrIlePhe                          
104510501055                                                              
ATGGAGTACTGTGATGAGGGTACACTAGAGGAGGTGTCACGACTGGGC3573                      
MetGluTyrCysAspGluGlyThrLeuGluGluValSerArgLeuGly                          
106010651070                                                              
CTGCAGGAGCACGTCATCAGGTTATATACCAAGCAGATCACTGTCGCC3621                      
LeuGlnGluHisValIleArgLeuTyrThrLysGlnIleThrValAla                          
107510801085                                                              
ATCAACGTCCTCCATGAGCACGGCATCGTTCACCGAGACATCAAAGGT3669                      
IleAsnValLeuHisGluHisGlyIleValHisArgAspIleLysGly                          
1090109511001105                                                          
GCCAATATCTTCCTTACGTCATCTGGACTAATCAAGCTGGGAGATTTT3717                      
AlaAsnIlePheLeuThrSerSerGlyLeuIleLysLeuGlyAspPhe                          
111011151120                                                              
GGATGCTCTGTAAAACTTAAAAACAACGCCCAGACCATGCCCGGAGAG3765                      
GlyCysSerValLysLeuLysAsnAsnAlaGlnThrMetProGlyGlu                          
112511301135                                                              
GTGAACAGCACCCTAGGGACAGCAGCTTACATGGCCCCTGAAGTTATT3813                      
ValAsnSerThrLeuGlyThrAlaAlaTyrMetAlaProGluValIle                          
114011451150                                                              
ACCCGAGCCAAAGGAGAAGGCCACGGACGTGCGGCAGATATCTGGAGT3861                      
ThrArgAlaLysGlyGluGlyHisGlyArgAlaAlaAspIleTrpSer                          
115511601165                                                              
CTGGGGTGCGTCGTCATAGAGATGGTGACTGGCAAGCGGCCTTGGCAT3909                      
LeuGlyCysValValIleGluMetValThrGlyLysArgProTrpHis                          
1170117511801185                                                          
GAGTATGAACACAACTTTCAGATTATGTACAAGGTGGGGATGGGACAC3957                      
GluTyrGluHisAsnPheGlnIleMetTyrLysValGlyMetGlyHis                          
119011951200                                                              
AAGCCACCAATCCCGGAAAGGCTAAGCCCTGAAGGAAAGGCCTTTCTC4005                      
LysProProIleProGluArgLeuSerProGluGlyLysAlaPheLeu                          
120512101215                                                              
TCGCACTGCCTGGAAAGTGACCCGAAGATACGGTGGACAGCCAGCCAG4053                      
SerHisCysLeuGluSerAspProLysIleArgTrpThrAlaSerGln                          
122012251230                                                              
CTCCTCGACCACGCTTTTGTCAAGGTTTGCACAGATGAAGAG4095                            
LeuLeuAspHisAlaPheValLysValCysThrAspGluGlu                                
123512401245                                                              
TGAAGTGAACCAGTCCGTGGCCTAGTAGTGTGTGGACAGAATCCCGTGATCACTACTGTA4155          
TGTAATATTTACATAAAGACTGCAGCGCAGGCGGCCTTCCTAACCTCCCAGGACTGAAGA4215          
CTACAGGGGTGACAAGCCTCACTTCTGCTGCTCCTGTCGCCTGCTGAGTGACAGTGCTGA4275          
GGTTAAAGGAGCCGCACGTTAAGTGCCATTACTACTGTACACGGCCACCGCCTCTGTCCC4335          
CTCCGACCCTCTCGTGACTGAGAACCAACCGTGTCATCAGCACAGTGTTTTTGAGCTCCT4395          
GGGGTTCAGAAGAACATGTAGTGTTCCCGGGTGTCCGGGACGTTTATTTCAACCTCCTGG4455          
TCGTTGGCTCTGACTGTGGAGCCTCCTTGTTCGAAAGCTGCAGGTTTGTTATGCAAAGGC4515          
TCGTAAGTGAAGCTGAAGAAAAGGTTCTTTTTCAATAAATGGTTTATTTTAGGAAAGCGA4575          
AAAAAAAAAAAAAAAAA4592                                                     
(2) INFORMATION FOR SEQ ID NO:10:                                         
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 1247 amino acids                                              
(B) TYPE: amino acid                                                      
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: protein                                               
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:10:                                  
MetGluLeuLeuGluTyrMetGluAlaLeuTyrProSerLeuGlnAla                          
151015                                                                    
LeuGlnLysAspTyrGluArgTyrAlaAlaLysAspPheGluAspArg                          
202530                                                                    
ValGlnAlaLeuCysLeuTrpLeuAsnIleThrLysAspLeuAsnGln                          
354045                                                                    
LysLeuArgIleMetGlyThrValLeuGlyIleLysPheLeuSerAsp                          
505560                                                                    
IleGlyTrpProValLysGluIleProSerProArgProSerLysGly                          
65707580                                                                  
TyrGluProGluAspGluValGluAspThrGluValGluLeuArgGlu                          
859095                                                                    
LeuGluSerGlyThrGluGluSerAspGluGluProThrProSerPro                          
100105110                                                                 
ArgValProGluLeuArgLeuSerThrAspThrIleLeuAspSerArg                          
115120125                                                                 
