US20020183558A1 - Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and alpha, beta-unsaturated carboxylic acid and aldehyde compounds - Google Patents
Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and alpha, beta-unsaturated carboxylic acid and aldehyde compounds Download PDFInfo
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- US20020183558A1 US20020183558A1 US10/107,771 US10777102A US2002183558A1 US 20020183558 A1 US20020183558 A1 US 20020183558A1 US 10777102 A US10777102 A US 10777102A US 2002183558 A1 US2002183558 A1 US 2002183558A1
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- alkyl
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- independently
- polymeric
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- -1 aldehyde compounds Chemical class 0.000 title claims abstract description 333
- 238000000034 method Methods 0.000 title claims abstract description 169
- 230000008569 process Effects 0.000 title claims abstract description 136
- 239000002253 acid Substances 0.000 title claims abstract description 88
- NEAQRZUHTPSBBM-UHFFFAOYSA-N 2-hydroxy-3,3-dimethyl-7-nitro-4h-isoquinolin-1-one Chemical compound C1=C([N+]([O-])=O)C=C2C(=O)N(O)C(C)(C)CC2=C1 NEAQRZUHTPSBBM-UHFFFAOYSA-N 0.000 title claims abstract description 74
- 150000001299 aldehydes Chemical class 0.000 title claims abstract description 33
- 150000007934 α,β-unsaturated carboxylic acids Chemical class 0.000 title claims abstract description 7
- 150000002576 ketones Chemical class 0.000 title abstract description 21
- 150000001412 amines Chemical class 0.000 title abstract description 13
- 150000002923 oximes Chemical class 0.000 title abstract description 6
- 238000010532 solid phase synthesis reaction Methods 0.000 title abstract description 6
- 229920005989 resin Polymers 0.000 claims abstract description 550
- 239000011347 resin Substances 0.000 claims abstract description 550
- 150000001875 compounds Chemical class 0.000 claims abstract description 156
- AVXURJPOCDRRFD-UHFFFAOYSA-N Hydroxylamine Chemical compound ON AVXURJPOCDRRFD-UHFFFAOYSA-N 0.000 claims abstract description 56
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical group C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 claims description 320
- MYRTYDVEIRVNKP-UHFFFAOYSA-N 1,2-Divinylbenzene Chemical compound C=CC1=CC=CC=C1C=C MYRTYDVEIRVNKP-UHFFFAOYSA-N 0.000 claims description 272
- 125000000217 alkyl group Chemical group 0.000 claims description 165
- OKKJLVBELUTLKV-UHFFFAOYSA-N methanol Natural products OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 claims description 144
- 239000000203 mixture Substances 0.000 claims description 120
- 238000006243 chemical reaction Methods 0.000 claims description 99
- 125000003118 aryl group Chemical group 0.000 claims description 92
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 81
- 125000003545 alkoxy group Chemical group 0.000 claims description 73
- 229910052736 halogen Inorganic materials 0.000 claims description 73
- 125000005647 linker group Chemical group 0.000 claims description 71
- 125000000449 nitro group Chemical group [O-][N+](*)=O 0.000 claims description 68
- 238000002360 preparation method Methods 0.000 claims description 61
- IJGRMHOSHXDMSA-UHFFFAOYSA-N nitrogen Substances N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims description 59
- 150000002367 halogens Chemical group 0.000 claims description 56
- 125000001072 heteroaryl group Chemical group 0.000 claims description 55
- 125000001931 aliphatic group Chemical group 0.000 claims description 53
- 150000002825 nitriles Chemical group 0.000 claims description 50
- 229910052757 nitrogen Inorganic materials 0.000 claims description 50
- 229910052739 hydrogen Inorganic materials 0.000 claims description 47
- 125000004432 carbon atom Chemical group C* 0.000 claims description 42
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims description 40
- 239000007787 solid Substances 0.000 claims description 40
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 39
- 150000001413 amino acids Chemical class 0.000 claims description 37
- 239000002904 solvent Substances 0.000 claims description 37
- 239000003153 chemical reaction reagent Substances 0.000 claims description 33
- 125000002947 alkylene group Chemical group 0.000 claims description 32
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 32
- 125000000623 heterocyclic group Chemical group 0.000 claims description 32
- 229910052799 carbon Inorganic materials 0.000 claims description 31
- 239000001257 hydrogen Substances 0.000 claims description 28
- 125000003710 aryl alkyl group Chemical group 0.000 claims description 25
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims description 25
- 125000001424 substituent group Chemical group 0.000 claims description 25
- 125000000392 cycloalkenyl group Chemical group 0.000 claims description 24
- 229910052760 oxygen Inorganic materials 0.000 claims description 22
- 125000006242 amine protecting group Chemical group 0.000 claims description 21
- 229910052717 sulfur Inorganic materials 0.000 claims description 21
- 229910052731 fluorine Inorganic materials 0.000 claims description 19
- 238000005859 coupling reaction Methods 0.000 claims description 18
- 150000004678 hydrides Chemical group 0.000 claims description 17
- 125000004450 alkenylene group Chemical group 0.000 claims description 16
- 239000001301 oxygen Substances 0.000 claims description 16
- 125000004475 heteroaralkyl group Chemical group 0.000 claims description 15
- 125000004433 nitrogen atom Chemical group N* 0.000 claims description 15
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims description 14
- 239000003638 chemical reducing agent Substances 0.000 claims description 14
- 230000008878 coupling Effects 0.000 claims description 14
- 238000010168 coupling process Methods 0.000 claims description 14
- 125000001153 fluoro group Chemical group F* 0.000 claims description 14
- 150000002443 hydroxylamines Chemical class 0.000 claims description 14
- 239000012280 lithium aluminium hydride Substances 0.000 claims description 14
- 125000004419 alkynylene group Chemical group 0.000 claims description 13
- 125000005349 heteroarylcycloalkyl group Chemical group 0.000 claims description 13
- OZAIFHULBGXAKX-UHFFFAOYSA-N 2-(2-cyanopropan-2-yldiazenyl)-2-methylpropanenitrile Chemical group N#CC(C)(C)N=NC(C)(C)C#N OZAIFHULBGXAKX-UHFFFAOYSA-N 0.000 claims description 12
- 229910010084 LiAlH4 Inorganic materials 0.000 claims description 12
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical compound [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 claims description 12
- 125000003342 alkenyl group Chemical group 0.000 claims description 12
- 125000000304 alkynyl group Chemical group 0.000 claims description 12
- 125000004350 aryl cycloalkyl group Chemical group 0.000 claims description 11
- 125000002524 organometallic group Chemical group 0.000 claims description 11
- 125000004218 chloromethyl group Chemical group [H]C([H])(Cl)* 0.000 claims description 10
- 125000004367 cycloalkylaryl group Chemical group 0.000 claims description 9
- 125000005215 cycloalkylheteroaryl group Chemical group 0.000 claims description 9
- 239000003999 initiator Substances 0.000 claims description 9
- 229910052701 rubidium Inorganic materials 0.000 claims description 9
- RMVRSNDYEFQCLF-UHFFFAOYSA-N thiophenol Chemical compound SC1=CC=CC=C1 RMVRSNDYEFQCLF-UHFFFAOYSA-N 0.000 claims description 9
- 229920001367 Merrifield resin Polymers 0.000 claims description 8
- 239000004793 Polystyrene Substances 0.000 claims description 8
- 125000001584 benzyloxycarbonyl group Chemical group C(=O)(OCC1=CC=CC=C1)* 0.000 claims description 8
- 125000004093 cyano group Chemical group *C#N 0.000 claims description 8
- 229910052751 metal Inorganic materials 0.000 claims description 8
- 239000002184 metal Substances 0.000 claims description 8
- 229920002223 polystyrene Polymers 0.000 claims description 8
- HBAHZZVIEFRTEY-UHFFFAOYSA-N 2-heptylcyclohex-2-en-1-one Chemical compound CCCCCCCC1=CCCCC1=O HBAHZZVIEFRTEY-UHFFFAOYSA-N 0.000 claims description 7
- 239000003875 Wang resin Substances 0.000 claims description 7
- NERFNHBZJXXFGY-UHFFFAOYSA-N [4-[(4-methylphenyl)methoxy]phenyl]methanol Chemical compound C1=CC(C)=CC=C1COC1=CC=C(CO)C=C1 NERFNHBZJXXFGY-UHFFFAOYSA-N 0.000 claims description 7
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims description 7
- 150000001768 cations Chemical class 0.000 claims description 7
- SQDFHQJTAWCFIB-UHFFFAOYSA-N n-methylidenehydroxylamine Chemical compound ON=C SQDFHQJTAWCFIB-UHFFFAOYSA-N 0.000 claims description 7
- 238000006894 reductive elimination reaction Methods 0.000 claims description 7
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims description 6
- 239000002168 alkylating agent Substances 0.000 claims description 6
- 229940100198 alkylating agent Drugs 0.000 claims description 6
- 239000011260 aqueous acid Substances 0.000 claims description 6
- 150000002148 esters Chemical class 0.000 claims description 6
- 238000004519 manufacturing process Methods 0.000 claims description 6
- UYWQUFXKFGHYNT-UHFFFAOYSA-N phenylmethyl ester of formic acid Natural products O=COCC1=CC=CC=C1 UYWQUFXKFGHYNT-UHFFFAOYSA-N 0.000 claims description 6
- 239000011593 sulfur Substances 0.000 claims description 6
- 125000004415 heterocyclylalkyl group Chemical group 0.000 claims description 5
- 229920000642 polymer Polymers 0.000 claims description 5
- 229910052703 rhodium Inorganic materials 0.000 claims description 5
- DBGVGMSCBYYSLD-UHFFFAOYSA-N tributylstannane Chemical group CCCC[SnH](CCCC)CCCC DBGVGMSCBYYSLD-UHFFFAOYSA-N 0.000 claims description 5
- UWTDFICHZKXYAC-UHFFFAOYSA-N boron;oxolane Chemical group [B].C1CCOC1 UWTDFICHZKXYAC-UHFFFAOYSA-N 0.000 claims description 4
- 125000002993 cycloalkylene group Chemical group 0.000 claims description 4
- 125000005842 heteroatom Chemical group 0.000 claims description 4
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 4
- 125000004217 4-methoxybenzyl group Chemical group [H]C1=C([H])C(=C([H])C([H])=C1OC([H])([H])[H])C([H])([H])* 0.000 claims description 3
- 229920000620 organic polymer Polymers 0.000 claims description 3
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 claims description 3
- 125000006570 (C5-C6) heteroaryl group Chemical group 0.000 claims description 2
- 150000001335 aliphatic alkanes Chemical class 0.000 claims description 2
- 150000001728 carbonyl compounds Chemical class 0.000 claims description 2
- 239000005289 controlled pore glass Substances 0.000 claims description 2
- 229920001577 copolymer Polymers 0.000 claims description 2
- 150000001924 cycloalkanes Chemical class 0.000 claims description 2
- CJGBPPZRFOVLNI-UHFFFAOYSA-N cyclohexane;oxolane Chemical compound C1CCOC1.C1CCCCC1 CJGBPPZRFOVLNI-UHFFFAOYSA-N 0.000 claims description 2
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 claims description 2
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 claims description 2
- 229940002612 prodrug Drugs 0.000 claims description 2
- 239000000651 prodrug Substances 0.000 claims description 2
- 150000003839 salts Chemical class 0.000 claims description 2
- 239000012453 solvate Substances 0.000 claims description 2
- 229910052794 bromium Inorganic materials 0.000 claims 2
- 229910052801 chlorine Inorganic materials 0.000 claims 2
- OVSKIKFHRZPJSS-UHFFFAOYSA-N 2,4-D Chemical compound OC(=O)COC1=CC=C(Cl)C=C1Cl OVSKIKFHRZPJSS-UHFFFAOYSA-N 0.000 claims 1
- 229910020889 NaBH3 Inorganic materials 0.000 claims 1
- IOVCWXUNBOPUCH-UHFFFAOYSA-M Nitrite anion Chemical compound [O-]N=O IOVCWXUNBOPUCH-UHFFFAOYSA-M 0.000 claims 1
- 125000005931 tert-butyloxycarbonyl group Chemical group [H]C([H])([H])C(OC(*)=O)(C([H])([H])[H])C([H])([H])[H] 0.000 claims 1
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 334
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 277
- 0 C*ON([Rb])C(=O)[RaH] Chemical compound C*ON([Rb])C(=O)[RaH] 0.000 description 141
- HEDRZPFGACZZDS-MICDWDOJSA-N Trichloro(2H)methane Chemical compound [2H]C(Cl)(Cl)Cl HEDRZPFGACZZDS-MICDWDOJSA-N 0.000 description 70
- 239000000243 solution Substances 0.000 description 67
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical class CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 66
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 66
- 238000004895 liquid chromatography mass spectrometry Methods 0.000 description 65
- 238000003756 stirring Methods 0.000 description 59
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 51
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 45
- 229940024606 amino acid Drugs 0.000 description 39
- 235000001014 amino acid Nutrition 0.000 description 39
- 238000005160 1H NMR spectroscopy Methods 0.000 description 34
- 238000011068 loading method Methods 0.000 description 31
- 125000006413 ring segment Chemical group 0.000 description 31
- 239000011541 reaction mixture Substances 0.000 description 30
- 239000000725 suspension Substances 0.000 description 29
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 23
- GQHTUMJGOHRCHB-UHFFFAOYSA-N 2,3,4,6,7,8,9,10-octahydropyrimido[1,2-a]azepine Chemical compound C1CCCCN2CCCN=C21 GQHTUMJGOHRCHB-UHFFFAOYSA-N 0.000 description 22
- 230000015572 biosynthetic process Effects 0.000 description 22
- 150000003254 radicals Chemical class 0.000 description 22
- 238000003786 synthesis reaction Methods 0.000 description 22
- 125000006239 protecting group Chemical group 0.000 description 19
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 16
- 229960004132 diethyl ether Drugs 0.000 description 16
- LMDZBCPBFSXMTL-UHFFFAOYSA-N 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide Chemical compound CCN=C=NCCCN(C)C LMDZBCPBFSXMTL-UHFFFAOYSA-N 0.000 description 15
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 15
- 150000001732 carboxylic acid derivatives Chemical class 0.000 description 15
- 238000002330 electrospray ionisation mass spectrometry Methods 0.000 description 15
- JWVTWJNGILGLAT-UHFFFAOYSA-N 1-ethenyl-4-fluorobenzene Chemical compound FC1=CC=C(C=C)C=C1 JWVTWJNGILGLAT-UHFFFAOYSA-N 0.000 description 14
- OKKJLVBELUTLKV-MZCSYVLQSA-N Deuterated methanol Chemical compound [2H]OC([2H])([2H])[2H] OKKJLVBELUTLKV-MZCSYVLQSA-N 0.000 description 13
- 238000013019 agitation Methods 0.000 description 13
- 125000004122 cyclic group Chemical group 0.000 description 13
- 125000004356 hydroxy functional group Chemical group O* 0.000 description 13
- FPQQSJJWHUJYPU-UHFFFAOYSA-N 3-(dimethylamino)propyliminomethylidene-ethylazanium;chloride Chemical compound Cl.CCN=C=NCCCN(C)C FPQQSJJWHUJYPU-UHFFFAOYSA-N 0.000 description 12
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 description 12
- 150000001204 N-oxides Chemical class 0.000 description 12
- 238000000921 elemental analysis Methods 0.000 description 12
- 125000000524 functional group Chemical group 0.000 description 12
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 11
- 238000001035 drying Methods 0.000 description 11
- 239000000706 filtrate Substances 0.000 description 11
- 238000005406 washing Methods 0.000 description 11
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 10
- 238000005903 acid hydrolysis reaction Methods 0.000 description 10
- 239000000047 product Substances 0.000 description 10
- 229910052938 sodium sulfate Inorganic materials 0.000 description 10
- 125000004434 sulfur atom Chemical group 0.000 description 10
- MYMOFIZGZYHOMD-UHFFFAOYSA-N Dioxygen Chemical compound O=O MYMOFIZGZYHOMD-UHFFFAOYSA-N 0.000 description 9
- 241000534944 Thia Species 0.000 description 9
- 238000004458 analytical method Methods 0.000 description 9
- 125000003917 carbamoyl group Chemical group [H]N([H])C(*)=O 0.000 description 9
- 238000003776 cleavage reaction Methods 0.000 description 9
- NFHFRUOZVGFOOS-UHFFFAOYSA-N palladium;triphenylphosphane Chemical compound [Pd].C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1.C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 NFHFRUOZVGFOOS-UHFFFAOYSA-N 0.000 description 9
- 102000004196 processed proteins & peptides Human genes 0.000 description 9
- 230000007017 scission Effects 0.000 description 9
- 239000007790 solid phase Substances 0.000 description 9
- JBLIDPPHFGWTKU-UHFFFAOYSA-N 2,6-dichlorobenzoyl chloride Chemical compound ClC(=O)C1=C(Cl)C=CC=C1Cl JBLIDPPHFGWTKU-UHFFFAOYSA-N 0.000 description 8
- XDTMQSROBMDMFD-UHFFFAOYSA-N Cyclohexane Chemical compound C1CCCCC1 XDTMQSROBMDMFD-UHFFFAOYSA-N 0.000 description 8
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 8
- 125000002252 acyl group Chemical group 0.000 description 8
- 230000008901 benefit Effects 0.000 description 8
- 229940126214 compound 3 Drugs 0.000 description 8
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 8
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 8
- 238000010647 peptide synthesis reaction Methods 0.000 description 8
- 239000002798 polar solvent Substances 0.000 description 8
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 8
- CFMZSMGAMPBRBE-UHFFFAOYSA-N 2-hydroxyisoindole-1,3-dione Chemical compound C1=CC=C2C(=O)N(O)C(=O)C2=C1 CFMZSMGAMPBRBE-UHFFFAOYSA-N 0.000 description 7
- BQXUPNKLZNSUMC-YUQWMIPFSA-N CCN(CCCCCOCC(=O)N[C@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@@H](C)c1ccc(cc1)-c1scnc1C)C(C)(C)C)CCOc1ccc(cc1)C(=O)c1c(sc2cc(O)ccc12)-c1ccc(O)cc1 Chemical compound CCN(CCCCCOCC(=O)N[C@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)N[C@@H](C)c1ccc(cc1)-c1scnc1C)C(C)(C)C)CCOc1ccc(cc1)C(=O)c1c(sc2cc(O)ccc12)-c1ccc(O)cc1 BQXUPNKLZNSUMC-YUQWMIPFSA-N 0.000 description 7
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 description 7
- 229940125904 compound 1 Drugs 0.000 description 7
- 239000003960 organic solvent Substances 0.000 description 7
- 125000005544 phthalimido group Chemical group 0.000 description 7
- 239000007858 starting material Substances 0.000 description 7
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 6
- WMFOQBRAJBCJND-UHFFFAOYSA-M Lithium hydroxide Chemical compound [Li+].[OH-] WMFOQBRAJBCJND-UHFFFAOYSA-M 0.000 description 6
- BAVYZALUXZFZLV-UHFFFAOYSA-N Methylamine Chemical compound NC BAVYZALUXZFZLV-UHFFFAOYSA-N 0.000 description 6
- YNAVUWVOSKDBBP-UHFFFAOYSA-N Morpholine Chemical compound C1COCCN1 YNAVUWVOSKDBBP-UHFFFAOYSA-N 0.000 description 6
- MZRVEZGGRBJDDB-UHFFFAOYSA-N N-Butyllithium Chemical compound [Li]CCCC MZRVEZGGRBJDDB-UHFFFAOYSA-N 0.000 description 6
- 239000007832 Na2SO4 Substances 0.000 description 6
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 6
- 150000001450 anions Chemical class 0.000 description 6
- FJDQFPXHSGXQBY-UHFFFAOYSA-L caesium carbonate Chemical compound [Cs+].[Cs+].[O-]C([O-])=O FJDQFPXHSGXQBY-UHFFFAOYSA-L 0.000 description 6
- 229910000024 caesium carbonate Inorganic materials 0.000 description 6
- 150000001721 carbon Chemical group 0.000 description 6
- 239000011203 carbon fibre reinforced carbon Substances 0.000 description 6
- 150000004795 grignard reagents Chemical class 0.000 description 6
- RCCPEORTSYDPMB-UHFFFAOYSA-N hydroxy benzenecarboximidothioate Chemical compound OSC(=N)C1=CC=CC=C1 RCCPEORTSYDPMB-UHFFFAOYSA-N 0.000 description 6
- YNESATAKKCNGOF-UHFFFAOYSA-N lithium bis(trimethylsilyl)amide Chemical compound [Li+].C[Si](C)(C)[N-][Si](C)(C)C YNESATAKKCNGOF-UHFFFAOYSA-N 0.000 description 6
- 229910052698 phosphorus Inorganic materials 0.000 description 6
- PYOKUURKVVELLB-UHFFFAOYSA-N trimethyl orthoformate Chemical compound COC(OC)OC PYOKUURKVVELLB-UHFFFAOYSA-N 0.000 description 6
- RIOQSEWOXXDEQQ-UHFFFAOYSA-N triphenylphosphine Chemical compound C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 RIOQSEWOXXDEQQ-UHFFFAOYSA-N 0.000 description 6
- BDNKZNFMNDZQMI-UHFFFAOYSA-N 1,3-diisopropylcarbodiimide Chemical compound CC(C)N=C=NC(C)C BDNKZNFMNDZQMI-UHFFFAOYSA-N 0.000 description 5
- GNPISAHACGIXLZ-UHFFFAOYSA-N 3-(4-methylphenoxy)propanoic acid Chemical compound CC1=CC=C(OCCC(O)=O)C=C1 GNPISAHACGIXLZ-UHFFFAOYSA-N 0.000 description 5
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 5
- WVDDGKGOMKODPV-UHFFFAOYSA-N Benzyl alcohol Chemical compound OCC1=CC=CC=C1 WVDDGKGOMKODPV-UHFFFAOYSA-N 0.000 description 5
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 5
- 239000004743 Polypropylene Substances 0.000 description 5
- 150000001408 amides Chemical class 0.000 description 5
- 238000007664 blowing Methods 0.000 description 5
- BGRWYRAHAFMIBJ-UHFFFAOYSA-N diisopropylcarbodiimide Natural products CC(C)NC(=O)NC(C)C BGRWYRAHAFMIBJ-UHFFFAOYSA-N 0.000 description 5
- 238000010438 heat treatment Methods 0.000 description 5
- 125000002768 hydroxyalkyl group Chemical group 0.000 description 5
- 125000000325 methylidene group Chemical group [H]C([H])=* 0.000 description 5
- 229920001155 polypropylene Polymers 0.000 description 5
- CHKVPAROMQMJNQ-UHFFFAOYSA-M potassium bisulfate Chemical compound [K+].OS([O-])(=O)=O CHKVPAROMQMJNQ-UHFFFAOYSA-M 0.000 description 5
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 5
- 239000000741 silica gel Substances 0.000 description 5
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- IVRIRQXJSNCSPQ-UHFFFAOYSA-N propan-2-yl carbonochloridate Chemical compound CC(C)OC(Cl)=O IVRIRQXJSNCSPQ-UHFFFAOYSA-N 0.000 description 1
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- 230000004044 response Effects 0.000 description 1
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- 229910000104 sodium hydride Inorganic materials 0.000 description 1
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- 238000005556 structure-activity relationship Methods 0.000 description 1
- 125000005346 substituted cycloalkyl group Chemical group 0.000 description 1
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- YNJBWRMUSHSURL-UHFFFAOYSA-N trichloroacetic acid Chemical compound OC(=O)C(Cl)(Cl)Cl YNJBWRMUSHSURL-UHFFFAOYSA-N 0.000 description 1
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- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
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- 229960004295 valine Drugs 0.000 description 1
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- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
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Classifications
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- C07D—HETEROCYCLIC COMPOUNDS
- C07D307/00—Heterocyclic compounds containing five-membered rings having one oxygen atom as the only ring hetero atom
- C07D307/02—Heterocyclic compounds containing five-membered rings having one oxygen atom as the only ring hetero atom not condensed with other rings
- C07D307/26—Heterocyclic compounds containing five-membered rings having one oxygen atom as the only ring hetero atom not condensed with other rings having one double bond between ring members or between a ring member and a non-ring member
- C07D307/30—Heterocyclic compounds containing five-membered rings having one oxygen atom as the only ring hetero atom not condensed with other rings having one double bond between ring members or between a ring member and a non-ring member with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D307/32—Oxygen atoms
- C07D307/33—Oxygen atoms in position 2, the oxygen atom being in its keto or unsubstituted enol form
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- C07C209/30—Preparation of compounds containing amino groups bound to a carbon skeleton by reduction of nitrogen-to-oxygen or nitrogen-to-nitrogen bonds
- C07C209/40—Preparation of compounds containing amino groups bound to a carbon skeleton by reduction of nitrogen-to-oxygen or nitrogen-to-nitrogen bonds by reduction of hydroxylamino or oxyimino groups
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- C07C259/04—Compounds containing carboxyl groups, an oxygen atom of a carboxyl group being replaced by a nitrogen atom, this nitrogen atom being further bound to an oxygen atom and not being part of nitro or nitroso groups without replacement of the other oxygen atom of the carboxyl group, e.g. hydroxamic acids
- C07C259/06—Compounds containing carboxyl groups, an oxygen atom of a carboxyl group being replaced by a nitrogen atom, this nitrogen atom being further bound to an oxygen atom and not being part of nitro or nitroso groups without replacement of the other oxygen atom of the carboxyl group, e.g. hydroxamic acids having carbon atoms of hydroxamic groups bound to hydrogen atoms or to acyclic carbon atoms
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- C07C259/08—Compounds containing carboxyl groups, an oxygen atom of a carboxyl group being replaced by a nitrogen atom, this nitrogen atom being further bound to an oxygen atom and not being part of nitro or nitroso groups without replacement of the other oxygen atom of the carboxyl group, e.g. hydroxamic acids having carbon atoms of hydroxamic groups bound to carbon atoms of rings other than six-membered aromatic rings
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- C07C259/04—Compounds containing carboxyl groups, an oxygen atom of a carboxyl group being replaced by a nitrogen atom, this nitrogen atom being further bound to an oxygen atom and not being part of nitro or nitroso groups without replacement of the other oxygen atom of the carboxyl group, e.g. hydroxamic acids
- C07C259/10—Compounds containing carboxyl groups, an oxygen atom of a carboxyl group being replaced by a nitrogen atom, this nitrogen atom being further bound to an oxygen atom and not being part of nitro or nitroso groups without replacement of the other oxygen atom of the carboxyl group, e.g. hydroxamic acids having carbon atoms of hydroxamic groups bound to carbon atoms of six-membered aromatic rings
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- C07D311/04—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring
- C07D311/58—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring other than with oxygen or sulphur atoms in position 2 or 4
- C07D311/68—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring other than with oxygen or sulphur atoms in position 2 or 4 with nitrogen atoms directly attached in position 4
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- C07D311/78—Ring systems having three or more relevant rings
- C07D311/80—Dibenzopyrans; Hydrogenated dibenzopyrans
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- C07D313/06—Seven-membered rings condensed with carbocyclic rings or ring systems
- C07D313/10—Seven-membered rings condensed with carbocyclic rings or ring systems condensed with two six-membered rings
- C07D313/12—[b,e]-condensed
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- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/18—Introducing halogen atoms or halogen-containing groups
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- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/30—Introducing nitrogen atoms or nitrogen-containing groups
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- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/34—Introducing sulfur atoms or sulfur-containing groups
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07B—GENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
- C07B2200/00—Indexing scheme relating to specific properties of organic compounds
- C07B2200/11—Compounds covalently bound to a solid support
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- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F2800/00—Copolymer characterised by the proportions of the comonomers expressed
- C08F2800/20—Copolymer characterised by the proportions of the comonomers expressed as weight or mass percentages
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- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F2810/00—Chemical modification of a polymer
- C08F2810/30—Chemical modification of a polymer leading to the formation or introduction of aliphatic or alicyclic unsaturated groups
Definitions
- This invention is directed to processes for the solid-phase synthesis of aldehyde, ketone, oxime, amine, and hydroxamic acid and ⁇ , ⁇ -unsaturated carboxylic acid and aldehyde compounds and to polymeric hydroxylamine resin compounds useful therefor.
- Solid-phase synthetic techniques in which a reagent is immobilized on a polymeric material which is inert to the reagents and reaction conditions employed, as well as being insoluble in the media used, are important synthetic tools for preparing amides, peptides and hydroxamic acids.
- Solid phase peptide synthesis a summary of the many techniques may be found in J. M. Stewart and J. D. Young, Solid Phase Peptide Synthesis, 2nd. Ed., Pierce Chemical Co. (Chicago, Ill., 1984); J. Meienhofer, Hormonal Proteins and Peptides , vol. 2, p. 46, Academic Press (New York), 1973; and E. Atherton and R. C.
- a polymeric reagent has the advantage of ease of separation from low molecular weight reactants or products by filtration or selective precipitation.
- the polymeric reagent also can be used in excess to effect fast and quantitative reactions, such as in the case of acylations, or a large excess of reactants may be used to drive the equilibrium of the reaction towards product formation to provide essentially quantitative conversion to product, as in solid phase peptide synthesis.
- a further advantage of supported reagents and catalysts is the fact that they are recyclable and that they lend easily to automated processes. In addition, supported analogs of toxic and odorous reagents are safer to use.
- PCT application publication no. WO96/26223 discloses the synthesis of hydroxamic acid compounds using a solid phase hydroxylamine substrate.
- Prasad et al. disclose a O-methylhydroxylamine-polystyrene resin compound in J. Steroid Biochem., 18, 257-261 (1983).
- Resin-bound Weinreb-like amides are disclosed by Fehrentz et al., Tet. Lett., 1995, 36, 7871-7874 and Dinh et al., Tet. Lett., 1996, 37, 1161-1164.
- This invention is directed to a process for the preparation of a ketone compound of formula
- R c and R a are independently aliphatic or aromatic, this process comprising
- [0015] is a solid support, L is absent or a linking group and R b is aliphatic or aryl with an organometallic reagent of formula R c M wherein R c is an aliphatic or aryl anion and M is a metal cation; and
- this invention is directed to a process for the preparation of an aldehyde compound of formula R a CHO wherein R a is defined above, comprising
- L and R a and R b are defined above;
- this invention is directed to a process for the preparation of an N-alkylated polymeric hydroxamic acid resin compound of formula
- L and R a and R b are defined above, comprising
- this invention is directed to a process for the preparation of an N-alkylated polymeric hydroxamic acid resin compound of formula
- L and R a and R b are defined above, comprising
- P is an amine protecting group, with an alkylating agent of formula R b LG wherein LG is defined above, to form a polymeric N-protected N-alkylated hydroxylamine resin compound of formula
- this invention is directed to a process for preparing a hydroxamic acid compound of formula
- a 2 is a direct bond, alkylene, or NR 13 ;
- R 13 is hydrogen or alkyl
- R 9 is —L 1 -R 14 or —L 2 -R 15 ;
- L 1 is a direct bond or alkylene
- R 14 is hydrogen, aryl, carboxy, cyano, cycloalkyl, cycloalkenyl, cyclocarbamoyl, cycloimidylalkyl, heterocyclyl, heteroaryl, —NH-C( ⁇ O)-NH 2 , (N-carbamoyl)cyclic amine, —C ⁇ N-O-C( ⁇ O)-NH 2 , —C( ⁇ O)-NY 1 Y 2 , —NY 1 SO 2 aryl, —NHR 13 , —SR 13 or —OR 13 ;
- L 2 is alkenylene or alkynylene
- R 15 is hydrogen, aryl, carboxy, cyano, cycloalkyl, cycloalkenyl, heterocyclylalkyl or heteroaryl;
- R 10 and R 12 are independently hydrogen or alkyl; or R 10 and R 12 together form a bond, or R 10 and R 9 taken together with the carbon atom through which R 10 and R 9 are attached form spirocycloalkyl;
- R 11 is a group —L 3 -R 16 , or R 11 and R 9 taken together with the carbon atoms through which R 11 and R 9 are attached form cycloalkylene; or R 11 and R 12 taken together with the carbon atom through which R 11 and R 12 are attached form spirocycloalkyl;
- L 3 is a direct bond, alkylene, alkenylene or alkynylene
- R 16 is hydrogen, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryl, heteroaryl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl, fused heterocyclylheteroaryl, —NH-C( ⁇ O)-NH 2 , —C ⁇ N-O-C(
- Y 1 and Y 2 are independently selected from hydrogen, alkyl, aralkyl, and aryl, or Y 1 and Y 2 taken together with the nitrogen atom to which Y 1 and Y 2 are attached form azaheterocyclyl;
- Ar is selected from the group of formulae
- R 17 is alkyl, or, when Z 3 is a direct bond, then R 17 is selected from hydrogen, alkyl, alkenyl and alkynyl;
- R 18 is cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryl, heteroaryl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl or fused heterocyclylheteroaryl;
- R 19 is R 20 , —OR 20 , —SR 20 , —SOR 20 , —SO 2 R 20 , —SO 2 NR 20 R 21 , —NR 20 SO 2 R 21 , —NR 20 R 21 , —O(C ⁇ O)NR 20 R 21 , —NR 20 C( ⁇ O)R 21 , —N(OH)C( ⁇ O)R 20 , or —C( ⁇ O)N(OH)R 21 ,
- R 20 and R 21 are independently hydrogen, alkyl, alkenyl, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryl, heteroaryl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused
- a 3 is a direct bond, alkylene, alkenylene or alkynylene
- Z 1 and Z 3 are independently a direct bond, oxygen, sulfur or NH;
- Z 2 is a direct bond, oxygen or sulfur
- B, C, D, and E are independently CH or a heteroatom selected from O, S, N, NOR 22 and NR 22 , or three of B, C, D and E are independently CH or a heteroatom selected from O, S, N or NR 22 , and the other of B, C, D and E is a direct bond; and one of B, C, D and E that are in adjacent positions is other than O or S;
- R 22 is hydrogen, alkyl, aryl, lower aralkyl, heteroaryl or lower heteroaralkyl;
- Q 1 , Q 2 and Q 3 independently are CH, CX 1 or N;
- X 1 is halogen
- n 0, 1 or 2; or
- this process comprising treating a polymeric hydroxamic acid resin compound of formula
- this invention is directed to a process for the preparation of a polymeric oxime ether resin compound of formula
- R d and R e are independently H, aliphatic or aromatic, this process comprising reacting a polymeric hydroxylamine resin compound of formula
- this invention is directed to a process for the preparation of an ⁇ -amine compound of formula
- R d and R e are independently H, aliphatic or aryl, provided that R d and R e are not both H, comprising reductively cleaving a polymeric oxime ether resin compound of formula
- this invention is directed to a process for the preparation of a substituted ⁇ -amine compound of formula
- R d and R e are independently H, aliphatic or aromatic, provided that R d and R e are not both H, and R f is aliphatic or aromatic, comprising
- this invention is directed to a process for the preparation of a lactone compound of formula
- R g , R h and R i are independently aliphatic or aromatic and Ph is phenyl, comprising
- this invention is directed to a process for the preparation of an ⁇ , ⁇ -unsaturated polymeric hydroxamic acid ester resin compound of formula
- L and R g and R h and R i are as defined herein, comprising reacting a polymeric hydroxylamine resin compound of formula
- this invention is directed to a process for the preparation of an ⁇ -cyclic hydroxylamine compound of formula
- R j and R k are aliphatic or aromatic and Q is —O— or —CH 2 —, comprising
- this invention is directed to a process for the preparation of an ⁇ -cyclic amino compound of formula
- R j and R k are aliphatic or aromatic and Q is —O— or —CH 2 —, comprising reductively cleaving a polymeric ⁇ -cyclic hydroxylamine resin compound of formula
- this invention is directed to a process for the preparation of an ⁇ -cyclic hydroxylamine compound of formula
- R j , R k and R l are aliphatic or aromatic and Q is —O— or —CH 2 —, comprising
- this invention is directed to a process for the preparation of an ⁇ -cyclic amino compound of formula
- R j , R k and R l are aliphatic or aromatic and Q is —O— or —CH 2 —, comprising reductively cleaving a polymeric ⁇ -cyclic hydroxylamine resin compound of formula
- this invention is directed to an N-protected hydroxylamine resin compound of formula
- P is an amine protecting group, provided that P is other than 4-methoxybenzyl or 2,4-dimethoxybenzyl.
- this invention is directed to a polymeric fluorophenyl hydroxylamine resin compound of formula
- A, R 3 and R 4 are as defined herein, P 1 is an amine protecting group, and R 28 , R 29 , and R 30 are ring system substituents, or R 28 and R 29 taken together with the carbon atoms through which they are linked form a 6 membered aryl or a 5 to 6 membered heteroaryl.
- this invention is directed to a process for preparing an ⁇ , ⁇ -unsaturated alkenoate resin compound of formula
- R m is H or aliphatic
- R n is aliphatic or aromatic, comprising
- R 20 and R 20 are alkyl, with excess base
- this invention relates to the N-alkylated polymeric hydroxamic acid resin compound of formula
- [0125] is a solid support containing one or more fluorine atoms.
- this invention is directed to the use of the N-alkylated polymeric hydroxamic acid resin compound of formula
- [0128] is a solid support containing one or more fluorine atoms, for the solid-phase synthesis of aldehyde, ketone, oxime, amine, and hydroxamic acid and ⁇ , ⁇ -unsaturated carboxylic acid and aldehyde compounds, wherein the solid support containing one or more fluorine atoms facilitates monitoring and quantifying the solid-phase reactions by 19 F NMR.
- a detailed discussion of the method of quantifying solid-phase reactions by 19 F NMR, and the synthesis of fluorinated resins is described in PCT/US98/26512 filed Dec. 14, 1998, the contents of which are incorporated herein by reference.
- Solid support means a substrate which is inert to the reagents and reaction conditions described herein, as well as being substantially insoluble in the media used.
- Representative solid supports include inorganic substrates such as kieselguhr, silica gel, and controlled pore glass; organic polymers including polystyrene, including 1-2% copolystyrene divinyl benzene (gel form) and 20-40% copolystyrene divinyl benzene (macroporous form), polypropylene, polyethylene glycol, polyacrylamide, cellulose, and the like; and composite inorganic/polymeric compositions such as polyacrylamide supported within a matrix of kieselguhr particles. See J. M. Stewart and J. D. Young, Solid Phase Peptide Synthesis, 2nd. Ed., Pierce Chemnical Co. (Chicago, Ill., 1984). Solid support is designated generally as “
- solid support includes a solid support as described above which is affixed to a second inert support such as the pins described in Technical Manual, MultipinTM SPOC, Chiron Technologies (1995) and references therein which comprise a detachable polyethylene- or polypropylene-based head grafted with an amino functionalized methacrylate copolymer and an inert stem.
