US20140213788A1 - Process for the preparation of alpha-acyloxy beta-formamido amides - Google Patents

Process for the preparation of alpha-acyloxy beta-formamido amides Download PDF

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US20140213788A1
US20140213788A1 US14/228,978 US201414228978A US2014213788A1 US 20140213788 A1 US20140213788 A1 US 20140213788A1 US 201414228978 A US201414228978 A US 201414228978A US 2014213788 A1 US2014213788 A1 US 2014213788A1
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Eelco Ruijter
Romano Orru
Anass Znabet
Marloes Polak
Nicholas Turner
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Vereniging voor Christelijik Hoger Onderwijs Wetenschappelijk Onderzoek en Patientenzorg
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C291/00Compounds containing carbon and nitrogen and having functional groups not covered by groups C07C201/00 - C07C281/00
    • C07C291/10Isocyanides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C231/00Preparation of carboxylic acid amides
    • C07C231/06Preparation of carboxylic acid amides from nitriles by transformation of cyano groups into carboxamide groups
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C237/00Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by amino groups
    • C07C237/02Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by amino groups having the carbon atoms of the carboxamide groups bound to acyclic carbon atoms of the carbon skeleton
    • C07C237/14Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by amino groups having the carbon atoms of the carboxamide groups bound to acyclic carbon atoms of the carbon skeleton the carbon skeleton being saturated and containing rings
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D209/00Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D209/02Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom condensed with one carbocyclic ring
    • C07D209/52Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom condensed with one carbocyclic ring condensed with a ring other than six-membered
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D209/00Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D209/56Ring systems containing three or more rings
    • C07D209/58[b]- or [c]-condensed
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    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D209/00Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D209/56Ring systems containing three or more rings
    • C07D209/80[b, c]- or [b, d]-condensed
    • C07D209/94[b, c]- or [b, d]-condensed containing carbocyclic rings other than six-membered
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D241/00Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings
    • C07D241/02Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings not condensed with other rings
    • C07D241/10Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members
    • C07D241/14Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D241/24Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D403/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
    • C07D403/02Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
    • C07D403/06Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D403/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
    • C07D403/02Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
    • C07D403/12Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a chain containing hetero atoms as chain links
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C2601/00Systems containing only non-condensed rings
    • C07C2601/02Systems containing only non-condensed rings with a three-membered ring
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C2601/00Systems containing only non-condensed rings
    • C07C2601/04Systems containing only non-condensed rings with a four-membered ring

