US20190016738A1 - Supramolecular assembly of rigid macrocycles through cooperative hydrogen bond interactions - Google Patents

Supramolecular assembly of rigid macrocycles through cooperative hydrogen bond interactions Download PDF

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US20190016738A1
US20190016738A1 US16/069,940 US201716069940A US2019016738A1 US 20190016738 A1 US20190016738 A1 US 20190016738A1 US 201716069940 A US201716069940 A US 201716069940A US 2019016738 A1 US2019016738 A1 US 2019016738A1
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rigid
macrocycle
enantiomer
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James Fraser Stoddart
Zhichang Liu
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Northwestern University
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D519/00Heterocyclic compounds containing more than one system of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring system not provided for in groups C07D453/00 or C07D455/00
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/06Peri-condensed systems
    • HELECTRICITY
    • H01ELECTRIC ELEMENTS
    • H01MPROCESSES OR MEANS, e.g. BATTERIES, FOR THE DIRECT CONVERSION OF CHEMICAL ENERGY INTO ELECTRICAL ENERGY
    • H01M10/00Secondary cells; Manufacture thereof
    • H01M10/05Accumulators with non-aqueous electrolyte
    • H01M10/052Li-accumulators
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02EREDUCTION OF GREENHOUSE GAS [GHG] EMISSIONS, RELATED TO ENERGY GENERATION, TRANSMISSION OR DISTRIBUTION
    • Y02E60/00Enabling technologies; Technologies with a potential or indirect contribution to GHG emissions mitigation
    • Y02E60/10Energy storage using batteries

Abstract

Provided herein are supramolecular assemblies, the supramolecular assemblies comprising a racemic mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds. Also provided herein are methods for preparing supramolecular assemblies, the method comprising providing a mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds, the mixture of rigid macrocycles comprising a first rigid macrocycle enantiomer and a second rigid macrocycle enantiomer, and providing a solvent.

Description

    CROSS REFERENCE TO RELATED APPLICATIONS
  • This application claims priority benefit from U.S. Application Ser. No. 62/278,800, filed 13 Jan. 2016, the entirety of which is incorporated herein by reference.
  • FIELD OF INVENTION
  • The invention generally relates to supramolecular assemblies. In particular, the invention relates to supramolecular assembly of rigid macrocycles through cooperative [C—H . . . O] interactions.
  • BACKGROUND
  • Low-molecular-weight gelators (LMWGs) are capable of assembling into interwoven fibrillar networks that entrap solvents between strands to form thermoreversible supramolecular gels.[1-10] Chirality has a profound influence on the macroscopic gelation of solvents by facilitating the growth and stabilization of noncovalent helical fibers as well as their interwoven networks, often driven by stereogenic centers present in the molecular structures of chiral LMWGs.[11-13] As a consequence, most of the highly efficient LMWGs, exhibiting strong gelling ability, are composed of enantiomerically pure chiral molecules.[1, 14-16] Generally speaking, the corresponding racemates of these enantiopure chiral gelators, either do not form gels or occasionally form only weak ones that transform readily into precipitates or discrete crystals.[12, 17, 18] The opposite situation, in which a racemate generates a gel, while both its enantiomers are less efficient gelators, or even lack any gelling ability at all, is rare. Although there are a few examples of gels resulting from the assembly of racemic gelators incorporating flexible structures, driven by means of various noncovalent bonding interactions, gels assembled from highly rigid racemic gelators at the behest of multiple weak [C—H . . . O] interactions as the major driving force remain unexplored to the best of our knowledge.[18-26, 27] Kim et al. have reported that rigid achiral cucurbit[7]uril (CB[7]) can act as a hydrogelator, but only in the presence of mineral acids.[28] The relationship between stereochemistry and gelation, however, has yet to be fully elucidated.
  • Hydrogen-bonding arrays are well-established modules for the formation of biotic and abiotic supramolecular polymers, as well as for the assembly of cylindrical and spherical capsules.[29, 30, 31-36] While a number of planar quadruple hydrogen-bonding motifs give rise to supramolecular arrays, cyclic peptides are amongst the few well-known examples of multiple hydrogen-bonding ring motifs that lead to the formation of supramolecular nanotubes.[37-43] Also, despite the remarkable progress that has been made in recent years, interactions involving hydrogen-bonding motifs have been restricted for the most part to the use of [O—H . . . O] and [N—H . . . O] noncovalent bonds because of their greater strengths and propensities to act cooperatively. [29, 30, 41, 44-49] These strong noncovalent bonds facilitate the construction of well-defined supramolecular assemblies by over-riding the influence of other competing interactions from mismatched molecular structures, counter ions and solvents. Permutations of hydrogen bonds composed of multiple intermolecular cooperative [C—H . . . O] interactions, leading to the formation of supramolecular assemblies, have remained largely out of reach on account of the relative weakness of single [C—H . . . O] interactions.[49]
  • There are a number of applications for the supramolecular assemblies. For example, supramolecular assemblies may be used to prepare batteries, organic semiconductors, including but not limited to organic field effect transistors, organic light emitting diodes, and photovoltaic devices, membranes, fibrous networks, or gas sensors. As a result, there is a need for new supramolecular assemblies.
  • SUMMARY OF THE INVENTION
  • One aspect of the invention is a supramolecular assembly, the supramolecular assembly comprising a racemic mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds. The mixture may be a racemic mixture of a first rigid macrocycle enantiomer and a second rigid macrocycle enantiomer. In some embodiments, the mixture of rigid macrocycles comprises a first rigid triangular macrocycle enantiomer and a second rigid triangular macrocycle enantiomer. In some embodiments, the first rigid macrocycle enantiomer is a rigid napthalenediimide-based macrocycle enantiomer or a derivative thereof and the second rigid macrocycle enantiomer is a rigid napthalenediimide-based macrocycle enantiomer or a derivative thereof. In particular embodiments, the first rigid napthalenediimide-based macrocycle enantiomer is the compound of:
  • Figure US20190016738A1-20190117-C00001
  • or a derivative thereof and the second rigid napthalenediimide-based macrocycle enantiomer is a compound of:
  • Figure US20190016738A1-20190117-C00002
  • or a derivative thereof. The first rigid macrocycle enantiomer may cooperatively interact with the second rigid macrocycle enantiomer through [C—H . . . O] hydrogen bonds. The first rigid macrocycle enantiomer and the second rigid macrocycle enantiomer may coaxially stack in an alternating fashion.
  • In some embodiments, the supramolecular assemblies may be a gel or precipitate. The supramolecular assemblies may have a fibrillar morphology or a needle morphology. The supramolecular assemblies may have a high-aspect ration. In particular embodiments, the supramolecular assembly has a first dimension of less than about 3 nm and a second dimension of greater than about 100 nm.
  • In another aspect of the invention is a method for preparing a supramolecular assembly, the method comprising providing a mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds, the mixture of rigid macrocycles comprising a first rigid macrocycle enantiomer and a second rigid macrocycle enantiomer, and providing a solvent. In some embodiments, the mixture of rigid macrocycles is an equimolar mixture of the first rigid macrocycle and the second rigid macrocycle. In some embodiments, providing the mixture of rigid macrocycles comprises mixing a first solution, the first solution comprising the first rigid macrocycle, and a second solution, the second solution comprising the second rigid macrocycle. In some embodiments, providing the mixture of rigid macrocycles comprises dissolving the first rigid macrocycle and/or the second rigid macrocycle. In some embodiments, the solvent is a halogenated alkane. In particular embodiments, the solvent comprises a member selected from the group consisting of CH2Cl2, CHCl3, ClCH2CH2Cl, ClCH2CH2Br, ClCH2CH2I, BrCH2CH2Br, and any combination thereof.
  • Another aspect of the invention is devices comprising the supramolecular assemblies described herein. In some embodiments, the device is a battery. In particular embodiments, the batter is a lithium batter. In some embodiments, the device is an organic semiconductor device. In particular embodiments, the organic semiconductor device is a photvoltaic device, an organic field effect transistor, an organic light emitting diode. In some embodiments, the device is a membrane or a fibrous network. In some embodiments, the device is a gas sensor comprising a membrane comprised the supramolecular assemblies.
  • BRIEF DESCRIPTION OF THE DRAWINGS
  • Non-limiting embodiments of the present invention will be described by way of example with reference to the accompanying figures, which are schematic and are not intended to be drawn to scale. In the figures, each identical or nearly identical component illustrated is typically represented by a single numeral. For purposes of clarity, not every component is labeled in every figure, nor is every component of each embodiment of the invention shown where illustration is not necessary to allow those of ordinary skill in the art to understand the invention.
  • FIG. 1A. shows structural formulae of R-Δ and S-Δ, followed by photographs of the formation of thermoreversible gels from the racemate rac-Δ by mixing R-Δ and S-Δ in ClCH2CH2Cl at a 1:1 molar ratio in concentrations of 0.4 wt %.
  • FIG. 1B shows a circular dichroism spectra of R-Δ and S-Δ in addition to the redissolved racemate rac-A, which is obtained by centrifugation of the gel, in ClCH2CH2Cl.
  • FIG. 2A shows interwoven fibrillar network from the gel of rac-Δ in ClCH2CH2Cl,
  • FIG. 2B shows discrete needles from a precipitate of rac-Δ in BrCH2CH2Br.
  • FIG. 2C shows random-shaped aggregates from a precipitate of rac-Δ in CHCl3.
  • FIG. 2D shows powder X-ray diffraction patterns for the vacuum-evacuated gel of rac-Δ in ClCH2CH2Cl (top) and the precipitate of rac-Δ in BrCH2CH2Br (bottom).
  • FIG. 3 shows a frequency sweep (0.02% strain) rheological measurements for the organogel of 1.0 wt % rac-Δ in ClCH2CH2Cl at 25° C. G′=storage modulus; G″=loss modulus.
  • FIG. 4A shows height sensor images of a sample of rac-Δ in ClCH2CH2Cl spin-coated on mica, in addition to the corresponding cross-sectional analysis of the nanofibers. The lines labelled (i) and (ii) in the height images correspond to the respective profile plots.
  • FIG. 4B shows height sensor images of a sample of rac-Δ in BrCH2CH2Br spin-coated on mica, in addition to the corresponding cross-sectional analysis of the nanofibers. The lines labelled (i) and (ii) in the height images correspond to the respective profile plots. The circle in highlights the profile of parallel aggregated nanofibers.
  • FIG. 4C shows a space-filling overlying a tubular representation of the top view of the columnar stacked dimer of R-Δ and S-Δ with a 60° rotational angle between them and an outer diameter of 2.2 nm.
  • FIG. 5A presents results of DFT calculations for a side-on and top view of stick models showing the relative orientations of R-Δ and S-Δ in the optimized superstructures of the (RS)-dimer.
  • FIG. 5B presents results of DFT calculations for a side-on and top view of stick models showing the relative orientations of R-Δ and S-Δ in the optimized superstructures of the (RR)-dimer (b). Hydrogen atoms on achiral carbon atoms of 1,2-cyclohexano rings are omitted for the sake of clarity.
  • FIG. 5C shows schematic views of the [C—H . . . O] interactions (hatched lines) between two NDI-Δ macrocycles of the (RS)-dimer, as well as the relative positions of the diastereotopic NDI protons Ha (cis,) and Hb (trans) to the adjacent protons on the stereogenic center of the 1,2-cyclohexano rings. [Ca—Ha . . . O] and [Cb—Hb . . . O] hydrogen bonds are depicted as hatched lines. A and D indicate hydrogen bonding acceptors and donors, respectively.