- solid support includes polymeric supports such as the polyethylene glycol supports described by Janda et al., Proc. Natl. Acad. Sci. USA, 92, 6419-6423 (1995) and S. Brenner, WO 95/16918, which are soluble in many solvents but can be precipitated by the addition of a precipitating solvent.
- solid support includes polymeric supports as described above, containing one or more fluorine atoms.
- Polymeric supports containing one or more fluorine atoms are prepared by polymerization using methods known in the art so as to incorporate one or more fluorine-containing monomers into the solid support.
- Representative suitable fluorine-containing monomers include 4-fluorostyrene, 4-trifluoromethylstyrene, 2-fluoro-4-vinylbenzyl chloride and the like.
- Polymeric supports containing one or more fluorine atoms are readily prepared, for example by copolymerizing mixtures of 4-fluorostyrene, styrene, 1,4-divinylbenzene and 4-vinylbenzyl chloride. A detailed discussion of the method of synthesizing fluorinated resins is described in PCT/US98/26512 filed Dec. 14, 1998, the contents of which are incorporated herein by reference.
- Solid supports containing one or more fluorine atoms may be designated as
- Polymeric hydroxylamine resin compound means a solid support as defined above which is chemically modified as is known in the art to incorporate a plurality of hydroxylamine (—ONH 2 ) or protected hydroxylamine (—ONHP) groups.
- the hydroxylamine or protected hydroxylamine groups are covalently bound directly to the solid support or attached to the solid support by covalent bonds through a linking group.
- the polymeric hydroxylamine resin compounds according to the process aspect of this invention are designated herein as
- [0138] is a solid support as defined herein, L is absent or a linking group and P is an amine protecting group.
- Linking group and “linker” mean a group through which the amino, aminomethyl or other functionality may be covalently linked to the solid support.
- the linking group is generally inert to the reagents and reaction conditions described herein.
- “Amine protecting group” means an easily removable group which is known in the art to protect an amino group against undesirable reaction during synthetic procedures and to be selectively removable.
- N-protecting groups is well known in the art for protecting nitrogen-containing groups against undesirable reactions during a synthetic procedure, and many such protecting groups are known.
- CF for example, T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991), the contents of which are hereby incorporated herein by reference.
- N-protecting groups are acyl, including formyl, acetyl, chloroacetyl, trichloroacetyl, o-nitrophenylacetyl, o-nitrophenoxyacetyl, trifluoroacetyl, acetoacetyl, 4-chlorobutyryl, isobutyryl, o-nitrocinnamoyl, picolinoyl, acylisothiocyanate, aminocaproyl, benzoyl and the like, and acyloxy, including methoxycarbonyl; 9-fluorenylmethoxycarbonyl; 2,2,2-trifluoroethoxycarbonyl; 2-trimethylsilylethxoycarbonyl; vinyloxycarbonyl; allyloxycarbonyl; t-butyloxycarbonyl (BOC); 1,1-dimethylpropynyloxycarbonyl; benzyloxycarbonyl (CBZ); p-nitrophenylsulf
- Carboxylic acid protecting group and “acid protecting group” mean an easily removable group which is known in the art to protect a carboxylic acid (—CO 2 H) group against undesirable reaction during synthetic procedures and to be selectively removable.
- carboxylic acid protecting groups is well known in the art, and many such protecting groups are known.
- CF for example, T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991), the contents of which are hereby incorporated herein by reference.
- carboxylic acid protecting groups include esters such as methoxymethyl, methylthiomethyl, tetrahydropyranyl, benzyloxymethyl, substituted and unsubstituted phenacyl, 2,2,2-trichloroethyl, tert-butyl, cinnamyl, substituted and unsubstituted benzyl, trimethylsilyl, allyl, and the like, and amides and hydrazides including N,N-dimethyl, 7-nitroindolyl, hydrazide, N-phenylhydrazide, and the like.
- Especially preferred carboxylic acid protecting groups are tert-butyl and benzyl.
- “Hydroxy protecting group” means an easily removable group which is known in the art to protect a hydroxy group against undesirable reaction during synthetic procedures and to be selectively removable.
- the use of hydroxy protecting groups is well known in the art, and many such protecting groups are known. See., for example, T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991).
- hydroxy protecting groups include ethers such as methyl; substituted methyl ethers such as methoxymethyl (MOM), methylthiomethyl (MTM), 2-methoxyethoxymethyl (MEM), bis(2-chloroethoxy)methyl, tetrahydropyranyl (THP), tetrahydrothiopyranyl, 4-methoxytetrahydropyranyl, 4-methoxytetrahydrothiopyranyl, tetrahydrofuranyl, tetrahydrothiofuranyl, and the like; substituted ethyl ethers such as 1-ethoxyethyl, 1-methyl-1-methoxyethyl, 2-(phenylselenyl)ethyl, t-butyl, allyl, benzyl, o-nitrobenzyl, triphenylmethyl, a-naphthyldiphenylmethyl, p-methoxyphenyldiphenylmethyl, 9
- amino acid means an amino acid selected from the group consisting of natural and unnatural amino acids as defined herein.
- Natural amino acid means an ⁇ -amino acid selected from the group consisting of alanine, valine, leucine, isoleucine, proline, phenylalanine, tryptophan, methionine, glycine, serine, threonine, cysteine, tyrosine, asparagine, glutamine, lysine, arginine, histidine, aspartic acid and glutamic acid.
- Unnatural amino acid means an amino acid for which there is no nucleic acid codon.
- unnatural amino acids include, for example, the D-isomers of the natural ⁇ -amino acids as indicated above; aminobutyric acid (Aib), 3-aminoisobutyric acid (bAib), norvaline (Nva), ⁇ -Ala, 2-aminoadipic acid (Aad), 3-aminoadipic acid (bAad), 2-aminobutyric acid (Abu), ⁇ -aminobutyric acid (Gaba), 6-aminocaproic acid (Acp), 2,4-diaminobutryic acid (Dbu), ⁇ -aminopimelic acid, trimethylsilyl-Ala (TMSA), allo-isoleucine (alle), norleucine (Nle), tert-Leu, citrulline (Cit), ornithine (Orn), 2,2′-diaminopimelic acid) (Dpm
- “Equivalent amino acid” means an amino acid which may be substituted for another amino acid in the peptides according to the invention without any appreciable loss of function. In making such changes, substitutions of like amino acids is made on the basis of relative similarity of side chain substituents, for example regarding size, charge, hydrophilicity, hydropathicity and hydrophobicity as described herein.
- “Peptide” and “polypeptide” mean a polymer in which the monomers are natural or unnatural amino acid residues joined together through amide bonds.
- the term “peptide backbone” means the series of amide bonds through which the amino acid residues are joined.
- amino acid residue means the individual amino acid units incorporated into the peptides or polypeptides.
- “Aliphatic” means a radical derived from a non aromatic C—H bond by removal of the hydrogen atom.
- the aliphatic radical may be further substituted by additional aliphatic or aromatic radicals as defined herein.
- Representative aliphatic groups include alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aralkenyl, aralkyloxyalkyl, aralkyloxycarbonylalkyl, aralkyl, aralkynyl, aralkyloxyalkenyl, heteroaralkenyl, heteroaralkyl, heteroaralkyloxyalkenyl, heteroaralkyloxyalkyl, heteroaralkynyl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused heteroary
- Aromatic means a radical derived from an aromatic C—H bond by removal of the hydrogen atom.
- Aromatic includes both aryl and heteroaryl rings as defined herein. The aryl or heteroaryl ring may be further substituted by additional aliphatic or aromatic radicals as defined herein.
- Representative aromatic groups include aryl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, heteroaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl, fused heterocyclylheteroaryl, and the like.
- “Acid bioisostere” means a group which has chemical and physical similarities producing broadly similar biological properties to a carboxylic group (see Lipinski, Annual Reports in Medicinal Chemistry, 1986,21,p283 “Bioisosterism In Drug Design”; Yun, Hwahak Sekye, 1993,33,p576-579 “Application Of Bioisosterism To New Drug Design”; Zhao, Huaxue Tongbao, 1995,p34-38 “Bioisosteric Replacement And Development Of Lead Compounds In Drug Design”; Graham, Theochem, 1995,343,p105-109 “Theoretical Studies Applied To Drug Design: ab initio Electronic Distributions In Bioisosteres”).
- Suitable acid bioisosteres include: —C( ⁇ O)-NH-OH, —C( ⁇ O)-CH 2 OH, —C( ⁇ O)-CH 2 SH, —C( ⁇ O)-NH-CN, sulpho, phosphono, alkylsulfonylcarbamoyl, tetrazolyl, arylsulfonylcarbamoyl, heteroarylsulfonylcarbamoyl, N-methoxycarbamoyl, 3-hydroxy-3-cyclobutene-1,2-dione, 3,5-dioxo-1,2,4-oxadiazolidinyl or heterocyclic phenols such as 3-hydroxyisoxazolyl and 3-hydoxy-1-methylpyrazolyl.
- acyl means an H—CO— or alkyl-CO— group wherein the alkyl group is as herein described.
- Preferred acyls contain a lower alkyl.
- Exemplary acyl groups include fornyl, acetyl, propanoyl, 2-methylpropanoyl, butanoyl and palmitoyl.
- acylamino is an acyl-NH— group wherein acyl is as defined herein.
- Alkenoyl means an alkenyl-CO— group wherein alkenyl is as defined herein.
- alkenyl means a straight or branched aliphatic hydrocarbon group of 2 to about 15 carbon atoms which contains at least one carbon-carbon double bond. Preferred alkenyl groups have 2 to about 12 carbon atoms; more preferred alkenyl groups have 2 to about 4 carbon atoms.
- the alkenyl group is optionally substituted with one or more alkyl group substituents as defined herein. Representative alkenyl groups include ethenyl, propenyl, n-butenyl, i-butenyl, 3-methylbut-2-enyl, n-pentenyl, heptenyl, octenyl, cyclohexylbutenyl and decenyl.
- alkenyloxy means an alkenyl-O— group wherein the alkenyl group is as herein described.
- Representative alkenyloxy groups include allyloxy or 3-butenyloxy.
- Alkoxy means an alkyl-O— group wherein the alkyl group is as defined herein.
- Representative alkoxy groups include methoxy, ethoxy, n-propoxy, i-propoxy, n-butoxy, heptoxy, and the like.
- Alkoxyalkyl means an alkyl-O-alkylene- group wherein alkyl and alkylene are as defined herein.
- Representative alkoxyalkyl groups include methoxyethyl, ethoxymethyl, n-butoxymethyl and cyclopentylmethyloxyethyl.
- Alkoxyalkoxy means an alkyl-O-alkylenyl-O— group.
- Representative alkoxyalkoxy include methoxymethoxy, methoxyethoxy, ethoxyethoxy, and the like.
- Alkoxycarbonyl means an ester group; i.e. an alkyl-O-CO— group wherein alkyl is as defined herein.
- Representative alkoxycarbonyl groups include methoxycarbonyl, ethoxycarbonyl, t-butyloxycarbonyl, and the like.
- Alkoxycarbonylalkyl means an alkyl-O-CO-alkylene— group wherein alkyl and alkylene are as defined herein.
- Representative alkoxycarbonylalkyl include methoxycarbonylmethyl, and ethoxycarbonylmethyl, methoxycarbonyl ethyl, and the like.
- Alkyl means an aliphatic hydrocarbon group, which may be straight or branched-chain, having about 1 to about 20 carbon atoms in the chain. Preferred alkyl groups have 1 to about 12 carbon atoms in the chain. Branched means that one or more lower alkyl groups such as methyl, ethyl or propyl are attached to a linear alkyl chain. “Lower alkyl” means 1 to about 4 carbon atoms in the chain, which may be straight or branched.
- alkyl is optionally substituted with one or more “alkyl group substituents” which may be the same or different, and include halo, cycloalkyl, hydroxy, alkoxy, amino, carbamoyl, acylamino, aroylamino, carboxy, alkoxycarbonyl, aralkyloxycarbonyl, or heteroaralkyloxycarbonyl.
- alkyl group substituents include halo, cycloalkyl, hydroxy, alkoxy, amino, carbamoyl, acylamino, aroylamino, carboxy, alkoxycarbonyl, aralkyloxycarbonyl, or heteroaralkyloxycarbonyl.
- Representative alkyl groups include methyl, trifluoromethyl, cyclopropylmethyl, cyclopentylmethyl, ethyl, n-propyl, i-propyl, n-butyl, t-butyl, n-pentyl, 3-pentyl, methoxyethyl, carboxymethyl, methoxycarbonylethyl, benzyloxycarbonylmethyl, and pyridylmethyloxycarbonylmethyl.
- Alkylene means a straight or branched bivalent hydrocarbon chain of 1 to about 6 carbon atoms.
- the alkylene is optionally substituted with one or more “alkylene group substituents” which may be the same or different, and include halo, cycloalkyl, hydroxy, alkoxy, carbamoyl, carboxy, cyano, aryl, heteroaryl or oxo.
- the alkylene is optionally interrupted by, i.e., a carbon thereof is substituted by, —O—, —S(O) m (where m is 0-2), phenylene or —NR′— (where R′ is lower alkyl).
- Preferred alkylene groups are the lower alkylene groups having 1 to about 4 carbon atoms. Representative alkylene groups include methylene, ethylene, and the like.
- Alkenylene means a straight or branched bivalent hydrocarbon chain containing at least one carbon-carbon double bond.
- the alkenylene is optionally substituted with one or more “alkylene group substituents” as defined herein.
- the alkenylene is optionally interrupted by, i.e., a carbon thereof is substituted by, —O—, —S(O) m (where m is 0-2), phenylene or —NR′— (where R′ is lower alkyl).
- Representative alkenylene include —CH ⁇ CH—, —CH 2 CH ⁇ CH—, —C(CH 3 ) ⁇ CH—, —CH 2 CH ⁇ CHCH 2 —, and the like.
- Alkynylene means a straight or branched bivalent hydrocarbon chain containing at least one carbon-carbon triple bond.
- the alkynylene is optionally substituted with one or more “alkylene group substituents” as defined herein.
- the alkynylene is optionally interrupted by, i.e., a carbon thereof is substituted for, —O—, —S(O) m (where m is 0-2), phenylene or —NR′— (where R′ is lower alkyl).
- Representative alkynylene include
- Alkylsulfinyl means an alkyl-SO— group wherein the alkyl group is as defined above.
- Preferred alkylsulfinyl groups are those wherein the alkyl group is lower alkyl.
- Alkylsulfonyl means an alkyl-SO 2 -group wherein the alkyl group is as defined herein.
- Preferred alkylsulfonyl groups are those wherein the alkyl group is lower alkyl.
- Alkylsulfonylcarbamoyl means an alkyl-SO 2 -NH-CO— group wherein alkyl group is defined herein.
- Preferred alkylsulfonylcarbamoyl groups are those wherein the alkyl group is lower alkyl.
- Alkylthio means an alkyl-S— group wherein the alkyl group is as defined herein. Preferred alkylthio groups are those wherein the alkyl group is lower alkyl. Representative alkylthio groups include methylthio, ethylthio, i-propylthio, heptylthio, and the like.
- Alkynyl means a straight or branched aliphatic hydrocarbon group of 2 to about 15 carbon atoms which contains at least one carbon-carbon triple bond. Preferred alkynyl groups have 2 to about 12 carbon atoms. More preferred alkynyl groups contain 2 to about 4 carbon atoms. “Lower alkynyl” means alkynyl of 2 to about 4 carbon atoms. The alkynyl group may be substituted by one or more alkyl group substituents as defined herein.
- alkynyl groups include ethynyl, propynyl, n-butynyl, 2-butynyl, 3-methylbutynyl, n-pentynyl, heptynyl, octynyl, decynyl, and the like.
- Alkynyloxy means an alkynyl-O— group wherein the alkynyl group is as defined herein.
- Representative alkynyloxy groups include propynyloxy, 3-butynyloxy, and the like.
- Alkynyloxyalkyl means alkynyl-O-alkylene— group wherein alkynyl and alkylene are as defined herein.
- R 25 is hydrogen; R 27 O 2 C— wherein R 27 is hydrogen, alkyl, aralkyl or heteroaralkyl; R 27 O—; R 27 C(O)—; cyano; alkyl; nitro; or amino, and R 26 is selected from hydrogen; alkyl; aralkyl; and heteroaralkyl.
- Amino means a group of formula Y 1 Y 2 N— wherein Y and Y are independently hydrogen; acyl; or alkyl, or Y 1 and Y 2 taken together with the N through which Y 1 and Y 2 are linked form a 4 to 7 membered azaheterocyclyl.
- Representative amino groups include amino (H 2 N—), methylamino, dimethylanino, diethylamino, and the like.
- aminoalkyl means an amino-alkylene- group wherein amino and alkylene are defined herein.
- Representative aminoalkyl groups include aminomethyl, aminoethyl, dimethylaminomethyl, and the like.
- alkenyl means an aryl-alkenylene- group wherein aryl and alkenylene are as defined herein. Preferred aralkenyls contain a lower alkenylene moiety. A representative aralkenyl group is 2-phenethenyl.
- Aralkyloxy means an aralkyl-O- group wherein aralkyl is defined herein.
- Representative aralkyloxy groups include benzyloxy, naphth-1-ylmethoxy, naphth-2-ylmethoxy, and the like.
- Alkyloxyalkyl means an aralkyl-O-alkylene- group wherein aralkyl and alkylene are as defined herein.
- a representative aralkyloxyalkyl group is benzyloxyethyl.
- Aralkyloxycarbonyl means an aralkyl-O-CO— group wherein aralkyl is as defined herein.
- a representative aralkoxycarbonyl group is benzyloxycarbonyl.
- Aralkyloxycarbonylalkyl means an aralkoxycarbonyl-alkylene- group wherein aralkyloxycarbonyl and alkylene are as defined herein.
- Representative aralkoxycarbonylalkyls include benzyloxycarbonylmethyl, and benzyloxycarbonylethyl.
- Aralkyl means an aryl-alkylene- group wherein aryl and alkylene are as defined herein. Preferred aralkyls contain a lower alkyl moiety. Representative aralkyl groups include benzyl, 2-phenethyl, naphthlenemethyl, and the like.
- Alkyloxyalkenyl means an aralkyl-O-alkenylene- group wherein aralkyl and alkenylene are as defined herein.
- a representative aralkyloxyalkenyl group is 3-benzyloxyallyl.
- Alkylsulfonyl means an aralkyl-SO 2 — group wherein aralkyl is as defined herein.
- Alkylsulfinyl means an aralkyl-SO— group wherein aralkyl is as defined herein.
- Aralkylthio means an aralkyl-S— group wherein aralkyl is as defined herein.
- a representative aralkylthio group is benzylthio.
- Aroyl means an aryl-CO— group wherein aryl is defined herein. Representative aroyl include benzoyl, naphth-1-oyl and naphth-2-oyl.
- Cycloalkyl means a non-aromatic mono- or multicyclic ring system of about 3 to about 10 carbon atoms, preferably of about 5 to about 10 carbon atoms. Preferred cycloalkyl rings contain about 5 to about 6 ring atoms.
- the cycloalkyl is optionally substituted with one or more “ring system substituents” which may be the same or different, and are as defined herein, or where R 18 is a substituted cycloalkyl, the cycloalkyl is substituted by one or more (e.g.
- R 22 is as defined herein;
- R 23 is hydrogen, alkyl, cycloalkyl, aryl, arylalkyl, heteroaryl or heteroarylalkyl; and
- R 24 is alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, aryl, arylalkyl, heteroaryl or heteroarylalkyl.
- Representative monocyclic cycloalkyl include cyclopentyl, cyclohexyl, cycloheptyl, and the like.
- Representative multicyclic cycloalkyl include 1-decalin, norbornyl, adamantyl, and the like. The prefix spiro before cycloalkyl means that geminal substituents on a carbon atom are replaced to form 1,1-cycloalkyl.
- “Cycloalkylene” means a bivalent cycloalkyl having about 4 to about 8 carbon atoms.
- Preferred cycloalkylenyl groups include 1,2-, 1,3-, or 1,4- cis or trans-cyclohexylene.
- Cycloalkenyl means a non-aromatic mono- or multicyclic ring system of about 3 to about 10 carbon atoms, preferably of about 5 to about 10 carbon atoms which contains at least one carbon-carbon double bond. Preferred cycloalkylene rings contain about 5 to about 6 ring atoms.
- the cycloalkenyl is optionally substituted with one or more “ring system substituents” which may be the same or different, and are as defined herein.
- Representative monocyclic cycloalkenyl include cyclopentenyl, cyclohexenyl, cycloheptenyl, and the like.
- a representative multicyclic cycloalkenyl is norbornylenyl.
- Cyclocarbamoylalkyl means a compound of formula
- the cyclocarbamoyl group consists of the oxooxazaheterocyclyl ring moiety
- the alkylene group is as defined herein.
- the alkylene moiety may be attached to the carbamoyl through either a carbon atom or the nitrogen atom of the carbamoyl moiety.
- An exemplary cyclocarbamoylalkyl group is N-oxazolidinylpropyl.
- Cycloimidylalkyl means a compound of formula
- the imide group consists of the oxodiazaheterocyclyl ring moiety, and alkylene is as defined herein.
- the alkylene moiety may be attached to the carbamoyl through either a carbon atom or nitrogen atom of the carbamoyl moiety.
- An exemplary cycloimidylalkyl group is N-phthalimidepropyl.
- Heterocyclenyl means a non-aromatic monocyclic or multicyclic ring system of about 3 to about 10 ring atoms, preferably about 5 to about 10 ring atoms, in which one or more of the atoms in the ring system is/are element(s) other than carbon, for example nitrogen, oxygen or sulfur atoms, and which contains at least one carbon-carbon double bond or carbon-nitrogen double bond.
- Preferred heterocyclenyl rings contain about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before heterocyclenyl means that at least a nitrogen, oxygen or sulfur atom, respectively, is present as a ring atom.
- the heterocyclenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- ring system substituent is as defined herein.
- the nitrogen or sulphur atom of the heterocyclenyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide.
- Representative monocyclic azaheterocyclenyl groups include 1,2,3,4- tetrahydropyridine, 1,2-dihydropyridyl, 1,4-dihydropyridyl, 1,2,3,6-tetrahydropyridine, 1,4,5,6-tetrahydropyrimidine, 2-pyrrolinyl, 3-pyrrolinyl, 2-imidazolinyl, 2-pyrazolinyl, and the like.
- Representative oxaheterocyclenyl groups include 3,4-dihydro-2H-pyran, dihydrofuranyl, fluorodihydrofuranyl, and the like.
- a representative multicyclic oxaheterocyclenyl group is 7-oxabicyclo[2.2.1]heptenyl.
- Representative monocyclic thiaheterocyclenyl rings include dihydrothiophenyl, dihydrothiopyranyl, and the like
- Heterocyclyl means a non-aromatic saturated monocyclic or multicyclic ring system of about 3 to about 10 ring atoms, preferably about 5 to about 10 ring atoms, in which one or more of the atoms in the ring system is/are element(s) other than carbon, for example nitrogen, oxygen or sulfur.
- Preferred heterocyclyls contain about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before heterocyclyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom.
- heterocyclyl is optionally substituted by one or more “ring system substituents” which may be the same or different, and are as defined herein, or wherein R 18 is a substituted heterocyclyl, the heterocyclyl is substituted the ring carbon atoms by one or more (e.g.
- the nitrogen or sulphur atom of the heterocyclyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide.
- Representative monocyclic heterocyclyl rings include piperidyl, pyrrolidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiazolidinyl, 1,3-dioxolanyl, 1,4-dioxanyl, tetrahydrofuranyl, tetrahydrothiophenyl, tetrahydrothiopyranyl, and the like.
- Aryl means an aromatic monocyclic or multicyclic ring system of 6 to about 14 carbon atoms, preferably of 6 to about 10 carbon atoms.
- the aryl is optionally substituted with one or more “ring system substituents” which may be the same or different, and are as defined herein.
- Representative aryl groups include phenyl and naphthyl.
- Heteroaryl means an aromatic monocyclic or multicyclic ring system of about 5 to about 14 ring atoms, preferably about 5 to about 10 ring atoms, in which one or more of the atoms in the ring system is/are element(s) other than carbon, for example nitrogen, oxygen or sulfur. Preferred heteroaryls contain about 5 to about 6 ring atoms.
- the “heteroaryl” is optionally substituted by one or more “ring system substituents” which may be the same or different, and are as defined herein.
- the prefix aza, oxa or thia before heteroaryl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom.
- a nitrogen atom of a heteroaryl is optionally oxidized to the corresponding N-oxide.
- Representative heteroaryls include pyrazinyl, furanyl, thienyl, pyridyl, pyrimidinyl, isoxazolyl, isothiazolyl, oxazolyl, thiazolyl, pyrazolyl, furazanyl, pyrrolyl, pyrazolyl, triazolyl, 1,2,4-thiadiazolyl, pyrazinyl, pyridazinyl, quinoxalinyl, phthalazinyl, imidazo[1,2-a]pyridine, imidazo[2,1-b]thiazolyl, benzofurazanyl, indolyl, azaindolyl, benzimidazolyl, benzothienyl, quinolinyl, imidazolyl, thienopyridyl, quinazolinyl, thi
- fused arylcycloalkenyl means a radical derived from a fused aryl and cycloalkenyl as defined herein by removal of hydrogen atom from the cycloalkenyl portion.
- Preferred fused arylcycloalkenyls are those wherein aryl is phenyl and the cycloalkenyl consists of about 5 to about 6 ring atoms.
- the fused arylcycloalkenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- Representative fused arylcycloalkenyl include 1,2-dihydronaphthalene, indene, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- fused cycloalkenylaryl means a radical derived from a fused aryl and cycloalkenyl as defined herein by removal of hydrogen atom from the aryl portion.
- Representative fused cycloalkenylaryl are as described herein for a fused arylcycloalkenyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused arylcycloalkyl means a radical derived from a fused aryl and cycloalkyl as defined herein by removal of a hydrogen atom from the cycloalkyl portion.
- Preferred fused arylcycloalkyls are those wherein aryl is phenyl and the cycloalkyl consists of about 5 to about 6 ring atoms.
- the fused arylcycloalkyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- Representative fused arylcycloalkyl includes 1,2,3,4-tetrahydronaphthyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- fused cycloalkylaryl means a radical derived from a fused aryl and cycloalkyl as defined herein by removal of a hydrogen atom from the aryl portion.
- Representative fused cycloalkylaryl are as described herein for a fused arylcycloalkyl radical, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused arylheterocyclenyl means a radical derived from a fused aryl and heterocyclenyl as defined herein by removal of a hydrogen atom from the heterocyclenyl portion.
- Preferred fused arylheterocyclenyls are those wherein aryl is phenyl and the heterocyclenyl consists of about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before the heterocyclenyl portion of the fused arylheterocyclenyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom.
- the fused arylheterocyclenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- ring system substituent is as defined herein.
- the nitrogen or sulphur atom of the heterocyclenyl portion of the fused arylheterocyclenyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide.
- Representative fused arylheterocyclenyl include 3H-indolinyl, 1H-2-oxoquinolyl, 2H-1-oxoisoquinolyl, 1,2-dihydroquinolinyl, 3,4-dihydroquinolinyl, 1,2-dihydroisoquinolinyl, 3,4-dihydroisoquinolinyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- fused heterocyclenylaryl means a radical derived from a fused aryl and heterocyclenyl as defined herein by removal of a hydrogen atom from the aryl portion.
- Representative fused heterocyclenylaryl are as defined herein for a fused arylheterocyclenyl radical, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused arylheterocyclyl means a radical derived from a fused aryl and heterocyclyl as defined herein by removal of a hydrogen atom from the heterocyclyl portion.
- Preferred fused arylheterocyclyls are those wherein aryl is phenyl and the heterocyclyl consists of about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before heterocyclyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom.
- the fused arylheterocyclyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- the nitrogen or sulphur atom of the heterocyclyl portion of the fused arylheterocyclyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide.
- Representative preferred fused arylheterocyclyl ring systems include phthalimide, 1,4-benzodioxane, indolinyl, 1,2,3,4-tetrahydroisoquinoline, 1,2,3,4-tetrahydroquinoline, 1H-2,3-dihydroisoindolyl, 2,3-dihydrobenz[f]isoindolyl, 1,2,3,4-tetrahydrobenz[g]isoquinolinyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- fused heterocyclylaryl means a radical derived from a fused aryl and heterocyclyl as defined herein by removal of a hydrogen atom from the heterocyclyl portion.
- Representative preferred fused heterocyclylaryl ring systems are as described for fused arylheterocyclyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused heteroarylcycloalkenyl means a radical derived from a fused heteroaryl and cycloalkenyl as defined herein by removal of a hydrogen atom from the cycloalkenyl portion.
- Preferred fused heteroarylcycloalkenyls are those wherein the heteroaryl and the cycloalkenyl each contain about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before heteroaryl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom.
- the fused heteroarylcycloalkenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- the nitrogen atom of the heteroaryl portion of the fused heteroarylcycloalkenyl is optionally oxidized to the corresponding N-oxide.
- Representative fused heteroarylcycloalkenyl include 5,6-dihydroquinolyl, 5,6-dihydroisoquinolyl, 5,6-dihydroquinoxalinyl, 5,6-dihydroquinazolinyl, 4,5-dihydro-1H-benzimidazolyl, 4,5-dihydrobenzoxazolyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- fused cycloalkenylheteroaryl means a radical derived from a fused heteroaryl and cycloalkenyl as defined herein by removal of a hydrogen atom from the heteroaryl portion.
- Representative fused cycloalkenylheteroaryl are as described herein for fused heteroarylcycloalkenyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused heteroarylcycloalkyl means a radical derived from a fused heteroaryl and cycloalkyl as defined herein by removal of a hydrogen atom from the cycloalkyl portion.
- Preferred fused heteroarylcycloalkyls are those wherein the heteroaryl thereof consists of about 5 to about 6 ring atoms and the cycloalkyl consists of about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before heteroaryl means that at least a nitrogen, oxygen or sulfur atom is present respectively as a ring atom.
- the fused heteroarylcycloalkyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- ring system substituent is as defined herein.
- the nitrogen atom of the heteroaryl portion of the fused heteroarylcycloalkyl is optionally oxidized to the corresponding N-oxide.
- Representative fused heteroarylcycloalkyl include 5,6,7,8-tetrahydroquinolinyl, 5,6,7,8-tetrahydroisoquinolyl, 5,6,7,8-tetrahydroquinoxalinyl, 5,6,7,8-tetrahydroquinazolyl, 4,5,6,7-tetrahydro-1H-benzimidazolyl, 4,5,6,7-tetrahydrobenzoxazolyl, 1H4-oxa-1,5-diazanaphthalen-2-onyl, 1,3-dihydroimidizole-[4,5]-pyridin-2-onyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- fused cycloalkylheteroaryl means a radical derived from a fused heteroaryl and cycloalkyl as defined herein by removal of a hydrogen atom from the heteroaryl portion.
- Representative fused cycloalkylheteroaryl are as described herein for fused heteroarylcycloalkyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused heteroarylheterocyclenyl means a radical derived from a fused heteroaryl and heterocyclenyl as defined herein by the removal of a hydrogen atom from the heterocyclenyl portion.
- Preferred fused heteroarylheterocyclenyls are those wherein the heteroaryl thereof consists of about 5 to about 6 ring atoms and the heterocyclenyl consists of about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before heteroaryl or heterocyclenyl means that at least a nitrogen, oxygen or sulfur atom is present respectively as a ring atom.
- the fused heteroarylheterocyclenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- the nitrogen atom of the heteroaryl portion of the fused heteroarylheterocyclenyl is optionally oxidized to the corresponding N-oxide.
- the nitrogen or sulphur atom of the heterocyclenyl portion of the fused heteroarylheterocyclenyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide.
- Representative fused heteroarylheterocyclenyl include 7,8-dihydro[1,7]naphthyridinyl, 1,2-dihydro[2,7]naphthyridinyl, 6,7-dihydro-3H-imidazo[4,5-c]pyridyl, 1,2-dihydro- 1,5-naphthyridinyl, 1,2-dihydro-1,6-naphthyridinyl, 1,2-dihydro-1,7-naphthyridinyl, 1,2-dihydro- 1,8-naphthyridinyl, 1,2-dihydro-2,6-naphthyridinyl, and the like, in which the bond to the parent moiety is through a non aromatic carbon atom.
- fused heterocyclenylheteroaryl means a radical derived from a fused heteroaryl and heterocyclenyl as defined herein by the removal of a hydrogen atom from the heteroaryl portion.
- Representative fused heterocyclenylheteroaryl are as described herein for fused heteroarylheterocyclenyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- fused heteroarylheterocyclyl means a radical derived from a fused heteroaryl and heterocyclyl as defined herein, by removal of a hydrogen atom from the heterocyclyl portion.
- Preferred fused heteroarylheterocyclyls are those wherein the heteroaryl thereof consists of about 5 to about 6 ring atoms and the heterocyclyl consists of about 5 to about 6 ring atoms.
- the prefix aza, oxa or thia before the heteroaryl or heterocyclyl portion of the fused heteroarylheterocyclyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom.
- the fused heteroarylheterocyclyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein.
- the nitrogen atom of the heteroaryl portion of the fused heteroarylheterocyclyl is optionally oxidized to the corresponding N-oxide.
- the nitrogen or sulphur atom of the heterocyclyl portion of the fused heteroarylheterocyclyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide.
- fused heteroarylheterocyclyl include 2,3-dihydro-1H pyrrol[3,4-b]quinolin-2-yl, 1,2,3,4-tetrahydrobenz [b][1,7]naphthyridin-2-yl, 1,2,3,4-tetrahydrobenz [b][1,6]naphthyridin-2-yl, 1,2,3,4-tetrahydro-9H-pyrido[3,4-b]indol-2yl, 1,2,3,4-tetrahydro-9H-pyrido[4,3-b]indol-2yl, 2,3,-dihydro-1H-pyrrolo[3,4-b]indol-2-yl, 1H-2,3,4,5-tetrahydroazepino[3,4-b]indol-2-yl, 1H-2,3,4,5-tetrahydroazepino[4,3-b]indol-3-yl, 1H
- fused heterocyclylheteroaryl means a radical derived from a fused heteroaryl and heterocyclyl as defined herein, by removal of a hydrogen atom from the heteroaryl portion.
- Representative fused heterocyclylheteroaryl are as described herein for fused heteroarylheterocyclyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- Alkynyl means an aryl-alkynylene- group wherein aryl and alkynylene are defined herein.
- Representative aralkynyl groups include phenylacetylenyl and 3-phenylbut-2-ynyl.
- Aryldiazo means an aryl-N ⁇ N- group wherein aryl is defined herein.
- Representative aryldiazo groups include phenyldiazo and naphthyldiazo.
- Arylcarbamoyl means an aryl-NHCO- group, wherein aryl is defined herein.
- Benzyl means a phenyl-CH 2 - group.
- Substituted benzyl means a benzyl group in which the phenyl ring is substituted with one or more ring system substituents.
- Representative benzyl include 4-bromobenzyl, 4-methoxybenzyl, 2,4-dimethoxybenzyl, and the like.
- Carbamoyl means a group of formula Y 1 Y 2 NCO— wherein Y 1 and Y 2 are defined herein.
- Representative carbamoyl groups include carbamyl (H 2 NCO—), dimethylaminocarbamoyl (Me 2 NCO—), and the like.
- Carboxy and “carboxyl” mean a HO(O)C— group (i.e. a carboxylic acid).
- Carboxyalkyl means a HO(O)C-alkylene- group wherein alkylene is defined herein.
- Representative carboxyalkyls include carboxymethyl and carboxyethyl.
- Cycloalkyloxy means a cycloalkyl-O— group wherein cycloalkyl is as defined herein.
- Representative cycloalkyloxy groups include cyclopentyloxy, cyclohexyloxy, and the like.
- Diaazo means a bivalent —N ⁇ N— radical.
- Halo or “halogen” mean fluoro, chloro, bromo, or iodo.
- Heteroaralkenyl means a heteroaryl-alkenylene- group wherein heteroaryl and alkenylene are as defined herein. Preferred heteroaralkenyls contain a lower alkenylene moiety. Representative heteroaralkenyl groups include 4-pyridylvinyl, thienylethenyl, pyridylethenyl, imidazolylethenyl, pyrazinylethenyl, and the like.
- Heteroaralkyl means a heteroaryl-alkylene- group wherein heteroaryl and alkylene are as defined herein. Preferred heteroaralkyls contain a lower alkylene group. Representative heteroaralkyl groups include thienylmethyl, pyridylmethyl, imidazolylmethyl, pyrazinylmethyl, and the like.
- Heteroaralkyloxy means an heteroaralkyl-O— group wherein heteroaralkyl is as defined herein.
- a representative heteroaralkyloxy group is 4-pyridylmethyloxy.
- Heteroaralkyloxyalkenyl means a heteroaralkyl-O-alkenylene- group wherein heteroaralkyl and alkenylene are as defined herein.
- a representative heteroaralkyloxyalkenyl group is 4-pyridylmethyloxyallyl.
- Heteroaralkyloxyalkyl means a heteroaralkyl-O-alkylene- group wherein heteroaralkyl and alkylene are as defined herein.
- a representative heteroaralkyloxy group is 4-pyridylmethyloxyethyl.
- Heteroaralkynyl means an heteroaryl-alkynylene- group wherein heteroaryl and alkynylene are as defined herein. Preferred heteroaralkynyls contain a lower alkynylene moiety. Representative heteroaralkynyl groups include pyrid-3-ylacetylenyl, quinolin-3-ylacetylenyl, 4-pyridylethynyl, and the like.
- Heteroaroyl means an means a heteroaryl-CO— group wherein heteroaryl is as defined herein.
- Representative heteroaroyl groups include thiophenoyl, nicotinoyl, pyrrol-2-ylcarbonyl, pyridinoyl, and the like.
- Heteroaryldiazo means an heteroaryl-N ⁇ N— group wherein heteroaryl is as defined herein.
- Heteroarylsulphonylcarbamoyl means a heteroaryl-SO 2 -NH-CO— group wherein heteroaryl is as defined herein.
- Heterocyclylalkyl means a heterocyclyl-alkylene- group wherein heterocyclyl and alkylene are as defined herein. Preferred heterocyclylalkyls contain a lower alkylene moiety. A representative heteroaralkyl group is tetrahydropyranylmethyl.
- Heterocyclylalkyloxyalkyl means a heterocyclylalkyl-O-alkylene group wherein heterocyclylalkyl and alkylene are as defined herein.
