US20070014672A1

US20070014672A1 - Digital incremental flow analysis system

Info

Publication number: US20070014672A1
Application number: US11/488,571
Authority: US
Inventors: Ronald Genova; David Bach
Original assignee: Genova Ronald R; Bach David T
Current assignee: Scientific Products and Systems Inc
Priority date: 2005-07-18
Filing date: 2006-07-18
Publication date: 2007-01-18

Abstract

A positive displacement pump design that allows optical analysis of the fluids being pumped, mixed or sorted, via optical detection within the pump itself. Various embodiments of the device are disclosed, one employing a glass rod as a piston that gives the ability to convey optical light into the pump cylinder and collect light back out. Another employs a piston rod that encapsulates one or more optical fibers coupled to a gradient index lens at the distal end of the piston rod. A third embodiment comprises an optical fiber that serves directly as a piston actuator rod inserted through the capillary channel of a ceramic ferrule that slidably seats and aligns the optical fiber/piston actuator rod. In all embodiments the pump and detection system can be controlled and synchronized by a microprocessor, and optical detection can be based on fluorescence, scattered light, absorbance, or both.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS

The present application derives priority from U.S. Provisional Patent Application No. 60/699,644 filed: 18 Jul. 2005.

BACKGROUND OF THE INVENTION

1. Field of the Invention
The present invention relates to flow analysis in pumps and, in more particularly, to an optical analysis system for digital incremental flow analysis in positive displacement pumps.
2. Description of the Background
Conventional positive displacement pumps pump liquids in and out of a pumping chamber by changing the volume of the chamber and controlling the valving of at least one inlet and one outlet port.
For example, U.S. Pat. No. 6,739,478 to Bach et al. issued May 25, 2004 shows a precision fluid dispensing system with a two-piece positive displacement pump and a precision closed loop controller drive system that addresses the small volume precision dispensing requirements of bioscience applications. A micro-controller with closed loop feedback provides exact linear positioning and motion of the pump piston as well as optional control of a nozzle to provide exact micro-dispensing of fluids. Similarly, U.S. Patent Application 2005036692 by Bach further describes a two piston, two cylinder pump that can have multiple inlet and outlet ports on either diameter. These multiple port dual diameter pumps can have ports for dispensing a common fluid through several outlet ports or can be used to bring different reagents into the pump though multiple inlet ports. The use of different inlet ports for sequential reagent input to the pump allows for pump mixing of reagents and the dispensing of a common mixed solution.
The conventional displacement (pumping) range for the above-described and other positive displacement pumps is approximately 500 ml to 5 ul, or smaller volumes if coupled to an active nozzle as described in patent U.S. Pat. No. 6,739,478. Smaller precision fluid pumps can be accomplished by using small piston and cylinders coupled to a magnetostrictive, piezoelectric or solenoid actuator. Magnetostrictive fluid pumps rely on expanding rods that serve as actuators. The rods are made of magnetostrictive material that changes dimensions in the presence of a magnetic field. Thus, the rods move in and out of a pumping chamber like a solenoid, thereby changing the volume of the chamber. The rods may be moved within a range of several tens of microns. There are no moving parts at all, and so magnetostrictive pumps can run reliably over a long period of time. For example, U.S. patent application Ser. No. 11/273,583 by Bach et al. employs magnetostrictive actuator(s) to accomplish the functions of precision fluid dispensing, reagent mixing, and microarray dispensing. U.S. patent application Ser. No. 10/688,331 by Bach et al. shows a magnetostrictive actuator valve used for removing small volumes of fluid or fluid containing cells in a flowing stream or incremental flowing stream.
There is a large demand for cost effective cell sorting of stem and other cell types. Sorted isolated cell populations are used for transplantation into myeloablated cancer patients. There are currently about 100,000 such transplantations a year in the US. Automated cell sorting techniques are becoming indispensable for both research and clinical applications. These devices detect the properties of cells, and implement the physical separation of cells of interest at high speed. The detection of cells are done using optical techniques such as fluorescence and light scattering, but the optics are typically interfaced to a sample chamber downstream of the pump, followed by separation of the cells of interest using electrostatic or other physical separation methods. The sample chamber and sorting relies on an open fluid flow system that creates a high potential for contamination.
It would be greatly advantageous to provide a positive displacement pump design that allows for precision dispensing and mixing of fluids by assist of an optical system that interfaces directly with the pump itself and a precision closed loop controller drive system that addresses the small volume precision dispensing requirements of bioscience applications. Such a system would allow closure of the fluid flow system, reduces moving parts, and reduces the potential for contamination