Definitions

  • the present invention relates to ⁇ -acyloxy ⁇ -formamido amides, methods for their preparation, and their use as intermediate for the preparation of isocyanide building block for the preparation of prolyl peptide inhibitors of disease-associated targets.
  • ⁇ -hydroxy- ⁇ -aminocarboxylic acid and amide derivatives are found in a variety of natural products and pharmaceutically active substances.
  • inhibitors incorporating the ⁇ -hydroxy- ⁇ -aminocarboxylic acid motif have been termed “norstatine” derivatives, and serve as key intermediates for the synthesis of the general class of P1- ⁇ -ketocarboxylic transition-state inhibitors of serine or cysteine proteases. Such inhibitors are finding increasing applications in medicine for the treatment of a diverse array of disease states including thrombosis, cancer, and osteoporosis.
  • ⁇ -hydroxy- ⁇ -aminocarboxylic acid, ester and amide derivatives serve an important role as the most common precursors for the preparation of these ⁇ -hydroxy- ⁇ -aminocarboxylic acid -incorporating drug candidates.
  • Electrophilic ⁇ -dicarbonyl compounds are regarded as interesting and highly reactive functional arrays which are capable of undergoing a myriad of transformations.
  • Multicomponent reactions such as the Passerini and Ugi reactions offer the ability to rapidly and efficiently generate collections of structurally and functionally diverse organic compounds.
  • the Passerini reaction is a chemical reaction involving isocyanides, aldehydes or ketones, and carboxylic acids to form ⁇ -acyloxy amides.
  • Compounds that are available through the Passerini reaction may form highly valuable building blocks in the convergent synthesis of compounds with medicinal effects, such as for instance the prolyl dipeptide inhibitors Telaprevir or Boceprevir.
  • WO2007/0022450 discloses for instance the preparation of a cyclopropylamide by the coupling of Cb-norvalinal with cyclopropyl isocyanide in the presence of trifluoroacetic acid. The obtained compound is then deprotected, and the aminoalcohol then employed in a synthesis of Telaprevir.
  • the disclosed synthesis is cumbersome, and only allows for a limited yield and variation of the building blocks involved.
  • the subject invention now provides for a synthesis of ⁇ -hydroxy- ⁇ -aminocarboxylic acid derivatives such as to ⁇ -acyloxy ⁇ -formamido amides that advantageously can be employed in multicomponent reactions (MCRs), such as Passerini and Ugi reactions, which allow convergent syntheses with high atom and step efficiency in good yield.
  • MCRs multicomponent reactions
  • the present invention relates to a process for the preparation of a compound of the general formula I
  • R 1 represents a hydrogen atom, a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, monocyclic, polycyclic or alkylcycloalkyl or a heterocyclic structure
  • R 2 represents a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure
  • R 3 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl structure, or a protective group that can reversible be removed.
  • the present invention provides novel methods for the synthesis of ⁇ -hydroxy- ⁇ -amino acid and amide derivatives according to formula I and intermediates thereto. These derivatives may be advantageously be employed as intermediates for synthesis of peptidyl ⁇ -ketoamides and ⁇ -hydroxy- ⁇ -amino carboxylic acid derivatives which are useful as inhibitors of certain proteases, including serine and cysteine proteases.
  • the process preferably involves reacting an N-terminally protected amino aldehyde with an isonitrile and a carboxylic acid to give an amino ⁇ -acyloxy carboxamide.
  • the acyl group may then be removed to give the derivative, or may advantageously remain in position. Alternatively, the protecting group may removed and an acyl shift may advantageously take place.
  • the reaction is performed under such conditions that compound I is formed.
  • the process according to present invention provides an improved synthetic route to intermediates for the end target compounds, with economy of synthesis, namely fewer synthetic steps, improved yields, less consumption of reagents and fewer side products than are obtained following conventional synthetic routes.
  • R 1 preferably represents a hydrogen, a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl preferably —CH 2 -cyclopropyl or —CH 2 -cyclobutyl, an aryl, alkylene-aryl, SO 2 -alkyl, SO 2 -aryl, alkylene-SO 2 -aryl, -alkylene-SO 2 -alkyl, heterocyclyl or alkylene-heterocyclyl; CH 2 CO—X—H, —CH 2 CO—X-straight chain alkyl, —CH 2 CO—X-branched chain alkyl, —CH 2 CO—X-cycloalkyl, —CH 2 CO—X-alkylene-cycloalkyl, —CH 2 CO—X-aryl, —CH 2 CO—X-alkylene-aryl, —CH 2 CO—X-hetero
  • R 2 preferably represents hydrogen, a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl, an aryl, and/or alkylene-aryl.
  • R 3 preferably represents a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl, an aryl, and/or alkylene-aryl.
  • R 1 represents an alkyl group such as ethyl or preferably n-propyl, or an alkylcycloalkyl group, such as cyclobutylmethyl. More preferably R 2 preferably is a lower carboxylic acid group, preferably an acetate group, and R 3 preferably is a cyclopropyl group.
  • the process according to the present invention further advantageously comprises a step b) of isolating the obtained compound I from the reaction mixture.
  • the compound remains in the reaction mixture, and the isocyanide compound is added to the mixture.
  • the aldehyde compound according to formula II is derived from a substituted 2-amino-1-ethanol according to general formula V:
  • the alcohol is enantiomerically substantially pure, since this allows accessing a large number of different stereoisomeric compounds from substituted alcohols, thus from relatively simple building blocks.
  • Compound II may advantageously be prepared from an substituted 2-amino-1-ethanol according to general formula V by A) N-formylation, and B) by a selective oxidation of the primary alcohol of the obtained N-formylatcd amino alcohol intermediate to an aldehyde.
  • Steps (A) and (B) may be performed by any suitable method known to a person skilled in the art.
  • step (B) includes a Dess-Martin oxidation of the alcohol to an aldehyde.
  • the oxidation is advantageously performed by employing a Dess-Martin oxidation.
  • a so-called Dess-Martin oxidation employs the Dess-Martin Periodinane (DMP), a hypervalent iodine compound for the selective and very mild oxidation of alcohols to aldehydes or ketones, as disclosed for instance in Y. Yip, F. Victor, J. Lamar, R. Johnson, Q. M. Wang, J. I. Glass, N. Yumibe, M. Wakulchik, J. Munroe, S.-H Chen, Bioorg. Med. Chem. Lett. 2004, 14, 5007-5011.
  • DMP Dess-Martin Periodinane
  • the oxidation preferably may be performed in dichloromethane, chloroform of THF at room temperature, and is usually complete within 0.5-2 hours. Products are easily separated from the iodine-containing by-products after basic work-up.
  • the combination of two reaction steps in one pot is advantageous in terms of both time and resources, since among other benefits less solvent and manpower are required due to the single workup stage, and since less separation steps by chromatography are required.
  • compound II is advantageously not isolated after step B), but the isocyanide component IV is added to the reaction mixture after the oxidation is complete.