SerGlnGlyCysValSerArgLysLeuGluArgLeuGluSerGluGlu                          
130135140                                                                 
AspSerIleGlyTrpGlyThrAlaAspCysGlyProGluAlaSerArg                          
145150155160                                                              
HisCysLeuThrSerMetTyrArgProPheValAspLysAlaLeuLys                          
165170175                                                                 
GlnMetGlyLeuArgLysLeuIleLeuArgLeuHisLysLeuMetAsn                          
180185190                                                                 
GlySerLeuGlnArgAlaArgValAlaLeuValLysAspAspArgPro                          
195200205                                                                 
ValGluPheSerAspPheProGlyProMetTrpGlySerAspTyrVal                          
210215220                                                                 
GlnLeuSerGlyThrProProSerSerGluGlnLysCysSerAlaVal                          
225230235240                                                              
SerTrpGluGluLeuArgAlaMetAspLeuProSerPheGluProAla                          
245250255                                                                 
PheLeuValLeuCysArgValLeuLeuAsnValIleHisGluCysLeu                          
260265270                                                                 
LysLeuArgLeuGluGlnArgProAlaGlyGluProSerLeuLeuSer                          
275280285                                                                 
IleLysGlnLeuValArgGluCysLysGluValLeuLysGlyGlyLeu                          
290295300                                                                 
LeuMetLysGlnTyrTyrGlnPheMetLeuGlnGluValLeuGlyGly                          
305310315320                                                              
LeuGluLysThrAspCysAsnMetAspAlaPheGluGluAspLeuGln                          
325330335                                                                 
LysMetLeuMetValTyrPheAspTyrMetArgSerTrpIleGlnMet                          
340345350                                                                 
LeuGlnGlnLeuProGlnAlaSerHisSerLeuLysAsnLeuLeuGlu                          
355360365                                                                 
GluGluTrpAsnPheThrLysGluIleThrHisTyrIleArgGlyGly                          
370375380                                                                 
GluAlaGlnAlaGlyLysLeuPheCysAspIleAlaGlyMetLeuLeu                          
385390395400                                                              
LysSerThrGlySerPheLeuGluSerGlyLeuGlnGluSerCysAla                          
405410415                                                                 
GluLeuTrpThrSerAlaAspAspAsnGlyAlaAlaAspGluLeuArg                          
420425430                                                                 
ArgSerValIleGluIleSerArgAlaLeuLysGluLeuPheHisGlu                          
435440445                                                                 
AlaArgGluArgAlaSerLysAlaLeuGlyPheAlaLysMetLeuArg                          
450455460                                                                 
LysAspLeuGluIleAlaAlaGluPheValLeuSerAlaSerAlaArg                          
465470475480                                                              
GluLeuLeuAspAlaLeuLysAlaLysGlnTyrValLysValGlnIle                          
485490495                                                                 
ProGlyLeuGluAsnLeuHisValPheValProAspSerLeuAlaGlu                          
500505510                                                                 
GluLysLysIleIleLeuGlnLeuLeuAsnAlaAlaThrGlyLysAsp                          
515520525                                                                 
CysSerLysAspProAspAspValPheMetAspAlaPheLeuLeuLeu                          
530535540                                                                 
ThrLysHisGlyAspArgAlaArgAspSerGluAspGlyTrpGlyThr                          
545550555560                                                              
TrpGluAlaArgAlaValLysIleValProGlnValGluThrValAsp                          
565570575                                                                 
ThrLeuArgSerMetGlnValAspAsnLeuLeuLeuValValMetGlu                          
580585590                                                                 
SerAlaHisLeuValLeuGlnArgLysAlaPheGlnGlnSerIleGlu                          
595600605                                                                 
GlyLeuMetThrValArgHisGluGlnThrSerSerGlnProIleIle                          
610615620                                                                 
AlaLysGlyLeuGlnGlnLeuLysAsnAspAlaLeuGluLeuCysAsn                          
625630635640                                                              
ArgIleSerAspAlaIleAspArgValAspHisMetPheThrLeuGlu                          
645650655                                                                 
PheAspAlaGluValGluGluSerGluSerAlaThrLeuGlnGlnTyr                          
660665670                                                                 
TyrArgGluAlaMetIleGlnGlyTyrAsnPheGlyPheGluTyrHis                          
