US20030171874A1 - Compositions of hepatitis C virus NS5B polymerase and methods for crystallizing same - Google Patents

Compositions of hepatitis C virus NS5B polymerase and methods for crystallizing same Download PDF

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US20030171874A1
US20030171874A1 US10/170,131 US17013102A US2003171874A1 US 20030171874 A1 US20030171874 A1 US 20030171874A1 US 17013102 A US17013102 A US 17013102A US 2003171874 A1 US2003171874 A1 US 2003171874A1
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Charles Lesburg
Michael Cable
Zhi Hong
Anthony Mannarino
Patricia Weber
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    • C12N2770/24011Flaviviridae
    • C12N2770/24211Hepacivirus, e.g. hepatitis C virus, hepatitis G virus
    • C12N2770/24222New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes

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Abstract

The invention relates to the purification, crystallization of and structure of hepatitis C virus (HCV) NS5B RNA-dependent RNA polymerase. Also, crystallization conditions for NS5B are provided. Further, the atomic coordinates for the NS5B protein are disclosed. Examples of its use for the determination of the three-dimensional atomic structures of HCV NS5B or HCV NS5B in complex with substrates or substrate analogs or inhibitors are also provided.

Description

    FIELD OF THE INVENTION
  • The present invention relates to compositions and crystals of a hepatitis C virus RNA dependent RNA polymerase called NS5B and to methods of producing such crystals. This invention relates to methods of using the structure coordinates of hepatitis C virus NS5B to solve the structure of homologous NS5B proteins or complexes containing the NS5B protein. [0001]
  • BACKGROUND OF THE INVENTION
  • Infection by hepatitis C virus (HCV) is a compelling human medical problem. HCV is recognized as the causative agent for most cases of non-A and non-B hepatitis, with an estimated human seroprevalence of 1% globally [Choo, et al., [0002] Science, 244:359-362 (1989); Kuo, et al., Science, 244:362-364 (1989); Purcell, FEMS Microbiology Reviews; 14:181-192 (1994); Van der Poel. Current Studies in Hematology and Blood Transfusion, H. W. Reesink, Ed., (Basel: Karger), pp. 137-163 (1994)]. Four million individuals may be infected in the United States alone [Alter, and Mast, Gastroenterol. Clin. North Am., 23:437-455 (1994)].
  • Upon first exposure to HCV, only about 20% of infected individuals develop acute hepatitis and appear to resolve the infection spontaneously. In the most instances (˜80%), however, the virus establishes a chronic infection that persists for decades [Iwarson, [0003] FEMS Microbiology Reviews, 14: 201-204 (1994)]. This usually results in recurrent and progressively worsening liver inflammation, which often leads to more severe disease states such as cirrhosis and hepatocellular carcinoma [Kew, FEMS Microbiology Reviews, 14: 211-220 (1994); Saito, et al., Proc. Natl. Acad. Sci. USA 87: 6547-6549 (1990)].
  • The HCV genome encodes a polyprotein of approximately 3000 amino acids [Choo, et al. [0004] Proc. Natl. Acad. Sci. USA, 88: 2451-2455 (1991); Kato, et al., Proc. Natl. Acad. Sci. USA, 87: 9524-9528 (1990); Takamizawa, et al., J. Virol., 65:1105-113 (1991)]. The HCV non-structural (NS) proteins provide catalytic machinery for viral replication. The NS proteins are derived by proteolytic cleavage of the polyprotein [Bartenschlager, et al., J. Virol., 67: 3835-3844 (1993); Grakoui, et al., J. Virol, 67: 2832-2843 (1993); Grakoui, et al., J. Virol., 67:1385-1395 (1993); Tomei, et al., J. Virol., 67:4017-4026 (1993)].
  • Until recently, the only therapy available for treating chronic HCV infection was interferon-α(IFN-α). However, not all patients are responsive to IFN-α treatment. While combination therapy of IFN-α and ribavirin has significantly improved the clinical outcome, a need exists for more effective methods of treatment. [0005]
  • The NS5B RNA dependent RNA polymerase is considered a valuable target for antiviral agents. However, drug discovery efforts directed towards the NS5B protein have been hampered by the lack of structural information about NS5B. Such structural information would provide valuable information for discovery of HCV NS5B polymerase inhibitors. However, efforts to determine the structure of HCV NS5B polymerase have been hampered by difficulties in obtaining sufficient quantities of pure active enzyme and by poor solubility of the enzyme. There have been no crystals reported of any NS5B polymerase polypeptide. Thus, x-ray crystallographic analysis of such proteins has not previously been available. [0006]
  • SUMMARY OF THE INVENTION
  • The present invention addresses this need by providing, for the first time, compositions comprising a crystallized hepatitis C virus (HCV) NS5B polypeptide. Methods for obtaining purified and crystallized NS5B polypeptide are also provided. Such methods comprise solubilizing a NS5B polypeptide in a solution containing a protein stabilizing agent, subjecting the NS5B preparation to cation exchange chromatography, and allowing crystals to form in a precipitant solution containing a protein stabilizing agent and polyethylene glycol under conditions in which crystallization occurs. [0007]
  • The invention also provides a machine-readable data storage medium encoded with the structural coordinates of a NS5B polypeptide or a homologue thereof. Such a homologue contains backbone atoms having a root mean square deviation of equivalent Cα atoms of less than 3.0 Å when compared to the NS5B polypeptide. [0008]
  • The invention also provides a method for determining at least a portion of the three-dimensional structure of molecules or molecular complexes which contain at least some structurally similar features to a HCV NS5B polypeptide. [0009]
  • Still another aspect of the present invention comprises a method of selecting or optimizing a potential ligand or inhibitor by performing drug design with a three-dimensional structure determined for the crystal, preferably in conjunction with computer modeling. The potential ligand or inhibitor is then contacted with the NS5B polypeptide and the binding thereof is detected. If the ligand is a potential inhibitor of NS5B activity, the candidate drug may then be contacted with NS5B and the inhibition of its activity can be measured. [0010]
  • In another embodiment of the invention, a method of obtaining structural information concerning a molecular complex of unknown structure by using the structure coordinates set forth in Table 1 is provided. Such a method comprises the steps of: generating x-ray diffraction data from a crystal of said complex, and applying crystallographic phases derived from at least a portion of the structure coordinates set forth in Table 1 to said x-ray diffraction pattern to generate a three-dimensional electron density map of at least a portion of the unknown structure.[0011]
  • BRIEF DESCRIPTION OF THE FIGURE
  • FIG. 1([0012] a) depicts the motif organization of NS5B.
  • FIG. 1([0013] b) depicts a schematic diagram of NS5B polymerase.
  • DETAILED DESCRIPTION OF THE INVENTION
  • In order that the invention described herein may be more fully understood, the following detailed description is set forth. All references cited herein are incorporated in their entirety by reference. [0014]
  • The present invention provides, for the first time, crystallizable compositions comprising a HCV NS5B polymerase polypeptide. Thus, one embodiment of this invention provides a composition comprising a crystalline hepatitis C virus NS5B polypeptide. [0015]
  • Another embodiment of the invention provides a NS5B protein whose sequence is more similar to various HCV genotypes and subtypes, particularly at amino acid positions 335, 344 and 550 of SEQ ID NO: 1. Preferred amino acids at these positions are valine, alanine and glutamine respectively, while the published sequence (GenBank Accession No. 130458) of the BK isolate has threonine, valine and arginine at the corresponding positions. [0016]
  • Yet another embodiment of this invention provides methods of using NS5B polypeptides to grow a crystal containing such polypeptides. One such method comprises solubilizing a NS5B protein preparation in a solution containing a protein stabilizing agent; subjecting the NS5B protein preparation to cation exchange chromatography in a buffer containing glycine; and allowing crystals to form in the presence of a precipitant containing a protein stabilizing agent, a salt and polyethylene glycol under conditions in which crystallization occurs. Preferably, such a crystal effectively diffracts x-rays for the determination of the atomic coordinates of the protein to a resolution of greater than 4.0 Ångströms. More preferably, the crystal effectively diffracts x-rays for the determination of the atomic coordinates of the protein to a resolution of greater than 2.8 Ångströms. In a most preferred embodiment, the crystal effectively diffracts x-rays for the determination of the atomic coordinates of the protein to a resolution of greater than 2.2 Ångströms. [0017]
  • As used herein, the terms “HCV NS5B” and “NS5B” refers to the hepatitis C virus non-structural 5B protein as defined in Grakoui, et al., [0018] J. Virol. 67(3):1385-1395 (1993). See also Simons et al., Proc. Natl. Acad. Sci. USA 92(8): 3401-3405 (1995).
  • HCV “NS5B polypeptides” are polypeptides which have RNA dependent RNA polymerase-like domains similar to the naturally-occurring HCV NS5B. It also includes HCV NS5B and polypeptide fragments of NS5B having polymerase functionalities. These polypeptides also include polypeptides that differ from the NS5B polymerase by having amino acid deletions, substitutions, and additions. NS5B polypeptides may be derived from various HCV genotypes and subtypes known in the art. [0019]
  • The NS5B polypeptide may be produced by any well-known method, including synthetic methods, such as solid phase, liquid phase and combination solid/liquid phase syntheses; recombinant DNA methods, including cDNA cloning, optionally combined with site-directed mutagenesis; and/or purification of the natural products, optionally combined with enzymatic or chemical cleavage methods to produce NS5B or fragments thereof. [0020]
  • Various truncated forms of NS5B are within the scope of the invention and may enhance the solubility of the NS5B protein. A preferred truncation comprises a truncation of a stretch of amino acids in the carboxy terminal region of the protein, preferably containing hydrophobic amino acids. Most preferably, such a truncation includes the four leucine residues in the C-terminal region of NS5B. Truncations of 12-70 amino acids are preferred [Ferrari et al., [0021] J. Virol. 73:1649-1654 (1999)]. Optionally, it may also be desirable to add amino acids onto the NS5B protein or truncated NS5B. One preferred addition is a polyhistidine tag, 5-20 amino acids in length. Most preferred is a 6 amino acid histidine tag added to the amino-terminus of the NS5B protein or truncated NS5B. Preferably, the NS5B protein has a histidine tag at its amino-terminus for use in purifying the protein.
  • In one embodiment of the invention, the NS5B polymerase polypeptide is tNS5B, a recombinantly-produced truncated hepatitis C virus RNA dependent RNA polymerase polypeptide. The tNS5B protein contains both a 21 amino acid deletion at the carboxy-terminus and a 6 amino acid histidine tag at the amino-terminus [Ferrari, et al., [0022] J. Virol. 73:1649-1654 (1999)].
  • One aspect of the present invention relates to a method of purifying the NS5B polypeptides and obtaining NS5B crystals. Preferably, the NS5B polypeptide may be produced recombinantly in [0023] E. coli and initial purification may be accomplished by nickel chelate chromatography, as previously described [Petty (1996) “Metal chelate affinity chromatography” in: Ausubel, et al., eds. Current Protocols in Molecular Biol., Vol. 2 New York, John Wiley and Sons]. This NS5B preparation is transferred into a solution containing a protein stabilizing agent and glycine. Next, the preparation is applied to a cation exchange resin and subjected to chromatography, eluting the protein with a salt gradient. The resulting solution preferably contains a protein stabilizing agent, a salt, a buffering agent and optionally a reducing agent or an oxygen scavenger. Examples of suitable reducing agents are dithiothreitol (DTT), dithioerythritol (DET) and β-mercaptoethanol. If necessary, the reducing agent is present in the buffered solution at a concentration of about 5 mM and is preferably DTT. The pH of the buffering agent may range from 4.5 to 8, preferably between pH 7 and 8.
  • Although other solution components can be substituted for the above described components, the protein stabilizing agent and salt appear to be important for the solubility of the NS5B protein preparation. Protein stabilizing agents include polyols, sugars, as well as amino acids and amino acid analogs. Some examples include erythritol, sorbitol, glycerol, fructose, trehalose, proline, β-alanine, taurine and glycine betaine. These agents are sometimes referred to as cosmotropic agents and are well known in the art. [Jeruzalmi & Steitz, [0024] J. Mol. Biol. 274: 748-756 (1997)]. The concentration of such agents will vary depending upon the type of agent employed. For example, if glycerol is chosen, it is preferably provided in a concentration range from about 2 to about 20% (v/v), preferably about 10% (v/v), while a salt may be provided in a concentration of above about 150 mM. Many salts are routinely used in the art and may be variously used in the method of the present invention.
  • Glycine in the buffer solution maintains the solubility of the NS5B preparation in the absence of salt and allows further purification by cation exchange chromatography. Various types of cation exchange chromatography may be employed in this purification step. See Scopes, [0025] Protein Purification: Principles and Practice, Third ed., Springer-Verlag, New York (1994). Glycine can range in concentration from 500-1500 mM, preferably one molar. Glycine is preferably removed after cation exchange chromatography.
  • Compounds known as “precipitants” are often used to decrease the solubility of the polypeptide in a concentrated solution. Alternatively, “precipitants” can be changes in physical or chemical parameters which decrease polypeptide solubility, including temperature, pH and salt concentrations. Precipitants induce crystallization by forming an energetically unfavorable precipitant-depleted layer around the polypeptide molecules. To minimize the relative amount of this depletion layer, the polypeptides form associations and ultimately crystals as explained in Weber, [0026] Advances in Protein Chemistry 41:1-36 (1991) which is incorporated by reference. In addition to precipitants, other materials are sometimes added to the polypeptide crystallization solution. These include buffers to adjust the pH of the solution (and hence surface charge on the peptide) and salts to reduce the solubility of the polypeptide. Various precipitants are known in the art and include the following: ammonium sulfate, ethanol, 3-ethyl-2,4 pentanediol; and many of the polyglycols, such as polyethylene glycol. A suitable precipitant for crystallization of NS5B polypeptides is polyethylene glycol (PEG), which combines some of the characteristics of the salts and other organic precipitants.
  • Crystallization may be accomplished by using any of the known methods in the art [Giegé, et al., [0027] Acta Crystallogr. D50: 339-350 (1994); McPherson, Eur. J. Biochem. 189: 1-23 (1990)]. Such techniques include microbatch, hanging drop, seeding and dialysis. Preferably, hanging-drop vapor diffusion [McPherson, J. Biol. Chem. 251: 6300-6303 (1976)] or microbatch methods [Chayen, Structure 5: 1269-1274 (1997)] are used. In each of these methods, it is important to promote continued crystal growth after nucleation by maintaining a supersaturated solution. In the microbatch method, polypeptide is mixed with precipitants to achieve supersaturation, the vessel is sealed and set aside until crystals appear. In the dialysis method, polypeptide is retained in a sealed dialysis membrane which is placed into a solution containing precipitant. Equilibration across the membrane increases the precipitant concentration thereby causing the polypeptide to reach supersaturation levels.
  • It is desirable to use a NS5B protein preparation having a concentration of at least 1 mg/mL and preferably less than 65 mg/mL. Crystallization may be best achieved in a precipitant solution containing polyethylene glycol 1000-20,000 (PEG; average molecular weight ranging from 1000-20,000 Da), preferably 4000-5000 with concentrations ranging from 15-25% (w/v). It is further desirable to avoid the use of extremely high and low molecular weight PEGs. It may also be desirable to include a protein stabilizing agent. If glycerol is chosen as the protein stabilizing agent, it is preferably provided at concentration ranging from 0.5 to 20% (v/v). A suitable salt, such as sodium chloride, may also be desirable in the precipitant solution, preferably in concentration ranging from 1 to 1000 mM. The precipitant is preferably buffered to a pH of about 4.5 to 8.0. Most preferred is a buffer solution at a pH of about 5 to 6. Specific buffers useful in the precipitant solution may vary and are well-known in the art [Scopes, [0028] Protein Purification: Principles and Practice, Third ed., (1994) Springer-Verlag, New York]. Examples of useful buffers include but are not limited to Tris, MES and acetate. Crystals routinely grow in a wide range of temperature. It is however preferred that crystals form at temperatures between 4° C. and 26° C., and more preferably at 20° C. to 22° C.
  • The crystals of the present invention have a wide range of uses. For example, high quality crystals are suitable for x-ray or neutron diffraction analysis to determine the three dimensional structure of NS5B polypeptides and in particular to assist in the identification of the protein's active and effector sites. Knowledge of these sites and solvent accessible residues allow rational design and construction of agonists and antagonists for NS5B polypeptides. [0029]
  • In addition, crystallization itself can be used as a purification method. In some instances, a polypeptide or protein crystallizes from a heterogeneous mixture into crystals. Isolation of such crystals by filtration and/or centrifugation, followed by redissolving the polypeptide affords a purified solution suitable for use in growing the high-quality crystals necessary for diffraction analysis. [0030]
  • Once a crystal of the present invention is grown, x-ray diffraction data can be collected. One method for determining structure uses synchrotron radiation, under standard cryogenic conditions for such x-ray diffraction data collection. However alternative methods may also be used. For example, crystals can be characterized by using x-rays produced in a conventional source (such as a sealed tube or a rotating anode), optionally under cryogenic conditions. Methods of characterization include, but are not limited to, precession photography, oscillation photography and diffractometer data collection. [0031]
  • Advantageously, the crystallizable compositions provided by this invention are amenable to x-ray crystallography. Thus, this invention also provides the three-dimensional structure of an HCV NS5B polypeptide at 1.9 Å resolution. Importantly, this has provided for the first time, detailed information about the shape and structure of the NS5B polymerase protein. [0032]
  • The three-dimensional structure of the HCV NS5B polymerase of this invention is defined by a set of structure coordinates as set forth in Table 1. The term “structure coordinates” refers to Cartesian coordinates derived from mathematical equations related to the patterns obtained on diffraction of a beam of x-rays by the atoms (scattering centers) of NS5B polymerase in crystal form. The diffraction data are used to calculate electron density maps and to establish the positions of the individual atoms of the NS5B enzyme. [0033]
  • Those of skill in the art will understand that a set of structure coordinates for an enzyme or an enzyme-complex or a portion thereof, is a relative set of points that define a shape in three dimensions. Thus, it is possible that an entirely different set of coordinates could define a similar or identical shape. Moreover, slight variations in the individual coordinates will have little effect on overall shape. [0034]
  • The variations in coordinates discussed above may be generated because of mathematical manipulations of the structure coordinates. For example, the structure coordinates set forth in Table 1 can be manipulated by crystallographic permutations of the structure coordinates, fractionalization of the structure coordinates, additions, subtractions, rotations or translations to sets of the structure coordinates or any combinations of the above. [0035]
  • Alternatively, modifications in the crystal structure due to mutations, additions, substitutions, and/or deletions of amino acids, or other changes in any of the components that make up the crystal may also account for variations in structure coordinates. If such variations are within an acceptable standard error as compared to the original coordinates, the resulting three-dimensional shape is considered to be the same. [0036]
  • Various computational analyses are therefore necessary to determine whether a molecular complex or a portion thereof is sufficiently similar to all or parts of the NS5B polypeptide structure described above as to be considered the same. Such analyses may be carried out in current software applications, such as the Molecular Similarity application of QUANTA (Molecular Simulations Inc., San Diego, Calif.) version 4.1, and as described in the accompanying User's Guide. [0037]
  • The Molecular Similarity application permits comparisons between different structures, different conformations of the same structure, and different parts of the same structure. The procedure used in Molecular Similarity to compare structures is divided into four steps: 1) input the structures to be compared; 2) define the atom equivalences in these structures; 3) perform a fitting operation; and 4) analyze the results. [0038]
  • Each structure is identified by a name. One structure is identified as the target (i.e., the fixed structure); all remaining structures are working structures (i.e., moving structures). Since atom equivalency within QUANTA (Molecular Simulations Inc., San Diego, Calif.) is defined by user input, for the purpose of this invention, equivalent atoms are defined as protein alpha carbon atoms (Cα). When the Cα atoms of the working structure are superimposed on the relevant reference Cα atoms described by structure coordinates listed in Table 1 with an RMSD of less than 3 Å, the two structures are considered identical. More preferably, the root mean square deviation is less than 2.0 Å. [0039]
  • The term “root mean square deviation” or “RMSD” means the square root of the arithmetic mean of the squares of the deviations from the mean. It is a way to express the deviation or variation from a trend or object. For purposes of this invention, the “root mean square deviation” defines the variation in the alpha carbon of a protein or protein complex from the relevant portion of the alpha carbon of the NS5B polypeptide as defined by the structure coordinates described herein. [0040]
  • Thus, in accordance with the present invention, the structure coordinates of the NS5B polypeptide and portions thereof are stored in a machine-readable storage medium. Such data may be used for a variety of purposes, such as drug discovery and x-ray crystallographic analysis of a protein crystal. [0041]
  • Accordingly, one aspect of this invention provides a machine-readable data storage medium comprising a data storage material encoded with the structure coordinates set forth in Table 1. [0042]
  • A computer system useful in reading the machine readable data storage medium includes a computer comprising a central processing unit (“CPU”) and a memory storage device. In general, the computer system may be any computer with an operating system such as MS-DOS, PC-DOS, Windows, OS/2, Unix, Unix variant or MacOS. Particularly preferred computer systems are the Silicon Graphics Octane workstation or Compaq AlphaServer DS20. Other hardware systems and software packages will be known to those skilled in the art. [0043]
  • Input hardware coupled to the computer system by input lines, may be implemented in a variety of ways. Machine-readable data of this invention may be inputted via the use of a modem or modems connected by a telephone line or a dedicated data line. Alternatively or additionally, the input hardware may comprise CD-ROM drives or disk drives. A keyboard or optical scanner may also be used as an input device. [0044]
  • Output hardware, coupled to the computer system by output lines, may similarly be implemented by conventional devices. By way of example, output hardware may include a display terminal for displaying a graphical representation of a binding pocket of this invention using a program such as INSIGHT (Molecular Simulations Inc., San Diego, Calif.) as described herein. Output hardware might also include a printer, so that hard copy output may be produced, or a disk drive, to store system output for later use. [0045]
  • In operation, the CPU coordinates the use of the various input and output devices, coordinates data accesses from mass storage and accesses to and from working memory, and determines the sequence of data processing steps. A number of programs may be used to process the machine-readable data of this invention. Such programs are discussed in reference to the computational methods of drug discovery as described herein. Specific references to components of the computer system are included as appropriate throughout the following description of the data storage medium. [0046]
  • A magnetic data storage medium can be encoded with a machine-readable data by a computer system as described above. Storage medium may be, for example, a conventional floppy diskette or hard disk, having a suitable substrate, which may be conventional, and a suitable coating, which may be conventional, on one or both sides, containing magnetic domains whose polarity or orientation can be altered magnetically. Storage medium may also have an opening for receiving the spindle of a disk drive or other data storage device. Alternatively, an optically-readable data storage medium can be encoded with such a machine-readable data, or a set of instructions. Medium can be a conventional compact disk read only memory (CD-ROM) or a rewritable medium such as a magneto-optical disk which is optically readable and magneto-optically writable. [0047]
  • In the case of CD-ROM, as is well known, a coating is reflective and is impressed with a plurality of pits to encode the machine-readable data. The arrangement of pits is read by reflecting laser light off the surface of the coating. A protective coating, which preferably is substantially transparent, is provided on top of the coating. [0048]
  • In the case of a magneto-optical disk, as is well known, the coating has no pits, but has a plurality of magnetic domains whose polarity or orientation can be changed magnetically when heated above a certain temperature, as by a laser. The orientation of the domains can be read by measuring the polarization of laser light reflected from the coating. The arrangement of the domains encodes the data as described above. [0049]
  • The present invention permits the use of structure-based drug design techniques to design, select, and optionally optimize the structure of chemical entities, including inhibitory compounds that are capable of binding to HCV NS5B polymerase or any portion thereof. Also, de novo drug design methods with iterative structure-based drug design methods can be used to develop inhibitors from the crystal structure of the present invention. [0050]
  • One particularly useful drug design technique enabled by this invention is structure-based drug design. Structure-based drug design is a method for optimizing associations between a protein and a compound by determining and evaluating the three-dimensional structures of one or more sets of protein/compound complexes. [0051]
  • Those skilled in the art will realize that association of natural ligands or substrates with the binding pockets of their corresponding receptors or enzymes is the basis of many biological mechanisms of action. The term “binding pocket”, as used herein, refers to any region of a molecule or molecular complex, that, as a result of its shape, favorably associates with another chemical entity or compound. Similarly, drugs may exert their biological effects through association with the binding pockets of receptors and enzymes. Such association may occur with all or a subset of the binding pockets. An understanding of such associations will help lead to the design of drugs having more favorable associations with the target enzyme, and thus, improved biological effects. Therefore, this information is valuable in designing enzyme inhibitors, such as inhibitors of HCV NS5B polypeptides. [0052]
  • In iterative structure-based drug design, crystals of a series of protein/compound complexes are obtained and then the three-dimensional structures of each complex are solved. Such an approach provides insight into the association between the proteins and compounds of each complex. This is accomplished by selecting a compound with inhibitory activity, obtaining crystals of the polypeptide in complex with this compound, solving the three-dimensional structure of the complex, and comparing the polypeptide/compound associations between the new structure and previously solved structure(s). By observing how changes in the compound affect the protein/compound associations, these associations may be optimized. [0053]
  • In some cases, iterative structure-based drug design is carried out by forming successive protein-compound complexes and then crystallizing each new complex. Alternatively, a pre-formed protein crystal is soaked in the presence of an inhibitor, thereby forming a protein/compound complex and obviating the need to crystallize each individual protein/compound complex. Advantageously, the HCV NS5B polymerase crystals provided by this invention may be soaked in the presence of a compound or compounds, such as NS5B inhibitors, substrates or other ligands to provide NS5B polypeptide compound crystal complexes. As used herein, the term “soaked” refers to a process in which the crystal is transferred to a solution containing the compound of interest or the compound of interest is added to the solution containing the crystal. [0054]
  • The structure coordinates set forth in Table 1 can also be used to aid in obtaining structural information about another crystallized molecule or molecular complex. This may be achieved by any of a number of well-known techniques, including molecular replacement. [0055]
  • The structure coordinates set forth in Table 1 can also be used for determining at least a portion of the three-dimensional structure of molecules or molecular complexes which contain at least some structurally similar features to HCV NS5B. In particular, structural information about another crystallized molecule or molecular complex may be obtained using well-known techniques, including molecular replacement. [0056]
  • Therefore, another aspect of this invention provides a method of utilizing molecular replacement to obtain structural information about a crystallized molecule or molecular complex whose structure is unknown comprising the steps of: [0057]
  • a) generating an x-ray diffraction pattern from said crystallized molecule or molecular complex; and [0058]
  • b) applying crystallographic phases derived from at least a portion of the structure coordinates set forth in Table 1 to the x-ray diffraction pattern to generate a three-dimensional electron density map of at least a portion of the molecule or molecular complex whose structure is unknown. [0059]
  • Once the structure coordinates of a protein crystal have been determined, they are useful in solving the structures of other crystals. In addition, the structures of NS5B complexes can be determined from the structure coordinates of the present invention. For example, complexes may be crystallized and their structure elucidated using such methods as difference Fourier or molecular replacement. NS5B complexes suitable for such analysis include, for example, NS5B in complex with an oligonucleotide template/primer duplex (i.e. substrate), wherein the duplex may have a single-stranded overhang of one or both strands on either or both ends of the oligonucleotide. Another example complex is NS5B complexed with a nucleotide triphosphate (i.e. substrate) or analog thereof. Most preferred is NS5B complexed with inhibitors such as nucleotide analogs, non-nucleotide inhibitors or inhibitors unrelated to substrate molecules. Yet another NS5B complex suitable for structure determination using the structure coordinates of NS5B is NS5B in complex with other members of the putative replicase complex, such as HCV NS3 protein, NS3 helicase domain, NS3 protease domain or other HCV proteins. A further NS5B complex suitable for structure determination is NS5B in complex with one or more cellular host factors (Cf. thioredoxin and T7 DNA polymerase) [Doublié et al., [0060] Nature 391: 251-258 (1998)]. Suitable complexes of NS5B may contain several other molecules or combinations of the above described complexes.