  • the lower carboxylic acid preferably acetic acid released from the Dess-Martin Periodinane acts as component III, thereby resulting in a carbon efficient process with minimal handling and isolation issues.
  • the aldehyde compounds obtained can directly be converted with high selectivity to compound (I) as defined herein above, which is usually more stable than the aldehyde component, thereby increasing the overall yield.
  • the present invention also relates to a process including combining the Dess-Martin oxidation in one pot with the Passerini reaction to afford ⁇ -acyloxy- ⁇ -formamido amides (I) directly.
  • the process according to the present invention further advantageously comprises a step c) of subjecting compound I to dehydrating conditions to obtain an isocyanide compound according to general formula VI:
  • reaction step (c) usually performed in the presence of a base, typically a tertiary amine base such as triethylamine or N-methylmorpholine.
  • R 2 is a lower carboxylic acid, more preferably acetate.
  • R 1 is preferably is an alkyl group, such as n-propyul, or an alkylcycloalkyl group, preferably —CH 2 -cyclopropyl or —CH 2 -cyclobutyl.
  • R 3 is a cycloalkyl or hydrogen, or a protective group as usually employed to reversably protect primary amines.
  • R 1 , R 2 and R 3 are chosen such that the compound according to formula VI has a structure according to general formula VII:
  • R 1 , R 2 and R 3 are chosen such that the compound according to formula VI has a structure according to general formula VIII:
  • R 1 represents a lower carboxylic acid group, preferably acetate, and R 2 represents reversibly attached protective group.
  • the isocyanide compound VI can advantageously be employed in reaction processes such as Ugi or related multicomponent reactions that make use of isocyanide compounds in the convergent synthesis of complex structures, such a prolyl dipeptide structures.
  • the subject process further advantageously comprises reacting the compound according to formula IV with a compound having the general formula IX:
  • the (3R,7S)-diastereomers i.e. the diastereomers having the opposite configuration of the substituents R 4 can also be employed, yielding the equivalent (3R,7S)-configured proline derivatives XI.
  • both substituents R 5 represent hydrogen, and both substituents R 4 jointly form a substituted or unsubstituted 3-, 4-, 5- , 6-, 7- or 8 membered ring structure. More preferably, R 4 is chosen such that the compound according to formula I has the structure according to formula XII:
  • R 7 represents a structure according to general formula XV:
  • R a and R b each independently represents a hydrogen atom, a halogen atom, a lower alkyl group comprising from 1 to 4 carbon atoms, a lower alkyl group substituted by halogen, a cycloalkyl group, an aryl group, a lower alkoxy group, a lower thioalkyl group, a cycloalkyloxy group, an aralkyloxy group or an alkanoyl group; a hydroxyl group, a nitro group, a formyl group, an amino group which may be protected or substituted, a cycloalkyloxy, aralkyloxy, alkanoyl, ureido or mono-, di- or tricyclic heterocyclic group, all of which groups may optionally be substituted.
  • the compound according to formula XII the compound according to formula XII
  • compound XVII may advantageously be isolated from the reaction mixture.
  • the subject process further preferably comprises subjecting the compound according to formula XVII to a saponification reaction to remove the acetate from the secondary alcohol at the ⁇ -hydroxy- ⁇ -amino acid structure.
  • the saponification preferably is carried out by contacting the compound according to formula XVII with an alkaline metal carbonate, preferably K 2 CO 3 in a suitable solvent, to obtain a saponified alcohol product according to formula XVII a (not depicted here).
  • the subject invention also relates to compounds XVII and XVIIa.
  • This compound which is also known as Telaprevir, could be prepared in higher yields than any previously disclosed processes according to the process of the present invention.
  • the subject invention therefore also relates to a process wherein XIIa or XIIb are selectively prepared, and to the thus obtained compounds XXIa or XXIII, as well as to compounds XIIa or XIIb.
  • Suitable solvents for the subject reaction are polar protic and aprotic organic solvents, including methanol, ethanol, 2-propanol and other alcohol solvent, tetrahydrofuran, 1,4-dioxane, acetonitrile, and/or mixtures of these solvents with water or less polar organic solvents, such as dichloromethane or chloroform.
  • the saponification or removal of the ester group through hydrolysis may be performed by any suitable method known to a skilled person. Preferably, it is carried out by contacting the obtained reaction product according to formula I with an alkaline metal carbonate, more preferably K 2 CO 3 in a suitable solvent, to obtain a saponified alcohol product.
  • the saponified alcohol product may then advantageously be oxidised selectively at the secondary alcohol function, preferably without affecting the other structures on the compound, to yield a ketone compound.
  • the selective oxidation is preferably carried out by contacting the saponified alcohol product with a suitable oxidant in a suitable solvent.
  • suitable solvents include dichloromethane, THF, ethyl acetate, DMSO.
  • Suitable oxidants include hypervalent iodine reagents such as IBX, Dess-Martin periodinane, etc., or a combination of TEMPO and PhI(OAc) 2 or related reagents.
  • the present invention further advantageously also relates to all novel intermediates obtainable by the subject process, more preferably to compounds XIV and XIX prior to saponification, to the compounds having the saponified secondary alcohols, and to all novel intermediates and building blocks.
  • Aldehyde compound 1 (0.892 g, 6.91 mmol) was added to a solution of cyclopropyl isocyanide (0.410 g, 6.12 mmol) in CH 2 Cl 2 (110 ml) and stirred for 5 minutes at room temperature.
  • Acetic acid (0.711 ml, 0.747 g, 12.44 mmol) was added and the yellow reaction mixture was stirred for 3 days at room temperature.
  • the reaction mixture was washed twice with 100 ml saturated Na 2 CO 3 , followed by drying with Na 2 SO 4 and concentration in vacuo.
  • the crude was purified by silica gel flash chromatography (5% MeOH in CH 2 Cl 2 , 1% triethylamine).
  • N-methylmorpholine (0.57 ml, 0.562 g, 5.56 mmol) was added to a solution of (S)-1-(cyclopropylamino)-3-formamido-1-oxohexan-2-yl acetate (0.713 g, 2.78 mmol) in CH 2 Cl 2 (40 ml) at room temperature.
  • the reaction mixture was cooled to ⁇ 78° C. and triphosgene (0.289 g, 0.97 mmol) was quickly added and stirred for 5 minutes at this temperature.
  • the resulting yellow solution was warmed up to ⁇ 30° C. and was stirred for another 3 h. Subsequently, the reaction was quenched with water and extracted twice with CH 2 Cl 2 (40 ml).
  • Example 4 The Isocyanide obtained in Example 4 (0.549 g, 2.3 mmol) was dropwise added to a solution of (3S, &R) 3-azabicyclo-[3,3,0]oct-2-ene imine (0.252 g, 2.3 mmol) and (S)-24((S)-2-cyclohexyl-2-(pyrazine-2-carboxamido)acetamido)-3,3-dimethylbutanoic acid (0.602 g, 1.60 mmol) in CH 2 Cl 2 (5 ml) at room temperature. This yellow solution was stirred for 72 hours and afterwards diluted with 5 ml CH 2 Cl 2 .