- a representative heterocyclylalkyloxyalkyl group is tetrahydropyranylmethyloxymethyl.
- Heterocyclyloxy means a heterocyclyl-O— group wherein heterocyclyl is as defined herein.
- Representative heterocyclyloxy groups include quinuclidyloxy, pentamethylenesulfideoxy, tetrahydropyranyloxy, tetrahydrothiophenyloxy, pyrrolidinyloxy, tetrahydrofuranyloxy, 7-oxabicyclo[2.2.1]heptanyloxy, hydroxytetrahydropyranyloxy, hydroxy-7-oxabicyclo[2.2.1]heptanyloxy, and the like.
- “Hydroxyalkyl” means an alkyl group as defined herein substituted with one or more hydroxy groups. Preferred hydroxyalkyls contain lower alkyl. Representative hydroxyalkyl groups include hydroxymethyl and 2-hydroxyethyl.
- N-oxide means a
- Oxo means a group of formula >C ⁇ O (i.e., a carbonyl group).
- Phenoxy means a phenyl-O— group wherein the phenyl ring is optionally substituted with one or more ring system substituents as defined herein.
- Phenylene means a —phenyl— group wherein the phenyl ring is optionally substituted with one or more ring system substituents as defined herein.
- Phenylthio means a phenyl-S— group wherein the phenyl ring is optionally substituted with one or more ring system substituents as defined herein.
- “Pyridyloxy” means a pyridyl-O— group wherein the pyridyl ring is optionally substituted with one or more ring system substituents as defined herein.
- Ring system substituents mean substituents attached to aromatic or non-aromatic ring systems inclusive of hydrogen, alkyl, aryl, heteroaryl, aralkyl, aralkenyl, aralkynyl, heteroaralkyl, heteroaralkenyl, heteroaralkynyl, hydroxy, hydroxyalkyl, alkoxy, aryloxy, aralkoxy, acyl, aroyl, halo, nitro, cyano, carboxy, alkoxycarbonyl, aryloxycarbonyl, aralkoxycarbonyl, alkylsulfonyl, arylsulfonyl, heteroarylsulfonyl, alkylsulfinyl, arylsulfinyl, heteroarylsulfinyl, alkylthio, arylthio, nitrile, NO 2 , heteroarylthio, aralkylthio, heteroaralkylthio, hetero
- the “ring system substituent” When a ring system is saturated or partially saturated, the “ring system substituent” further comprises methylene (H2C ⁇ ), oxo (O ⁇ ) and thioxo (S ⁇ ).
- Preferred ring system substituents are hydrogen, CF 3 , fluoro, alkyl, alkoxy, nitrile or NO 2 .
- “Sulfamoyl” means a group of formula Y 1 Y 2 NSO 2 — wherein Y 1 and Y 2 are defined herein. Representative sulfamoyl groups are sulfamoyl (H 2 NSO 2 —) and dimethylsulfamoyl (Me 2 NSO 2 —).
- R a and R b independently represent any aliphatic or aromatic group amenable to the solvents and reagents utilized in the processes described herein.
- the groups R a and R b may be further substituted and may contain functional groups suitable for further chemical transformations while attached to the hydroxylamine resin. Such functional groups may be suitable protected to prevent interference with the reactions described below.
- R c represents any aliphatic or aromatic group suitable for use as an organometallic reagent.
- a polymeric hydroxylamine resin compound 1 is coupled with a carboxylic acid derivative of formula R a CO 2 H to form the polymeric hydroxamic acid resin compound 2.
- the coupling reaction is accomplished in the presence of an activating agent as is known in the art of peptide synthesis.
- activating agents include isopropyl chloroformate, diisopropylcarbodiimide (DIC), 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide (EDC), 1-hydroxybenzotriazole (HOBT), bis(2-oxo-3-oxazolidinyl)-phosphonic chloride (BOP-Cl), benzotriazole-1-yloxy-tris((dimethylamino)phosphonium)hexafluorophosphate (BOP), benzotriazole-1-yloxy-tris-pyrrolidino-phosphonium hexafluorophosphate (PyBROP), bromo-tris-pyrrolidino-phosphonium hexafluorophosphate (PyBOP), 2-(1H-benzotriazole-1-yl)-1.1.3.3-tetramethyluronium tetrafluoroborate (TBTU), 2-(1H-benzotriazole-1-
- Suitable solvents for the coupling reaction include dichloromethane, DMF, DMSO, THF, and the like. Coupling times range from about 2 to about 24 hours, depending upon the resin and carboxylic acid derivative to be coupled, activating agent, solvent and temperature. The coupling is accomplished at from about ⁇ 10° C. to about 50° C., preferably at about ambient temperature.
- the coupling reaction is preferably accomplished at ambient temperature in DMF using 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride over about 12 hours.
- the polymeric hydroxaric acid resin compound 2 is then alkylated with an alkylating agent of formula R b LG, where LG is a leaving group, in the presence of a non-nucleophilic base such as 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) in an inert organic solvent such as toluene to form the N-alkylated polymeric hydroxamic acid resin compound 3.
- the alkylating agent R b LG may be added in an equimolar amount to an excess of to about 25 molar equivalents. About 15 molar equivalents is preferred.
- the non-nucleophilic base may be added in an equimolar amount to an excess of to about 10 molar equivalents. About 5 molar equivalents is preferred.
- the leaving group LG is any group amenable to nucleophilic displacement by the nitrogen atom of the polymeric hydroxamic acid resin compound 2 under the reaction conditions described above. A preferred leaving group is halogen.
- a sample of the N-alkylated polymeric hydroxamic acid resin compound 3 may be subjected to acidolysis to cleave the substituted hydroxamic acid to confirm that the reaction proceeded satisfactorily.
- organometallic reagents are organolithium reagents of formula R c Li and Grignard reagents of formula R c MgX wherein X is halogen.
- the polymeric N-alkylated hydroxamic acid resin compound 3 is treated with R c MgX in diethyl ether at ambient temperature over about 18 hours, and the reaction mixture is then quenched by addition of aqueous HCl or aqueous KHSO 4 to liberate the ketone 4.
- Aldehydes are prepared by treatment of the polymeric N-alkylated hydroxamic acid resin compound 3 with a hydride reducing agent, followed by acid hydrolysis as shown in Scheme 1 above.
- Representative hydride reducing agents include LiAlH 4 , (iso-Bu) 2 AlH, LiAlH(O-t-Bu) 3 , LiAlH 4 -EtOH, LiAlH 4 -MeOH, and the like.
- Preferred reducing agents are LiAlH 4 and LiAlH 4 -MeOH.
- the acid hydrolysis is preferably accomplished aqueous KHSO 4 .
- the N-alkylated polymeric hydroxamic acid resin compound 3 is a Weinreb-like amide useful for the synthesis of aldehydes and ketones (S. Nahm and S. Weinreb, Tet Lett. 1981, 22, 3815-3818).
- This N-alkylated polymeric hydroxamic acid resin compound has advantages over the previous examples of resin bound Weinreb-like amides (See Fehrentz et al., Tet. Lett., 1995, 36, 7871-7874 and Dinh et al., Tet.
- N-alkylated with bulky lipophilic groups such as benzyl, substituted benzyl, naphthyl or any alkyl group necessary to optimize the reaction on the solid phase.
- the N-benzyl-O-methylpolystyrenyl moiety for example, is well suited to form a stable metal chelated intermediate.
- the lipophilic benzyl group is believed to help shield the chelate adding to its stability.
- the polymeric hydroxylamine resin compound is protected with an amine protecting group to form the N-protected polymeric hydroxylamine resin compound 6.
- the N-protected polymeric hydroxylamine resin compound 6 is then alkylated as described in Scheme 1 above to form the N-alkylated N-protected polymeric hydroxylamine resin compound 7.
- Removal of the amine protecting group provides the mono N-alkylated polymeric hydroxylamine resin compound 8.
- Coupling of 8 with a carboxylic acid compound of formula R a CO 2 H as described above provides the polymeric N-alkylated hydroxamic acid resin compound 3, which is converted to ketone 4 or aldehyde 5 as described in Scheme 1 above.
- Preferred amine protecting groups “P” include allyloxycarbonyl (Aloc), benzyloxycarbonyl (Cbz), p-methoxybenzyloxycarbonyl (Moz), p-nitrobenzyloxycarbonyl (4-NO 2 -Z), trimethylsilylethoxycarbonyl (Teoc), 2,4-dimethoxybenzyloxycarbonyl, o-nitrobenzyloxycarbonyl, o-nitrobenzylsulfonyl (o-Nbs), p-nitrobenzylsulfonyl (p-Nbs), and 2-nitro-4-trifluoromethylbenzenesulfonyl.
- the most preferred amine protecting group is allyloxycarbonyl.
- R a represents the residual, non-carboxyl portion of a natural or unnatural amino acid or peptide. Accordingly, the foregoing processes present a facile route to the heretofore difficult to obtain amino acid or peptide aldehyde compounds.
- the N-terminal nitrogen atom of the amino acid or peptide starting material is preferably protected with a suitable amine protecting group, designated herein as P′′.
- P′′ a suitable amine protecting group
- any functional groups contained in the amino acid or peptide side chain(s) may be suitably protected to prevent interference with the reactions described herein.
- R b is benzyl or substituted benzyl.
- R b is benzyl or benzyl substituted with halogen, haloalkyl or alkoxy and P′′ is t-butyloxycarbonyl (BOC).
- N-alkylated hydroxamic acid resin compound 3 in which R a is the residual non-carboxyl portion of a natural amino acid or peptide are amino acid or peptide aldehyde equivalents which may be stored and used to generate the corresponding amino acid or peptide aldehyde as needed by treatment with a hydride reducing agent and acid hydrolysis as described above.
- Preferred polymeric N-protected hydroxylamine resin compounds include N-allyloxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- the most preferred polymeric N-protected hydroxylamine resin compound is N-allyloxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin.
- R d and R e independently represent H or any aliphatic or aromatic group amenable to the solvents and reagents utilized in the processes described herein, provided that R d and R e are not both H.
- the groups R a , R b and R c may be further substituted and may contain functional groups suitable for further chemical transformations while attached to the hydroxylamine resin. It is understood that when these functional groups possess reactivity such that they could potentially interfere with the reactions described below, such functional groups should be suitably protected.
- R f represents any aliphatic or aromatic group which is amenable for use as an organometallic reagent.
- reaction of the polymeric hydroxylamine resin compound 1 with an aldehyde or ketone 9 provides the polymeric oxime ether resin compound 10.
- Oxime formation is preferably accomplished at about ambient temperature by swelling the polymeric hydroxylamine resin compound 1 in a suitable inert organic solvent such as dichloromethane, followed by addition of an excess of aldehyde or ketone.
- Reductive cleavage of the resin for example by reaction with NaCNBH 3 , or BH 3 THF, followed by LiAlH 4 provides the amine 11.
- Preferred metal cations are Li and MgX wherein X is halogen.
- a chiral auxiliary such as a chiral benzyl hydroxyl amine linker, chiral ⁇ -substituted amines will result.
- the polymeric hydroxylamine resin compound 1 is reacted with the acetophenone compound 18 and a bromoalkene compound or o-bromobenzyl compound to form the polymeric acetophenone oxime compounds 19 or 23.
- Radical cyclization of 19 or 23, for example by heating in the presence of AIBN and tri-n-butyltin hydride in an inert organic solvent such as benzene results in formation of the polymeric N-cyclyl hydroxylamine resin compounds 20 or 24.
- Treatment of 20 or 24 with acid, preferably trifluoroacetic acid results in formation of the cyclic hydroxamic acid compounds 21 or 25.
- the carboxylic acid compound 27 is coupled to the polymeric hydroxylamine resin compound 1 as described in Scheme 1 above to form the polymeric hydroxamic acid resin compound 28.
- the polymeric hydroxamic acid resin compound 28 is then treated with an acid such as trifluoroacetic acid (TFA) in an inert solvent such as dichloromethane to liberate the hydroxamic acid compound 29.
- TFA trifluoroacetic acid
- a higher percentage of TFA (trifluoroacetic acid) and longer reaction times are needed to cleave the hydroxamic acid from the Wang version compared to the Rink version of the resin.
- a process for the preparation of a polymeric ⁇ , ⁇ -unsaturated alkenoate resin compound 54 according to this invention is outlined in Scheme 7.
- R m is H or aliphatic
- R n is aliphatic or aromatic
- R 20 and R 21 are alkyl.
- R m and R n may contain additional functional groups. It is understood that these functional groups may be suitably protected to prevent interference with the reactions described below.
- coupling of the polymeric hydroxy resin 30 with the phosphono acetic acid compound 51 provides the polymeric phosphonoacetoxy resin compound 31.
- the coupling is preferably accomplished using a preformed symmetric anhydride (method i below), or using the 2,6-dichlorobenzoic acid anhydride described by Sieber, P., Tetrahedron Lett., 1987, 28, 6147-6150 (method ii below).
- the Horner-Emmons condensation of the polymeric phosphonoacetoxy resin compound 31 with the aldehyde R.CHO is then accomplished by treating 31 with an excess of a base such as potassium tert-butoxide, potassium bis(trimethylsilyl)amide or lithium bis(trimethylsilyl)amide in an organic solvent such as THF or toluene at about 0° C. to about 25° C.
- a base such as potassium tert-butoxide, potassium bis(trimethylsilyl)amide or lithium bis(trimethylsilyl)amide
- organic solvent such as THF or toluene
- the polymeric phosphonoacetoxy resin compound 31 is treated with an excess of a base such as potassium tert-butoxide or lithium bis(trimethylsilyl)amide in an organic solvent such as THF at about 0° C. to about 25° C.
- a base such as potassium tert-butoxide or lithium bis(trimethylsilyl)amide
- organic solvent such as THF
- the solvent and excess base are then removed from the reaction vessel and a solution of the aldehyde in a less polar solvent mixture, comprising the solvent used in the generation of the resin-bound anion and a second, less polar solvent, is added at ambient temperature and the mixture is stirred for up to three days to generate the polymeric alkeneoate resin compound 32.
- a solution of the aldehyde in a less polar solvent mixture comprising the solvent used in the generation of the resin-bound anion and a second, less polar solvent, is added at ambient temperature and the mixture is stirred for up to three days to generate the polymeric alkeneoate resin compound 32.
- Preferred less polar solvents are alkanes such as pentane, hexane or heptane, or cycloalkanes such as cyclohexane, cyclopentane or cycloheptane.
- An especially preferred less polar solvent mixture is 60% cyclohexane-THF.
- the polymeric alkeneoate resin compound 32 may be used for further transformations as described in Scheme 8, or the ⁇ , ⁇ -unsaturated acid compound 54 may be cleaved from the resin using methods commonly known in the art, for example by treating a mixture of the polymeric alkeneoate resin compound 53 in a suitable organic solvent such as dichloromethane, dichloroethane or dioxane, with acid. Cleavage is preferably accomplished at about ambient temperature using a trifluoroacetic acid (TFA)-dichloromethane solvent mixture over about 1 hour.
- TFA trifluoroacetic acid
- the polymeric diethylphosphonoacetoxy-resin compound 31 is treated with a base such as potassium bis (trimethylsilyl) amide in an inert solvent such as toluene, at a temperature of about 0° C., followed by an aldehyde of formula R 11 CHO wherein R 11 is as defined above, at about ambient temperature to give the polymeric alkenoate resin compound 32.
- a base such as potassium bis (trimethylsilyl) amide
- an inert solvent such as toluene
- reaction of the polymeric alkenoate resin compound 32a, prepared as described in Scheme 7, with a thiol of formula Ar-A 2 -SH, wherein Ar and A 2 are as defined above, provides the polymeric alkanoate resin compound 33.
- the addition may be conveniently carried out under mild basic conditions, for example in the presence of lithium hydroxide at about ambient temperature.
- the polymeric alkanoate resin compound 33 may then be hydrolytically cleaved by treatment with acid as described in Scheme 7, above, to prepare the carboxylic acid compound 27 wherein n is 0.
- an oxidizing agent such as m-chloro-perbenzoic acid in an inert solvent such as dioxane at about ambient temperature
- an oxidizing agent such as m-chloro-perbenzoic acid in an inert solvent such as dioxane
- a polymeric hydroxy resin compound 30 is converted to the polymeric N-hydroxylphthalimido resin compound 36 by coupling with N-hydroxyphthalimide under Mitsunobu conditions (Mitsunobu, O., Synthesis 1981, 1), by conversion of the hydroxy group to a leaving group such as the mesylate followed by nucleophilic displacement, or by reaction of the polymeric hydroxy resin compound with N-hydroxyphthalimide in the presence of an acid such as benzenesulfonic acid. Removal of the phthalimido group provides the polymeric hydroxylamine resin compound 1.
- N-hydroxyphthalimide is coupled to the resin in the presence of diisopropylazodicarboxylate and triphenylphosphine in DMF.
- the phthalimido protection is removed by methylaminolysis in THF at 40° C. The reaction is complete in about 2 hours.
- the use of the methylamine to cleave the phthalimide protection offers a significant advantage over the commonly used hydrazinolysis procedure (Wolf et al., Can. J. Chem., 1970, 48, 3572.
- a polymeric hydroxy resin compound 30 is coupled with a N,N-diprotected hydroxylamine compound 37, wherein P and P′ are amine protecting groups, as described in Scheme 8 above to form the polymeric N,N-diprotected hydroxylamine resin compound 38.
- the amine protecting group P′ is then selectively removed to form the polymeric N-protected hydroxylamine resin compound 6.
- P is benzyl and P′ is allyloxycarbonyl.
- Selective removal of the allyloxycarbonyl protecting group is effected by treatment with tetrakis(triphenylphosphine)Palladium(0).
- the N,N-diprotected hydroxylamine compound 37 is prepared by sequential introduction of the protecting groups P and P′ to an O-protected hydroxylamine compound of formula H 2 NOP 2 wherein P 2 is a hydroxy protecting group.
- a preferred hydroxy protecting group is alkyl.
- the amine protecting groups P and P′ are then introduced using reagents and reaction conditions well known in the art of organic synthesis.
- reaction of O-tert-butylhydroxylamine with allyloxychloroformate results in formation of N-allyloxycarbonyl-O-tert-butylhydroxylamine, which is then reacted with benzyl bromide to form N-benzyl-N-allyloxycarbonyl-O-tert-butylhydroxylamine.
- Treatment of N-benzyl-N-allyloxycarbonyl-O-tert-butylhydroxylamine with trifluoroacetic acid gives N-benzyl-N-allyloxycarbonylhydroxylamine.
- a polymeric chloromethyl resin compound such as chloromethyl polystyrene (39, Merrifield resin) is reacted with 4-hydroxy-2-fluoroacetophenone in the presence of base to form the 4-(1-hydroxylethyl)-2-fluorophenoxymethyl resin compound 40.
- Reduction of the ketone group for example using lithium borohydride in THF, provides the 4-(1-hydroxyethyl-2-fluorophenoxymethyl resin compound 41.
- a polymeric chloromethyl resin of compound such as chloromethyl polystyrene (39, Merrifield resin) is reacted with Methyl-2-fluoro-4-hydroxybenzoate in the presence of base to form the 4-(methylformate)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin, compound 40a.
- Reduction of the ester group for example with lithium aluminum hydride in THF, provided the 4-(hydroxymethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin, compound 41a.
- a polymeric chloromethyl resin compound such as chloromethyl polystyrene (39, Merrifield resin) is reacted with 4-hydroxy-2,3,5,6-tetrafluorobenzoic acid in the presence of base to form the 4-carboxy-2,3,5,6-tetrafluorophenoxymethyl resin compound 44.
- Reduction of the carboxylic acid group for example using LiAlH 4 , diisobutylaluminum hydride, or BH 3 -THF provides the 4-hydroxymethyl-2,3,5,6-tetrafluorophenoxymethyl resin compound 45.
- Preferred polymeric hydroxylamine resin compounds have formula 1 wherein L is a linking group.
- Preferred linking groups L have the formula
- A is absent or a group of formula —X 1 -Z— wherein
- X 1 is —CHR— or —CHR-Y-CO-(CH 2 ) n — wherein R is H, alkyl, phenyl, or phenyl substituted with —H, alkyl, alkoxy, halogen, nitrile or —NO 2 ,
- Y is —O— or —NH—
- n is an integer from 1 to 6
- Z is —O— or —NH—
- R 1 , R 1a , R 2 , and R 2a are independently ring system substituents
- R 3 and R 4 are independently —H, alkyl, phenyl, or phenyl substituted with one or more substituents selected from alkyl, alkoxy, halogen nitrile and —NO 2 ;
- R 1′ is —H, alkyl, alkoxy, halogen, nitrile or —NO 2 ;
- R 6 , R 7 and R 8 are independently selected from —H, alkyl, alkoxy, halogen, nitrile and —NO 2 .
- R 1 and R 2 are independently H or F;
- R 1a and R 2a are independently ring system substituents
- R 3 and R 4 are H and the other is H or 2,4-dimethoxyphenyl.
- Representative preferred polymeric hydroxylamine resin compounds include 4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin, designated herein
- O-hydroxylamine-2′-chlorotrityl-copolystyrene-1%-divinylbenzene-resin designated herein as
- the Rink handle (H. Rink, Tet. Lett., 28, 3787-3790, 1987) has the advantage of being cleaved under mild acidolysis for short periods of time (i.e. 10% TFA in DCM for 10-15 minutes.).
- it is desirable to synthesize the corresponding functional resin on the Wang solid support ((a) S. S. Wang, J. Am. Chem. Soc., 1973, 95, 1328. b) Lu et al., J. Org. Chem., 1981, 46, 3433).
- polymeric hydroxylamine resin compounds in which R 1a and R 1b are F are especially useful as it lends itself to ready quantification of resin loading and monitoring of reactions conducted on the resin using fluorine NMR.
- this method involves coupling the carboxyl group of a suitably N-protected first amino acid to the resin to form the polymeric N-protected amino acid hydroxamic acid resin compound.
- the amino acid N-protecting group is then removed and the unprotected polymeric amino acid hydroxamic acid resin compound is coupled with a second suitably N-protected amino acid. This process is then repeated until the desired amino acid residues have been incorporated in the peptide.
- peptides comprising multiple amino acids are prepared by coupling a suitably N-protected peptide subunit comprising two or more amino acids to form the polymeric N-protected peptide hydroxamic acid resin compound.
- the amino acid N-protecting group is then removed and the unprotected polymeric peptide hydroxamic acid resin compound is coupled with a second suitably N-protected amino acid or peptide.
- a polypeptide may be prepared by coupling of peptide subunits.
- the polymeric peptide hydroxamic acid compound is reacted with an organometallic reagent followed by acid hydrolysis to form the peptide ketone compound; reductively cleaved to form the peptide aldehyde compound; or cleaved with acid to form the peptide hydroxamic acid compound. Any remaining protecting groups may be removed prior to or subsequently to cleavage of the peptide from the resin.
- Hydroxamic acid derivatives produced in accordance with the process of this invention are useful, inter alia, as 5-LO (lipoxygenase) inhibitors.
- 5-LO lipoxygenase
- N-protecting groups suitable for use in peptide synthesis as described herein should have the properties of being stable to the conditions of coupling to the polymeric hydroxylamine resin compound while being readily removable without destruction of the growing peptide chain or racemization of any of the chiral centers contained therein.
- Suitable protecting groups are 9-fluorenylmethyloxycarbonyl (Fmoc), t-butyloxycarbonyl (Boc), benzyloxycarbonyl (Cbz), biphenylisopropyloxycarbonyl, t-amyloxycarbonyl, isobornyloxycarbonyl, (a,a)dimethyl-3,5-dimethoxybenzyloxycarbonyl, o-nitrophenylsulfenyl, 2-cyano-t-butyloxycarbonyl, and the like.
- the resins of this invention are useful for constructing arrays of aldehyde, ketone or amine combinatorial libraries or arrays of aldehydes and ketones as reagents in combinatorial library synthesis, for example, reagents for the Ugi 4-component condensation (Ivar Ugi, in Isonitrile Chemistry, 1971, p. 145, Academic Press).
- the hydroxylamine bound resins may be used not only for single functional group transformations, but also multiple step solid phase synthesis to generate combinatorial libraries.
- the functionalized resins of this invention also are useful for the parallel synthesis of a multiplicity of different aldehyde, ketone or amine end products as outlined for ketone compounds in Schemes 12a and 12b.
- R b and R c are as defined above; n is an integer which represents the total number of different aldehyde, ketone or amine products which are to be prepared; and R a1 -R an represent, independently, an aliphatic or aromatic group as defined herein.
- Each portion of polymeric N-alkylated hydroxamic acid resin compound is then reacted with a Grignard reagent of formula R c X and subjected to acid hydrolysis to give n portions of ketone derived from a single organometallic reagent.
- the resulting polymeric N-alkylated hydroxamic acid resin compound is then divided into n portions, and each portion of polymeric N-alkylated hydroxamic acid resin compound is then reacted with a different Grignard reagent R c1 -R cn MgBr and subjected to acid hydrolysis to give n different ketone compounds derived from a single carboxylic acid compound.
- the functionalized resins of this invention are also useful for constructing a combinatorial library of ketones or amines as illustrated for the ketone library derived from 4 carboxylic acid compounds and 4 Grignard reagents as outlined in Scheme 14.
- the polymeric N-alkylated hydroxylamine resin compound 8 is divided in 4-portions, and each portion is coupled with a different carboxylic acid compound to prepare 4 different polymeric N-alkylated hydroxamic acid resin compounds.
- the 4 portions of polymeric N-alkylated hydroxamic acid resin compounds are then mixed together to form a single portion which is then divided into 4 portions of polymeric N-alkylated hydroxamic acid resin compounds, in which each portion contains approximately equal amounts of each individual polymeric N-alkylated hydroxamic acid resin compound.
- Each of the 4 portions is then reacted with a different Grignard reagent R c1 -R c4 MgBr and subjected to acid hydrolysis to give 4 portions of ketone compound, each of which contains 4 compounds representing the products of reaction of each of the 4 different polymeric N-alkylated hydroxamic acid resin compounds with a single Grignard reagent.
- a combinatorial library containing a multiplicity of ketone compounds may be quickly constructed.
- a combinatorial library of peptides may be assembled by repeating the dividing-recombining sequence for each amino acid or peptide building block.
- Rink acid resin (1 g; 0.63 mmol) is swelled in DMF (10 mL) for 15 minutes at ambient temperature.
- N-Hydroxyphthalimide (514 mg; 3.15 mmol) is added to the resin suspension followed by benzene sulfonic acid (19 mg; 0.13 mmol).
- the mixture is stirred by means of a mechanical stirrer and heated to 50° C. for five hours.
- the mixture is then cooled to ambient temperature and stirred for an additional 12 hours, after which the resin is filtered and washed extensively with DMF (5 ⁇ 25 mL); DMF:H 2 O (70:30; 5 ⁇ 25 mL); THF (10 ⁇ 25 mL); and diethyl ether (10 ⁇ 25 mL).
- the reaction mixture is shaken at ambient temperature using a vortex shaker for 12 h, after which the resin is filtered and washed extensively with DMF:H 2 O (80:20; 5 ⁇ 5 mL), DMF (5 ⁇ 5 mL), THF (5 ⁇ 5 mL), and diethyl ether (5 ⁇ 5 mL).
- the resin is dried under high vacuum at 40° C. for 12 hours.
- the IR spectrum shows a carbonyl absorbance at 1675 cm ⁇ 1 corresponding to the bound hydroxamate.
- a 1-L jacketed reactor with a bottom valve and overhead stirrer (Ace catalog #8090) is charged with Wang resin (18.35 g, 20 meq) and anhydrous tetrahydrofuran (THF, 450 mL). This mixture is stirred gently for about 15 minutes, then as much solvent as possible is removed through a tube fitted with a porous glass frit via vacuum aspiration. Fresh TBIF is added, followed by triphenylphosphine (15.74 g, 60 mmol) and N-Hydroxyphthalimide (16.31 g, 100 mmol). The resulting mixture is stirred and cooled to ⁇ 5-0° C.
- Diisopropyl azodicarboxylate (11.8 mL, 60 mmol) is added slowly so as to maintain the temperature at ⁇ 5° C. When the addition is complete, the stirred mixture is allowed to warm slowly to room temperature and stirred overnight. As much of the reaction liquors as possible is removed by aspiration through the dip tube as above.
- the resin is washed by charging N,N-dimethylformamide (DMF, 200 mL), stirring the mixture for 3-5 minutes, and then removing by aspiration as much of the wash solution as possible. Similarly, the resin is washed sequentially with an additional portion of DMF and portions of methanol (twice), THF (twice), and methanol (once). A portion of the resin may be removed for analysis: IR 1734 cm ⁇ 1 (C ⁇ O).
- a 200 mg sample of the dried resin (ca. 0.2 mmol) is charged to a 5- or 10-mL resin reactor (a polypropylene syringe barrel fitted with a polypropylene frit).
- the resin is swelled for about 15 minutes in dry DMF, and then 115 mg 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (EDCI, 0.6 mmol) is added.
- EDCI 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride
- 4-nitrophenylacetic acid (115 mg, 0.6 mmol).
- the reactor is capped and the mixture is agitated slowly overnight (a rocker bed apparatus is used).
- reaction liquors are removed by vacuum filtration (the resin reactor is inserted through a small rubber vacuum flask adapter), and the resin is washed with several small (2-3 mL) portions of the following solvents: DMF (4-5 portions), MeOH or 50% aq. DMF (3-4 portions), THF (3-4 portions), and MeOH (2-3 portions).
- the resin (still in the syringe reactor) is dried for at least 4 hours under vacuum at 40 ° C.
- the combined filtrates are concentrated to about 2 mL at 30° C., 2 mL additional toluene is added, and the resulting solution is concentrated to dryness under vacuum (rotary evaporator followed by vacuum oven at 30° C.; note that heating in the presence of TFA promotes formation of the “anhydride” impurity).
- the residue is weighed and analyzed for weight % purity (HPLC, using the carboxylic acid as a response factor standard).
- N-4-phenylbut-1-oyl-4-O-methylhydroxylamine phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin.
- N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (1.46 g, 1.095 mmol), prepared as in Example 5, is suspended in toluene (26 mL) for 10 minutes.
- DBU (0.83 mL; 5.5 mmol) is added and the mixture is agitated for 2 hours on a wrist shaker.
- Bromobenzyl bromide (4.1 g, 16.425 mmol) is added and the reaction mixture is vigorously agitated for 4 days.
- N-4-bromobenzyl-N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.2 g, 0.6 mmol/g 0.12 mmol) is suspended in diethyl ether for 10 minutes and then cooled to 5° C. in an orbital shaker. The suspension is treated with LiAlH 3 OMe (0.46 M in diethyl ether, 0.22 mL, 0.1 mmol) and agitated for 30 minutes at this temperature. The reaction mixture is quenched by the addition of 2 M HCl (aq) and vortexed for 30 minutes.
- N-4-bromobenzyl-N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.15 g, approx. 0.75 mmol/g 0.11 mmol) is suspended in diethyl ether (1 mL) and treated with 1 M solution of ethyl magnesium bromide in tetrahydrofuran (0.34 mL, 0.34 mmol). The reaction mixture is agitated for 18 hours, and then quenched by the addition of 2 M HCl (aq) (approx. pH 3 is obtained). The mixture is agitated for 30 minutes.
- DBU (1.6 g, 10.5 mmol) is added and the mixture is agitated for 2 hours on a wrist shaker.
- Chlorobenzyl bromide (6.47 g, 31.5 mmol) is added and the reaction mixture is vigorously agitated for 3 days.
- reaction mixture is quenched by the addition of aqueous 2 M HCl and vortexed for 30 minutes.
- Sodium potassium tartrate is added and the mixture is vortexed for a further 10 minutes.
- Sodium sulfate is added and the mixture is filtered through a plug of silica gel, washing thoroughly with dichloromethane. The filtrate is concentrated to give 4-bromo-3-methyl benzaldehyde.
- N-4-chlorobenzyl-N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.23 g, 0.5 mmol/g 0.115 mmol), prepared as in Example 11, is suspended in diethyl ether (1 mL) and treated with ethyl magnesium bromide (1.0 M in THF, 0.23 mL, 0.23 mmol). The reaction mixture is agitated for 18 hours, and then quenched by the addition of aqueous 2 M HCl (approx. pH 3 is obtained). The mixture is agitated for 30 minutes.
- N-hydroxy-3-(4-methoxyphenyl)propionamide is prepared by reaction of N-3-(4-methoxphenyl)propan-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7.
- N-hydroxy-4-bromocinnamamide is prepared by treating N-4-bromocinnamoyl4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7.
- N-Hydroxy-4-chlorobenzamide is prepared by treating N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7.
- N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.1 g, 0.075 mmol, 0.75 mmol/g) is suspended in toluene (2 mL) and cooled to 5° C. The mixture is treated with methyl iodide (1.5 mmol, 0.21 g, 93 ⁇ l) followed by DBU (0.22 mL, 0.228 g, 1.5 mmol ). The reaction mixture is placed in a vortexer and allowed to warm to ambient temperature.
- N-methyl-N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is suspended in diethyl ether (0.7 mL) and treated with ethyl magnesium bromide (1.0 M in THF, 0.225 mL, 0.225 mmol).
- the reaction mixture is agitated for 18 hours on a wrist shaker and then quenched by the addition of 5% HCl in ethanol. Agitation is maintained for a further 30 minutes and the mixture is then filtered through a small plug of silica to remove the inorganic material.
- N-[3-((4-methoxyphenyl)sulfonyl)propan-1-oylcarbonyl]-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is prepared using the method of Example 16, except substituting 3-(4-methoxyphenylsulfonyl)propionic acid for 3-(4-methoxyphenyl)propionic acid.
- IR C ⁇ O 1691.6 cm ⁇ 1 (broad). Elemental Analysis: calcd: N, 1.02%; S, 2.34%. Found: N, 1.03%; S, 2.5%.
- N-hydroxy-3-(4-methoxyphenylsulfonyl)propionamide is prepared by treating N-[3-((4-methoxyphenyl)sulfonyl)propan-1-oylcarbonyl]-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7.
- N-allyoxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with 15 ml of dichloromethane, THF (3 ⁇ ) and dichloromethane (3 ⁇ ) and dried in vacuo.
- N-allyoxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin prepared in Example 27 is suspended in 15 mL of toluene.
- DBU 1,522 g, 1.5 ml, 10 mmol
- 4-bromobenzyl bromide 2.5 g,10 mmol
- N-4-bromobenzyl-N-alloxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with 15 mL of DMF (3 ⁇ ), THF (3 ⁇ ) and dichioromethane (3 ⁇ ) and dried in vacuo.
- N-4-bromobenzyl, N-allyoxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin prepared as in Example 28, is swelled in 6 mL of THF, 6 mL of DMSO, 3 mL of 0.5 n HCl. Pd(Ph 3 P) 4 (347 mg, 15 weight %) is added and the mixture is shaken for 5 minutes. Morpholine (4.3 mL) is added and the mixture is shaken overnight.
- the reagents are drained off and the N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with DMF (2 ⁇ ), THF (2 ⁇ ), dichloromethane (2 ⁇ ), 0.5% diisopropylethyl amine in dichloromethane (3 ⁇ ), 0.5% sodium diethyldithiocarbamate in DMF (3 ⁇ ), DMF (3 ⁇ ), THF (3 ⁇ ) and dichloromethane (3 ⁇ ) and dried in vacuo overnight.
- N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (1.17 g, 1 mmole), prepared as in Example 29, is suspended in 15 ml of DMF.
- Indole-2-carboxylic acid (483 mg, 3 mmol) and 575.1 mg (3 mmol) of 1(3-dimethylaminopropyl)-3-diethylcarbodiimide hydrochloride are added and the mixture is shaken for 16 hours.
- N-(indol-2-ylcarbonyl)-N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is drained and washed with 15 ml of DMF (3 ⁇ ), THF/20% H 2 O (3 ⁇ ), THF (3 ⁇ ), and dichloromethane (3 ⁇ ) and dried in vacuo.
- Excess H 2 O is dried by adding dry Na 2 SO 4 and shaking for 15 minutes. The mixture is filtered under low nitrogen pressure, washed 3 times with 8 mL of dichloromethane and filtered. The filtrate is further dried with Na 2 SO 4 and filtered through a short (1 inch) bed of silica gel 60 for column chromatography (particle size 0.040-0.063 mm) and the solvent is removed in vacuo to give 3,4-dimethoxycinnamaldehyde.
- the dry resin is swelled in anhydrous toluene (18 ml), DBU (1.5 ml; 10 mmol) added and the mixture is shaken for 1 hour. Benzyl bromide (1.19 ml; 10 mmol) is added and the mixture is shaken for 3 days.
- the resin is drained and washed three times each with DCM, DMF, THF and DCM and dried overnight in vacuum.
- To the resin is added THF (6 ml), DMSO (6 ml), 0.5 N HCl (2.5 ml), tetrakis(triphenylphosphine)palladium(0) (347 mg; 15 mol %) and morpholine (4.3 ml) and the mixture is shaken overnight.
- N-(1-propylenecarbonyl)-4-(methyl-O-methylhydroxylane)-2-fluorophenoxymethyl-copoly (styrene-1%-divinylbenzene) resin was re-suspended in dry toluene (30 ml) and DBU (2.93 ml, 19.6 mmol, 5 eq.) was added. The reaction mixture was shaken for 1 hour. Benzyl bromide (2.33 ml, 19.6 mmol, 5 eq.) was then added. The resin was shaken overnight. The resin was filtered, washed with THF ( ⁇ 3), THF;H 2 O (3:1, ⁇ 3), THF ( ⁇ 3), DCM ( ⁇ 3).
- the resin (0.75 g, 0.78 mmol) was suspended in 20% piperidine solution in DMF (10 ml). The mixture was shaken for 2 hours. The solution was filtered and washed with DMF (5) and NMP ( ⁇ 5). The resin was re-suspended in NMP (8 ml) and benzophenone imine (1.3 ml, 7.8 mmol, 10 eq.) and acetic acid (0.40 ml, 7.0 mmol, 9 eq.) was added. The mixture was shaken overnight.
- the resin was filtered, washed with DMF ( ⁇ 3), THF ( ⁇ 3), DCM ( ⁇ 3), MeOH ( ⁇ 3) and THF ( ⁇ 3).
- the O-(diethylphosphonoaceto)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin was dried in vacuo at 40° C. overnight.
- Theoretical loading 1.17 mmol/g.
- Example 56 the benzylic alcohol resin derivate of Example 56 is made as illustrated in Examples 56a-56e.
- the resin is filteredand washed with DMF ( ⁇ 3), THF ( ⁇ 3), DCM ( ⁇ 3), MeOH ( ⁇ 3) and THF ( ⁇ 3).