  • Preferably, the crystallized molecule or molecular complex comprises a NS5B polypeptide. More preferably, the crystallized molecule or molecular complex is obtained by soaking a crystal of this invention in a solution. By using molecular replacement, all or part of the structure coordinates of the NS5B polymerase provided by this invention (and set forth in Table 1) can be used to determine the structure of a crystallized molecule or molecular complex whose structure is unknown more quickly and efficiently than attempting to determine such information ab initio. [0061]
  • Molecular replacement provides an accurate estimation of the phases for an unknown structure. Phases are a factor, in equations used to solve crystal structures, that can not be measured experimentally. Obtaining accurate values for the phases, by methods other than molecular replacement, is a time-consuming process. However, when the crystal structure of a protein containing at least a homologous portion has been solved, the phases from the known structure may provide a satisfactory initial estimate of the phases for the unknown structure. [0062]
  • Thus, this method involves generating a preliminary model of a molecule or molecular complex whose structure coordinates are unknown, by orienting and positioning the relevant portion of the NS5B polymerase according to Table 1 within the unit cell of the crystal of the unknown molecule or molecular complex so as best to account for the observed x-ray diffraction pattern amplitudes to generate an electron density map of the structure whose coordinates are unknown. This, in turn, can be subjected to any well-known model building and structure refinement technique to provide a final, accurate structure of the unknown crystallized molecule or molecular complex [Lattman, “Use of the Rotation and Translation Functions”, in [0063] Meth. Enzymol., 115: 55-77 (1985); Rossman, ed., “The Molecular Replacement Method”, Int. Sci. Rev. Ser., No. 13, Gordon & Breach, New York (1972)].
  • Phase information from the structure coordinates of the present invention may be used to elucidate the structure of other crystals. For example, NS5B molecules in complex with other atoms or molecules, as described above, including complexes containing a heavy atom substructure from which useful phasing information may be extracted. Such complexes include, for example, those containing sulfur atoms of the endogenous cysteine and methionine amino acids as well as any atoms incorporated into, soaked into or cocrystallized within the crystal lattice. Other structures which can be elucidated using the phase information of the present invention include for example other RNA-dependent RNA polymerases (RdRps) of sufficient three-dimensional structure similarity to HCV NS5B as to be solved using molecular replacement. Examples of such RdRps include but are not limited to RdRp from bovine viral diarrhea virus, RdRp from yellow fever virus and RdRp from Dengue virus. Also, RdRps in a complex with a small molecule substrate, inhibitor, intermediate, transition state analog, product or analog of any of these may also be solved using phase information contained in the present invention. Other complexes whose structure can be elucidated from the phase information of the present invention include an RdRp in a complex with a macromolecule such as a template/primer substrate or host elongation factor, such as T7 DdDp/thioredoxin, or with a transcription inhibitor, such as T7 DdRp/T7 lysozyme, or with another HCV protein, such as NS3 protein, NS3 helicase or NS3 protease for example. Complexes containing a combination of the above molecules may also be solved using phase information of the present invention. [0064]
  • The structure of any portion of any crystallized molecule or molecular complex that is sufficiently homologous to any portion of the NS5B polymerase can be solved by this method. The difference Fourier method simply calculates an electron density map using phases calculated from the structure coordinates and observed diffraction amplitudes from a crystal of an unknown structure. This well-known method is often used to solve structures of protein/ligand complexes where the ligand is small and does not affect the crystal form significantly. [0065]
  • In a preferred embodiment, the method of molecular replacement is utilized to obtain structural information about a molecule wherein the molecule comprises a NS5B polypeptide or variant or complex thereof. Preferably the NS5B polypeptide comprises tNS5B or homologues thereof. [0066]
  • The structure coordinates of NS5B polymerase provided by this invention are particularly useful in solving the structure of other crystal forms of NS5B polypeptides. [0067]
  • The structure coordinates are also particularly useful to solve the structure of crystals of NS5B polypeptides, particularly tNS5B and polypeptides related in structure to NS5B. This approach enables the determination of the optimal sites for interaction between chemical entities, including interaction of candidate NS5B inhibitors with NS5B. [0068]
  • All of the complexes referred to above may be studied using well-known x-ray diffraction techniques may be refined versus x-ray data to 3 Å resolution or better, to an R[0069] free value of about 0.40 or less using computer software, such as X-PLOR [Yale University, ©1992, distributed by Molecular Simulations, Inc.; see e.g., Blundell & Johnson, supra; Meth, Enzymol., vol. 114 & 115, H. W. Wyckoff et al., eds., Academic Press (1985)]. This information may thus be used to optimize known NS5B inhibitors, and to design new NS5B inhibitors.
  • In order that this invention be more fully understood, the following examples are set forth. These examples are for the illustrative purposes only and are not to be construed as limiting the scope of this invention in any way. [0070]
  • EXAMPLE 1 Construction of tNS5B
  • The amino acid sequence of NS5B (BK) was compared to 16 NS5B proteins from different genotypes and subtypes. Four isolates represent genotype 1 subtype a (HCV-1a) and five are from HCV-1b. The rest are from HCV-2a, 2b, 3a, 3b, 4a, 5a and 6a. Two substitutions were made to the NS5B (BK) sequence, one “T” to “V” at position 335, the other “V” to “A” at position 344 numbered according to SEQ ID NO: 1. The NS5B protein contains an additional change from the published NS5B (BK) sequence (GenBank Accession No. 130458), namely, an “R” to “Q” at position 550 numbered according to SEQ ID NO: 1. This NS5B protein has an amino acid sequence more similar than the published NS5B sequence to the other genotypes analyzed. [0071]
  • To make these substitutions, site-directed mutagenesis using the “Quick Change” mutagenesis kit (Stratagene, Calif.) was performed. The resulting clone was verified for correctness by direct sequencing. This NS5B construct was subcloned into pET-21b (Novagen, Wis.) between NheI and BamHI sites. Additional codons were engineered at the N-terminus (coding for a polyhistidine tag, MASHHHHHH, and replacing the native amino acids “SM” at the N-terminus of NS5B) to facilitate the cloning and purification. The C-terminal 21 amino acids were deleted to improve the solubility of NS5B. The sequence of the modified NS5B (designated as His-NS5BΔCT21) is set forth as SEQ ID NO: 1. [0072]
  • EXAMPLE 2 Expression and Purification of tNS5B
  • Hepatitis C virus (HCV) NS5B RNA-dependent RNA polymerase (RdRp) was cloned, transformed into [0073] E. coli and purified as previously described using nickel chelate chromotography. The particular construct used in this Example is described above and incorporated a six histidine tag at the N-terminus and 21-residue truncation from the C-terminus. See also Ferrari et al., J. Virol. 73:1649-1654 (1999). HCV NS5B RdRp was further purified using cation exchange resin (Mono-S HR 16/10, (Amersham Pharmacia Biotech AB, Uppsala, Sweden)) after overnight dialysis into 10% (v/v) glycerol, and 1 M glycine pH 7.0. After gel filtration chromatography (HiPrep 16/60 Sephacryl S100 High Resolution (Amersham Pharmacia AB, Uppsala, Sweden)) into 10% (v/v) glycerol, 600 mM NaCl, 5 mM DTT and 10 mM Tris pH 7.5, recombinant HCV NS5B was concentrated to between 10 and 40 mg/mL. At this stage, the concentrated protein was stored at −80° C. until needed.
  • EXAMPLE 3 Crystallization and Data Collection
  • Crystallization experiments were conducted using both hanging-drop vapor diffusion and microbatch methods using newly prepared or freshly-thawed protein. For vapor-diffusion experiments, 2 μL of protein was mixed with an equal volume of precipitant solution, placed on the underside of a siliconized glass coverslip, and sealed in close proximity to 1 mL of the precipitant solution. For the microbatch experiments, 2 μL of protein was mixed thoroughly with an equal volume of precipitant solution and dispensed beneath a layer of paraffin oil. The precipitant solution contained poly(ethylene)glycol 1000 to 20,000 (PEG; average MW ranging from 1000 to 20,000 Da) with concentrations ranging from 15 to 25% [(v/v) or (w/v)]. The precipitant solution also contained 10% (v/v) glycerol and concentrations of NaCl ranging from 0 to 600 mM NaCl, using various buffers between pH 4.5 and 7.0. These buffers included acetate, MES, and Tris. After incubation at temperatures between 4° C. and 26° C. for 24 h, small plate-like crystals formed. Crystals grew to terminal size within two weeks with dimensions up to 300×300×50 μm. After transfer of the crystals to cryoprotectant containing a few percent more PEG than the crystallization medium and up to 30% (v/v) glycerol, the crystals could be either frozen directly in liquid propane for storage prior to diffraction data collection or frozen in a gaseous nitrogen stream immediately before diffraction data collection. [0074]
  • EXAMPLE 4 Protein Preparation, MAD Experiment and Phasing
  • In preparation for a multiwavelength anomalous diffraction (MAD) experiment for the purpose of obtaining experimental crystallographic phases, a suitable atom or set of atoms must be incorporated into the crystal lattice. It is essential that this atom have an absorption edge within the practical range of x-ray wavelengths used for diffraction data collection. Rather than absorption, fluorescence is conventionally measured. This atom or set of atoms may be added exogenously to the native protein molecule (by soaking or cocrystallization methods), incorporated synthetically or incorporated biosynthetically into the protein itself. We chose the last method by substituting selenomethionine into the protein for the native methionine. This was accomplished by inhibiting the expression system's pathway for methionine biosynthesis and adding a suitable amount of selenomethionine to the growth medium for incorporation into the overexpressed protein. One may also use an expression system which is auxotrophic for methionine and similarly provide selenomethionine in the growth medium. This process is described in Doublie [Doublié, [0075] Meth. Enz. 276: 523-530 (1997)].
  • The selenomethionine-incorporated HCV NS5B protein was purified and crystallized in the same manner as the wild-type (sulfur-containing methionine) enzyme. [0076]
  • A MAD experiment was performed at beamline 17-ID-B at the Advanced Photon Source at Argonne National Laboratory as described in Hendrickson and Ogata [Hendrickson & Ogata, [0077] Meth. Enz. 276: 494-523 (1997)]. Briefly, an x-ray fluorescence energy scan was collected from a Se-met NS5B crystal. Data from this scan were used to assign the fluorescence edge and peak to determine the precise wavelengths of x-ray radiation required for the experiment. Complete x-ray diffraction data sets were collected, using the inverse-beam method [Hendrickson & Ogata, Meth. Enz. 276: 494-523 (1997)], at the peak fluorescence (wavelength=0.979 Å), at the fluorescence edge (0.980 Å) and at a low-energy remote wavelength (1.032 Å).
  • Unprocessed diffraction images were indexed and the diffraction intensities integrated using the HKL computer program package [Otwinowski & Minor, [0078] Meth. Enzymol. 276: 307-326 (1997)]. Integrated intensities were reduced to unique data (as amplitides) using the programs of the CCP4 package including SCALA and TRUNCATE [Bailey, Meth. Enzymol. 276: 307-326 (1994); Evans, Joint CP4 and ESF-EACBM Newsletter 33: 22-24 (1997); French & Wilson, Acta Crystallogr. A34: 517-525 (1978)].
  • The selenium atom substructure was deduced using the direct methods structure solution software Shake-and-Bake version 2.0 beta [Miller et al., [0079] Acta Crystallogr. A34: 517-525 (1993); Miller et al., J. Appl. Crystallogr. 27: 613-621 (1994)] using the reduced, unique data from the peak fluorescence wavelength only.
  • The calculated sites for the 22 expected (based on amino acid sequence of the NS5B monomer and the anticipation of two NS5B monomers per asymmetric unit, which is based on calculation of the Matthews coefficient and other crystallographic analyses [Matthews, [0080] J. Mol. Biol. 33: 491-497 (1968)]) were then refined and experimental MAD phases calculated using the software SHARP [de La Fortelle & Bricogne, Meth. Enzymol. 276: 472-494 (1996)]. Subsequent density modification using the program SOLOMON [Abrahams & Leslie, Acta Crystallogr. D52: 30-42 (1996)] resulted in an interpretable electron density map.
  • EXAMPLE 5 Model Building and Refinement
  • After the polypeptide backbone was fit into the experimental electron density using the software O [Jones et al., [0081] Acta Crystallogr. A47: 110-119 (1991)], amino acid side chains were fit into electron density and the HCV NS5B primary sequence was registered onto the three dimensional polypeptide trace. After an initial cycle of manual fitting, the three dimensional coordinates were subjected to coordinate and B-factor refinement using simulated-annealing techniques implemented in the program X-PLOR [Brünger et al., Acta Crystallogr A 46: 585-93 (1990); Karplus et al., Cold Spring Harb Symp Quant Biol 52: 381-90 (1987)]. Iterative cycles of manual rebuilding, placement of solvent molecules, and refinement followed until convergence of the free R-factor to 0.30 [Kleywegt & Brunger, Structure 4:897-904 (1996); Kleywegt & Jones, Structure 3: 535-40 (1995)]. The stereochemical quality of the model was checked and verified at each cycle with the aid of the programs PROCHECK [Laskowski et al., J. Appl. Crystallogr. 26: 283-291 (1993)] and WHATIF [Hooft et al., Nature 381: 272 (1996)].
  • Crystals contain two HCV NS5B monomers per asymmetric unit and belong to space group P2[0082] 12121 with unit cell dimensions 86×105×126 Å. These crystals diffract to at least 1.9 Å resolution. A refined model of HCV NS5B RdRp was produced using data collected from a selenomethionine-incorporated protein. This three-dimensional atomic model contains greater than 95% of the expected scattering matter in the crystal and may be used to solve, using difference Fourier or molecular replacement techniques, the crystal structures of HCV NS5B:ligand complexes where the ligand is a small-molecule inhibitor or substrate of this enzyme. This crystal form is suitable for structure-based drug design due to: (a) only modest concentrations of NaCl and PEG used for crystallization and (b) exposure of the active site to solvent channels. A schematic-representation of the HCV NS5B RdRp structure is shown in FIG. 1(b).
  • FIG. 1([0083] b) contains schematic representations of the HCV NS5B RdRp monomer in a single large image, showing the location of the structural motifs in the three dimensional structure. The conserved structural motifs found in polymerases [Hansen et al., Structure, 5:1109-1122 (1997)] are denoted as lettered dark gray regions; the remainder of the molecule is lighter. The amino acid sequence of these motifs is shown (FIG. 1(a)), above FIG. 1(b) and are:
  • Motif A: This region forms one strand of the central beta-sheet and contributes an aspartate (D) to the active site; [0084]
  • Motif B: This region determines specificity between a NTP and dNTP substrate; [0085]
  • Motif C: This motif contains the sequence motif GDD and is directly implicated in divalent metal binding and nucleotidyl transferase activity; [0086]
  • Motif D: Buttresses the central beta-sheet; and [0087]
  • Motif E: Determines specificity between DNA and RNA template. [0088]
  • These motifs have all individually been shown to be required for catalytic activity [Hansen et al., [0089] Structure, 5:1109-1122 (1997); Joyce & Steitz, Ann. Rev. Biochem. 63:777-822 (1994); Poch et al., EMBO J. 8:3867-3874 (1989); Sousa, Trends Biochem Sci. 21:186-190 (1996)]. The three-dimensional colocalization of the motifs (in the ‘palm’ subdomain) defines the position of the catalytic active site. Additionally, the ‘thumb’ and ‘fingers’ regions (denoted on the Figure), have been shown to bind to the primer strand substrate and template strand substrate, respectively, in other members of the greater polymerase family [Doublie et al., Nature 391:251-258 (1998); Huang et al., Science 282:1669-1675 (1998); Jacobo-Molina et al., Proc. Natl. Acad. Sci. USA 90:6320-632 (1993); Kiefer et al., Nature 391:304-307 (1998), Pelletier et al., Science 264:1891-1903 (1994)].
  • FIG. 1([0090] b) was created using Molscript and Raster3D [Kraulis, J. Appl. Crystallogr. 24:946-950 (1991); Merritt & Bacon, Meth. Enzymol. 276:505-524 (1997)].