Abstract

The present invention relates to a process for the preparation of a compound of the general Formula (I), comprising: a) reacting a compound of the general Formula (II) with a compound of the Formula III R2COOH and a compound of the general Formula IV R3NC under such conditions that compound I is formed, wherein R1 represents a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure, and R2 represents a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure, and R3 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl structure. In further aspect the subject invention relates to the use of the the obtained products as intermediates for various peptidomimetics, and preferably as a building block in a convergent synthesis of prolyl dipeptide structures.
Figure US20140213788A1-20140731-C00001

Description

    FIELD OF THE INVENTION
  • The present invention relates to α-acyloxy β-formamido amides, methods for their preparation, and their use as intermediate for the preparation of isocyanide building block for the preparation of prolyl peptide inhibitors of disease-associated targets.
  • BACKGROUND OF THE INVENTION
  • α-hydroxy-β-aminocarboxylic acid and amide derivatives are found in a variety of natural products and pharmaceutically active substances.
  • Subunits incorporating the α-hydroxy-β-aminocarboxylic acid motif have been termed “norstatine” derivatives, and serve as key intermediates for the synthesis of the general class of P1-α-ketocarboxylic transition-state inhibitors of serine or cysteine proteases. Such inhibitors are finding increasing applications in medicine for the treatment of a diverse array of disease states including thrombosis, cancer, and osteoporosis.
  • Towards this end, α-hydroxy-β-aminocarboxylic acid, ester and amide derivatives serve an important role as the most common precursors for the preparation of these α-hydroxy-β-aminocarboxylic acid -incorporating drug candidates.
  • Electrophilic α-dicarbonyl compounds are regarded as interesting and highly reactive functional arrays which are capable of undergoing a myriad of transformations.
  • Such chemical properties can be exploited in novel and therapeutically useful ways by strategically incorporating these reactive α-ketocarboxylic moieties into a peptidic or peptidomimetic matrix.
  • Multicomponent reactions (MCRs) such as the Passerini and Ugi reactions offer the ability to rapidly and efficiently generate collections of structurally and functionally diverse organic compounds. The Passerini reaction is a chemical reaction involving isocyanides, aldehydes or ketones, and carboxylic acids to form α-acyloxy amides. Compounds that are available through the Passerini reaction may form highly valuable building blocks in the convergent synthesis of compounds with medicinal effects, such as for instance the prolyl dipeptide inhibitors Telaprevir or Boceprevir.
  • WO2007/0022450 discloses for instance the preparation of a cyclopropylamide by the coupling of Cb-norvalinal with cyclopropyl isocyanide in the presence of trifluoroacetic acid. The obtained compound is then deprotected, and the aminoalcohol then employed in a synthesis of Telaprevir. However, the disclosed synthesis is cumbersome, and only allows for a limited yield and variation of the building blocks involved.
  • Accordingly, the access to such compound through a more selective and higher yielding route would be highly desirable.
  • SUMMARY OF THE INVENTION
  • The subject invention now provides for a synthesis of α-hydroxy-β-aminocarboxylic acid derivatives such as to α-acyloxy β-formamido amides that advantageously can be employed in multicomponent reactions (MCRs), such as Passerini and Ugi reactions, which allow convergent syntheses with high atom and step efficiency in good yield.
  • Accordingly, the present invention relates to a process for the preparation of a compound of the general formula I
  • Figure US20140213788A1-20140731-C00002
  • comprising:
      • a) reacting a compound of the general formula II:
  • Figure US20140213788A1-20140731-C00003
  • with a compound of the formula III:

  • R2—COOH   (III),
  • and a compound of the general formula IV

  • R3NC —(IV)
  • wherein R1 represents a hydrogen atom, a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, monocyclic, polycyclic or alkylcycloalkyl or a heterocyclic structure;
    R2 represents a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure; and
    R3 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl structure, or a protective group that can reversible be removed.
  • In a first aspect, the present invention provides novel methods for the synthesis of α-hydroxy-β-amino acid and amide derivatives according to formula I and intermediates thereto. These derivatives may be advantageously be employed as intermediates for synthesis of peptidyl α-ketoamides and α-hydroxy-β-amino carboxylic acid derivatives which are useful as inhibitors of certain proteases, including serine and cysteine proteases.
  • The process preferably involves reacting an N-terminally protected amino aldehyde with an isonitrile and a carboxylic acid to give an amino α-acyloxy carboxamide. The acyl group may then be removed to give the derivative, or may advantageously remain in position. Alternatively, the protecting group may removed and an acyl shift may advantageously take place. The reaction is performed under such conditions that compound I is formed.
  • The process according to present invention provides an improved synthetic route to intermediates for the end target compounds, with economy of synthesis, namely fewer synthetic steps, improved yields, less consumption of reagents and fewer side products than are obtained following conventional synthetic routes.
  • In the process according to the invention, R1 preferably represents a hydrogen, a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl preferably —CH2-cyclopropyl or —CH2-cyclobutyl, an aryl, alkylene-aryl, SO2-alkyl, SO2-aryl, alkylene-SO2-aryl, -alkylene-SO2-alkyl, heterocyclyl or alkylene-heterocyclyl; CH2CO—X—H, —CH2CO—X-straight chain alkyl, —CH2CO—X-branched chain alkyl, —CH2CO—X-cycloalkyl, —CH2CO—X-alkylene-cycloalkyl, —CH2CO—X-aryl, —CH2CO—X-alkylene-aryl, —CH2CO—X-heterocyclyl, —CH2CO—X-alkylene-heterocyclyl or —CH2CO-aryl; wherein X represents O, S or NH.
  • R2 preferably represents hydrogen, a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl, an aryl, and/or alkylene-aryl.
  • R3 preferably represents a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl, an aryl, and/or alkylene-aryl.
  • In a preferred embodiment of the subject invention, R1 represents an alkyl group such as ethyl or preferably n-propyl, or an alkylcycloalkyl group, such as cyclobutylmethyl. More preferably R2 preferably is a lower carboxylic acid group, preferably an acetate group, and R3 preferably is a cyclopropyl group.
  • The process according to the present invention further advantageously comprises a step b) of isolating the obtained compound I from the reaction mixture.
  • This may be done by any suitable method known to a skilled person, such as extraction, chromatographic separation, distillation, crystallization or otherwise suitable process or combinations thereof.
  • Alternatively, the compound remains in the reaction mixture, and the isocyanide compound is added to the mixture.
  • Preferably, the aldehyde compound according to formula II is derived from a substituted 2-amino-1-ethanol according to general formula V:
  • Figure US20140213788A1-20140731-C00004
  • Preferably, the alcohol is enantiomerically substantially pure, since this allows accessing a large number of different stereoisomeric compounds from substituted alcohols, thus from relatively simple building blocks.
  • Compound II may advantageously be prepared from an substituted 2-amino-1-ethanol according to general formula V by A) N-formylation, and B) by a selective oxidation of the primary alcohol of the obtained N-formylatcd amino alcohol intermediate to an aldehyde.
  • Steps (A) and (B) may be performed by any suitable method known to a person skilled in the art.
  • Preferably, step (B) includes a Dess-Martin oxidation of the alcohol to an aldehyde.
  • The oxidation is advantageously performed by employing a Dess-Martin oxidation. In this way, the stereogenic centre and various substituents R1 can be introduced from often commercially or synthetically readily available 2-aminoethanols. A so-called Dess-Martin oxidation employs the Dess-Martin Periodinane (DMP), a hypervalent iodine compound for the selective and very mild oxidation of alcohols to aldehydes or ketones, as disclosed for instance in Y. Yip, F. Victor, J. Lamar, R. Johnson, Q. M. Wang, J. I. Glass, N. Yumibe, M. Wakulchik, J. Munroe, S.-H Chen, Bioorg. Med. Chem. Lett. 2004, 14, 5007-5011.
  • The oxidation preferably may be performed in dichloromethane, chloroform of THF at room temperature, and is usually complete within 0.5-2 hours. Products are easily separated from the iodine-containing by-products after basic work-up.
  • Preferably, the Dess-Martin oxidation according to the invention is performed in the presence of compound IV, in such a way that the aldehyde II that is formed during the Dess-Martin oxidation immediately reacts in a Passerini reaction with the acetic acid that is formed as a by-product of the Dess-Martin oxidation as carboxylic acid III and isocyanide IV. This has the tremendous benefit that the atomic efficiency of the reaction is increased, since the Dess-Martin Periodinane (DMP) also provides a reactant for the second stage of the reaction, i.e., the Passerini three-component reaction. In addition, the combination of two reaction steps in one pot is advantageous in terms of both time and resources, since among other benefits less solvent and manpower are required due to the single workup stage, and since less separation steps by chromatography are required. Accordingly, compound II is advantageously not isolated after step B), but the isocyanide component IV is added to the reaction mixture after the oxidation is complete. In this case, the lower carboxylic acid, preferably acetic acid released from the Dess-Martin Periodinane acts as component III, thereby resulting in a carbon efficient process with minimal handling and isolation issues. Moreover, the aldehyde compounds obtained can directly be converted with high selectivity to compound (I) as defined herein above, which is usually more stable than the aldehyde component, thereby increasing the overall yield. Accordingly the present invention also relates to a process including combining the Dess-Martin oxidation in one pot with the Passerini reaction to afford α-acyloxy-β-formamido amides (I) directly.
  • The process according to the present invention further advantageously comprises a step c) of subjecting compound I to dehydrating conditions to obtain an isocyanide compound according to general formula VI:
  • Figure US20140213788A1-20140731-C00005
      • wherein R1, R2 and R3 are as defined herein above.
  • This may advantageously be achieved for instance by treatment of the formamido compound (I) with phosgene, diphosgene(trichloromethylchloroformate), triphosgene [bis(trichloromethyl) carbonate], and/or POCl3. The reaction step (c) usually performed in the presence of a base, typically a tertiary amine base such as triethylamine or N-methylmorpholine.
  • Preferably, therefore, R2 is a lower carboxylic acid, more preferably acetate.
  • In a preferred embodiment of the subject process, R1 is preferably is an alkyl group, such as n-propyul, or an alkylcycloalkyl group, preferably —CH2-cyclopropyl or —CH2-cyclobutyl.
  • In a further preferred embodiment of the subject process, R3 is a cycloalkyl or hydrogen, or a protective group as usually employed to reversably protect primary amines.
  • In yet a further preferred embodiment of the subject process, R1, R2 and R3 are chosen such that the compound according to formula VI has a structure according to general formula VII:
  • Figure US20140213788A1-20140731-C00006
  • In yet a further preferred embodiment of the subject process, R1, R2 and R3 are chosen such that the compound according to formula VI has a structure according to general formula VIII:
  • Figure US20140213788A1-20140731-C00007
  • wherein R1 represents a lower carboxylic acid group, preferably acetate, and R2 represents reversibly attached protective group.
  • The isocyanide compound VI can advantageously be employed in reaction processes such as Ugi or related multicomponent reactions that make use of isocyanide compounds in the convergent synthesis of complex structures, such a prolyl dipeptide structures.
  • Accordingly, the subject process further advantageously comprises reacting the compound according to formula IV with a compound having the general formula IX:
  • Figure US20140213788A1-20140731-C00008
  • or the respective diastereomers, and
    a compound of the general formula X:

  • R7—COOH(X),
  • to obtain a compound according to general formula XI or its respective diastereomers
  • Figure US20140213788A1-20140731-C00009
  • wherein R4 represents each independently, or jointly a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure, and
    • R5 represents represents each independently a hydrogen atom, a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure,
    • R6 represents the structure derived from compound I wherein R1, R2 and R3 are defined herein above, and
    • R7 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl, or an aromatic or non-aromatic aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure, and R7 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl, or an aromatic or non-aromatic aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure, under conditions that compound XI is formed.
  • In the case of R5 being different from hydrogen, the diastereomers of compound IX referred to above include the following compounds of general formula IXa and IXb, respectively:
  • Figure US20140213788A1-20140731-C00010
  • resulting predominantly in the compounds of general formula XIa and XIb, respectively:
  • Figure US20140213788A1-20140731-C00011
  • The (3R,7S)-diastereomers, i.e. the diastereomers having the opposite configuration of the substituents R4 can also be employed, yielding the equivalent (3R,7S)-configured proline derivatives XI.
  • Preferably, both substituents R5 represent hydrogen, and both substituents R4 jointly form a substituted or unsubstituted 3-, 4-, 5- , 6-, 7- or 8 membered ring structure. More preferably, R4 is chosen such that the compound according to formula I has the structure according to formula XII:
  • Figure US20140213788A1-20140731-C00012
  • according to formula XIII:
  • Figure US20140213788A1-20140731-C00013
  • or according to formula XIV:
  • Figure US20140213788A1-20140731-C00014
  • Preferably, R7 represents a structure according to general formula XV:
  • Figure US20140213788A1-20140731-C00015
  • wherein Ra and Rb each independently represents a hydrogen atom, a halogen atom, a lower alkyl group comprising from 1 to 4 carbon atoms, a lower alkyl group substituted by halogen, a cycloalkyl group, an aryl group, a lower alkoxy group, a lower thioalkyl group, a cycloalkyloxy group, an aralkyloxy group or an alkanoyl group; a hydroxyl group, a nitro group, a formyl group, an amino group which may be protected or substituted, a cycloalkyloxy, aralkyloxy, alkanoyl, ureido or mono-, di- or tricyclic heterocyclic group, all of which groups may optionally be substituted. In a preferred embodiment of the subject process, the compound according to formula XII
  • Figure US20140213788A1-20140731-C00016
  • is reacted with a compound according to general formula XVI:
  • Figure US20140213788A1-20140731-C00017
  • and a compound according to general formula VII as defined herein above to obtain a compound according to formula XVII:
  • Figure US20140213788A1-20140731-C00018
  • After the reaction, compound XVII may advantageously be isolated from the reaction mixture.
  • The subject process further preferably comprises subjecting the compound according to formula XVII to a saponification reaction to remove the acetate from the secondary alcohol at the α-hydroxy-β-amino acid structure. The saponification preferably is carried out by contacting the compound according to formula XVII with an alkaline metal carbonate, preferably K2CO3 in a suitable solvent, to obtain a saponified alcohol product according to formula XVII a (not depicted here). The subject invention also relates to compounds XVII and XVIIa.
  • The released intermediate compound XVIIa comprising the secondary alcohol is then subjected to a selective oxidation to a ketone to form compound XVIII,
  • Figure US20140213788A1-20140731-C00019
  • This compound, which is also known as Telaprevir, could be prepared in higher yields than any previously disclosed processes according to the process of the present invention.
  • In a further preferred embodiment of the subject process, a compound according to general formula XVIII above is reacted with an acid compound according to general formula XIX:
  • Figure US20140213788A1-20140731-C00020
  • and an isocyanate compound according to the present invention according to general formula XXI:
  • Figure US20140213788A1-20140731-C00021
  • This reaction will result in compound XXI,
  • Figure US20140213788A1-20140731-C00022
  • which may advantageously be saponified to a secondary alcohol and subsequently oxidized to a ketone, thereby yielding, after removal under suitable conditions of the R2 group, a compound according to formula XXIII:
  • Figure US20140213788A1-20140731-C00023
  • also known as Boceprevir.
  • The process according to the present invention advantageously permits to selectively produce the two diastereomers according to the general formula XXIIa:
  • Figure US20140213788A1-20140731-C00024
  • and according to the general formula XXIIb, respectively,
  • Figure US20140213788A1-20140731-C00025
  • The subject invention therefore also relates to a process wherein XIIa or XIIb are selectively prepared, and to the thus obtained compounds XXIa or XXIII, as well as to compounds XIIa or XIIb.
  • Suitable solvents for the subject reaction are polar protic and aprotic organic solvents, including methanol, ethanol, 2-propanol and other alcohol solvent, tetrahydrofuran, 1,4-dioxane, acetonitrile, and/or mixtures of these solvents with water or less polar organic solvents, such as dichloromethane or chloroform.
  • The saponification or removal of the ester group through hydrolysis may be performed by any suitable method known to a skilled person. Preferably, it is carried out by contacting the obtained reaction product according to formula I with an alkaline metal carbonate, more preferably K2CO3 in a suitable solvent, to obtain a saponified alcohol product. The saponified alcohol product may then advantageously be oxidised selectively at the secondary alcohol function, preferably without affecting the other structures on the compound, to yield a ketone compound.
  • The selective oxidation is preferably carried out by contacting the saponified alcohol product with a suitable oxidant in a suitable solvent. Suitable solvents include dichloromethane, THF, ethyl acetate, DMSO. Suitable oxidants include hypervalent iodine reagents such as IBX, Dess-Martin periodinane, etc., or a combination of TEMPO and PhI(OAc)2 or related reagents.
  • The present invention further advantageously also relates to all novel intermediates obtainable by the subject process, more preferably to compounds XIV and XIX prior to saponification, to the compounds having the saponified secondary alcohols, and to all novel intermediates and building blocks.
  • Experimental Part EXAMPLE 1 Synthesis of (S)-2-formamidopentanal (1)
  • Figure US20140213788A1-20140731-C00026
  • Compound (1) and its dimeric form
  • Dess-Martin periodinane (5.514 g, 13 mmol) was added to a solution of (S)-2-formamido-1-pentanol (1.31 g, 10 mmol) in CH2Cl2 (100 ml) at room temperature.
  • The white suspension was stirred for 2 days and subsequently 35 ml MeOH was added and stirred for 30 minutes. The resulting suspension was filtrated and the filtrate was concentrated in vacuo. The crude product was purified by silica gel flash chromatography (cHex:EtOAc=1:4) to give compound 1 (1.08 g, 8.29 mmol, 83%) as a white solid. NMR analysis indicates that compound 1 is in equilibrium with its cyclic dimmer, which was found to form a mixture of diastereomers.