- the O-(diethylphosphonoacetate)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin is dried in vacuo at 40° C. overnight.
- 19 F (DMF) ⁇ 120, ⁇ 121 ppm.
- Theoretical loading 1.17 mmol/g.
- Trifluoroacetic acid (1 ml) and DCM (1 ml) are added to the resin and the mixture is shaken for 1 hour.
- the solution is filtered into a tared vial and the resin is washed with CH 2 Cl 2 ( ⁇ 3).
- the solvent is removed in vacuo to yield Fmoc-Gly-Phe-OH (12.2 mg, 78%).
- LCMS gives 444 [(M) + , 100%].
- N-4-benzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (1.08 g; 1 mmole), prepared as in Example 44, is washed with DMF (15 ml), suspended in 15 ml of DMF and Boc-Ala-OH (568 mg; 3 mmol) and EDCI (575.1 mg; 3 mmol) are added and the mixture is shaken for 16 hours. The resin is drained and washed with 15 ml of DMF (2 ⁇ ), THF/20% H 2 O (3 ⁇ ), THF (3 ⁇ ), DCM (3 ⁇ ) and dried in vacuo overnight.
- the dry resin is swelled in 12 ml of anhydrous THF under nitrogen, shaken for 10 minutes and cooled to 0° C. for 30 min.
- LAH in THP (0.75 ml; 3 mmol) is added and the mixture is shaken at 0° C. for 30 minutes.
- Saturated KHSO4 (0.5 ml) and K, Na tartrate (0.3 ml) solutions are added and the reaction mixture is shaken for 20 minutes while warming to ambient temperature. Excess water is dried by addition of dry Na 2 SO 4 and shaking for 15 minutes. The mixture is filtered under low nitrogen pressure, washed three times with 8 ml of DCM and filtered.
- the Parallel syntheses are accomplished using a Tecan Combitec organic synthesis robot. Forty eight reaction vessels are placed in the robot's reaction block and a slurry of ethyl phosphonate resin compound in THF is transferred by pipette into each of the reaction vessels. For this synthesis it is found to be more convenient to load the phosphonates to the resin on a large scale, then split the resin into the reaction block.
- the robot dispenses anhydrous THF to the reaction vessels, followed by the solution of base (1.0 molar in THF) as they sit on the deck of the robot in an ice bath.
- the sixteen aldehydes (see Table 1) are prepared as 0.5 molar solutions in 60% cyclohexane in THF.
- the reaction block is then manually moved to an orbital shaker and agitated for one hour at ambient temperature.
- the reaction block is then placed back on the instrument.
- the vessels are then drained, and solutions of the aldehydes are dispensed to their respective reaction vessels.
- the reaction block is then moved to an orbital shaker and agitated for 2-3 days at ambient temperature.
- Work-up of the reaction on the robot consists of draining the vessels and washing the resin with THF, 20% aqueous DMF, DMF, THF, and then dichloromethane. A total of 21 washes are needed to remove all the impurities in the resin matrix.
- the resin is then sampled for single bead FT IR analysis.
- the diagnostic carbonyl shift is a qualitative means of determining whether the reaction has gone to completion.
- the anthranilic acid products are then cleaved from the resin using 30% trifluoroacetic acid (TFA) in dichloromethane.
- TFA trifluoroacetic acid
- the TFA solutions are transferred to pre-tared test tubes contained in a Benchmate II 6 compatible 5 ⁇ 10 position rack, which had been defined on the deck of the robot.
- This format effectively couples sample concentration and weighing.
- Sample concentration is achieved using the Zymark Turbovap concentrator, in which the Benchmate II compatible rack fits, for efficient nitrogen blow-down of the samples.
- the Benchmate II compatible rack containing the desired samples is then placed in a Zymark Turbovap concentrator to remove the solvent (the Turbovap having been modified slightly by coating the manifolds with Teflon to prevent corrosion of the gas nozzles).
- the forty eight samples each containing approximately 3 mL of 30% TFA in dichloromethane are concentrated in about thirty minutes.
- the samples are usually chased with a one milliliter portion of methanol, then re-evaporated, to ensure complete removal of the TFA solution.
- the reaction set is then analyzed by 1 H NMR and LC-MS (See Table 1).
- Step A Wang resin (20 g, 15 mmol) is swelled in 300 mL of anhydrous DMF for 15 minutes. Then a solution of diethyl phosphonoacetic acid (8.83 g, 45 mmol) in 50 mL of DMF is added followed by pyridine (7.12 g, 90 mmol) and 2,6-dichlorobenzoyl chloride (9.4 g, 45 mmol). The mixture is agitated for 20 hours at room temperature. The resin is filtered and washed successively with DMF (3 ⁇ ), H 2 O (3 ⁇ ), DMF (3 ⁇ ), THF (10 ⁇ ) and Et 2 O (10 ⁇ ) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c ⁇ o 1738 cm ⁇ 1
- Step B The loaded resin from Step A (1 g, 0.75 mmol) is swelled in anhydrous THF (10 mL) for 15 minute followed by the addition of a 0.5 M solution of potassium bis(trimethylsilyl)amide in toluene (4 mL) at 0° C. The mixture is allowed to warm up to room temperature and is shaken for 30 minutes. The solvent is then drained to the top of the resin followed by the addition of anhydrous cyclohexane (10 mL) and isovaleraldehyde (0.17 g, 2 mmol). The mixture is shaken for approximately 72 hours and worked up as described in Step A. IR (micro) u c ⁇ o 1718 cm ⁇ 1
- Step C To a solution of 3,4-dimethoxybenzenethiol (11.9 g, 70 mmol) in anhydrous THF (54.4 mL) at 0° C. is added a 2.5 M solution of n-butyllithium (5.6 mL, 14 mmol) and the solution is stirred at room temperature for 15 minutes.
- Step D The resin from step C (0.25 g, 0.19 mmol) is swelled in 1,4-dioxane (5 mL) for 15 minutes and a solution of m-chloroperoxybenzoic acid (0.44 g, 2.5 mmol) in 2 mL of 1,4-dioxane is added. The mixture is shaken for 16 hours and worked up as described in Step A.
- Step E The resin from Step D (0.25 g, 0.19 mmol) is treated with 1:1 dichloro-methane/trifluoroacetic acid (3 mL) for 1-2 hours. The resin is filtered and washed with dichloromethane (2 ⁇ 1 mL). The combined filtrates are concentrated in vacuo to provide 3-(3,4-dimethoxybenzenesulfonyl)-5-methylhexanoic acid (9.8 mg).
- Step F The hydroxylamine bound Wang resin (50 mg, 0.037 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethyl-aminopropyl)-3-ethylcarbodiimide hydrochloride (30 mg, 0.16 mmol) and a solution of the carboxylic acid from Step E in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours and worked up as described in Step A.
- Step G The resin from Step F is treated with 1:1 dichloromethane/trifluoroacetic acid (2 mL) for 1.5 hours. The resin is filtered and washed with dichloro-methane (2 ⁇ 1 mL). The combined filtrates are concentrated in vacuo to provide 3-(3,4-dimethoxybenzenesulfonyl)-5-methylhexanoic acid hydroxyaride (9.8 mg). MS (H-isp; LCMS) m/z 363 (M+NH 4 ) + , 346 (M+H) + .
- Step A The hydroxylamine bound Rink resin (0.1 g, 0.031 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethyl-aminopropyl)-3-ethylcarbodiimide hydrochloride (30 mg, 0.16 mmol) and a solution of the appropriate carboxylic acid prepared as in Example 73, Steps A-E in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours and worked up as described in Example 73, Step A.
- Step B The resin from Step A (0.1 g, 0.031 mmol) is treated with 9:1 dichloromethane/trifluoroacetic acid (2 mL) for 1 hour. The resin is filtered and washed with dichloromethane (2 ⁇ 1 mL). The combined filtrates are concentrated in vacuo to provide the following hydroxamic acids:
- Step A Wang resin (2 g, 1.5 mmol) is swelled in 20 mL of anhydrous DMF for 15 minutes. Then a solution of phosphonoacetic acid in DMF (1.13 g, 4.5 mmol) is added followed by pyridine (0.71 g, 9 mmol) and 2,6-dichloro-benzoyl chloride (0.94 g, 4.5 mmol). The mixture is agitated for 20 hours at room temperature. The resin is filtered and washed successively with DMF (3 ⁇ ), H 2 O (3 ⁇ ), DMF (3 ⁇ ), THF (10 ⁇ ) and Et 2 O (10 ⁇ ) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c ⁇ o 1730 cm ⁇ 1
- Step B The loaded resin from Step A (0.5 g, 0.375 mmol) is swelled in anhydrous THF (5 mL) for 15 minute followed by the addition of a 0.5 M solution of potassium bis(trimethylsilyl)amide in toluene (2 mL) at 0° C. The mixture is allowed to warm up to room temperature and is shaken for 30 minutes. The solvent is drained to the top of the resin followed by the addition of anhydrous cyclohexane(10 mL) and the aldehyde (0.25 g, 1 mmol). The mixture is shaken for approximately 72 hours and worked up as described in Step A. IR (micro) u c ⁇ o 1704 cm ⁇ 1
- Step C To a solution of 3,4 dimethoxybenzenethiol (11.9 g, 70 mmol) in anhydrous THF (54.4 mL) at 0° C. is added a 2.5 M solution of n-butyllithium (5.6 mL, 14 mmol) and the solution is stirred at room temperature for 15 minutes.
- step B The resin from step B (0.2 g, 0.15 mmol) is swelled in anhydrous THF (2.5 mL) for 15 minutes and 4 mL of the above prepared 1 N thiol/thiolate stock solution is added. The mixture is shaken for approximately 100 hours and worked up as described in step A. The thiol addition does not go to completion, as evidenced by IR spectra (u c ⁇ o 1703 cm ⁇ 1 ). The reaction is driven to completion by repeating the above procedure twice. IR (micro) u c ⁇ o 1731 cm ⁇ 1
- Step D The resin from Step C (0.2 g, 0.15 mmol) is swelled in dioxane (5 mL) for 15 minutes and a solution of m-chloroperoxybenzoic acid (0.44 g, 2.5 mmol) in 2 mL of dioxane is added. The mixture is shaken for 16 hours and worked up as described in step A.
- Step E The resin from Step D (0.2 g, 0.15 mmol) is treated with 1:1 dichloro-methane/trifluoroacetic acid (3 mL) for 1-2 hours. The resin is filtered and washed with dichloromethane (2 ⁇ 1 mL). The combined filtrates are concentrated in vacuo to provide 2- ⁇ (3,4dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxyphenyl]methyl ⁇ -4-methylpentanoic acid (40 mg).
- Step F The hydroxylamine bound Rink resin (0.1 g, 0.031 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (20 mg, 0.1 mmol) and a solution of the carboxylic acid from step 5 in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours and worked up as described in step A.
- Step G The resin from Step F (0.1 g, 0.031 mmol) is treated with 9:1 dichloro-methane/trifluoroacetic acid (2 mL) for 1 hour. The resin is filtered and washed with dichloromethane (2 ⁇ 1 mL). The combined filtrates are concentrated in vacuo to provide 2- ⁇ (3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy-phenyl]methyl ⁇ -4-methylpentanoic acid hydroxyamide (2.3 mg). MS (H-isp; LCMS) m/z 546 (M+H) + .
- Step A Wang resin (20 g, 15 mmol) is swelled in 300 mL of anhydrous DMF for 15 minutes. Then a solution of diethyl phosphonoacetic acid (8.83 g, 45 mmol) in 50 mL of DMF is added followed by pyridine (7.12 g, 90 mmol) and 2,6-dichlorobenzoyl chloride (9.4 g, 45 mmol). The mixture is agitated for 20 hours at room temperature. The resin is filtered and washed successively with DMF (3 ⁇ ), H 2 O (3 ⁇ ), DMF (3 ⁇ ), THF (10 ⁇ ) and Et 2 O (10 ⁇ ) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c ⁇ o 1738 cm ⁇ 1
- Step B The loaded resin from Step A (1 g; 0.63 mmol) is swelled in anhydrous THF (10 mL) for 15 minute followed by the addition of a 1 M solution of lithium bis(trimethylsilyl)amide in THF (1.6 mL; 1.57 equiv.) at 0° C. The mixture is allowed to warm up to room temperature and is shaken for 30 minutes. The solvent is then drained to the top of the resin followed by the addition of anhydrous cyclohexane (10 mL) and 4-ethoxy-benzaldehyde (0.5 g; 3.3 mmol). The mixture is shaken for approximately 72 hours.
- Step C To a solution of 4-methoxybenzene thiol (0.6 mL; 5 mmol) in anhydrous THF (1 mL) at 0° C. is added n-butyllithium (2.5 M in hexanes; 0.02 mL; 0.05 mmol) and the solution is stirred at room temperature for 15 minutes.
- the resin from step B (1 g; 0.63 mmol) contained in a polypropylene peptide synthesis cartridge is swelled in anhydrous THF (10 mL) for 15 minutes.
- the above-prepared 1 N thiol/thiolate stock solution is added. The mixture is shaken for approximately 100 hours.
- Step D The resin from Step C (1 g, 0.63 mmol) is swelled in 1,4-dioxane (5 mL) for 15 minutes and a solution of m-chloroperoxybenzoic acid (0.863 g; 5 mmol) in 2 mL of 1,4-dioxane is added. The mixture is shaken for 16 hours, the resin is then filtered and washed successively with DMF (3+), H 2 O (3 ⁇ ), DMF (3 ⁇ ), THF (10 ⁇ ) and Et 2 O (10 ⁇ ) followed by drying in vacuo at 40° C. for 20 hours.
- Step E The resin from Step D (1 g, 0.63 mmol) is treated with 1:1 dichloromethane/trifluoroacetic acid (8 mL) for 1-2 hours. The resin is filtered and washed with dichloromethane (2 ⁇ 1 mL). The combined filtrates are concentrated in vacuo to provide 3-(4-methoxybenzenesulfonyl)-3-(ethoxy-phenyl)propionic acid (84 mg; 34%).
- Step F The hydroxylamine bound Rink resin (200 mg, 0.04 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethyl-aminopropyl)-3-ethylcarbodiimide hydrochloride (38 mg, 0.2 mmol) and a solution of the carboxylic acid from step 5 (84 mg; 0.2 mmol) in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours. The resin is then filtered and washed successively with DMF (3 ⁇ ), H 2 O (3 ⁇ ), DMF (3 ⁇ ), THF (10 ⁇ ) and Et 2 O (10 ⁇ ) followed by drying in vacuo at 40° C. for 20 hours.
- the resin (0.089 g, 100 ⁇ mol, loading 1.12 mmol/g) is swelled in dry benzene (2.5 ml) with gentle agitation for 15 minutes. To the suspension is added tributyltin hydride (0.40 ml, 1.5 mmol) and AIBN (0.008 g, 5 ⁇ mol) and the solution is refluxed overnight. The mixture is cooled, filtered and washed with THF ( ⁇ 3), THF:H 2 O (3:1, ⁇ 3), MeOH ( ⁇ 3), THF ( ⁇ 3) and CH 2 Cl 2 ( ⁇ 3). The resin is dried in vacuo overnight.
- the Library was produced utilizing the IRORI Accutag-10000 Combinatorial Chemistry system.
- the Library was generated in an 18 ⁇ 4 ⁇ 8 ⁇ 18 matrix.
- the appropriate MicroKans (576 per reaction, 14.69 mmoles) are sorted into 1 L erlemyer flasks. Dry DMF (570 mL) is added. The Diazabicycloundecane (21.95 mL, 146.8 mmoles) is added. The reaction flasks are covered with aluminum foil and placed into an orbital shaker and agitated (100 rpm) for one hour at ambient temperature. At the end of this period, the appropriate alkyl halide (176.2 mmoles) and KI (cat., 2 grams) are added. The reaction flasks are placed back into the orbital shaking oven, which is now set to 60° C., and shaken (100 rpm) overnight at 60° C.
- the reactions are allowed to cool to room temperature.
- the reaction mixture is drained.
- the reaction mixtures are washed individually in the following sequence: Wash with DMF, agitate for 10 minutes and drain (repeat 2 ⁇ ). Wash with MeOH, agitate for 10 minutes and drain. Wash with THF, agitate for 10 minutes and drain (repeat 1 ⁇ ). Wash with anhydrous DMF, agitate for 10 minutes and drain (repeat 1 ⁇ ).
- the :o reaction mixture is drained.
- the reaction mixtures are washed individually in the following sequence: Wash with DMF, agitate for 10 minutes and drain (repeat 1 ⁇ ). Wash with MeOH, agitate for 10 minutes and drain.
- the MicroKans are randomly combined into two 10 L three neck round bottom flasks and washed in the following sequence: THF (2 ⁇ 5 l), and MeOH (5 l ) & DCM, alternating (2 ⁇ 51), Rinse with THF twice.
- the MicroKANS are randomly placed into two 12 L three neck round bottom flasks (approximately 5,184 per flask, 77.76 g of resin, 132.3 mmoles).
- the THF (2.5 l) and DMSO (2.5 l) are added.
- Each reaction flask is fitted with an overhead stirrer. Stirring is initiated.
- the morhpholine (288.2 mL; 3.30 mol), tetrakis(triphenylphosphine)palladium(0) (45.82 g; 0.039) and 0.5 N aqueous hydrochloric acid (158.6 mL; 0.5 N) are added in turn.
- the appropriate MicroKans (2592 per reaction, 66.10 mmoles) are sorted into 5 L 3-neck round bottom flasks. Dry DMF (2.5 L) is added. The reaction flasks are fitted with an overhead stirrer. The acetylsalicylic acid (119.1 g, 661 mmoles) is added and stirring initiated. After about 15 minutes, the EDCI (126.7 g, 661 mmoles) is added, and the reaction mixture is stirred for 60 hours. At the end of this period, the reaction mixture is drained. DMF (2.5 L) is added to the reaction flask. After stirring for 15 minutes, the reaction flasks are drained.
- the appropriate MicroKans (1296 per reaction, 33.05 mmoles) are sorted into 2 L Erlemyer flasks. Anhydrous DMF (1.2 L) and DBU (74.11 ml, 495,6 immoles) are added. Hand swirl briefly. The reaction flasks are placed in the Shaker oven and agitated at RT for one hour. At the end of this period, the Cesium Carbonate (flasks 1-4, 6 and 8) and Potassium Carbonate (flasks 5 and 7) are added to the reaction flasks, which are yhrn hand swirled briefly.
- the oven is heated to 60° C., and agitation is continued for 15 hours, at the end of which period the reaction flasks are allowed to cool and drained. They are washed individually according to the following protocol.
- Hand agitate briefly and drain. Repeat 2 ⁇ .
- Hand agitate briefly and drain. Repeat 1 ⁇ .
- the MicroKans are randomly combined into two 10 L three neck round bottom flasks, and washed in the following sequence: Add DMF (5 l). Stir for approximately 20 min and drain. Add THF (5 l). Stir for approximately 20 min and drain. Repeat 1 ⁇ . Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain.
- the appropriate MicroKans (2448 per reaction, 62.42 mmoles) are sorted into four 5 L 3-neck round bottom flasks. Each flask is charged with THF (1.5 L). The methanol (0.75 L) is then added. The reaction flasks are fitted with an overhead stirring apparatus. After stirring for 10 minutes, the aqueous solution of lithium hydroxide (1.5 mol; 750 mL: 2.0 M) is added and stirring continued for 15 hours. At the end of this period, the reaction flasks are drainedand washed individually according to the following protocol. Add THF (1.5 l). Stir for approximately 20 min and drain. Repeat 1 ⁇ . Add MeOH (1.5 l). Stir for approximately 20 min. and drain. Repeat 1 ⁇ .
- the appropriate MicroKans (576 per reaction, 14.69 mmoles) are sorted into 2 L Erlenmeyer flasks. Dry DMF (570 mL) is added. The EDCI (28.16 g, 146.9 mmoles) is addedand the flasks swirled by hand briefly. Then HOBt (19.85 g, 146.9 mmoles) is added and the flasks are swirled by hand briefly, followed by addition of the appropriate amine (132.2 mmoles). Then the flasks are hand swirled briefly,and replaced in the shaker oven, where they are agitated for 15 hours at room temperature.
- the reaction flasks are drained and then washed individually according to the following protocol.
- the MicroKans are randomly combined into two 10 L three neck round bottom flasks and washed in the following sequence: Add THF (5 l). Stir for approximately 20 min. and drain. Repeat 1 ⁇ . Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min.
- the MicroKANs are dried by blowing a stream of nitrogen through the flask with intermittent agitation. After sufficient drying, the MicroKANs are sorted for the cleavage process.
- the MicroKANs are sorted into individual wells of IRORI AccuCleave 96 cleavage stations. Each well is charged with a TFA: dichloromethane mixture (1:1, 1200 mL). After agitating for approximately forty minutes, the reaction wells are drained into 2 mL microtubes in an 96-well format. The reaction wells are again charged with dichloromethane (600 mL). After manual agitation, this too is drained into the 2 mL microtubes in an 96-well format. The cleavage cocktail is removed in vacuo using a Savant Speedvac.
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Abstract
Description
- This application is a division of U.S. patent application No. 09/469,829, filed Dec. 22, 1999, which is a continuation-in-part of International Patent Application No. PCT/US99/14251, filed Jun. 23, 1999, which claims benefit of U.S. patent application No. 09/103,872, filed Jun. 24, 1998, which application is a continuation-in-part of International Patent Application No. PCT/US97/23920, filed Dec. 17, 1997, which claims benefit of U.S. patent application No. 60/032,453, filed Dec. 19, 1996, and U.S. patent application No. 60/033,881, filed Dec. 24, 1996; and a continuation in part of U.S. patent application No. 08/928,943, filed Sep. 12, 1997, which in turn is a continuation of International Patent Application No.PCT/US97/00264, filed Jan. 2, 1997. All the applications identified in the foregoing are incorporated herein by reference.
- This invention is directed to processes for the solid-phase synthesis of aldehyde, ketone, oxime, amine, and hydroxamic acid and α,β-unsaturated carboxylic acid and aldehyde compounds and to polymeric hydroxylamine resin compounds useful therefor.
- Solid-phase synthetic techniques, in which a reagent is immobilized on a polymeric material which is inert to the reagents and reaction conditions employed, as well as being insoluble in the media used, are important synthetic tools for preparing amides, peptides and hydroxamic acids. For solid phase peptide synthesis, a summary of the many techniques may be found in J. M. Stewart and J. D. Young, Solid Phase Peptide Synthesis, 2nd. Ed., Pierce Chemical Co. (Chicago, Ill., 1984); J. Meienhofer, Hormonal Proteins and Peptides, vol. 2, p. 46, Academic Press (New York), 1973; and E. Atherton and R. C. Sheppard, Solid Phase Peptide Synthesis: A Practical Approach, IRL Press at Oxford University Press (Oxford, 1989). For the use of solid phase methodology in the preparation of non-peptide molecules see Leznoff, C. C., Acc. Chem. Res., 11, 327-333 (1978).
- A number of polymeric reagents have found synthetic use in simple functional group transformations. See A. Akelah and D. C. Sherrington, Application of Functionalized Polymers in Organic Synthesis, Chem Rev., 81, 557-587 (1981) and W. T. Ford and E. C. Blossey, Polymer Supported Reagents, Polymer supported Catalysts, and Polymer Supported Coupling Reactions, in Preparative Chemistry using Supported Reagents, Pierre Laszlo, ed., Academic Press, Inc., 193-212 (1987). For the use of polymeric reagents in oxidation reactions see J. M. J. Frechet et al., J. Org. Chem. 43, 2618 (1978) and G. Cainelli et al., J. Am. Chem. Soc., 98, 6737 (1976). For the use of polymeric reagents in halogenation reactions see J. M. J. Frechet et al., J. Macromol. Sci. Chem., A-11, 507 (1977) and D. C. Sherrington et al., Eur. Polym. J., 13, 73, (1977). For the use of polymeric reagents in epoxidation reactions see J. M. J. Frechet et al., Macromolecules, 8, 130 (1975) and C. R. Harrison et al., J. Chem. Soc. Chem. Commun., 1009 (1974). For the use of polymeric reagents in acylation reactions see M. B. Shambhu et al., Tet. Lett., 1627 (1973) and M. B. Shambhu et al., J. Chem. Soc. Chem. Commun., 619 (1974). For the use of polymeric reagents in Wittig reactions see S. V. McKinley et al., J. Chem. Soc. Chem. Commun., 134 (1972).
- Polymeric reagents also have found widespread use in combinatorial synthesis and for preparing combinatorial libraries. See F. Balkenhohl et al., Angew. Chem. Int. Ed. Engl., 35, 2288-2337 (1996) and L. A. Thompson et al., Chem Rev., 96 555-600 (1996).
- A polymeric reagent has the advantage of ease of separation from low molecular weight reactants or products by filtration or selective precipitation. The polymeric reagent also can be used in excess to effect fast and quantitative reactions, such as in the case of acylations, or a large excess of reactants may be used to drive the equilibrium of the reaction towards product formation to provide essentially quantitative conversion to product, as in solid phase peptide synthesis. A further advantage of supported reagents and catalysts is the fact that they are recyclable and that they lend easily to automated processes. In addition, supported analogs of toxic and odorous reagents are safer to use.
- PCT application publication no. WO96/26223 discloses the synthesis of hydroxamic acid compounds using a solid phase hydroxylamine substrate.
- Prasad et al. disclose a O-methylhydroxylamine-polystyrene resin compound in J. Steroid Biochem., 18, 257-261 (1983).
- Resin-bound Weinreb-like amides are disclosed by Fehrentz et al., Tet. Lett., 1995, 36, 7871-7874 and Dinh et al., Tet. Lett., 1996, 37, 1161-1164.
- Polymeric Horner-Wadsworth-Emmons reagents are disclosed by Wipf et al., J. Org. Chem., 1997, 62, 1586 and Johnson et al., Tetrahedron Lett., 1995, 36, 9253.
-
- wherein R c and Ra are independently aliphatic or aromatic, this process comprising
-
-
- is a solid support, L is absent or a linking group and R b is aliphatic or aryl with an organometallic reagent of formula RcM wherein Rc is an aliphatic or aryl anion and M is a metal cation; and
- (b) liberating the ketone compound from the resin.
- In another aspect, this invention is directed to a process for the preparation of an aldehyde compound of formula R aCHO wherein Ra is defined above, comprising
-
-
- , L and R a and Rb are defined above;
- with a reducing agent; and
- (b) liberating the aldehyde compound from the resin.
-
-
- , L and R a and Rb are defined above, comprising
-
-
- (b) reacting the polymeric hydroxamic acid resin compound with an alkylating agent of formula R bLG wherein LG is a leaving group.
-
-
- , L and R a and Rb are defined above, comprising
-
-
-
- (c) coupling the polymeric N-alkylated hydroxylamine resin compound with a carboxylic acid compound of formula R aCO2H.
-
- wherein
- A 2 is a direct bond, alkylene, or NR13;
- R 13 is hydrogen or alkyl;
- R 9 is —L1-R14 or —L2-R15;
- L 1 is a direct bond or alkylene;
- R 14 is hydrogen, aryl, carboxy, cyano, cycloalkyl, cycloalkenyl, cyclocarbamoyl, cycloimidylalkyl, heterocyclyl, heteroaryl, —NH-C(═O)-NH2, (N-carbamoyl)cyclic amine, —C═N-O-C(═O)-NH2, —C(═O)-NY1Y2, —NY1SO2aryl, —NHR13, —SR13 or —OR13;
- L 2 is alkenylene or alkynylene;
- R 15 is hydrogen, aryl, carboxy, cyano, cycloalkyl, cycloalkenyl, heterocyclylalkyl or heteroaryl;
- R 10 and R12 are independently hydrogen or alkyl; or R10 and R12 together form a bond, or R10 and R9 taken together with the carbon atom through which R10 and R9 are attached form spirocycloalkyl;
- R 11 is a group —L3-R16, or R11 and R9 taken together with the carbon atoms through which R11 and R9 are attached form cycloalkylene; or R11 and R12 taken together with the carbon atom through which R11 and R12 are attached form spirocycloalkyl;
- L 3 is a direct bond, alkylene, alkenylene or alkynylene;
- R 16 is hydrogen, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryl, heteroaryl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl, fused heterocyclylheteroaryl, —NH-C(═O)-NH2, —C═N-O-C(═O)-NH2, —C(═O)-NY1Y2; —NY1SO2aryl, —NR13, —SR13, or —OR13;
- Y 1 and Y2 are independently selected from hydrogen, alkyl, aralkyl, and aryl, or Y1 and Y2 taken together with the nitrogen atom to which Y1 and Y2 are attached form azaheterocyclyl;
-
- R 17 is alkyl, or, when Z3 is a direct bond, then R17 is selected from hydrogen, alkyl, alkenyl and alkynyl;
- R 18 is cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryl, heteroaryl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl or fused heterocyclylheteroaryl;
- R 19 is R20, —OR20, —SR20, —SOR20, —SO2R20, —SO2NR20R21, —NR20SO2R21, —NR20R21, —O(C═O)NR20R21, —NR20C(═O)R21, —N(OH)C(═O)R20, or —C(═O)N(OH)R21,
- R 20 and R21 are independently hydrogen, alkyl, alkenyl, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryl, heteroaryl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl, fused heterocyclylheteroaryl, aralkyl or heteroaralkyl; or R20 and R21 taken together with the nitrogen atom to which R20 and R21 are attached form azaheterocyclyl;
- A 3 is a direct bond, alkylene, alkenylene or alkynylene;
- Z 1 and Z3 are independently a direct bond, oxygen, sulfur or NH;
- Z 2 is a direct bond, oxygen or sulfur;
- B, C, D, and E are independently CH or a heteroatom selected from O, S, N, NOR 22 and NR22, or three of B, C, D and E are independently CH or a heteroatom selected from O, S, N or NR22, and the other of B, C, D and E is a direct bond; and one of B, C, D and E that are in adjacent positions is other than O or S;
- R 22 is hydrogen, alkyl, aryl, lower aralkyl, heteroaryl or lower heteroaralkyl;
- Q 1, Q2 and Q3 independently are CH, CX1 or N;
- X 1 is halogen; and
- n is 0, 1 or 2; or
- a prodrug thereof, acid isostere thereof, pharmaceutically acceptable salt thereof, or solvate thereof,
-
- with acid.
-
-
-
-
-
-
-
- and L are as defined herein.
-
- wherein R d and Re are independently H, aliphatic or aromatic, provided that Rd and Re are not both H, and Rf is aliphatic or aromatic, comprising
-
-
-
- (b) reductively cleaving the α-substituted hydroxylamine resin compound.
-
- wherein R g, Rh and Ri are independently aliphatic or aromatic and Ph is phenyl, comprising
-
-
-
- (b) treating the polymeric oximyl lactone compound with aqueous acid.
-
-
-
-
-
- wherein R j and Rk are aliphatic or aromatic and Q is —O— or —CH2—, comprising
-
-
-
- (b) treating the polymeric α-cyclic hydroxylamine resin compound with aqueous acid.
-
-
-
- and L are as defined herein.
-
- wherein R j, Rk and Rl are aliphatic or aromatic and Q is —O— or —CH2—, comprising
-
-
-
- (b) treating the polymeric α-cyclic hydroxylamine resin compound with aqueous acid.
-
-
-
- and L are as defined herein.
-
-
- and L are as defined herein and P is an amine protecting group, provided that P is other than 4-methoxybenzyl or 2,4-dimethoxybenzyl.
-
-
- , A, R 3 and R4 are as defined herein, P1 is an amine protecting group, and R28, R29, and R30 are ring system substituents, or R28 and R29 taken together with the carbon atoms through which they are linked form a 6 membered aryl or a 5 to 6 membered heteroaryl.
-
-
- , and L are as defined herein; R m is H or aliphatic; and Rn is aliphatic or aromatic, comprising
-
- wherein R 20 and R20 are alkyl, with excess base;
- (b) draining the solvent from the reaction vessel; and
- (c) adding a solution of an aldehyde of formula R nCHO in a less polar second solvent.
-
-
- is a solid support containing one or more fluorine atoms.
-
-
- is a solid support containing one or more fluorine atoms, for the solid-phase synthesis of aldehyde, ketone, oxime, amine, and hydroxamic acid and α,β-unsaturated carboxylic acid and aldehyde compounds, wherein the solid support containing one or more fluorine atoms facilitates monitoring and quantifying the solid-phase reactions by 19F NMR. A detailed discussion of the method of quantifying solid-phase reactions by 19F NMR, and the synthesis of fluorinated resins is described in PCT/US98/26512 filed Dec. 14, 1998, the contents of which are incorporated herein by reference.
- As used above, and throughout the description of the invention, the following terms, unless otherwise indicated, shall be understood to have the following meanings.
- “Solid support” means a substrate which is inert to the reagents and reaction conditions described herein, as well as being substantially insoluble in the media used. Representative solid supports include inorganic substrates such as kieselguhr, silica gel, and controlled pore glass; organic polymers including polystyrene, including 1-2% copolystyrene divinyl benzene (gel form) and 20-40% copolystyrene divinyl benzene (macroporous form), polypropylene, polyethylene glycol, polyacrylamide, cellulose, and the like; and composite inorganic/polymeric compositions such as polyacrylamide supported within a matrix of kieselguhr particles. See J. M. Stewart and J. D. Young, Solid Phase Peptide Synthesis, 2nd. Ed., Pierce Chemnical Co. (Chicago, Ill., 1984). Solid support is designated generally as “
- ” throughout the description.
- In addition, “solid support” includes a solid support as described above which is affixed to a second inert support such as the pins described in Technical Manual, Multipin™ SPOC, Chiron Technologies (1995) and references therein which comprise a detachable polyethylene- or polypropylene-based head grafted with an amino functionalized methacrylate copolymer and an inert stem.
- In addition, “solid support” includes polymeric supports such as the polyethylene glycol supports described by Janda et al., Proc. Natl. Acad. Sci. USA, 92, 6419-6423 (1995) and S. Brenner, WO 95/16918, which are soluble in many solvents but can be precipitated by the addition of a precipitating solvent.
- In addition “solid support” includes polymeric supports as described above, containing one or more fluorine atoms. Polymeric supports containing one or more fluorine atoms are prepared by polymerization using methods known in the art so as to incorporate one or more fluorine-containing monomers into the solid support. Representative suitable fluorine-containing monomers include 4-fluorostyrene, 4-trifluoromethylstyrene, 2-fluoro-4-vinylbenzyl chloride and the like. Polymeric supports containing one or more fluorine atoms are readily prepared, for example by copolymerizing mixtures of 4-fluorostyrene, styrene, 1,4-divinylbenzene and 4-vinylbenzyl chloride. A detailed discussion of the method of synthesizing fluorinated resins is described in PCT/US98/26512 filed Dec. 14, 1998, the contents of which are incorporated herein by reference. Solid supports containing one or more fluorine atoms may be designated as
- throughout the description.
- “Polymeric hydroxylamine resin compound” means a solid support as defined above which is chemically modified as is known in the art to incorporate a plurality of hydroxylamine (—ONH 2) or protected hydroxylamine (—ONHP) groups. The hydroxylamine or protected hydroxylamine groups are covalently bound directly to the solid support or attached to the solid support by covalent bonds through a linking group. The polymeric hydroxylamine resin compounds according to the process aspect of this invention are designated herein as
-
- is a solid support as defined herein, L is absent or a linking group and P is an amine protecting group.
- “Linking group” and “linker” mean a group through which the amino, aminomethyl or other functionality may be covalently linked to the solid support. The linking group is generally inert to the reagents and reaction conditions described herein.
- “Amine protecting group” means an easily removable group which is known in the art to protect an amino group against undesirable reaction during synthetic procedures and to be selectively removable. The use of N-protecting groups is well known in the art for protecting nitrogen-containing groups against undesirable reactions during a synthetic procedure, and many such protecting groups are known. CF, for example, T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991), the contents of which are hereby incorporated herein by reference. Preferred N-protecting groups are acyl, including formyl, acetyl, chloroacetyl, trichloroacetyl, o-nitrophenylacetyl, o-nitrophenoxyacetyl, trifluoroacetyl, acetoacetyl, 4-chlorobutyryl, isobutyryl, o-nitrocinnamoyl, picolinoyl, acylisothiocyanate, aminocaproyl, benzoyl and the like, and acyloxy, including methoxycarbonyl; 9-fluorenylmethoxycarbonyl; 2,2,2-trifluoroethoxycarbonyl; 2-trimethylsilylethxoycarbonyl; vinyloxycarbonyl; allyloxycarbonyl; t-butyloxycarbonyl (BOC); 1,1-dimethylpropynyloxycarbonyl; benzyloxycarbonyl (CBZ); p-nitrophenylsulfinyl; p-nitrobenzyloxycarbonyl; 2,4-dichlorobenzyloxycarbonyl; allyloxycarbonyl (Alloc), and the like.
- “Carboxylic acid protecting group” and “acid protecting group” mean an easily removable group which is known in the art to protect a carboxylic acid (—CO 2H) group against undesirable reaction during synthetic procedures and to be selectively removable. The use of carboxylic acid protecting groups is well known in the art, and many such protecting groups are known. CF, for example, T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991), the contents of which are hereby incorporated herein by reference. Examples of carboxylic acid protecting groups include esters such as methoxymethyl, methylthiomethyl, tetrahydropyranyl, benzyloxymethyl, substituted and unsubstituted phenacyl, 2,2,2-trichloroethyl, tert-butyl, cinnamyl, substituted and unsubstituted benzyl, trimethylsilyl, allyl, and the like, and amides and hydrazides including N,N-dimethyl, 7-nitroindolyl, hydrazide, N-phenylhydrazide, and the like. Especially preferred carboxylic acid protecting groups are tert-butyl and benzyl.
- “Hydroxy protecting group” means an easily removable group which is known in the art to protect a hydroxy group against undesirable reaction during synthetic procedures and to be selectively removable. The use of hydroxy protecting groups is well known in the art, and many such protecting groups are known. See., for example, T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991). Examples of hydroxy protecting groups include ethers such as methyl; substituted methyl ethers such as methoxymethyl (MOM), methylthiomethyl (MTM), 2-methoxyethoxymethyl (MEM), bis(2-chloroethoxy)methyl, tetrahydropyranyl (THP), tetrahydrothiopyranyl, 4-methoxytetrahydropyranyl, 4-methoxytetrahydrothiopyranyl, tetrahydrofuranyl, tetrahydrothiofuranyl, and the like; substituted ethyl ethers such as 1-ethoxyethyl, 1-methyl-1-methoxyethyl, 2-(phenylselenyl)ethyl, t-butyl, allyl, benzyl, o-nitrobenzyl, triphenylmethyl, a-naphthyldiphenylmethyl, p-methoxyphenyldiphenylmethyl, 9-(9-phenyl-10-oxo)anthranyl (tritylone), and the like; silyl ethers such as trimethylsilyl (TMS), isopropyldimethylsilyl, t-butyldimethylsilyl (TBDMS), t-butyldiphenylsilyl, tribenzylsilyl, tri-p-xylylsilyl, triisopropylsilyl, and the like; esters such as formate, acetate, trichloroacetate, phenoxyacetate, isobutyrate, pivaloate, adamantoate, benzoate, 2,4,6-trimethylbenzoate, and the like; and carbonates such as methyl, 2,2,2-trichloroethyl, allyl, p-nitrophenyl, benzyl, p-nitrobenzyl, S-benzyl thiocarbonate, and the like.