  • Table 1 lists the atomic structure coordinates for hepatitis C virus recombinant tNS5B polymerase, as derived by x-ray diffraction from crystals. The specific columns in Table 1 are defined as follows: [0091]
    Column Description
    1 Residue number (using numbering scheme of Table 1)
    2 Residue name, using one-letter code (X = solvent)
    3 Atom name, conventional PDB nomenclature (OW = solvent)
    4 X-coordinate in orthogonal Ångströms, multiplied by 10
    5 Y-coordinate in orthogonal Ångströms, multiplied by 10
    6 Z-coordinate in orthogonal Ångströms, multiplied by 10
    7 B-factor, in Å2
  • The descriptions of the foregoing embodiments of the invention have been presented for purpose of illustration and description. They are not intended to be exhaustive or to limit the invention to the precise forms disclosed, and obviously many modifications and variations are possible in light of the above teaching. The embodiments were chosen and described in order to best explain the principles of the invention to thereby enable others skilled in the art to utilize the invention in various embodiments and with various modifications as are suited to the particular use contemplated. It is intended that the scope of the invention be defined by the claims appended hereto. [0092]
    TABLE I
    7 H N 161 376 196 40
    7 H CA 152 378 208 40
    7 H C 159 374 222 36
    7 H O 152 369 231 32
    7 H CB 138 371 207 42
    7 H CG 129 376 196 44
    7 H ND1 124 368 187 43
    7 H CD2 125 389 193 42
    7 H CE1 117 375 178 46
    7 H NE2 117 388 182 43
    8 H N 172 376 223 33
    8 H CA 178 373 235 31
    8 H C 178 384 245 24
    8 H O 178 395 241 19
    8 H CB 193 369 232 38
    8 H CG 195 356 225 45
    8 H ND1 201 354 213 44
    8 H CD2 190 343 229 45
    8 H CE1 200 342 209 48
    8 H NE2 194 335 219 50
    9 S N 177 380 258 22
    9 S CA 177 391 268 20
    9 S C 189 399 268 18
    9 S O 189 411 271 17
    9 S CB 175 384 282 18
    9 S OG 183 372 283 19
    10 Y N 201 393 265 18
    10 Y CA 214 400 265 21
    10 Y C 223 394 255 20
    10 Y O 222 383 251 20
    10 Y CB 221 399 278 17
    10 Y CG 214 405 291 17
    10 Y CD1 216 419 294 16
    10 Y CD2 206 397 299 19
    10 Y CE1 209 424 305 19
    10 Y CE2 200 403 310 19
    10 Y CZ 201 416 313 17
    10 Y OH 195 421 323 25
    11 T N 233 403 250 22
    11 T CA 243 398 241 25
    11 T C 256 404 248 25
    11 T O 256 415 253 26
    11 T CB 243 404 226 25
    11 T OG1 240 418 226 28
    11 T CG2 232 396 218 26
    12 W N 266 396 249 25
    12 W CA 279 400 256 26
    12 W C 291 401 247 27
    12 W O 293 393 238 28
    12 W CB 281 390 267 20
    12 W CG 269 388 276 20
    12 W CD1 261 378 277 19
    12 W CD2 265 398 286 19
    12 W NE1 252 380 287 19
    12 W CE2 254 392 293 19
    12 W CE3 269 410 291 17
    12 W CZ2 247 398 303 16
    12 W CZ3 262 416 301 21
    12 W CH2 251 410 307 14
    13 T N 299 411 250 28
    13 T CA 312 413 242 28
    13 T C 323 405 248 31
    13 T O 332 400 241 35
    13 T CB 317 428 242 26
    13 T OG1 319 432 256 27
    13 T CG2 307 437 235 26
    14 G N 323 403 261 31
    14 G CA 333 395 267 30
    14 G C 341 404 277 30
    14 G O 350 399 284 31
    15 A N 339 417 277 27
    15 A CA 345 426 286 26
    15 A C 339 422 300 29
    15 A O 327 419 301 29
    15 A CB 343 441 283 22
    16 L N 347 423 310 31
    16 L CA 342 419 324 30
    16 L C 334 429 331 24
    16 L O 336 441 329 25
    16 L CB 354 415 332 30
    16 L CG 363 404 328 33
    16 L CD1 375 403 337 35
    16 L CD2 356 391 328 32
    17 I N 325 425 339 26
    17 I CA 316 433 347 25
    17 I C 326 436 359 25
    17 I O 330 426 366 26
    17 I CB 303 427 353 21
    17 I CG1 294 423 341 19
    17 I CG2 296 436 362 18
    17 I CD1 281 418 344 21
    18 T N 331 448 360 25
    18 T CA 341 451 370 27
    18 T C 336 459 382 28
    18 T O 326 466 382 26
    18 T CB 352 459 363 22
    18 T OG1 347 471 357 23
    18 T CG2 359 451 353 20
    19 P N 343 457 393 30
    19 P CA 339 463 406 33
    19 P C 344 478 406 38
    19 P O 352 482 398 37
    19 P CB 346 455 417 32
    19 P CG 358 450 410 33
    19 P CD 354 447 396 30
    20 C N 339 485 416 43
    20 C CA 343 499 418 46
    20 C C 355 498 428 48
    20 C O 366 497 424 52
    20 C CB 332 508 423 48
    20 C SG 334 525 417 65
    21 A N 351 498 441 47
    21 A CA 361 497 451 45
    21 A C 364 482 454 44
    21 A O 359 474 447 46
    21 A CB 357 504 464 46
    22 A N 372 479 464 44
    22 A CA 375 466 468 42
    22 A C 362 460 473 40
    22 A O 353 467 479 38
    22 A CB 386 465 479 44
    23 E N 361 446 472 37
    23 E CA 349 439 476 35
    23 E C 353 428 486 33
    23 E O 362 421 484 35
    23 E CB 342 433 464 32
    23 E CG 337 442 453 30
    23 E CD 332 435 441 33
    23 E OE1 339 427 435 33
    23 E OE2 320 437 437 33
    24 E N 345 427 497 32
    24 E CA 346 417 507 29
    24 E C 336 406 505 27
    24 E O 324 410 502 28
    24 E CB 344 423 521 30
    24 E CG 354 434 525 39
    24 E CD 351 437 540 41
    24 E OE1 342 445 542 40
    24 E OE2 359 432 548 43
    25 S N 339 394 506 28
    25 S CA 329 383 505 28
    25 S C 327 377 519 26
    25 S O 316 372 522 26
    25 S CB 334 373 495 30
    25 S OG 345 365 500 34
    26 K N 338 377 527 26
    26 K CA 337 370 540 28
    26 K C 332 380 551 20
    26 K O 336 392 551 20
    26 K CB 351 365 544 29
    26 K CG 363 375 544 41
    26 K CD 367 378 529 43
    26 K CE 372 392 528 40
    26 K NZ 370 396 514 41
    27 L N 324 375 560 23
    27 L CA 318 383 571 22
    27 L C 329 390 579 21
    27 L O 337 384 585 23
    27 L CB 310 374 580 23
    27 L CG 302 380 592 16
    27 L CD1 293 391 588 14
    27 L CD2 295 369 599 16
    28 P N 329 404 579 22
    28 P CA 338 411 587 23
    28 P C 335 408 601 23
    28 P O 324 407 605 22
    28 P CB 335 426 583 23
    28 P CG 327 425 571 25
    28 P CD 319 412 572 22
    29 I N 346 407 609 20
    29 I CA 344 403 623 19
    29 I C 350 414 633 23
    29 I O 362 417 632 24
    29 I CB 350 390 627 17
    29 I CG1 342 379 619 20
    29 I CG2 349 387 641 20
    29 I CD1 328 377 622 12
    30 N N 342 419 642 22
    30 N CA 347 429 652 20
    30 N C 344 423 666 16
    30 N O 342 411 667 18
    30 N CB 341 443 650 18
    30 N CG 327 445 653 17
    30 N OD1 320 435 657 20
    30 N ND2 322 457 652 18
    31 A N 345 431 676 19
    31 A CA 342 426 690 20
    31 A C 328 423 693 22
    31 A O 325 415 702 23
    31 A CB 348 436 700 19
    32 L N 318 429 686 23
    32 L CA 304 427 688 23
    32 L C 298 415 681 23
    32 L O 288 410 685 26
    32 L CB 296 440 683 20
    32 L CG 301 453 689 23
    32 L CD1 294 465 683 21
    32 L CD2 298 453 704 29
    33 S N 305 411 670 23
    33 S CA 301 399 662 22
    33 S C 295 387 669 24
    33 S O 284 383 667 24
    33 S CB 312 395 653 18
    33 S OG 316 406 645 17
    34 N N 303 381 678 26
    34 N CA 299 369 685 25
    34 N C 287 369 695 23
    34 N O 281 359 698 22
    34 N CB 312 362 692 29
    34 N CG 322 357 682 35
    34 N OD1 318 351 672 37
    34 N ND2 334 358 685 40
    35 S N 284 381 700 22
    35 S CA 272 382 708 25
    35 S C 259 380 700 27
    35 S O 249 377 705 28
    35 S CB 271 396 715 23
    35 S OG 270 407 706 30
    36 L N 261 382 686 26
    36 L CA 249 379 677 24
    36 L C 250 366 669 24
    36 L O 241 358 669 26
    36 L CB 248 391 668 22
    36 L CG 237 390 656 20
    36 L CD1 223 389 662 22
    36 L CD2 238 401 647 19
    37 L N 262 364 663 23
    37 L CA 263 352 654 25
    37 L C 277 345 655 25
    37 L O 287 351 654 27
    37 L CB 261 356 640 21
    37 L CG 258 346 629 21
    37 L CD1 247 352 619 18
    37 L CD2 270 344 621 22
    38 R N 277 332 658 27
    38 R CA 289 324 659 31
    38 R C 294 317 647 30
    38 R O 306 315 644 27
    38 R CB 289 315 671 38
    38 R CG 289 322 684 47
    38 R CD 286 313 696 57
    38 R NE 294 316 708 68
    38 R CZ 296 307 717 73
    38 R NH1 291 295 717 75
    38 R NH2 304 311 728 75
    39 H N 284 312 639 29
    39 H CA 288 304 627 30
    39 H C 291 314 615 29
    39 H O 284 313 605 32
    39 H CB 276 295 623 28
    39 H CG 273 284 633 28
    39 H ND1 263 275 632 32
    39 H CD2 280 282 645 32
    39 H CE1 263 267 642 33
    39 H NE2 273 271 650 33
    40 H N 302 321 616 26
    40 H CA 306 331 606 29
    40 H C 307 326 591 29
    40 H O 305 334 582 27
    40 H CB 320 337 610 28
    40 H CG 320 342 624 33
    40 H ND1 332 344 632 31
    40 H CD2 310 346 633 33
    40 H CE1 329 348 644 32
    40 H NE2 316 349 645 32
    41 N N 311 313 589 29
    41 N CA 312 308 576 33
    41 N C 299 305 569 34
    41 N O 299 301 557 37
    41 N CB 320 295 577 38
    41 N CG 335 297 581 45
    41 N OD1 340 308 581 47
    41 N ND2 342 286 584 48
    42 M N 288 308 575 35
    42 M CA 275 307 569 33
    42 M C 271 320 561 33
    42 M O 263 319 552 33
    42 M CB 265 304 579 38
    42 M CG 267 292 588 41
    42 M SD 262 275 579 57
    42 M CE 242 278 576 48
    43 V N 278 331 565 28
    43 V CA 275 344 560 26
    43 V C 285 349 549 26
    43 V O 297 348 551 28
    43 V CB 274 354 571 20
    43 V CG1 271 368 565 16
    43 V CG2 262 351 580 20
    44 Y N 280 354 538 25
    44 Y CA 288 359 527 24
    44 Y C 281 370 520 23
    44 Y O 269 372 520 21
    44 Y CB 292 347 518 22
    44 Y CG 280 343 509 25
    44 Y CD1 271 334 514 26
    44 Y CD2 278 /348 496 25
    44 Y CE1 260 330 507 24
    44 Y CE2 267 344 489 22
    44 Y CZ 258 335 494 25
    44 Y OH 246 331 487 27
    45 A N 289 378 513 21
    45 A CA 284 389 504 23
    45 A C 287 384 490 27
    45 A O 297 377 487 30
    45 A CB 290 402 507 16
    46 T N 277 387 481 24
    46 T CA 280 383 467 21
    46 T C 289 394 462 22
    46 T O 289 405 466 24
    46 T CB 267 384 458 15
    46 T OG1 261 397 460 17
    46 T CG2 258 373 462 17
    47 T N 297 390 452 26
    47 T CA 307 400 446 26
    47 T C 308 398 431 25
    47 T O 303 388 425 23
    47 T CB 321 396 453 25
    47 T OG1 330 407 452 33
    47 T CG2 327 384 446 22
    48 S N 314 408 424 26
    48 S CA 315 407 409 26
    48 S C 322 395 404 29
    48 S O 320 391 393 31
    48 S CB 322 420 404 24
    48 S OG 336 419 407 26
    49 R N 329 388 413 29
    49 R CA 336 376 410 27
    49 R C 327 365 405 28
    49 R O 332 355 399 28
    49 R CB 345 371 421 32
    49 R CG 357 380 425 35
    49 R CD 367 374 434 42
    49 R NE 363 374 448 52
    49 R CZ 364 385 456 54
    49 R NH1 369 396 451 55
    49 R NH2 361 384 469 55
    50 S N 314 366 407 26
    50 S CA 304 356 402 26
    50 S C 295 362 392 24
    50 S O 285 356 388 22
    50 S CB 296 350 414 26
    50 S OG 287 360 419 29
    51 A N 298 374 386 25
    51 A CA 290 381 376 26
    51 A C 288 372 364 28
    51 A O 277 372 357 27
    51 A CB 296 394 373 18
    52 G N 299 364 360 30
    52 G CA 299 355 349 27
    52 G C 287 345 350 29
    52 G O 280 343 340 29
    53 L N 286 339 362 29
    53 L CA 276 329 364 30
    53 L C 262 335 363 29
    53 L O 253 329 358 30
    53 L CB 278 324 378 32
    53 L CG 287 312 380 34
    53 L CD1 290 310 394 34
    53 L CD2 281 300 373 35
    54 R N 260 348 368 27
    54 R CA 248 355 367 27
    54 R C 244 357 352 26
    54 R O 233 354 348 23
    54 R CB 248 368 375 26
    54 R CG 235 376 374 26
    54 R CD 223 369 379 28
    54 R NE 223 364 393 34
    54 R CZ 214 357 398 35
    54 R NH1 204 353 391 35
    54 R NH2 215 353 411 31
    55 Q N 254 362 345 28
    55 Q CA 253 365 331 29
    55 Q C 247 353 324 29
    55 Q O 238 354 315 29
    55 Q CB 266 369 324 24
    55 Q CG 271 383 326 25
    55 Q CD 285 386 321 30
    55 Q OE1 287 394 312 30
    55 Q NE2 294 379 327 35
    56 K N 251 341 327 29
    56 K CA 247 329 321 31
    56 K C 232 325 325 34
    56 K O 225 320 316 37
    56 K CB 256 317 325 32
    56 K CG 270 319 320 37
    56 K CD 279 307 324 41
    56 K CE 293 309 317 45
    56 K NZ 291 309 302 44
    57 K N 228 328 337 35
    57 K CA 214 325 341 33
    57 K C 204 335 334 28
    57 K O 194 331 329 33
    57 K CB 212 326 356 34
    57 K CG 221 316 364 44
    57 K CD 217 316 379 49
    57 K CE 227 307 387 49
    57 K NZ 228 294 381 54
    58 V N 207 348 334 26
    58 V CA 199 358 328 24
    58 V C 199 359 313 23
    58 V O 190 366 307 22
    58 V CB 202 372 334 23
    58 V CG1 202 372 349 23
    58 V CG2 216 377 330 22
    59 T N 207 352 306 25
    59 T CA 208 353 291 24
    59 T C 201 341 284 24
    59 T O 206 330 285 24
    59 T CB 223 353 286 23
    59 T OG1 229 364 293 23
    59 T CG2 223 356 271 22
    60 F N 190 344 278 24
    60 F CA 182 334 271 25
    60 F C 173 341 260 23
    60 F O 172 353 260 23
    60 F CB 174 325 280 28
    60 F CG 165 333 291 32
    60 F CD1 152 337 287 31
    60 F CD2 170 335 303 31
    60 F CE1 144 344 297 28
    60 F CE2 162 342 313 34
    60 F CZ 149 346 310 35
    61 D N 168 332 251 26
    61 D CA 159 337 240 29
    61 D C 145 336 245 27
    61 D O 141 326 251 29
    61 D CB 162 328 228 34
    61 D CG 154 332 216 41
    61 D OD1 155 344 211 44
    61 D OD2 146 324 210 45
    62 R N 137 346 242 26
    62 R CA 123 345 246 25
    62 R C 113 346 235 25
    62 R O 115 352 224 23
    62 R CB 119 355 258 23
    62 R CG 125 368 257 26
    62 R CD 139 369 260 21
    62 R NE 142 381 268 25
    62 R CZ 141 393 263 23
    62 R NH1 139 395 250 31
    62 R NH2 141 404 271 29
    63 L N 102 338 237 27
    63 L CA 91 338 227 26
    63 L C 78 341 234 23
    63 L O 76 337 246 25
    63 L CB 90 324 221 28
    63 L CG 103 319 214 30
    63 L CD1 101 304 211 33
    63 L CD2 105 327 201 31
    64 Q N 69 348 228 24
    64 Q CA 56 351 233 20
    64 Q C 45 348 223 21
    64 Q O 45 352 212 18
    64 Q CB 55 366 237 19
    64 Q CG 61 369 250 22
    64 Q CD 58 383 253 23
    64 Q OE1 60 393 245 25
    64 Q NE2 53 386 266 24
    65 V N 34 341 228 22
    65 V CA 23 338 220 23
    65 V C 11 345 228 22
    65 V O 7 341 239 23
    65 V CB 21 322 220 23
    65 V CG1 8 319 214 24
    65 V CG2 33 316 212 23
    66 L N 7 356 222 19
    66 L CA −3 364 227 20
    66 L C −17 361 223 20
    66 L O −20 362 211 21
    66 L CB 0 379 225 18
    66 L CG 11 385 234 17
    66 L CD1 20 375 240 18
    66 L CD2 18 396 228 10
    67 D N −25 357 232 19
    67 D CA −39 353 228 20
    67 D C −50 364 232 17
    67 D O −47 375 236 15
    67 D CB −43 339 234 20
    67 D CG −44 339 249 20
    67 D OD1 −41 349 256 18
    67 D OD2 −47 328 255 28
    68 D N −63 359 230 19
    68 D CA −74 368 233 20
    68 D C −76 372 247 17
    68 D O −79 384 250 17
    68 D CB −87 362 228 23
    68 D CG −88 364 213 22
    68 D OD1 −91 375 208 27
    68 D OD2 −86 354 205 21
    69 H N −73 363 257 17
    69 H CA −74 366 271 19
    69 H C −63 377 274 20
    69 H O −66 387 282 20
    69 H CB −71 354 280 20
    69 H CG −83 344 280 21
    69 H ND1 −81 331 279 20
    69 H CD2 −96 347 282 19
    69 H CE1 −93 325 280 21
    69 H NE2 −102 334 282 22
    70 Y N −52 377 268 19
    70 Y CA −41 387 270 16
    70 Y C −46 400 265 17
    70 Y O −45 410 273 19
    70 Y CB −28 382 263 18
    70 Y CG −17 392 263 19
    70 Y CD1 −16 403 254 20
    70 Y CD2 −7 392 273 18
    70 Y CE1 −5 412 255 19
    70 Y CE2 3 401 274 17
    70 Y CZ 3 411 265 17
    70 Y OH 13 421 266 19
    71 R N −51 401 253 18
    71 R CA −57 414 248 19
    71 R C −69 419 255 16
    71 R O −71 431 256 16
    71 R CB −59 414 232 22
    71 R CG −47 413 224 21
    71 R CD −50 412 209 18
    71 R NE −58 400 206 17
    71 R CZ −52 388 204 18
    71 R NH1 −39 386 204 20
    71 R NH2 −60 377 202 19
    72 D N −78 410 260 18
    72 D CA −90 414 267 18
    72 D C −86 421 280 20
    72 D O −92 431 284 18
    72 D CB −98 401 271 19
    72 D CG −106 396 259 21
    72 D OD1 −108 403 249 23
    72 D OD2 −111 384 260 24
    73 V N −77 415 288 18
    73 V CA −73 420 301 17
    73 V C −66 434 298 17
    73 V O −69 444 305 14
    73 V CB −63 411 308 17
    73 V CG1 −57 417 320 15
    73 V CG2 −70 398 313 15
    74 L N −57 435 288 14
    74 L CA −50 447 285 14
    74 L C −60 458 282 15
    74 L O −58 470 286 15
    74 L CB −40 446 273 16
    74 L CG −33 458 268 16
    74 L CD1 −25 465 279 13
    74 L CD2 −23 454 257 17
    75 K N −71 455 274 17
    75 K CA −81 465 271 18
    75 K C −88 471 283 13
    75 K O −90 482 284 17
    75 K CB −91 460 261 19
    75 K CG −99 472 255 20
    75 K CD −110 467 245 22
    75 K CE −116 479 238 27
    75 K NZ −126 475 229 30
    76 E N −90 462 293 16
    76 E CA −96 466 305 20
    76 E C −87 475 313 17
    76 E O −91 485 319 19
    76 E CB −100 454 314 22
    76 E CG −110 445 307 30
    76 E CD −112 432 314 32
    76 E OE1 −108 431 326 35
    76 E OE2 −116 422 307 35
    77 M N −74 472 313 16
    77 M CA −64 480 321 16
    77 M C −63 494 315 16
    77 M O −63 503 323 15
    77 M CB −51 473 321 17
    77 M CG −50 461 330 18
    77 M SD −34 449 327 20
    77 M CE −19 461 335 20
    78 K N −62 495 302 17
    78 K CA −61 508 296 16
    78 K C −74 516 298 18
    78 K O −72 529 300 17
    78 K CB −59 506 281 17
    78 K CG −46 500 277 16
    78 K CD −43 503 262 23
    78 K CE −33 494 256 30
    78 K NZ −32 497 242 33
    79 A N −86 510 299 20
    79 A CA −98 518 302 19
    79 A C −97 525 316 17
    79 A O −101 537 317 16
    79 A CB −110 509 301 14
    80 K N −91 518 325 18
    80 K CA −88 523 339 18
    80 K C −77 534 338 18
    80 K O −78 545 344 18
    80 K CB −85 512 348 19
    80 K CG −97 504 352 23
    80 K CD −92 492 360 30
    80 K CE −104 484 365 35
    80 K NZ −115 493 371 41
    81 A N −66 531 331 18
    81 A CA −55 540 330 19
    81 A C −59 554 324 21
    81 A O −54 564 326 18
    81 A CB −43 534 321 18
    82 S N −70 553 316 22
    82 S CA −75 565 309 22
    82 S C −81 575 319 21
    82 S O −83 587 316 21
    82 S CB −85 562 298 24
    82 S OG −79 555 288 35
    83 T N −85 571 331 22
    83 T CA −90 580 341 20
    83 T C −79 587 349 19
    83 T O −82 597 356 21
    83 T CB −100 573 351 23
    83 T OG1 −92 563 359 22
    83 T CG2 −110 565 343 22
    84 V N −67 583 348 18
    84 V CA −56 589 355 17
    84 V C −51 602 348 17
    84 V O −51 603 336 21
    84 V CB −43 579 355 16
    84 V CG1 −31 586 361 12
    84 V CG2 −47 566 362 13
    85 K N −48 612 357 17
    85 K CA −43 625 352 19
    85 K C −30 626 360 22
    85 K O −30 626 372 20
    85 K CB −52 637 355 21
    85 K CG −47 650 350 21
    85 K CD −57 661 350 26
    85 K CE −50 674 344 31
    85 K NZ −60 685 343 39
    86 A N −19 627 352 21
    86 A CA −6 629 359 19
    86 A C 0 642 356 22
    86 A O −1 647 345 24
    86 A CB 2 617 355 21
    87 K N 8 647 365 21
    87 K CA 14 660 364 24
    87 K C 29 658 361 22
    87 K O 35 648 365 21
    87 K CB 13 668 376 30
    87 K CG 0 668 383 42
    87 K CD −12 675 375 48
    87 K CE −12 690 376 53
    87 K NZ −2 697 367 56
    88 L N 36 668 355 20
    88 L CA 50 668 352 23
    88 L C 56 674 365 24
    88 L O 51 684 370 26
    88 L CB 52 677 340 24
    88 L CG 64 675 330 24
    88 L CD1 66 661 325 20
    88 L CD2 60 684 318 26
    89 L N 67 668 370 22
    89 L CA 74 674 381 23
    89 L C 84 685 376 23
    89 L O 90 684 366 27
    89 L CB 82 663 389 23
    89 L CG 78 657 402 23
    89 L CD1 63 653 401 18
    89 L CD2 87 646 405 20
    90 S N 86 696 384 23
    90 S CA 95 706 380 23
    90 S C 110 701 383 23
    90 S O 111 690 388 21
    90 S CB 93 719 389 23
    90 S OG 95 716 403 26
    91 V N 120 708 379 25
    91 V CA 134 704 381 26
    91 V C 137 703 396 26
    91 V O 142 693 401 25
    91 V CB 144 712 374 23
    91 V CG1 158 707 376 23
    91 V CG2 141 713 359 28
    92 E N 133 713 403 28
    92 E CA 135 714 418 31
    92 E C 128 702 425 28
    92 E O 134 696 434 27
    92 E CB 131 727 424 34
    92 E CG 118 734 418 47
    92 E CD 121 744 407 52
    92 E OE1 127 741 396 52
    92 E OE2 116 756 409 53
    93 E N 116 699 421 27
    93 E CA 109 687 427 23
    93 E C 116 674 425 21
    93 E O 117 666 434 21
    93 E CB 94 687 423 25
    93 E CG 86 699 427 32
    93 E CD 72 698 423 37
    93 E OE1 69 695 411 39
    93 E OE2 63 700 431 40
    94 A N 120 671 412 21
    94 A CA 127 659 409 19
    94 A C 140 658 416 17
    94 A O 145 648 420 20
    94 A CB 128 657 394 20
    95 C N 147 670 417 18
    95 C CA 160 670 424 20
    95 C C 159 666 439 20
    95 C O 168 659 444 21
    95 C CB 166 684 423 15
    95 C SG 172 689 406 25
    96 K N 149 671 445 23
    96 K CA 146 668 460 24
    96 K C 143 654 462 25
    96 K O 143 650 474 27
    96 K CB 135 677 465 26
    96 K CG 137 692 465 34
    96 K CD 126 700 471 45
    96 K CE 114 700 462 49