  • FIG. 5D shows schematic views of the [C—H . . . O] interactions (hatched lines) between two NDI-Δ macrocycles of the (RR)-dimer, as well as the relative positions of the diastereotopic NDI protons Ha (cis,) and Hb (trans) to the adjacent protons on the stereogenic center of the 1,2-cyclohexano rings. [Ca—Ha . . . O] and [Cb—Hb . . . O] hydrogen bonds are depicted as hatched lines. A and D indicate hydrogen bonding acceptors and donors, respectively. Crosses indicate non-existent [C—H . . . O] hydrogen bonds on account that dC . . . O>3.5 Å.
  • FIG. 5E shows an analysis of dC . . . O of [C—H . . . O] interactions between two NDI-Δ macrocycles of the (RS)-dimer.
  • FIG. 5F shows an analysis of dC . . . O of [C—H . . . O] interactions between two NDI-Δ macrocycles of the (RR)-dimer.
  • FIG. 6A shows variable temperature 1H NMR analyses of rac-Δ in ClCD2CD2Cl. Partial 1H NMR spectra of rac-Δ recorded at the same concentration of 0.6 g/L from −30 to +80° C. The relative positions of the diastereotopic NDI protons Ha and Hb to the adjacent protons on the stereogenic center of the 1,2-cyclohexano moieties are assigned in FIGS. 5C and 5D.
  • FIG. 6B shows variable temperature 1H NMR analyses of R-Δ in ClCD2CD2Cl. Partial 1H NMR spectra of R-recorded at the same concentration of 0.6 g/L from −30 to +80° C. The relative positions of the diastereotopic NDI protons Ha and Hb to the adjacent protons on the stereogenic center of the 1,2-cyclohexano moieties are assigned in FIGS. 5C and 5D.
  • FIG. 7A shows variable temperature 1H NMR analyses of rac-Δ in BrCD2CD2Br. Partial 1H NMR spectra of rac-Δ recorded at the same concentration of 0.6 g/L from +10 to +110° C. The relative positions of the diastereotopic NDI protons Ha and Hb to the adjacent protons on the stereogenic center of the 1,2-cyclohexano moieties are assigned in FIGS. 5C and 5D.
  • FIG. 7B shows variable temperature 1H NMR analyses of R-Δ in BrCD2CD2Br. Partial 1H NMR spectra of R-Δ recorded at the same concentration of 0.6 g/L from +10 to +110° C. The relative positions of the diastereotopic NDI protons Ha and Hb to the adjacent protons on the stereogenic center of the 1,2-cyclohexano moieties are assigned in FIGS. 5C and 5D.
  • FIG. 8A shows variable temperature 1H NMR analyses of rac-Δ in CDCl3. Partial 1H NMR spectra of rac-Δ recorded at the same concentration of 0.6 g/L from −30 to +60° C. The relative positions of the diastereotopic NDI protons Ha and Hb to the adjacent protons on the stereogenic center of the 1,2-cyclohexano moieties are assigned in FIGS. 5C and 5D.
  • FIG. 8B shows variable temperature 1H NMR analyses of R-Δ in CDCl3. Partial 1H NMR spectra of R-Δ recorded at the same concentration of 0.6 g/L from −30 to +60° C. The relative positions of the diastereotopic NDI protons Ha and Hb to the adjacent protons on the stereogenic center of the 1,2-cyclohexano moieties are assigned in FIGS. 5C and 5D.
  • DETAILED DESCRIPTION
  • Disclosed herein are supramolecular assemblies that spontaneously form through the cooperative [C—H . . . O] hydrogen bonds. Although supramolecular assemblies have been previously described that exploit strong hydrogen bond, e.g., [O—H . . . O] or [N—H . . . O], it is surprising that the week [C—H . . . O] hydrogen bond can drive supramolecular assembly. Moreover, the supramolecular assemblies described herein spontaneously form from a mixture of enantiomers.
  • An aspect of the invention is a supramolecular assembly. The supramolecular assembly comprises a mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds. Rigid macrocycles are cyclic macromolecules or a macromolecular cyclic portion of a molecule that is constrained against large-amplitude conformational rearrangement around the cyclic portion of the molecule. Rigid macrocycles may be composed of one or more subunits arranged in a cyclic manor. In certain embodiments, the rigid macrocycle is composed of two or more subunits. In particular embodiments, the rigid macrocycle is composed of two alternating subunits.
  • The rigid macrocycles may be rigid, triangular naphthalenediimide-based macrocycles. Examples of rigid, triangular naphthalenediimide-based macrocycles macrocycles are provided in Formulas (I) and (II).
  • Figure US20190016738A1-20190117-C00003
  • The compounds of Formulas (I) and (II) each comprise an alternating cyclic arrangement of naphthalenediimide moieties and cycloalkane moieties. The compound of Formula (I) is sometimes referred to as (RRRRRR)-NDI-Δ, R-Δ, or (−)-NDI-Δ. The compound of Formula (II) is sometimes referred to as (SSSSS)-NDI-Δ, S-Δ, or (+)-NDI-Δ.
  • The rigid macrocycles may also be derivatives of R-Δ and S-Δ. Derivatives of R-Δ and S-Δ may include cyclohexane moieties where one or more hydrogen atoms at any of positions 1-6 of the cyclohexane moiety are substituted. Substituents may include hydrocarbon moieties, halogen moieties, oxygen-containing moieties, nitrogen-containing moieties, sulfur containing moieties, or combinations thereof. In certain embodiments, substituents may be C1-6 alkyl moieties, C1-6 alkenyl moieties, C1-6 alkynyl moieties, phenyl moieties, halo moieties, C0-6 hydroxyl moieties, C1-6 ether moieties, C1-6 carbonyl moieties, C1-6 aldehyde moieties, C1-6 carboxyl moieties, C1-6 ester moieties, or combinations thereof.
  • Derivatives of R-Δ and S-Δ may include C3-5 cycloalkane moieties or C7-8 cycloalkane moieties that also have (RR) or (SS) distereoisomer centers in replace of the cyclohexane moieties. Derivatives of this type also includes substituted C3-5 cycloalkane moieties or C7-8 cycloalkane moieties where one or more hydrogen atoms at any position are substituted. Substituents may include hydrocarbon moieties, halogen moieties, oxygen-containing moieties, nitrogen-containing moieties, sulfur containing moieties, or combinations thereof. In certain embodiments, substituents may be C1-6 alkyl moieties, C1-6 alkenyl moieties, C1-6 alkynyl moieties, phenyl moieties, halo moieties, C0-6 hydroxyl moieties, C1-6 ether moieties, C1-6 carbonyl moieties, C1-6 aldehye moieties, C1-6 carboxyl moieties, C1-6 ester moieties, or combinations thereof.
  • Derivatives of R-Δ and S-Δ may include moieties that are not cycloalkanes that also have (RR) or (SS) distereoisomer centers in replace of the cyclohexane moieties.
  • The naphthalenediimide-based triangular compounds R-Δ and S-Δ may be synthesized and scaled using the protocol outlined in Angew. Chem. Int. Ed. 2013, 52, 13100-13104 or U.S. Pat. Pub. No. 2016/0276669; herein incorporated by reference in their entirety. Briefly, each of R-Δ and S-Δ may be prepared from a single-step condensation of the appropriate (RR)- or (SS)-trans-1,2-diaminocyclohexane with naphthalenetetracarboxylic dianhydride. Derivatives of each of R-Δ and S-Δ may also be prepared from the substituted (RR)- or (SS)-trans-1,2-diaminocyclohexane with naphthalenetetracarboxylic dianhydride. Derivatives of each of R-Δ and S-Δ may also be prepared from (RR)- or (SS)-trans-1,2-diaminocyclopentane or substituted (RR)- or (SS)-trans-1,2-diaminocyclopentane with naphthalenetetracarboxylic dianhydride.
  • The supramolecular assemblies may comprise a mixture of enantiomers. In certain embodiments, the mixture may comprise a mole ratio of between 60:40 to 40:60 of a first enantiomer to a second enantiomer, including any mole ratio in between. Particular embodiments, are comprised of racemic mixtures having an equimolar ratio of the first enantiomer to the second enantiomer. The first enantiomer and the second enantiomer may be rigid, triangular macrocycle enantiomers. In particular embodiments, the rigid, triangular macrocycle enantiomers are R-Δ or a derivative thereof and S-Δ or a derivative thereof.
  • In certain embodiments, the supramolecular assembly is a gel. In other embodiments, the supramolecular assembly is a precipitate.
  • In certain embodiments, the supramolecular assembly has a fibrillar morphology or a needle morphology. In certain embodiments, the supramolecular assembly has a high-aspect ratio. In certain embodiments, the supramolecular assembly has a first dimension of less than about 3 nm and a second dimension of greater than about 100 nm.
  • Another aspect of the invention is a method for preparing supramolecular assemblies. The method for preparing a supramolecular assembly comprises providing a mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds, the mixture of rigid macrocycles comprising a first rigid macrocycle enantiomer and a second rigid macrocycle enantiomer, and providing a solvent. In certain embodiments, the mixture of rigid macrocycles is an equimolar mixture of the first rigid macrocycle and the second rigid macrocycle. In some embodiments, providing the mixture of rigid macrocycles comprises mixing a first solution, the first solution comprising the first rigid macrocycle, and a second solution, the second solution comprising the second rigid macrocycle. In other embodiments, providing the mixture of rigid macrocycles comprises dissolving the first rigid macrocycle and/or the second rigid macrocycle.
  • The solvent to be used in the method solvent may be a halogenated alkane. In certain embodiments, the solvent comprises a member selected from the group consisting of CH2Cl2, CHCl3, ClCH2CH2Cl, ClCH2CH2Br, ClCH2CH2I, BrCH2CH2Br, and any combination thereof.
  • There are a number of applications for the supramolecular assemblies provided herein. Batteries may be prepared with the supramolecular assemblies described herein. In some embodiments, the supramolecular assemblies may be used to prepare cathode materials for batteries or cathode components of the batteries. In particular embodiments, the batteries are lithium batteries. Use of rigid, macrocyclic compounds for use in the preparation of batteries, battery materials, or battery components are described U.S. Pat. Pub. No. 2016/027669, incorporated herein by reference in its entirety.
  • Organic semiconductor devices may be prepared with the supramolecular assemblies described herein. For example, the organic semiconductor device may be a photovoltaic device, an organic field effect transistor (OFETs), or an organic light emitting diodes (OLEDs). The supramolecular assembly may be used as an organic semiconductor in the preparation of an OFET. The supramolecular assembled used as an organic semiconductor will be in contact with an OFET source, an OFET drain, and a dialectric material, and the OFET will further comprise a gate to control the electrical flow in the OFET.
  • Moreover, membranes and fibrous networks may also be prepared with the supramolecular assemblies described herein. These membranes and fibrous networks may be used to prepare gas sensors, particularly for a reductive gas. Examples of reductive gases include, but are not limited to gaseous amines such as NH3 and NH2NH2. Membranes or fibrous networks may be prepared by applying the supramolecular assemblies to a surface, drying the supramolecular assemblies, and connecting the dried membrane or fibrous network to electrodes and a sensor. When a reductive gas contacts the membrane or fibrous network, a detectable electrical signal will allow for the determination of the presence of the reductive gas.