- “Amino acid” means an amino acid selected from the group consisting of natural and unnatural amino acids as defined herein.
- “Natural amino acid” means an α-amino acid selected from the group consisting of alanine, valine, leucine, isoleucine, proline, phenylalanine, tryptophan, methionine, glycine, serine, threonine, cysteine, tyrosine, asparagine, glutamine, lysine, arginine, histidine, aspartic acid and glutamic acid.
- “Unnatural amino acid” means an amino acid for which there is no nucleic acid codon. Examples of unnatural amino acids include, for example, the D-isomers of the natural α-amino acids as indicated above; aminobutyric acid (Aib), 3-aminoisobutyric acid (bAib), norvaline (Nva), β-Ala, 2-aminoadipic acid (Aad), 3-aminoadipic acid (bAad), 2-aminobutyric acid (Abu), γ-aminobutyric acid (Gaba), 6-aminocaproic acid (Acp), 2,4-diaminobutryic acid (Dbu), α-aminopimelic acid, trimethylsilyl-Ala (TMSA), allo-isoleucine (alle), norleucine (Nle), tert-Leu, citrulline (Cit), ornithine (Orn), 2,2′-diaminopimelic acid) (Dpm), 2,3-diaminopropionic acid (Dpr), α- or β-Nal, cyclohexyl-Ala (Cha), hydroxyproline, sarcosine (Sar), and the like; cyclic amino acids; N α-alkylated amino acids such as Nα-methylglycine (MeGly), Nα-ethylglycine (EtGly) and Nα-ethylasparagine (EtAsn); and amino acids in which the α-carbon bears two side-chain substituents.
- “Equivalent amino acid” means an amino acid which may be substituted for another amino acid in the peptides according to the invention without any appreciable loss of function. In making such changes, substitutions of like amino acids is made on the basis of relative similarity of side chain substituents, for example regarding size, charge, hydrophilicity, hydropathicity and hydrophobicity as described herein.
- “Peptide” and “polypeptide” mean a polymer in which the monomers are natural or unnatural amino acid residues joined together through amide bonds. The term “peptide backbone” means the series of amide bonds through which the amino acid residues are joined. The term “amino acid residue” means the individual amino acid units incorporated into the peptides or polypeptides.
- “Aliphatic” means a radical derived from a non aromatic C—H bond by removal of the hydrogen atom. The aliphatic radical may be further substituted by additional aliphatic or aromatic radicals as defined herein. Representative aliphatic groups include alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aralkenyl, aralkyloxyalkyl, aralkyloxycarbonylalkyl, aralkyl, aralkynyl, aralkyloxyalkenyl, heteroaralkenyl, heteroaralkyl, heteroaralkyloxyalkenyl, heteroaralkyloxyalkyl, heteroaralkynyl, fused arylcycloalkyl, fused heteroarylcycloalkyl, fused arylcycloalkenyl, fused heteroarylcycloalkenyl, fused arylheterocyclyl, fused heteroarylheterocyclyl, fused arylheterocyclenyl, fused heteroarylheterocyclenyl, and the like. “Aliphatic”, as used herein, also encompasses the residual, non-carboxyl portion of natural and unnatural amino acids as defined herein.
- “Aromatic” means a radical derived from an aromatic C—H bond by removal of the hydrogen atom. Aromatic includes both aryl and heteroaryl rings as defined herein. The aryl or heteroaryl ring may be further substituted by additional aliphatic or aromatic radicals as defined herein. Representative aromatic groups include aryl, fused cycloalkenylaryl, fused cycloalkylaryl, fused heterocyclylaryl, fused heterocyclenylaryl, heteroaryl, fused cycloalkylheteroaryl, fused cycloalkenylheteroaryl, fused heterocyclenylheteroaryl, fused heterocyclylheteroaryl, and the like.
- “Acid bioisostere” means a group which has chemical and physical similarities producing broadly similar biological properties to a carboxylic group (see Lipinski, Annual Reports in Medicinal Chemistry, 1986,21,p283 “Bioisosterism In Drug Design”; Yun, Hwahak Sekye, 1993,33,p576-579 “Application Of Bioisosterism To New Drug Design”; Zhao, Huaxue Tongbao, 1995,p34-38 “Bioisosteric Replacement And Development Of Lead Compounds In Drug Design”; Graham, Theochem, 1995,343,p105-109 “Theoretical Studies Applied To Drug Design: ab initio Electronic Distributions In Bioisosteres”). Examples of suitable acid bioisosteres include: —C(═O)-NH-OH, —C(═O)-CH 2OH, —C(═O)-CH2SH, —C(═O)-NH-CN, sulpho, phosphono, alkylsulfonylcarbamoyl, tetrazolyl, arylsulfonylcarbamoyl, heteroarylsulfonylcarbamoyl, N-methoxycarbamoyl, 3-hydroxy-3-cyclobutene-1,2-dione, 3,5-dioxo-1,2,4-oxadiazolidinyl or heterocyclic phenols such as 3-hydroxyisoxazolyl and 3-hydoxy-1-methylpyrazolyl.
- “Acyl” means an H—CO— or alkyl-CO— group wherein the alkyl group is as herein described. Preferred acyls contain a lower alkyl. Exemplary acyl groups include fornyl, acetyl, propanoyl, 2-methylpropanoyl, butanoyl and palmitoyl.
- “Acylamino” is an acyl-NH— group wherein acyl is as defined herein.
- “Alkenoyl” means an alkenyl-CO— group wherein alkenyl is as defined herein.
- “Alkenyl” means a straight or branched aliphatic hydrocarbon group of 2 to about 15 carbon atoms which contains at least one carbon-carbon double bond. Preferred alkenyl groups have 2 to about 12 carbon atoms; more preferred alkenyl groups have 2 to about 4 carbon atoms. The alkenyl group is optionally substituted with one or more alkyl group substituents as defined herein. Representative alkenyl groups include ethenyl, propenyl, n-butenyl, i-butenyl, 3-methylbut-2-enyl, n-pentenyl, heptenyl, octenyl, cyclohexylbutenyl and decenyl.
- “Alkenyloxy” means an alkenyl-O— group wherein the alkenyl group is as herein described. Representative alkenyloxy groups include allyloxy or 3-butenyloxy.
- “Alkoxy” means an alkyl-O— group wherein the alkyl group is as defined herein. Representative alkoxy groups include methoxy, ethoxy, n-propoxy, i-propoxy, n-butoxy, heptoxy, and the like.
- “Alkoxyalkyl” means an alkyl-O-alkylene- group wherein alkyl and alkylene are as defined herein. Representative alkoxyalkyl groups include methoxyethyl, ethoxymethyl, n-butoxymethyl and cyclopentylmethyloxyethyl.
- “Alkoxyalkoxy” means an alkyl-O-alkylenyl-O— group. Representative alkoxyalkoxy include methoxymethoxy, methoxyethoxy, ethoxyethoxy, and the like.
- “Alkoxycarbonyl” means an ester group; i.e. an alkyl-O-CO— group wherein alkyl is as defined herein. Representative alkoxycarbonyl groups include methoxycarbonyl, ethoxycarbonyl, t-butyloxycarbonyl, and the like.
- “Alkoxycarbonylalkyl” means an alkyl-O-CO-alkylene— group wherein alkyl and alkylene are as defined herein. Representative alkoxycarbonylalkyl include methoxycarbonylmethyl, and ethoxycarbonylmethyl, methoxycarbonyl ethyl, and the like.
- “Alkyl” means an aliphatic hydrocarbon group, which may be straight or branched-chain, having about 1 to about 20 carbon atoms in the chain. Preferred alkyl groups have 1 to about 12 carbon atoms in the chain. Branched means that one or more lower alkyl groups such as methyl, ethyl or propyl are attached to a linear alkyl chain. “Lower alkyl” means 1 to about 4 carbon atoms in the chain, which may be straight or branched. The alkyl is optionally substituted with one or more “alkyl group substituents” which may be the same or different, and include halo, cycloalkyl, hydroxy, alkoxy, amino, carbamoyl, acylamino, aroylamino, carboxy, alkoxycarbonyl, aralkyloxycarbonyl, or heteroaralkyloxycarbonyl. Representative alkyl groups include methyl, trifluoromethyl, cyclopropylmethyl, cyclopentylmethyl, ethyl, n-propyl, i-propyl, n-butyl, t-butyl, n-pentyl, 3-pentyl, methoxyethyl, carboxymethyl, methoxycarbonylethyl, benzyloxycarbonylmethyl, and pyridylmethyloxycarbonylmethyl.
- “Alkylene” means a straight or branched bivalent hydrocarbon chain of 1 to about 6 carbon atoms. The alkylene is optionally substituted with one or more “alkylene group substituents” which may be the same or different, and include halo, cycloalkyl, hydroxy, alkoxy, carbamoyl, carboxy, cyano, aryl, heteroaryl or oxo. The alkylene is optionally interrupted by, i.e., a carbon thereof is substituted by, —O—, —S(O) m (where m is 0-2), phenylene or —NR′— (where R′ is lower alkyl). Preferred alkylene groups are the lower alkylene groups having 1 to about 4 carbon atoms. Representative alkylene groups include methylene, ethylene, and the like.
- “Alkenylene” means a straight or branched bivalent hydrocarbon chain containing at least one carbon-carbon double bond. The alkenylene is optionally substituted with one or more “alkylene group substituents” as defined herein. The alkenylene is optionally interrupted by, i.e., a carbon thereof is substituted by, —O—, —S(O) m (where m is 0-2), phenylene or —NR′— (where R′ is lower alkyl). Representative alkenylene include —CH═CH—, —CH2CH═CH—, —C(CH3)═CH—, —CH2CH═CHCH2—, and the like.
- “Alkynylene” means a straight or branched bivalent hydrocarbon chain containing at least one carbon-carbon triple bond. The alkynylene is optionally substituted with one or more “alkylene group substituents” as defined herein. The alkynylene is optionally interrupted by, i.e., a carbon thereof is substituted for, —O—, —S(O) m (where m is 0-2), phenylene or —NR′— (where R′ is lower alkyl). Representative alkynylene include
- and the like.
- “Alkylsulfinyl” means an alkyl-SO— group wherein the alkyl group is as defined above. Preferred alkylsulfinyl groups are those wherein the alkyl group is lower alkyl.
- “Alkylsulfonyl” means an alkyl-SO 2-group wherein the alkyl group is as defined herein. Preferred alkylsulfonyl groups are those wherein the alkyl group is lower alkyl.
- “Alkylsulfonylcarbamoyl” means an alkyl-SO 2-NH-CO— group wherein alkyl group is defined herein. Preferred alkylsulfonylcarbamoyl groups are those wherein the alkyl group is lower alkyl.
- “Alkylthio” means an alkyl-S— group wherein the alkyl group is as defined herein. Preferred alkylthio groups are those wherein the alkyl group is lower alkyl. Representative alkylthio groups include methylthio, ethylthio, i-propylthio, heptylthio, and the like.
- “Alkynyl” means a straight or branched aliphatic hydrocarbon group of 2 to about 15 carbon atoms which contains at least one carbon-carbon triple bond. Preferred alkynyl groups have 2 to about 12 carbon atoms. More preferred alkynyl groups contain 2 to about 4 carbon atoms. “Lower alkynyl” means alkynyl of 2 to about 4 carbon atoms. The alkynyl group may be substituted by one or more alkyl group substituents as defined herein. Representative alkynyl groups include ethynyl, propynyl, n-butynyl, 2-butynyl, 3-methylbutynyl, n-pentynyl, heptynyl, octynyl, decynyl, and the like.
- “Alkynyloxy” means an alkynyl-O— group wherein the alkynyl group is as defined herein. Representative alkynyloxy groups include propynyloxy, 3-butynyloxy, and the like.
- “Alkynyloxyalkyl” means alkynyl-O-alkylene— group wherein alkynyl and alkylene are as defined herein.
-
- wherein R 25 is hydrogen; R27O2C— wherein R27 is hydrogen, alkyl, aralkyl or heteroaralkyl; R27O—; R27C(O)—; cyano; alkyl; nitro; or amino, and R26 is selected from hydrogen; alkyl; aralkyl; and heteroaralkyl.
- “Amino” means a group of formula Y 1Y2N— wherein Y and Y are independently hydrogen; acyl; or alkyl, or Y1 and Y2 taken together with the N through which Y1 and Y2 are linked form a 4 to 7 membered azaheterocyclyl. Representative amino groups include amino (H2N—), methylamino, dimethylanino, diethylamino, and the like.
- “Aminoalkyl” means an amino-alkylene- group wherein amino and alkylene are defined herein. Representative aminoalkyl groups include aminomethyl, aminoethyl, dimethylaminomethyl, and the like.
- “Aralkenyl” means an aryl-alkenylene- group wherein aryl and alkenylene are as defined herein. Preferred aralkenyls contain a lower alkenylene moiety. A representative aralkenyl group is 2-phenethenyl.
- “Aralkyloxy” means an aralkyl-O- group wherein aralkyl is defined herein. Representative aralkyloxy groups include benzyloxy, naphth-1-ylmethoxy, naphth-2-ylmethoxy, and the like.
- “Aralkyloxyalkyl” means an aralkyl-O-alkylene- group wherein aralkyl and alkylene are as defined herein. A representative aralkyloxyalkyl group is benzyloxyethyl.
- “Aralkyloxycarbonyl” means an aralkyl-O-CO— group wherein aralkyl is as defined herein. A representative aralkoxycarbonyl group is benzyloxycarbonyl.
- “Aralkyloxycarbonylalkyl” means an aralkoxycarbonyl-alkylene- group wherein aralkyloxycarbonyl and alkylene are as defined herein. Representative aralkoxycarbonylalkyls include benzyloxycarbonylmethyl, and benzyloxycarbonylethyl.
- “Aralkyl” means an aryl-alkylene- group wherein aryl and alkylene are as defined herein. Preferred aralkyls contain a lower alkyl moiety. Representative aralkyl groups include benzyl, 2-phenethyl, naphthlenemethyl, and the like.
- “Aralkyloxyalkenyl” means an aralkyl-O-alkenylene- group wherein aralkyl and alkenylene are as defined herein. A representative aralkyloxyalkenyl group is 3-benzyloxyallyl.
- “Aralkylsulfonyl” means an aralkyl-SO 2— group wherein aralkyl is as defined herein.
- “Aralkylsulfinyl” means an aralkyl-SO— group wherein aralkyl is as defined herein.
- “Aralkylthio” means an aralkyl-S— group wherein aralkyl is as defined herein. A representative aralkylthio group is benzylthio.
- “Aroyl” means an aryl-CO— group wherein aryl is defined herein. Representative aroyl include benzoyl, naphth-1-oyl and naphth-2-oyl.
- “Cycloalkyl” means a non-aromatic mono- or multicyclic ring system of about 3 to about 10 carbon atoms, preferably of about 5 to about 10 carbon atoms. Preferred cycloalkyl rings contain about 5 to about 6 ring atoms. The cycloalkyl is optionally substituted with one or more “ring system substituents” which may be the same or different, and are as defined herein, or where R 18 is a substituted cycloalkyl, the cycloalkyl is substituted by one or more (e.g. 1, 2 or 3) substituents chosen from OR23, SR24, SOR24, SO2R24, NH2, NR22R24, ═NOR24, ═NOH, ═NNHR24, ═NOCONHR24, ═NCO2R24, SOR24, NHCOR24, NHSO2R24, SO2NR22R24, R23, CONHR24, CONHCH2CO2R22, CONR24R22, N3 or azaheterocyclyl; wherein R22 is as defined herein; R23 is hydrogen, alkyl, cycloalkyl, aryl, arylalkyl, heteroaryl or heteroarylalkyl; and R24 is alkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, aryl, arylalkyl, heteroaryl or heteroarylalkyl. Representative monocyclic cycloalkyl include cyclopentyl, cyclohexyl, cycloheptyl, and the like. Representative multicyclic cycloalkyl include 1-decalin, norbornyl, adamantyl, and the like. The prefix spiro before cycloalkyl means that geminal substituents on a carbon atom are replaced to form 1,1-cycloalkyl. “Cycloalkylene” means a bivalent cycloalkyl having about 4 to about 8 carbon atoms. Preferred cycloalkylenyl groups include 1,2-, 1,3-, or 1,4- cis or trans-cyclohexylene.
- “Cycloalkenyl” means a non-aromatic mono- or multicyclic ring system of about 3 to about 10 carbon atoms, preferably of about 5 to about 10 carbon atoms which contains at least one carbon-carbon double bond. Preferred cycloalkylene rings contain about 5 to about 6 ring atoms. The cycloalkenyl is optionally substituted with one or more “ring system substituents” which may be the same or different, and are as defined herein. Representative monocyclic cycloalkenyl include cyclopentenyl, cyclohexenyl, cycloheptenyl, and the like. A representative multicyclic cycloalkenyl is norbornylenyl.
-
- in which the cyclocarbamoyl group consists of the oxooxazaheterocyclyl ring moiety, and the alkylene group is as defined herein. The alkylene moiety may be attached to the carbamoyl through either a carbon atom or the nitrogen atom of the carbamoyl moiety. An exemplary cyclocarbamoylalkyl group is N-oxazolidinylpropyl.
-
- in which the imide group consists of the oxodiazaheterocyclyl ring moiety, and alkylene is as defined herein. The alkylene moiety may be attached to the carbamoyl through either a carbon atom or nitrogen atom of the carbamoyl moiety. An exemplary cycloimidylalkyl group is N-phthalimidepropyl.
- “Heterocyclenyl” means a non-aromatic monocyclic or multicyclic ring system of about 3 to about 10 ring atoms, preferably about 5 to about 10 ring atoms, in which one or more of the atoms in the ring system is/are element(s) other than carbon, for example nitrogen, oxygen or sulfur atoms, and which contains at least one carbon-carbon double bond or carbon-nitrogen double bond. Preferred heterocyclenyl rings contain about 5 to about 6 ring atoms. The prefix aza, oxa or thia before heterocyclenyl means that at least a nitrogen, oxygen or sulfur atom, respectively, is present as a ring atom. The heterocyclenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen or sulphur atom of the heterocyclenyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide. Representative monocyclic azaheterocyclenyl groups include 1,2,3,4- tetrahydropyridine, 1,2-dihydropyridyl, 1,4-dihydropyridyl, 1,2,3,6-tetrahydropyridine, 1,4,5,6-tetrahydropyrimidine, 2-pyrrolinyl, 3-pyrrolinyl, 2-imidazolinyl, 2-pyrazolinyl, and the like. Representative oxaheterocyclenyl groups include 3,4-dihydro-2H-pyran, dihydrofuranyl, fluorodihydrofuranyl, and the like. A representative multicyclic oxaheterocyclenyl group is 7-oxabicyclo[2.2.1]heptenyl. Representative monocyclic thiaheterocyclenyl rings include dihydrothiophenyl, dihydrothiopyranyl, and the like
- “Heterocyclyl” means a non-aromatic saturated monocyclic or multicyclic ring system of about 3 to about 10 ring atoms, preferably about 5 to about 10 ring atoms, in which one or more of the atoms in the ring system is/are element(s) other than carbon, for example nitrogen, oxygen or sulfur. Preferred heterocyclyls contain about 5 to about 6 ring atoms. The prefix aza, oxa or thia before heterocyclyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom. The heterocyclyl is optionally substituted by one or more “ring system substituents” which may be the same or different, and are as defined herein, or wherein R 18 is a substituted heterocyclyl, the heterocyclyl is substituted the ring carbon atoms by one or more (e.g. 1, 2 or 3) substituents chosen from oxo, cyano, CO2R22, CONHCH2CO2R22, aryl, arylalkyl, alkyl or hydroxyalkyl, or is substituted on a ring nitrogen atom by a substituent chosen from R22, (CH2)nCO2H, (CH2)nCO2R24, (CH2)nCONR22R24, (CH2)nCOR24, CONH2, CONHR24, COR24, SO2R24, or OR24, wherein R22 and R24 are as defined herein. The nitrogen or sulphur atom of the heterocyclyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide. Representative monocyclic heterocyclyl rings include piperidyl, pyrrolidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiazolidinyl, 1,3-dioxolanyl, 1,4-dioxanyl, tetrahydrofuranyl, tetrahydrothiophenyl, tetrahydrothiopyranyl, and the like.
- “Aryl” means an aromatic monocyclic or multicyclic ring system of 6 to about 14 carbon atoms, preferably of 6 to about 10 carbon atoms. The aryl is optionally substituted with one or more “ring system substituents” which may be the same or different, and are as defined herein. Representative aryl groups include phenyl and naphthyl.
- “Heteroaryl” means an aromatic monocyclic or multicyclic ring system of about 5 to about 14 ring atoms, preferably about 5 to about 10 ring atoms, in which one or more of the atoms in the ring system is/are element(s) other than carbon, for example nitrogen, oxygen or sulfur. Preferred heteroaryls contain about 5 to about 6 ring atoms. The “heteroaryl” is optionally substituted by one or more “ring system substituents” which may be the same or different, and are as defined herein. The prefix aza, oxa or thia before heteroaryl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom. A nitrogen atom of a heteroaryl is optionally oxidized to the corresponding N-oxide. Representative heteroaryls include pyrazinyl, furanyl, thienyl, pyridyl, pyrimidinyl, isoxazolyl, isothiazolyl, oxazolyl, thiazolyl, pyrazolyl, furazanyl, pyrrolyl, pyrazolyl, triazolyl, 1,2,4-thiadiazolyl, pyrazinyl, pyridazinyl, quinoxalinyl, phthalazinyl, imidazo[1,2-a]pyridine, imidazo[2,1-b]thiazolyl, benzofurazanyl, indolyl, azaindolyl, benzimidazolyl, benzothienyl, quinolinyl, imidazolyl, thienopyridyl, quinazolinyl, thienopyrimidyl, pyrrolopyridyl, imidazopyridyl, isoquinolinyl, benzoazaindolyl, 1,2,4-triazinyl, benzothiazolyl and the like.
- “Fused arylcycloalkenyl” means a radical derived from a fused aryl and cycloalkenyl as defined herein by removal of hydrogen atom from the cycloalkenyl portion. Preferred fused arylcycloalkenyls are those wherein aryl is phenyl and the cycloalkenyl consists of about 5 to about 6 ring atoms. The fused arylcycloalkenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. Representative fused arylcycloalkenyl include 1,2-dihydronaphthalene, indene, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused cycloalkenylaryl” means a radical derived from a fused aryl and cycloalkenyl as defined herein by removal of hydrogen atom from the aryl portion. Representative fused cycloalkenylaryl are as described herein for a fused arylcycloalkenyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused arylcycloalkyl” means a radical derived from a fused aryl and cycloalkyl as defined herein by removal of a hydrogen atom from the cycloalkyl portion. Preferred fused arylcycloalkyls are those wherein aryl is phenyl and the cycloalkyl consists of about 5 to about 6 ring atoms. The fused arylcycloalkyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. Representative fused arylcycloalkyl includes 1,2,3,4-tetrahydronaphthyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused cycloalkylaryl” means a radical derived from a fused aryl and cycloalkyl as defined herein by removal of a hydrogen atom from the aryl portion. Representative fused cycloalkylaryl are as described herein for a fused arylcycloalkyl radical, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused arylheterocyclenyl” means a radical derived from a fused aryl and heterocyclenyl as defined herein by removal of a hydrogen atom from the heterocyclenyl portion. Preferred fused arylheterocyclenyls are those wherein aryl is phenyl and the heterocyclenyl consists of about 5 to about 6 ring atoms. The prefix aza, oxa or thia before the heterocyclenyl portion of the fused arylheterocyclenyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom. The fused arylheterocyclenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen or sulphur atom of the heterocyclenyl portion of the fused arylheterocyclenyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide. Representative fused arylheterocyclenyl include 3H-indolinyl, 1H-2-oxoquinolyl, 2H-1-oxoisoquinolyl, 1,2-dihydroquinolinyl, 3,4-dihydroquinolinyl, 1,2-dihydroisoquinolinyl, 3,4-dihydroisoquinolinyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused heterocyclenylaryl” means a radical derived from a fused aryl and heterocyclenyl as defined herein by removal of a hydrogen atom from the aryl portion. Representative fused heterocyclenylaryl are as defined herein for a fused arylheterocyclenyl radical, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused arylheterocyclyl” means a radical derived from a fused aryl and heterocyclyl as defined herein by removal of a hydrogen atom from the heterocyclyl portion. Preferred fused arylheterocyclyls are those wherein aryl is phenyl and the heterocyclyl consists of about 5 to about 6 ring atoms. The prefix aza, oxa or thia before heterocyclyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom. The fused arylheterocyclyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen or sulphur atom of the heterocyclyl portion of the fused arylheterocyclyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide. Representative preferred fused arylheterocyclyl ring systems include phthalimide, 1,4-benzodioxane, indolinyl, 1,2,3,4-tetrahydroisoquinoline, 1,2,3,4-tetrahydroquinoline, 1H-2,3-dihydroisoindolyl, 2,3-dihydrobenz[f]isoindolyl, 1,2,3,4-tetrahydrobenz[g]isoquinolinyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused heterocyclylaryl” means a radical derived from a fused aryl and heterocyclyl as defined herein by removal of a hydrogen atom from the heterocyclyl portion. Representative preferred fused heterocyclylaryl ring systems are as described for fused arylheterocyclyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused heteroarylcycloalkenyl” means a radical derived from a fused heteroaryl and cycloalkenyl as defined herein by removal of a hydrogen atom from the cycloalkenyl portion. Preferred fused heteroarylcycloalkenyls are those wherein the heteroaryl and the cycloalkenyl each contain about 5 to about 6 ring atoms. The prefix aza, oxa or thia before heteroaryl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom. The fused heteroarylcycloalkenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen atom of the heteroaryl portion of the fused heteroarylcycloalkenyl is optionally oxidized to the corresponding N-oxide. Representative fused heteroarylcycloalkenyl include 5,6-dihydroquinolyl, 5,6-dihydroisoquinolyl, 5,6-dihydroquinoxalinyl, 5,6-dihydroquinazolinyl, 4,5-dihydro-1H-benzimidazolyl, 4,5-dihydrobenzoxazolyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused cycloalkenylheteroaryl” means a radical derived from a fused heteroaryl and cycloalkenyl as defined herein by removal of a hydrogen atom from the heteroaryl portion. Representative fused cycloalkenylheteroaryl are as described herein for fused heteroarylcycloalkenyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused heteroarylcycloalkyl” means a radical derived from a fused heteroaryl and cycloalkyl as defined herein by removal of a hydrogen atom from the cycloalkyl portion. Preferred fused heteroarylcycloalkyls are those wherein the heteroaryl thereof consists of about 5 to about 6 ring atoms and the cycloalkyl consists of about 5 to about 6 ring atoms. The prefix aza, oxa or thia before heteroaryl means that at least a nitrogen, oxygen or sulfur atom is present respectively as a ring atom. The fused heteroarylcycloalkyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen atom of the heteroaryl portion of the fused heteroarylcycloalkyl is optionally oxidized to the corresponding N-oxide. Representative fused heteroarylcycloalkyl include 5,6,7,8-tetrahydroquinolinyl, 5,6,7,8-tetrahydroisoquinolyl, 5,6,7,8-tetrahydroquinoxalinyl, 5,6,7,8-tetrahydroquinazolyl, 4,5,6,7-tetrahydro-1H-benzimidazolyl, 4,5,6,7-tetrahydrobenzoxazolyl, 1H4-oxa-1,5-diazanaphthalen-2-onyl, 1,3-dihydroimidizole-[4,5]-pyridin-2-onyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused cycloalkylheteroaryl” means a radical derived from a fused heteroaryl and cycloalkyl as defined herein by removal of a hydrogen atom from the heteroaryl portion. Representative fused cycloalkylheteroaryl are as described herein for fused heteroarylcycloalkyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused heteroarylheterocyclenyl” means a radical derived from a fused heteroaryl and heterocyclenyl as defined herein by the removal of a hydrogen atom from the heterocyclenyl portion. Preferred fused heteroarylheterocyclenyls are those wherein the heteroaryl thereof consists of about 5 to about 6 ring atoms and the heterocyclenyl consists of about 5 to about 6 ring atoms. The prefix aza, oxa or thia before heteroaryl or heterocyclenyl means that at least a nitrogen, oxygen or sulfur atom is present respectively as a ring atom. The fused heteroarylheterocyclenyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen atom of the heteroaryl portion of the fused heteroarylheterocyclenyl is optionally oxidized to the corresponding N-oxide. The nitrogen or sulphur atom of the heterocyclenyl portion of the fused heteroarylheterocyclenyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide. Representative fused heteroarylheterocyclenyl include 7,8-dihydro[1,7]naphthyridinyl, 1,2-dihydro[2,7]naphthyridinyl, 6,7-dihydro-3H-imidazo[4,5-c]pyridyl, 1,2-dihydro- 1,5-naphthyridinyl, 1,2-dihydro-1,6-naphthyridinyl, 1,2-dihydro-1,7-naphthyridinyl, 1,2-dihydro- 1,8-naphthyridinyl, 1,2-dihydro-2,6-naphthyridinyl, and the like, in which the bond to the parent moiety is through a non aromatic carbon atom.
- “Fused heterocyclenylheteroaryl” means a radical derived from a fused heteroaryl and heterocyclenyl as defined herein by the removal of a hydrogen atom from the heteroaryl portion. Representative fused heterocyclenylheteroaryl are as described herein for fused heteroarylheterocyclenyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Fused heteroarylheterocyclyl” means a radical derived from a fused heteroaryl and heterocyclyl as defined herein, by removal of a hydrogen atom from the heterocyclyl portion. Preferred fused heteroarylheterocyclyls are those wherein the heteroaryl thereof consists of about 5 to about 6 ring atoms and the heterocyclyl consists of about 5 to about 6 ring atoms. The prefix aza, oxa or thia before the heteroaryl or heterocyclyl portion of the fused heteroarylheterocyclyl means that at least a nitrogen, oxygen or sulfur atom respectively is present as a ring atom. The fused heteroarylheterocyclyl is optionally substituted by one or more ring system substituents, wherein “ring system substituent” is as defined herein. The nitrogen atom of the heteroaryl portion of the fused heteroarylheterocyclyl is optionally oxidized to the corresponding N-oxide. The nitrogen or sulphur atom of the heterocyclyl portion of the fused heteroarylheterocyclyl is optionally oxidized to the corresponding N-oxide, S-oxide or S,S-dioxide. Representative fused heteroarylheterocyclyl include 2,3-dihydro-1H pyrrol[3,4-b]quinolin-2-yl, 1,2,3,4-tetrahydrobenz [b][1,7]naphthyridin-2-yl, 1,2,3,4-tetrahydrobenz [b][1,6]naphthyridin-2-yl, 1,2,3,4-tetrahydro-9H-pyrido[3,4-b]indol-2yl, 1,2,3,4-tetrahydro-9H-pyrido[4,3-b]indol-2yl, 2,3,-dihydro-1H-pyrrolo[3,4-b]indol-2-yl, 1H-2,3,4,5-tetrahydroazepino[3,4-b]indol-2-yl, 1H-2,3,4,5-tetrahydroazepino[4,3-b]indol-3-yl, 1H-2,3,4,5-tetrahydroazepino[4,5-b]indol-2 yl, 5,6,7,8-tetrahydro[1,7]napthyridinyl, 1,2,3,4-tetrhydro[2,7]naphthyridyl, 2,3-dihydro[1,4]dioxino[2,3-b]pyridyl, 2,3-dihydro[1,4]dioxino[2,3-b]pryidyl, 3,4-dihydro-2H-1-oxa[4,6]diazanaphthalenyl, 4,5,6,7-tetrahydro-3H-imidazo[4,5-c]pyridyl, 6,7-dihydro[5,8]diazanaphthalenyl, 1,2,3,4-tetrahydro[1,5]napthyridinyl, 1,2,3,4-tetrahydro[1,6]napthyridinyl, 1,2,3,4-tetrahydro[1,7]napthyridinyl, 1,2,3,4-tetrahydro[1,8]napthyridinyl, 1,2,3,4-tetrahydro[2,6]napthyridinyl, and the like, in which the bond to the parent moiety is through a non-aromatic carbon atom.
- “Fused heterocyclylheteroaryl” means a radical derived from a fused heteroaryl and heterocyclyl as defined herein, by removal of a hydrogen atom from the heteroaryl portion. Representative fused heterocyclylheteroaryl are as described herein for fused heteroarylheterocyclyl, except that the bond to the parent moiety is through an aromatic carbon atom.
- “Aralkynyl” means an aryl-alkynylene- group wherein aryl and alkynylene are defined herein. Representative aralkynyl groups include phenylacetylenyl and 3-phenylbut-2-ynyl.
- “Aryldiazo” means an aryl-N═N- group wherein aryl is defined herein. Representative aryldiazo groups include phenyldiazo and naphthyldiazo.
- “Arylcarbamoyl” means an aryl-NHCO- group, wherein aryl is defined herein.
- “Benzyl” means a phenyl-CH 2- group. Substituted benzyl means a benzyl group in which the phenyl ring is substituted with one or more ring system substituents. Representative benzyl include 4-bromobenzyl, 4-methoxybenzyl, 2,4-dimethoxybenzyl, and the like.
- “Carbamoyl” means a group of formula Y 1Y2NCO— wherein Y1 and Y2 are defined herein. Representative carbamoyl groups include carbamyl (H2NCO—), dimethylaminocarbamoyl (Me2NCO—), and the like.
- “Carboxy” and “carboxyl” mean a HO(O)C— group (i.e. a carboxylic acid).
- “Carboxyalkyl” means a HO(O)C-alkylene- group wherein alkylene is defined herein. Representative carboxyalkyls include carboxymethyl and carboxyethyl.
- “Cycloalkyloxy” means a cycloalkyl-O— group wherein cycloalkyl is as defined herein. Representative cycloalkyloxy groups include cyclopentyloxy, cyclohexyloxy, and the like.
- “Diazo” means a bivalent —N═N— radical.
- “Ethylenyl” means a —CH═CH— group.
- “Halo” or “halogen” mean fluoro, chloro, bromo, or iodo.
- “Heteroaralkenyl” means a heteroaryl-alkenylene- group wherein heteroaryl and alkenylene are as defined herein. Preferred heteroaralkenyls contain a lower alkenylene moiety. Representative heteroaralkenyl groups include 4-pyridylvinyl, thienylethenyl, pyridylethenyl, imidazolylethenyl, pyrazinylethenyl, and the like.
- “Heteroaralkyl” means a heteroaryl-alkylene- group wherein heteroaryl and alkylene are as defined herein. Preferred heteroaralkyls contain a lower alkylene group. Representative heteroaralkyl groups include thienylmethyl, pyridylmethyl, imidazolylmethyl, pyrazinylmethyl, and the like.
- “Heteroaralkyloxy” means an heteroaralkyl-O— group wherein heteroaralkyl is as defined herein. A representative heteroaralkyloxy group is 4-pyridylmethyloxy.
- “Heteroaralkyloxyalkenyl” means a heteroaralkyl-O-alkenylene- group wherein heteroaralkyl and alkenylene are as defined herein. A representative heteroaralkyloxyalkenyl group is 4-pyridylmethyloxyallyl.
- “Heteroaralkyloxyalkyl” means a heteroaralkyl-O-alkylene- group wherein heteroaralkyl and alkylene are as defined herein. A representative heteroaralkyloxy group is 4-pyridylmethyloxyethyl.
- “Heteroaralkynyl” means an heteroaryl-alkynylene- group wherein heteroaryl and alkynylene are as defined herein. Preferred heteroaralkynyls contain a lower alkynylene moiety. Representative heteroaralkynyl groups include pyrid-3-ylacetylenyl, quinolin-3-ylacetylenyl, 4-pyridylethynyl, and the like.
- “Heteroaroyl” means an means a heteroaryl-CO— group wherein heteroaryl is as defined herein. Representative heteroaroyl groups include thiophenoyl, nicotinoyl, pyrrol-2-ylcarbonyl, pyridinoyl, and the like.
- “Heteroaryldiazo” means an heteroaryl-N═N— group wherein heteroaryl is as defined herein.
- “Heteroarylsulphonylcarbamoyl” means a heteroaryl-SO 2-NH-CO— group wherein heteroaryl is as defined herein.
- “Heterocyclylalkyl” means a heterocyclyl-alkylene- group wherein heterocyclyl and alkylene are as defined herein. Preferred heterocyclylalkyls contain a lower alkylene moiety. A representative heteroaralkyl group is tetrahydropyranylmethyl.
- “Heterocyclylalkyloxyalkyl” means a heterocyclylalkyl-O-alkylene group wherein heterocyclylalkyl and alkylene are as defined herein. A representative heterocyclylalkyloxyalkyl group is tetrahydropyranylmethyloxymethyl.
- “Heterocyclyloxy” means a heterocyclyl-O— group wherein heterocyclyl is as defined herein. Representative heterocyclyloxy groups include quinuclidyloxy, pentamethylenesulfideoxy, tetrahydropyranyloxy, tetrahydrothiophenyloxy, pyrrolidinyloxy, tetrahydrofuranyloxy, 7-oxabicyclo[2.2.1]heptanyloxy, hydroxytetrahydropyranyloxy, hydroxy-7-oxabicyclo[2.2.1]heptanyloxy, and the like.
- “Hydroxyalkyl” means an alkyl group as defined herein substituted with one or more hydroxy groups. Preferred hydroxyalkyls contain lower alkyl. Representative hydroxyalkyl groups include hydroxymethyl and 2-hydroxyethyl.
-
- group.
- “Oxo” means a group of formula >C═O (i.e., a carbonyl group).
- “Phenoxy” means a phenyl-O— group wherein the phenyl ring is optionally substituted with one or more ring system substituents as defined herein.
- “Phenylene” means a —phenyl— group wherein the phenyl ring is optionally substituted with one or more ring system substituents as defined herein.
- “Phenylthio” means a phenyl-S— group wherein the phenyl ring is optionally substituted with one or more ring system substituents as defined herein.