    96 K NZ 106 713 464 46
    97 L N 140 646 452 22
    97 L CA 137 632 453 19
    97 L C 150 623 452 16
    97 L O 149 611 453 17
    97 L CB 127 628 443 20
    97 L CG 112 632 445 20
    97 L CD1 105 629 432 17
    97 L CD2 106 624 456 16
    98 T N 161 629 449 22
    98 T CA 174 622 447 21
    98 T C 181 619 460 19
    98 T O 183 628 468 20
    98 T CB 183 632 437 23
    98 T OG1 176 634 425 20
    98 T CG2 197 626 435 18
    99 P N 185 606 462 19
    99 P CA 192 602 474 19
    99 P C 205 610 475 25
    99 P O 212 612 466 25
    99 P CB 195 587 472 17
    99 P CG 183 583 464 18
    99 P CD 182 594 454 17
    100 P N 208 614 488 27
    100 P CA 221 622 490 29
    100 P C 233 615 485 28
    100 P O 243 621 481 32
    100 P CB 221 624 505 28
    100 P CG 207 625 508 28
    100 P CD 201 613 500 28
    101 H N 233 601 485 30
    101 H CA 244 593 480 31
    101 H C 242 586 467 30
    101 H O 248 575 465 30
    101 H CB 249 584 492 38
    101 H CG 256 591 503 46
    101 H ND1 251 593 516 46
    101 H CD2 268 598 503 49
    101 H CE1 259 600 523 50
    101 H NE2 270 603 516 51
    102 S N 234 591 459 28
    102 S CA 231 585 446 25
    102 S C 244 586 437 25
    102 S O 251 596 439 25
    102 S CB 219 593 439 23
    102 S OG 215 587 427 22
    103 A N 247 576 429 23
    103 A CA 259 576 421 21
    103 A C 260 590 413 24
    103 A O 250 594 406 22
    103 A CB 258 565 411 19
    104 K N 272 596 414 23
    104 K CA 274 609 407 24
    104 K C 274 608 392 21
    104 K O 276 597 386 20
    104 K CB 288 615 411 25
    104 K CG 300 606 407 30
    104 K CD 313 614 408 37
    104 K CE 325 605 404 39
    104 K NZ 338 612 405 43
    105 S N 272 619 385 22
    105 S CA 271 620 371 25
    105 S C 285 619 364 28
    105 S O 295 623 370 28
    105 S CB 264 633 367 24
    105 S OG 264 635 353 23
    106 K N 286 614 352 27
    106 K CA 298 613 345 27
    106 K C 302 627 340 27
    106 K O 313 629 335 30
    106 K CB 297 603 333 29
    106 K CG 294 589 336 40
    106 K CD 294 580 323 44
    106 K CE 290 566 326 48
    106 K NZ 293 557 315 50
    107 F N 292 636 341 28
    107 F CA 294 650 336 24
    107 F C 298 661 346 26
    107 F O 294 672 344 27
    107 F CB 282 653 327 25
    107 F CG 278 643 317 23
    107 F CD1 286 643 305 24
    107 F CD2 269 633 319 21
    107 F CE1 283 632 296 23
    107 F CE2 267 623 310 19
    107 F CZ 274 623 299 24
    108 G N 305 657 356 28
    108 G CA 310 667 366 27
    108 G C 301 673 377 26
    108 G O 303 685 380 24
    109 Y N 293 665 383 28
    109 Y CA 284 669 394 23
    109 Y C 278 657 400 21
    109 Y O 278 646 393 22
    109 Y CB 273 679 389 26
    109 Y CG 262 673 380 27
    109 Y CD1 251 666 386 28
    109 Y CD2 263 674 366 25
    109 Y CE1 241 661 378 27
    109 Y CE2 254 668 358 25
    109 Y CZ 243 662 364 27
    109 Y OH 233 656 356 25
    110 G N 274 658 412 22
    110 G CA 268 646 419 23
    110 G C 255 649 426 22
    110 G O 250 660 424 23
    111 A N 250 639 433 22
    111 A CA 237 640 441 22
    111 A C 236 652 450 28
    111 A O 226 658 451 29
    111 A CB 235 627 448 19
    112 K N 247 656 456 34
    112 K CA 247 667 465 35
    112 K C 245 680 457 34
    112 K O 239 690 462 32
    112 K CB 259 668 474 41
    112 K CG 261 656 484 49
    112 K CD 248 655 493 52
    112 K CE 249 643 502 57
    112 K NZ 262 642 511 59
    113 D N 251 680 445 32
    113 D CA 250 692 436 29
    113 D C 236 692 431 26
    113 D O 230 703 429 26
    113 D CB 260 690 425 31
    113 D CG 274 690 429 33
    113 D OD1 278 699 437 36
    113 D OD2 282 681 425 31
    114 V N 230 681 428 26
    114 V CA 216 679 423 24
    114 V C 206 684 434 24
    114 V O 199 694 431 22
    114 V CB 213 664 419 22
    114 V CG1 198 663 417 19
    114 V CG2 221 660 407 18
    115 R N 207 678 446 22
    115 R CA 198 682 457 25
    115 R C 200 697 461 27
    115 R O 190 704 465 27
    115 R CB 200 674 469 25
    115 R CG 198 659 467 22
    115 R CD 200 651 480 25
    115 R NE 193 658 491 25
    115 R CZ 179 657 493 25
    115 R NH1 172 649 485 29
    115 R NH2 173 665 502 26
    116 N N 212 703 459 29
    116 N CA 215 717 462 31
    116 N C 211 726 450 31
    116 N O 212 739 452 28
    116 N CB 230 718 464 36
    116 N CG 234 716 479 43
    116 N OD1 229 724 487 47
    116 N ND2 243 707 482 44
    117 L N 207 721 439 30
    117 L CA 202 728 427 29
    117 L C 213 737 421 29
    117 L O 211 748 416 30
    117 L CB 190 737 431 26
    117 L CG 178 730 438 22
    117 L CD1 167 740 441 24
    117 L CD2 173 718 430 20
    118 S N 226 732 421 29
    118 S CA 237 740 416 31
    118 S C 235 742 401 32
    118 S O 230 733 394 32
    118 S CB 250 733 418 33
    118 S OG 252 722 409 36
    119 S N 239 754 396 33
    119 S CA 238 757 382 33
    119 S C 243 747 372 30
    119 S O 238 744 362 29
    119 S CB 243 771 379 36
    119 S OG 257 773 384 40
    120 K N 255 741 375 31
    120 K CA 261 731 367 31
    120 K C 252 719 365 31
    120 K O 249 715 354 27
    120 K CB 275 727 373 33
    120 K CG 282 717 364 37
    120 K CD 296 715 369 41
    120 K CE 304 706 360 46
    120 K NZ 318 704 365 49
    121 A N 246 714 376 28
    121 A CA 237 702 376 25
    121 A C 224 706 369 26
    121 A O 219 698 360 27
    121 A CB 234 697 390 21
    122 V N 218 717 373 25
    122 V CA 205 721 367 27
    122 V C 206 724 352 27
    122 V O 197 721 344 27
    122 V CB 199 734 375 27
    122 V CG1 189 741 367 28
    122 V CG2 193 729 388 26
    123 N N 217 730 348 28
    123 N CA 219 733 334 28
    123 N C 221 720 326 25
    123 N O 214 719 316 25
    123 N CB 232 742 332 30
    123 N CG 230 756 338 38
    123 N OD1 219 761 339 40
    123 N ND2 241 763 341 42
    124 H N 228 711 331 25
    124 H CA 229 698 325 25
    124 H C 216 690 324 27
    124 H O 214 682 314 24
    124 H CB 240 690 331 21
    124 H CG 242 676 325 24
    124 H ND1 239 664 331 23
    124 H CD2 246 672 313 23
    124 H CE1 241 654 323 23
    124 H NE2 246 659 312 26
    125 I N 209 690 335 26
    125 I CA 196 683 335 22
    125 I C 187 689 324 21
    125 I O 181 681 317 20
    125 I CB 189 685 350 24
    125 I CG1 196 675 360 20
    125 I CG2 174 682 349 20
    125 I CD1 195 680 374 23
    126 H N 187 702 323 22
    126 H CA 179 709 313 26
    126 H C 184 704 298 29
    126 H O 175 703 289 28
    126 H CB 180 724 314 28
    126 H CG 170 730 324 36
    126 H ND1 173 741 331 39
    126 H CD2 158 726 327 39
    126 H CE1 163 744 339 40
    126 H NE2 153 734 337 40
    127 S N 197 702 297 27
    127 S CA 201 697 284 25
    127 S C 197 683 281 23
    127 S O 194 680 269 25
    127 S CB 217 700 282 27
    127 S OG 225 692 290 28
    128 V N 197 675 291 20
    128 V CA 192 661 289 18
    128 V C 178 660 286 20
    128 V O 174 652 277 19
    128 V CB 194 652 302 16
    128 V CG1 191 638 300 9
    128 V CG2 209 654 307 19
    129 W N 169 668 293 21
    129 W CA 155 669 290 21
    129 W C 152 673 276 21
    129 W O 145 667 268 19
    129 W CB 149 679 300 17
    129 W CG 133 679 299 22
    129 W CD1 126 689 294 20
    129 W CD2 124 669 304 21
    129 W NE1 112 686 295 19
    129 W CE2 111 674 301 18
    129 W CE3 126 657 310 17
    129 W CZ2 100 667 305 20
    129 W CZ3 114 649 314 17
    129 W CH2 102 654 311 17
    130 K N 159 684 272 23
    130 K CA 158 690 258 24
    130 K C 161 679 248 24
    130 K O 154 677 238 23
    130 K CB 167 702 256 27
    130 K CG 166 709 243 34
    130 K CD 175 721 242 40
    130 K CE 170 733 251 49
    130 K NZ 180 745 252 52
    131 D N 172 672 251 23
    131 D CA 177 661 242 22
    131 D C 166 650 241 22
    131 D O 165 644 231 20
    131 D CB 190 656 246 23
    131 D CG 196 645 237 21
    131 D OD1 199 648 225 25
    131 D OD2 196 633 240 21
    132 L N 159 647 252 20
    132 L CA 149 637 252 19
    132 L C 137 641 243 19
    132 L O 131 632 237 21
    132 L CB 144 634 266 18
    132 L CG 152 625 276 19
    132 L CD1 144 625 289 16
    132 L CD2 154 612 270 18
    133 L N 134 653 243 20
    133 L CA 123 658 234 20
    133 L C 126 658 220 25
    133 L O 118 656 211 26
    133 L CB 118 672 239 16
    133 L CG 113 674 253 17
    133 L CD1 108 688 254 18
    133 L CD2 102 664 257 13
    134 E N 139 661 217 25
    134 E CA 143 662 203 25
    134 E C 149 650 196 25
    134 E O 148 649 184 28
    134 E CB 153 674 201 29
    134 E CG 146 687 205 39
    134 E CD 154 699 205 44
    134 E OE1 167 698 208 48
    134 E OE2 149 710 203 47
    135 D N 152 639 204 26
    135 D CA 157 627 199 22
    135 D C 149 615 205 23
    135 D O 149 614 217 23
    135 D CB 172 626 203 24
    135 D CG 180 614 197 23
    135 D OD1 173 603 194 21
    135 D OD2 192 615 195 26
    136 T N 143 607 197 21
    136 T CA 134 596 201 20
    136 T C 141 583 197 17
    136 T O 135 572 198 17
    136 T CB 120 598 196 22
    136 T OG1 112 606 205 26
    136 T CG2 112 585 193 26
    137 V N 153 583 192 19
    137 V CA 159 571 187 19
    137 V C 172 566 193 17
    137 V O 173 554 195 20
    137 V CB 160 571 171 20
    137 V CG1 147 574 164 22
    137 V CG2 170 581 167 21
    138 T N 181 575 196 18
    138 T CA 194 571 201 19
    138 T C 195 563 214 20
    138 T O 191 569 225 21
    138 T CB 204 583 202 18
    138 T OG1 201 592 191 17
    138 T CG2 219 578 201 17
    139 P N 200 551 215 22
    139 P CA 201 543 227 22
    139 P C 209 551 238 21
    139 P O 219 557 234 22
    139 P CB 208 530 223 22
    139 P CG 203 528 209 23
    139 P CD 204 543 203 21
    140 I N 204 552 250 21
    140 I CA 211 559 261 20
    140 I C 221 549 268 17
    140 I O 218 537 269 19
    140 I CB 200 565 270 19
    140 I CG1 193 577 263 18
    140 I CG2 206 569 284 18
    140 I CD1 181 582 270 21
    141 D N 232 555 272 19
    141 D CA 242 547 279 19
    141 D C 237 542 293 20
    141 D O 230 549 300 21
    141 D CB 255 555 281 22
    141 D CG 267 547 286 27
    141 D OD1 268 535 282 23
    141 D OD2 275 552 294 36
    142 T N 242 531 296 19
    142 T CA 239 524 309 22
    142 T C 251 518 315 25
    142 T O 261 514 308 25
    142 T CB 228 513 305 23
    142 T OG1 215 518 309 30
    142 T CG2 232 500 311 22
    143 T N 251 518 329 24
    143 T CA 263 511 336 22
    143 T C 258 498 342 20
    143 T O 247 497 347 22
    143 T CB 267 520 348 20
    143 T OG1 272 533 343 19
    143 T CG2 278 513 356 20
    144 I N 266 488 341 15
    144 I CA 263 475 346 18
    144 I C 272 472 358 23
    144 I O 284 473 357 21
    144 I CB 263 463 335 18
    144 I CG1 257 451 341 16
    144 I CG2 277 461 330 21
    144 I CD1 254 440 331 15
    145 M N 266 468 369 22
    145 M CA 274 465 381 24
    145 M C 269 452 388 22
    145 M O 257 448 385 20
    145 M CB 271 476 392 26
    145 M CG 276 490 389 33
    145 M SD 297 491 389 45
    145 M CE 299 510 397 45
    146 A N 278 446 395 21
    146 A CA 274 434 402 22
    146 A C 271 439 416 25
    146 A O 278 448 422 24
    146 A CB 286 424 403 22
    147 K N 259 435 422 27
    147 K CA 255 440 435 27
    147 K C 262 431 446 21
    147 K O 263 419 444 21
    147 K CB 240 439 437 30
    147 K CG 232 448 428 34
    147 K CD 217 445 431 43
    147 K CE 208 452 420 45
    147 K NZ 193 448 422 44
    148 N N 266 438 457 25
    148 N CA 272 431 468 26
    148 N C 260 429 478 23
    148 N O 257 439 485 26
    148 N CB 282 439 475 29
    148 N CG 293 443 466 30
    148 N OD1 296 455 465 33
    148 N ND2 300 434 459 28
    149 E N 255 417 480 26
    149 E CA 244 415 489 28
    149 E C 247 403 498 26
    149 E O 254 394 494 26
    149 E CB 231 413 482 28
    149 E CG 226 424 474 30
    149 E CD 213 422 467 34
    149 E OE1 212 412 459 32
    149 E OE2 204 430 468 39
    150 V N 243 404 511 24
    150 V CA 246 394 521 21
    150 V C 236 383 522 20
    150 V O 224 386 522 23
    150 V CB 249 400 535 20
    150 V CG1 251 390 546 21
    150 V CG2 260 411 535 16
    151 F N 240 370 523 18
    151 F CA 231 359 524 20
    151 F C 237 349 533 24
    151 F O 249 350 537 24
    151 F CB 228 352 510 24
    151 F CG 221 361 500 23
    151 F CD1 208 363 500 24
    151 F CD2 229 368 491 25
    151 F CE1 202 371 490 25
    151 F CE2 224 376 481 25
    151 F CZ 210 378 481 23
    152 C N 229 339 537 25
    152 C CA 233 327 544 28
    152 C C 235 316 534 31
    152 C O 226 315 525 33
    152 C CB 223 324 555 26
    152 C SG 227 308 564 28
    153 V N 245 308 535 33
    153 V CA 248 297 526 39
    153 V C 236 287 525 43
    153 V O 229 284 535 45
    153 V CB 261 290 529 40
    153 V CG1 263 279 519 45
    153 V CG2 272 300 529 39
    154 Q N 234 282 513 49
    154 Q CA 224 272 509 51
    154 Q C 210 277 511 53
    154 Q O 205 284 501 57
    154 Q CB 225 259 518 54
    154 Q CG 239 252 516 60
    154 Q CD 241 241 526 63
    154 Q OE1 241 243 538 63
    154 Q NE2 241 228 521 66
    160 R N 262 288 470 41
    160 R CA 261 302 472 40
    160 R C 255 309 459 40
    160 R O 258 304 448 41
    160 R CB 274 308 476 39
    160 R CG 281 300 486 42
    160 R CD 291 308 495 48
    160 R NE 298 318 487 49
    160 R CZ 309 325 491 51
    160 R NH1 314 323 503 52
    160 R NH2 314 334 483 55
    161 K N 247 319 460 37
    161 K CA 241 327 449 37
    161 K C 251 336 442 34
    161 K O 259 343 448 35
    161 K CB 230 336 454 36
    161 K CG 217 329 460 39
    161 K CD 208 340 465 41
    161 K CE 194 334 468 44
    161 K NZ 193 324 479 47
    162 P N 249 337 428 33
    162 P CA 258 346 421 29
    162 P C 253 360 423 28
    162 P O 241 362 426 27
    162 P CB 256 342 406 29
    162 P CG 250 328 407 29
    162 P CD 241 329 419 31
    163 A N 261 370 422 23
    163 A CA 257 384 424 21
    163 A C 245 387 415 25
    163 A O 244 381 404 24
    163 A CB 269 393 421 18
    164 R N 236 397 419 24
    164 R CA 226 401 410 26
    164 R C 231 413 403 27
    164 R O 240 420 408 27
    164 R CB 213 405 418 30
    164 R CG 205 393 423 38
    164 R CD 191 397 426 44
    164 R NE 191 408 436 52
    164 R CZ 184 420 434 58
    164 R NH1 176 422 424 65
    164 R NH2 184 429 444 59
    165 L N 226 416 391 26
    165 L CA 231 427 383 27
    165 L C 222 439 383 25
    165 L O 210 438 383 29
    165 L CB 234 422 369 30
    165 L CG 247 415 365 30
    165 L CD1 254 408 376 25
    165 L CD2 244 405 353 29
    166 I N 228 451 384 20
    166 I CA 221 464 384 22
    166 I C 225 471 371 23
    166 I O 237 472 368 21
    166 I CB 223 472 397 23
    166 I CG1 216 486 396 25
    166 I CG2 238 475 398 25
    166 I CD1 201 485 401 25
    167 V N 215 476 364 20
    167 V CA 217 484 352 17
    167 V C 211 497 354 16
    167 V O 199 498 356 17
    167 V CB 211 476 340 14
    167 V CG1 211 485 327 15
    167 V CG2 218 463 338 15
    168 F N 218 508 353 12
    168 F CA 213 521 355 16
    168 F C 218 533 346 19
    168 F O 230 532 342 21
    168 F CB 214 526 370 15
    168 F CG 229 526 375 16
    168 F CD1 236 514 378 15
    168 F CD2 236 538 376 16
    168 F CE1 249 514 382 14
    168 F CE2 249 538 380 15
    168 F CZ 256 526 383 9
    169 P N 210 543 343 19
    169 P CA 214 554 334 19
    169 P C 221 564 343 22
    169 P O 221 564 355 25
    169 P CB 201 559 329 16
    169 P CG 192 556 340 17
    169 P CD 195 542 344 18
    170 D N 227 574 337 19
    170 D CA 234 585 344 21
    170 D C 225 593 352 24
    170 D O 213 594 350 27
    170 D CB 241 594 334 21
    170 D CG 250 604 340 19
    170 D OD1 261 599 345 22
    170 D OD2 247 616 341 17
    171 L N 230 600 362 22
    171 L CA 223 609 371 23
    171 L C 214 618 364 23
    171 L O 202 619 368 21
    171 L CB 233 616 381 19
    171 L CG 228 626 391 23
    171 L CD1 217 620 399 23
    171 L CD2 240 631 399 21
    172 G N 219 626 354 23
    172 G CA 210 635 347 23
    172 G C 198 629 341 20
    172 G O 187 636 340 20
    173 V N 199 617 336 19
    173 V CA 188 609 330 19
    173 V C 178 605 341 20
    173 V O 166 605 339 16
    173 V CB 194 597 323 17
    173 V CG1 182 587 318 12
    173 V CG2 202 601 310 14
    174 R N 184 601 352 18
    174 R CA 176 597 364 18
    174 R C 167 608 369 18
    174 R O 155 605 372 19
    174 R CB 184 592 375 18
    174 R CG 190 578 373 21
    174 R CD 194 572 386 23
    174 R NE 208 569 386 33
    174 R CZ 217 577 392 29
    174 R NH1 213 588 399 39
    174 R NH2 230 575 391 36
    175 V N 172 620 369 16
    175 V CA 164 632 374 17
    175 V C 153 634 363 21
    175 V O 141 638 367 18
    175 V CB 172 644 375 15
    175 V CG1 164 656 379 15
    175 V CG2 182 642 387 16
    176 C N 156 632 351 20
    176 C CA 146 634 340 20
    176 C C 135 623 340 17
    176 C O 123 627 337 16
    176 C CB 153 634 326 16
    176 C SG 162 649 322 18
    177 E N 138 611 344 17
    177 E CA 128 600 345 18
    177 E C 118 605 356 19
    177 E O 106 603 354 16
    177 E CB 134 587 350 14
    177 E CG 142 580 340 20
    177 E CD 146 566 345 22
    177 E OE1 138 557 345 20
    177 E OE2 157 565 350 28
    178 K N 123 611 367 20
    178 K CA 114 616 378 20
    178 K C 104 626 373 21
    178 K O 92 625 375 22
    178 K CB 123 622 389 18
    178 K CG 131 612 397 20
    178 K CD 140 619 407 20
    178 K CE 147 610 417 16
    178 K NZ 155 600 410 21
    179 M N 109 637 367 21
    179 M CA 101 647 361 25
    179 M C 90 642 352 24
    179 M O 78 646 353 23
    179 M CB 109 657 353 27
    179 M CG 118 665 362 33
    179 M SD 131 677 351 38
    179 M CE 147 664 351 35
    180 A N 93 633 343 21
    180 A CA 84 627 333 22
    180 A C 74 616 339 23
    180 A O 63 616 335 25
    180 A CB 91 621 321 18
    181 L N 79 607 348 21
    181 L CA 71 596 352 18
    181 L C 68 594 367 17
    181 L O 61 585 371 20
    181 L CB 77 583 346 18
    181 L CG 74 581 331 20
    181 L CD1 86 574 325 14
    181 L CD2 61 573 329 16
    182 Y N 74 602 376 19
    182 Y CA 71 600 390 20
    182 Y C 57 600 394 22
    182 Y O 52 590 401 20
    182 Y CB 79 611 399 22
    182 Y CG 78 608 414 21
    182 Y CD1 86 598 419 20
    182 Y CD2 70 615 422 20
    182 Y CE1 85 594 433 22
    182 Y CE2 69 612 436 23
    182 Y CZ 76 602 441 23
    182 Y OH 76 599 454 25
    183 D N 49 609 390 23
    183 D CA 35 610 393 23
    183 D C 27 598 387 22
    183 D O 19 592 394 16
    183 D CB 29 623 388 26
    183 D CG 16 626 396 25
    183 D OD1 14 621 407 27
    183 D OD2 8 635 390 27
    184 V N 31 594 375 22
    184 V CA 25 582 369 20
    184 V C 28 569 376 19
    184 V O 19 562 379 16
    184 V CB 29 581 354 16
    184 V CG1 26 567 349 15
    184 V CG2 21 591 346 19
    185 V N 41 566 379 16
    185 V CA 44 554 386 15
    185 V C 39 553 400 16
    185 V O 37 543 406 19
    185 V CB 60 551 386 15
    185 V CG1 66 551 371 12
    185 V CG2 67 561 394 17
    186 S N 36 565 406 18
    186 S CA 30 566 419 19
    186 S C 15 564 419 23
    186 S O 9 558 429 25
    186 S CB 33 579 425 16
    186 S OG 47 582 426 18
    187 T N 8 569 409 23
    187 T CA −5 569 408 23
    187 T C −13 558 400 23
    187 T O −22 552 404 21
    187 T CB −10 583 404 25
    187 T OG1 −4 593 412 28
    187 T CG2 −26 584 406 32
    188 L N −7 556 388 22
    188 L CA −13 547 379 21
    188 L C −15 532 383 20
    188 L O −26 526 380 20
    188 L CB −6 547 365 24
    188 L CG −10 539 352 23
    188 L CD1 −4 545 340 25
    188 L CD2 −6 525 353 27
    189 P N −6 526 390 20
    189 P CA −8 512 394 18
    189 P C −20 509 403 18
    189 P O −27 499 401 19
    189 P CB 4 509 402 19
    189 P CG 14 519 397 18
    189 P CD 6 531 396 17
    190 Q N −23 518 413 19
    190 Q CA −35 515 421 21
    190 Q C −48 517 413 21
    190 Q O −58 510 415 20
    190 Q CB −35 523 434 22
    190 Q CG −46 520 444 30
    190 Q CD −59 526 441 31
    190 Q OE1 −60 538 437 30
    190 Q NE2 −70 518 443 31
    191 V N −48 527 404 19
    191 V CA −60 530 396 21
    191 V C −63 518 387 24
    191 V O −75 514 386 25
    191 V CB −58 543 388 16
    191 V CG1 −70 545 378 17
    191 V CG2 −58 555 398 16
    192 V N −53 512 381 20
    192 V CA −54 501 371 19
    192 V C −58 488 377 24
    192 V O −65 480 372 19
    192 V CB −41 500 362 19
    192 V CG1 −42 487 354 17
    192 V CG2 −40 512 353 19
    193 M N −52 485 389 25
    193 M CA −53 472 395 25
    193 M C −62 471 408 22
    193 M O −64 461 414 21
    193 M CB −39 466 398 26
    193 M CG −29 470 387 32
    193 M SD −11 462 389 33
    193 M CE −17 449 404 19
    194 G N −66 483 413 21
    194 G CA −73 484 425 23
    194 G C −66 478 437 27
    194 G O −54 480 439 28
    195 S N −74 470 445 25
    195 S CA −69 463 457 23
    195 S C −58 453 454 21
    195 S O −51 448 464 23
    195 S CB −80 456 464 24
    195 S OG −87 447 456 29