SUMMARY OF THE INVENTION

Accordingly, it is an object of the present invention to provide a positive displacement pump design for precision dispensing and mixing of fluids by assist of an optical system that interfaces the pump chamber directly to a precision closed loop controller drive system (utilizing feedback) for optical analysis thereof, especially for small volume precision dispensing requirements of bioscience applications.
It is another object to provide a positive displacement pump design with direct optical analysis of the pump chamber which is nevertheless a closed fluid flow system, with few moving parts, and reduced potential for contamination
It is another object to provide a positive displacement pump design as described above that has particular utility in bioscience applications such as a cell sorter.
According to the present invention, the above-described and other objects are accomplished by providing a positive displacement pump design that allows an optical analysis of the fluids being pumped, mixed or sorted, via optical detection within the pump itself as opposed to downstream there from. According to an embodiment of the present invention, the pump incorporates a glass rod as a piston that gives the ability to convey optical light into the pump cylinder and collect light back out of the piston to optical detectors. As an alternative to a glass piston, a positive displacement rod may encapsulate one or more optical fibers coupled to a gradient index lens at the distal end of the piston rid. A gradient index lens employs a gradually varying index of refraction within the lens material itself, allowing light rays to be redirected towards a point of focus. Thus, for example, a GRIN lens such as an EndoGRIN™ or Selfoc™ lens may be carried at the distal end of the piston rod and optically coupled directly to an optical fiber embedded in the positive displacement piston (or the optical fiber or bundle may itself serve as the pump piston). The gradient index lens serves as the optical focusing element and allows optical interrogation within the chamber of the positive displacement pump. The incorporation of optical detection within the confines of a positive displacement pump chamber has great utility, especially as the internal analysis volume decreases. For example, pistons in accordance with the present invention allow the detection in the pump to approach femto-liter volumes. The pump and detection system can be controlled and synchronized by a microprocessor. Optical detection can be based on fluorescence, scattered light or both. Other detection techniques such as absorbance are also included in this application.
It is also understood that the use of a piston and cylinder incorporating optical detection in accordance with the invention can be used as a Precision Dispensing (or “Pick and Place”) type of pump.

BRIEF DESCRIPTION OF THE DRAWINGS

Other objects, features, and advantages of the present invention will become more apparent from the following detailed description of the preferred embodiment and certain modifications thereof when taken together with the accompanying drawings in which:
FIG. 1 shows a preferred embodiment of a positive displacement pump 2 with pump-integrated optical analysis system according to a first embodiment of the invention.
FIG. 2 shows a dual-diameter positive displacement pump 120 with pump-integrated optical analysis system according to an alternate embodiment of the invention.
FIG. 3 shows a positive displacement pump 220 with pump-integrated optical analysis system according to another embodiment of the invention for small volume precision dispensing requirements of bioscience applications.
FIG. 4(A-C) is a sequential view of a ‘pick and place” precision fluid pump with pump-integrated optical analysis system according to another alternate embodiment of the invention, while FIG. 4D illustrates an enlarged cross-section of the pick and place pump.

DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS

The present invention is a positive displacement pump mechanism that allows for precision dispensing and mixing of fluids by an optical system coupled directly to the pump chamber for small volume precision dispensing requirements of bioscience and other applications. The novel concept of the present invention is a positive displacement pump having an optically-transmissive piston coupled to an optical system including an optical detector and light source, at least the detector being connected to a closed loop controller drive system (e.g., a “pump integrated optical analysis system”). In general operation, the light source emits light that is transmitted through the transmissive piston, which transmits the light into an analysis section within the confines of the pump chamber. The light may be reflected back from the analysis section back through the piston to the detector for sensing, or alternatively through the pump chamber to a detector mounted opposite the piston on the interior cylinder head. Either way, any optical change in the analysis region can be observed via the reflected light and used as feedback to control the pump drive system. The concept lens itself to various positive displacement pump embodiments including: 1) a glass piston embodiment in which the piston is formed entirely of glass or has an embedded glass core; 2) a fiber-optic or fiber bundle piston embodiment in which the piston comprises an optical fiber or has an optical fiber embedded lengthwise therein; and 3) a GRIN lens (described below) configuration in which a GRIN lens is mounted on the piston and is optically coupled through the piston (as per 1 & 2 above) to form an optical analysis cell between the piston an cylinder bottom.
FIG. 1 shows a preferred embodiment of a positive displacement pump 2 with pump-integrated optical analysis system according to a first embodiment of the invention.
The positive displacement pump 2 generally comprises an optically-transmissive piston actuator rod 12 that may be formed entirely of light-transmissive optical glass, polymeric material, an optical fiber, fiber bundle, or alternatively having an embedded glass/polymeric rod or optical fiber therein. The piston actuator rod 12 is formed with a flat, convex or concave reflective lens 14 at its distal end. The piston actuator rod 12 is slidably mounted in a cylinder 16, seated at its lower end at a piston movement coupling point 22 that serves to drive the piston rod 12 axially under control of a pump drive controller 40 to provide volumetric displacement in the cylinder 16. The piston movement coupling point 22 may be any of a variety of commercially-available electromechanical or magnetic piston drive mechanisms that serve to drive the cylinder axially under control of a pump drive controller 40, which is in turn under the control of a processor CPU 60. The CPU 60 may be any of a variety of commercially available programmable logic controllers or a fully-equipped computer. Likewise, the drive controller 40 may be any of a variety of digital-to-analog pump drive control modules for controlling the displacement of piston rod 12. U.S. Pat. No. 6,739,478 describes a stepper motor drive system where the piston is digitally adjusted to provide a precise distance between the end of the piston and bottom of the cylinder. Other drive systems are commercially available, including those used in syringe pumps by manufacturers such as Cavro and Hamilton, servo systems such as used in the Bausch & Strobel filling equipment for two piece pumps, or Bosch Packaging where steppers or servos are used with three piece piston cylinder pumps. Manual systems can also be used, such as those in the Ranin hand held pipetting devices. One or more rotary valve inlet and outlet ports 20 are in communication with the cylinder 16 for induction and expulsion of fluid there from. The piston actuator rod 12 is optically coupled to an optical system that includes a beam splitter 32, optical detector 34, and optical light source 36. In operation, the light source 36 emits light through the beam splitter 32 into the glass piston actuator rod 12, which transmits the light into an analysis section 18 between the lens 14 and cylinder 16 head. The light is reflected back from the fluid in the analysis section 18 back through the piston actuator rod 12 to the beam splitter 32. The beam splitter may be a conventional prism with dichroic element for separating the source light from reflected light. The reflected light is diverted to the optical detector 34 for sensing. A converter 50 such as a conventional analog-to-digital (A/D) converter converts the raw signal from detector 34 into a digital equivalent, which is in turn transmitted to a controller CPU 60 for interpretation and processing. The signal is analyzed to generate feedback as necessary to control or modify the pump drive control signals emitted from the CPU 50 to the pump drive controller 40 to thereby control the displacement of piston rod 12. Thus, any optical change in the analysis region 18 can be observed via the reflected light and used as feedback in controlling displacement of the piston rod 12.
As an alternative to a flat, convex or concave refractive lens 14, a GRIN lens or graded fiber may be used. GRIN is short for graded-index or gradient index, which is an optical element having a varying refractive index. More specifically, a GRIN lens is a lens whose material refractive index varies continuously as a function of the spatial coordinates in the material. Similarly, a graded-index fiber is an optical fiber having a core refractive index that decreases radially outward toward the cladding. There are two basic types of GRIN lenses: radial or axial (or RGRIN and AGRIN, respectively). The present embodiment preferably employs an RGRIN lens having a flat frontal surface capable of focusing light just as a normal lens with curved surfaces does. Thus, the RGRIN lens is effectively used as a high quality image relay. There are a variety of suitable commercially-available GRIN lenses that will suffice, including EndoGRIN lenses™ from Gradient Lens Corporation or Selfoc™ lens from NSG, Inc. In either case, the lens 14 is optically coupled directly to the piston actuator rod 12. Also, it is not necessary that the entire piston actuator rod 12 be optically transmissive. The same goal can be accomplished with an optical fiber, or glass/polymeric rod embedded axially in the piston actuator rod 12, or an optical fiber may itself serve as the pump piston rod 12. Optical polymers may be any from among the class of acrylates, polyimides, polycarbonates, and olefins (e.g., cyclobutene).