675680685                                                                 
LysGluValValArgLeuMetSerGlyGluPheArgGlnLysIleGly                          
690695700                                                                 
AspLysTyrIleSerPheAlaGlnLysTrpMetAsnTyrValLeuThr                          
705710715720                                                              
LysCysGluSerGlyArgGlyThrArgProArgTrpAlaThrGlnGly                          
725730735                                                                 
PheAspPheLeuGlnAlaIleGluProAlaPheIleSerAlaLeuPro                          
740745750                                                                 
GluAspAspPheLeuSerLeuGlnAlaLeuMetAsnGluCysIleGly                          
755760765                                                                 
HisValIleGlyLysProHisSerProValThrAlaIleHisArgAsn                          
770775780                                                                 
SerProArgProValLysValProArgCysHisSerAspProProAsn                          
785790795800                                                              
ProHisLeuIleIleProThrProGluGlyPheSerThrArgSerVal                          
805810815                                                                 
ProSerAspAlaArgThrHisGlyAsnSerValAlaAlaAlaAlaAla                          
820825830                                                                 
ValArgAlaAlaAlaThrThrAlaAlaGlyArgProGlyProGlyGly                          
835840845                                                                 
GlyAspSerValProAlaLysProValAsnThrAlaProAspThrArg                          
850855860                                                                 
GlySerSerValProGluAsnAspArgLeuAlaSerIleAlaAlaGlu                          
865870875880                                                              
LeuGlnPheArgSerLeuSerArgHisSerSerProThrGluGluArg                          
885890895                                                                 
AspGluProAlaTyrProArgSerAspSerSerGlySerThrArgArg                          
900905910                                                                 
SerTrpGluLeuArgThrLeuIleSerGlnThrLysAspSerAlaSer                          
915920925                                                                 
LysGlnGlyProIleGluAlaIleGlnLysSerValArgLeuPheGlu                          
930935940                                                                 
GluArgArgTyrArgGluMetArgArgLysAsnIleIleGlyGlnVal                          
945950955960                                                              
CysAspThrProLysSerTyrAspAsnValMetHisValGlyLeuArg                          
965970975                                                                 
LysValThrPheLysTrpGlnArgGlyAsnLysIleGlyGluGlyGln                          
980985990                                                                 
TyrGlyLysValTyrThrCysIleSerValAspThrGlyGluLeuMet                          
99510001005                                                               
AlaMetLysGluIleArgPheGlnProAsnAspHisLysThrIleLys                          
101010151020                                                              
GluThrAlaAspGluLeuLysIlePheGluGlyIleLysHisProAsn                          
1025103010351040                                                          
LeuValArgTyrPheGlyValGluLeuHisArgGluGluMetTyrIle                          
104510501055                                                              
PheMetGluTyrCysAspGluGlyThrLeuGluGluValSerArgLeu                          
106010651070                                                              
GlyLeuGlnGluHisValIleArgLeuTyrThrLysGlnIleThrVal                          
107510801085                                                              
AlaIleAsnValLeuHisGluHisGlyIleValHisArgAspIleLys                          
109010951100                                                              
GlyAlaAsnIlePheLeuThrSerSerGlyLeuIleLysLeuGlyAsp                          
1105111011151120                                                          
PheGlyCysSerValLysLeuLysAsnAsnAlaGlnThrMetProGly                          
112511301135                                                              
GluValAsnSerThrLeuGlyThrAlaAlaTyrMetAlaProGluVal                          
114011451150                                                              
IleThrArgAlaLysGlyGluGlyHisGlyArgAlaAlaAspIleTrp                          
115511601165                                                              
SerLeuGlyCysValValIleGluMetValThrGlyLysArgProTrp                          
117011751180                                                              
HisGluTyrGluHisAsnPheGlnIleMetTyrLysValGlyMetGly                          
1185119011951200                                                          
HisLysProProIleProGluArgLeuSerProGluGlyLysAlaPhe                          
120512101215                                                              
LeuSerHisCysLeuGluSerAspProLysIleArgTrpThrAlaSer                          
122012251230                                                              