  • Gelation and Precipitation of rac-Δ.
  • Herein, we report an example of circular [C—H . . . O] interaction-driven supramolecular gelation and precipitation that occurs (FIG. 1A) upon mixing equimolar amounts of the enantiomeric naphthalenediimide-based rigid triangular macrocycles (NDI-Δ)—namely, R-Δ and S-Δ. It relies on the formation of one-dimensional (1D) fibers brought about by the coaxial stacking assembly of R-Δ and S-Δ in an alternating fashion, driven predominantly by rings of multiple weak [C—H . . . O] interactions acting cooperatively at the interfaces between R-Δ and S-Δ. DFT Calculations reveal that the energetically more favorable stereochemical match between R-Δ and S-Δ allows them to act as two complementary double-faced 12-point [C—H . . . O] hydrogen-bonded circular arrays with an unprecedented and uninterrupted ADDAADDAADDA•DAADDAADDAAD hydrogen-bonding sequence. As a consequence, this strategy reinforces the strength and facilitates the cooperativity and linear directionality of 12 circular [C—H . . . O] interactions between R-Δ and S-Δ so as to drive the 1D supramolecular assembly of the racemate rac-Δ of R-Δ and S-Δ to form organogels.
  • Recently, we have demonstrated that both R-Δ and S-Δ exhibit solvent-dependent crystallization in common halogenated solvents.[51, 52] In the cases of CH2Cl2 and CHCl3, R-Δ and S-Δ crystallize as non-tubular superstructures.[51] In the cases of 1,2-dihaloethanes (DXEs), however, R-Δ and S-Δ form two types of tubular superstructures—(i) single-handed helical tetrameric nanotubes in ClCH2CH2Cl (DCE) and (ii) infinite non-helical nanotubes in ClCH2CH2Br (CBE), ClCH2CH2I (CIE), and BrCH2CH2Br (DBE)—as a result of the columnar stacking of NDI-Δ with a 60° rotational angle driven by means of multiple weak [C—H . . . O] interactions acting cooperatively, in conjugation with directed halogen (X) bonding interactions along the [X . . . X]-bonded DXE chains inside the nanotubes.[52] The constitutions of the coaxially aligned DXEs play a role in templating the self-assembly of NDI-Δ into tubular superstructures.
  • In an attempt to explore the role of these solvents in the assembly of the racemate rac-Δ of R-Δ and S-Δ, we discovered serendipitously that, upon mixing together equimolar solutions of R-Δ and S-Δ in DCE, a self-supporting gel is formed (FIG. 1A) within minutes. It should be emphasized that, despite the fact that the solubilities of enantiopure R-Δ and S-Δ are at least as high as 20 g/L in DCE, mixing two equimolar solutions (5 g/L, 0.4 wt %) of R-Δ and S-Δ in DCE results, nonetheless, in the gelation of the mixture as evidenced by a homogeneous solid-like material that exhibits no gravitational flow whatsoever. Upon heating, the gel (0.4 wt %) transforms into a clear solution with a melting temperature of 69-73° C. which resorts on cooling to forming a gel, confirming its thermoreversibility. In addition, this gel has also been made by dissolving a racemate of solid R-Δ and S-Δ in DCE directly by heating, followed by cooling the mixture to ambient temperature. In contrast to the strong mirror-symmetrical circular dichroism (CD) responses of enantiopure R-Δ and S-Δ, the silent CD signal of a redissolved sample prepared from the centrifuged gel confirms (FIG. 1B) its racemic nature.
  • In view of the unexpected gelation of the racemate rac-Δ in DCE, the gelation abilities of rac-Δ in another five halogenated solvents were also assessed (Table 1). Enantiopure R-Δ and S-Δ are soluble in all of these solvents at the same concentration of 0.4 wt % under similar conditions. In striking contrast, upon mixing both equal volumes of 0.4 wt % solutions of R-Δ and S-Δ in these solvents, three different types of phenomena were observed—(i) self-supporting thermoreversible organogel which formed in DCE, (ii) white fibrous precipitates which appeared in CBE, CIE, and DBE within 10 min, and (iii) white flocculent precipitates which emerged after about 10 min in CH2Cl2 and CHCl3. The morphologies of these different aggregated states of rac-Δ were probed by scanning electron microscopy (SEM).
  • TABLE 1
    Solvent-Dependent Gelation Behavior of R-Δ and
    S-Δ as well as Their Racemate rac-Δ
    Solvent R-Δ or S-Δ rac-Δ
    CH2Cl2 S P
    CHCl3 S P
    ClCH2CH2Cl S G
    ClCH2CH2Br S P
    ClCH2CH2I S P
    BrCH2CH2Br S P
    All experiments were carried out at the same concentration of 0.4 wt %. S, Solution; G, Gel; P, Precipitate.
  • SEM Analysis of rac-Δ in DCE revealed (FIG. 2A) that the organogel is formed by an interwoven fibrillar network, composed of high-aspect ratio flexible fibers with lengths on the order of several hundred micrometers and diameters on the order of several hundred nanometers. The precipitate of rac-Δ in DBE has been characterized (FIG. 2B) as forming high-aspect ratio, but more rigid, as well as thicker and straight needles, which exercise their ability to generate an entangled network. This observation indicates that both the gel and the precipitate of rac-Δ in DCE and DBE, respectively, are generated by means of a similar mechanism involving the formation of high-aspect ratio 1D fibers as a result of cooperative action of the [X . . . X]-bonded DXE chains inside the NDI-Δ supramolecular nanotubes.[52] Good cooperation between the weaker [Cl . . . Cl] interactions and the shorter length of DCE (4.33 Å), compared with the stronger [Cl . . . Br], [Cl . . . I], and [Br . . . Br] interactions as well as the longer lengths exhibited in CBE (4.48 Å), CIE (4.68 Å), and DBE (4.62 Å), give rise to a more dense network of fibers which facilitates the gelation of rac-Δ in DCE involving the formation of the entangled fibrous network.[52] By contrast, SEM images of the flocks of rac-Δ in CHCl3 show (FIG. 2C) random-shaped aggregates with variable diameters in size, suggesting that rac-Δ might be unable to aggregate unidirectionally, forming 1D fibers over a long range on account of the lack of the templating effect of the shorter constitution associated with CHCl3.[52] The 1D fibers formed from rac-Δ in DCE and DBE were also investigated by powder X-ray diffraction (PXRD). Both PXRD patterns (FIG. 2D) for the vacuum-evacuated gel of rac-Δ in DCE and precipitate of rac-Δ in DBE resemble one another closely. The sharper diffraction peaks observed for the precipitate of rac-Δ in DBE are in line with the better rigidity and crystallinity of the 1D fibers formed from rac-Δ in DBE than that in DCE. These observations, in combination with our previous conclusion52 that 1D supramolecular nanotubes form only from R-Δ or S-Δ in DXEs, (i) confirm the similar packing motifs of the 1D high-aspect ratio fibers, formed from rac-Δ in DCE and DBE and (ii) provide strong evidence for the same assembly mechanism of 1D fibers through columnar stacking of rac-Δ with the assistance of the templating effect of the [X . . . X]-bonded DXE chains.
  • Oscillatory rheology which was carried out in order to characterize the mechanical properties of the organogel (1.0 wt % rac-Δ in DCE), revealed (FIG. 2) that the storage modulus G′ is 20 kPa which is greater than the corresponding loss modulus G″ of 4 kPa. It is worth noting that the example of such a fully rigid macrocycle acting as a gelator at a concentration as low as 0.4 wt % without any additives except for the solvent is unprecedented to the best of our knowledge. In contrast, rac-Δ in CBE, CIE, and DBE produce more rigid high-aspect ratio fibers which are unable to form self-supporting gels through entangling to afford networks, leading to precipitation.
  • Atomic Force Microscopy (AFM) Analyses.
  • In order to gain insight into the initial assembly mechanism of the high-aspect ratio fibers of rac-Δ in DCE and DBE, AFM was performed on them. Two samples were prepared by spin-coating both dilute clear solutions (0.5 g/L) of rac-Δ in DCE and DBE onto mica surfaces. The sample of rac-Δ in DCE reveals (FIG. 4A) discrete thin micrometer-long nanofibers with diameters of ca. 10 nm, which we believe are composed of a bundle of 2.2 nm-in-diameter supramolecular nanotubes formed (FIG. 4C) from the columnar stacking of alternate R-Δ and S-Δ with a 60° rotational angle. The AFM image of the sample of rac-Δ in DBE shows (FIG. 4B) high-aspect ratio nanotubes with lengths on the order of several micrometers. Cross-section analysis indicates unambiguously that these nanotubes have a height of 2.4±0.4 nm—a dimension which corresponds well with the outer diameter of 2.2 nm of the proposed R-Δ and S-Δ stacking in an alternating fashion to form (FIG. 4C) supramolecular nanotubes. This level of consistency confirms the fact that rac-Δ assembles into single supramolecular nanotubes with aspect ratios as high as 1000 or more as a result of the columnar stacking of rac-Δ in which R-Δ and S-Δ are positioned in a 60°-rotationally alternating manner. In addition, several single-molecule-scale nanotubes aggregate in parallel at long range, suggesting that the high-aspect ratio fibers observed in the SEM sample of rac-A in DBE could be assembled from a bundle of supramolecular nanotubes with diameters of 2.2 nm. Considering the closely similar PXRD patterns (FIG. 2D) of the gel of rac-Δ in DCE and the precipitate of rac-Δ in DBE, the formation of thicker nanofibers in the case of rac-Δ in DCE compares with that in DBE. The nanofibers are believed to originate from the parallel packing of single-molecule-scale supramolecular nanotubes as a consequence of the rapid volatilization of low-boiling DCE during the spin-coating process. The observation of high-aspect ratio supramolecular nanotubes with diameters on the single-molecule scale also indicates that the axial noncovalent bonding interactions—namely, [C—H . . . O] and [X . . . X] between DXE molecules inside the nanotubes—play a defining role in directing and driving the highly efficient formation of these 1D assemblies.
  • Density Functional Theory (DFT) Calculations.