- “Pyridyloxy” means a pyridyl-O— group wherein the pyridyl ring is optionally substituted with one or more ring system substituents as defined herein.
- “Ring system substituents” mean substituents attached to aromatic or non-aromatic ring systems inclusive of hydrogen, alkyl, aryl, heteroaryl, aralkyl, aralkenyl, aralkynyl, heteroaralkyl, heteroaralkenyl, heteroaralkynyl, hydroxy, hydroxyalkyl, alkoxy, aryloxy, aralkoxy, acyl, aroyl, halo, nitro, cyano, carboxy, alkoxycarbonyl, aryloxycarbonyl, aralkoxycarbonyl, alkylsulfonyl, arylsulfonyl, heteroarylsulfonyl, alkylsulfinyl, arylsulfinyl, heteroarylsulfinyl, alkylthio, arylthio, nitrile, NO 2, heteroarylthio, aralkylthio, heteroaralkylthio, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclenyl, aryldiazo, heteroaryldiazo, amidino, Y1Y2N—, Y1Y2N-alkyl—, Y1Y2NCO— or Y1Y2NSO2—, wherein Y1 and Y2 are independently hydrogen, alkyl, aryl, and aralkyl, or where the substituent is Y1Y2N— or Y1Y2N-alkyl- then one of Y1 and Y2 is acyl or aroyl and the other of Y1 and Y2 is hydrogen, alkyl, aryl, and aralkyl. When a ring system is saturated or partially saturated, the “ring system substituent” further comprises methylene (H2C═), oxo (O═) and thioxo (S═). Preferred ring system substituents are hydrogen, CF3, fluoro, alkyl, alkoxy, nitrile or NO2.
- “Sulfamoyl” means a group of formula Y 1Y2NSO2— wherein Y1 and Y2 are defined herein. Representative sulfamoyl groups are sulfamoyl (H2NSO2—) and dimethylsulfamoyl (Me2NSO2—).
- A process for the preparation of aldehydes and ketones according to this invention is outlined in Scheme 1 wherein R a and Rb independently represent any aliphatic or aromatic group amenable to the solvents and reagents utilized in the processes described herein. The groups Ra and Rb may be further substituted and may contain functional groups suitable for further chemical transformations while attached to the hydroxylamine resin. Such functional groups may be suitable protected to prevent interference with the reactions described below. For a comprehensive treatise on the protection and deprotection of common functional groups see T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991), incorporated herein by reference. Rc represents any aliphatic or aromatic group suitable for use as an organometallic reagent.
- According to the foregoing Scheme 1, a polymeric hydroxylamine resin compound 1 is coupled with a carboxylic acid derivative of formula R aCO2H to form the polymeric hydroxamic acid resin compound 2. The coupling reaction is accomplished in the presence of an activating agent as is known in the art of peptide synthesis. Representative activating agents include isopropyl chloroformate, diisopropylcarbodiimide (DIC), 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide (EDC), 1-hydroxybenzotriazole (HOBT), bis(2-oxo-3-oxazolidinyl)-phosphonic chloride (BOP-Cl), benzotriazole-1-yloxy-tris((dimethylamino)phosphonium)hexafluorophosphate (BOP), benzotriazole-1-yloxy-tris-pyrrolidino-phosphonium hexafluorophosphate (PyBROP), bromo-tris-pyrrolidino-phosphonium hexafluorophosphate (PyBOP), 2-(1H-benzotriazole-1-yl)-1.1.3.3-tetramethyluronium tetrafluoroborate (TBTU), 2-(1H-benzotriazole-1-yl)-1.1.3.3-tetramethyluronium hexafluoroborate (HBTU), 2-[2-oxo-1-(2H)-pyridyl]-1,1,3,3-bispentamethyleneuronoium tetrafluoroborate (TOPPipU), N,N′-dicyclohexylcarbodiimide (DCC), and the like. Suitable solvents for the coupling reaction include dichloromethane, DMF, DMSO, THF, and the like. Coupling times range from about 2 to about 24 hours, depending upon the resin and carboxylic acid derivative to be coupled, activating agent, solvent and temperature. The coupling is accomplished at from about −10° C. to about 50° C., preferably at about ambient temperature.
- The coupling reaction is preferably accomplished at ambient temperature in DMF using 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride over about 12 hours.
- The polymeric hydroxaric acid resin compound 2 is then alkylated with an alkylating agent of formula R bLG, where LG is a leaving group, in the presence of a non-nucleophilic base such as 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) in an inert organic solvent such as toluene to form the N-alkylated polymeric hydroxamic acid resin compound 3. The alkylating agent RbLG may be added in an equimolar amount to an excess of to about 25 molar equivalents. About 15 molar equivalents is preferred. The non-nucleophilic base may be added in an equimolar amount to an excess of to about 10 molar equivalents. About 5 molar equivalents is preferred. The leaving group LG is any group amenable to nucleophilic displacement by the nitrogen atom of the polymeric hydroxamic acid resin compound 2 under the reaction conditions described above. A preferred leaving group is halogen. A sample of the N-alkylated polymeric hydroxamic acid resin compound 3 may be subjected to acidolysis to cleave the substituted hydroxamic acid to confirm that the reaction proceeded satisfactorily.
- Reaction of the polymeric N-alkylated hydroxamic acid resin compound 3 with an organometallic reagent of formula R cM, wherein Rc is an aliphatic or aromatic anion and M is a metal cation, followed by acid hydrolysis provides the ketone 4. Preferred organometallic reagents are organolithium reagents of formula RcLi and Grignard reagents of formula RcMgX wherein X is halogen. In a preferred preparation of ketones according to this aspect of the invention, the polymeric N-alkylated hydroxamic acid resin compound 3 is treated with RcMgX in diethyl ether at ambient temperature over about 18 hours, and the reaction mixture is then quenched by addition of aqueous HCl or aqueous KHSO4 to liberate the ketone 4.
- Aldehydes are prepared by treatment of the polymeric N-alkylated hydroxamic acid resin compound 3 with a hydride reducing agent, followed by acid hydrolysis as shown in Scheme 1 above. Representative hydride reducing agents include LiAlH 4, (iso-Bu)2AlH, LiAlH(O-t-Bu)3, LiAlH4-EtOH, LiAlH4-MeOH, and the like. Preferred reducing agents are LiAlH4 and LiAlH4-MeOH. The acid hydrolysis is preferably accomplished aqueous KHSO4.
- As shown in Scheme 1, the N-alkylated polymeric hydroxamic acid resin compound 3 is a Weinreb-like amide useful for the synthesis of aldehydes and ketones (S. Nahm and S. Weinreb, Tet Lett. 1981, 22, 3815-3818). This N-alkylated polymeric hydroxamic acid resin compound has advantages over the previous examples of resin bound Weinreb-like amides (See Fehrentz et al., Tet. Lett., 1995, 36, 7871-7874 and Dinh et al., Tet. Lett., 1996, 37, 1161-1164) in that it can be N-alkylated with bulky lipophilic groups such as benzyl, substituted benzyl, naphthyl or any alkyl group necessary to optimize the reaction on the solid phase. The N-benzyl-O-methylpolystyrenyl moiety, for example, is well suited to form a stable metal chelated intermediate. The lipophilic benzyl group is believed to help shield the chelate adding to its stability.
-
- As shown in Scheme 2 above, the polymeric hydroxylamine resin compound is protected with an amine protecting group to form the N-protected polymeric hydroxylamine resin compound 6. The N-protected polymeric hydroxylamine resin compound 6 is then alkylated as described in Scheme 1 above to form the N-alkylated N-protected polymeric hydroxylamine resin compound 7. Removal of the amine protecting group provides the mono N-alkylated polymeric hydroxylamine resin compound 8. Coupling of 8 with a carboxylic acid compound of formula R aCO2H as described above provides the polymeric N-alkylated hydroxamic acid resin compound 3, which is converted to ketone 4 or aldehyde 5 as described in Scheme 1 above.
- Preferred amine protecting groups “P” include allyloxycarbonyl (Aloc), benzyloxycarbonyl (Cbz), p-methoxybenzyloxycarbonyl (Moz), p-nitrobenzyloxycarbonyl (4-NO 2-Z), trimethylsilylethoxycarbonyl (Teoc), 2,4-dimethoxybenzyloxycarbonyl, o-nitrobenzyloxycarbonyl, o-nitrobenzylsulfonyl (o-Nbs), p-nitrobenzylsulfonyl (p-Nbs), and 2-nitro-4-trifluoromethylbenzenesulfonyl.
- The most preferred amine protecting group is allyloxycarbonyl.
- In a preferred aspect of the processes described in Schemes 1 and 2 above, R a represents the residual, non-carboxyl portion of a natural or unnatural amino acid or peptide. Accordingly, the foregoing processes present a facile route to the heretofore difficult to obtain amino acid or peptide aldehyde compounds.
- In a process for preparing amino acid aldehyde or peptide amino acids according to this invention, the N-terminal nitrogen atom of the amino acid or peptide starting material is preferably protected with a suitable amine protecting group, designated herein as P″. Furthermore, any functional groups contained in the amino acid or peptide side chain(s) may be suitably protected to prevent interference with the reactions described herein.
- In a preferred aspect of the preparation of amino acid or peptide aldehydes described above, R b is benzyl or substituted benzyl.
- In a more preferred aspect of the preparation of amino acid or peptide aldehydes described above, R b is benzyl or benzyl substituted with halogen, haloalkyl or alkoxy and P″ is t-butyloxycarbonyl (BOC).
- In addition, the N-alkylated hydroxamic acid resin compound 3 in which R a is the residual non-carboxyl portion of a natural amino acid or peptide are amino acid or peptide aldehyde equivalents which may be stored and used to generate the corresponding amino acid or peptide aldehyde as needed by treatment with a hydride reducing agent and acid hydrolysis as described above.
- Preferred polymeric N-protected hydroxylamine resin compounds include N-allyloxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- N-allyloxycarbonyl-4-[4-(O-methylhydroxylamine)-3-methoxyphenoxy]-(N-4-methylbenzhydryl)butyramide-copoly(styrene-1%-divinylbenzene)-resin,
- N-allyloxycarbonyl-4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-phenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- N-allyloxycarbonyl-4-[4-(1-aminoxyethyl)-2-methoxy-5-nitrophenoxy]-(N-4-methylbenzhydryl)butyramide-copoly(styrene-1% divinylbenzene) resin,
- N-allyloxycarbonyl-O-hydroxylamine-2′-chlorotrityl-copolystyrene-1%-divinylbenzene-resin,
- N-allyloxycarbonyl-O-hydroxylamine-trityl-copolystyrene-1%-divinylbenzene-resin,
- N-allyloxycarbonyl-5-(4-O-methylhydroxylamine-3,5-dimethoxyphenoxy)-valeric acid-copolystyrene-1%-divinyl benzene resin,
- N-allyloxycarbonyl4-O-methylhydroxyladine-3-methoxyphenoxy-copolystyrene-1%-divinyl benzene resin,
- N-allyloxycarbonyl4-(O-methylhydroxylamine)-2,3,5,6-tetrafluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- N-allyloxycarbonyl4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-2,3,5,6-tetrafluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin and
- N-allyloxycarbonyl-3-hydroxy-xanthydrolamine-copolystryene-1%-divinylbenzene resin.
- The most preferred polymeric N-protected hydroxylamine resin compound is N-allyloxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin.
- A process for the preparation of amines according to this invention is outlined in Scheme 3. In Scheme 3, R d and Re independently represent H or any aliphatic or aromatic group amenable to the solvents and reagents utilized in the processes described herein, provided that Rd and Re are not both H. The groups Ra, Rb and Rc may be further substituted and may contain functional groups suitable for further chemical transformations while attached to the hydroxylamine resin. It is understood that when these functional groups possess reactivity such that they could potentially interfere with the reactions described below, such functional groups should be suitably protected. For a comprehensive treatise on the protection and deprotection of common functional groups see T. H. Greene and P. G. M. Wuts, Protective Groups in Organic Synthesis, 2nd edition, John Wiley & Sons, New York (1991), incorporated herein by reference. Rf represents any aliphatic or aromatic group which is amenable for use as an organometallic reagent.
- According to the foregoing Scheme 3, reaction of the polymeric hydroxylamine resin compound 1 with an aldehyde or ketone 9 provides the polymeric oxime ether resin compound 10. Oxime formation is preferably accomplished at about ambient temperature by swelling the polymeric hydroxylamine resin compound 1 in a suitable inert organic solvent such as dichloromethane, followed by addition of an excess of aldehyde or ketone. Reductive cleavage of the resin, for example by reaction with NaCNBH 3, or BH3THF, followed by LiAlH4 provides the amine 11. Reaction of the polymeric oxime ether resin compound 10 with an organometallic reagent of formula RfM, wherein Rf is an aliphatic or aromatic anion and M is a metal cation as defined herein, provides the polymeric (x-substituted hydroxylamine resin compound 12. Cleavage of the (α-amine 13 from the resin, is accomplished, for example, using BH3THF or LiAlH4. See Y. Ukaji et al., Chem. Lett., 173, (1991) and R. P. Dieter et al., Can. J. Chem. 71, 814 (1993). Preferred metal cations are Li and MgX wherein X is halogen. With the aid of a chiral auxiliary such as a chiral benzyl hydroxyl amine linker, chiral α-substituted amines will result.
-
- O. As shown in the foregoing Scheme 4, the polymeric hydroxylamine resin compound 1 is reacted with the α,β unsaturated carboxylic acid ester compound 14 to form the polymeric oximyl resin compound 15. Radical cyclization of 15, for example by heating in the presence of 2,2′-azobisisobutyronitrile (AIBN) and thiophenol in an inert organic solvent such as benzene results in formation of the polymeric g-lactone resin compound 16. Acid hydrolysis of 16, using, for example 10% aqueous HCl, provides the lactone 17. See O. Miyata et al., Tet. Lett., 37, 229-232, (1996).
- A process for the preparation of carbocyclic or heterocylic compounds by radical cyclization is shown in Scheme 5. In Scheme 5, R j, Rk and Rl are aliphatic or aryl as defined herein. The methodology described in Scheme 1 is applicable to the preparation of 5-, 6- or 7-membered rings. Carbocycles result when the phenolic oxygen atom is replaced with a carbon atom.
- According to the foregoing Scheme 5, the polymeric hydroxylamine resin compound 1 is reacted with the acetophenone compound 18 and a bromoalkene compound or o-bromobenzyl compound to form the polymeric acetophenone oxime compounds 19 or 23. Radical cyclization of 19 or 23, for example by heating in the presence of AIBN and tri-n-butyltin hydride in an inert organic solvent such as benzene results in formation of the polymeric N-cyclyl hydroxylamine resin compounds 20 or 24. Treatment of 20 or 24 with acid, preferably trifluoroacetic acid, results in formation of the cyclic hydroxamic acid compounds 21 or 25. Reductive cleavage of 20 or 24 for example using LiAlH 4 as described in Scheme 3 above, results in formation of the cyclic amine compounds 22 or 26. See S. E. Booth et al., J. Chem. Soc. Commun., 1248-1249, (1991).
-
- wherein Ar, A 2, R9, R10, R11, R12 and n are defined herein, are disclosed in WO 97/24117, incorporated herein by reference. Compounds of formula 29 inhibit the production or physiological effects of tumor necrosis factor (TNF) and are useful in treating a patient suffering from a pathological condition such as inflammation or autoimmune disease characterized by a physiologically detrimental excess of TNF.
-
- i) 3-(4-methyoxyphenylsulfonyl) propionic acid (5 equiv.); 1-(3-dimethylaminopropyl)-3-ethyl carbodiimide hydrochloride (EDCI 5 equiv.); DMF; 25° C.; 12 hours.
- ii) 50% TFA in CH 2Cl2 (100 equiv.); 30 minutes.
- According to the foregoing Scheme 6, the carboxylic acid compound 27 is coupled to the polymeric hydroxylamine resin compound 1 as described in Scheme 1 above to form the polymeric hydroxamic acid resin compound 28. The polymeric hydroxamic acid resin compound 28 is then treated with an acid such as trifluoroacetic acid (TFA) in an inert solvent such as dichloromethane to liberate the hydroxamic acid compound 29. A higher percentage of TFA (trifluoroacetic acid) and longer reaction times are needed to cleave the hydroxamic acid from the Wang version compared to the Rink version of the resin. During the evaporation of the TFA in the work-up to isolate the hydroxamic acid, it is found that heating the sample during concentration would generate a significant amount of the N,O-diacylated dimer of the parent hydroxamic acid as a side-product. To minimize this side reaction the reaction mixture is concentrated at or below room temperature with toluene used as an azeotrope.
- A process for the preparation of a polymeric α,β-unsaturated alkenoate resin compound 54 according to this invention is outlined in Scheme 7. In Scheme 7, R m is H or aliphatic, Rn is aliphatic or aromatic, and R20 and R21 are alkyl. Rm and Rn may contain additional functional groups. It is understood that these functional groups may be suitably protected to prevent interference with the reactions described below.
- According to the foregoing Scheme 7, coupling of the polymeric hydroxy resin 30 with the phosphono acetic acid compound 51 provides the polymeric phosphonoacetoxy resin compound 31. The coupling is preferably accomplished using a preformed symmetric anhydride (method i below), or using the 2,6-dichlorobenzoic acid anhydride described by Sieber, P., Tetrahedron Lett., 1987, 28, 6147-6150 (method ii below).
- i) 51 (6 equiv.); diisopropylcarbodimide (3 equiv.); dichloromethane; 0° C. 30 minutes, then 8, 4-dimethylaminopyridine (0.2 equiv.); 12 hours.
- ii) 51 (3 equiv.); 2,6-dichlorobenzoyl chloride (3 equiv.); pyridine (6 equiv.); DMF; 12 hours.
- The Horner-Emmons condensation of the polymeric phosphonoacetoxy resin compound 31 with the aldehyde R.CHO is then accomplished by treating 31 with an excess of a base such as potassium tert-butoxide, potassium bis(trimethylsilyl)amide or lithium bis(trimethylsilyl)amide in an organic solvent such as THF or toluene at about 0° C. to about 25° C. The mixture is stirred or shaken for a sufficient amount of time to quantitatively generate the resin-bound anion, generally from about 15 minutes to about 2 hours. The aldehyde R nCHO is then added and the mixture is stirred for up to three days to generate the polymeric alkenoate resin compound 32.
- In an especially preferred preparation of the polymeric alkenoate resin compound 32, the polymeric phosphonoacetoxy resin compound 31 is treated with an excess of a base such as potassium tert-butoxide or lithium bis(trimethylsilyl)amide in an organic solvent such as THF at about 0° C. to about 25° C. The mixture is stirred or shaken for a sufficient amount of time to quantitatively generate the resin-bound anion, generally from about 15 minutes to about 2 hours. The solvent and excess base are then removed from the reaction vessel and a solution of the aldehyde in a less polar solvent mixture, comprising the solvent used in the generation of the resin-bound anion and a second, less polar solvent, is added at ambient temperature and the mixture is stirred for up to three days to generate the polymeric alkeneoate resin compound 32.
- Preferred less polar solvents are alkanes such as pentane, hexane or heptane, or cycloalkanes such as cyclohexane, cyclopentane or cycloheptane. An especially preferred less polar solvent mixture is 60% cyclohexane-THF.
- Use of the less polar solvent mixture in the Horner-Emmons condensation as described above presents a number of advantages over generation of the anion and condensation with the aldehyde using strong base in a polar solvent. A strong base is required to quantitatively generate the resin-bound anion. However, under the reaction conditions of strong base and a relatively polar solvent, the resin linkage was hydrolyzed resulting in a low yield of the polymeric alkeneoate resin compound 32. However, draining the solvent and excess base following essentially quantitative generation of the resin-bound anion and adding a solution of the aldehyde R nCHO in a less polar solvent mixture appears to stabilize the resin linkage toward hydrolysis and thereby results in unexpectedly high yields of the polymeric alkeneoate resin compound 32.
- The polymeric alkeneoate resin compound 32 may be used for further transformations as described in Scheme 8, or the α,β-unsaturated acid compound 54 may be cleaved from the resin using methods commonly known in the art, for example by treating a mixture of the polymeric alkeneoate resin compound 53 in a suitable organic solvent such as dichloromethane, dichloroethane or dioxane, with acid. Cleavage is preferably accomplished at about ambient temperature using a trifluoroacetic acid (TFA)-dichloromethane solvent mixture over about 1 hour.
-
- The polymeric diethylphosphonoacetoxy-resin compound 31 is treated with a base such as potassium bis (trimethylsilyl) amide in an inert solvent such as toluene, at a temperature of about 0° C., followed by an aldehyde of formula R 11CHO wherein R11 is as defined above, at about ambient temperature to give the polymeric alkenoate resin compound 32.
- According to the foregoing Scheme 8, reaction of the polymeric alkenoate resin compound 32a, prepared as described in Scheme 7, with a thiol of formula Ar-A 2-SH, wherein Ar and A2 are as defined above, provides the polymeric alkanoate resin compound 33. The addition may be conveniently carried out under mild basic conditions, for example in the presence of lithium hydroxide at about ambient temperature.
- The polymeric alkanoate resin compound 33 may then be hydrolytically cleaved by treatment with acid as described in Scheme 7, above, to prepare the carboxylic acid compound 27 wherein n is 0.
- Alternatively, the polymeric alkanoate resin compound 33 may be treated with an oxidizing agent such as m-chloro-perbenzoic acid in an inert solvent such as dioxane at about ambient temperature to give the polymeric sulfoxide (n=1) or sulfone (n=2) resin compound 34. Acid hydrolysis of 34 as described in Scheme 7,above, provides the carboxylic acid compound 35.
-
- According to the foregoing Scheme 9a, a polymeric hydroxy resin compound 30 is converted to the polymeric N-hydroxylphthalimido resin compound 36 by coupling with N-hydroxyphthalimide under Mitsunobu conditions (Mitsunobu, O., Synthesis 1981, 1), by conversion of the hydroxy group to a leaving group such as the mesylate followed by nucleophilic displacement, or by reaction of the polymeric hydroxy resin compound with N-hydroxyphthalimide in the presence of an acid such as benzenesulfonic acid. Removal of the phthalimido group provides the polymeric hydroxylamine resin compound 1.
- For example, when 30 is 4-(hydroxymethyl)phenoxymethyl-copoly(styrene-1%-divinylbenzene)resin (Wang resin), N-hydroxyphthalimide is coupled to the resin in the presence of diisopropylazodicarboxylate and triphenylphosphine in DMF. The phthalimido protection is removed by methylaminolysis in THF at 40° C. The reaction is complete in about 2 hours. The use of the methylamine to cleave the phthalimide protection offers a significant advantage over the commonly used hydrazinolysis procedure (Wolf et al., Can. J. Chem., 1970, 48, 3572.
- When 4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (Rink resin) is utilized, 1 is preferably prepared by reaction of the polymeric hydroxy resin compound with N-Hydroxy phthalirnide in DMF in the presence of catalytic benzene sulfonic acid to form the polymeric N-hydroxyphthalimido resin compound 36. The phthalimido protecting group is then removed by reaction with hydrazine hydrate in tert-butanol at about 60° C. to give the corresponding polymeric hydroxylamine resin compound.
-
- According to the foregoing Scheme 9, a polymeric hydroxy resin compound 30 is coupled with a N,N-diprotected hydroxylamine compound 37, wherein P and P′ are amine protecting groups, as described in Scheme 8 above to form the polymeric N,N-diprotected hydroxylamine resin compound 38. The amine protecting group P′ is then selectively removed to form the polymeric N-protected hydroxylamine resin compound 6.
- In a preferred embodiment of the synthesis described in Scheme 9, P is benzyl and P′ is allyloxycarbonyl. Selective removal of the allyloxycarbonyl protecting group is effected by treatment with tetrakis(triphenylphosphine)Palladium(0).
- The N,N-diprotected hydroxylamine compound 37 is prepared by sequential introduction of the protecting groups P and P′ to an O-protected hydroxylamine compound of formula H 2NOP2 wherein P2 is a hydroxy protecting group. A preferred hydroxy protecting group is alkyl. The amine protecting groups P and P′ are then introduced using reagents and reaction conditions well known in the art of organic synthesis. For Example, reaction of O-tert-butylhydroxylamine with allyloxychloroformate results in formation of N-allyloxycarbonyl-O-tert-butylhydroxylamine, which is then reacted with benzyl bromide to form N-benzyl-N-allyloxycarbonyl-O-tert-butylhydroxylamine. Treatment of N-benzyl-N-allyloxycarbonyl-O-tert-butylhydroxylamine with trifluoroacetic acid gives N-benzyl-N-allyloxycarbonylhydroxylamine.
-
- According to the foregoing Scheme 10, a polymeric chloromethyl resin compound such as chloromethyl polystyrene (39, Merrifield resin) is reacted with 4-hydroxy-2-fluoroacetophenone in the presence of base to form the 4-(1-hydroxylethyl)-2-fluorophenoxymethyl resin compound 40. Reduction of the ketone group, for example using lithium borohydride in THF, provides the 4-(1-hydroxyethyl-2-fluorophenoxymethyl resin compound 41. Conversion of 41 to the hydroxyphthalimido resin compound 42, followed by removal of the phthalimido group as described in Scheme 8 above, provides the 4-(methyl-O-methylhydroxylamine)-2-fluorophenoxymethyl -copoly(styrene-1% divinylbenzene) resin compound 43.
-
- According to Scheme 10a, a polymeric chloromethyl resin of compound such as chloromethyl polystyrene (39, Merrifield resin) is reacted with Methyl-2-fluoro-4-hydroxybenzoate in the presence of base to form the 4-(methylformate)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin, compound 40a. Reduction of the ester group, for example with lithium aluminum hydride in THF, provided the 4-(hydroxymethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin, compound 41a. Conversion of this to the hydroxylphthalinido resin compound 42a, followed by removal of the phthalimido group as described in Scheme 8 above, provides the 4-(O-methylhydroxylamine))-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin, compound 43a.
-
- According to the foregoing Scheme 11, a polymeric chloromethyl resin compound such as chloromethyl polystyrene (39, Merrifield resin) is reacted with 4-hydroxy-2,3,5,6-tetrafluorobenzoic acid in the presence of base to form the 4-carboxy-2,3,5,6-tetrafluorophenoxymethyl resin compound 44. Reduction of the carboxylic acid group, for example using LiAlH 4, diisobutylaluminum hydride, or BH3-THF provides the 4-hydroxymethyl-2,3,5,6-tetrafluorophenoxymethyl resin compound 45. Conversion of 45 to the hydroxyphthalimido resin compound 46, followed by removal of the phthalimido group as described in Scheme 8 above provides the 4-(O-methylhydroxylamine)-2,3,5,6-tetrafluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin compound 47.
-
- According to the foregoing Scheme 12, a polymeric chloromethyl resin compound is reacted with 4-phenoxy-2,3-5,6-tetrafluorophenyl 2,4-dimethoxyphenyl ketone 48 in the presence of base as described in Scheme 11 above to form the 4-(2′,4′-dimethoxyphenylcarbonyl)-2,3,5,6-tetrafluorophenoxymethyl-resin compound 49. Reduction of the carbonyl, for example using LiBH 4, provides the 4-(hydroxymethyl-2′,4′-dimethoxyphenyl)-2,3,5,6-tetrafluorophenoxymethyl resin compound 50. Conversion of 50 to the hydroxyphthalimido resin compound 51, followed by removal of the phthalimido group as described in Scheme 8 above provides the 4-(2′,4′-dimethoxyphenyl-0-methylhydroxylamine)-2,3,5,6-tetrafluorophenoxymethyl- resin compound 52.
- Preferred polymeric hydroxylamine resin compounds have formula 1 wherein L is a linking group.
-
- wherein
- A is absent or a group of formula —X 1-Z— wherein
- X 1 is —CHR— or —CHR-Y-CO-(CH2)n— wherein R is H, alkyl, phenyl, or phenyl substituted with —H, alkyl, alkoxy, halogen, nitrile or —NO2,
- Y is —O— or —NH—,
- n is an integer from 1 to 6, and
- Z is —O— or —NH—;
- R 1, R1a, R2, and R2a are independently ring system substituents; and
- R 3 and R4 are independently —H, alkyl, phenyl, or phenyl substituted with one or more substituents selected from alkyl, alkoxy, halogen nitrile and —NO2;
-
- wherein
- R 1′ is —H, alkyl, alkoxy, halogen, nitrile or —NO2; and
- R 6, R7 and R8 are independently selected from —H, alkyl, alkoxy, halogen, nitrile and —NO2.
-
- wherein
- R 1 and R2 are independently H or F;
- R 1a and R2a are independently ring system substituents; and
- one of R 3 and R4 is H and the other is H or 2,4-dimethoxyphenyl.
-
-
-
-
-
-
-
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-
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-
-
-
-
-
- The most preferred polymeric hydroxylamine resin compounds are
- 4-(O-methylhydroxylamine)-2,3,5,6-tetrafluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-2,3,5,6-tetrafluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(1-methyl-1-one-)-3-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(1-methyl-1-hydroxylamine)-2-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(1-methyl-1-hydroxy-)-3-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(carboxy)-3-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin,
- 4-(carboxyaldehyde)-3-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin, and 4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-phenoxymethyl-copoly(styrene-1% divinylbenzene) resin.
- The Rink handle (H. Rink, Tet. Lett., 28, 3787-3790, 1987) has the advantage of being cleaved under mild acidolysis for short periods of time (i.e. 10% TFA in DCM for 10-15 minutes.). However, due to the cost of the resin it is desirable to synthesize the corresponding functional resin on the Wang solid support ((a) S. S. Wang, J. Am. Chem. Soc., 1973, 95, 1328. b) Lu et al., J. Org. Chem., 1981, 46, 3433).
- The polymeric hydroxylamine resin compounds in which R 1a and R1b are F are especially useful as it lends itself to ready quantification of resin loading and monitoring of reactions conducted on the resin using fluorine NMR.
- The methods described herein are also useful for the preparation of peptide aldehydes, ketones and hydroxamic acids. In general, this method involves coupling the carboxyl group of a suitably N-protected first amino acid to the resin to form the polymeric N-protected amino acid hydroxamic acid resin compound. The amino acid N-protecting group is then removed and the unprotected polymeric amino acid hydroxamic acid resin compound is coupled with a second suitably N-protected amino acid. This process is then repeated until the desired amino acid residues have been incorporated in the peptide.
- Alternatively, peptides comprising multiple amino acids are prepared by coupling a suitably N-protected peptide subunit comprising two or more amino acids to form the polymeric N-protected peptide hydroxamic acid resin compound. The amino acid N-protecting group is then removed and the unprotected polymeric peptide hydroxamic acid resin compound is coupled with a second suitably N-protected amino acid or peptide. Thus, in addition to the sequential addition of individual amino acid subunits described above, a polypeptide may be prepared by coupling of peptide subunits.
- Once the desired amino acids have been incorporated into the peptide, the polymeric peptide hydroxamic acid compound is reacted with an organometallic reagent followed by acid hydrolysis to form the peptide ketone compound; reductively cleaved to form the peptide aldehyde compound; or cleaved with acid to form the peptide hydroxamic acid compound. Any remaining protecting groups may be removed prior to or subsequently to cleavage of the peptide from the resin.
- Hydroxamic acid derivatives produced in accordance with the process of this invention are useful, inter alia, as 5-LO (lipoxygenase) inhibitors. See, e.g., A. O. Stewart et al., Structure-Activity Relationships of N-Hydroxyurea 5-Lipoxygenase Inhibitors, J. Med. Chem. 1997, 40. 1955-1968.
- N-protecting groups suitable for use in peptide synthesis as described herein should have the properties of being stable to the conditions of coupling to the polymeric hydroxylamine resin compound while being readily removable without destruction of the growing peptide chain or racemization of any of the chiral centers contained therein. Suitable protecting groups are 9-fluorenylmethyloxycarbonyl (Fmoc), t-butyloxycarbonyl (Boc), benzyloxycarbonyl (Cbz), biphenylisopropyloxycarbonyl, t-amyloxycarbonyl, isobornyloxycarbonyl, (a,a)dimethyl-3,5-dimethoxybenzyloxycarbonyl, o-nitrophenylsulfenyl, 2-cyano-t-butyloxycarbonyl, and the like.
- Additionally, the resins of this invention are useful for constructing arrays of aldehyde, ketone or amine combinatorial libraries or arrays of aldehydes and ketones as reagents in combinatorial library synthesis, for example, reagents for the Ugi 4-component condensation (Ivar Ugi, in Isonitrile Chemistry, 1971, p. 145, Academic Press). The hydroxylamine bound resins may be used not only for single functional group transformations, but also multiple step solid phase synthesis to generate combinatorial libraries.
- The functionalized resins of this invention also are useful for the parallel synthesis of a multiplicity of different aldehyde, ketone or amine end products as outlined for ketone compounds in Schemes 12a and 12b. In Schemes 12a and 12b, R b and Rc are as defined above; n is an integer which represents the total number of different aldehyde, ketone or amine products which are to be prepared; and Ra1-Ran represent, independently, an aliphatic or aromatic group as defined herein.
- The parallel synthesis of a multiplicity of ketone compounds using a multiplicity of carboxylic acid compound R a1CO2H-RanCO2H and a single organometallic compounds RcMgX is shown in Scheme 13a. According to Scheme 13a, the N-alkylated hydroxylamine resin compound 8, prepared as described in Scheme 2, is divided into n portions. Each portion of resin is then coupled with a different carboxylic acid compound to give n portions of polymeric N-alkylated hydroxamic acid resin compound. Each portion of polymeric N-alkylated hydroxamic acid resin compound is then reacted with a Grignard reagent of formula RcX and subjected to acid hydrolysis to give n portions of ketone derived from a single organometallic reagent.
- The parallel synthesis of n different ketone compounds derived from a single carboxylic acid compound R aCO2H and n different organometallic compounds Rc1MgBr to RcnMgBr is outlined in Scheme 13b above. According to Scheme 13b, the polymeric N-alkylated hydroxylamine resin compound is coupled with a carboxylic acid of formula RaCO2H. The resulting polymeric N-alkylated hydroxamic acid resin compound is then divided into n portions, and each portion of polymeric N-alkylated hydroxamic acid resin compound is then reacted with a different Grignard reagent Rc1-RcnMgBr and subjected to acid hydrolysis to give n different ketone compounds derived from a single carboxylic acid compound.
-
- According to the foregoing Scheme 14, the polymeric N-alkylated hydroxylamine resin compound 8 is divided in 4-portions, and each portion is coupled with a different carboxylic acid compound to prepare 4 different polymeric N-alkylated hydroxamic acid resin compounds. The 4 portions of polymeric N-alkylated hydroxamic acid resin compounds are then mixed together to form a single portion which is then divided into 4 portions of polymeric N-alkylated hydroxamic acid resin compounds, in which each portion contains approximately equal amounts of each individual polymeric N-alkylated hydroxamic acid resin compound. Each of the 4 portions is then reacted with a different Grignard reagent R c1-Rc4MgBr and subjected to acid hydrolysis to give 4 portions of ketone compound, each of which contains 4 compounds representing the products of reaction of each of the 4 different polymeric N-alkylated hydroxamic acid resin compounds with a single Grignard reagent. In this manner a combinatorial library containing a multiplicity of ketone compounds may be quickly constructed.
- In a similar manner, a combinatorial library of peptides may be assembled by repeating the dividing-recombining sequence for each amino acid or peptide building block.
- The foregoing may be better understood by reference to the following Examples, which are presented for illustration and not intended to limit the scope of the invention.
-
- Rink acid resin (1 g; 0.63 mmol) is swelled in DMF (10 mL) for 15 minutes at ambient temperature. N-Hydroxyphthalimide (514 mg; 3.15 mmol) is added to the resin suspension followed by benzene sulfonic acid (19 mg; 0.13 mmol). The mixture is stirred by means of a mechanical stirrer and heated to 50° C. for five hours. The mixture is then cooled to ambient temperature and stirred for an additional 12 hours, after which the resin is filtered and washed extensively with DMF (5×25 mL); DMF:H 2O (70:30; 5×25 mL); THF (10×25 mL); and diethyl ether (10×25 mL). The resin is then dried overnight under high vacuum at 40° C. The IR spectrum shows a carbonyl absorbance at 1733 cm−1 corresponding to the phthalimido carbonyl stretch. Elemental analysis: calcd.:0.28% N. Found: 0.26%N. Loading=0.18 mmol/g.
- The resin is swelled in 20 mL of tert-butanol for ten minutes. Hydrazine hydrate (10 mL) is added to the mixture and the reaction is warmed to 60° C. with mechanical stirring for 12 hours, after which the reaction is cooled to ambient temperature. The resin is filtered and washed extensively with DMF (10×25 mL), THF (10×25 mL), and diethyl ether (10×25 mL), then dried under high vacuum at 40° C. overnight. The IR spectrum of the resulting resin shows the loss of the carbonyl stretch at 1733 cm −1 which is present in the starting material. Elemental Analysis: %N found=0.43; 0.42 (corresponding to a loading level of 0.3 mmol/g).
-
- 4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (200 mg) is swelled in DMF (3 mL). To this suspension is added 3-(4-methoxyphenylsulfonyl)propionic acid (610 mg; 2.5 mmol) and 1-(3-dimethylaminopropyl)-3-ethyl carbodiimide hydrochloride (EDCI; 477 mg; 2.5 mmol) at ambient temperature. The reaction mixture is shaken at ambient temperature using a vortex shaker for 12 h, after which the resin is filtered and washed extensively with DMF:H 2O (80:20; 5×5 mL), DMF (5×5 mL), THF (5×5 mL), and diethyl ether (5×5 mL). The resin is dried under high vacuum at 40° C. for 12 hours. The IR spectrum shows a carbonyl absorbance at 1675 cm−1 corresponding to the bound hydroxamate.
- N-hydroxy-3-(4-methoxyphenylsulfonyl)propionamide.
- Dry N-[3-((4-methoxyphenyl)sulfonyl)prop-1-ylcarbonyl]4-(2′,4′-dimethoxyphenyl-O-methylhydroxylamine)-phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (200 mg), prepared as in Example 2, is swelled in 3 mL of methylene chloride for 10 minutes. Trifluoroacetic acid (TFA; 0.3 mL) is added to the mixture dropwise at ambient temperature and the resulting mixture is vortexed for 30 minutes. The resin turned a dark blue upon addition of the TFA. The mixture is then filtered and washed with two 5 mL portions of methylene chloride. The filtrate is evaporated by rotary evaporation to yield 20 mg of crude product. An LC/MS trace of the crude reaction mixture showed it to contain better than 75 area % of the desired product, 3-(4-methoxyphenylsulfonyl)propionic acid is present in 6 area %). 1H NMR (MeOH-d4) δ 2.45 (t,2H); 3.45 (t,2H); 3.90 (s,3H), 7.15 (d, 2H); 7.85 (d, 2H).