    196 S N −55 449 442 21
    196 S CA −45 439 438 22
    196 S C −31 445 438 20
    196 S O −21 438 438 21
    196 S CB −48 434 424 19
    196 S OG −59 425 425 26
    197 Y N −30 459 439 19
    197 Y CA −17 465 439 19
    197 Y C −11 464 453 19
    197 Y O −15 471 462 21
    197 Y CB −18 480 435 14
    197 Y CG −4 486 434 13
    197 Y CD1 5 480 427 15
    197 Y CD2 −2 499 440 14
    197 Y CE1 18 487 426 14
    197 Y CE2 9 505 439 18
    197 Y CZ 19 499 431 15
    197 Y OH 31 506 430 16
    198 G N −1 456 455 21
    198 G CA 4 454 468 21
    198 G C 11 465 475 19
    198 G O 10 467 487 20
    199 F N 18 474 468 19
    199 F CA 25 485 474 18
    199 F C 16 496 481 21
    199 F O 21 506 486 19
    199 F CB 35 492 464 19
    199 F CG 46 482 460 16
    199 F CD1 55 477 469 19
    199 F CD2 47 478 446 18
    199 F CE1 66 469 465 17
    199 F CE2 58 470 442 16
    199 F CZ 67 465 451 17
    200 Q N 3 495 480 20
    200 Q CA −5 505 486 20
    200 Q C −7 502 501 20
    200 Q O −12 510 509 21
    200 Q CB −18 507 479 20
    200 Q CG −28 495 481 21
    200 Q CD −40 495 473 20
    200 Q OE1 −49 504 474 18
    200 Q NE2 −42 486 464 17
    201 Y N −3 490 505 21
    201 Y CA −5 485 518 19
    201 Y C 6 485 527 23
    201 Y O 17 482 523 22
    201 Y CB −10 470 518 17
    201 Y CG −22 467 509 16
    201 Y CD1 −34 475 511 18
    201 Y CD2 −22 457 500 18
    201 Y CE1 −45 472 504 21
    201 Y CE2 −34 454 492 22
    201 Y CZ −45 462 494 24
    201 Y OH −57 459 487 21
    202 S N 4 487 540 25
    202 S CA 14 487 550 21
    202 S C 14 472 554 18
    202 S O 4 465 550 20
    202 S CB 10 495 563 23
    202 S OG 0 489 570 23
    203 P N 24 466 560 20
    203 P CA 23 452 563 20
    203 P C 10 447 570 19
    203 P O 5 436 567 21
    203 P CB 36 450 572 19
    203 P CG 45 460 567 17
    203 P CD 36 472 566 18
    204 G N 4 455 579 22
    204 G CA −7 452 586 21
    204 G C −19 452 576 23
    204 G O −27 443 577 25
    205 Q N −19 462 567 23
    205 Q CA −30 463 557 22
    205 Q C −29 452 547 24
    205 Q O −39 448 541 27
    205 Q CB −29 476 551 20
    205 Q CG −33 488 560 22
    205 Q CD −30 501 554 24
    205 Q OE1 −20 503 547 27
    205 Q NE2 −38 511 557 23
    206 R N −17 447 545 24
    206 R CA −15 436 535 21
    206 R C −20 423 541 21
    206 R O −26 415 534 19
    206 R CB 0 434 532 21
    206 R CG 3 422 525 20
    206 R CD 18 420 523 25
    206 R NE 21 417 510 34
    206 R CZ 21 405 505 32
    206 R NH1 19 394 513 41
    206 R NH2 22 403 492 31
    207 V N −18 421 554 23
    207 V CA −23 409 561 23
    207 V C −38 410 562 20
    207 V O −45 400 560 20
    207 V CB −17 409 576 24
    207 V CG1 −23 397 583 24
    207 V CG2 −2 408 576 22
    208 E N −43 421 564 19
    208 E CA −58 423 565 23
    208 E C −64 420 552 27
    208 E O −74 413 551 28
    208 E CB −60 438 569 23
    208 E CG −75 442 569 30
    208 E CD −77 456 574 37
    208 E OE1 −72 465 568 40
    208 E OE2 −84 457 585 43
    209 F N −58 425 541 26
    209 F CA −63 422 528 24
    209 F C −63 407 524 24
    209 F O −73 401 519 25
    209 F CB −55 430 517 28
    209 F CG −59 427 503 32
    209 F CD1 −71 432 498 31
    209 F CD2 −52 418 495 30
    209 F CE1 −76 428 485 34
    209 F CE2 −56 414 482 31
    209 F CZ −68 419 477 33
    210 L N −52 400 527 22
    210 L CA −51 386 524 21
    210 L C −61 377 532 25
    210 L O −67 368 527 25
    210 L CB −37 381 527 22
    210 L CG −26 384 517 21
    210 L CD1 −12 383 524 20
    210 L CD2 −27 376 505 18
    211 V N −62 381 545 27
    211 V CA −72 374 554 26
    211 V C −86 376 550 23
    211 V O −94 366 548 21
    211 V CB −70 379 569 28
    211 V CG1 −82 375 578 25
    211 V CG2 −57 375 575 28
    212 N N −90 388 547 24
    212 N CA −104 391 542 27
    212 N C −107 384 529 30
    212 N O −117 378 527 34
    212 N CB −106 406 541 23
    212 N CG −108 412 555 26
    212 N CD1 −112 405 565 29
    212 N ND2 −106 425 556 24
    213 T N −97 384 520 25
    213 T CA −99 377 507 24
    213 T C −100 362 509 23
    213 T O −109 356 503 28
    213 T CB −86 379 497 22
    213 T OG1 −85 393 495 19
    213 T CG2 −88 372 485 22
    214 W N −92 357 518 22
    214 W CA −93 342 521 25
    214 W C −106 339 526 30
    214 W O −112 328 523 31
    214 W CB −82 339 531 21
    214 W CG −80 324 533 22
    214 W CD1 −85 316 542 23
    214 W CD2 −71 316 524 24
    214 W NE1 −80 303 541 23
    214 W CE2 −72 303 530 24
    214 W CE3 −64 318 513 20
    214 W CZ2 −65 292 524 23
    214 W CZ3 −57 307 508 15
    214 W CH2 −57 294 513 20
    215 K N −112 348 534 32
    215 K CA −125 346 541 36
    215 K C −137 348 531 37
    215 K O −147 342 533 38
    215 K CB −127 356 552 33
    215 K CG −121 353 565 35
    215 K CD −125 364 575 39
    215 K CE −120 361 589 41
    215 K NZ −123 372 598 44
    216 S N −134 355 520 37
    216 S CA −145 357 510 36
    216 S C −147 345 501 33
    216 S O −157 345 494 36
    216 S CB −142 370 502 34
    216 S OG −131 368 493 34
    217 K N −139 335 502 31
    217 K CA −141 323 493 34
    217 K C −148 312 502 39
    217 K O −144 310 513 39
    217 K CB −127 318 488 31
    217 K CG −117 328 483 29
    217 K CD −123 336 471 24
    217 K CE −113 347 467 20
    217 K NZ −119 358 459 20
    218 K N −158 306 496 40
    218 K CA −165 295 502 42
    218 K C −156 284 506 43
    218 K O −158 277 517 45
    218 K CB −176 289 493 46
    218 K CG −184 300 486 53
    218 K CD −196 293 478 55
    218 K CE −202 302 467 57
    218 K NZ −194 302 454 57
    219 N N −146 282 498 43
    219 N CA −136 271 500 44
    219 N C −123 277 493 42
    219 N O −120 273 482 43
    219 N CB −141 258 494 48
    219 N CG −131 247 496 57
    219 N OD1 −125 245 507 62
    219 N ND2 −128 239 486 63
    220 P N −116 286 500 39
    220 P CA −103 292 495 36
    220 P C −92 282 492 31
    220 P O −90 271 498 32
    220 P CB −100 302 505 35
    220 P CG −104 296 518 37
    220 P CD −117 290 514 37
    221 M N −84 286 482 28
    221 M CA −72 279 478 26
    221 M C −63 291 473 25
    221 M O −68 300 468 22
    221 M CB −75 269 467 28
    221 M CG −62 262 461 32
    221 M SD −52 273 448 35
    221 M CE −56 263 430 39
    222 G N −50 290 477 22
    222 G CA −41 301 473 22
    222 G C −28 295 468 20
    222 G O −25 283 471 21
    223 F N −20 303 460 22
    223 F CA −7 299 456 21
    223 F C 0 311 452 22
    223 F O −4 322 450 23
    223 F CB −8 289 443 22
    223 F CG −13 296 431 24
    223 F CD1 −5 301 422 22
    223 F CD2 −27 296 428 25
    223 F CE1 −9 307 410 26
    223 F CE2 −32 302 416 27
    223 F CZ −23 308 407 23
    224 S N 13 309 453 22
    224 S CA 22 320 450 22
    224 S C 29 316 437 19
    224 S O 29 304 434 19
    224 S CB 33 322 461 18
    224 S OG 40 310 464 19
    225 Y N 32 325 429 20
    225 Y CA 38 322 416 25
    225 Y C 52 329 416 23
    225 Y O 53 341 419 24
    225 Y CB 30 326 404 25
    225 Y CG 35 320 390 25
    225 Y CD1 33 307 387 22
    225 Y CD2 43 328 382 26
    225 Y CE1 38 301 375 23
    225 Y CE2 48 323 370 20
    225 Y CZ 46 309 367 20
    225 Y OH 51 304 355 19
    226 D N 62 321 412 26
    226 D CA 76 327 411 28
    226 D C 81 325 397 24
    226 D O 82 314 392 22
    226 D CB 85 320 421 32
    226 D CG 100 323 419 34
    226 D OD1 103 335 418 37
    226 D OD2 108 314 418 38
    227 T N 83 336 390 23
    227 T CA 89 336 377 25
    227 T C 104 336 377 25
    227 T O 110 344 384 26
    227 T CB 84 349 369 29
    227 T OG1 70 349 368 23
    227 T CG2 90 349 354 22
    228 R N 110 327 370 27
    228 R CA 124 325 369 32
    228 R C 131 338 362 33
    228 R O 128 340 351 38
    228 R CB 128 313 360 35
    228 R CG 142 313 355 45
    228 R CD 143 303 343 54
    228 R NE 143 289 348 64
    228 R CZ 133 280 344 65
    228 R NH1 123 284 336 65
    228 R NH2 134 268 349 64
    229 C N 138 345 370 31
    229 C CA 145 357 365 31
    229 C C 135 366 357 29
    229 C O 137 369 345 26
    229 C CB 157 353 357 33
    229 C SG 167 366 351 47
    230 F N 125 371 364 25
    230 F CA 114 380 358 23
    230 F C 120 391 349 22
    230 F O 115 392 338 21
    230 F CB 105 386 369 21
    230 F CG 93 393 363 17
    230 F CD1 93 406 359 13
    230 F CD2 81 386 363 21
    230 F CE1 81 412 355 15
    230 F CE2 69 392 358 16
    230 F CZ 69 405 354 13
    231 D N 130 398 354 20
    231 D CA 136 409 346 20
    231 D C 140 405 332 18
    231 D O 138 412 322 17
    231 D CB 148 415 353 22
    231 D CG 144 426 363 23
    231 D OD1 132 427 367 23
    231 D OD2 153 434 367 20
    232 S N 145 393 330 18
    232 S CA 150 388 317 22
    232 S C 138 382 309 24
    232 S O 140 381 296 26
    232 S CB 160 377 319 24
    232 S OG 172 383 323 28
    233 T N 127 379 315 25
    233 T CA 115 374 307 21
    233 T C 108 386 301 19
    233 T O 99 384 292 18
    233 T CB 106 365 316 21
    233 T OG1 99 374 326 19
    233 T CG2 113 354 323 21
    234 V N 110 398 306 15
    234 V CA 104 410 300 15
    234 V C 109 414 286 19
    234 V O 121 417 285 19
    234 V CB 105 422 310 14
    234 V CG1 100 435 304 13
    234 V CG2 98 418 323 15
    235 T N 101 413 277 18
    235 T CA 103 415 262 17
    235 T C 101 429 258 17
    235 T O 95 437 265 15
    235 T CB 95 406 254 17
    235 T OG1 81 410 255 19
    235 T CG2 96 391 259 14
    236 E N 105 432 245 17
    236 E CA 102 446 239 16
    236 E C 87 448 238 9
    236 E O 83 459 240 11
    236 E CB 109 447 225 14
    236 E CG 106 461 219 21
    236 E CD 113 462 205 26
    236 E OE1 125 458 204 29
    236 E OE2 108 469 196 28
    237 N N 80 438 235 11
    237 N CA 65 439 234 17
    237 N C 60 444 248 17
    237 N O 54 454 249 17
    237 N CB 59 425 230 16
    237 N CG 44 425 233 23
    237 N OD1 36 431 225 22
    237 N ND2 40 419 244 18
    238 D N 64 437 258 19
    238 D CA 60 440 272 17
    238 D C 63 455 276 16
    238 D O 54 461 280 20
    238 D CB 68 431 282 20
    238 D CG 64 417 281 19
    238 D OD1 53 414 275 21
    238 D OD2 71 408 286 20
    239 I N 75 459 273 16
    239 I CA 79 473 275 14
    239 I C 71 483 267 14
    239 I O 67 494 272 16
    239 I CB 94 475 274 10
    239 I CG1 102 468 285 16
    239 I CG2 98 490 274 8
    239 I CD1 114 460 280 15
    240 R N 67 480 255 19
    240 R CA 59 489 246 19
    240 R C 44 489 251 13
    240 R O 38 499 251 14
    240 R CB 60 485 232 18
    240 R CG 73 488 225 22
    240 R CD 73 485 210 24
    240 R NE 86 488 204 20
    240 R CZ 91 500 201 17
    240 R NH1 85 511 204 17
    240 R NH2 104 500 197 19
    241 V N 39 477 256 15
    241 V CA 26 476 261 14
    241 V C 25 485 274 15
    241 V O 16 493 276 17
    241 V CB 22 462 264 12
    241 V CG1 9 461 273 18
    241 V CG2 19 454 251 11
    242 E N 36 485 282 19
    242 E CA 37 494 293 15
    242 E C 36 509 289 14
    242 E O 29 517 296 13
    242 E CB 50 492 301 11
    242 E CG 51 479 308 15
    242 E CD 65 475 311 18
    242 E OE1 74 483 311 20
    242 E OE2 67 463 314 24
    243 E N 42 512 279 18
    243 E CA 42 526 275 17
    243 E C 28 530 270 14
    243 E O 23 541 272 14
    243 E CB 52 529 264 16
    243 E CG 55 544 262 20
    243 E CD 56 548 248 25
    243 E OE1 62 541 240 33
    243 E OE2 51 559 244 25
    244 S N 21 521 263 17
    244 S CA 7 524 258 19
    244 S C −1 526 270 20
    244 S O −10 535 269 20
    244 S CB 2 513 249 16
    244 S OG 0 501 256 21
    245 I N 0 519 281 21
    245 I CA −7 521 293 16
    245 I C −5 535 299 18
    245 I O −14 542 301 19
    245 I CB −5 510 303 16
    245 I CG1 −7 496 296 13
    245 I CG2 −13 512 316 14
    245 I CD1 −3 484 304 18
    246 Y N 7 538 300 19
    246 Y CA 11 552 306 18
    246 Y C 5 562 297 20
    246 Y O 0 573 301 20
    246 Y CB 26 554 306 17
    246 Y CG 34 544 313 19
    246 Y CD1 30 536 323 18
    246 Y CD2 48 542 309 17
    246 Y CE1 38 527 330 20
    246 Y CE2 56 533 315 19
    246 Y CZ 51 525 325 19
    246 Y OH 59 515 331 19
    247 Q N 5 560 283 19
    247 Q CA 0 570 274 20
    247 Q C −14 572 274 21
    247 Q O −19 581 268 21
    247 Q CB 5 567 260 20
    247 Q CG 20 569 257 19
    247 Q CD 26 583 258 19
    247 Q OE1 18 593 260 21
    247 Q NE2 39 585 257 22
    248 C N −21 563 281 22
    248 C CA −36 564 283 21
    248 C C −39 576 292 21
    248 C O −50 582 291 26
    248 C CB −42 551 288 19
    248 C SG −43 538 276 22
    249 C N −30 578 302 20
    249 C CA −32 589 311 19
    249 C C −34 603 305 22
    249 C O −31 604 293 26
    249 C CB −20 590 321 17
    249 C SG −17 575 330 21
    250 D N −40 612 312 19
    250 D CA −41 626 307 21
    250 D C −28 632 311 20
    250 D O −26 635 323 22
    250 D CB −53 632 315 25
    250 D CG −55 647 311 27
    250 D OD1 −46 653 306 34
    250 D OD2 −66 652 314 34
    251 L N −19 634 301 23
    251 L CA −6 640 303 21
    251 L C −3 653 294 22
    251 L O −9 655 284 23
    251 L CB 4 630 300 18
    251 L CG 3 616 306 20
    251 L CD1 9 606 296 20
    251 L CD2 11 616 319 22
    252 A N 5 661 299 23
    252 A CA 10 672 291 26
    252 A C 17 667 279 29
    252 A O 24 656 280 28
    252 A CB 20 681 300 24
    253 P N 16 673 267 31
    253 P CA 22 668 255 29
    253 P C 38 667 257 26
    253 P O 44 658 251 23
    253 P CB 19 679 245 32
    253 P CG 5 683 249 31
    253 P CD 7 684 264 32
    254 E N 44 675 265 29
    254 E CA 58 674 268 27
    254 E C 62 662 276 27
    254 E O 72 656 274 28
    254 E CB 62 687 276 28
    254 E CG 78 688 278 31
    254 E CD 82 700 285 34
    254 E OE1 75 705 294 41
    254 E OE2 92 706 281 38
    255 A N 52 657 284 24
    255 A CA 55 645 292 22
    255 A C 52 632 283 18
    255 A O 59 622 284 18
    255 A CB 45 644 304 20
    256 R N 43 633 273 19
    256 R CA 40 622 264 19
    256 R C 53 620 256 17
    256 R O 56 608 253 18
    256 R CB 29 625 255 18
    256 R CG 16 628 261 21
    256 R CD 5 628 251 24
    256 R NE −8 629 258 26
    256 R CZ −14 619 263 24
    256 R NH1 −8 607 264 23
    256 R NH2 −26 621 269 23
    257 Q N 59 631 252 18
    257 Q CA 71 631 243 21
    257 Q C 83 625 251 16
    257 Q O 89 615 247 17
    257 Q CB 75 645 238 19
    257 Q CG 87 645 229 21
    257 Q CD 85 639 215 22
    257 Q OE1 75 632 213 23
    257 Q NE2 94 642 206 28
    258 A N 84 630 263 19
    258 A CA 95 625 272 17
    258 A C 93 610 275 17
    258 A O 103 602 276 18
    258 A CB 96 633 285 15
    259 I N 81 605 277 16
    259 I CA 78 591 280 15
    259 I C 81 582 268 19
    259 I O 86 571 269 19
    259 I CB 64 589 285 18
    259 I CG1 62 596 299 17
    259 I CG2 61 574 287 18
    259 I CD1 48 597 304 19
    260 K N 77 587 256 18
    260 K CA 79 580 244 19
    260 K C 94 578 242 14
    260 K O 99 567 239 14
    260 K CB 73 587 232 22
    260 K CG 76 582 218 23
    260 K CD 67 589 208 27
    260 K CE 70 585 194 37
    260 K NZ 82 592 189 40
    261 S N 101 589 243 16
    261 S CA 116 590 242 17
    261 S C 123 580 252 18
    261 S O 131 572 247 15
    261 S CB 120 604 243 16
    261 S OG 134 606 240 24
    262 L N 120 581 265 17
    262 L CA 126 573 275 15
    262 L C 123 558 272 14
    262 L O 132 550 274 15
    262 L CB 121 576 289 14
    262 L CG 127 589 296 16
    262 L CD1 119 593 308 14
    262 L CD2 142 587 299 16
    263 T N 111 555 267 14
    263 T CA 108 542 263 14
    263 T C 117 536 252 14
    263 T O 122 525 253 18
    263 T CB 93 540 259 16
    263 T OG1 85 543 271 19
    263 T CG2 90 525 255 12
    264 E N 118 544 241 16
    264 E CA 126 540 230 18
    264 E C 141 538 233 16
    264 E O 147 528 232 20
    264 E CB 124 550 218 19
    264 E CG 111 551 211 29
    264 E CD 105 539 204 30
    264 E OE1 113 530 200 31
    264 E OE2 93 538 203 35
    265 R N 146 549 238 16
    265 R CA 160 551 241 15
    265 R C 165 544 253 19
    265 R O 177 540 254 20
    265 R CB 163 566 242 13
    265 R CG 158 573 230 12
    265 R CD 161 588 231 11
    265 R NE 175 591 233 16
    265 R CZ 180 603 235 15
    265 R NH1 172 613 235 16
    265 R NH2 193 604 236 18
    266 L N 157 542 264 18
    266 L CA 162 536 276 17
    266 L C 155 523 281 16
    266 L O 161 512 282 14
    266 L CB 162 546 288 16
    266 L CG 166 543 302 14
    266 L CD1 180 538 303 15
    266 L CD2 163 555 310 13
    267 Y N 142 523 282 17
    267 Y CA 134 512 287 16
    267 Y C 134 499 279 15
    267 Y O 136 488 285 15
    267 Y CB 120 516 291 16
    267 Y CG 119 528 300 17
    267 Y CD1 130 529 310 14
    267 Y CD2 109 537 300 13
    267 Y CE1 130 540 319 15
    267 Y CE2 109 548 309 14
    267 Y CZ 119 549 319 16
    267 Y OH 120 559 328 14
    268 I N 133 500 266 15
    268 I CA 133 488 258 15
    268 I C 147 481 258 15
    268 I O 147 469 257 15
    268 I CB 128 492 243 20
    268 I CG1 114 496 243 20
    268 I CG2 131 481 233 24
    268 I CD1 109 502 230 25
    269 G N 158 489 258 17
    269 G CA 171 482 257 14
    269 G C 182 493 256 12
    269 G O 179 505 256 13
    270 G N 194 488 255 15
    270 G CA 205 497 255 16
    270 G C 219 491 258 17
    270 G O 220 480 263 17
    271 P N 230 498 254 19
    271 P CA 243 493 257 20
    271 P C 247 493 272 19
    271 P O 243 501 279 15
    271 P CB 253 502 248 19
    271 P CG 246 515 249 23
    271 P CD 231 511 247 20
    272 L N 254 482 276 21
    272 L CA 259 480 289 20
    272 L C 274 484 290 22
    272 L O 282 477 284 25
    272 L CB 256 465 293 18
    272 L CG 242 460 291 14
    272 L CD1 242 445 291 10
    272 L CD2 233 466 301 19
    273 T N 277 493 299 21
    273 T CA 291 498 300 22
    273 T C 296 495 315 24
    273 T O 290 498 325 24
    273 T CB 292 513 298 23
    273 T OG1 288 516 284 26
    273 T CG2 307 518 300 24
    274 N N 307 487 316 22
    274 N CA 313 484 329 19
    274 N C 319 497 336 20
    274 N O 320 507 330 21
    274 N CB 323 472 329 19
    274 N CG 337 476 323 15
    274 N OD1 342 487 323 18
    274 N ND2 345 466 320 14
    275 S N 323 495 349 23
    275 S CA 329 507 356 24
    275 S C 342 513 351 27
    275 S O 345 524 355 28
    275 S CB 330 503 371 29
    275 S OG 340 493 373 29
    276 K N 349 505 342 28
    276 K CA 361 510 337 29
    276 K C 359 517 323 29
    276 K O 368 523 317 27
    276 K CB 371 499 335 31
    276 K CG 376 493 348 37
    276 K CD 387 483 346 43
    276 K CE 384 472 337 48
    276 K NZ 394 461 335 49
    277 G N 346 518 319 30
    277 G CA 342 524 307 27
    277 G C 343 515 294 27
    277 G O 342 520 283 30
    278 Q N 344 502 296 27
    278 Q CA 344 493 285 28
    278 Q C 330 487 282 30
    278 Q O 322 484 291 25
    278 Q CB 353 481 287 35
    278 Q CG 367 484 292 41
    278 Q CD 374 471 296 46
    278 Q OE1 375 467 307 47
    278 Q NE2 380 465 286 49
    279 N N 326 486 269 27
    279 N CA 314 480 266 25
    279 N C 313 465 268 25
    279 N O 320 457 262 23
    279 N CB 311 483 251 28
    279 N CG 298 477 246 31
    279 N OD1 298 470 236 36
    279 N ND2 287 479 253 36
    280 C N 304 461 277 21
    280 C CA 302 447 281 22
    280 C C 292 440 272 19
    280 C O 291 427 272 19
    280 C CB 297 445 295 24
    280 C SG 310 451 307 33
    281 G N 283 447 265 21
    281 G CA 273 441 257 20
    281 G C 261 449 254 18
    281 G O 261 462 255 17
    282 Y N 249 442 253 21
    282 Y CA 237 449 250 18
    282 Y C 225 442 257 18
    282 Y O 224 430 257 20
    282 Y CB 234 449 235 19
    282 Y CG 226 461 231 21
    282 Y CD1 231 473 229 16
    282 Y CD2 212 460 228 23
    282 Y CE1 224 484 225 20
    282 Y CE2 204 470 224 15
    282 Y CZ 210 483 222 21
    282 Y OH 202 493 219 26
    283 R N 216 450 263 20
    283 R CA 204 446 270 19
    283 R C 191 448 262 22
    283 R O 190 459 255 24
    283 R CB 204 453 283 22
    283 R CG 190 454 290 22
    283 R CD 191 466 299 21
    283 R NE 178 472 299 29
    283 R CZ 175 485 295 21
    283 R NH1 184 493 291 16
    283 R NH2 162 489 295 27
    284 R N 182 438 262 23
    284 R CA 170 439 255 24
    284 R C 158 434 264 22
    284 R O 149 428 260 25
    284 R CB 170 431 242 21
    284 R CG 180 437 231 28
    284 R CD 179 429 218 35
    284 R NE 192 431 211 45
    284 R CZ 194 441 203 53
    284 R NH1 185 451 201 54
    284 R NH2 206 442 197 55
    285 C N 160 437 277 20
    285 C CA 150 432 287 17
    285 C C 149 443 297 11
    285 C O 155 454 295 13
    285 C CB 154 419 293 20
    285 C SG 170 419 302 16
    286 R N 142 441 308 14
    286 R CA 141 451 318 15
    286 R C 154 455 325 16
    286 R O 161 446 329 17
    286 R CB 131 447 329 17
    286 R CG 131 455 342 14
    286 R CD 120 467 341 17
    286 R NE 107 461 341 20
    286 R CZ 97 464 333 18
    286 R NH1 99 474 324 21
    286 R NH2 86 458 333 19
    287 A N 156 468 326 16
    287 A CA 168 474 333 13