  • In an attempt to understand why the racemate rac-Δ forms gels and precipitates while the pure enantiomers R-Δ and S-Δ do not, we investigated these systems by quantum chemical calculations (Q-Chem 4.2.0/PBE/6-311G**). We do not intend to be bound by theory, but believe that these numerical experiments are useful for those of skill in the art to more fully understand the present technology. As models, we studied two representative systems—that is, a racemic (RS)-dimer and an enantiopure (RR)-dimer composed (FIGS. 5A and 5B) of columnarly stacked R-Δ and S-Δ or two R-Δs, respectively. DFT optimization results revealed that the (RS)-dimer has a binding energy (ΔG) of −34.5 kcal mol−1, whereas the (RR)-dimer has a ΔG value of −32.7 kcal mol−1. It follows that the (RS)-dimer is 1.8 kcal mol−1 more stable than the (RR)-dimer on the basis of the same energies considered for R-Δ and S-Δ, an observation which suggests that the aggregates of rac-Δ should be thermodynamically more stable than those of the either R-Δ or S-Δ, and thus is in good agreement with the experimental results observed (FIG. 2) for the formation of the aggregates of rac-Δ while R-Δ remains in solution. The binding energy difference of 1.8 kcal mol−1 equates well with the modest melting temperature (69-73° C.) of the gel. Geometrical analysis revealed (FIGS. 5A and 5B) that (i) the two NDI-Δs in the (RS)-dimer are 0.04 Å closer than in the (RR)-dimer, and (ii) the rotational angle between two NDI-Δs in the (RS)-dimer is 60°, giving rise to the C3 symmetry of the (RS)-dimer, whereas the angle in the (RR)-dimer is 65° with a 5° deviation from C3 symmetry. These observations suggest two possibilities—(i) the [C—H . . . O] hydrogen bonding interactions between R-Δ and S-Δ are stronger than those between two R-Δs; and (ii) the columnar stacking of the (RS)-dimer leads to non-helical supramolecular nanotubes, while that of the (RR)-dimer results in helical ones as shown previously.[52] The [C—H . . . O] hydrogen bonding patterns of both dimers are depicted in FIGS. 5C and 5D wherein the diastereotopic NDI protons are designated as Ha and Hb, the corresponding C atoms of which are referred as Ca and Cb. Analysis of [C—H . . . O] interaction distances dC . . . O reveals (FIGS. 5E and 5F, Table 3) that in both dimers, all dCb . . . O are much greater than all dCa . . . O. All dCa . . . O in both dimers are very close with a mean dCa . . . O of 3.15 Å (mean ∠Ca—Ha . . . O of 152.1°) for the (RS)-dimer and one of 3.13 Å (mean ∠Ca—Ha . . . O of) 161° for the (RR)-dimer, respectively, suggesting that all the Ha atoms form strong [Ca—Ha . . . O] hydrogen bonds with imide O atoms. By contrast, mean dCb . . . O of 3.45 Å (mean ∠Cb—Hb . . . O of 161.8°) in the (RS)-dimer is 0.1 Å, shorter than the one of 3.55 Å (mean ∠Cb—Hb . . . O of 152.3°) in the (RR)-dimer—an all but negligible value to be considered as a [C—H . . . O] interaction,[53] indicating that there are modest [Cb—Hb . . . O] interactions in the (RS)-dimer, whereas [Cb—Hb . . . O] interactions in the (RR)-dimer are nonexistent. In the case of the (RS)-dimer, [Ca—Ha . . . O] and [Cb—Hb . . . O] hydrogen bonds are alternatingly arranged (FIG. 5E) in a triangular wave with an unprecedented and uninterrupted complementary 12-point ADDAADDAADDA•DAADDAADDAAD hydrogen-bonding sequence. While in the case of the (RR)-dimer, [Ca—Ha . . . O] and [Cb—Hb . . . O] hydrogen bonds are doubly alternatingly arranged (FIG. 5F) in a square-wave manner with a complementary six-point ADADAD•DADADA hydrogen bonding sequence on account of the weakness of the [Cb—Hb . . . O] hydrogen bonds. The stronger [Cb—Hb . . . O] hydrogen bonds—which are in good agreement with the shorter distance between two NDI-Δs and lower energy of the (RS)-dimer—in cooperation with the more even arrangement of alternating strong and weak hydrogen bonds, endow rac-Δ with a stronger ability to aggregate giving fibers, whereas neither R-Δ nor S-Δ can form similar aggregates under the same conditions on account of the less stable noncovalent bonding interactions, resulting from the inferior stereochemical match between of two R-Δs or S-Δs. These observations, taken together, suggest that the energetically more favorable match between R-Δ and S-Δ allows them to act as two unique double-faced 12-point [C—H . . . O] hydrogen-bonded rings which are able to enhance the cooperativity and directionality of the hydrogen bonds, resulting in the 1D supramolecular assembly of rac-Δ. [54, 55] Although strong [O—H . . . O],[44, 45] [N—H . . . O],[29, 30, 41, 46-49] π-π stacking,[47, 56-59] and ion-pairing[60, 61] interactions, as well as weak halogen bonding[62] and [C—H . . . π][63] interactions have been employed oftentimes in supramolecular polymerizations, related examples facilitated predominantly by multiple weak [C—H . . . O] interactions[64, 65] acting circularly and cooperatively have not, to the best of our knowledge, been explored.
  • 1H and 2D DOSY NMR Analyses.
  • In order to probe the possible influence of different strengths of [C—H . . . O] interactions between R-Δ and S-Δ as well as enantiopure R-Δ on the chemical shifts of the diastereotopic NDI protons Ha and Hb, variable-temperature (VT) 1H NMR spectroscopy was carried out. All VT 1H NMR spectra of rac-Δ and R-Δ carried out in ClCD2CD2Cl (−30 to +80° C., FIGS. 6A and 6B), BrCD2CD2Br (+10 to +110° C., FIGS. 7A and 7B), and CDCl3 (−30 to +60° C., FIGS. 8A and 8B) at the same concentration show similar trends with no significant differences between the changes in chemical shifts of Ha and Hb of both rac-Δ and R-Δ, an observation which indicates that the weak nature of [C—H . . . O] interactions might not be enough to lead to the 1H NMR-detectable difference of chemical environments between rac-Δ and R-Δ, even if the [C—H . . . O] interactions between R-Δ and S-Δ are stronger than those between two R-Δs as supported by DFT calculations. DOSY NMR experiments were performed to investigate the aggregation behaviors of rac-Δ and R-Δ in the solution phase. DOSY NMR spectra of both rac-Δ and R-Δ in ClCD2CD2Cl, BrCD2CD2Br, and CDCl3, analyzed under the same conditions, gave very similar diffusion coefficients (D) (Table 2). For example, although flocks already appeared in solutions of rac-Δ, those of R-Δ are still clear at −30° C. with the concentration of 0.6 g/L in ClCD2CD2Cl, D of rac-Δ and R-Δ are measured to be 0.82×10−10 and 0.84×10−10 m2 s−1, respectively. These observations suggest that the gelation and precipitation of rac-Δ, rather than enantiopure R-Δ or S-Δ, might be the result of a cooperative mechanism facilitated by the subtle interplay between [C—H . . . O] interactions and better matched steric configurations of R-Δ and S-Δ, which is not detectable on the 1H NMR timescale by DOSY experiments presumably because of the rapid dynamic exchange of species in solution phase.
  • TABLE 2
    DOSY NMR determined diffusion coefficients (D) for R-Δ and rac-
    Δ in different solvents and at different temperatures
    R-Δ rac-Δ R-Δ rac-Δ R-Δ rac-Δ
    Solvent CDCl3
    Temp. (° C.) −30 −30 10 10 80 80
    D (10−10 m2 s−1) 0.84 0.82 2.14 2.18 6.52 6.60
    Solvent BrCD2CD2Br
    Temp. (° C.) 10 10 20 20 80 80
    D (10−10 m2 s−1) 1.05 1.03 1.25 1.24 3.25 3.25
    Solvent CDCl3
    Temp. (° C.) −30 −30 20 20
    D (10−10 m2 s−1) 2.12 2.12 7.14 7.14
  • In summary, we have demonstrated that equimolar mixing of R-Δ and S-Δ leads to the assembly of the racemate rac-Δ into a supramolecular organogel composed of entangled fibrillar networks in DCE, whereas neither of the enantiopure R-Δ nor S-Δ form fibrous aggregates under identical conditions. These organogels are comprised of fibers, produced by the columnar stacking of alternate R-Δ and S-Δ and driven synergistically by rings of 12 weak [C—H . . . O] hydrogen bonds in a circular manner, assisted by a good match between the R-Δ and S-Δ enantiomers. DFT calculations testify to the fact that the (RS)-dimer is 1.8 kcal mol−1 more stable than the (RR)-dimer and that the [C—H . . . O] interactions between R-Δ and S-Δ are much stronger and more highly cooperative than those between two R-Δs or S-Δs. These experimental results, in conjunction with DFT calculations, provide and account for this example of supramolecular gelation from rigid racemic gelators, rather than their enantiopure counterparts, an observation which highlights the fundamental relationship between stereochemistry and gelation. The use of the multiple weak [C—H . . . O] interactions acting cooperatively in rings to provide the major driving force represents a promising design strategy for LMWGs which relies on the subtle interplay between stereochemistry and weak noncovalent bonding interactions, expanding the scope of LMWGs to rigid racemates in the absence of strong hydrogen-bonded motifs and flexible structures. In view of the fact that many organic compounds contain (C—)H atoms and C═O groups (or O atoms) that can play the roles of hydrogen bond donors and acceptors, respectively, means that intramolecular arrays with intermolecular stereoelectronic matches of multiple [C—H . . . O] interactions can, in principle, act cooperatively in a supramolecular context to produce a wide variety of new soft materials.
  • Miscellaneous
  • All methods described herein can be performed in any suitable order unless otherwise indicated herein or otherwise clearly contradicted by context. The use of any and all examples, or exemplary language (e.g., “such as”) provided herein, is intended merely to better illuminate the invention and does not pose a limitation on the scope of the invention unless otherwise claimed. No language in the specification should be construed as indicating any non-claimed element as essential to the practice of the invention.
  • Preferred aspects of this invention are described herein, including the best mode known to the inventors for carrying out the invention. Variations of those preferred aspects may become apparent to those of ordinary skill in the art upon reading the foregoing description. The inventors expect a person having ordinary skill in the art to employ such variations as appropriate, and the inventors intend for the invention to be practiced otherwise than as specifically described herein. Accordingly, this invention includes all modifications and equivalents of the subject matter recited in the claims appended hereto as permitted by applicable law. Moreover, any combination of the above-described elements in all possible variations thereof is encompassed by the invention unless otherwise indicated herein or otherwise clearly contradicted by context.
  • EXAMPLES General
  • All reagents were purchased from Aldrich or TCI and used without further purification. The macrocyclic triangles R-Δ (Formula I) and S-Δ (Formula II) were synthesized as described previously.[51] Variable temperature 1H and 2D DOSY NMR spectra were recorded on a BrukerAvance 500 spectrometer, with a working frequency of 500 MHz for 1H. Chemical shifts are reported in ppm relative to the signals corresponding to the residual non-deuterated solvents (CDCl3: δ 7.26 ppm; ClCD2CD2Cl: δ 3.72 ppm; BrCD2CD2Br: δ 3.63 ppm). Circular dichroism (CD) measurements were carried out on a Jasco J-815 spectrometer and the HT voltage was maintained below 600 V.
  • Preparation and Characterization of Organogels and Precipitates
  • Gel and precipitate formations were carried out by mixing equal volumes of solutions of both R-Δ and S-Δ in vials at the same concentrations of 0.4 wt %. The gels can also be made by directly dissolving the racemate rac-Δ as a solid in ClCH2CH2Cl (DCE) by heating, followed by cooling the mixture to ambient temperature. The melting point of the gel (0.4 wt %) was measured using an electrothermal IA9100 melting point apparatus. The scanning electron microscopy (SEM) samples were prepared by drop-casting as-synthesized aggregates onto silicon wafers, followed by drying in air. SEM Images were obtained using a Hitachi SU-8030 FE-SEM. Powder X-ray diffraction (PXRD) data were collected on a Rigaku ATXG X-ray diffractometer using Cu-Kα radiation (λ=1.54178 Å, 50 kV, 240 mA) at room temperature.
  • Rheological measurements were performed on a Paar Physica MCR-300 rheometer using a 25 mm diameter parallel plate with a 1.0 mm gap. The organogel samples were prepared by dissolving the racemate rac-Δ (1.0 wt %) directly as a solid in DCE by heating, followed by cooling the mixture to ambient temperature. Gel samples were loaded carefully onto the bottom plate. Frequency sweep experiments were conducted within the linear viscoelastic regime.