It should also be understood that the use of a piston and cylinder incorporating optical detection in accordance with the invention can be used as a Precision Alignment Dispensing or “Pick and Place” type of pump. This type of pump aspirates fluid into the end of the cylinder (or an extension pipette tip coupled to the cylinder), as the piston is moved upward causing the fluid to move into the pipette tip or pump.
FIG. 2 shows a dual-diameter positive displacement pump 120 with pump-integrated optical analysis system according to an alternate embodiment of the invention, in which like components are numbered as show in FIG. 1. Here fluid is aspirated into the cylinder head 17 via an inlet port 19A coupled to the cylinder 16. The aspiration occurs as the valve 17 is aligned with the inlet port 19A then the piston 16 is moved downward causing the fluid to move into the cylinder 16. The valve 17 is then rotated to the dispensing port 19B. The piston 14 is moved to a second location (the piston 14 and valve 17 move as a set for enhanced precison dispensing to take place),where piston 14 is again moved to dispense the fluid through the outlet port 19B. The foregoing is a conventional dispensing approach such as used Bosch Packaging and other existing companies. The use of optics in this type of pump, if used in the manner shown and described with regard to FIG. 1, provides for an analysis of the effectiveness of the fluid transfer.
FIG. 3 shows a positive displacement pump 220 with pump-integrated optical analysis system according to another embodiment of the invention for small volume precision dispensing requirements of bioscience applications. The positive displacement pump 220 generally comprises a combined optical fiber/piston actuator rod 212 inserted through the capillary channel of a ceramic ferrule 214. The ceramic ferrule 214 is a high-performance, multimode optical connector approximately 2.5 mm in diameter and with an approximate 127 um internal channel for slidably seating and aligning the optical fiber/piston actuator rod 212. The ceramic ferrule 214 is coupled (or integrally joined) to a cylindrical pump chamber 216 for volumetric displacement therein. One or more rotary valve inlet and outlet ports 222 are in communication with the pump chamber 216 for induction and expulsion of fluid there from. The optical fiber/piston actuator rod may be coupled (at left) to an optical system as in FIG. 1, including a beam splitter 32, optical detector 34, and optical light source 36. In operation, the light source emits light through the beam splitter into the optical fiber/piston actuator rod, which transmits the light into the fluid in the pump chamber 216. The light is reflected back from the fluid in the pump chamber 216 back through the optical fiber/piston actuator rod to the beam splitter. The reflected light is diverted to the optical detector for sensing. Thus, any optical change in the pump chamber 216 can be observed via the reflected light.
While the illustrated embodiments show the piston as source and/or detector, the cylinder can be the also a source and/or detector by embedding a light transmissive element therein.
FIG. 4(A-D) is a sequence views of a ‘pick and place” precision fluid pump with pump-integrated optical analysis system according to another alternate embodiment of the invention. In a pick-and-place pump no valving is required because fluid never enters the pump. Rather, a small quantity it is inducted into the cylinder (pipette) tip and is then dispensed there from. The use of optical detection in a pick-and-place pump configuration is also a novel contribution. The pick and place pump generally comprises a piston rod 12 having an optical fiber bundle 29 embedded therein, the fibers of bundle 29 terminating at the face of the piston rod 12. The piston actuator rod 12 is slidably mounted in a cylinder 17. In this Precision Alignment Dispensing or “Pick and Place” type of pump, the distal end of the cylinder 17 is introduced into fluid (as at A), and fluid 27 is aspirated into the end of the cylinder 17 (or an extension pipette tip coupled to the cylinder 17) as the piston 14 is moved upward, causing an amount of fluid 27 to move into the pipette tip or pump cylinder 17. As seen at C the pipette tip or pump cylinder 17 is then moved to a dispensing position with the fluid 27 still in the cylinder 17. The piston 14 is moved downward (as at B) and the fluid is “Touched Off” allowing small dispensing of fluid quantities. In this embodiment optical fiber bundle 29 is a randomized bifurcated fiber optic bundle 29 embedded inside the piston 14 and exposed on the underside of piston 14. A light source (as at 36 of FIG. 1) is coupled to one fiber (or set of fibers) and a detector (as at 34 of FIG. 1) is coupled to the other. As seen in the enlarged sectional view of the piston 14 end at FIG. 4D, any residual fluid left over in the cylinder 17 after a touch off of the piston 14 in a fluid transfer would result in fluid bridging of the source and sensor fibers 29. Thus, the amount of backscatter sensed by the detector is reduced by the residual. Consequently the detector provides an indication as to the effectiveness of the fluid transfer. Similarly, if fluid is present and bridging the source and sensor fibers 29 an optical reflective signal can be detected. If the fluid is not present little to no optical reflective signal is detected. Again, one skilled in the art should understand that other piston configurations may be suitable and the use of glass rods, fibers, GRIN lenses, etc. are considered to be within the scope of the invention.
It should now be apparent that the above-described positive displacement pump design by virtue of its combination optical fiber/piston actuator rod offers a high-throughput and high-accuracy filling and dispensing solution for various applications, with particular utility for small volume precision dispensing requirements of bioscience applications such as cell sorting. In this case the piston pump can make an optical analysis on a discrete volume located within the pump. This analysis can be a “scouting test” and if further results are needed further analysis can be accomplished before the discrete fluid volume is move forward. If this type of discrete pump and cell sorting gating device is synchronized selected volumes can be cut from the discrete fluid dispensing system.
Having now fully set forth the preferred embodiments and certain modifications of the concept underlying the present invention, various other embodiments as well as certain variations and modifications of the embodiments herein shown and described will obviously occur to those skilled in the art upon becoming familiar with said underlying concept. It is to be understood, therefore, that the invention may be practiced otherwise than as specifically set forth in the appended claims.