GlnLeuLeuAspHisAlaPheValLysValCysThrAspGluGlu                             
123512401245                                                              
(2) INFORMATION FOR SEQ ID NO:11:                                         
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 2503 base pairs                                               
(B) TYPE: nucleic acid                                                    
(C) STRANDEDNESS: double                                                  
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: cDNA                                                  
(ix) FEATURE:                                                             
(A) NAME/KEY: CDS                                                         
(B) LOCATION: 466..2325                                                   
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:11:                                  
GGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGAC60            
GATCCAGCGGCAGAGTCGCCGCTTCCGCTTCGCTGCTTCTCCGGTCGGCGACGCGGGCCC120           
GGGGCTTCCTTTTCATCGGCCCAGCTTATTCCGCGGGCCCCGGGGCTGCAGCTACCCAGA180           
AGCGGCGAAGAGGCCCTGGGCTGCGCGCCCGCTGTCCCATGTGAAGCAGGTTGGGCCTGG240           
TCCCCGGCCCGTGCCCGGTTGTCTGCGGCCCTTCAGGCCTCAGGGACCCCCGCGAGGCGC300           
TGCTCCTGGGGGGCGCGGTGACAGGCCGTGCGGGGGCGGAGGGGCCAGCTCGGTGGCCTC360           
CTCTCGGCCCTCGCGTCCGCGATCCCGCCCAGCGGCCGGGCAATAAAGAATGTTGATGGG420           
AGAACCATTTTCCTAATTTTCAAATTATTGAGCTGGTCGCGCATAATGGATGAT474                 
MetAspAsp                                                                 
1                                                                         
CAGCAAGCTTTGAATTCAATCATGCAAGATTTGGCTGTCCTTCATAAG522                       
GlnGlnAlaLeuAsnSerIleMetGlnAspLeuAlaValLeuHisLys                          
51015                                                                     
GCCAGTCGGCCAGCATTATCTTTACAAGAAACCAGGAAAGCAAAACCT570                       
AlaSerArgProAlaLeuSerLeuGlnGluThrArgLysAlaLysPro                          
20253035                                                                  
TCATCACCAAAAAAACAGAATGATGTTCGAGTCAAATTTGAACATAGA618                       
SerSerProLysLysGlnAsnAspValArgValLysPheGluHisArg                          
404550                                                                    
GGAGAAAAAAGGATCCTGCAGGTTACTAGACCAGTTAAACTAGAAGAC666                       
GlyGluLysArgIleLeuGlnValThrArgProValLysLeuGluAsp                          
556065                                                                    
CTGAGATCTAAGTCTAAGATCGCCTTTGGGCAGTCTATGGATCTACAC714                       
LeuArgSerLysSerLysIleAlaPheGlyGlnSerMetAspLeuHis                          
707580                                                                    
TATACCAACAATGAGTTGGTAATTCCGTTAACTACCCAAGATGACTTG762                       
TyrThrAsnAsnGluLeuValIleProLeuThrThrGlnAspAspLeu                          
859095                                                                    
GACAAAGCTGTGGAACTGCTGGATCGCAGTATTCACATGAAGAGTCTC810                       
AspLysAlaValGluLeuLeuAspArgSerIleHisMetLysSerLeu                          
100105110115                                                              
AAGATATTACTTGTAGTAAATGGGAGTACACAGGCTACTAATTTAGAA858                       
LysIleLeuLeuValValAsnGlySerThrGlnAlaThrAsnLeuGlu                          
120125130                                                                 
CCATCACCGTCACCAGAAGATTTGAATAATACACCACTTGGTGCAGAG906                       
ProSerProSerProGluAspLeuAsnAsnThrProLeuGlyAlaGlu                          
135140145                                                                 
AGGAAAAAGCGGCTATCTGTAGTAGGTCCCCCTAATAGGGATAGAAGT954                       
ArgLysLysArgLeuSerValValGlyProProAsnArgAspArgSer                          
150155160                                                                 
TCCCCTCCTCCAGGATACATTCCAGACATACTACACCAGATTGCCCGG1002                      
SerProProProGlyTyrIleProAspIleLeuHisGlnIleAlaArg                          
165170175                                                                 
AATGGGTCATTCACTAGCATCAACAGTGAAGGAGAGTTCATTCCAGAG1050                      
AsnGlySerPheThrSerIleAsnSerGluGlyGluPheIleProGlu                          
180185190195                                                              
AGCATGGACCAAATGCTGGATCCATTGTCTTTAAGCAGCCCTGAAAAT1098                      
SerMetAspGlnMetLeuAspProLeuSerLeuSerSerProGluAsn                          
200205210                                                                 
TCTGGCTCAGGAAGCTGTCCGTCACTTGATAGTCCTTTGGATGGAGAA1146                      
SerGlySerGlySerCysProSerLeuAspSerProLeuAspGlyGlu                          
215220225                                                                 
AGCTACCCAAAATCACGGATGCCTAGGGCACAGAGCTACCCAGATAAT1194                      
SerTyrProLysSerArgMetProArgAlaGlnSerTyrProAspAsn                          
230235240                                                                 
CATCAGGAGTTTACAGACTATGATAACCCCATTTTTGAGAAATTTGGA1242                      