  • In order to obtain aggregates as small as possible for atomic force microscopy (AFM) characterization, the as-synthesized gel and precipitate (5 mg of rac-Δ in 1 mL of DCE or DBE) was diluted to a concentration of 0.5 g/L and spin-coated onto a mica surface at 5000 rpm and dried in air. AFM Imaging was performed immediately on a Dimension ICON, Bruker Corporation using the tapping mode. The cross sections and heights of individual fibers were analyzed employing built-in software.
  • Computational Details
  • Density functional theory (DFT) calculations for both model dimers and both R-Δ and S-Δ were carried out using Q-Chem,2 version number 4.2.0.[68] The Perdew-Burke-Ernzerhof3 (PBE) type of GGA exchange-correlation functional was applied for geometry optimizations with the 6-311G** basis set.[69] The van der Waals correction was taken into account using Grimme's empirical dispersion potential.[70] The geometries of individual R-Δ and S-Δ as well as both (RR)- and (RS)-dimers were optimized in the gas phase. The binding energies for holding (i) R-Δ and S-Δ molecules together to form the (RS)-dimer or (ii) two R-Δ molecules to form the (RR)-dimer were calculated (FIG. S3) using the energy differences between both (RR)-dimer and (RS)-dimer with their corresponding isolated monomeric triangles. The optimized coordinates of R-Δ and S-Δ as well as those for the (RS)- and (RR)-dimers are provided in Tables 4-7. Structural images of individual R-Δ and S-Δ as well as both (RR)- and (RS)-dimers were produced using UCSF Chimera 1.10. Atom-to-atom distances and angles were measured (Table 3) employing Mercury 3.6.
  • TABLE 3
    [C—H . . . O] Hydrogen Bonding Geometries of DFT
    Optimized Structures of the (RS)- and (RR)-Dimers.
    Dimer Noa [C—H . . . O] Interactiona dC—H/Å dH . . . O/Å dC . . . O/Å ∠C—H . . . O/°
    (RS)-dimer 1 [Ca—Ha . . . O] 1.092 2.1758 3.1719 150.47
    2 [Cb—Hb . . . O] 1.0937 2.3858 3.4518 164.4
    3 [Ca—Ha . . . O] 1.0925 2.1312 3.135 151.51
    4 [Cb—Hb . . . O] 1.0934 2.3634 3.4096 159.58
    5 [Ca—Ha . . . O] 1.0925 2.1268 3.1468 154.25
    6 [Cb—Hb . . . O] 1.0936 2.453 3.5073 161.5
    7 [Ca—Ha . . . O] 1.092 2.176 3.1728 150.57
    8 [Cb—Hb . . . O] 1.0937 2.3839 3.4504 164.56
    9 [Ca—Ha . . . O] 1.0925 2.1309 3.1363 151.75
    10 [Cb—Hb . . . O] 1.0934 2.3573 3.4027 159.45
    11 [Ca—Ha . . . O] 1.0924 2.1268 3.1449 153.93
    12 [Cb—Hb . . . O] 1.0936 2.4588 3.5118 161.2
    (RR)-dimer 1 [Cb—Hb . . . O] 1.0931 2.6062 3.6084 152.05
    2 [Cb—Hb . . . O] 1.0932 2.5655 3.5668 151.84
    3 [Ca—Ha . . . O] 1.093 2.0775 3.1371 162.5
    4 [Ca—Ha . . . O] 1.0928 2.0662 3.1228 161.73
    5 [Cb—Hb . . . O] 1.0932 2.4512 3.4561 152.21
    6 [Cb—Hb . . . O] 1.0935 2.5111 3.5261 153.89
    7 [Ca—Ha . . . O] 1.0926 2.0761 3.1239 159.68
    8 [Ca—Ha . . . O] 1.093 2.0933 3.1535 162.65
    9 [Cb—Hb . . . O] 1.0933 2.5605 3.565 152.31
    10 [Cb—Hb . . . O] 1.0931 2.5805 3.5784 151.35
    11 [Ca—Ha . . . O] 1.0926 2.0971 3.1404 158.72
    12 [Ca—Ha . . . O] 1.0928 2.0681 3.1212 160.88
    aThe numbers (No) and types of [C—H . . . O] interactions have been assigned in FIGS. 4c-f in the main text.
  • TABLE 4
    Optimized Coordinates of R-Δ Using PBE/6-311G**.
    Atom Number Atom Symbol x/Å y/Å z/Å
    1 O 5.39053 0.97407 −1.99443
    2 O −0.30164 5.09809 −2.58105
    3 O −0.59292 5.32502 2.00668
    4 O 4.89396 0.93472 2.586
    5 O −3.41264 4.10317 −2.05773
    6 O −4.39116 −2.86729 −2.51364
    7 O −4.27162 −3.18747 2.07517
    8 O −3.28059 3.77932 2.5385
    9 O −1.92972 −4.90524 −2.01996
    10 O 4.5123 −2.09152 −2.57218
    11 O 4.94954 −2.22093 2.01234
    12 O −1.57772 −4.82146 2.57359
    13 N 5.0774 0.81774 0.28439
    14 N −0.57638 5.08646 −0.28639
    15 N −3.2094 3.95536 0.2341
    16 N −4.16492 −3.07519 −0.22276
    17 N −1.83874 −4.74231 0.27758
    18 N 4.7029 −2.00725 −0.27004
    19 C 4.72954 1.27446 −1.0052
    20 C 3.5177 2.13219 −1.1094
    21 C 3.07008 2.54291 −2.36249
    22 H 3.62005 2.20363 −3.24262
    23 C 1.94009 3.37533 −2.47922
    24 H 1.57572 3.7036 −3.45477
    25 C 1.26234 3.81041 −1.34274
    26 C 0.08202 4.70462 −1.48633
    27 C −0.09362 4.81113 1.01071
    28 C 1.04925 3.86294 1.11167
    29 C 1.49752 3.45328 2.36486
    30 H 0.97373 3.82659 3.2472
    31 C 2.6051 2.5909 2.47964
    32 H 2.96894 2.2616 3.45504
    33 C 3.27539 2.14579 1.34248
    34 C 4.46309 1.2616 1.48694
    35 C 2.83532 2.54925 0.0587
    36 C 1.70187 3.40624 −0.05878
    37 C −1.78367 5.93497 −0.44187
    38 H −2.02657 5.87415 −1.50987
    39 C −1.51987 7.4071 −0.08855
    40 H −0.64911 7.75419 −0.6681
    41 H −1.27717 7.48902 0.98296
    42 C −2.76144 8.24859 −0.42267
    43 H −2.58067 9.30269 −0.1561
    44 H −2.93905 8.21474 −1.51294
    45 C −4.0032 7.71687 0.30812
    46 H −3.85806 7.82622 1.39835
    47 H −4.8923 8.30923 0.03731
    48 C −4.24358 6.23482 −0.01687
    49 H −4.45045 6.10581 −1.09109
    50 H −5.10491 5.84688 0.55076
    51 C −2.99731 5.4197 0.36502
    52 H −2.79484 5.57128 1.43262
    53 C −3.39447 3.40157 −1.05108
    54 C −3.57232 1.92526 −1.12888
    55 C −3.71657 1.31279 −2.37153
    56 H −3.67927 1.94073 −3.26404
    57 C −3.91339 −0.07869 −2.46324
    58 H −4.03451 −0.57193 −3.42982
    59 C −3.96461 −0.8635 −1.31372
    60 C −4.19157 −2.32906 −1.43184
    61 C −4.12406 −2.50417 1.06669
    62 C −3.88222 −1.03746 1.143
    63 C −3.74423 −0.42453 2.38593
    64 H −3.80311 −1.05006 3.279
    65 C −3.54549 0.96661 2.47719
    66 H −3.44608 1.46278 3.4447
    67 C −3.48623 1.74998 1.32688
    68 C −3.31747 3.22294 1.4481
    69 C −3.61509 1.14624 0.05258
    70 C −3.81461 −0.26254 −0.04017
    71 C −4.28574 −4.54613 −0.35472
    72 H −4.14727 −4.73597 −1.42602
    73 C −5.66877 −5.08436 0.04418
    74 H −6.43921 −4.50656 −0.4917
    75 H −5.82272 −4.94612 1.12646
    76 C −5.75417 −6.57434 −0.32562
    77 H −6.74161 −6.97438 −0.04366
    78 H −5.65997 −6.67776 −1.42202
    79 C −4.63572 −7.3772 0.35604
    80 H −4.68625 −8.43741 0.05931
    81 H −4.77895 −7.33693 1.45161
    82 C −3.25108 −6.80276 0.01492
    83 H −2.46164 −7.34764 0.55763
    84 H −3.05212 −6.89132 −1.06495
    85 C −3.19727 −5.32234 0.42263
    86 H −3.41577 −5.24744 1.49501
    87 C −1.30913 −4.56423 −1.01727
    88 C 0.04236 −3.94824 −1.11243
    89 C 0.59286 −3.68641 −2.36453
    90 H −0.002 −3.9244 −3.24873
    91 C 1.88484 −3.13735 −2.47662
    92 H 2.32913 −2.92821 −3.45184
    93 C 2.63446 −2.85592 −1.33655
    94 C 4.00589 −2.29415 −1.47539
    95 C 4.23943 −2.3449 1.01925
    96 C 2.84592 −2.85752 1.11808
    97 C 2.29492 −3.11758 2.37034
    98 H 2.90231 −2.91046 3.25378
    99 C 0.99383 −3.64475 2.48289
    100 H 0.55183 −3.85907 3.45801
    101 C 0.24226 −3.92224 1.34313
    102 C −1.11288 −4.52207 1.48108
    103 C 0.78033 −3.65728 0.06037
    104 C 2.09295 −3.11261 −0.05351
    105 C 6.05093 −1.40091 −0.41293
    106 H 6.12171 −1.12945 −1.47349
    107 C 7.18151 −2.39153 −0.08816
    108 H 7.03952 −3.29813 −0.69903
    109 H 7.12241 −2.6781 0.97363
    110 C 8.54163 −1.74084 −0.38415
    111 H 8.61101 −1.51553 −1.46418
    112 H 9.35242 −2.44856 −0.14661
    113 C 8.71066 −0.44253 0.41596
    114 H 8.70435 −0.6794 1.49565
    115 H 9.68205 0.02659 0.19065
    116 C 7.57241 0.54166 0.10858
    117 H 7.5963 0.83109 −0.95396
    118 H 7.67054 1.45504 0.71773
    119 C 6.2212 −0.11804 0.43078
    120 H 6.21698 −0.39383 1.49226
  • TABLE 5
    Optimized Coordinates of S-Δ Using PBE/6-311G**.