    287 A C 163 474 348 18
    287 A O 152 478 351 17
    287 A CB 171 488 329 10
    288 S N 172 469 357 19
    288 S CA 169 469 371 21
    288 S C 170 482 378 20
    288 S O 164 484 389 23
    288 S CB 177 458 378 23
    288 S OG 191 462 377 27
    289 G N 177 492 372 18
    289 G CA 179 505 378 14
    289 G C 172 517 372 16
    289 G O 179 527 370 17
    290 V N 159 516 369 17
    290 V CA 152 527 363 16
    290 V C 139 530 372 16
    290 V O 135 521 379 15
    290 V CB 148 526 348 13
    290 V CG1 161 527 339 13
    290 V CG2 141 513 345 8
    291 L N 134 542 370 17
    291 L CA 122 546 378 18
    291 L C 110 537 375 20
    291 L O 103 533 385 20
    291 L CB 118 560 375 13
    291 L CG 107 566 383 17
    291 L CD1 109 565 398 18
    291 L CD2 105 581 380 19
    292 T N 109 532 363 20
    292 T CA 98 523 360 19
    292 T C 99 508 362 19
    292 T O 90 501 359 19
    292 T CB 94 525 345 18
    292 T OG1 106 524 337 20
    292 T CG2 88 539 342 16
    293 T N 110 504 368 15
    293 T CA 112 490 371 14
    293 T C 101 483 379 14
    293 T O 95 473 376 16
    293 T CB 127 487 377 17
    293 T OG1 137 492 369 21
    293 T CG2 129 472 380 14
    294 S N 97 490 390 14
    294 S CA 86 485 399 15
    294 S C 73 485 392 15
    294 S O 66 475 391 14
    294 S CB 86 493 412 14
    294 S OG 78 487 422 17
    295 C N 69 497 387 15
    295 C CA 56 499 380 17
    295 C C 54 489 368 18
    295 C O 44 482 367 18
    295 C CB 54 513 377 14
    295 C SG 37 517 370 24
    296 G N 64 489 359 18
    296 G CA 63 481 347 14
    296 G C 63 467 351 16
    296 G O 55 459 345 16
    297 N N 71 462 361 16
    297 N CA 70 448 365 15
    297 N C 57 445 371 12
    297 N O 52 434 368 14
    297 N CB 81 445 376 18
    297 N CG 95 442 369 25
    297 N OD1 96 441 357 21
    297 N ND2 105 439 378 20
    298 T N 51 454 379 14
    298 T CA 37 451 385 16
    298 T C 27 450 374 15
    298 T O 19 441 373 17
    298 T CB 34 461 396 21
    298 T OG1 45 463 405 23
    298 T CG2 22 456 404 18
    299 L N 26 460 365 16
    299 L CA 17 460 354 18
    299 L C 18 448 345 20
    299 L O 7 441 342 19
    299 L CB 19 473 345 15
    299 L CG 14 486 351 15
    299 L CD1 17 497 341 19
    299 L CD2 0 485 353 17
    300 T N 30 444 342 19
    300 T CA 32 432 333 16
    300 T C 29 419 340 15
    300 T O 24 410 335 15
    300 T CB 47 433 327 21
    300 T OG1 48 443 318 25
    300 T CG2 50 420 320 21
    301 C N 33 418 353 16
    301 C CA 30 406 361 15
    301 C C 14 405 362 11
    301 C O 9 394 359 15
    301 C CB 36 407 375 15
    301 C SG 34 391 384 21
    302 Y N 8 416 365 12
    302 Y CA −6 416 366 18
    302 Y C −13 412 353 17
    302 Y O −23 405 352 17
    302 Y CB −11 429 371 18
    302 Y CG −26 431 372 20
    302 Y CD1 −33 427 384 23
    302 Y CD2 −33 437 362 23
    302 Y CE1 −46 429 385 25
    302 Y CE2 −47 439 363 24
    302 Y CZ −54 435 375 25
    302 Y OH −67 437 376 25
    303 L N −8 418 342 17
    303 L CA −14 416 328 17
    303 L C −13 401 325 18
    303 L O −23 395 323 18
    303 L CB −6 424 318 15
    303 L CG −9 422 303 18
    303 L CD1 −24 422 300 11
    303 L CD2 −2 433 295 13
    304 K N −1 395 325 17
    304 K CA 0 381 322 15
    304 K C −6 372 332 18
    304 K O −11 361 328 18
    304 K CB 15 378 322 15
    304 K CG 23 386 311 13
    304 K CD 38 381 310 11
    304 K CE 46 390 301 13
    304 K NZ 60 385 299 15
    305 A N −6 376 345 16
    305 A CA −12 367 355 18
    305 A C −27 367 354 15
    305 A O −34 356 354 18
    305 A CB −8 371 369 22
    306 S N −33 379 352 17
    306 S CA −48 380 350 19
    306 S C −53 372 338 20
    306 S O −62 364 339 15
    306 S CB −52 394 348 18
    306 S OG −49 403 359 22
    307 A N −46 373 327 18
    307 A CA −49 366 315 15
    307 A C −47 351 316 17
    307 A O −55 343 311 21
    307 A CB −40 371 303 13
    308 A N −37 346 324 16
    308 A CA −34 332 326 14
    308 A C −45 326 335 14
    308 A O −48 314 334 16
    308 A CB −21 330 332 15
    309 C N −51 334 344 19
    309 C CA −61 329 353 22
    309 C C −74 326 344 20
    309 C O −80 315 346 23
    309 C CB −65 340 363 21
    309 C SG −54 342 377 27
    310 R N −77 335 335 24
    310 R CA −88 332 326 22
    310 R C −85 320 317 23
    310 R O −93 311 316 24
    310 R CB −90 345 317 17
    310 R CG −93 357 325 16
    310 R CD −97 368 316 14
    310 R NE −99 380 324 18
    310 R CZ −105 391 320 19
    310 R NH1 −109 393 307 25
    310 R NH2 −106 402 328 22
    311 A N −72 319 312 25
    311 A CA −68 307 305 25
    311 A C −69 294 313 27
    311 A O −73 284 307 27
    311 A CB −54 309 300 24
    312 A N −66 294 325 26
    312 A CA −66 282 334 27
    312 A C −80 280 339 27
    312 A O −83 269 346 26
    312 A CB −56 284 345 29
    313 K N −89 289 337 29
    313 K CA −103 289 342 30
    313 K C −104 288 357 30
    313 K O −112 280 362 29
    313 K CB −111 277 335 33
    313 K CG −111 278 320 36
    313 K CD −116 264 314 39
    313 K CE −106 254 315 48
    313 K NZ −110 241 309 53
    314 L N −96 296 363 29
    314 L CA −96 297 378 29
    314 L C −109 304 383 29
    314 L O −113 314 376 33
    314 L CB −83 304 383 28
    314 L CG −71 296 387 29
    314 L CD1 −69 285 377 32
    314 L CD2 −58 304 388 26
    315 Q N −115 299 393 31
    315 Q CA −128 305 398 35
    315 Q C −126 317 408 33
    315 Q O −119 315 419 33
    315 Q CB −136 294 405 42
    315 Q CG −144 285 395 50
    315 Q CD −155 293 388 56
    315 Q OE1 −154 297 377 58
    315 Q NE2 −166 295 395 57
    316 D N −133 328 406 35
    316 D CA −133 340 415 37
    316 D C −119 342 420 37
    316 D O −116 340 432 37
    316 D CB −143 338 427 39
    316 D CG −145 351 435 46
    316 D OD1 −139 362 431 52
    316 D OD2 −152 351 445 50
    317 C N −110 347 411 35
    317 C CA −96 350 415 30
    317 C C −94 364 420 28
    317 C O −100 373 415 27
    317 C CB −87 348 403 28
    317 C SG −87 332 397 30
    318 T N −86 364 431 26
    318 T CA −82 377 436 26
    318 T C −67 376 437 25
    318 T O −61 366 442 26
    318 T CB −87 379 451 27
    318 T OG1 −101 376 451 30
    318 T CG2 −85 393 455 21
    319 M N −60 386 431 24
    319 M CA −45 386 431 26
    319 M C −39 397 439 22
    319 M O −46 407 442 20
    319 M CB −40 386 417 28
    319 M CG −45 374 409 36
    319 M SD −40 377 389 41
    319 M CE −31 395 390 34
    320 L N −27 395 443 23
    320 L CA −19 405 450 21
    320 L C −6 406 443 18
    320 L O 0 395 442 18
    320 L CB −18 401 465 20
    320 L CG −12 412 474 19
    320 L CD1 −20 425 472 18
    320 L CD2 −11 407 488 23
    321 V N −2 417 437 20
    321 V CA 9 418 430 19
    321 V C 18 429 435 16
    321 V O 14 441 438 16
    321 V CB 6 421 414 18
    321 V CG1 18 419 406 17
    321 V CG2 −5 412 410 18
    322 N N 31 426 436 17
    322 N CA 42 436 441 19
    322 N C 53 433 431 19
    322 N O 61 425 433 19
    322 N CB 47 432 455 21
    322 N CG 37 435 465 22
    322 N OD1 27 427 467 26
    322 N ND2 39 446 473 23
    323 G N 53 441 420 20
    323 G CA 64 439 410 19
    323 G C 62 425 404 20
    323 G O 52 421 400 20
    324 D N 73 417 405 21
    324 D CA 74 404 400 19
    324 D C 68 393 409 22
    324 D O 69 381 407 23
    324 D CB 88 400 396 25
    324 D CG 97 398 409 29
    324 D OD1 98 407 417 28
    324 D OD2 103 387 410 36
    325 D N 64 398 421 22
    325 D CA 59 388 431 23
    325 D C 43 388 430 19
    325 D O 36 398 430 15
    325 D CB 63 393 445 27
    325 D CG 64 381 455 35
    325 D OD1 54 375 458 39
    325 D OD2 76 378 458 38
    326 L N 39 375 429 17
    326 L CA 24 373 427 21
    326 L C 18 363 436 18
    326 L O 24 352 439 19
    326 L CB 22 367 412 22
    326 L CG 8 362 409 23
    326 L CD1 −1 374 409 22
    326 L CD2 8 356 395 24
    327 V N 6 365 441 21
    327 V CA −1 356 449 22
    327 V C −15 357 444 21
    327 V O −21 367 441 18
    327 V CB 0 360 464 20
    327 V CG1 −12 365 470 27
    327 V CG2 5 348 472 21
    328 V N −21 345 443 23
    328 V CA −35 343 438 25
    328 V C −43 335 448 24
    328 V O −39 324 452 27
    328 V CB −35 335 424 24
    328 V CG1 −50 334 420 23
    328 V CG2 −28 343 413 26
    329 I N −55 341 451 27
    329 I CA −65 334 460 26
    329 I C −77 333 452 28
    329 I O −82 342 445 26
    329 I CB −67 342 473 27
    329 I CG1 −54 343 482 25
    329 I CG2 −79 336 481 21
    329 I CD1 −55 352 493 24
    330 C N −83 321 452 30
    330 C CA −95 318 444 32
    330 C C −104 308 451 34
    330 C O −101 303 462 33
    330 C CB −90 312 430 29
    330 C SG −81 296 432 31
    331 E N −114 304 444 34
    331 E CA −124 294 449 33
    331 E C −120 281 445 32
    331 E O −117 278 433 36
    331 E CB −138 298 443 31
    331 E CG −150 292 449 33
    331 E CD −152 297 463 31
    331 E OE1 −156 309 465 28
    331 E OE2 −151 289 472 31
    332 S N −118 272 454 32
    332 S CA −113 258 452 33
    332 S C −123 249 444 38
    332 S O −136 251 446 40
    332 S CB −109 251 464 33
    332 S OG −105 238 462 30
    333 A N −119 240 436 38
    333 A CA −127 231 429 39
    333 A C −122 216 431 40
    333 A O −124 208 423 46
    333 A CB −126 234 414 35
    334 G N −116 214 443 37
    334 G CA −111 201 446 36
    334 G C −96 200 444 37
    334 G O −91 206 434 39
    335 V N −89 193 453 37
    335 V CA −75 191 452 41
    335 V C −69 187 438 42
    335 V O −60 193 433 42
    335 V CB −69 182 464 41
    335 V CG1 −77 169 464 44
    335 V CG2 −54 180 462 44
    336 Q N −76 177 432 45
    336 Q CA −71 171 419 45
    336 Q C −74 181 408 44
    336 Q O −66 182 398 41
    336 Q CB −78 158 416 49
    336 Q CG −74 147 426 53
    336 Q CD −58 146 428 59
    336 Q OE1 −51 147 418 63
    336 Q NE2 −54 143 440 63
    337 E N −85 188 409 40
    337 E CA −88 198 399 39
    337 E C −79 210 401 41
    337 E O −74 216 391 40
    337 E CB −103 202 400 38
    337 E CG −108 211 388 43
    337 E CD −105 206 374 46
    337 E OE1 −106 194 371 41
    337 E OE2 −101 214 365 49
    338 D N −76 214 413 40
    338 D CA −67 225 417 34
    338 D C −53 223 411 31
    338 D O −47 233 407 31
    338 D CB −67 228 432 30
    338 D CG −80 234 437 31
    338 D OD1 −89 238 429 34
    338 D OD2 −82 236 449 31
    339 A N −48 211 411 29
    339 A CA −35 208 406 30
    339 A C −35 209 391 33
    339 A O −26 214 384 35
    339 A CB −31 194 410 30
    340 A N −47 206 385 32
    340 A CA −48 207 370 31
    340 A C −49 221 366 29
    340 A O −42 225 356 27
    340 A CB −61 199 366 28
    341 S N −56 230 373 28
    341 S CA −58 244 370 29
    341 S C −44 251 371 30
    341 S O −42 261 363 29
    341 S CB −68 250 379 28
    341 S OG −80 244 377 34
    342 L N −36 247 380 31
    342 L CA −22 253 382 29
    342 L C −13 250 371 27
    342 L O −5 259 367 28
    342 L CB −16 249 395 28
    342 L CG −17 259 407 25
    342 L CD1 −7 255 418 22
    342 L CD2 −14 272 402 28
    343 R N −14 238 366 26
    343 R CA −5 234 354 29
    343 R C −10 242 342 27
    343 R O −1 246 334 26
    343 R CB −7 219 351 31
    343 R CG 5 210 355 41
    343 R CD 2 195 353 47
    343 R NE −5 193 341 58
    343 R CZ −16 187 340 64
    343 R NH1 −22 182 351 67
    343 R NH2 −23 186 328 66
    344 A N −23 245 341 27
    344 A CA −28 253 330 24
    344 A C −24 267 331 24
    344 A O −20 274 321 24
    344 A CB −43 252 329 23
    345 F N −24 272 344 24
    345 F CA −20 286 346 22
    345 F C −5 288 343 20
    345 F O −1 297 336 23
    345 F CB −22 289 361 16
    345 F CG −17 303 365 17
    345 F CD1 −4 305 370 17
    345 F CD2 −26 314 365 16
    345 F CE1 0 318 373 19
    345 F CE2 −22 327 368 15
    345 F CZ −9 329 373 17
    346 T N 3 278 347 20
    346 T CA 17 279 345 23
    346 T C 20 278 330 23
    346 T O 28 286 325 24
    346 T CB 24 267 352 22
    346 T OG1 21 268 366 24
    346 T CG2 39 268 349 21
    347 E N 13 270 323 23
    347 E CA 14 268 308 21
    347 E C 11 281 301 20
    347 E O 17 285 292 22
    347 E CB 5 257 303 21
    347 E CG 11 243 307 26
    347 E CD 1 232 305 35
    347 E OE1 −10 234 301 38
    347 E OE2 5 220 308 40
    348 A N 1 288 307 17
    348 A CA −2 301 301 17
    348 A C 7 311 303 18
    348 A O 11 318 294 21
    348 A CB −16 305 306 17
    349 M N 12 311 316 21
    349 M CA 23 321 319 17
    349 M C 35 318 311 16
    349 M O 42 328 307 16
    349 M CB 27 319 334 20
    349 M CG 17 324 344 12
    349 M SD 14 344 343 22
    349 M CE 31 352 352 21
    350 T N 38 306 308 14
    350 T CA 50 302 300 21
    350 T C 48 308 285 24
    350 T O 58 314 280 21
    350 T CB 52 287 299 21
    350 T OG1 53 282 313 25
    350 T CG2 64 284 291 22
    351 R N 36 307 279 22
    351 R CA 34 312 266 20
    351 R C 36 327 265 18
    351 R O 39 332 255 20
    351 R CB 20 309 261 19
    351 R CG 17 295 257 19
    351 R CD 3 294 252 22
    351 R NE −2 282 258 34
    351 R CZ −12 281 267 30
    351 R NH1 −17 292 272 30
    351 R NH2 −15 269 272 33
    352 Y N 33 333 276 19
    352 Y CA 34 348 277 16
    352 Y C 48 352 281 16
    352 Y O 51 363 284 20
    352 Y CB 25 353 288 18
    352 Y CG 10 351 286 22
    352 Y CD1 5 351 273 21
    352 Y CD2 1 349 297 21
    352 Y CE1 −8 349 271 22
    352 Y CE2 −11 347 295 23
    352 Y CZ −17 348 282 23
    352 Y OH −30 347 281 24
    353 S N 57 342 281 21
    353 S CA 71 344 284 26
    353 S C 75 345 299 28
    353 S O 85 351 302 35
    353 S CB 78 354 276 21
    353 S OG 79 367 282 28
    354 A N 66 340 308 26
    354 A CA 69 341 322 26
    354 A C 70 327 328 27
    354 A O 62 323 337 26
    354 A CB 59 349 329 23
    355 P N 80 319 324 28
    355 P CA 81 305 330 27
    355 P C 84 306 344 29
    355 P O 89 316 350 27
    355 P CB 93 300 321 23
    355 P CG 101 312 320 26
    355 P CD 92 322 316 29
    356 P N 81 295 352 32
    356 P CA 83 294 366 32
    356 P C 97 289 370 33
    356 P O 104 283 363 35
    356 P CB 73 284 370 34
    356 P CG 73 274 359 31
    356 P CD 73 284 347 34
    357 G N 101 294 382 33
    357 G CA 114 289 388 36
    357 G C 110 277 395 40
    357 G O 114 266 392 41
    358 D N 102 279 406 43
    358 D CA 97 268 414 45
    358 D C 83 265 409 42
    358 D O 75 274 407 41
    358 D CB 97 271 429 49
    358 D CG 110 274 435 52
    358 D OD1 119 264 434 56
    358 D OD2 113 285 440 55
    359 P N 80 252 408 41
    359 P CA 66 248 403 41
    359 P C 56 253 413 38
    359 P O 57 251 425 40
    359 P CB 66 233 403 43
    359 P CG 81 230 400 42
    359 P CD 88 240 409 41
    360 P N 46 261 409 36
    360 P CA 35 266 418 33
    360 P C 29 254 426 34
    360 P O 29 243 421 35
    360 P CB 25 272 409 35
    360 P CG 33 276 396 35
    360 P CD 42 264 395 33
    361 Q N 24 257 438 37
    361 Q CA 18 247 446 36
    361 Q C 5 252 452 30
    361 Q O 5 262 459 27
    361 Q CB 28 242 457 43
    361 Q CG 25 230 464 57
    361 Q CD 35 226 474 64
    361 Q OE1 33 227 486 67
    361 Q NE2 47 222 469 67
    362 P N −5 244 451 29
    362 P CA −18 248 457 27
    362 P C −17 247 472 25
    362 P O −13 237 478 26
    362 P CB −28 238 451 26
    362 P CG −21 231 440 25
    362 P CD −7 231 444 28
    363 E N −22 258 479 25
    363 E CA −21 258 493 27
    363 E C −35 260 499 28
    363 E O −43 268 494 25
    363 E CB −11 269 499 28
    363 E CG 2 266 496 29
    363 E CD 8 254 505 33
    363 E OE1 1 249 514 33
    363 E OE2 20 250 503 33
    364 Y N −38 253 510 31
    364 Y CA −51 254 516 34
    364 Y C −51 260 530 34
    364 Y O −61 260 538 34
    364 Y CB −59 240 516 35
    364 Y CG −60 235 502 37
    364 Y CD1 −71 238 494 36
    364 Y CD2 −50 226 497 35
    364 Y CE1 −72 234 481 34
    364 Y CE2 −51 222 483 34
    364 Y CZ −62 226 476 34
    364 Y OH −62 222 462 38
    365 D N −39 264 534 35
    365 D CA −36 271 547 35
    365 D C −30 284 544 33
    365 D O −19 284 538 34
    365 D CB −27 262 555 40
    365 D CG −25 267 570 48
    365 D OD1 −28 279 573 50
    365 D OD2 −19 259 578 53
    366 L N −37 295 547 32
    366 L CA −32 308 544 34
    366 L C −18 311 549 34
    366 L O −9 316 542 34
    366 L CB −41 319 549 32
    366 L CG −37 333 547 34
    366 L CD1 −34 336 532 35
    366 L CD2 −48 343 552 33
    367 E N −15 307 562 34
    367 E CA −2 308 568 35
    367 E C 8 301 561 34
    367 E O 20 304 563 30
    367 E CB −3 303 583 40
    367 E CG −13 310 592 45
    367 E CD −13 305 606 49
    367 E OE1 −2 302 611 51
    367 E OE2 −23 304 612 52
    368 L N 5 292 552 34
    368 L CA 15 284 545 33
    368 L C 19 290 531 32
    368 L O 26 284 524 32
    368 L CB 10 270 543 36
    368 L CG 9 263 556 36
    368 L CD1 5 248 554 37
    368 L CD2 22 263 563 37
    369 I N 13 302 528 31
    369 I CA 16 308 516 28
    369 I C 27 319 518 29
    369 I O 25 329 526 29
    369 I CB 4 314 509 26
    369 I CG1 −5 303 505 22
    369 I CG2 8 323 497 21
    369 I CD1 −18 308 499 21
    370 T N 38 318 511 27
    370 T CA 49 328 511 28
    370 T C 48 337 499 27
    370 T O 50 332 488 30
    370 T CB 63 322 512 29
    370 T OG1 64 314 525 27
    370 T CG2 74 332 512 24
    371 S N 45 350 501 31
    371 S CA 45 360 490 32
    371 S C 52 372 496 34
    371 S O 50 376 507 30
    371 S CB 30 364 487 34
    371 S OG 23 369 499 33
    372 C N 62 377 488 34
    372 C CA 70 388 491 35
    372 C C 80 384 503 33
    372 C O 84 392 511 31
    372 C CB 62 400 496 35
    372 C SG 55 410 482 34
    373 S N 84 371 502 33
    373 S CA 93 365 512 35
    373 S C 86 364 527 35
    373 S O 93 361 536 35
    373 S CB 106 372 513 34
    373 S OG 114 370 501 33
    374 S N 73 367 527 30
    374 S CA 66 368 540 27
    374 S C 55 358 540 27
    374 S O 53 350 530 26
    374 S CB 61 382 541 28
    374 S OG 71 392 539 36
    375 N N 47 358 551 26
    375 N CA 36 349 553 24
    375 N C 28 355 565 26
    375 N O 33 363 573 25
    375 N CB 40 334 556 25
    375 N CG 46 332 569 28
    375 N OD1 59 333 571 24
    375 N ND2 39 328 579 27
    376 V N 15 351 566 26
    376 V CA 6 355 576 24
    376 V C 8 345 588 23
    376 V O 10 334 585 22
    376 V CB −8 356 571 27
    376 V CG1 −18 356 583 22
    376 V CG2 −11 368 562 23
    377 S N 7 351 600 23
    377 S CA 8 342 612 21
    377 S C 0 348 623 21
    377 S O −5 359 621 21
    377 S CB 23 341 617 15
    377 S OG 25 328 624 17
    378 V N −2 341 634 25
    378 V CA −11 345 645 27
    378 V C −4 346 659 24
    378 V O 4 338 662 23
    378 V CB −23 335 646 25
    378 V CG1 −35 341 654 26
    378 V CG2 −27 330 633 28
    379 A N −8 356 666 25
    379 A CA −3 359 680 26
    379 A C −16 363 687 29
    379 A O −27 361 682 29
    379 A CB 6 370 680 22
    380 H N −14 369 699 29
    380 H CA −26 373 707 27
    380 H C −22 386 714 28
    380 H O −11 387 720 31
    380 H CB −29 363 718 28
    380 H CG −33 350 712 30
    380 H ND1 −46 345 711 30
    380 H CD2 −25 339 708 30
    380 H CE1 −46 333 706 31
    380 H NE2 −33 329 704 34
    381 D N −30 396 713 27
    381 D CA −27 409 720 29
    381 D C −29 409 735 31
    381 D O −32 398 740 32
    381 D CB −36 420 714 32
    381 D CG −51 419 717 37
    381 D CD1 −55 409 722 31
    381 D OD2 −58 429 714 43
    382 A N −28 420 742 34
    382 A CA −30 421 756 37
    382 A C −43 413 760 38
    382 A O −42 404 768 40
    382 A CB −31 435 760 35
    383 S N −54 417 754 38
    383 S CA −67 411 757 39
    383 S C −69 396 753 39
    383 S O −80 391 755 44
    383 S CB −78 419 750 36
    383 S OG −77 432 753 40
    384 G N −59 389 748 37
    384 G CA −61 375 745 32
    384 G C −66 373 731 32
    384 G O −66 361 726 34
    385 K N −71 383 724 33
    385 K CA −77 382 711 35
    385 K C −67 377 701 36
    385 K O −55 381 701 36
    385 K CB −83 395 706 34
    385 K CG −88 395 692 38
    385 K CD −95 409 687 37
    385 K CE −85 421 689 38
    385 K NZ −92 433 685 36
    386 R N −71 369 692 37
    386 R CA −62 364 681 39
    386 R C −60 375 671 39
    386 R O −69 381 666 40
    386 R CB −68 352 674 38
    386 R CG −67 339 682 43
    386 R CD −75 327 676 45
    386 R NE −73 326 661 47
    386 R CZ −64 318 655 46
    386 R NH1 −56 310 663 44
    386 R NH2 −63 318 642 46
    387 V N −47 377 668 38
    387 V CA −43 388 658 37
    387 V C −34 383 647 35
    387 V O −25 375 650 36
    387 V CB −38 401 666 36
    387 V CG1 −28 397 676 37
    387 V CG2 −32 411 656 38
    388 Y N −36 386 635 34
    388 Y CA −28 382 624 30
    388 Y C −18 393 621 29
    388 Y O −21 405 622 31
    388 Y CB −36 380 611 29
    388 Y CG −47 369 612 23
    388 Y CD1 −44 356 611 23
    388 Y CD2 −60 372 617 26
    388 Y CE1 −53 346 613 32
    388 Y CE2 −69 362 619 30
    388 Y CZ −66 349 617 32
    388 Y OH −75 339 620 39
    389 Y N −6 389 617 28
    389 Y CA 4 398 615 23