HisGlnGluPheThrAspTyrAspAsnProIlePheGluLysPheGly                          
245250255                                                                 
AAAGGAGGAACATATCCAAGAAGGTACCACGTTTCCTATCATCACCAG1290                      
LysGlyGlyThrTyrProArgArgTyrHisValSerTyrHisHisGln                          
260265270275                                                              
GAGTATAATGACGGTCGGAAGACTTTTCCAAGAGCTAGAAGGACCCAG1338                      
GluTyrAsnAspGlyArgLysThrPheProArgAlaArgArgThrGln                          
280285290                                                                 
GGCACCAGTTTCCGGTCTCCTGTGAGCTTCAGTCCTACTGATCACTCC1386                      
GlyThrSerPheArgSerProValSerPheSerProThrAspHisSer                          
295300305                                                                 
TTAAGCACTAGTAGTGGAAGCAGTGTCTTTACCCCAGAGTATGACGAC1434                      
LeuSerThrSerSerGlySerSerValPheThrProGluTyrAspAsp                          
310315320                                                                 
AGTCGAATAAGAAGACGGGGGAGTGACATAGACAATCCTACTTTGACT1482                      
SerArgIleArgArgArgGlySerAspIleAspAsnProThrLeuThr                          
325330335                                                                 
GTCACAGACATCAGCCCACCCAGCCGTTCACCTCGAGCTCCGACCAAC1530                      
ValThrAspIleSerProProSerArgSerProArgAlaProThrAsn                          
340345350355                                                              
TGGAGACTGGGCAAGCTGCTTGGCCAAGGAGCTTTTGGTAGGGTCTAC1578                      
TrpArgLeuGlyLysLeuLeuGlyGlnGlyAlaPheGlyArgValTyr                          
360365370                                                                 
CTCTGCTATGATGTTGATACCGGAAGAGAGCTGGCTGTTAAGCAAGTT1626                      
LeuCysTyrAspValAspThrGlyArgGluLeuAlaValLysGlnVal                          
375380385                                                                 
CAGTTTAACCCTGAGAGCCCAGAGACCAGCAAGGAAGTAAATGCACTT1674                      
GlnPheAsnProGluSerProGluThrSerLysGluValAsnAlaLeu                          
390395400                                                                 
GAGTGTGAAATTCAGTTGTTGAAAAACTTGTTGCATGAGCGAATTGTT1722                      
GluCysGluIleGlnLeuLeuLysAsnLeuLeuHisGluArgIleVal                          
405410415                                                                 
CAGTATTATGGCTGTTTGAGGGATCCTCAGGAGAAAACACTTTCCATC1770                      
GlnTyrTyrGlyCysLeuArgAspProGlnGluLysThrLeuSerIle                          
420425430435                                                              
TTTATGGAGTATATGCCAGGGGGTTCAATTAAGGACCAACTAAAAGCC1818                      
PheMetGluTyrMetProGlyGlySerIleLysAspGlnLeuLysAla                          
440445450                                                                 
TACGGAGCTCTTACTGAGAACGTGACGAGGAAGTACACCCGTCAGATT1866                      
TyrGlyAlaLeuThrGluAsnValThrArgLysTyrThrArgGlnIle                          
455460465                                                                 
CTGGAGGGGGTCCATTATTTGCATAGTAATATGATTGTCCATAGAGAT1914                      
LeuGluGlyValHisTyrLeuHisSerAsnMetIleValHisArgAsp                          
470475480                                                                 
ATCAAAGGAGCAAATATCTTAAGGGATTCCACAGGCAATATCAAGTTA1962                      
IleLysGlyAlaAsnIleLeuArgAspSerThrGlyAsnIleLysLeu                          
485490495                                                                 
GGAGACTTTGGGGCTAGTAAACGGCTTCAGACCATCTGTCTCTCAGGC2010                      
GlyAspPheGlyAlaSerLysArgLeuGlnThrIleCysLeuSerGly                          
500505510515                                                              
ACAGGAATGAAGTCTGTCACAGGCACGCCATACTGGATGAGTCCTGAG2058                      
ThrGlyMetLysSerValThrGlyThrProTyrTrpMetSerProGlu                          
520525530                                                                 
GTCATCAGTGGAGAAGGCTATGGAAGAAAAGCAGACATCTGGAGTGTA2106                      
ValIleSerGlyGluGlyTyrGlyArgLysAlaAspIleTrpSerVal                          
535540545                                                                 
GCATGTACTGTGGTAGAAATGCTAACTGAAAAGCCACCTTGGGCTGAA2154                      
AlaCysThrValValGluMetLeuThrGluLysProProTrpAlaGlu                          
550555560                                                                 
TTTGAAGCAATGGCTGCCATCTTTAAGATCGCCACTCAGCCAACGAAC2202                      
PheGluAlaMetAlaAlaIlePheLysIleAlaThrGlnProThrAsn                          
565570575                                                                 
CCAAAGCTGCCACCTCATGTCTCAGACTATACTCGGGACTTCCTCAAA2250                      
ProLysLeuProProHisValSerAspTyrThrArgAspPheLeuLys                          
580585590595                                                              
CGGATTTTTGTAGAGGCCAAACTTCGACCTTCAGCGGAGGAGCTCTTG2298                      
ArgIlePheValGluAlaLysLeuArgProSerAlaGluGluLeuLeu                          
600605610                                                                 
CGGCACATGTTTGTGCATTATCACTAGCAGCGGCGGCTTCGGTCCTCCACCAGC2352                