    Atom Number Atom Symbol x/Å y/Å z/Å
    1 O 5.3726 0.53288 1.99496
    2 O 0.01695 5.08113 2.58269
    3 O −0.18784 5.40807 −2.00465
    4 O 4.90026 0.5572 −2.58772
    5 O −3.12873 4.38442 2.04682
    6 O −4.4695 −2.5191 2.52376
    7 O −4.3801 −2.8554 −2.0689
    8 O −2.98192 4.03678 −2.54642
    9 O −2.26531 −4.83388 2.04119
    10 O 4.37202 −2.49175 2.57588
    11 O 4.7835 −2.6386 −2.00881
    12 O −1.90203 −4.8105 −2.54926
    13 N 5.05874 0.40859 −0.28616
    14 N −0.22088 5.13612 0.28414
    15 N −2.91741 4.21624 −0.24229
    16 N −4.28362 −2.7449 0.23058
    17 N −2.16187 −4.67551 −0.25569
    18 N 4.55421 −2.40453 0.2733
    19 C 4.73775 0.88167 1.00446
    20 C 3.59033 1.82384 1.10861
    21 C 3.15967 2.24873 2.36289
    22 H 3.66654 1.85065 3.24427
    23 C 2.10214 3.17143 2.47948
    24 H 1.75154 3.51141 3.45611
    25 C 1.484 3.68593 1.34219
    26 C 0.38315 4.67687 1.48599
    27 C 0.25391 4.83942 −1.01127
    28 C 1.31374 3.79926 −1.11362
    29 C 1.74287 3.37189 −2.36758
    30 H 1.26677 3.80349 −3.25041
    31 C 2.77073 2.41577 −2.48279
    32 H 3.11697 2.07084 −3.45928
    33 C 3.38277 1.89434 −1.34515
    34 C 4.4904 0.91054 −1.48876
    35 C 2.96232 2.31632 −0.06057
    36 C 1.90639 3.2672 0.05699
    37 C −1.35459 6.08117 0.43588
    38 H −1.60335 6.04004 1.50366
    39 C −0.97888 7.5282 0.0813
    40 H −0.73537 7.59265 −0.99104
    41 H −0.08192 7.80835 0.65723
    42 C −2.15126 8.46162 0.4194
    43 H −1.88888 9.49988 0.15824
    44 H −2.33102 8.43542 1.50955
    45 C −3.43015 8.03022 −0.31385
    46 H −4.27116 8.68753 −0.03924
    47 H −3.27671 8.13558 −1.40335
    48 C −3.7842 6.57021 0.0061
    49 H −4.67042 6.25192 −0.56656
    50 H −4.00701 6.45661 1.07898
    51 C −2.60341 5.66098 −0.37284
    52 H −2.38932 5.79912 −1.43998
    53 C −3.13783 3.67821 1.04355
    54 C −3.38473 2.21256 1.12552
    55 C −3.55529 1.61137 2.37021
    56 H −3.48408 2.23903 3.26081
    57 C −3.82271 0.23209 2.46549
    58 H −3.96822 −0.25234 3.43314
    59 C −3.92115 −0.55053 1.31761
    60 C −4.24263 −1.9977 1.439
    61 C −4.19051 −2.18269 −1.06016
    62 C −3.85438 −0.7349 −1.13859
    63 C −3.68477 −0.13335 −2.38322
    64 H −3.78127 −0.75622 −3.27486
    65 C −3.41114 1.24472 −2.47806
    66 H −3.28542 1.73304 −3.44653
    67 C −3.30907 2.02645 −1.32983
    68 C −3.05838 3.48732 −1.45451
    69 C −3.46812 1.43389 −0.05388
    70 C −3.74147 0.03785 0.04237
    71 C −4.5673 −4.19349 0.36561
    72 H −4.45623 −4.39359 1.43811
    73 C −6.00274 −4.55698 −0.049
    74 H −6.12612 −4.38604 −1.13063
    75 H −6.70251 −3.89578 0.48769
    76 C −6.2786 −6.0288 0.29752
    77 H −6.22335 −6.15631 1.39381
    78 H −7.3019 −6.30083 −0.00891
    79 C −5.25422 −6.95733 −0.37148
    80 H −5.36755 −6.89177 −1.46879
    81 H −5.44077 −8.00548 −0.08664
    82 C −3.8188 −6.56091 0.00377
    83 H −3.65774 −6.67022 1.08811
    84 H −3.08918 −7.19832 −0.52152
    85 C −3.57592 −5.09644 −0.40316
    86 H −3.7769 −4.99893 −1.47687
    87 C −1.61766 −4.54545 1.03932
    88 C −0.21992 −4.04111 1.13123
    89 C 0.35104 −3.81643 2.38148
    90 H −0.25746 −4.00664 3.26798
    91 C 1.67929 −3.36009 2.4889
    92 H 2.13971 −3.17908 3.46233
    93 C 2.44347 −3.13139 1.34688
    94 C 3.84852 −2.65745 1.48098
    95 C 4.06997 −2.7208 −1.01387
    96 C 2.64906 −3.15279 −1.10808
    97 C 2.08091 −3.38244 −2.35863
    98 H 2.69844 −3.21785 −3.24395
    99 C 0.74746 −3.82224 −2.46661
    100 H 0.28942 −4.01051 −3.43973
    101 C −0.01985 −4.04108 −1.32487
    102 C −1.41695 −4.5354 −1.45912
    103 C 0.53585 −3.80797 −0.04347
    104 C 1.88332 −3.35474 0.06561
    105 C 5.92898 −1.85968 0.40941
    106 H 6.01743 −1.59197 1.46944
    107 C 7.01471 −2.89868 0.08117
    108 H 6.83493 −3.7971 0.69421
    109 H 6.9399 −3.18519 −0.97981
    110 C 8.40245 −2.30745 0.37269
    111 H 9.18073 −3.05045 0.13402
    112 H 8.4846 −2.08455 1.45236
    113 C 8.62701 −1.01869 −0.42918
    114 H 9.61817 −0.59248 −0.20506
    115 H 8.60867 −1.25636 −1.50848
    116 C 7.53257 0.01364 −0.12113
    117 H 7.5718 0.30388 0.94099
    118 H 7.66772 0.92127 −0.732
    119 C 6.15203 −0.58622 −0.43621
    120 H 6.12779 −0.8621 −1.49768
  • TABLE 6
    Optimized Coordinates of the (RS)-Dimer Using PBE/6-311G**.
    Atom Number Atom Symbol x/Å y/Å z/Å
    1 O −5.7415 −5.47905 −0.70242
    2 O −6.38613 −0.03263 −5.11984
    3 O −1.80182 0.4228 −5.25373
    4 O −1.17196 −5.19616 −0.99689
    5 O −6.00945 2.93662 −4.30983
    6 O −6.48576 3.74334 2.66455
    7 O −1.9004 4.14485 2.94902
    8 O −1.47115 3.53927 −4.0941
    9 O −5.93398 1.80692 4.99815
    10 O −6.2812 −4.69457 2.29231
    11 O −1.67786 −4.93601 2.26718
    12 O −1.35451 1.57278 5.02411
    13 N −3.45158 −5.22352 −0.67947
    14 N −4.09419 0.28101 −5.12527
    15 N −3.70944 3.00868 −4.18546
    16 N −4.18432 3.89419 2.84527
    17 N −3.63633 1.78551 4.80293
    18 N −3.97398 −4.80036 2.17093
    19 C −4.7549 −4.85216 −1.07509
    20 C −4.86871 −3.66192 −1.95959
    21 C −6.13042 −3.18949 −2.31557
    22 H −7.00573 −3.69813 −1.9063
    23 C −6.26042 −2.09863 −3.19457
    24 H −7.24169 −1.73068 −3.50118
    25 C −5.12903 −1.4742 −3.7164
    26 C −5.28729 −0.36745 −4.69583
    27 C −2.79234 −0.14841 −4.79997
    28 C −2.67509 −1.32088 −3.89222
    29 C −1.41779 −1.83831 −3.59243
    30 H −0.53334 −1.39948 −4.06022
    31 C −1.28596 −2.95234 −2.73775
    32 H −0.29769 −3.37878 −2.54559
    33 C −2.4133 −3.53579 −2.16223
    34 C −2.26633 −4.69999 −1.25207
    35 C −3.70528 −3.03999 −2.47344
    36 C −3.8377 −1.92724 −3.35513
    37 C −4.27012 1.41482 −6.0668
    38 H −5.35155 1.59827 −6.06806
    39 C −3.83495 1.0689 −7.49898
    40 H −4.31782 0.12465 −7.7985
    41 H −2.74274 0.92188 −7.52549
    42 C −4.2466 2.20852 −8.44395
    43 H −3.92749 1.97479 −9.47289
    44 H −5.34902 2.28412 −8.45607
    45 C −3.64987 3.55013 −7.99203
    46 H −2.54874 3.50312 −8.07701
    47 H −3.99098 4.36418 −8.65219
    48 C −4.02138 3.8669 −6.53469
    49 H −5.11097 3.99509 −6.42839
    50 H −3.52882 4.79494 −6.20245
    51 C −3.55709 2.71443 −5.63026
    52 H −2.47713 2.58089 −5.76907
    53 C −5.00138 3.02121 −3.61608
    54 C −5.07166 3.13493 −2.13543
    55 C −6.3051 3.03026 −1.49523
    56 H −7.19027 2.84276 −2.10677
    57 C −6.39842 3.1894 −0.10065
    58 H −7.35988 3.13653 0.41391
    59 C −5.25825 3.44666 0.65802
    60 C −5.39125 3.69661 2.11663
    61 C −2.90362 3.96478 2.26028
    62 C −2.82558 3.82293 0.78144
    63 C −1.60689 4.00435 0.13229
    64 H −0.72282 4.2771 0.71324
    65 C −1.5157 3.8787 −1.26956
    66 H −0.56254 4.06321 −1.77302
    67 C −2.64115 3.54853 −2.02249
    68 C −2.53065 3.37921 −3.49375
    69 C −3.89837 3.38786 −1.38416
    70 C −3.99296 3.5405 0.02981
    71 C −4.33385 4.15939 4.29858
    72 H −5.40077 3.99507 4.49299
    73 C −3.99701 5.61536 4.65905
    74 H −4.56882 6.28273 3.99366
    75 H −2.92332 5.80206 4.49299
    76 C −4.35877 5.87758 6.12942
    77 H −4.11978 6.92081 6.39342
    78 H −5.44829 5.74848 6.2634
    79 C −3.61626 4.90487 7.05633
    80 H −3.89538 5.0823 8.10758
    81 H −2.52873 5.08504 6.97178
    82 C −3.91322 3.44795 6.67576
    83 H −3.33532 2.75395 7.30753
    84 H −4.98415 3.22485 6.80625
    85 C −3.52269 3.20772 5.20599
    86 H −2.45778 3.44068 5.08821
    87 C −4.91816 1.2085 4.6607
    88 C −4.96833 −0.15305 4.06493
    89 C −6.20121 −0.7229 3.75416
    90 H −7.10292 −0.13806 3.94757
    91 C −6.27006 −2.02195 3.2175
    92 H −7.22853 −2.48855 2.98128
    93 C −5.10623 −2.75338 2.98749
    94 C −5.202 −4.14221 2.46517
    95 C −2.70012 −4.28883 2.49092
    96 C −2.65001 −2.93146 3.09795
    97 C −1.42724 −2.3939 3.49198
    98 H −0.52082 −2.99612 3.40125
    99 C −1.35576 −1.09559 4.03876
    100 H −0.39358 −0.69091 4.36531
    101 C −2.51098 −0.33006 4.18688
    102 C −2.4243 1.05981 4.70562
    103 C −3.77261 −0.87689 3.83837
    104 C −3.84315 −2.19219 3.29355
    105 C −4.08444 −6.1607 1.58433
    106 H −5.14993 −6.27108 1.34859
    107 C −3.69144 −7.26147 2.58424
    108 H −4.26949 −7.11525 3.51145
    109 H −2.62074 −7.16946 2.82883
    110 C −3.98239 −8.64188 1.97466
    111 H −5.06969 −8.73851 1.80022
    112 H −3.69647 −9.4322 2.68792
    113 C −3.2398 −8.82408 0.64425