Claims

1. A pump comprising:

a pump housing defining an internal fluid chamber, at least one inlet port in fluid communication with said internal fluid chamber, and at least one outlet port in fluid communication with said internal fluid chamber;

a pump actuator including a first actuator rod formed of transparent optically transmissive material seated in said pump housing; and

an optical viewing system optically coupled to the chamber of said pump housing through the transmissive pump actuator;

a processor connected to said optical viewing system; and

a pump drive controller connected between said processor and said pump actuator for controlling displacement of said pump actuator in accordance with feedback from said optical viewing system.

2. The pump according to claim 1, wherein said first actuator rod comprises light-transmissive optical glass.

3. The pump according to claim 1, wherein said first actuator rod comprises light-transmissive polymeric material.

4. The pump according to claim 1, wherein said first actuator rod comprises an optical fiber or fiber optic bundle.

5. The pump according to any one of claims 2-4, wherein said pump actuator is a piston entirely formed of said first actuator rod.

6. The pump according to any one of claims 2-4, wherein said pump actuator is a piston and said first actuator rod is embedded axially inside said piston.

7. The pump according to claim 1, wherein said first actuator rod comprises light-transmissive polymeric material.

8. The pump according to claim 1, wherein said first actuator rod comprises a graded index lens.

9. A positive displacement pump, comprising:

a cylinder head defining an internal fluid chamber, at least one valve member position is in fluid communication with said internal fluid chamber for aspirating fluid therein, and at least one valve member position is in fluid communication with at least one outlet port which is in communication with the internal fluid chamber.

a processor connected to said optical viewing system; and

10. The pump according to claim 9, wherein said first actuator rod comprises light-transmissive optical glass.

11. The pump according to claim 9, wherein said first actuator rod comprises light-transmissive polymeric material.

12. The pump according to claim 9, wherein said first actuator rod comprises an optical fiber or fiber optic bundle.

13. The pump according to any one of claims 10-12, wherein said pump actuator is a piston entirely formed of said first actuator rod.

14. The pump according to any one of claims 10-12, wherein said pump actuator is a piston And said first actuator rod is embedded axially inside said piston.

15. The pump according to claim 9, wherein said first actuator rod comprises light-transmissive polymeric material.

16. The pump according to claim 9, wherein said first actuator rod comprises a graded index lens.

17. A pump comprising:

a pump chamber;

a ceramic ferrule in fluid communication with said pump chamber and defined by an internal capillary channel;

an optical fiber slidably seated inside the capillary channel of said ceramic ferrule; and

an optical viewing system coupled to the optical fiber for viewing inside said pump chamber;

a processor connected to said optical viewing system; and

18. A precision fluid dispensing pump, comprising:

a pump housing defining an internal fluid chamber;

a pump actuator including a piston rod seated in said pump housing, and a plurality of optical fibers inside said piston rod terminating at a face of said piston rod, said plurality of optical fibers including a source fiber and a sensor fiber; and

an optical viewing system optically coupled to the optical fibers inside said piston rod.

19. The precision fluid dispensing pump according to claim 18, wherein said source fiber and sensor fiber are arranged for detecting any residual fluid left over in the pump housing and bridging the source and sensor fibers.

20. The precision fluid dispensing pump according to claim 18, wherein said source fiber and sensor fiber are arranged for detecting an optical reflective.