ArgHisMetPheValHisTyrHis                                                  
615620                                                                    
TCCATCCTCGCGGCCACCTTCTCTCTTACTGCACTTTCCTTTTTTATAAAAAAGAGAGAT2412          
GGGGAGAAAAAGACAAGAGGGAAAATATTTCTCTTGATTCTTGGTTAAATTTGTTTAATA2472          
ATAATAGTAAACTAAAAAAAAAAAAAAAAAA2503                                       
(2) INFORMATION FOR SEQ ID NO:12:                                         
(i) SEQUENCE CHARACTERISTICS:                                             
(A) LENGTH: 619 amino acids                                               
(B) TYPE: amino acid                                                      
(D) TOPOLOGY: linear                                                      
(ii) MOLECULE TYPE: protein                                               
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:12:                                  
MetAspAspGlnGlnAlaLeuAsnSerIleMetGlnAspLeuAlaVal                          
151015                                                                    
LeuHisLysAlaSerArgProAlaLeuSerLeuGlnGluThrArgLys                          
202530                                                                    
AlaLysProSerSerProLysLysGlnAsnAspValArgValLysPhe                          
354045                                                                    
GluHisArgGlyGluLysArgIleLeuGlnValThrArgProValLys                          
505560                                                                    
LeuGluAspLeuArgSerLysSerLysIleAlaPheGlyGlnSerMet                          
65707580                                                                  
AspLeuHisTyrThrAsnAsnGluLeuValIleProLeuThrThrGln                          
859095                                                                    
AspAspLeuAspLysAlaValGluLeuLeuAspArgSerIleHisMet                          
100105110                                                                 
LysSerLeuLysIleLeuLeuValValAsnGlySerThrGlnAlaThr                          
115120125                                                                 
AsnLeuGluProSerProSerProGluAspLeuAsnAsnThrProLeu                          
130135140                                                                 
GlyAlaGluArgLysLysArgLeuSerValValGlyProProAsnArg                          
145150155160                                                              
AspArgSerSerProProProGlyTyrIleProAspIleLeuHisGln                          
165170175                                                                 
IleAlaArgAsnGlySerPheThrSerIleAsnSerGluGlyGluPhe                          
180185190                                                                 
IleProGluSerMetAspGlnMetLeuAspProLeuSerLeuSerSer                          
195200205                                                                 
ProGluAsnSerGlySerGlySerCysProSerLeuAspSerProLeu                          
210215220                                                                 
AspGlyGluSerTyrProLysSerArgMetProArgAlaGlnSerTyr                          
225230235240                                                              
ProAspAsnHisGlnGluPheThrAspTyrAspAsnProIlePheGlu                          
245250255                                                                 
LysPheGlyLysGlyGlyThrTyrProArgArgTyrHisValSerTyr                          
260265270                                                                 
HisHisGlnGluTyrAsnAspGlyArgLysThrPheProArgAlaArg                          
275280285                                                                 
ArgThrGlnGlyThrSerPheArgSerProValSerPheSerProThr                          
290295300                                                                 
AspHisSerLeuSerThrSerSerGlySerSerValPheThrProGlu                          
305310315320                                                              
TyrAspAspSerArgIleArgArgArgGlySerAspIleAspAsnPro                          
325330335                                                                 
ThrLeuThrValThrAspIleSerProProSerArgSerProArgAla                          
340345350                                                                 
ProThrAsnTrpArgLeuGlyLysLeuLeuGlyGlnGlyAlaPheGly                          
355360365                                                                 
ArgValTyrLeuCysTyrAspValAspThrGlyArgGluLeuAlaVal                          
370375380                                                                 
LysGlnValGlnPheAsnProGluSerProGluThrSerLysGluVal                          
385390395400                                                              
AsnAlaLeuGluCysGluIleGlnLeuLeuLysAsnLeuLeuHisGlu                          
405410415                                                                 
ArgIleValGlnTyrTyrGlyCysLeuArgAspProGlnGluLysThr                          
420425430                                                                 
LeuSerIlePheMetGluTyrMetProGlyGlySerIleLysAspGln                          
435440445                                                                 