-
- A 1-L jacketed reactor with a bottom valve and overhead stirrer (Ace catalog #8090) is charged with Wang resin (18.35 g, 20 meq) and anhydrous tetrahydrofuran (THF, 450 mL). This mixture is stirred gently for about 15 minutes, then as much solvent as possible is removed through a tube fitted with a porous glass frit via vacuum aspiration. Fresh TBIF is added, followed by triphenylphosphine (15.74 g, 60 mmol) and N-Hydroxyphthalimide (16.31 g, 100 mmol). The resulting mixture is stirred and cooled to −5-0° C. Diisopropyl azodicarboxylate (11.8 mL, 60 mmol) is added slowly so as to maintain the temperature at <5° C. When the addition is complete, the stirred mixture is allowed to warm slowly to room temperature and stirred overnight. As much of the reaction liquors as possible is removed by aspiration through the dip tube as above. The resin is washed by charging N,N-dimethylformamide (DMF, 200 mL), stirring the mixture for 3-5 minutes, and then removing by aspiration as much of the wash solution as possible. Similarly, the resin is washed sequentially with an additional portion of DMF and portions of methanol (twice), THF (twice), and methanol (once). A portion of the resin may be removed for analysis: IR 1734 cm −1 (C═O).
- To the resin remaining in the reactor is added THF (400 mL) and 200 mL of a 40% aqueous solution of methylamine (2.31 mol). This reaction mixture is stirred gently at 40° C. for 2 hours, then cooled to room temperature (the mixture may be held overnight at this temperature). As much of the reaction liquor as possible is removed by aspiration, and the resin is washed with the solvent array as above. Following the final methanol wash, additional methanol is used to flush the resin out of the bottom of the reactor and isolate it by filtration. The filtered resin is dried at 40° C. under vacuum. Yield 18-18.5 g resin: amine load 1.02 meq/g (based on potentiometric titration of a THF suspension with p-toluenesulfonic acid); IR (microscopy) 3316 cm −1 (w, —NH2). Analysis found C, 87.07%; H, 7.77%; N, 1.58%, which corresponds to 1.13 nitrogen atoms/g resin.
- Assay: preparation of 4-nitrophenylethanehydroxamic acid.
- A 200 mg sample of the dried resin (ca. 0.2 mmol) is charged to a 5- or 10-mL resin reactor (a polypropylene syringe barrel fitted with a polypropylene frit). The resin is swelled for about 15 minutes in dry DMF, and then 115 mg 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (EDCI, 0.6 mmol) is added. To this mixture is then added 4-nitrophenylacetic acid (115 mg, 0.6 mmol). The reactor is capped and the mixture is agitated slowly overnight (a rocker bed apparatus is used). The reaction liquors are removed by vacuum filtration (the resin reactor is inserted through a small rubber vacuum flask adapter), and the resin is washed with several small (2-3 mL) portions of the following solvents: DMF (4-5 portions), MeOH or 50% aq. DMF (3-4 portions), THF (3-4 portions), and MeOH (2-3 portions). The resin (still in the syringe reactor) is dried for at least 4 hours under vacuum at 40 ° C.
- To this dried resin is added 2 mL dichloromethane followed by 2 mL trifluoroacetic acid (TFA). Additionally, 20 mL water is added (believed to reduce “anhydride” formation from hydroxamic acid product). The mixture is allowed to react for about 1 hr, and the reaction liquors are drained into a tared collector. The resin is washed with 1-2 1-mL portions of dichloromethane followed by 1-2 1-mL portions of toluene. The combined filtrates are concentrated to about 2 mL at 30° C., 2 mL additional toluene is added, and the resulting solution is concentrated to dryness under vacuum (rotary evaporator followed by vacuum oven at 30° C.; note that heating in the presence of TFA promotes formation of the “anhydride” impurity). The residue is weighed and analyzed for weight % purity (HPLC, using the carboxylic acid as a response factor standard). Typical results for 4-nitrophenylethanehydroxamic acid: 29-30 mg solids at 60-70 wt % purity, 90-97 A % purity (261 nm); 1H NMR (CD3OD) δ 8.13 (d, 2H), 7.25 (d, 2H), 4.85 (bs, OH, NH), 3.55 (s, 2H); 13C NMR δ 169.4, 144.3, 131.3, 124.6, 40.2. This reflects a load/clip chemical yield of 50-55% from resin at 1 meq/g.
-
- Dry 4-O-Methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (2 g, 1.5 mmol), prepared as in Example 4, is allowed to swell in DMF (8 mL) for 10 minutes and then is treated with 4-phenyl butyric acid and EDC (0.86 g, 4.5 mmol). The mixture is shaken for 24 hours and filtered. The resin is washed with DMF, DMF/H 2O, DMF, THF and Et2O and dried under vacuum at 40° C. to give N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (2.2 g). IR: C═O 1670 cm−1. Elemental analysis: calcd; N, 1.05%. Found: N, 1.07%.
-
- Dry 4-O-Methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (4 g, 3 mmol), prepared as in Example 4, is allowed to swell in DMF (32 mL) for 10 minutes, then is treated with 4-bromo-3-methylbenzoic acid and EDC (1.725 g, 9 mmol). The mixture is shaken for 24 hours and filtered. The resin is washed with DMF, DMF/H 2O, DMF, THF and Et2O and dried under vacuum at 40° C. to give N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (4.5 g). IR: C═O 1677.5 cm−1. Elemental analysis: calcd: Br, 5.2%; N, 1.05%. Found: Br, 5.3%; N, 0.91%.
- N-Hydroxy-4-bromo-3-methyl benzamide.
- N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin, prepared as in Example 6, is suspended in 50% TFA/CH 2Cl2 for 2 hours. The resin is filtered and washed three times with CH2Cl2 to give N-Hydroxy-4-bromo-3-methyl benzamide. LC MS: m/z 230/232 (Br)[M+H]+ Area=78%; 1H NMR (300 MHz, CDCl3) δ: 2.42 (s, 3H), 7.4 (bd J=7.89, 1H) 7.58 (bd J=7.89 1H), 7.62 (bs, 1H).
-
- N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (1.46 g, 1.095 mmol), prepared as in Example 5, is suspended in toluene (26 mL) for 10 minutes. DBU (0.83 mL; 5.5 mmol) is added and the mixture is agitated for 2 hours on a wrist shaker. Bromobenzyl bromide (4.1 g, 16.425 mmol) is added and the reaction mixture is vigorously agitated for 4 days. The resin is filtered and washed with DMF, DMF/H 2O, DMF, THF and Et2O and dried under vacuum at 40° C. to give N-4-bromobenzyl-N-4-phenylbut-1-ylcarbonyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (1.4 g). IR C═O 1668 cm−1. Elemental Analysis: calcd: Br, 5.3%; N,0.94%. Found: Br, 5.4%; N, 0.85%.
- 4-Phenyl butyraldehyde.
- N-4-bromobenzyl-N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.2 g, 0.6 mmol/g 0.12 mmol) is suspended in diethyl ether for 10 minutes and then cooled to 5° C. in an orbital shaker. The suspension is treated with LiAlH 3OMe (0.46 M in diethyl ether, 0.22 mL, 0.1 mmol) and agitated for 30 minutes at this temperature. The reaction mixture is quenched by the addition of 2 M HCl (aq) and vortexed for 30 minutes. Sodium potassium tartrate is added and the mixture vortexed for a further 10 minutes. Sodium sulfate is added and the mixture is filtered through a plug of silica gel, washing thoroughly with dichloromethane. The filtrate is concentrated to give 4-phenyl butyraldehyde. GC: Area=91%; 1H NMR (CDCl3) δ 9.75 (1H,s), 7.05-7.30 (5H,m), 2,58-2.68 (2H,m), 2,41-2,50 (2H,t), 1,91-2.02 (2H,m); MS (EI): m/z=149 [M+H+].
- 6-Phenylhexan-3-one.
- N-4-bromobenzyl-N-4-phenylbut-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.15 g, approx. 0.75 mmol/g 0.11 mmol) is suspended in diethyl ether (1 mL) and treated with 1 M solution of ethyl magnesium bromide in tetrahydrofuran (0.34 mL, 0.34 mmol). The reaction mixture is agitated for 18 hours, and then quenched by the addition of 2 M HCl (aq) (approx. pH 3 is obtained). The mixture is agitated for 30 minutes. Sodium sulfate is added and the mixture is filtered through a plug of silica gel, washed thoroughly with dichloromethane and concentrated to give of 6-phenylhexan-3-one. GC MS (EI) Area=97.1%, m/z 176.2 (M) +; MS (EI-LRP) m/z 176 (M)+; NMR (300 MHz, CDCl3) δ 1.02 (t, 3H), 1.9 (m, 2H), 2.4 (m, 4H) 2.6 (m, 2H), 7.2-7.3 (m, 5H).
-
- N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (2.8 g, 2.1 mmol), prepared as in Example 6, is suspended in toluene (27 mL) and the mixture is stirred for 10 minutes. DBU (1.6 g, 10.5 mmol) is added and the mixture is agitated for 2 hours on a wrist shaker. Chlorobenzyl bromide (6.47 g, 31.5 mmol) is added and the reaction mixture is vigorously agitated for 3 days. The resin is filtered and washed with DMF, DMF/H 2O, DMF, THF and Et2O, and dried under vacuum at 40° C. to give N-4-chlorobenzyl-N-(4-bromo-3-methylbenzoyl)4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (3 g). IR C═O 1644 cm−1; Elemental Analysis: calcd: Br, 4.2%; Cl, 1.9%; N, 0.8%. Found: Br, 3.8%; Cl, 2.0%; N, 0.9%.
- N-(4-Chlorobenzyl)-N-hydroxy-3-methyl-4-bromobenzamide.
- N-4-chlorobenzyl-N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin, prepared as in Example 11, is suspended in 50% TFA/CH 2Cl2 for 2 hours. The resin is filtered and washed three times with CH2Cl2 to give N-(4-Chlorobenzyl)-N-hydroxy-3-methyl-4-bromobenzamide. LC MS (H-ISP) m/z 354/356 (Cl/Br) [M+H]+ Area 64%; 1H NMR (300 MHz, CDCl3) 667 2.3 (bs, 3H), 4.65 (bs, 2H), 7.2-7.6 (m, 7H).
- 4-Bromo-3-methyl benzaldehyde.
- N-4-chlorobenzyl-N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamne)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.2 g, 0.5 mmol/g 0.1 mmol), prepared as in Example 11, is suspended in diethyl ether for 10 minutes and then cooled to 5° C. in an orbital shaker. The suspension is treated with LiAlH 3OMe (0.46 M in diethyl ether, 0.2 mL, 0.092 mmol) and agitated for 30 minutes at this temperature. The reaction mixture is quenched by the addition of aqueous 2 M HCl and vortexed for 30 minutes. Sodium potassium tartrate is added and the mixture is vortexed for a further 10 minutes. Sodium sulfate is added and the mixture is filtered through a plug of silica gel, washing thoroughly with dichloromethane. The filtrate is concentrated to give 4-bromo-3-methyl benzaldehyde. GC MS: EI Area=99.5%, m/z 179/199 (Br)[M]+; 1H NMR (CDCl3) δ 9.94 (1H,s), 7.70 (2H,d), 7.52 (1H,d), 2.45 (3H,s); MS (EI): m/z=199 [M+H+].
- 1-(4-Bromo-3-methyl phenyl) propan-1-one.
- N-4-chlorobenzyl-N-(4-bromo-3-methylbenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.23 g, 0.5 mmol/g 0.115 mmol), prepared as in Example 11, is suspended in diethyl ether (1 mL) and treated with ethyl magnesium bromide (1.0 M in THF, 0.23 mL, 0.23 mmol). The reaction mixture is agitated for 18 hours, and then quenched by the addition of aqueous 2 M HCl (approx. pH 3 is obtained). The mixture is agitated for 30 minutes. Sodium sulfate is added and the mixture is filtered through a plug of silica gel, washing thoroughly with dichloromethane. The residue is concentrated to give 1-(4-Bromo-3-methyl phenyl) propan-1-one. GC Area=78.7%; MS (EI) m/z 226 Br [M +-H]; NMR (300 MHz, CDCl3) δ 1.22 (t J=7.89, 3H), 2.96 (q J=7.89, 2H), 7.6 (bs, 2H), 7.8 (s, 1H).
-
- 4-O-Methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (105 mg; 0.08 mmol) is swelled in dichloromethane (DCM)(@ mL) for 10 minutes. Trimethylorthoformate (1 mL) and 3-bromo-benzaldehyde (500 mg; 2.7 mmol; 34 equiv.) are added to the resin and the mixture is shaken overnight. The slurry is then filtered, rinsed with dichloromethane (5 mL), DMF (5 mL×3), H 2O (5 mL×4), THF (5 mL×10, and Et2O (5 mL×10). The resin is dried in vacuo at 40° C. for 12 hours. IR oxime stretch 1602 cm−1. Elemental Analysis: calcd: Br, 5.52%; N, 1.04%. Found: Br, 5.76%; N, 1.08%.
-
- 4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (1 g, 0.73 mmol) is allowed to swell in DMF for 10 minutes and then is treated with 3-(4-methoxyphenyl)propionic acid (0.658 g, 3.65 mmol) and DIC (0.46 g, 3.65 mmol). The mixture is shaken for 24 hours, then filtered. The residue is washed with DMF, DMF/H 2O, DMF, THF and ET2O, and dried under vacuum at 40° C. to give N-3-(4-methoxphenyl)propan-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin. IR: C═O 1698 cm−1. Elemental Analysis: calcd: N, 1.02%. Found: N, 1.21%.
- N-hydroxy-3-(4-methoxyphenyl)propionamide.
- N-hydroxy-3-(4-methoxyphenyl)propionamide is prepared by reaction of N-3-(4-methoxphenyl)propan-1-oyl-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7. 1H NMR 300 MHz (CDCl3, CD3OD) δ 2.25 (t, 2H), 2.78 (t, 2H), 3.68 (s, 3H), 6.72 (d, 2H), 7.04 (d, 2H).
-
- The title resin is prepared using the method of Example 16, except substituting 4-bromophenylacetic acid for 3-(4-methoxyphenyl)propionic acid. IR C═O 1713.9 cm −1. Elemental analysis: calcd: Br, 5.8%; N, 1.02%. Found: Br, 8.29%, 8.18%; N, 0.97%, 0.96%.
EDS: Net X-ray Counts K line L line M line O: 969 1024 C: 2662 3003 Br: 12855 10436 -
- The title resin is prepared using the method of Example 16, except substituting 4-bromocinnamic acid for 3-(4-methoxyphenyl)propionic acid. IR:C═O 1671.7 cm −1 (broad). Elemental analysis: Calcd: Br, 5.8%; N, 1.02%. Found: Br, 4.45%, 4.54%.
EDS: Net X-ray Count K line L line M line O: 818 1365 C: 4549 5059 Br: 6384 5271 - N-hydroxy4-bromocinnamamide.
- N-hydroxy-4-bromocinnamamide is prepared by treating N-4-bromocinnamoyl4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7. LC MS (H-ISP) m/z 241/243 Br [M +], Area=84%; 1H NMR (300 MHz, CDCl3/CD3OD) δ: 3.23 (s, 1H), 6.35 (d, J=15.8), 7.3 (d, J=7.9), 7.4 (d, J=7.9), 7.6 (d, J=15.8).
-
- The title resin is prepared using the method of Example 16, except substituting 4-chlorobenzoic acid for 3-(4-methoxyphenyl)propionic acid. IR: C═O 1678 cm −1. Elemental Analysis: calcd: Cl, 2.66%; N, 1.05%. Found: Cl, 2.39%; N, 1.02%.
- N-Hydroxy4-chlorobenzamide.
- N-Hydroxy-4-chlorobenzamide is prepared by treating N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7. LC MS (H-ISP) m/z 172,174 (Cl) [M+H] +, Area=96%; 1H NMR (300 MHz, DMSO-d6) δ 7.48 (d J=9.42, 2H), 7.69 (d J=9.42, 2H), 8.9-9.2 (broad, 1H), 11.28 (s, 1H).
-
- N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (0.1 g, 0.075 mmol, 0.75 mmol/g) is suspended in toluene (2 mL) and cooled to 5° C. The mixture is treated with methyl iodide (1.5 mmol, 0.21 g, 93 μl) followed by DBU (0.22 mL, 0.228 g, 1.5 mmol ). The reaction mixture is placed in a vortexer and allowed to warm to ambient temperature. Within a few minutes, a copious white precipitate forms and the mixture is diluted further with toluene (2 mL). Agitation of the reaction mixture is continued for 18 hours. The N-methyl-N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is filtered and washed with DMF, DMF/H 2O, DMF, THF, Et2O and dried in vacuo at 40° C.
- 1-(4-chlorophenyl)propan-1-one.
- N-methyl-N-(4-chlorobenzoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is suspended in diethyl ether (0.7 mL) and treated with ethyl magnesium bromide (1.0 M in THF, 0.225 mL, 0.225 mmol). The reaction mixture is agitated for 18 hours on a wrist shaker and then quenched by the addition of 5% HCl in ethanol. Agitation is maintained for a further 30 minutes and the mixture is then filtered through a small plug of silica to remove the inorganic material. The filtrate is concentrated to afford 1-(4-chlorophenyl)propan-1-one. MS (EI-LRP) m/z 168/170 Cl [M +], 169/171 Cl [M+H]+; 1H NMR (300 Mhz, CDCl3) δ 1.22 (t, 3H), 2.98 (q. 2H), 7.42 (d, 2H), 7.9 (d, 2H).
-
- N-[3-((4-methoxyphenyl)sulfonyl)propan-1-oylcarbonyl]-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is prepared using the method of Example 16, except substituting 3-(4-methoxyphenylsulfonyl)propionic acid for 3-(4-methoxyphenyl)propionic acid. IR C═O 1691.6 cm −1 (broad). Elemental Analysis: calcd: N, 1.02%; S, 2.34%. Found: N, 1.03%; S, 2.5%.
- N-hydroxy-3-(4-methoxyphenylsulfonyl)propionamide.
- N-hydroxy-3-(4-methoxyphenylsulfonyl)propionamide is prepared by treating N-[3-((4-methoxyphenyl)sulfonyl)propan-1-oylcarbonyl]-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin with TFA using the procedure of Example 7. 1H NMR (300 Mhz, DMSO-d6) δ 2.25 (t, 2H), 3.42 (t, 2H) 3.85 (s, 3H), 7.13 (d, 2H), 7.79 (d, 2H); LC MS (Ion Spray) m/z 259 [M+], Area=44%
-
- 4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (2 g, 2 mmol) is suspended in 15 ml of dichloromethane and shaken on a wrist shaker for 10 minutes and 284 mg (383 μL, 2.2 mmol) of diisopropylethyl amine is added. The mixture is shaken for 30 minutes. Allyl chloroformate (265 mg, 233 ul, 2.2 mmol) is added and the mixture is shaken overnight. The N-allyoxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with 15 ml of dichloromethane, THF (3×) and dichloromethane (3×) and dried in vacuo.
-
- The N-allyoxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin prepared in Example 27 is suspended in 15 mL of toluene. DBU (1,522 g, 1.5 ml, 10 mmol) and 4-bromobenzyl bromide (2.5 g,10 mmol) are added and the mixture is shaken for 70 hours. The N-4-bromobenzyl-N-alloxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with 15 mL of DMF (3×), THF (3×) and dichioromethane (3×) and dried in vacuo.
-
- N-4-bromobenzyl, N-allyoxycarbonyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin, prepared as in Example 28, is swelled in 6 mL of THF, 6 mL of DMSO, 3 mL of 0.5 n HCl. Pd(Ph 3P)4 (347 mg, 15 weight %) is added and the mixture is shaken for 5 minutes. Morpholine (4.3 mL) is added and the mixture is shaken overnight. The reagents are drained off and the N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with DMF (2×), THF (2×), dichloromethane (2×), 0.5% diisopropylethyl amine in dichloromethane (3×), 0.5% sodium diethyldithiocarbamate in DMF (3×), DMF (3×), THF (3×) and dichloromethane (3×) and dried in vacuo overnight.
-
- N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (1.17 g, 1 mmole), prepared as in Example 29, is suspended in 15 ml of DMF. Indole-2-carboxylic acid (483 mg, 3 mmol) and 575.1 mg (3 mmol) of 1(3-dimethylaminopropyl)-3-diethylcarbodiimide hydrochloride are added and the mixture is shaken for 16 hours. The N-(indol-2-ylcarbonyl)-N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is drained and washed with 15 ml of DMF (3×), THF/20% H 2O (3×), THF (3×), and dichloromethane (3×) and dried in vacuo.
- Indole-2-carboxaldehyde.
- Dry N-(indol-2-ylcarbonyl)-N-4-bromobenzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin is swelled in 12 mL of THF, shaken and cooled at 0° C. for 30 minutes. LiAlH 4 (0.62 ml, 3 eq) is added and the mixture is shaken at 0° C. for 30 minutes. Saturated KHSO4 solution (0.5 mL) and 0.3 mL of potassium, sodium tartrate solution are added and the mixture is shaken for 30 minutes while warming to room temperature. Excess H2O is dried by adding dry Na2SO4 and shaking for 15 minutes more. The mixture is filtered under low nitrogen pressure and washed 3 more times with 8 mL of dichloromethane followed by filtration. The filtrate is dried with Na2SO4 and filtered twice through a short bed (1 inch) of silica gel 60 for column chromatography (particle size 0.040-0.063 mm) and the solvent is removed in vacuo to give indole-2-carboxaldehyde. 1H NMR (CDCl3) δ 9.84 (1H,s), 9.22 (1H,brs), 7.75 (1H,d), 7.14-7.48 (4H,m); MS (EI): m/z=146 [M+H+].
-
- 4-O-Methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin resin (1g, 1 mmole) is washed with DMF (15 mL), then suspended in 15 mL of DMF and 624.6 mg (3 mmole, 3× excess) of 3,4-dimethoxy cinnamic acid and 575.1 mg (3 mmol, 3× excess) of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride are added and the mixture is shaken for 16 hours. The resin is drained and washed with 15 mL of DMF (1×), THF/20% H 2O (3×), THF (3×), dichloromethane (3×) and dried under vacuum overnight.
-
- Dry N-(3,4-dimethoxycinnamoyl)-4-O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is shaken in 15 mL of toluene for 10 minutes, then 0.9 mL (6 mmol, 6× excess) of DBU is added and the mixture is shaken for 2 hours. p-Bromo benzyl bromide (1.5 g, 6 mmol, 6× excess) is added and the mixture is shaken for 3 days. The resin is dried overnight in vacuo.
- 3-4-dimethoxycinnamaldehyde.
- Dry N-4-bromobenzyl-N-(3,4-dimethoxycinnamoyl)-4-O-methylhydroxylanine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin is swelled in 12 mL of dry THF, shaken and cooled to 0° C. for 30 minutes. LiAlH 4 in THF (0.5 mL, 2 equivalents) is added and the mixture is shaken at 0° C. for 30 minutes. Saturated aqueous KHSO4 solution (0.5 mL) and potassium, sodium tartrate solution (0.3 mL) are added and the mixture is shaken for 30 minutes while warming to ambient temperature. Excess H2O is dried by adding dry Na2SO4 and shaking for 15 minutes. The mixture is filtered under low nitrogen pressure, washed 3 times with 8 mL of dichloromethane and filtered. The filtrate is further dried with Na2SO4 and filtered through a short (1 inch) bed of silica gel 60 for column chromatography (particle size 0.040-0.063 mm) and the solvent is removed in vacuo to give 3,4-dimethoxycinnamaldehyde. 1H NMR (CDCl3) δ 9.65 (1H,d), 7.40 (1H,d), 7.12 (1H,d), 7.06 (1H,s), 6.87 (1H,d), 6.60 (1H,dd), 3.90 (6H,s); MS (EI): m/z=193 [M+H+].
- The compounds of Examples 35-42 are prepared from the desired carboxylic acid starting material using the procedures of Examples 32-34.
- Anthranilic aldehyde.
- 1H NMR (CDCl3) δ 9.88 (1H,s), 7,52-7.58 (1H,d), 7.11-7.38 (7H,m), 6.81 (1H,t); MS (EI): m/z=198 [M+H+].
- 2-bibenzylic aldehyde.
- 1H NMR (CDCl3) δ 10.18 (1H,s), 7.83 (1H,d), 7.14-7.52 (8H,m), 3.30 (2H,t), 2.87 (2H,t); MS (EI): m/z=211 [M+H+].
- 4-methoxy-2-quinoline aldehyde.
- 1H NMR (CDCl3) δ 10.17 (1H,s), 8.27 (1H,d), 8.18 (1H,d), 7.78 (1H,t), 7.62 (1H,t), 7.38 (1H,s), 4.12 (3H,s); MS (EI): m/z=188 [M+H+]
- 3-acetamido benzaldehyde. 1H NMR (CDCl3) δ 9.98 (1H,s), 7.97 (1H,s), 7.86 (1H,d), 7.62 (1H,d), 7.48 (1H,t), 2.21 (3H,s). MS (EI): m/z=164 [M+H+].
- 4-(4-N-propylphenyl) benzaldehyde.
- 1H NMR (CDCl3) δ 10.02 (1H,s), 7,92 (2H,d), 7.72 (2H,d), 7.53 (2H,d), 7.26 (2H,d), 2.65 (2H,t), 1.68 (2H, dt), 0.95 (3H,t); MS (EI): m/z=225 [M+H+].
- 3-quinoline aldehyde.
- 1H NMR (CDCl3) δ 10.26 (1H,s), 9.38 (1H,s), 8.64 (1H,s), 8.20 (1H,d), 7.98 (1H,t), 7.89 (1H,t), 7.65 (1H,t); MS (EI): m/z=158 [M+H+].
- 3-(3,4-methylenedioxy) propionaldehyde.
- 1HNMR (CDCl3) δ 9.80 (1H,s), 7.60-7.74 (3H,m), 5.92 (2H,s), 2.88 (2H,t), 2,74 (2H,t); MS (EI): m/z=179 [M+H+].
- 2-phenyl-4-quinoline aldehyde.
- 1H NMR (CDCl3) δ 10.58 (1H,s), 9.00 (1H,d) 8.19-8.30 (4H,m), 7.82 (1H,t), 7.70 (1H,t), 7.47-7.59 (3H,m); MS (EI): m/z=234 [M+H+].
-
- Merrifield resin (2 mmol/g, 600 mg, 1.2 mmol) is swelled in anhydrous DMF (20 mL). 2,3,5,6-tetrafluoro-4-hydroxy benzoic acid hydrate (2.28 g, 10 mmol) and cesium carbonate (3.26 g, 10 mmol) are added and the reaction mixture is heated at 85° C. for 12 hours with gentle agitation. The reaction mixture is filtered and the 4-carboxy-2,3,5,6-tetrafluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin is washed with DMF (5×), 20% aqueous DMF (5×), THF (5×) and dichloromethane and dried overnight in vacuo. IR (microscope, cm-1): 1640 (C═O); 19F NMR (nanoprobe) −144.4 ppm, −160.2 ppm.
-
- 4-(O-Methylhydroxylamine)phenoxymethyl-copoly(styrene-1%-divinylbenzene)-resin (2g; 2 mmol), prepared as in Example 4, is swelled in DCM (15 ml), DIEA (0.383 ml; 2.2 mmol) is added and the mixture is shaken for 1 hour. Allyl chloroformate (0.234 ml; 2.2 mmol) is added and the mixture is shaken overnight. The resin is drained and washed three times each with DCM, THF and DCM and dried in vacuum. The dry resin is swelled in anhydrous toluene (18 ml), DBU (1.5 ml; 10 mmol) added and the mixture is shaken for 1 hour. Benzyl bromide (1.19 ml; 10 mmol) is added and the mixture is shaken for 3 days. The resin is drained and washed three times each with DCM, DMF, THF and DCM and dried overnight in vacuum. To the resin is added THF (6 ml), DMSO (6 ml), 0.5 N HCl (2.5 ml), tetrakis(triphenylphosphine)palladium(0) (347 mg; 15 mol %) and morpholine (4.3 ml) and the mixture is shaken overnight. The resin is then drained and washed in three times each with DMF, THF, DCM, 0.5% in DCM, 0.5% sodium diethyldithiocarbamate in DMF, DMF, THF and DCM and then dried in vacuum. A resin sample is cleaved with excess 1:1 TFAIDCM for 1 hour at ambient temperature, then washed three times with 1 ml of the cleavage mixture, evaporated and dried in vacuo. 1H NMR (CD3OD): δ 7.44 (m, 5H), 4.36 (s, 2H); MS (EI): m/z=124 [M+H]+.
-
- To a suspension of chloromethyl polystyrene (Merrifield resin) (5.0 g, 8.9 mmol, resin loading 1.78 mmol/g) and cesium carbonate (29.0 g, 90 mmol, 10 eq.) in dry DMF (100 ml) was added 4-hydroxy-2-fluoroacetophenone (6.9 g, 45 mmol, 5 eq.) in dry DMF (20 ml). The mixture was mechanically stirred at 80° C. for 24 hours. The solution was cooled, washed with THF: 1N HCl soin. (3:1, ×3), THF:H 2O (3:1, ×3), THF (×3) and DCM (×3). The 4-(1-ethanone)-2-fluorophenoxymethyl)-copoly (styrene-1% divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) 1682 cm−1. d19F (CDCl3) −108 ppm. Theoretical loading 1.47 mmol/g. Analysis found C, 80.04; H, 6.47; F, 2.92, which corresponds to 1.53 fluorine atoms/g; 1.47 calculated for 100% loading.
-
- To a suspension of 4-(1-ethanone)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin (0.25 g, 0.37 mmol) in dry THF was added lithium borohydride (0.93 ml of a 2.0 M soln. in THF, 1.85 mmol, 5 eq.). The mixture was shaken at room temperature for 4 hours. The resin was filtered, washed with THF (×3), THF:H 2O (3:1, ×3), THF (×3) and DCM (×3). The 4-(hydroxylethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) disappears. d19F (CDCl3) −121 ppm. Theoretical loading 1.47 mmol/g. Analysis found C, 78.02; H, 6.79; F, 2.76, which corresponds to 1.45 fluorine atoms/g; 1.47 calculated for 100% loading.
-
- To a suspension of 4-(hydroxylethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin (2.0 g, 2.9 mmol), triphenylphosphine (2.3 g, 8.7 mmol, 3 eq.) and N-hydroxyphthalimide (2.4 g, 14.5 mmol, 5 eq.) in THF (30 ml) at 0° C. was added diisopropylazodicarboxylate (1.7 ml, 8.7 mmol, 3 eq.). The solution was allowed to warm to room temperature over ca. 30 minutes. The mixture was shaken for 24 hours. The resin was filtered, washed with DMF (×3), MeOH (×3), THF (×3), DCM (×3). The hydroxyphthalimido resin was dried in vacuo at 40° C. overnight. IR (C═O) 1737 cm −1. 19F (CDCl3) −119 ppm. Theoretical loading 1.19 mmol/g.
- The hydroxyphthalimido resin was re-suspended in THF (40 ml) and methylamine (20 ml of a 40% wt. soln. in water) was added. The reaction mixture was heated at 40° C. for 2 hours. The resin was filtered, washed with DMF (×3), MeOH (×3), THF (×3), DCM (×3). The resin was dried in vacuo at 40° C. overnight to give the 4-(methyl-O-methylhydroxylamine)-2-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin. IR (C═O) disappears, (N-H) 3380 cm −1 broad. Analysis found C, 82.62; H, 7.21; N, 0.60; F, 3.13. d19F (CDCl3) −120 ppm. Theoretical loading 1.41 mmol/g.
-
- To a suspension of the 4-(methyl-O-methylhydroxylamine)-2-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin (2.78 g, 3.92 mmol) in CH 2Cl2 (30 ml) was added allyl chloroformate (1.25 ml, 11.8 mmol, 3 eq.) and diisopropylethylamine (2.05 ml, 11.8 ml, 3 eq.). The mixture was shaken for 24 hours. The resin was filtered, washed with CH2Cl2 (×3), THF (×3), THF:H2O (3:1, ×3), THF (×3), DCM (×3). The N-(1-propylenecarbonyl)4-(methyl-O-methylhydroxylanine)-2-fluorophenoxymethyl-copoly(styrene-1%-divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) 1757 cm−1. 19F (CDCl3) −120 ppm. Theoretical loading 1.26 mmol/g.
- The N-(1-propylenecarbonyl)-4-(methyl-O-methylhydroxylane)-2-fluorophenoxymethyl-copoly (styrene-1%-divinylbenzene) resin was re-suspended in dry toluene (30 ml) and DBU (2.93 ml, 19.6 mmol, 5 eq.) was added. The reaction mixture was shaken for 1 hour. Benzyl bromide (2.33 ml, 19.6 mmol, 5 eq.) was then added. The resin was shaken overnight. The resin was filtered, washed with THF (×3), THF;H 2O (3:1, ×3), THF (×3), DCM (×3). The N-benzyl-N-(1-propylenecarbonyl)-4-(methyl-O-methylhydroxylamine)-2-fluorophenoxymethyl-copoly(styrene-1%-divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) 1761 cm−1. d19F (CDCl3) −120 ppm. Theoretical loading 1.13 mmol/g.
- The resin was suspended in DMSO (10 ml) and THF (10 ml). 0.5 N HCl soln (2.5 ml) was added followed by tetrakis(triphenylphosphine)palladium (0.23 g, 0.196 mmol, 5 mol %) and morpholine (5 ml). The mixture was shaken overnight. The resin was filtered, washed with DMF (×5), THF (×3), MeOH (×3), DCM (×3), 0.5% conc. HCl in DMF (×3), 5 wt % diethyldithiocarbamate in DMF (×3), DMF (×5), THF (×3), MeOH (×3), DCM (×3) and dried in vacuo at 40 ° C overnight to afford the N-benzyl-4-(methyl-O-methylhydroxylamine)-2-fluorophenoxymethyl-copoly(styrene-1%-divinylbenzene) resin. IR (C═O) disappears. d 19F (CDCl3) −120 ppm. Theoretical loading 1.25 mmol/g.
-
- To a suspension of the 4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin (1.0 g, 1.47 mmol) in dry DMF (20 ml) was added Fmoc-Gly-OH (1.31 g, 4.41 mmol, 3 eq.), pyridine (0.71 ml, 8.82 mmol, 6 eq.) and 2,6-dichlorobenzoyl chloride (0.63 ml, 4.41 mmol, 3 eq.). The mixture was shaken overnight. The mixture was filtered and washed with THF (×3), THF:H 2O (3:1, ×3), THF (×3), MeOH (×3) and CH2Cl2 (×3). The O-(N-9-fluorenylmethoxycarbonyl glycine)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) 1726 cm−1. 19F-118 ppm. Theoretical loading 1.04 mmol/g.
-
- The resin (0.75 g, 0.78 mmol) was suspended in 20% piperidine solution in DMF (10 ml). The mixture was shaken for 2 hours. The solution was filtered and washed with DMF (5) and NMP (×5). The resin was re-suspended in NMP (8 ml) and benzophenone imine (1.3 ml, 7.8 mmol, 10 eq.) and acetic acid (0.40 ml, 7.0 mmol, 9 eq.) was added. The mixture was shaken overnight. The solution was filtered and washed with NMP (×5), CH2Cl2 (×3), THF (×3), THF:H 2O (3:1, ×3), THF (×3), CH2Cl2 (×3). The O-(N-diphenylmethylene glycine)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) 1742 cm−1, (C═N) 1627 cm−1. Theoretical loading 1.11 mmol/g.
-
- The O-(N-diphenylmethylene glycine)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin (0.045 g, 50 mmol) was suspended in dry NMP (1 ml) and 4-methylbenzyl bromide (0.019 g, 100 mmol, 2 eq.) was added followed by 2-tert-butylirnino-2-diethylamino-1,3-dimethyl-perhydro-1,3,2-diaza-phosphorine (0.03 ml, 100 mmol, 2 eq.). The mixture was shaken overnight. The resin was filtered and washed with NMP (×3), DCM (×3), THF (×3), THF:H 2O (3:1, ×3), THF (×3).
- A mixture of THF:1N HCl soln. (2:1, 1.5 ml) was added to the resin and the rmixture shaken for 4 hours. The resin was filtered and washed with NMP (×3), DIEA:NMP (1:10, ×3), NMP (×3), DCM (×3), NMP (×3).
- The resin was re-suspended in NMP (1 ml) and 2-naphthoic acid (0.086 g, 500 mmol, 10 eq.), HOBt (0.068 g, 500 mmol, 10 eq.) and DIC (0.078 ml, 500 mmol, 10 eq.) were added. The mixture was shaken overnight. The resin was filtered and washed with NMP (×3), DCM (×3), DCM:MeOH (1:1, ×3), MeOH (×3) and DCM (×3).
- Trifluoroacetic acid (1 ml) and DCM (1 ml) were added and the mixture was shaken for 1 hour. The solution was filtered into a tared vial, and the resin was washed with DCM (×3). The solvent was removed in vacuo to yield N-[1-(4-methylphenyl)-ethanoic acid]-2-naphthalenecarboxamide (0.0167 g, 100%). LCMS gives 333 [(M) +, 100%].
- Preparation of O-(diethylphosphonoaceto)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin
- To a suspension of the 4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin (1.0 g, 1.47 mmol) in dry DMF (8 ml) was added diethylphosphonoacetic acid (0.71 ml, 4.41 mmol, 3 eq.), pyridine ( (0.71 ml, 8.82 mmol, 6 eq.) and 2,6-dichlorobenzoyl chloride (0.63 ml, 4.41 mmol, 3 eq.). The reaction mixture was shaken overnight. The resin was filtered, washed with DMF (×3), THF (×3), DCM (×3), MeOH (×3) and THF (×3). The O-(diethylphosphonoaceto)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin was dried in vacuo at 40° C. overnight. IR (C═O) 1737 cm −1, (P═O) 1260 cm−1. d19F (CDCl3) —119 ppm. Theoretical loading 1.17 mmol/g.
-
- To a suspension of the O-(diethylphosphonoaceto)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene) resin (0.1 g, 0.117 mmol) in dry THF (3 ml) at 0° C. was added LiHMDS soln (0.29 ml of a 1.0 M soln. in THF, 0.29 mmol, 2.5 eq.). The solution was allowed to warm to room temperature over 30 minutes. The solution was filtered under an inert atmosphere, and p-tolualdehyde (0.033 ml, 0.28 mmol, 2.4 eq.) in dry cyclohexane (1.5 ml) was added. The reaction mixture was shaken overnight. The resin was filtered, washed with DMF (×3), THF:H 2O (3:1, ×3), DCM (×3), THF (×3) and DCM (×3). The resin was dried in vacuo at 40° C. overnight. IR (C═O) disappears, (P═O) disappears.