    114 H −2.15054 −8.80007 0.83094
    115 H −3.47401 −9.8069 0.20421
    116 C −3.60484 −7.70682 −0.34418
    117 H −4.67832 −7.74911 −0.59106
    118 H −3.03091 −7.81045 −1.27951
    119 C −3.27672 −6.34101 0.28138
    120 H −2.20819 −6.32379 0.52722
    121 O 5.74044 5.49435 0.71445
    122 O 6.3908 0.03446 5.11345
    123 O 1.80676 −0.42436 5.24824
    124 O 1.17153 5.20062 0.99931
    125 O 6.01265 −2.94208 4.30506
    126 O 6.48669 −3.79222 −2.66607
    127 O 1.8974 −4.13479 −2.95389
    128 O 1.47243 −3.5324 4.08921
    129 O 5.93656 −1.81437 −4.96572
    130 O 6.27719 4.69508 −2.27933
    131 O 1.67385 4.93944 −2.27092
    132 O 1.35713 −1.5688 −5.02891
    133 N 3.4513 5.23111 0.6833
    134 N 4.09898 −0.28017 5.11989
    135 N 3.71261 −3.00908 4.18012
    136 N 4.18333 −3.90659 −2.84915
    137 N 3.63736 −1.78589 −4.79381
    138 N 3.96974 4.80302 −2.16629
    139 C 4.75483 4.86218 1.08071
    140 C 4.86972 3.67071 1.96327
    141 C 6.13189 3.19971 2.31944
    142 H 7.00669 3.71072 1.91205
    143 C 6.26291 2.10677 3.19565
    144 H 7.2445 1.73938 3.50191
    145 C 5.13206 1.47934 3.71502
    146 C 5.29144 0.36995 4.69125
    147 C 2.79667 0.14885 4.79567
    148 C 2.6782 1.3224 3.88929
    149 C 1.42035 1.83871 3.58963
    150 H 0.53623 1.39821 4.05637
    151 C 1.28741 2.95408 2.73682
    152 H 0.29872 3.3795 2.54424
    153 C 2.4143 3.54021 2.1632
    154 C 2.26633 4.70533 1.25438
    155 C 3.7068 3.04578 2.47458
    156 C 3.84028 1.93145 3.35412
    157 C 4.27619 −1.41472 6.06037
    158 H 5.35749 −1.59895 6.05927
    159 C 3.84408 −1.06837 7.49344
    160 H 2.75219 −0.91924 7.5217
    161 H 4.3292 −0.12502 7.7922
    162 C 4.25486 −2.20864 8.4379
    163 H 3.9379 −1.97402 9.46731
    164 H 5.35712 −2.28674 8.44822
    165 C 3.65437 −3.54885 7.98696
    166 H 3.9942 −4.36361 8.6469
    167 H 2.55344 −3.49913 8.07301
    168 C 4.02397 −3.86654 6.5294
    169 H 3.52941 −4.79374 6.19776
    170 H 5.11321 −3.99687 6.42242
    171 C 3.56115 −2.71351 5.62481
    172 H 2.48145 −2.57832 5.76402
    173 C 5.00474 −3.02807 3.61123
    174 C 5.07552 −3.15015 2.13114
    175 C 6.31039 −3.05921 1.49146
    176 H 7.1968 −2.8771 2.10285
    177 C 6.40346 −3.22483 0.09755
    178 H 7.36592 −3.18368 −0.41623
    179 C 5.26145 −3.47269 −0.66139
    180 C 5.39256 −3.72765 −2.1194
    181 C 2.90219 −3.96629 −2.26445
    182 C 2.82533 −3.82542 −0.78559
    183 C 1.60524 −3.99727 −0.13662
    184 H 0.7194 −4.26459 −0.71723
    185 C 1.51477 −3.87029 1.26505
    186 H 0.5606 −4.04912 1.76857
    187 C 2.64217 −3.54664 2.01776
    188 C 2.53243 −3.37607 3.48879
    189 C 3.90081 −3.39604 1.37975
    190 C 3.99484 −3.55241 −0.03386
    191 C 4.3294 −4.1661 −4.30346
    192 H 5.3972 −4.00883 −4.4984
    193 C 3.98116 −5.61745 −4.67177
    194 H 2.90575 −5.79568 −4.50778
    195 H 4.54663 −6.29312 −4.00936
    196 C 4.34345 −5.87475 −6.14311
    197 H 5.43465 −5.75654 −6.27326
    198 H 4.0944 −6.91391 −6.41382
    199 C 3.61412 −4.88927 −7.06728
    200 H 2.52461 −5.06007 −6.98949
    201 H 3.89714 −5.06233 −8.11822
    202 C 3.92083 −3.43717 −6.67553
    203 H 4.9942 −3.22123 −6.79808
    204 H 3.35171 −2.73458 −7.30574
    205 C 3.5239 −3.20537 −5.20628
    206 H 2.45805 −3.43723 −5.09498
    207 C 4.91912 −1.21251 −4.63902
    208 C 4.96763 0.14981 −4.04465
    209 C 6.19958 0.71882 −3.72858
    210 H 7.10163 0.13266 −3.91632
    211 C 6.26736 2.01916 −3.19492
    212 H 7.22523 2.4854 −2.9556
    213 C 5.10329 2.75243 −2.97215
    214 C 5.19818 4.14289 −2.45396
    215 C 2.69656 4.29074 −2.48804
    216 C 2.64784 2.9324 −3.09299
    217 C 1.42614 2.3953 −3.4908
    218 H 0.52006 2.99848 −3.403
    219 C 1.35591 1.0968 −4.0373
    220 H 0.3949 0.69277 −4.36808
    221 C 2.51116 0.33021 −4.18017
    222 C 2.4257 −1.05842 −4.70238
    223 C 3.77169 0.87566 −3.82565
    224 C 3.84106 2.19175 −3.28247
    225 C 4.07965 6.16502 −1.58316
    226 H 5.14562 6.27699 −1.35039
    227 C 3.68343 7.26357 −2.58414
    228 H 4.25864 7.11554 −3.51284
    229 H 2.61196 7.1712 −2.82522
    230 C 3.97645 8.64504 −1.97788
    231 H 3.68827 9.4341 −2.69163
    232 H 5.06435 8.74186 −1.80729
    233 C 3.23841 8.82992 −0.64523
    234 H 3.47452 9.81342 −0.20771
    235 H 2.14854 8.80616 −0.82832
    236 C 3.60595 7.71423 0.34414
    237 H 4.6802 7.75635 0.58768
    238 H 3.03481 7.81959 1.28097
    239 C 3.27534 6.34776 −0.27835
    240 H 2.20625 6.33106 −0.5216
  • TABLE 7
    Optimized Coordinates of the (RR)-Dimer Using PBE/6-311G**.
    Atom Number Atom Symbol x/Å y/Å z/Å
    1 O −5.86015 −5.38639 −0.60631
    2 O −6.36431 −0.03957 −5.16036
    3 O −1.76911 0.33179 −5.26851
    4 O −1.28957 −5.23085 −0.91492
    5 O −5.96005 2.93948 −4.36473
    6 O −6.42141 4.25907 2.53659
    7 O −1.82224 4.25257 2.87091
    8 O −1.41229 3.45929 −4.15532
    9 O −5.97206 2.13651 4.72337
    10 O −6.38357 −4.48208 2.33267
    11 O −1.78164 −4.79265 2.34616
    12 O −1.41814 1.74004 5.05003
    13 N −3.56546 −5.18164 −0.58496
    14 N −4.06746 0.2375 −5.15
    15 N −3.6602 2.97634 −4.23571
    16 N −4.11937 4.16913 2.74986
    17 N −3.67132 2.02591 4.68446
    18 N −4.07722 −4.63209 2.23925
    19 C −4.85919 −4.79255 −0.99388
    20 C −4.94339 −3.62277 −1.91005
    21 C −6.19199 −3.12606 −2.277
    22 H −7.08075 −3.60099 −1.85647
    23 C −6.29163 −2.05294 −3.18149
    24 H −7.26229 −1.66615 −3.49829
    25 C −5.14411 −1.46995 −3.71578
    26 C −5.27505 −0.38355 −4.71986
    27 C −2.77438 −0.21495 −4.81655
    28 C −2.68517 −1.38223 −3.897
    29 C −1.44282 −1.93238 −3.58776
    30 H −0.541 −1.53055 −4.05697
    31 C −1.34524 −3.02726 −2.70449
    32 H −0.3727 −3.4823 −2.50209
    33 C −2.4876 −3.56496 −2.11669
    34 C −2.36972 −4.70966 −1.17868
    35 C −3.7647 −3.04315 −2.43933
    36 C −3.86409 −1.94683 −3.3455
    37 C −4.22591 1.36275 −6.10379
    38 H −5.30557 1.55595 −6.1142
    39 C −3.78528 0.99951 −7.5302
    40 H −4.27326 0.05556 −7.82233
    41 H −2.69406 0.84464 −7.54954
    42 C −4.18395 2.13211 −8.48894
    43 H −3.8618 1.88561 −9.51392
    44 H −5.28563 2.21554 −8.50676
    45 C −3.57972 3.4738 −8.047
    46 H −2.47867 3.41837 −8.12718
    47 H −3.91252 4.28395 −8.71608
    48 C −3.95551 3.80672 −6.59449
    49 H −5.04467 3.94471 −6.49514
    50 H −3.45713 4.73403 −6.26908
    51 C −3.50567 2.65978 −5.67569
    52 H −2.42646 2.51554 −5.80884
    53 C −4.95287 3.04549 −3.67259
    54 C −5.02614 3.25324 −2.20064
    55 C −6.26764 3.26603 −1.56807
    56 H −7.16004 3.10081 −2.17541
    57 C −6.35776 3.51451 −0.18616
    58 H −7.32381 3.56234 0.3203
    59 C −5.20765 3.73171 0.56999
    60 C −5.33225 4.07068 2.01031
    61 C −2.8315 4.13131 2.17743
    62 C −2.75337 3.94299 0.70338
    63 C −1.5231 4.0236 0.05337
    64 H −0.62227 4.2659 0.62396
    65 C −1.44017 3.83497 −1.34158
    66 H −0.48513 3.96111 −1.85719
    67 C −2.57967 3.53889 −2.08489
    68 C −2.47364 3.33381 −3.55077
    69 C −3.84554 3.4764 −1.45089
    70 C −3.93368 3.70239 −0.04624
    71 C −4.26574 4.44163 4.19988
    72 H −5.34295 4.34782 4.38351
    73 C −3.83287 5.86713 4.58075
    74 H −4.33733 6.58081 3.90928
    75 H −2.74469 5.97215 4.44091
    76 C −4.21426 6.14193 6.04478
    77 H −3.89569 7.15778 6.33073
    78 H −5.31443 6.10774 6.14145
    79 C −3.5906 5.10095 6.98647
    80 H −3.90676 5.28397 8.02624
    81 H −2.49026 5.19981 6.95826
    82 C −3.96763 3.6725 6.5678
    83 H −3.46276 2.93381 7.21104
    84 H −5.05562 3.51582 6.64651
    85 C −3.5282 3.4377 5.11234
    86 H −2.45151 3.63354 5.0416
    87 C −4.95976 1.49111 4.47104
    88 C −5.02178 0.10824 3.92271
    89 C −6.2567 −0.44822 3.59728
    90 H −7.15198 0.16023 3.74115
    91 C −6.33687 −1.76807 3.11534
    92 H −7.29816 −2.22777 2.8774
    93 C −5.18276 −2.53029 2.94416
    94 C −5.29653 −3.94044 2.48889
    95 C −2.79639 −4.12564 2.54346
    96 C −2.73107 −2.74949 3.10779
    97 C −1.50632 −2.21704 3.50595
    98 H −0.60179 −2.82777 3.44252
    99 C −1.43013 −0.90627 4.02093
    100 H −0.4726 −0.50657 4.36443
    101 C −2.57568 −0.12165 4.12886
    102 C −2.47899 1.26249 4.65746
    103 C −3.83673 −0.65018 3.75796
    104 C −3.91542 −1.98213 3.25519
    105 C −4.20858 −6.01544 1.71463
    106 H −5.27712 −6.12182 1.49088
    107 C −3.82527 −7.07821 2.7579