LeuLysAlaTyrGlyAlaLeuThrGluAsnValThrArgLysTyrThr                          
450455460                                                                 
ArgGlnIleLeuGluGlyValHisTyrLeuHisSerAsnMetIleVal                          
465470475480                                                              
HisArgAspIleLysGlyAlaAsnIleLeuArgAspSerThrGlyAsn                          
485490495                                                                 
IleLysLeuGlyAspPheGlyAlaSerLysArgLeuGlnThrIleCys                          
500505510                                                                 
LeuSerGlyThrGlyMetLysSerValThrGlyThrProTyrTrpMet                          
515520525                                                                 
SerProGluValIleSerGlyGluGlyTyrGlyArgLysAlaAspIle                          
530535540                                                                 
TrpSerValAlaCysThrValValGluMetLeuThrGluLysProPro                          
545550555560                                                              
TrpAlaGluPheGluAlaMetAlaAlaIlePheLysIleAlaThrGln                          
565570575                                                                 
ProThrAsnProLysLeuProProHisValSerAspTyrThrArgAsp                          
580585590                                                                 
PheLeuLysArgIlePheValGluAlaLysLeuArgProSerAlaGlu                          
595600605                                                                 
GluLeuLeuArgHisMetPheValHisTyrHis                                         
610615                                                                    
__________________________________________________________________________

Claims (30)

What is claimed:
1. An assay for identifying compounds which regulate signal transduction by a mitogen ERK kinase kinase (MEKK), comprising:
(a) providing a reaction mixture comprising a mammalian MEKK polypeptide;
(b) contacting the reaction mixture with a test compound; and
(c) determining the effect of the test compound on an indicator of signal transduction by the mammalian MEKK polypeptide in the reaction mixture to thereby identify a compound which regulates signal transduction by an MEKK.
2. The assay of claim 1, wherein the mammalian MEKK polypeptide comprises an amino acid sequence having at least 75% identity with a kinase catalytic domain of an MEKK polypeptide selected from the group consisting of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, and SEQ ID NO:12.
3. The assay of claim 1, wherein the mammalian MEKK polypeptide comprises an amino acid sequence having at least 85% identity with a kinase catalytic domain of an MEKK polypeptide selected from the group consisting of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, and SEQ ID NO:12.
4. The assay of claim 1, wherein the mammalian MEKK polypeptide comprises an amino acid sequence having at least 75% identity with a regulatory domain of an MEKK polypeptide selected from the group consisting of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, and SEQ ID NO:12.
5. The assay of claim 1, wherein the mammalian MEKK polypeptide comprises an amino acid sequence having at least 85% identity with a regulatory domain of an MEKK polypeptide selected from the group consisting of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, and SEQ ID NO:12.
6. The assay of claim 1, wherein the mammalian MEKK polypeptide is encoded by a nucleic acid molecule which hybridizes under highly stringent conditions with a nucleic acid molecule selected from the group consisting of SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5, SEQ ID NO:7, SEQ ID NO:9, and SEQ ID NO:11.
7. An assay for identifying compounds having potential to regulate signal transduction by a mitogen ERK kinase kinase (MEKK), comprising:
(a) providing a reaction mixture comprising a mammalian MEKK polypeptide, wherein the reaction mixture is a cell or a cell-free mixture;
(b) contacting the reaction mixture with a test compound; and
(c) determining the effect of the test compound on an indicator of signal transduction by the mammalian MEKK polypeptide in the reaction mixture, wherein the indicator is interaction of the mammalian MEKK polypeptide with an MEKK interactor molecule or activity of a signaling pathway, to thereby identify a compound having potential to regulate signal transduction by an MEKK.
8. The assay of claim 1, wherein:
the reaction mixture comprises:
(i) a mammalian MEKK polypeptide,
(ii) an MEKK interactor molecule which binds to the mammalian MEKK polypeptide, and
(iii) a test compound; and the effect of the test compound on an indicator of signal transduction by the mammalian MEKK polypeptide in the reaction mixture is determined by:
detecting interaction of the mammalian MEKK polypeptide with the MEKK interactor molecule, wherein a change in the level of interaction of the mammalian MEKK polypeptide and MEKK interactor molecule in the presence of the test compound, relative to the level of interaction in the absence of the test compound, indicates that the test compound has the potential to regulate signal transduction by an MEKK.