  • [α]D 200=+37.6 (c=0.745, CHCl3); 1H NMR assigned to the monomer (250.13 MHz, CDCl3): δ=8.22 (s, 1H), 7.84 (s, 1H), 7.10 (in, 1H), 5.31 (m, 1H), 1.52 (m, 4H), 0.95 (m, 3H); 13C NMR assigned to the monomer (100.61 MHz, CDCl3): 198.8 (CH), 161.7 (CH), 57.4 (CH), 30.8 (CH2), 18.4 (CH2), 13.7 (CH3); 1HNMR assigned to the dimer (400.13 MHz, CDCl3) 8.22 (s, 2H), 5.26 (m, 2H), 3.72 (m, 2H) 1.52 (m, 8H), 0.95 (m, 6H;) 13C NMR (100.61 MHz, CDCl3) assigned to the dimer: 161.7 (CH), 89.8 (CH), 63.1 (CH), 30.8 (CH2), 18.4 (CH2), 13.7 (CH3); IR (neat): vmax (cm−1): 3325 (s), 2959 (s), 1649 (s), 1530 (s), 1381 (m), 1123 (w); HRMS (ESI, 4500 V): m/z calc. for C6H12NO2 + ([M+H]30 ) 130.0863, found 130.0858.
  • EXAMPLE 2 Synthesis from Compound 1 as Obtained in Example 1
  • Figure US20140213788A1-20140731-C00027
  • (3S)-2-acetoxy-N-cyclopropyl-3-formamidohexanoyl amide (3).
  • Aldehyde compound 1 (0.892 g, 6.91 mmol) was added to a solution of cyclopropyl isocyanide (0.410 g, 6.12 mmol) in CH2Cl2 (110 ml) and stirred for 5 minutes at room temperature. Acetic acid (0.711 ml, 0.747 g, 12.44 mmol) was added and the yellow reaction mixture was stirred for 3 days at room temperature. The reaction mixture was washed twice with 100 ml saturated Na2CO3, followed by drying with Na2SO4 and concentration in vacuo. The crude was purified by silica gel flash chromatography (5% MeOH in CH2Cl2, 1% triethylamine). (3S)-2-acetoxy-N-cyclopropyl-3-formamidohexanoyl amide (0.99 g, 3.87 mmol, 56%) was obtained as a white solid as a 78:22 mixture of diastereomers.
  • EXAMPLE 3 In Situ-Preparation of (38)-2-acetoxy-N-cyclopropyl-3-formamido-hexanoyl amide (3) without Isolation of the Compound Obtained in Example 1
  • Dess-Martin periodinane (5.66 g, 12.3 mmol) was added to a solution of (S)-N-(1hydroxypentan-2-yl)formamide (1.15 g, 8.8 mmol) in CH2Cl2 (12 ml) at room temperature. The white suspension was stirred for 60 minutes and subsequently cyclopropyl isocyanide (0.74 g, 10.0 mmol) was added and stirred for 48 hours. The resulting suspension was filtrated and washed twice with 10 ml saturated Na2CO3, followed by drying with Na2SO4 and concentration in vacuo. The crude product was purified by silica gel flash chromatography (5% MeOH in CH2Cl2, 1% triethylamine) to give compound 3 (1.34 g, 5.22 mmol, 60%) as a pale yellow solid as a 78:22 mixture of diastereomers.
  • 1H NMR (130° C., 400.13 MHz, DMSO-d6): δ=8.03 (s, 1H), 7.52 (m, 1H), 7.30 (m, 1H), 4.89 (d, J=4.4, 1H), 4.28 (m, 1H), 2.65 (m, 1H), 2.17(s, 3H), 1.27-1.47 (m, 4H), 0.89 (t, J=7.2, 3H), 0.63 (m, 2H), 0.48 (m, 2H); 13C NMR (125.78 MHz, DMSO-d6): δ=169.8 (C), 168.5 (C), 160.6 (CH), 74.4 (CH), 47.5 (CH), 22.2 (CH), 18.4 (CH3), 13.6 (CH3), 5.7 (CH2); IR (neat): vmax (cm−1) 3283 (s), 2961 (w), 1744 (m), 1661 (s), 1530 (s), 1238 (s); HRMS (ESI, 4500 V): m/z calcd. for C12H20N2O4Na+ ([M+Na]+) 279.1315, found 279.1325.
  • EXAMPLE 4 Preparation of (3S)-2-acetoxy-N-cyclopropyl-3-isocyano-hexanoyl amide (4)
  • Figure US20140213788A1-20140731-C00028
  • (3S)-2-acetoxy-N-cyclopropyl-3-isocyano-hexanoyl amide (4)
  • N-methylmorpholine (0.57 ml, 0.562 g, 5.56 mmol) was added to a solution of (S)-1-(cyclopropylamino)-3-formamido-1-oxohexan-2-yl acetate (0.713 g, 2.78 mmol) in CH2Cl2 (40 ml) at room temperature. The reaction mixture was cooled to −78° C. and triphosgene (0.289 g, 0.97 mmol) was quickly added and stirred for 5 minutes at this temperature. The resulting yellow solution was warmed up to −30° C. and was stirred for another 3 h. Subsequently, the reaction was quenched with water and extracted twice with CH2Cl2 (40 ml). The organic layers were collected, dried with Na2SO4 and concentrated in vacuo. The crude product was purified by silica gel flash chromatography (2% MeOH in CH2Cl2) to give 4 (0.578 g, 2.42 mmol, 87%) as a white solid.
  • 1H NMR (250.13 MHz, CDCl3): δ=6.28 (s, 1H), 5.25 (d, J=2.5 Hz, 1H), 4.2 (m, 1H), 2.74 (m, 1H), 2.24 (s, 3H), 1.55 (m, 4H), 0.96 (m, 3H), 0.84 (m, 2H), 0.60 (m, 2H); 13C NMR (62.90 MHz, CDCl3): δ=169.7 (C), 168.3 (C), 74.4 (CH), 47.5 (CH), 22.0 (CH), 20.6 (CH3), 18.5 (CH2), 13.5 (CH3), 5.5 (CH2); IR (neat): vmax (cm−1): 3267 (s), 2959 (m), 1745 (m), 1643 (s), 1512 (m), 1221 (s); HRMS (ESI, 4500 V): m/z calcd. for C12H18N2O3Na+([M+Na]+) 261.1210, found 261.1214.
  • EXAMPLE 5
  • Figure US20140213788A1-20140731-C00029
  • General Structure of the compound obtained in Example 5.
  • The Isocyanide obtained in Example 4 (0.549 g, 2.3 mmol) was dropwise added to a solution of (3S, &R) 3-azabicyclo-[3,3,0]oct-2-ene imine (0.252 g, 2.3 mmol) and (S)-24((S)-2-cyclohexyl-2-(pyrazine-2-carboxamido)acetamido)-3,3-dimethylbutanoic acid (0.602 g, 1.60 mmol) in CH2Cl2 (5 ml) at room temperature. This yellow solution was stirred for 72 hours and afterwards diluted with 5 ml CH2Cl2. The reaction mixture was washed twice with saturated Na2CO3 solution (10 ml) and twice with saturated NH4Cl. The organic layers were collected, dried with MgSO4 and concentrated in vacuo. The crude product was purified by silica gel flash chromatography (5% MeOH in CH2Cl2) to give 5 (0.876 g, 1.21 mmol, 76%) as a mixture of diastereomers.
  • 1H NMR (500.23 MHz, CDCl3): δ=9.50 (s, 1H), 8.75 (d, J=2.5, 1H), 8.59 (s, 1H), 8.35 (d, J=9.0, 1H), 6.84 (d, J=9.0, 1H), 6.44 (s, 1H), 5.20 (d, J=3.0, 1H), 4.74 (d, J=9.5, 1H), 4.58 (t, J=7.5, 1H), 4.38 (m, 1H), 3.37 (d, J=6.0, 1H), 2.82 (m, 1H), 2.69 (m, 1H), 2.11 (s, 3H), 1.26 (s, 2H), 0.97 (s, 9H), 0.86 (m, 3H), 0.84-2.00 (m, 21H), 0.76 (m, 2H), 0.51 (in, 2H); 13C NMR (125.78 MHz, CDCl3): δ=170.5 (C), 169.3 (C), 162.9 (C), 147.4 (CH), 144.6 (CH), 144.2 (C), 142.8 (CH), 74.4 (CH), 66.6 (CH), 58.3 (CH), 56.6 (CH), 54.5 (CH2), 44.9 (CH), 43.0 (CH), 41.3 (CH), 35.5 (C), 26.4 (CH3), 20.8 (CH3), 19.1 (CH2), 13.8 (CH3), 6.6 (CH2); vmax (cm−1): 3306 (m), 2928 (m), 2931 (m), 1743 (w), 1655 (s), 1520 (m), 1219 (m); HRMS (ESI, 4500 V): m/z calcd. for C38H57N7O7Na+ ([M+Na]+) 746.4212, found 746.4107.
  • EXAMPLE 6
  • Figure US20140213788A1-20140731-C00030
  • Telaprevir (Example 6)
  • 250 μl of saturated K2CO3 was added to a solution of the compound obtained in Example 5 (0.514 g, 0.75 mmol) in MeOH (20 ml) at room temperature. The reaction mixture was stirred for 30 minutes at room temperature resulting in a pale yellow suspension. After full conversion (as judged by TLC analysis), the reaction mixture was washed with 20 ml brine, the aqueous layer was washed again with 10 ml CH2Cl2 (2×). The organic layers were collected, dried with MgSO4 and concentrated in vacuo, to yield a pale yellow solid. The yellow solid was dissolved in CH2Cl2 (10 ml) and Dess-Martin periodinane (0.650 g, 1.532 mmol) was added at room temperature. The reaction mixture was stirred overnight before adding saturated NaHCO3 solution (10 ml) and saturated Na2S2O3 solution (10 ml). This mixture was stirred for 10 minutes, separated and the aqueous layers were washed with EtOAc (2×10 ml). The organic layers were collected, dried with MgSO4 and concentrated in vacuo to give the crude product as an 83:13:4 mixture of diastereomers. After silica gel flash chromatography (1% MeOH in CH2Cl2), 5 (0.412 mg, 0.61 mmol, 80%) was obtained as a white solid. 1H NMR (500.23 MHz, DMSO-d6): δ=9.19 (d, J=1.4 Hz, 1H), 8.91 (d, J=24.5 Hz, 1H), 8.76 (dd, J=1.5, 2.5 Hz, 1H), 8.71 (d, J=5.3 Hz, 1H), 8.49 (d, J=9.2 Hz, 1H), 8.25 (d, J=6.8 Hz, 1H), 8.21 (d, J=8.9 Hz, 1H), 4.94 (in, 1H), 4.68 (dd, J=6.5, 9.0 Hz, 1H), 4.53 (d, J=9.0 Hz, 1H), 4.27 (d, J=3.5 Hz, 1H), 3.74 (dd, J=8.0, 10 Hz, 1H), 2.74 (m, 1H), 3.64 (d, J=3.5 Hz, 1H), 0.92 (s, 9H), 0.87 (t, 3H), 0.84-1.40 (m, 23H), 0.65 (m, 2H), 0.56 (m, 2H); 13C NMR (125.78 MHz, CDCl3): δ=197.0 (C), 171.8 (C), 170.4 (C), 169.0 (C), 162.1 (C), 161.9 (C), 147.9 (CH), 144.0 (C), 143.4 (CH), 56.4 (CH), 56.3 (CH), 54.2 (CH), 53.4 (CH), 42.3 (CH), 41.3 (CH), 32.1 (CH), 31.8 (CH), 31.6 (CH), 29.1 (CH), 28.0 (CH), 26.4 (CH3); Vmax (cm−1): 3302 (m), 2928 (m), 2858 (w), 1658 (s), 1620 (s), 1561 (s), 1442 (m); HRMS (ESI, 4500 V): m/z calcd. for C36H53N7O6Na+ ([M+Na]+) 702.3950, found 702.3941.