    389 Y C 14 392 604 20
    389 Y O 14 380 601 18
    389 Y CB 12 401 628 20
    389 Y CG 20 390 633 19
    389 Y CD1 14 379 640 18
    389 Y CD2 34 389 631 20
    389 Y CE1 21 368 644 15
    389 Y CE2 41 378 635 14
    389 Y CZ 34 367 641 14
    389 Y OH 41 356 644 18
    390 L N 22 400 598 22
    390 L CA 32 396 588 20
    390 L C 46 392 594 21
    390 L O 52 400 601 19
    390 L CB 33 407 578 21
    390 L CG 39 404 564 21
    390 L CD1 29 394 557 20
    390 L CD2 40 416 556 23
    391 T N 51 381 589 18
    391 T CA 64 376 594 19
    391 T C 71 370 582 21
    391 T O 66 371 571 23
    391 T CB 62 366 606 18
    391 T OG1 76 363 610 20
    391 T CG2 55 353 601 15
    392 R N 83 365 584 20
    392 R CA 91 358 574 20
    392 R C 102 350 581 22
    392 R O 105 352 593 24
    392 R CB 98 369 565 21
    392 R CG 107 379 573 18
    392 R CD 117 385 563 18
    392 R NE 126 375 557 19
    392 R CZ 131 377 545 16
    392 R NH1 130 388 539 20
    392 R NH2 138 367 540 13
    393 D N 109 342 574 20
    393 D CA 120 334 579 24
    393 D C 131 345 582 25
    393 D O 134 353 574 26
    393 D CB 125 325 568 25
    393 D CG 136 315 573 25
    393 D OD1 147 320 574 28
    393 D OD2 134 303 574 27
    394 P N 137 344 594 25
    394 P CA 147 355 597 24
    394 P C 162 353 593 21
    394 P O 170 360 597 19
    394 P CB 145 356 613 21
    394 P CG 143 342 617 22
    394 P CD 135 335 606 21
    395 T N 164 342 585 22
    395 T CA 178 339 581 20
    395 T C 185 351 574 21
    395 T O 196 354 578 22
    395 T CB 179 327 572 20
    395 T OG1 173 315 580 24
    395 T CG2 193 323 568 19
    396 T N 179 356 563 18
    396 T CA 185 367 556 20
    396 T C 186 380 565 19
    396 T O 196 386 565 17
    396 T CB 179 369 542 20
    396 T OG1 180 358 534 20
    396 T CG2 186 381 535 16
    397 P N 175 383 572 18
    397 P CA 176 395 581 17
    397 P C 187 394 591 16
    397 P O 194 404 594 18
    397 P CB 162 395 587 19
    397 P CG 153 391 576 14
    397 P CD 161 379 571 17
    398 L N 189 382 597 18
    398 L CA 199 380 607 20
    398 L C 213 380 601 20
    398 L O 223 385 607 20
    398 L CB 196 367 615 20
    398 L CG 184 368 625 19
    398 L CD1 182 354 631 19
    398 L CD2 186 378 635 20
    399 A N 215 373 589 19
    399 A CA 228 373 583 16
    399 A C 233 387 580 15
    399 A O 244 390 581 14
    399 A CB 227 365 570 16
    400 R N 223 396 575 15
    400 R CA 227 410 572 15
    400 R C 229 418 585 16
    400 R O 237 428 584 14
    400 R CB 215 417 564 14
    400 R CG 212 408 552 17
    400 R CD 203 415 541 19
    400 R NE 205 407 529 22
    400 R CZ 199 410 517 22
    400 R NH1 190 420 516 26
    400 R NH2 201 402 507 21
    401 A N 222 415 596 19
    401 A CA 224 422 608 19
    401 A C 239 419 613 18
    401 A O 246 428 618 19
    401 A CB 215 417 619 17
    402 A N 243 406 611 18
    402 A CA 257 403 615 18
    402 A C 267 411 607 20
    402 A O 276 417 613 20
    402 A CB 260 388 612 15
    403 W N 264 413 594 15
    403 W CA 273 421 586 19
    403 W C 274 435 590 19
    403 W O 284 441 591 17
    403 W CB 269 420 571 19
    403 W CG 280 425 561 20
    403 W CD1 283 438 559 19
    403 W CD2 289 417 553 19
    403 W NE1 294 439 550 19
    403 W CE2 297 426 546 19
    403 W CE3 290 403 551 19
    403 W CZ2 307 421 537 21
    403 W CZ3 300 398 543 23
    403 W CH2 308 407 536 17
    404 E N 262 441 593 20
    404 E CA 260 455 597 18
    404 E C 265 458 611 17
    404 E O 268 469 615 20
    404 E CB 246 460 595 19
    404 E CG 242 461 581 18
    404 E CD 227 460 578 26
    404 E OE1 219 459 587 25
    404 E OE2 223 461 566 23
    405 T N 267 447 619 19
    405 T CA 273 448 633 22
    405 T C 287 453 632 23
    405 T O 291 462 639 27
    405 T CB 272 435 640 21
    405 T OG1 258 432 643 20
    405 T CG2 279 435 654 17
    406 A N 295 448 622 22
    406 A CA 309 451 621 23
    406 A C 313 461 609 25
    406 A O 324 465 608 25
    406 A CB 317 438 619 22
    407 R N 303 464 601 26
    407 R CA 306 473 589 25
    407 R C 294 483 587 25
    407 R O 283 479 588 30
    407 R CB 306 465 576 26
    407 R CG 319 458 573 27
    407 R CD 329 469 568 32
    407 R NE 342 463 565 34
    407 R CZ 351 458 573 38
    407 R NH1 349 459 586 36
    407 R NH2 361 451 568 36
    408 H N 298 495 584 29
    408 H CA 287 505 582 34
    408 H C 283 503 567 34
    408 H O 292 502 559 37
    408 H CB 293 519 585 38
    408 H CG 295 522 599 46
    408 H ND1 307 527 604 49
    408 H CD2 287 520 610 48
    408 H CE1 306 528 617 51
    408 H NE2 294 524 621 50
    409 T N 270 502 565 33
    409 T CA 265 501 551 29
    409 T C 257 513 547 26
    409 T O 253 521 555 24
    409 T CB 257 487 550 25
    409 T OG1 247 487 560 27
    409 T CG2 267 475 550 24
    410 P N 255 514 533 29
    410 P CA 247 525 528 27
    410 P C 232 523 531 25
    410 P O 224 533 532 27
    410 P CB 250 525 513 28
    410 P CG 262 517 512 30
    410 P CD 261 506 522 32
    411 V N 228 511 533 26
    411 V CA 214 508 536 29
    411 V C 214 498 548 27
    411 V O 220 487 548 30
    411 V CB 207 501 525 31
    411 V CG1 192 498 529 28
    411 V CG2 207 510 512 31
    412 N N 208 503 559 26
    412 N CA 207 495 572 21
    412 N C 195 487 572 18
    412 N O 184 491 575 22
    412 N CB 206 505 584 18
    412 N CG 219 513 585 18
    412 N OD1 228 509 591 24
    412 N ND2 219 525 578 21
    413 S N 197 474 568 18
    413 S CA 186 465 567 22
    413 S C 179 462 581 23
    413 S O 167 459 581 22
    413 S CB 189 451 560 20
    413 S OG 198 443 568 23
    414 W N 187 462 592 21
    414 W CA 182 459 605 18
    414 W C 171 470 609 18
    414 W O 161 466 615 20
    414 W CB 193 459 615 16
    414 W CG 200 473 618 16
    414 W CD1 212 477 612 15
    414 W CD2 196 483 627 18
    414 W NE1 215 490 617 17
    414 W CE2 205 494 626 19
    414 W CE3 185 485 635 20
    414 W CZ2 204 506 633 17
    414 W CZ3 183 497 642 19
    414 W CH2 193 507 641 21
    415 L N 173 482 605 15
    415 L CA 163 492 608 18
    415 L C 151 491 599 21
    415 L O 140 493 604 22
    415 L CB 169 506 606 16
    415 L CG 161 519 608 18
    415 L CD1 154 519 621 18
    415 L CD2 170 531 607 16
    416 G N 153 487 586 21
    416 G CA 141 485 577 16
    416 G C 133 473 583 18
    416 G O 121 473 583 18
    417 N N 140 463 587 16
    417 N CA 134 451 592 19
    417 N C 127 453 606 21
    417 N O 116 447 608 21
    417 N CB 144 440 594 17
    417 N CG 146 432 580 23
    417 N OD1 137 432 572 23
    417 N ND2 158 427 578 20
    418 I N 132 462 614 18
    418 I CA 125 464 627 21
    418 I C 112 472 623 23
    418 I O 101 468 628 23
    418 I CB 133 473 636 23
    418 I CG1 144 465 643 20
    418 I CG2 125 480 647 22
    418 I CD1 154 474 652 19
    419 I N 112 481 614 20
    419 I CA 100 489 610 23
    419 I C 90 480 604 23
    419 I O 78 480 608 23
    419 I CB 104 501 600 20
    419 I CG1 112 511 608 17
    419 I CG2 91 507 595 18
    419 I CD1 118 522 599 19
    420 M N 94 472 594 21
    420 M CA 84 464 587 21
    420 M C 79 452 595 21
    420 M O 68 448 593 18
    420 M CB 91 459 574 22
    420 M CG 94 471 564 25
    420 M SD 77 481 559 35
    420 M CE 70 467 545 28
    421 Y N 88 446 603 21
    421 Y CA 84 434 610 17
    421 Y C 84 436 626 17
    421 Y O 86 427 633 19
    421 Y CB 94 422 607 16
    421 Y CG 93 418 592 19
    421 Y CD1 83 410 588 17
    421 Y CD2 102 422 583 20
    421 Y CE1 82 406 575 24
    421 Y CE2 102 419 570 20
    421 Y CZ 91 410 566 26
    421 Y OH 90 407 552 24
    422 A N 81 448 630 17
    422 A CA 80 451 644 20
    422 A C 72 441 653 24
    422 A O 76 438 664 29
    422 A CB 75 465 646 14
    423 P N 61 436 648 25
    423 P CA 53 426 656 23
    423 P C 59 412 657 22
    423 P O 54 404 666 22
    423 P CB 39 426 648 24
    423 P CG 38 439 642 23
    423 P CD 52 441 636 21
    424 T N 69 409 649 20
    424 T CA 75 396 650 20
    424 T C 83 392 662 21
    424 T O 89 401 668 23
    424 T CB 83 392 637 22
    424 T OG1 95 401 637 22
    424 T CG2 75 394 624 16
    425 L N 83 380 665 21
    425 L CA 91 374 677 22
    425 L C 106 377 675 22
    425 L O 112 384 684 18
    425 L CB 88 359 677 22
    425 L CG 93 349 687 30
    425 L CD1 87 352 701 31
    425 L CD2 88 335 683 28
    426 W N 111 375 663 22
    426 W CA 125 377 660 19
    426 W C 130 391 659 20
    426 W O 141 395 664 20
    426 W CB 129 368 647 22
    426 W CG 120 372 635 25
    426 W CD1 108 366 631 25
    426 W CD2 123 382 625 23
    426 W NE1 103 372 620 20
    426 W CE2 112 382 616 24
    426 W CE3 133 392 624 19
    426 W CZ2 111 391 605 21
    426 W CZ3 133 400 613 19
    426 W CH2 122 400 604 24
    427 A N 122 400 654 16
    427 A CA 126 414 653 16
    427 A C 125 421 667 18
    427 A O 133 430 669 18
    427 A CB 117 422 643 19
    428 R N 116 417 675 19
    428 R CA 115 422 689 19
    428 R C 126 418 698 15
    428 R O 133 426 704 17
    428 R CB 101 419 694 13
    428 R CG 90 427 688 17
    428 R CD 76 422 692 21
    428 R NE 71 428 704 24
    428 R CZ 63 423 713 26
    428 R NH1 58 411 710 20
    428 R NH2 59 429 724 20
    429 M N 128 405 699 18
    429 M CA 138 399 708 20
    429 M C 152 400 704 20
    429 M O 161 401 712 23
    429 M CB 134 385 711 17
    429 M CG 120 383 717 23
    429 M SD 115 365 723 29
    429 M CE 99 369 734 39
    430 I N 155 398 691 19
    430 I CA 169 399 686 18
    430 I C 173 412 680 18
    430 I O 182 419 685 16
    430 I CB 172 387 677 18
    430 I CG1 168 374 684 17
    430 I CG2 187 387 673 15
    430 I CD1 169 362 675 20
    431 L N 167 416 669 18
    431 L CA 170 429 663 16
    431 L C 170 441 672 18
    431 L O 181 448 673 16
    431 L CB 162 431 650 16
    431 L CG 164 422 638 17
    431 L CD1 156 427 626 12
    431 L CD2 179 420 635 16
    432 M N 159 444 678 16
    432 M CA 158 455 687 17
    432 M C 168 455 699 14
    432 M O 174 465 702 17
    432 M CB 144 457 692 19
    432 M CG 133 459 682 24
    432 M SD 115 462 690 25
    432 M CE 116 451 707 40
    433 T N 168 443 705 16
    433 T CA 178 442 717 16
    433 T C 192 444 712 17
    433 T O 199 453 718 19
    433 T CB 176 428 722 19
    433 T OG1 162 425 725 22
    433 T CG2 184 426 735 17
    434 H N 197 437 702 16
    434 H CA 210 438 698 18
    434 H C 214 453 694 17
    434 H O 223 459 699 18
    434 H CB 213 429 686 20
    434 H CG 227 429 680 24
    434 H ND1 237 423 687 24
    434 H CD2 232 433 669 20
    434 H CE1 248 424 680 26
    434 H NE2 245 430 668 22
    435 F N 207 458 684 19
    435 F CA 211 471 679 14
    435 F C 208 483 689 17
    435 F O 216 492 688 14
    435 F CB 204 474 665 16
    435 F CG 210 466 654 16
    435 F CD1 223 469 649 14
    435 F CD2 204 454 649 15
    435 F CE1 229 461 640 16
    435 F CE2 210 446 640 15
    435 F CZ 223 449 635 12
    436 F N 198 482 697 19
    436 F CA 196 493 707 18
    436 F C 208 492 717 16
    436 F O 212 502 722 17
    436 F CB 182 493 713 16
    436 F CG 173 502 706 15
    436 F CD1 165 497 696 16
    436 F CD2 171 515 710 15
    436 F CE1 156 506 689 11
    436 F CE2 163 524 704 16
    436 F CZ 155 519 693 10
    437 S N 214 480 719 18
    437 S CA 225 478 728 21
    437 S C 237 486 722 20
    437 S O 243 495 729 20
    437 S CB 229 464 729 17
    437 S OG 239 461 739 22
    438 I N 240 484 709 23
    438 I CA 251 491 702 23
    438 I C 249 506 701 23
    438 I O 258 514 703 27
    438 I CB 253 486 688 22
    438 I CG1 257 471 687 19
    438 I CG2 264 494 681 29
    438 I CD1 255 465 674 17
    439 L N 237 510 698 23
    439 L CA 234 525 697 24
    439 L C 236 532 710 24
    439 L O 240 544 710 23
    439 L CB 220 527 692 28
    439 L CG 215 522 679 31
    439 L CD1 200 524 677 27
    439 L CD2 223 529 667 25
    440 L N 233 526 722 23
    440 L CA 234 531 735 23
    440 L C 249 534 738 21
    440 L O 252 545 742 21
    440 L CB 229 521 745 23
    440 L CG 214 522 750 20
    440 L CD1 210 510 756 23
    440 L CD2 213 534 758 21
    441 A N 257 524 736 23
    441 A CA 271 524 739 25
    441 A C 279 535 731 27
    441 A O 288 541 737 31
    441 A CB 278 510 735 23
    442 Q N 274 538 719 26
    442 Q CA 280 549 711 27
    442 Q C 273 562 712 30
    442 Q O 277 572 705 30
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    453 I O 101 517 505 19
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    459 S C 157 587 579 23
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    461 E C 158 572 645 25
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    465 L C 95 536 670 24
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    468 I N 68 554 650 27
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    468 I C 59 535 638 26
    468 I O 50 532 630 29
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    469 I C 42 515 653 23
    469 I O 34 508 648 22
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    470 E C 16 530 654 26
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    470 E OE2 −5 555 691 31
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    473 H C 2 486 646 25
    473 H O −4 477 650 24
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    475 L C 0 481 703 25
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    481 H O 8 359 714 27
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    482 S C 16 333 709 33
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    488 I C 95 287 667 26
    488 I O 108 289 668 25
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    499 G O 254 320 670 22
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    530 Y C 80 494 738 21
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    531 L C 102 472 734 20
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    532 F C 99 459 767 26
    532 F O 103 452 776 22
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    532 F CG 133 466 749 20
    532 F CD1 139 455 743 18
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    532 F CZ 151 469 728 8
    533 N N 87 462 765 28
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    533 N C 75 444 777 28
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    533 N CG 55 469 786 38
    533 N OD1 46 462 789 40
    533 N ND2 59 480 792 40
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    534 W C 87 415 774 27
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    534 W NE1 109 432 734 20
    534 W CE2 115 421 739 21
    534 W CE3 108 402 752 19
    534 W CZ2 128 417 738 19
    534 W CZ3 122 397 751 20
    534 W CH2 131 405 744 17
    535 A N 98 422 777 28
    535 A CA 108 417 785 30
    535 A C 106 415 800 32
    535 A O 111 406 806 32
    535 A CB 122 424 782 29
    536 V N 99 425 806 35
    536 V CA 96 425 820 39
    536 V C 83 416 824 44
    536 V O 75 414 815 43
    536 V CB 94 439 826 40
    536 V CG1 107 446 828 40
    536 V CG2 85 447 817 33
    537 K N 83 411 836 49
    537 K CA 71 403 840 51
    537 K C 59 411 843 53
    537 K O 48 409 839 54
    537 K CB 75 393 851 53
    537 K CG 81 399 864 59
    537 K CD 87 389 873 61
    537 K CE 98 394 882 62
    537 K NZ 106 384 888 61
    538 T N 61 422 851 55
    538 T CA 50 431 854 55
    538 T C 51 442 844 54
    538 T O 60 451 844 52
    538 T CB 52 437 869 55
    538 T OG1 53 427 878 51
    538 T CG2 40 446 872 53
    539 K N 43 441 834 53
    539 K CA 42 450 822 53
    539 K C 36 464 825 53
    539 K O 27 465 834 54
    539 K CB 33 443 811 53
    539 K CG 34 428 810 51
    539 K CD 46 424 801 50
    539 K CE 47 409 799 52
    539 K NZ 57 404 790 52
    540 L N 41 474 818 50
    540 L CA 36 487 820 49
    540 L C 24 491 812 49
    540 L O 19 483 804 49
    540 L CB 47 498 817 46
    540 L CG 59 501 827 47
    540 L CD1 62 516 825 45
    540 L CD2 55 498 841 48
    541 K N 20 504 814 51
    541 K CA 8 510 808 49
    541 K C 6 509 793 48
    541 K O −1 500 788 47
    541 K CB 8 525 811 50
    541 K CG 17 529 823 51
    541 K CD 18 544 825 53
    541 K CE 21 549 840 54
    541 K NZ 9 548 849 48
    542 L N 14 516 785 48
    542 L CA 15 517 771 45
    542 L C 2 523 765 43
    542 L O −7 516 761 43
    542 L CB 18 503 765 40
    542 L CG 33 501 763 34
    542 L CD1 41 506 775 31
    542 L CD2 35 486 761 32
    543 T N 2 536 765 42
    543 T CA −8 544 760 43
    543 T C −3 551 748 43
    543 T O 8 550 744 42
    543 T CB −12 554 771 42
    543 T OG1 0 562 774 40
    543 T CG2 −17 548 784 41
    544 P N −13 556 740 43
    544 P CA −8 563 728 44
    544 P C 1 574 730 45
    544 P O 0 583 739 45
    544 P CB −22 568 722 44
    544 P CG −31 557 726 43
    544 P CD −27 554 740 42
    545 I N 12 574 723 44
    545 I CA 23 584 724 42
    545 I C 18 596 716 45
    545 I O 15 596 704 45
    545 I CB 36 579 717 40
    545 I CG1 40 565 723 35
    545 I CG2 47 589 720 39
    545 I CD1 51 559 715 36
    546 P N 17 608 723 47
    546 P CA 12 621 717 48
    546 P C 19 626 705 51
    546 P O 13 631 695 51
    546 P CB 13 630 729 49
    546 P CG 24 624 737 51
    546 P CD 20 610 737 47
    547 A N 33 625 704 52
    547 A CA 40 629 693 51
    547 A C 40 620 680 49
    547 A O 47 623 670 49
    547 A CB 55 632 697 52
    548 A N 32 610 681 49
    548 A CA 31 600 670 49
    548 A C 23 606 658 51
    548 A O 26 603 646 51
    548 A CB 25 587 674 45
    549 S N 12 613 661 54
    549 S CA 4 619 651 55
    549 S C 10 630 643 56
    549 S O 6 633 632 59
    549 S CB −8 624 657 52
    549 S OG −6 634 667 52
    550 Q N 21 636 648 55
    550 Q CA 29 646 641 56
    550 Q C 36 641 628 53
    550 Q O 37 649 618 50
    550 Q CB 39 653 650 60
    550 Q CG 35 661 662 66
    550 Q CD 46 667 670 70
    550 Q OE1 56 659 673 69
    550 Q NE2 45 679 674 72
    551 L N 41 629 629 51
    551 L CA 48 623 618 50
    551 L C 41 623 605 50
    551 L O 30 618 604 50
    551 L CB 52 608 622 49
    551 L CG 61 606 634 48
    551 L CD1 62 591 637 43
    551 L CD2 75 612 632 46
    552 D N 48 628 594 48
    552 D CA 42 628 581 49
    552 D C 44 614 574 47
    552 D O 54 612 567 48
    552 D CB 48 639 573 50
    552 D CG 41 642 560 52
    552 D OD1 33 633 555 52
    552 D OD2 44 652 554 54
    553 L N 36 604 577 46
    553 L CA 37 591 572 45
    553 L C 31 589 558 46
    553 L O 30 577 554 44
    553 L CB 33 580 582 43
    553 L CG 44 573 590 45
    553 L CD1 53 583 596 40
    553 L CD2 37 564 600 40
    554 S N 26 599 552 47
    554 S CA 19 598 539 50
    554 S C 30 597 529 50
    554 S O 41 603 530 54
    554 S CB 10 610 536 50
    554 S OG 18 622 535 49
    555 G N 28 588 519 48
    555 G CA 38 586 509 42
    555 G C 46 574 512 39
    555 G O 54 569 504 39
    556 W N 44 568 524 35
    556 W CA 52 557 529 37
    556 W C 48 544 522 38
    556 W O 56 536 517 39
    556 W CB 51 555 544 35
    556 W CG 62 561 551 35
    556 W CD1 66 574 549 32
    556 W CD2 70 556 561 33
    556 W NE1 77 577 558 33
    556 W CE2 79 566 566 34
    556 W CE3 70 543 568 30
    556 W CZ2 88 564 576 33
    556 W CZ3 79 541 578 34
    556 W CH2 88 551 582 35
    557 F N 35 541 521 33
    557 F CA 29 529 515 31
    557 F C 20 533 504 30
    557 F O 8 533 505 30
    557 F CB 22 521 525 27
    557 F CG 31 517 537 28
    557 F CD1 42 508 535 25
    557 F CD2 29 523 549 29
    557 F CE1 50 505 545 25
    557 F CE2 38 520 560 30
    557 F CZ 48 511 558 28
    558 V N 25 538 493 26
    558 V CA 17 543 481 26
    558 V C 22 535 469 26
    558 V O 13 529 462 24
    558 V CB 19 558 479 24
    558 V CG1 11 562 467 29
    558 V CG2 15 565 491 27
    559 A N 35 535 467 24
    559 A CA 40 528 455 24
    559 A C 54 522 457 21
    559 A O 60 525 467 24
    559 A CB 40 537 443 26
    560 G N 57 513 448 22
    560 G CA 71 506 449 23
    560 G C 80 514 441 24
    560 G O 77 519 430 18
    561 Y N 93 515 445 22
    561 Y CA 103 522 438 18
    561 Y C 117 514 437 20
    561 Y O 127 521 435 22
    561 Y CB 106 536 444 16
    561 Y CG 94 545 445 20
    561 Y CD1 89 551 433 19
    561 Y CD2 86 546 457 20
    561 Y CE1 78 559 434 17
    561 Y CE2 75 554 457 23
    561 Y CZ 71 561 446 23
    561 Y OH 59 568 447 20
    562 S N 116 501 438 22
    562 S CA 128 493 438 23
    562 S C 137 496 426 25
    562 S O 132 495 414 25
    562 S CB 125 478 438 23
    562 S OG 136 470 440 31
    563 G N 149 501 428 26
    563 G CA 158 505 417 21
    563 G C 155 519 411 22
    563 G O 163 524 403 25
    564 G N 145 525 416 16
    564 G CA 141 538 411 15
    564 G C 148 551 416 14
    564 G O 143 562 413 16
    565 D N 159 550 423 19
    565 D CA 166 561 428 17