9. The assay of claim 8, wherein the reaction mixture is a cell-free mixture.
10. The assay of claim 8, wherein the reaction mixture is a recombinant cell.
11. The assay of claim 8, wherein the MEKK interactor molecule is a polypeptide which specifically binds to the mammalian MEKK polypeptide.
12. The assay of any of claims 8, 9, or 10, wherein the mammalian MEKK polypeptide is a recombinant polypeptide.
13. The assay of claim 8, wherein the mammalian MEKK polypeptide includes a polypeptide sequence of an MEKK selected from the group consisting of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, SEQ ID NO:12.
14. The assay of any of claims 8, 9 or 10, wherein the step of detecting the interaction of the mammalian MEKK polypeptide with the MEKK interactor molecule includes detecting an enzymatic activity of the mammalian MEKK polypeptide.
15. The assay of any of claims 8, 9 or 10 wherein the step of detecting the interaction of the MEKK interactor molecule with the mammalian MEKK polypeptide comprises detecting, in the reaction mixture, the formation of complexes ("MEKK complexes") including the MEKK interactor molecule and the mammalian MEKK polypeptide.
16. The assay of claim 15, wherein at least one of the mammalian MEKK polypeptide and the MEKK interactor molecule comprises a detectable label, and the level of MEKK complexes formed in the test mixture is quantitated by detecting the label in at least one of the MEKK interactor molecule, the mammalian MEKK polypeptide, and the MEKK complexes.
17. The assay of any of claims 8, 9 or 10, wherein the step of detecting the interaction of the MEKK interactor molecule with the mammalian MEKK polypeptide comprises an immunoassay.
18. The assay of claim 10, wherein the step of detecting the interaction of the MEKK interactor molecule with the mammalian MEKK polypeptide comprises detecting an intracellular signal produced in a signal transduction pathway involving the mammalian MEKK polypeptide.
19. The assay of claim 18, wherein the recombinant cell includes a reporter gene sensitive to MEKK signal transduction.
20. The assay of claim 10, wherein the ability of the test compound to regulate apoptosis of acell is measured.
21. The assay of claim 9, wherein the mammalian MEKK polypeptide is provided as a purified protein.
22. The assay of claim 9, wherein the mammalian MEKK polypeptide is provided as a cell lysate.
23. The assay of claim 8, wherein the MEKK intetactor molecule comprises Ras or a portion thereof.
24. The assay of claim 8, wherein the MEKKF interactor molecule is selected from the group comprising MEK1, MEK2, MKK1, MKK2, MKK3, MKK4, JNKK1, JNKK2, SEK1, SEK2.
25. The assay of claim 10, wherein the recombinant cell includes a heterologous nucleic acid encoding the mammalian MEKK polypeptide.
26. The assay of claim 10, wherein the recombinant cell includes a reporter gene construct comprising a reporter gene in operable linkage with a transcriptional regulatory sequence sensitive to intracellular signals transduced by interaction of the mammalian MEKK polypeptide and the MEKK interactor molecule.
27. The assay of claim 8, wherein the test compound is selected from the group consisting of: protein based, carbohydrate based, lipid based, nucleic acid based, natural organic based, synthetically derived organic based, and antibody based compounds.
28. The assay of claim 8, further comprising the step of preparing a therapeutic composition of a test compound identified in said assay.
29. The assay of claim 8, wherein the test compound is an inhibitor of the interaction between the MEKK interactor molecule and the mammalian MEKK polypeptide.
30. The assay of claim 8, wherein the test compound is a potentiator of the interaction between the MEKK interactor molecule and the mammalian MEKK polypeptide.
US08/472,934 1993-04-15 1995-06-06 Mitogen ERK kinase kinase (MEKK) assay Expired - Fee Related US5753446A (en)

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US08/628,829 US6333170B1 (en) 1993-04-15 1996-04-05 Method and product for regulating cell responsiveness to external signals
US11/799,749 US20080201790A1 (en) 1993-04-15 2007-05-01 Method and product for regulating cell responsiveness to external signals

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US08/049,254 US5405941A (en) 1993-04-15 1993-04-15 MEKK protein, capable of phosphorylating MEK
PCT/US1994/004178 WO1994024159A1 (en) 1993-04-15 1994-04-15 Method and product for regulating cell responsiveness to external signals
PCT/US1994/011690 WO1995028421A1 (en) 1993-04-15 1994-10-14 Method and product for regulating cell responsiveness to external signals
US08/323,460 US5854043A (en) 1993-04-15 1994-10-14 MEKK-related signal transduction kinases
US35451695A 1995-02-21 1995-02-21
US44042195A 1995-05-12 1995-05-12
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