Claims (23)

1-23. (canceled)
24. A compound of formula VI:
Figure US20140213788A1-20140731-C00031
wherein R1 represents a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tri-cyclic, or heterocyclic group,
R2 represents a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tri-cyclic, or heterocyclic group, and
R3 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl group, or a reversibly attached protective group.
25. The compound according to claim 24 having a structure of formula VII:
Figure US20140213788A1-20140731-C00032
26. The compound according to claim 24 having a structure of formula VIII:
Figure US20140213788A1-20140731-C00033
wherein R1 represents a lower carboxylic acid group, and
R2 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl group, or a protective group that can be reversibly removed.
27. A process for preparing a compound of formula VI of claim 24, comprising:
a) reacting a compound of formula II:
Figure US20140213788A1-20140731-C00034
with a compound of formula III:

R2—COON   (III),
and a compound of formula IV:

R3—NC   (IV)
under such conditions that a compound of formula I is formed,
Figure US20140213788A1-20140731-C00035
b) isolating the compound of formula I from the reaction mixture, and
c) subjecting the compound of formula I obtained in b) to dehydrating conditions to obtain a compound of formula VI.
28. The process according to claim 27, wherein c) is performed by treatment of the formamido compound (I) with phosgene, diphosgene (trichloromethyl chloroformate), triphosgene [bis(trichloromethyl)carbonate], and/or POCl3.
29. The process according to claim 28, wherein c) is performed in the presence of a base, preferably a tertiary amine base such as triethylamine or N-methylmorpholine.
30. The process according to claim 27, wherein R1 is an alkyl group, such as n-propyl, or an alkylcycloalkyl group, preferably —CH2-cyclopropyl or —CH2-cyclobutyl.
31. The process according to claim 27, wherein R2 represents hydrogen, a straight chain alkyl, a branched chain alkyl, a cycloalkyl, an alkylene-cycloalkyl, an aryl or alkylene aryl.
32. The process according to claim 27, wherein, R3 is a cycloalkyl or hydrogen, or a protective group as usually employed to reversably protect primary amines.
33. The process according to claim 27, wherein, R1, R2 and R3 are chosen such that the compound of formula VI has a structure according to formula VII:
Figure US20140213788A1-20140731-C00036
34. The process according to claim 27, wherein R1, R2 and R3 are chosen such that the compound of formula VI has a structure according to formula VIII:
Figure US20140213788A1-20140731-C00037
wherein R1 represents a lower carboxylic acid group, preferably acetate, and
R2 represents reversibly attached protective group.
35. The process according to claim 27, comprising reacting the compound of formula VI with a compound of formula IX:
Figure US20140213788A1-20140731-C00038
or the respective diastereomers, and a compound of formula X:

R7—COON   (X),
under conditions that a compound of formula XI is formed, to obtain a compound of formula XI or its respective diastereomers:
Figure US20140213788A1-20140731-C00039
wherein R4 represents each independently, or jointly a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tricyclic, or heterocyclic structure, and
R5 represents each independently a hydrogen atom, a substituted or unsubstituted alkyl, alkenyl, alkynyl, aromatic or non-aromatic, mono-, di- or tri-cyclic, or heterocyclic structure,
R6 represents a structure derived from a compound of formula I, and
R7 represents a substituted or unsubstituted alkyl, alkenyl, or alkynyl, or an aromatic or non-aromatic aromatic or non-aromatic, mono-, di- or tri-cyclic, or heterocyclic structure.
36. The process according to claim 35, wherein in the case of R5 being different from hydrogen, the diastereomers of formula IX include compounds of formulae IXa and IXb, respectively:
Figure US20140213788A1-20140731-C00040
resulting predominantly in the compounds of formulae XIa and XIb, respectively:
Figure US20140213788A1-20140731-C00041
37. The process according to claim 36, wherein both substituents R5 represent hydrogen, and both substituents R4 jointly form a substituted or unsubstituted 3-, 4-, 5- , 6-, 7- or 8-membered ring structure.
38. The process according to claim 37, wherein R4 is chosen such that the compound of formula I has the structure according to formula XII:
Figure US20140213788A1-20140731-C00042
according to formula XIII:
Figure US20140213788A1-20140731-C00043
or according to formula XIV:
Figure US20140213788A1-20140731-C00044
39. The process according to claim 35, wherein R7 represents a structure according to formula XV:
Figure US20140213788A1-20140731-C00045
wherein Ra and Rb each independently represents a hydrogen atom, a halogen atom, a lower alkyl group comprising from 1 to 4 carbon atoms, a lower alkyl group substituted by halogen, a cycloalkyl group, an aryl group, a lower alkoxy group, a lower thioalkyl group, a cycloalkyloxy group, an aralkyloxy group or an alkanoyl group; a hydroxyl group, a nitro group, a formyl group, an amino group which may be protected or substituted, a cycloalkyloxy, aralkyloxy, alkanoyl, ureido or mono-, di- or tricyclic heterocyclic group, all of which groups may optionally be substituted.
40. The process according to claim 39, wherein a compound of formula XII
Figure US20140213788A1-20140731-C00046
is reacted with a compound of formula XVI:
Figure US20140213788A1-20140731-C00047
and a compound of formula VII to obtain a compound of formula XVII:
Figure US20140213788A1-20140731-C00048
41. The process according to claim 40, further comprising isolating a compound of formula XVII from the reaction mixture.
42. The process according to claim 40, further comprising subjecting the compound of formula XVII to a saponification reaction to remove the acetate from the secondary alcohol at the α-hydroxy-β-amino acid structure.
43. The process according to claim 42, wherein the saponification is carried out by contacting the compound of formula XVII with an alkaline metal carbonate, preferably K2CO3 in a suitable solvent, to obtain a saponified secondary alcohol product.
44. The process according to claim 42, subjecting the compound of formula XVIIa comprising the secondary alcohol to a selective oxidation to a ketone to form a compound of formula XVIII.
Figure US20140213788A1-20140731-C00049
45. The compound of formula XVII or XXI:
Figure US20140213788A1-20140731-C00050
wherein R1 is acetate, and R2 is a substituted or unsubstituted alkyl, alkenyl, or alkynyl group, or a protective group that can be reversibly removed.
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