    108 H −4.39165 −6.88225 3.68305
    109 H −2.75068 −6.99605 2.98882
    110 C −4.14862 −8.47698 2.21068
    111 H −5.23932 −8.55997 2.05163
    112 H −3.87016 −9.24167 2.95414
    113 C −3.42367 −8.73198 0.88151
    114 H −2.33254 −8.72628 1.05796
    115 H −3.68526 −9.72639 0.4852
    116 C −3.77071 −7.6483 −0.15073
    117 H −4.84579 −7.67816 −0.3923
    118 H −3.20268 −7.80103 −1.08285
    119 C −3.41192 −6.2653 0.41687
    120 H −2.34208 −6.2606 0.65804
    121 O 6.47811 −1.4608 −4.57332
    122 O 5.84886 5.04662 −1.96556
    123 O 1.30335 4.8272 −2.45832
    124 O 1.8856 −1.79391 −4.89432
    125 O 6.29935 4.97182 1.06189
    126 O 5.90095 −0.62578 5.31039
    127 O 1.33215 −0.27331 5.3666
    128 O 1.69374 5.19847 0.89281
    129 O 6.42455 −3.26265 3.81211
    130 O 6.03287 −4.13238 −3.16602
    131 O 1.46496 −4.41735 −2.88499
    132 O 1.82091 −3.35658 4.10012
    133 N 4.17788 −1.68337 −4.68583
    134 N 3.5524 4.85303 −1.98076
    135 N 3.99342 5.06163 0.89274
    136 N 3.60114 −0.59453 5.17271
    137 N 4.11774 −3.20267 3.97493
    138 N 3.73251 −4.0716 −3.06565
    139 C 2.71105 4.63272 1.29209
    140 C 5.37274 −0.98479 −4.34862
    141 C 5.20994 0.35339 −3.72377
    142 C 6.33829 1.05712 −3.30563
    143 H 7.31378 0.57837 −3.41161
    144 C 6.21559 2.35935 −2.787
    145 H 7.08999 2.92972 −2.46687
    146 C 4.96399 2.96304 −2.69191
    147 C 4.85819 4.36012 −2.1925
    148 C 2.38223 4.24186 −2.49169
    149 C 2.52577 2.87269 −3.04872
    150 C 1.40731 2.19431 −3.52766
    151 H 0.43606 2.69561 −3.53713
    152 C 1.52758 0.88127 −4.02792
    153 H 0.6458 0.36597 −4.41813
    154 C 2.76852 0.24812 −4.05921
    155 C 2.87937 −1.14344 −4.57378
    156 C 3.92636 0.94023 −3.62039
    157 C 3.80327 2.26212 −3.10118
    158 C 3.36825 6.16178 −1.30953
    159 H 2.29358 6.21511 −1.09926
    160 C 3.74579 7.35365 −2.20289
    161 H 4.82682 7.32173 −2.4136
    162 H 3.20404 7.25849 −3.15786
    163 C 3.37141 8.66622 −1.49511
    164 H 3.64891 9.52577 −2.12668
    165 H 2.27472 8.70046 −1.36066
    166 C 4.04929 8.76502 −0.12073
    167 H 3.75078 9.69492 0.38987
    168 H 5.14517 8.80461 −0.25922
    169 C 3.69929 7.55219 0.75386
    170 H 2.61585 7.52256 0.95402
    171 H 4.22594 7.60626 1.72056
    172 C 4.12674 6.264 0.03211
    173 H 5.20127 6.32904 −0.17877
    174 C 5.21388 4.47956 1.34234
    175 C 5.10249 3.2546 2.1745
    176 C 6.26076 2.59523 2.58278
    177 H 7.22259 2.98116 2.2393
    178 C 6.18332 1.47914 3.43612
    179 H 7.08108 0.95988 3.77764
    180 C 4.947 1.02501 3.8897
    181 C 4.8878 −0.11811 4.84111
    182 C 2.39851 0.09265 4.87977
    183 C 2.49357 1.25663 3.96385
    184 C 1.34272 1.95478 3.60652
    185 H 0.38299 1.66323 4.04037
    186 C 1.41747 3.05722 2.73031
    187 H 0.50968 3.60992 2.47422
    188 C 2.64608 3.47096 2.22005
    189 C 3.83443 2.79986 2.60697
    190 C 3.75734 1.67447 3.4792
    191 C 3.46394 −1.8181 5.99876
    192 H 2.39412 −2.05615 5.95761
    193 C 3.85112 −1.59233 7.46838
    194 H 3.29552 −0.71912 7.84675
    195 H 4.92896 −1.37102 7.53123
    196 C 3.50878 −2.84698 8.28699
    197 H 3.80014 −2.69814 9.33947
    198 H 2.41431 −2.99983 8.27138
    199 C 4.20094 −4.09169 7.71129
    200 H 3.91797 −4.9894 8.28462
    201 H 5.29578 −3.97445 7.80667
    202 C 3.85128 −4.28512 6.22731
    203 H 4.39424 −5.14816 5.80902
    204 H 2.77095 −4.46531 6.10559
    205 C 4.25053 −3.02538 5.44335
    206 H 5.3216 −2.84239 5.59663
    207 C 5.33903 −3.2831 3.24616
    208 C 5.22868 −3.40071 1.76978
    209 C 6.38575 −3.3982 0.99255
    210 H 7.34595 −3.2731 1.49699
    211 C 6.31036 −3.57876 −0.40086
    212 H 7.20783 −3.59321 −1.02265
    213 C 5.07664 −3.76616 −1.01996
    214 C 5.0193 −4.00862 −2.48689
    215 C 2.53182 −4.1828 −2.32396
    216 C 2.62756 −3.99435 −0.85434
    217 C 1.47982 −4.06608 −0.06882
    218 H 0.52185 −4.30777 −0.53585
    219 C 1.55328 −3.8673 1.32514
    220 H 0.6487 −3.9466 1.93371
    221 C 2.77686 −3.60675 1.93838
    222 C 2.83804 −3.3817 3.40833
    223 C 3.963 −3.57455 1.16112
    224 C 3.88814 −3.76493 −0.24998
    225 C 3.59897 −4.1513 −4.53898
    226 H 2.5256 −4.02099 −4.7223
    227 C 4.0129 −5.51584 −5.11335
    228 H 3.48648 −6.30576 −4.55354
    229 H 5.09713 −5.66029 −4.97922
    230 C 3.64494 −5.5692 −6.60427
    231 H 3.93595 −6.54395 −7.02816
    232 H 2.54794 −5.48067 −6.70681
    233 C 4.3186 −4.42487 −7.3755
    234 H 4.03082 −4.45289 −8.43903
    235 H 5.41544 −4.55572 −7.32939
    236 C 3.95467 −3.05955 −6.77075
    237 H 4.48645 −2.24906 −7.29541
    238 H 2.87229 −2.87584 −6.86247
    239 C 4.35465 −3.0302 −5.28683
    240 H 5.43151 −3.22655 −5.21056
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Claims (24)

1. A supramolecular assembly comprising a mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds.
2. The supramolecular assembly of claim 1, wherein the mixture is a racemic mixture of a first rigid macrocycle enantiomer and a second rigid macrocycle enantiomer.
3. The supramolecular assembly of claim 1, wherein the mixture of rigid macrocycles comprises a first rigid triangular macrocycle enantiomer and a second rigid triangular macrocycle enantiomer.
4. The supramolecular assembly of claim 2, wherein the first rigid macrocycle enantiomer is a rigid napthalenediimide-based macrocycle enantiomer or a derivative thereof and the second rigid macrocycle enantiomer is a rigid napthalenediimide-based macrocycle enantiomer or a derivative thereof.
5. The supramolecular assembly of claim 4, wherein the first rigid napthalenediimide-based macrocycle enantiomer is the compound of:
Figure US20190016738A1-20190117-C00004
or a derivative thereof and the second rigid napthalenediimide-based macrocycle enantiomer is a compound of:
Figure US20190016738A1-20190117-C00005
or a derivative thereof.
6. The supramolecular assembly of claim 2, wherein the first rigid macrocycle enantiomer cooperatively interacts with the second rigid macrocycle enantiomer through [C—H . . . O] hydrogen bonds.
7. The supramolecular assembly of claim 1, wherein the supramolecular assembly is a gel.
8. The supramolecular assembly of claim 1, wherein the supramolecular assembly is a precipitate.
9. The supramolecular assembly of claim 1 wherein the supramolecular assembly has a fibrillar morphology or a needle morphology.
10. The supramolecular assembly of claim 1, wherein the supramolecular assembly has a high-aspect ratio.
11. The supramolecular assembly of claim 1, wherein the supramolecular assembly has a first dimension of less than about 3 nm and a second dimension of greater than about 100 nm.
12. The supramolecular assembly of claim 2, wherein the first rigid macrocycle enantiomer and the second rigid macrocycle enantiomer coaxially stack in an alternating fashion.
13. A method for preparing a supramolecular assembly, the method comprising providing a mixture of rigid macrocycles capable of interacting through [C—H . . . O] hydrogen bonds, the mixture of rigid macrocycles comprising a first rigid macrocycle enantiomer and a second rigid macrocycle enantiomer, and providing a solvent.
14. The method of claim 13, wherein the mixture of rigid macrocycles is an equimolar mixture of the first rigid macrocycle and the second rigid macrocycle.
15. The method of claim 13, wherein providing the mixture of rigid macrocycles comprises mixing a first solution, the first solution comprising the first rigid macrocycle, and a second solution, the second solution comprising the second rigid macrocycle.
16. The method of claim 13, wherein providing the mixture of rigid macrocycles comprises dissolving the first rigid macrocycle and/or the second rigid macrocycle.
17. The method of claim 13, wherein the solvent is a halogenated alkane.
18. The method of claim 13, wherein the solvent comprises a member selected from the group consisting of CH2Cl2, CHCl3, ClCH2CH2Cl, ClCH2CH2Br, ClCH2CH2I, BrCH2CH2Br, and any combination thereof.
19. A battery comprising the supramolecular assembly as in claim 1.
20. The battery of claim 19, wherein the battery is a lithium battery.
21. (canceled)
22. (canceled)
23. (canceled)
24. (canceled)
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