    565 D C 158 572 435 18
    565 D O 159 584 433 17
    565 D CB 173 568 416 19
    565 D CG 185 577 420 25
    565 D OD1 192 574 430 26
    565 D OD2 187 587 413 23
    566 I N 149 567 444 21
    566 I CA 140 576 452 21
    566 I C 144 578 467 22
    566 I O 148 568 474 20
    566 I CB 125 571 451 18
    566 I CG1 121 571 436 17
    566 I CG2 116 579 460 15
    566 I CD1 121 585 429 16
    567 Y N 142 590 472 23
    567 Y CA 146 593 486 27
    567 Y C 135 602 493 35
    567 Y O 129 611 486 34
    567 Y CB 159 600 486 27
    567 Y CG 163 606 500 28
    567 Y CD1 170 598 510 32
    567 Y CD2 161 620 503 27
    567 Y CE1 173 604 522 33
    567 Y CE2 165 625 515 31
    567 Y CZ 171 617 525 35
    567 Y OH 175 622 537 39
    568 H N 134 601 506 40
    568 H CA 124 609 514 43
    568 H C 130 613 527 46
    568 H O 138 605 533 44
    568 H CB 111 602 515 40
    568 H CG 103 601 503 42
    568 H ND1 99 590 497 44
    568 H CD2 98 611 495 40
    568 H CE1 91 592 486 41
    568 H NE2 90 605 485 41
    569 S N 126 624 533 52
    569 S CA 130 629 546 57
    569 S C 145 632 546 60
    569 S O 149 642 540 64
    569 S CB 127 619 557 57
    569 S OG 115 622 564 56
    1001 X OW 165 413 548 8
    1002 X OW 112 514 403 14
    1003 X OW 136 486 313 13
    1004 X OW 91 459 426 16
    1005 X OW 57 632 371 17
    1006 X OW 75 386 325 14
    1007 X OW 23 397 463 18
    1008 X OW 52 499 414 15
    1009 X OW 252 550 342 17
    1010 X OW 229 624 323 18
    1011 X OW 160 565 378 18
    1012 X OW 196 521 276 18
    1013 X OW 33 447 296 18
    1014 X OW 79 518 287 18
    1015 X OW 212 489 291 17
    1016 X OW 252 584 376 16
    1017 X OW 113 500 325 24
    1018 X OW 312 471 360 18
    1019 X OW 81 456 711 16
    1020 X OW 231 575 307 15
    1021 X OW 97 482 449 19
    1022 X OW −38 559 427 24
    1023 X OW −95 504 265 19
    1024 X OW 239 583 267 21
    1025 X OW 81 523 391 17
    1026 X OW 19 654 323 25
    1027 X OW 180 612 403 29
    1028 X OW 4 340 540 18
    1029 X OW 91 415 219 24
    1030 X OW 19 283 472 24
    1031 X OW 307 451 398 19
    1032 X OW 30 421 287 19
    1033 X OW 270 617 443 22
    1034 X OW 6 434 219 20
    1035 X OW −7 537 426 18
    1036 X OW 70 361 648 23
    1037 X OW 7 451 616 31
    1038 X OW 71 460 683 26
    1039 X OW 14 474 596 24
    1040 X OW 298 406 622 13
    1041 X OW 58 525 411 19
    1042 X OW 172 516 231 20
    1043 X OW 48 425 603 17
    1044 X OW 100 333 615 27
    1045 X OW 145 396 380 26
    1046 X OW 234 400 448 27
    1047 X OW 135 450 244 25
    1048 X OW 220 557 646 19
    1049 X OW 377 446 646 18
    1050 X OW 189 447 332 25
    1051 X OW −18 648 396 35
    1052 X OW 22 688 336 21
    1053 X OW 71 455 740 21
    1054 X OW 120 411 227 24
    1055 X OW −69 335 215 24
    1056 X OW 328 503 585 27
    1057 X OW 101 337 546 23
    1058 X OW −108 372 285 26
    1059 X OW 228 432 519 27
    1060 X OW −69 575 268 33
    1061 X OW 257 562 318 25
    1062 X OW 142 540 450 27
    1063 X OW −84 536 269 31
    1064 X OW 304 361 446 27
    1065 X OW 11 258 262 28
    1066 X OW 36 267 276 27
    1067 X OW 284 341 452 26
    1068 X OW 202 399 380 20
    1069 X OW 135 415 550 20
    1070 X OW −13 536 457 22
    1071 X OW 85 508 314 23
    1072 X OW −91 574 386 23
    1073 X OW 11 405 192 21
    1074 X OW 292 576 392 28
    1075 X OW 141 614 166 31
    1076 X OW 123 370 394 24
    1077 X OW 271 573 350 36
    1078 X OW −14 319 244 36
    1079 X OW −62 463 539 25
    1080 X OW −166 406 −146 6
    1081 X OW −112 511 −1 14
    1082 X OW −136 488 90 14
    1083 X OW −92 455 −21 11
    1084 X OW −55 629 27 14
    1085 X OW −76 386 80 24
    1086 X OW −28 381 −56 23
    1087 X OW −52 494 −12 18
    1088 X OW −252 552 58 19
    1089 X OW −226 623 75 23
    1090 X OW −158 564 21 12
    1091 X OW −196 525 127 15
    1092 X OW −35 445 109 19
    1093 X OW −80 517 116 13
    1094 X OW −214 491 112 18
    1095 X OW −250 581 24 20
    1096 X OW −111 498 78 16
    1097 X OW −311 475 40 20
    1098 X OW −80 446 −308 23
    1099 X OW −232 576 92 16
    1100 X OW −97 477 −47 20
    1101 X OW 37 552 −24 15
    1102 X OW 92 502 135 19
    1103 X OW −237 586 135 29
    1104 X OW −81 519 10 20
    1105 X OW −19 651 73 19
    1106 X OW −178 608 −7 17
    1107 X OW −7 332 −135 16
    1108 X OW −96 415 185 19
    1109 X OW −23 278 −70 32
    1110 X OW −307 457 3 21
    1111 X OW −33 420 120 21
    1112 X OW −273 611 −48 22
    1113 X OW −12 431 186 19
    1114 X OW 6 532 −25 18
    1115 X OW −72 355 −244 16
    1116 X OW −9 442 −213 24
    1117 X OW −74 451 −280 28
    1118 X OW −17 468 −193 27
    1119 X OW −300 400 −222 17
    1120 X OW −58 520 −10 24
    1121 X OW −173 520 172 18
    1122 X OW −50 419 −199 23
    1123 X OW −103 327 −211 17
    1124 X OW −148 396 23 25
    1125 X OW −237 397 −46 22
    1126 X OW −138 452 161 21
    1127 X OW −220 553 −247 26
    1128 X OW −376 445 −245 17
    1129 X OW −189 450 71 19
    1130 X OW 15 645 −1 24
    1131 X OW −19 688 56 24
    1132 X OW −71 444 −336 21
    1133 X OW −125 414 175 23
    1134 X OW 66 330 187 32
    1135 X OW −315 495 −144 45
    1136 X OW −106 330 −140 26
    1137 X OW 103 369 122 30
    1138 X OW −226 427 −118 23
    1139 X OW 50 604 151 51
    1140 X OW −255 563 83 23
    1141 X OW −140 536 −50 20
    1142 X OW 68 571 134 39
    1143 X OW −303 365 −42 35
    1144 X OW −17 253 146 36
    1145 X OW −42 265 131 23
    1146 X OW −290 344 −54 27
    1147 X OW −206 397 21 19
    1148 X OW −135 409 −145 22
    1149 X OW 13 526 −54 27
    1150 X OW −82 508 86 32
    1151 X OW 89 570 14 23
    1152 X OW −14 405 210 24
    1153 X OW −289 572 12 33
    1154 X OW −143 621 230 29
    1155 X OW −129 368 11 34
    1156 X OW −266 574 47 28
    1157 X OW 3 319 162 36
    1158 X OW 60 453 −137 21
    1159 X OW −29 324 −245 26
    1160 X OW 186 430 590 22
    1161 X OW −186 423 −190 24
    1162 X OW −51 306 −201 22
    1163 X OW −27 295 −209 26
    1164 X OW 74 331 547 25
    1165 X OW 105 465 471 20
    1166 X OW −157 291 −305 23
    1167 X OW 21 429 604 25
    1168 X OW −30 273 296 25
    1169 X OW 155 296 708 20
    1170 X OW 222 580 723 21
    1171 X OW 200 291 693 25
    1172 X OW −62 355 13 27
    1173 X OW 133 479 502 21
    1174 X OW −40 518 173 21
    1175 X OW −215 573 −99 28
    1176 X OW −111 165 440 49
    1177 X OW −158 336 −146 28
    1178 X OW 232 621 295 25
    1179 X OW −306 459 −23 27
    1180 X OW 14 517 −131 29
    1181 X OW −163 355 −111 29
    1182 X OW 155 346 549 25
    1183 X OW −226 371 −45 27
    1184 X OW −304 392 −312 31
    1185 X OW 142 464 828 25
    1186 X OW −161 501 −51 25
    1187 X OW 143 582 390 29
    1188 X OW −274 748 −6 28
    1189 X OW −152 288 −339 23
    1190 X OW 239 419 716 27
    1191 X OW −32 518 683 28
    1192 X OW −201 334 −124 25
    1193 X OW −233 620 102 21
    1194 X OW −326 342 −155 28
    1195 X OW 372 430 750 52
    1196 X OW −103 459 −68 28
    1197 X OW 216 583 498 26
    1198 X OW −354 354 −61 38
    1199 X OW 104 163 52 29
    1200 X OW 60 293 420 26
    1201 X OW −177 277 −288 27
    1202 X OW −128 556 221 32
    1203 X OW −348 406 29 38
    1204 X OW −269 371 166 29
    1205 X OW −233 546 −169 32
    1206 X OW −11 527 534 29
    1207 X OW −241 439 −137 31
    1208 X OW −58 454 236 29
    1209 X OW −239 381 −438 27
    1210 X OW 150 628 741 38
    1211 X OW −96 256 406 26
    1212 X OW 349 489 249 26
    1213 X OW 110 418 851 26
    1214 X OW 244 596 295 26
    1215 X OW −140 453 −425 28
    1216 X OW 28 440 −326 27
    1217 X OW −160 537 210 25
    1218 X OW −76 325 −141 30
    1219 X OW 80 456 −91 32
    1220 X OW 36 263 115 39
    1221 X OW 194 731 277 25
    1222 X OW 220 587 240 28
    1223 X OW 128 412 393 30
    1224 X OW −74 370 −345 40
    1225 X OW −337 381 −277 33
    1226 X OW 245 546 642 29
    1227 X OW −100 660 −56 24
    1228 X OW 113 707 214 32
    1229 X OW −319 479 −37 29
    1230 X OW −127 471 −101 28
    1231 X OW −166 430 −136 43
    1232 X OW 117 369 −315 40
    1233 X OW −21 421 −197 27
    1234 X OW −272 480 174 27
    1235 X OW −51 348 −53 30
    1236 X OW 175 526 439 25
    1237 X OW −69 310 208 31
    1238 X OW −75 312 159 29
    1239 X OW −91 686 −65 31
    1240 X OW −324 398 54 29
    1241 X OW −174 524 −38 31
    1242 X OW 152 299 743 25
    1243 X OW −83 248 −210 26
    1244 X OW −103 436 −3 23
    1245 X OW −119 458 −141 37
    1246 X OW −97 634 −184 31
    1247 X OW −164 483 −148 25
    1248 X OW 147 450 217 37
    1249 X OW 86 375 52 26
    1250 X OW −311 567 −302 31
    1251 X OW 199 340 528 31
    1252 X OW 39 294 492 34
    1253 X OW 106 396 −78 25
    1254 X OW 385 483 262 29
    1255 X OW −228 759 −46 34
    1256 X OW 60 615 −30 44
    1257 X OW 164 489 552 27
    1258 X OW −85 392 180 28
    1259 X OW −19 257 −232 27
    1260 X OW −142 578 6 24
    1261 X OW 49 330 725 24
    1262 X OW −33 445 220 25
    1263 X OW 81 452 −119 28
    1264 X OW −86 584 −317 30
    1265 X OW −360 406 −149 27
    1266 X OW −57 246 122 32
    1267 X OW 53 548 487 26
    1268 X OW 307 406 286 27
    1269 X OW 60 396 −227 22
    1270 X OW 349 496 603 32
    1271 X OW 104 439 407 31
    1272 X OW 121 430 129 31
    1273 X OW 91 361 412 28
    1274 X OW 188 631 269 29
    1275 X OW −332 481 −398 61
    1276 X OW 125 329 766 28
    1277 X OW 294 589 437 28
    1278 X OW −192 637 241 57
    1279 X OW 28 335 653 26
    1280 X OW 146 251 −49 28
    1281 X OW −38 704 111 27
    1282 X OW −240 367 168 26
    1283 X OW 233 554 569 33
    1284 X OW −48 290 −85 29
    1285 X OW 174 436 537 34
    1286 X OW −237 435 198 35
    1287 X OW 75 489 −57 30
    1288 X OW −8 178 28 37
    1289 X OW 165 699 471 29
    1290 X OW −227 224 −98 39
    1291 X OW −170 515 −447 35
    1292 X OW −202 284 −294 27
    1293 X OW 60 357 392 30
    1294 X OW 41 516 230 35
    1295 X OW 41 614 354 36
    1296 X OW −214 619 123 24
    1297 X OW 45 312 606 32
    1298 X OW 74 399 −9 30
    1299 X OW −40 235 38 26
    1300 X OW 350 516 769 34
    1301 X OW 201 692 246 26
    1302 X OW 196 552 451 30
    1303 X OW 266 367 234 29
    1304 X OW 307 398 711 28
    1305 X OW −79 327 −41 34
    1306 X OW −245 542 −239 37
    1307 X OW 70 367 740 26
    1308 X OW 240 483 520 34
    1309 X OW −228 461 −140 35
    1310 X OW 104 461 −28 27
    1311 X OW −299 700 −8 26
    1312 X OW −75 447 204 28
    1313 X OW 327 345 566 29
    1314 X OW −79 495 465 44
    1315 X OW −23 541 173 32
    1316 X OW 47 695 242 29
    1317 X OW 32 448 767 30
    1318 X OW 283 662 447 27
    1319 X OW −241 410 −314 33
    1320 X OW 147 443 394 30
    1321 X OW −188 635 128 30
    1322 X OW −6 607 −185 33
    1323 X OW −361 413 0 31
    1324 X OW 212 616 275 31
    1325 X OW −362 291 −66 44
    1326 X OW 23 662 69 28
    1327 X OW 11 573 −292 30
    1328 X OW −99 499 102 74
    1329 X OW −61 288 −13 30
    1330 X OW −330 498 −186 22
    1331 X OW 116 477 73 29
    1332 X OW −191 430 −1 29
    1333 X OW −24 404 −59 34
    1334 X OW −81 442 344 27
    1335 X OW 9 683 61 41
    1336 X OW −6 219 400 33
    1337 X OW −38 274 −48 45
    1338 X OW 152 406 227 29
    1339 X OW −55 504 582 34
    1340 X OW 256 315 706 39
    1341 X OW 118 504 142 34
    1342 X OW 12 496 −186 30
    1343 X OW 132 721 230 35
    1344 X OW 175 544 389 27
    1345 X OW −176 620 106 66
    1346 X OW −99 252 514 36
    1347 X OW 60 307 199 34
    1348 X OW 375 437 307 30
    1349 X OW 208 719 254 33
    1350 X OW 139 425 212 25
    1351 X OW 268 480 227 28
    1352 X OW −23 247 283 32
    1353 X OW −78 473 −394 28
    1354 X OW −15 539 509 34
    1355 X OW −85 597 −147 25
    1356 X OW 41 299 171 31
    1357 X OW −250 576 −380 49
    1358 X OW 213 313 256 33
    1359 X OW −135 487 276 31
    1360 X OW 319 394 343 25
    1361 X OW 85 665 72 29
    1362 X OW 161 362 512 32
    1363 X OW −130 468 129 54
    1364 X OW 222 539 811 42
    1365 X OW −46 405 −346 30
    1366 X OW 332 704 344 28
    1367 X OW 300 535 329 38
    1368 X OW 14 241 130 32
    1369 X OW 100 661 49 27
    1370 X OW −118 458 359 59
    1371 X OW 227 317 496 25
    1372 X OW 367 468 634 30
    1373 X OW −130 531 279 27
    1374 X OW 7 524 −171 34
    1375 X OW 130 525 124 27
    1376 X OW 247 528 789 33
    1377 X OW 2 156 439 55
    1378 X OW 158 237 −70 29
    1379 X OW 119 168 74 28
    1380 X OW −66 610 424 38
    1381 X OW 146 720 297 53
    1382 X OW 73 600 104 28
    1383 X OW 350 547 796 38
    1384 X OW −69 651 −53 29
    1385 X OW −134 475 301 46
    1386 X OW −308 542 −372 30
    1387 X OW 345 361 712 50
    END
    # coordinates of the second monomer (x2, y2, z2) are related to the coordinates of the first monomer (x1, y1, z1) listed below according to the following oPeration:
  • [0093]
  • 1 1 1 576 PRT Hepatitis C virus VARIANT (335) amino acids at 335, 344 and 550 may be threonine or valine at 335, valine or alanine at 344 and arginine or glutamine at 550 1 Ala Ser His His His His His His Ser Tyr Thr Trp Thr Gly Ala Leu 1 5 10 15 Ile Thr Pro Cys Ala Ala Glu Glu Ser Lys Leu Pro Ile Asn Ala Leu 20 25 30 Ser Asn Ser Leu Leu Arg His His Asn Met Val Tyr Ala Thr Thr Ser 35 40 45 Arg Ser Ala Gly Leu Arg Gln Lys Lys Val Thr Phe Asp Arg Leu Gln 50 55 60 Val Leu Asp Asp His Tyr Arg Asp Val Leu Lys Glu Met Lys Ala Lys 65 70 75 80 Ala Ser Thr Val Lys Ala Lys Leu Leu Ser Val Glu Glu Ala Cys Lys 85 90 95 Leu Thr Pro Pro His Ser Ala Lys Ser Lys Phe Gly Tyr Gly Ala Lys 100 105 110 Asp Val Arg Asn Leu Ser Ser Lys Ala Val Asn His Ile His Ser Val 115 120 125 Trp Lys Asp Leu Leu Glu Asp Thr Val Thr Pro Ile Asp Thr Thr Ile 130 135 140 Met Ala Lys Asn Glu Val Phe Cys Val Gln Pro Glu Lys Gly Gly Arg 145 150 155 160 Lys Pro Ala Arg Leu Ile Val Phe Pro Asp Leu Gly Val Arg Val Cys 165 170 175 Glu Lys Met Ala Leu Tyr Asp Val Val Ser Thr Leu Pro Gln Val Val 180 185 190 Met Gly Ser Ser Tyr Gly Phe Gln Tyr Ser Pro Gly Gln Arg Val Glu 195 200 205 Phe Leu Val Asn Thr Trp Lys Ser Lys Lys Asn Pro Met Gly Phe Ser 210 215 220 Tyr Asp Thr Arg Cys Phe Asp Ser Thr Val Thr Glu Asn Asp Ile Arg 225 230 235 240 Val Glu Glu Ser Ile Tyr Gln Cys Cys Asp Leu Ala Pro Glu Ala Arg 245 250 255 Gln Ala Ile Lys Ser Leu Thr Glu Arg Leu Tyr Ile Gly Gly Pro Leu 260 265 270 Thr Asn Ser Lys Gly Gln Asn Cys Gly Tyr Arg Arg Cys Arg Ala Ser 275 280 285 Gly Val Leu Thr Thr Ser Cys Gly Asn Thr Leu Thr Cys Tyr Leu Lys 290 295 300 Ala Ser Ala Ala Cys Arg Ala Ala Lys Leu Gln Asp Cys Thr Met Leu 305 310 315 320 Val Asn Gly Asp Asp Leu Val Val Ile Cys Glu Ser Ala Gly Xaa Gln 325 330 335 Glu Asp Ala Ala Ser Leu Arg Xaa Phe Thr Glu Ala Met Thr Arg Tyr 340 345 350 Ser Ala Pro Pro Gly Asp Pro Pro Gln Pro Glu Tyr Asp Leu Glu Leu 355 360 365 Ile Thr Ser Cys Ser Ser Asn Val Ser Val Ala His Asp Ala Ser Gly 370 375 380 Lys Arg Val Tyr Tyr Leu Thr Arg Asp Pro Thr Thr Pro Leu Ala Arg 385 390 395 400 Ala Ala Trp Glu Thr Ala Arg His Thr Pro Val Asn Ser Trp Leu Gly 405 410 415 Asn Ile Ile Met Tyr Ala Pro Thr Leu Trp Ala Arg Met Ile Leu Met 420 425 430 Thr His Phe Phe Ser Ile Leu Leu Ala Gln Glu Gln Leu Glu Lys Ala 435 440 445 Leu Asp Cys Gln Ile Tyr Gly Ala Cys Tyr Ser Ile Glu Pro Leu Asp 450 455 460 Leu Pro Gln Ile Ile Glu Arg Leu His Gly Leu Ser Ala Phe Ser Leu 465 470 475 480 His Ser Tyr Ser Pro Gly Glu Ile Asn Arg Val Ala Ser Cys Leu Arg 485 490 495 Lys Leu Gly Val Pro Pro Leu Arg Val Trp Arg His Arg Ala Arg Ser 500 505 510 Val Arg Ala Arg Leu Leu Ser Gln Gly Gly Arg Ala Ala Thr Cys Gly 515 520 525 Lys Tyr Leu Phe Asn Trp Ala Val Lys Thr Lys Leu Lys Leu Thr Pro 530 535 540 Ile Pro Ala Ala Ser Xaa Leu Asp Leu Ser Gly Trp Phe Val Ala Gly 545 550 555 560 Tyr Ser Gly Gly Asp Ile Tyr His Ser Leu Ser Arg Ala Arg Pro Arg 565 570 575

Claims (23)

We claim:
1. A crystalline composition comprising a HCV NS5B polypeptide.
2. The composition of claim 1 wherein the HCV NS5B polypeptide comprises tNS5B.
3. A composition comprising a NS5B protein having at least one amino acid substitution at position 335, 344 or 550 of SEQ ID NO: 1.
4. The composition according to claim 3 wherein the amino acid substitution at position 335 is a threonine to a valine substitution.
5. The composition according to claim 3, wherein the amino acid substitution at position 344 is a valine to an alanine substitution.
6. The composition according to claim 3, wherein the amino acid substitution at position 550 is an arginine to a glutamine substitution.
7. A composition comprising a NS5B protein having at least one amino acid substitution at position 335, 344 or 550 of a histidine-tagged NS5B protein.
8. The composition according to claim 7, wherein the NS5B protein comprises SEQ ID NO: 1.
9. A method of preparing purified, crystalline HCV NS5B comprising the steps of:
(a) stabilizing a NS5B protein preparation in a solution containing a protein stabilizing agent;
(b) subjecting the NS5B protein preparation to cation exchange chromatography in a buffer containing glycine; and
(c) allowing crystals to form in a precipitant containing a protein stabilizing agent, a salt and polyethylene glycol under conditions in which crystallization occurs.
10. The method of claim 9 wherein the NS5B protein preparation comprises tNS5B.
11. The method of claim 9 wherein the glycine is removed from the NS5B protein preparation after cation exchange chromatography.
12. The method of claim 11, wherein the glycine is removed by dialysis.
13. The method of claim 9 wherein the crystals are allowed to form using a microbatch method.
14. The method of claim 9, wherein the crystals are allowed to form using vapor diffusion.
15. The method of claim 9, wherein the protein stabilizing agent is glycerol.
16. The method of claim 15, wherein the glycerol is provided at a concentration of 10% (volume/volume).
17. The method of claim 9, wherein glycine is provided at a concentration of one molar.
18. The method of claim 9, wherein the polyethylene glycol has a molecular weight of 4000-5000 daltons.
19. A machine-readable data storage medium, comprising a data storage material encoded with machine readable data, wherein the data is defined by the structure coordinates of a NS5B polypeptide according to Table 1, or a homologue thereof wherein said homologue comprises alpha carbon atoms that have a root mean square deviation between equivalent alpha carbon atoms of the polypeptide of not more than 3.0 Å.
20. A method of obtaining structural information concerning a molecule of unknown structure by using the structure coordinates set forth in Table 1, comprising the steps of:
(a) generating x-ray diffraction data from said crystallized molecule; and
(b) applying crystallographic phases derived from at least a portion of the structure coordinates set forth in Table 1 to said x-ray diffraction pattern to generate a three-dimensional electron density map of at least a portion of the molecule.
21. The method of claim 20, wherein the molecule is a polymerase.
22. A method of obtaining structural information concerning a molecular complex of unknown structure by using the structure coordinates set forth in Table 1, comprising the steps of:
(a) generating x-ray diffraction data from said crystallized molecule; and
(b) applying crystallographic phases derived from at least a portion of the structure coordinates set forth in Table 1 to said x-ray diffraction pattern to generate a three-dimensional electron density map of at least a portion of the molecule.
23. The method of claim 22, wherein the molecular complex contains a NS5B polypeptide.
US10/170,131 2000-04-03 2002-06-12 Compositions of hepatitis C virus NS5B polymerase and methods for crystallizing same Abandoned US20030171874A1 (en)

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WO2005001417A2 (en) * 2003-06-05 2005-01-06 Pharmacia & Upjohn Company Crystals of hepatitis c virus polymerase and/or hepatitis c virus polymerase-like proteins and the use thereof
US7816348B2 (en) * 2006-02-03 2010-10-19 Boehringer Ingelheim International Gmbh Viral polymerase inhibitors
US20100286131A1 (en) * 2007-08-03 2010-11-11 Boehringer Ingelheim International Gmbh Viral polymerase inhibitors
US8242140B2 (en) * 2007-08-03 2012-08-14 Boehringer Ingelheim International Gmbh Viral polymerase inhibitors
BRPI0821342A2 (en) * 2007-12-19 2019-09-24 Boehringer Ingelheim Int viral polymerase inhibitors

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