- Trifluoroacetic acid (1 ml) and DCM (1 ml) were added and the mixture was shaken for 1 hour. The solution was filtered into a tared vial, the resin was washed with DCM (×3). The solvent was removed in vacuo to yield 4-methylcinnamic acid (0.0201 g, quant). LCMS gives 144 [(M-H 2O)+, >90%].
-
- To a suspension of the 4-(methyl-O-methylhydroxylamine)-2-fluorophenoxymethyl-copoly(styrene-1% divinylbenzene) resin (0.10 g, 0.14 mmol) in dry DMF (2 ml) is added 1-[3-(dimethylamino)propyl]-3-ethylcarbodiimide hydrochloride (0.08 g, 0.42 mmol, 3 eq.). To the mixture is then added phenylacetic acid (0.06 g, 0.42 mmol, 3 eq.). The mixture is shaken overnight. The resin is filtered and washed with DMF (×5), THF:H 2O (3:1, ×5), THF (×3), MeOH (×3) and DCM (×3).
- To the resin is added TFA (1 ml) and DCM (1 ml) and the mixture shaken for 1 hour. The mixture is filtered into a tared vial and the resin washed with DCM (×2) and toluene (×2). The combined filtrates are evaporated in vacuo to yield N-hydroxy-phenyl-acetamide (0.0084 g, 39%). LCMS gives 151 [M +].
-
-
- Alternatively, the benzylic alcohol resin derivate of Example 56 is made as illustrated in Examples 56a-56e.
-
- To a suspension of sodium hydride (6.05 g, 151.2 mmol, 60% wt. in oil) in dry THF (150 ml) under an inert atmosphere (nitrogen) is slowly added 2-fluoro-4-hydroxyacetophenone (23.3 g, 151.2 mmol) in dry THF (150 ml). The solution is heated to reflux for 1 hour. The solution is then cooled to room temperature and chloromethyl methyl ether (12.0 ml, 144 mmol) in dry THF (50 ml) is added dropwise over 15 minutes. The solution is refluxed for 1 hour. The solution is poured into water (500 ml) and extracted with ether (3×150 ml). The combined extracts are dried over MgSO 4 and evaporated in vacuo to give a brown liquid. The product is obtained as a colorless liquid (27.8 g, 93%) after column chromatography (silica; hexane;ethyl acetate; 5:1, v/v). δH (300 MHz, CDCl3) 2.54 (3H, s), 3.44 (3H, s), is 5.17 (2H, s), 6.72-6.82 (2H, m), 7.82 (1H, t, J=8.7 Hz); δC (75 MHz, CDCl3) 31.39, 31.49, 56.62, 94.56, 103.91, 104.28, 112.66, 119.57, 119.74, 131.86, 162.18, 162.56, 162.72, 165.56, 194.66, 194.71; m/z 198 [(M+), 100%].
-
- To a solution of 2-fluoro-4-methoxymethoxyacetophenone (20.0 g, 101 mmol) in dioxane (100 ml) is added sodium hypochlorite solution (200 rml, 10-13%). The solution is heated at 70° C. for 5 hours, after which time a further amount of sodium hypochlorite solution (100 ml, 10-13%) is added and heating continued overnight. The solution is cooled and extracted with ether (2×200 ml). The aqueous layer is acidified (conc. HCl) and extracted with ether (3×200 ml). The combined extracts are dried over MgSO 4 and evaporated in vacuo to give an off-white solid (19.9 g, 99%). δH (300 MHz, CDCl3) 3.38 (3H, s), 5.12 (2H, s), 6.70-6.79 (2H, m), 7.85 (1H, t, J=8.8 Hz); δC (75 MHz, CDCl3) 56.65, 95.50, 105.16, 105.51, 113.02, 113.08, 134.66, 134.69, 163.09, 163.68, 163.84, 166.52, 167.14, 167.19, 205.33; m/z 200 [(M+), 60%].
-
- To a solution of 2-fluoro-4-methoxymethoxybenzoic acid (19.9 g, 100 mmol) in methanol (200 ml) is added conc. hydrochloric acid solution (0.5 ml, catalytic). The solution is heated at reflux overnight. The solution is evaporated in vacuo to give an off-white solid (16.9 g, 100%). δ H (300 MHz, CD3OD) 3.83 (3H, s), 6.52 (1H, dd, J=2.3, 12.9 Hz), 6.63 (1H, dd, J=2.1, 8.5 Hz), 7.78 (1H, t, J=8.7 Hz); δC (75 MHz, CD3OD); m/z 170 [(M+), 10%], 139 [(M-OMe)+, 10%]52.34, 104.30, 104.34, 110.78, 112.48, 134.61, 134.96, 163.36, 163.61, 164,93, 165.03, 165.09, 165.19, 166.38, 166.46, 166.79, 167.03, 167.60, 167.65, 205.58.
-
- To a suspension of Merrifield resin (5.0 g, 8.9 mmol, loading 1.78 mmol/g) and cesium carbonate (30.0 g, 89 mmol) in dry DMF (80 ml) is added methyl-2-fluoro-4-hydroxybenzoate (7.57 g, 44.5 mmol) in dry DMF (40 ml). The suspension is mechanically stirred at 80° C. overnight. The mixture is cooled, filtered and washed with DMF (×3), THF;1N HCl (3:1, ×3), THF:H 2O (3:1, ×3), THF (×3) and MeOH (×3). The resin is dried in vacuo overnight. δF (75 MHz, CDCl3) −108 ppm. IR (C═O) 1717 cm−1. Theoretical loading 1.44 mmol/g. Analysis found C,?; H,?; F,?, which corresponds to ??? fluorine atoms/g; ??? calculated for 100% loading.
-
- The resin (6.2 g, 8.9 mmol, loading 1.44 mmol/g) was swelled in dry THF (30 ml) with gentle agitation for 15 minutes. To the suspension was added lithium aluminum hydride solution (44.5 ml, 44.5 mmol, 1.0 M solution in THF). The resin was agitated for 2 hrs. The mixture was filtered and washed with fTHF (×3), THF:H 2O (3:1, ×3), MeOH (×3), THF (×3) and CH2Cl2 (×3). The resin was dried in vacuo overnight. OF (75 MHz, CDCl3)ppm. IR (C═O) 1717 cm−1 disappears. Theoretical loading 1.44 mmol/g. Analysis found C,?; H,?; F,?, which corresponds to ??? fluorine atoms/g; ??? calculated for 100% loading.
-
-
- To a suspension of fluorinated chloromethyl polystyrene (fluoro-Merrifield resin) (5.0 g, 8.0 mmol, resin loading 1.60 mmol/g, 5 wt % Fluorostyrene) and cesium carbonate (26.1 g, 80 mmol, 10 eq.) in dry DMF (80 ml) is added 4-hydroxy-2-fluoroacetophenone (6.17 g, 40 mmol, 5 eq.) in dry DMF (20 ml). The mixture is mechanically stirred at 80° C. for 24 hours. The solution is cooledand washed with THF: 1N HCl soln. (3:1, ×3), THF:H 2O (3:1, ×3), THF (×3) and DCM (×3). The 4-(1-ethanone)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin is dried in vacuo at 40° C. overnight. IR (C═O) 1682 cm−1. d19F (DMF) −109, −122 ppm. Theoretical loading 1.35 mmol/g. Analysis found C, 84.25; H, 6.80; F, 3.86.
-
- To a suspension of the 4-(1-ethanone)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin (3.0 g, 4.05 mmol) in dry THF (50 ml) is added lithium borohydride (10.1 ml of a 2.0 M soln. in THF, 20.2 mmol, 5 eq.). The mixture is shaken at room temperature for 2 hours. The resin is filtered and washed with THF (×3), THF:H 2O (3:1, ×3), THF (×3) and DCM (×3). The 4-(1-hydroxylethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin is dried in vacuo at 40° C. overnight. IR (C═O) disappears. d19F (DMF) −121, −122 ppm. Theoretical loading 1.35 mmol/g. Analysis found C, 84.00; H, 7.10; F, 3.77.
-
- To a suspension of the 4-(1-hydroxylethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin (1.5 g, 2.03 mmol) in dry DMF (20 ml) are added diethylphosphonoacetic acid (0.98 ml, 6.1 mmol, 3 eq.), pyridine (0.99 ml, 12.2 mmol, 6 eq.) and 2,6-dichlorobenzoyl chloride (0.87 ml, 6.1 mmol, 3 eq.). The reaction mixture is shaken overnight. The resin is filteredand washed with DMF (×3), THF (×3), DCM (×3), MeOH (×3) and THF (×3). The O-(diethylphosphonoacetate)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin is dried in vacuo at 40° C. overnight. IR (C═O) 1742 cm −1, (P═O) 1265 cm−1. 19F (DMF) −120, −121 ppm. Theoretical loading 1.17 mmol/g.
-
- To a suspension of the O-(diethylphosphonoacetate)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin (0.1 g, 0.11 mmol) in dry THF (3 ml) at 0° C. is added LiHMDS soln (0.55 ml of a 1.0 M soln. in THF, 0.55 mmol, 5 eq.). The solution is allowed to warm to room temperature over 30 minutes. The solution is filtered under an inert atmosphere, and p-tolualdehyde (0.08 ml, 0.66 mmol, 6 eq.) in dry cyclohexane (1.5 ml) is added. The reaction mixture is shaken overnight. The resin is filtered and washed with DMF (×3), THF:H 2O (3:1, ×3), DCM (×3), THF (×3) and DCM (×3). The resin is dried in vacuo at 40° C. overnight. IR (C═O) disappears, (P═O) disappears. 19F (DMF) −119, −121 ppm.
- Trifluoroacetic acid (1 ml) and DCM (1 ml) are added to the resin and the mixture is shaken for 1 hour. The solution is filtered into a tared vial and the resin is washed with DCM (×3). The solvent is removed in vacuo to yield 4-methylcinnamic acid (17.6 mg, 99%). 1H NMR (MeOH) 2.35 (3H, s), 6.40 (1H, d, J=16 Hz), 7.21 (2H, d, J=8 Hz), 7.46 (2H, d, J=8 Hz), 7.63 (1H, d, J=16 Hz). LCMS gives 162 [(M)+, 100%].
-
- To a suspension of the starting resin (0.25 g, 0.34 mmol) in dry DMF (4 ml) are added Fmoc-Phe-OH (0.40 g, 1.02 mmol, 3 eq.), pyridine (0.16 ml, 2.04 mmol, 6 eq.) and 2,6-dichlorobenzoyl chloride (0.15 ml, 1.02 mmol, 3 eq.). The mixture is shaken overnight. The mixture is filtered and washed with THF (×3), THF:H 2O (3:1, ×3), THF (×3), MeOH (×3) and CH2Cl2 (×3). The O-(N-9-fluorenylmethoxycarbonyl phenylalanine)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin is dried in vacuo at 40° C. overnight. IR (C═O) 1732 cm−1. Theoretical loading 0.89 mmol/g.
-
- To a suspension of O-(N-9-fluorenylmethoxycarbonyl phenylalanine)-4-(hydroxyethyl)-2-fluorophenoxymethyl)-copoly(styrene-1% divinylbenzene-5% 4-fluorostyrene) resin (0.04 g, 0.036 mmnol) is added piperidine in DMF (10% soln., 1 ml). The mixture is shaken for 1 hour. The mixture is filtered and washed with DMF (×5) and NMP (×5). IR (C═O) 1737 cm −1.
- The resin is re-suspended in NMP (1.5 ml) and Fmoc-Gly-OH (0.069 g, 225 mmol, 5 eq.), HOBt (0.034 g, 225 mmol, 5 eq.) and DIC (0.035 ml, 225 mmol, 5 eq.) are added. The mixture is shaken overnight. The mixture is filtered and washed with NMP (×3), DCM (×3), DCM:MeOH (1:1, ×3), MeOH (×3) and DCM (×3). IR (C═O) 1668, 1732 cm −1. Trifluoroacetic acid (1 ml) and DCM (1 ml) are added to the resin and the mixture is shaken for 1 hour. The solution is filtered into a tared vial and the resin is washed with CH2Cl2 (×3). The solvent is removed in vacuo to yield Fmoc-Gly-Phe-OH (12.2 mg, 78%). LCMS gives 444 [(M)+, 100%].
- N-α-(tert-Butoxycarbonyl)-L-alaninal.
- N-4-benzyl-4-(O-methylhydroxylamine)phenoxymethyl-copoly(styrene-1% divinylbenzene) resin (1.08 g; 1 mmole), prepared as in Example 44, is washed with DMF (15 ml), suspended in 15 ml of DMF and Boc-Ala-OH (568 mg; 3 mmol) and EDCI (575.1 mg; 3 mmol) are added and the mixture is shaken for 16 hours. The resin is drained and washed with 15 ml of DMF (2×), THF/20% H 2O (3×), THF (3×), DCM (3×) and dried in vacuo overnight. The dry resin is swelled in 12 ml of anhydrous THF under nitrogen, shaken for 10 minutes and cooled to 0° C. for 30 min. LAH in THP (0.75 ml; 3 mmol) is added and the mixture is shaken at 0° C. for 30 minutes. Saturated KHSO4 (0.5 ml) and K, Na tartrate (0.3 ml) solutions are added and the reaction mixture is shaken for 20 minutes while warming to ambient temperature. Excess water is dried by addition of dry Na2SO4 and shaking for 15 minutes. The mixture is filtered under low nitrogen pressure, washed three times with 8 ml of DCM and filtered. The filtrate is further dried with Na2SO4 and filtered with DCM through a short (1 inch) bed of silica gel 60 for column chromatography (particle size 0.040-0.063 mm). Solvent removal and drying in vacuo afford 44 mg of the title compound. 1H NMR: δ 9.56 (s, 1H), 5.10 (brs, 1H), 4.22 (q, 1H), 1.45 (m, 9H), 1.34 (d, 3H); MS (IS): m/z=173 [M+]. Purity estimated 90% by 1H NMR.
- The following compounds are prepared from the appropriate amino acid starting material using the method of Example 64.
- N-α-(tert-Butoxycarbonyl)-L-valinal.
- 1H NMR: δ 9.61 (s, 1H), 5.09 (brs, 1H), 4.27 (m, 1H), 1.80 (brm, 1H), 1.48 (m, 9H), 1.03 (d, 3H), 0.95 (d, 3H); MS (IS): m/z=201 [M+]. Purity estimated 90% by 1H NMR.
- N-α-(tert-Butoxycarbonyl)-β-phenylalaninal.
- 1H NMR: δ 9.62 (s, 1H), 7.12-7.34 (m, 5H), 5.04 (brs, 1H), 4.42 (t, 1H), 3.09 (d, 2H), 1.39 (s, 9H); MS (IS): m/z=250 [M+H]+ LC Area (UV220)=91%.
- N-α-(tert-Butoxycarbonyl)-β-(t-butyl)-L-aspartal.
- 1H NMR: δ 9.63 (s, 1H), 5.60 (brs, 1H), 2.82 (m, 2H), 2.02 (m, 1H), 1.42 (m, 18H); MS (IS): m/z=274 [M+H]+ LC Area (UV220)=80%.
- N-α-(tert-Butoxycarbonyl)-N-ε-(tert-butoxycarbonyl)-L-lysinal-OH.
- 1H NMR: δ 9.53 (s, 1H), 5.21 (brs, 1H), 3.12 (m, 2H), 1.88 (m, 2H), 1.18-1.66 (m, 22H); MS (IS): m/z=331 [M+H]+ LC Area (UV220)=67%.
- Indole-2-carboxaldehyde.
- 1H NMR: δ 9.82 (s, 1H), 7.14-7.75 (m, 6H); MS (EI): m/z=145 [M+] LC Area (UV254)=90%.
-
- i) Lithium bis(trimethylsilyl)amide (4 equiv., 1.0 M in THF); THF, 1 hour, 25° C.
- ii) Remove solvent; add R nCHO (5 equiv., 0.5 M in 60% cyclohexane/THF); 2-3 days; 25° C.
- iii) 30% trifluoroacetic acid/dichloromethane; 1 hour; 25° C.
- The Parallel syntheses are accomplished using a Tecan Combitec organic synthesis robot. Forty eight reaction vessels are placed in the robot's reaction block and a slurry of ethyl phosphonate resin compound in THF is transferred by pipette into each of the reaction vessels. For this synthesis it is found to be more convenient to load the phosphonates to the resin on a large scale, then split the resin into the reaction block. The robot dispenses anhydrous THF to the reaction vessels, followed by the solution of base (1.0 molar in THF) as they sit on the deck of the robot in an ice bath. The sixteen aldehydes (see Table 1) are prepared as 0.5 molar solutions in 60% cyclohexane in THF. The reaction block is then manually moved to an orbital shaker and agitated for one hour at ambient temperature. The reaction block is then placed back on the instrument. The vessels are then drained, and solutions of the aldehydes are dispensed to their respective reaction vessels. The reaction block is then moved to an orbital shaker and agitated for 2-3 days at ambient temperature. Work-up of the reaction on the robot consists of draining the vessels and washing the resin with THF, 20% aqueous DMF, DMF, THF, and then dichloromethane. A total of 21 washes are needed to remove all the impurities in the resin matrix. The resin is then sampled for single bead FT IR analysis. The diagnostic carbonyl shift is a qualitative means of determining whether the reaction has gone to completion.
- The anthranilic acid products are then cleaved from the resin using 30% trifluoroacetic acid (TFA) in dichloromethane. The TFA solutions are transferred to pre-tared test tubes contained in a Benchmate II 6 compatible 5×10 position rack, which had been defined on the deck of the robot. This format effectively couples sample concentration and weighing. Sample concentration is achieved using the Zymark Turbovap concentrator, in which the Benchmate II compatible rack fits, for efficient nitrogen blow-down of the samples. The Benchmate II compatible rack containing the desired samples is then placed in a Zymark Turbovap concentrator to remove the solvent (the Turbovap having been modified slightly by coating the manifolds with Teflon to prevent corrosion of the gas nozzles). The forty eight samples each containing approximately 3 mL of 30% TFA in dichloromethane are concentrated in about thirty minutes. The samples are usually chased with a one milliliter portion of methanol, then re-evaporated, to ensure complete removal of the TFA solution. The reaction set is then analyzed by 1H NMR and LC-MS (See Table 1).
TABLE 1 Anthranilic IR Resin Acid Purity C═O (A% @ Example Rm Stretch Rn UV220) 70 Et 1733 — — 71 Ph(CH2)3— 1733 — — 72 H 1737 — — 73 Et 1707 A 81 74 Et 1704 B 92 75 Et 1711 C 95 76 Et 1699 D 85 77 Et 1703 E 95 78 Et 1708 F 95 79 Et 1706 G 85 80 Et 1709 H 90 81 Et 1708 I 96 82 Et 1705 J 97 83 Et 1704 K 77 84 Et 1706 L 95 85 Et 1707 M 50 86 Et 1705 N 93 87 Et 1703 O 81 88 Et 1703 P 80 89 Ph(CH2)3— 1707 A 93 90 Ph(CH2)3— 1705 B 88 91 Ph(CH2)3— 1711 C 89 92 Ph(CH2)3— 1699 D 87 93 Ph(CH2)3— 1703 E 88 94 Ph(CH2)3— 1708 F 82 95 Ph(CH2)3— 1707 G 90 96 Ph(CH2)3— 1708 H 86 97 Ph(CH2)3— 1708 I 97 98 Ph(CH2)3— 1704 J 91 99 Ph(CH2)3— 1704 K 76 100 Ph(CH2)3— 1705 L 93 101 Ph(CH2)3— 1706 M 73 102 Ph(CH2)3— 1705 N 80 103 Ph(CH2)3— 1702 O 95 104 Ph(CH2)3— 1702 P 83 105 H 1712 A 76 106 H 1711 B 87 107 H 1717 C 93 108 H 1706 D 48 109 H 1708 E 90 110 H 1711 F 75 111 H 1708 G 50 112 H 1712 H 85 113 H 1714 I 70 114 H 1711 J 81 115 H 1708 K 90 116 H 1711 L 85 117 H 1711 M 74 118 H 1711 N 76 119 H 1711 O 75 120 H 1711 P 89 A = B = C = D = E = F = G = H = I = J = K = L = M = N = O = P = - 3-(3,4-dimethoxybenzenesulfonyl)-5-methylhexanoic acid hydroxyamide.
- Step A: Wang resin (20 g, 15 mmol) is swelled in 300 mL of anhydrous DMF for 15 minutes. Then a solution of diethyl phosphonoacetic acid (8.83 g, 45 mmol) in 50 mL of DMF is added followed by pyridine (7.12 g, 90 mmol) and 2,6-dichlorobenzoyl chloride (9.4 g, 45 mmol). The mixture is agitated for 20 hours at room temperature. The resin is filtered and washed successively with DMF (3×), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c═o 1738 cm−1
- Step B: The loaded resin from Step A (1 g, 0.75 mmol) is swelled in anhydrous THF (10 mL) for 15 minute followed by the addition of a 0.5 M solution of potassium bis(trimethylsilyl)amide in toluene (4 mL) at 0° C. The mixture is allowed to warm up to room temperature and is shaken for 30 minutes. The solvent is then drained to the top of the resin followed by the addition of anhydrous cyclohexane (10 mL) and isovaleraldehyde (0.17 g, 2 mmol). The mixture is shaken for approximately 72 hours and worked up as described in Step A. IR (micro) u c═o 1718 cm −1
- Step C: To a solution of 3,4-dimethoxybenzenethiol (11.9 g, 70 mmol) in anhydrous THF (54.4 mL) at 0° C. is added a 2.5 M solution of n-butyllithium (5.6 mL, 14 mmol) and the solution is stirred at room temperature for 15 minutes.
- The resin from Step B (0.25 g, 0.19 mmol) is swelled in anhydrous THF (2.5 mL) for 15 minutes and 4 mL of the above prepared 1 N thiol/thiolate stock solution is added. The mixture is shaken for approximately 100 hours and worked up as described in Step A. IR (micro) u c═o 1732 cm −1
- Step D: The resin from step C (0.25 g, 0.19 mmol) is swelled in 1,4-dioxane (5 mL) for 15 minutes and a solution of m-chloroperoxybenzoic acid (0.44 g, 2.5 mmol) in 2 mL of 1,4-dioxane is added. The mixture is shaken for 16 hours and worked up as described in Step A.
- Step E: The resin from Step D (0.25 g, 0.19 mmol) is treated with 1:1 dichloro-methane/trifluoroacetic acid (3 mL) for 1-2 hours. The resin is filtered and washed with dichloromethane (2×1 mL). The combined filtrates are concentrated in vacuo to provide 3-(3,4-dimethoxybenzenesulfonyl)-5-methylhexanoic acid (9.8 mg). 1H NMR (300 MHz, CDCl3) δ 0.85 (d, 3H), 0.92 (d, 3H), 1.4 (m, 1H), 1.6-1.8 (m, 2H), 2.55 (dd, 1H), 2.9 (dd, 1H), 3.65 (m, 1H), 3.92 (s, 3H), 3.95 (s, 3H), 7.0 (d, 1H), 7.32 (s, 1H), 7.5 (d, 1H). MS (APCI; Loop) m/z 348 (M+NH4)+, 331 (M+H)+.
- Step F: The hydroxylamine bound Wang resin (50 mg, 0.037 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethyl-aminopropyl)-3-ethylcarbodiimide hydrochloride (30 mg, 0.16 mmol) and a solution of the carboxylic acid from Step E in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours and worked up as described in Step A.
- Step G: The resin from Step F is treated with 1:1 dichloromethane/trifluoroacetic acid (2 mL) for 1.5 hours. The resin is filtered and washed with dichloro-methane (2×1 mL). The combined filtrates are concentrated in vacuo to provide 3-(3,4-dimethoxybenzenesulfonyl)-5-methylhexanoic acid hydroxyaride (9.8 mg). MS (H-isp; LCMS) m/z 363 (M+NH 4)+, 346 (M+H)+.
- The following hydroxamic compounds are synthesized using appropriate starting materials and following the steps of example 121:
- 5-(4-Butoxyphenyl)-3-(3,4-dimethoxybenzenesulfonyl)-pentanoic acid hydroxyaride.
- MS (APCI; LCMS) m/z 466 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)hexanoic acid hydroxyamide.
- MS (H-isp; LCMS) m/z 332 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-4-methylpentanoic acid hydroxyamide.
- MS (H-isp; LCMS) m/z 332 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-5-methylhexanoic acid hydroxyamide.
- MS (H-isp; LCMS) m/z 346 (M+H) +
- 3-(3-Benzyloxyphenyl)-3-(3,4-dimethoxybenzenesulfonyl)-N-hydroxypropionamide.
- MS (H-isp; LCMS) m/z 472 (M+H) +
- 3-(2-Benzyloxyphenyl)-3-(3,4-dimethoxybenzenesulfonyl)-N-hydroxypropionamide.
- MS (APCI; LCMS) m/z 472 (M+H) +
- 3-(3-Benzyloxy-4-methoxyphenyl)-3-(3,4-dimethoxybenzenesulfonyl)-N-hydroxypropionamide.
- MS (APCI; LCMS) m/z 502 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-N-hydroxy-3-(3-phenoxyphenyl)propionamide.
- MS (APCI; LCMS) m/z 458 (M+H) +
- 3-(3-(4-Chlorophenoxy)phenyl)-3-(3,4-dimethoxybenzenesulfonyl)-N-hydroxypropionamide.
- MS (H-isp; LCMS) m/z 492 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-N-hydroxy-3-(3-(4-methoxy-phenoxy)phenyl)propionamide.
- MS (H-isp; LCMS) m/z 488 (M+H) +
- 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-4-methylpentanoic acid hydroxyamide via 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)-methyl]-4-methylpentanoic acid.
- 1H NMR (300 MHz, CDCl3) δ 0.9-1.1 (2xd, 6H), 1.6 (m, 1H), 1.9 (m,1H), 2.35 (m, 1H), 3.55 (s, 3H), 3.7 (m, 1H), 3.9 (s, 3H), 4.3 (d, 1H), 6.6-7.5 (series m, 12H). MS (APCI; LCMS) m/z 500 (M+NH4)+, 483 (M+H)+ yields 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-4-methylpentanoic acid hydroxyamide (4.9 mg). MS (APCI; LCMS) m/z 515 (M+NH4)+, 498 (M+H)+.
- 2-[(3,4-Dimethoxybenzenesulfonyl)-(4-phenoxyphenyl)methyl]-N-hydroxy-4-(2-methoxyethoxy)butyramide.
- MS (APCI; LCMS) m/z 560 (M+H) +.
- 2-[(3,4-Dimethoxybenzenesulfonyl)-(4-phenoxyphenyl)methyl]-N-hydroxy-butyramide.
- MS (APCI; LCMS) m/z 486(M+H) +.
- 4-Benzenesulfonyl-2-[biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-N-hydroxybutyramide.
- MS (isp; Loop) m/z 610 (M+H) +.
- 2-[Biphenyl-4-yl-(3,4dimethoxybenzenesulfonyl)methyl]-N-hydroxy-4-phenyl-butyramide.
- MS (APCI; LCMS) m/z 546 (M+H) +.
- 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-N-hydroxy-4-(2-methoxy-ethoxy)-butyramide.
- MS (isp; Loop) m/z 544 (M+H) +.
- 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-N-hydroxybutyramide.
- MS (APCI; LCMS) m/z 470 (M+H) +.
- 2-[Biphenyl4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-4-methylpentanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 498 (M+H) +.
- 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-N-hydroxy-3-methyl-butyramide.
- MS (APCI; LCMS) m/z 484 (M+H) +.
- 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 588 (M+H) +.
- 2-[Biphenyl-4-yl-(3,4-dimethoxybenzenesulfonyl)methyl]-5-phenylpentanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 560 (M+H) +.
- 2-[(3,4-Dimethoxybenzenesulfonyl)-(4-phenoxyphenyl)methyl]-N-hydroxy-3-methyl-butyramide.
- MS (APCI; LCMS) m/z 500 (M+H) +.
- 2-[(3,4-Dimethoxybenzenesulfonyl)-(4-phenoxyphenyl)methyl]-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 604 (M+H) +.
- 3-(3,4-Dimethoxybenzenesulfonyl)-2-ethylhexanoic acid hydroxyamide.
- Modified procedure for Step C: Reaction temperature=60° C., Reaction time=2×20 hours.
- MS (APCI; LCMS) m/z 360 (M+H) +.
- 3-(3,4-Dimethoxybenzenesulfonyl)-2-(3-phenyl-propyl)hexanoic acid hydroxyamide.
- Modified procedure for Step C. Reaction temperature=60° C., Reaction time=2×20 hours.
- MS (APCI; LCMS) m/z 450 (M+H) +.
- 2-[(3-Benzyloxyphenyl)-(3,4-dimethoxybenzenesulfonyl)methyl]-5-phenylpentanoic acid hydroxyamide.
- Modified procedure for Step C. Reaction temperature=60° C., Reaction time=2×20 hours.
- MS (APCI; Loop) m/z 590 (M+H) +.
- Step A: The hydroxylamine bound Rink resin (0.1 g, 0.031 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethyl-aminopropyl)-3-ethylcarbodiimide hydrochloride (30 mg, 0.16 mmol) and a solution of the appropriate carboxylic acid prepared as in Example 73, Steps A-E in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours and worked up as described in Example 73, Step A.
- Step B: The resin from Step A (0.1 g, 0.031 mmol) is treated with 9:1 dichloromethane/trifluoroacetic acid (2 mL) for 1 hour. The resin is filtered and washed with dichloromethane (2×1 mL). The combined filtrates are concentrated in vacuo to provide the following hydroxamic acids:
- N-[2-(3,4-Dimethoxybenzenesulfonyl)-3-hydroxycarbamoyl-propyl]-N methyl-benzamide.
- MS (APCI; Loop) m/z 437 (M+H) +
- N-[2-(3,4-Dimethoxybenzenesulfonyl)-3-hydroxycarbamoyl-butyl]-N methyl-benzamide.
- MS (APCI; Loop) m/z 451 (M+H) +
- Methyl-phenyl-carbamic acid 3-(3,4-dimethoxybenzenesulfonyl)-4-hydroxycarbamoyl-butyl ester.
- MS (APCI; Loop) m/z 452 (M+H) +-15
- [3-(3,4-Dimethoxybenzenesulfonyl)-4-hydroxycarbamoyl-butyl]methyl-carbaic acid benzyl ester.
- MS (APCI; Loop) m/z 481 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)hexanedioic acid-1-hydroxyamide-6-(methyl-phenyl-amide).
- MS (APCI; Loop) m/z 451 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)heptanedioic acid-1-hydroxyamide-7-(methyl-phenyl-amide).
- MS (APCI; Loop) m/z 465 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-6-(1,3-dioxo-1,3-dihydro-isoindol-2-yl)hexanoic acid hydroxyamide. MS (APCI; Loop) m/z 477 (M+H) +
- 7-(3,4-Dihydro-2H-quinolin-1-yl)-3-(3,4-dimethoxybenzenesulfonyl)-7-oxo-heptanoic acid hydroxyamide.
- MS (APCI; Loop) m/z 491 (M+H) +
- 7-(3,4-Dihydro-2H-quinolin-1-yl)-3-(3,4-dimethoxybenzenesulfonyl)-6-oxo-hexanoic acid hydroxyamide.
- MS (APCI; Loop) m/z 477 (M+H) +
- 7-Benzo(1,3)dioxol-5-yl-3-(3,4-dimethoxybenzenesulfonyl)heptanoic acid hydroxyamide.
- MS (APCI; Loop) m/z 466 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-3-(thien-3-yl)-N-hydroxypropionamde.
- MS (APCI; Loop) m/z 372 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-5-phenylpentanoic acid hydroxyamide.
- MS (APCI; Loop) m/z 394 (M+H) +
- 3-(3,4-Dimethoxybenzenesulfonyl)-5-(3-phenoxyphenyl)pentanoic acid hydroxyamide.
- MS (APCI; Loop) m/z 486 (M+H) +
- 5-(4-Benzyloxyphenyl)-3-(3,4-dimethoxybenzenesulfonyl)pentanoic acid hydroxyamide.
- MS (APCI; Loop) m/z 500 (M+H) +
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy-phenyl]methyl}-4-methylpentanoic acid hydroxyamide.
- Step A: Wang resin (2 g, 1.5 mmol) is swelled in 20 mL of anhydrous DMF for 15 minutes. Then a solution of phosphonoacetic acid in DMF (1.13 g, 4.5 mmol) is added followed by pyridine (0.71 g, 9 mmol) and 2,6-dichloro-benzoyl chloride (0.94 g, 4.5 mmol). The mixture is agitated for 20 hours at room temperature. The resin is filtered and washed successively with DMF (3×), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c═o 1730 cm−1
- Step B: The loaded resin from Step A (0.5 g, 0.375 mmol) is swelled in anhydrous THF (5 mL) for 15 minute followed by the addition of a 0.5 M solution of potassium bis(trimethylsilyl)amide in toluene (2 mL) at 0° C. The mixture is allowed to warm up to room temperature and is shaken for 30 minutes. The solvent is drained to the top of the resin followed by the addition of anhydrous cyclohexane(10 mL) and the aldehyde (0.25 g, 1 mmol). The mixture is shaken for approximately 72 hours and worked up as described in Step A. IR (micro) u c═o 1704 cm −1
- Step C: To a solution of 3,4 dimethoxybenzenethiol (11.9 g, 70 mmol) in anhydrous THF (54.4 mL) at 0° C. is added a 2.5 M solution of n-butyllithium (5.6 mL, 14 mmol) and the solution is stirred at room temperature for 15 minutes.
- The resin from step B (0.2 g, 0.15 mmol) is swelled in anhydrous THF (2.5 mL) for 15 minutes and 4 mL of the above prepared 1 N thiol/thiolate stock solution is added. The mixture is shaken for approximately 100 hours and worked up as described in step A. The thiol addition does not go to completion, as evidenced by IR spectra (u c═o 1703 cm −1). The reaction is driven to completion by repeating the above procedure twice. IR (micro) u c═o 1731 cm−1
- Step D: The resin from Step C (0.2 g, 0.15 mmol) is swelled in dioxane (5 mL) for 15 minutes and a solution of m-chloroperoxybenzoic acid (0.44 g, 2.5 mmol) in 2 mL of dioxane is added. The mixture is shaken for 16 hours and worked up as described in step A.
- Step E: The resin from Step D (0.2 g, 0.15 mmol) is treated with 1:1 dichloro-methane/trifluoroacetic acid (3 mL) for 1-2 hours. The resin is filtered and washed with dichloromethane (2×1 mL). The combined filtrates are concentrated in vacuo to provide 2-{(3,4dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxyphenyl]methyl }-4-methylpentanoic acid (40 mg). 1H NMR (300 MHz, CDCl3) δ 0.7-1.1 (2xd, 6H), 1.55 (m, 1H), 1.85 (m, 1H), 2.35 (m, 1H), 3.65 (s, 3H), 3.85 (s, 3H), 4.18 (d, 1H), 4.9 (s, 2H), 6.6-7.4 (series of m, 11H). MS (H-isp; Loop) m/z 548 (M+NH4)+, 531 (M+H)+.
- Step F: The hydroxylamine bound Rink resin (0.1 g, 0.031 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (20 mg, 0.1 mmol) and a solution of the carboxylic acid from step 5 in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours and worked up as described in step A.
- Step G: The resin from Step F (0.1 g, 0.031 mmol) is treated with 9:1 dichloro-methane/trifluoroacetic acid (2 mL) for 1 hour. The resin is filtered and washed with dichloromethane (2×1 mL). The combined filtrates are concentrated in vacuo to provide 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy-phenyl]methyl}-4-methylpentanoic acid hydroxyamide (2.3 mg). MS (H-isp; LCMS) m/z 546 (M+H) +.
- The following hydroxamic compounds are synthesized using appropriate starting materials and following the steps of Example 162:
- 3-(3,4-dimethoxybenzenesulfonyl)-7-phenyl-2-(4-phenylbutyl)heptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 554 (M+H) +.
- 2-[1-(3-(3,4-dimethoxybenzenesulfonyl)-5-phenylpentyl]-N 1-hydroxy-N 4-methyl-N 4-phenylsuccinamide.
- MS (APCI; LCMS) m/z 568 (M) +
- 3-(3,4-dimethoxybenzenesulfonyl)-7-phenyl-2-(3-phenylpropyl)heptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 540 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-2-isopropyl-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 464 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-2-isobutyl-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 478 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-7-phenyl-2-propylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 464 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-7-phenyl-2-(4-phenyl-butyl)heptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 450 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-2-[2-(2-methoxyethoxy)ethyl]-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 524 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-2-benzenesulfonylethyl-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 590 (M+H) +.
- 3-(3,4-dimethoxybenzenesulfonyl)-7-phenyl-2-(5-phenylpentyl)heptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 568 (M+H) +.
- 4-Benzenesulfonyl-2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-N-hydroxy-butyramide.
- MS (APCI; LCMS) m/z 658 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-N-hydroxy-4-phenyl-butyramide.
- MS (APCI; LCMS) m/z 594 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-N-hydroxy-4-(2-methoxyethoxy)butyramide.
- MS (APCI; LCMS) m/z 592 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-N-hydroxy-butyramide.
- MS (APCI; LCMS) m/z 518 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-pentanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 532 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-4-methylpentanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 546 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-N-hydroxy-3-methylbutyramide.
- MS (APCI; LCMS) m/z 532 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-7-phenylheptanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 636 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-5-phenylpentanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 608 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-N 1-hydroxy-N 4-methyl-N 4-phenyl-succinimide.
- MS (APCI; LCMS) m/z 637 (M+H) +.
- 2-{(3,4-dimethoxybenzenesulfonyl)-[4-(4-fluorobenzyloxy)phenyl]methyl}-6-phenythexanoic acid hydroxyamide.
- MS (APCI; LCMS) m/z 622 (M+H) +.
- 3-(4-methoxybenzenesulfonyl)-3-(4-ethoxyphenyl)propionic acid hydroxyamide.
- Step A: Wang resin (20 g, 15 mmol) is swelled in 300 mL of anhydrous DMF for 15 minutes. Then a solution of diethyl phosphonoacetic acid (8.83 g, 45 mmol) in 50 mL of DMF is added followed by pyridine (7.12 g, 90 mmol) and 2,6-dichlorobenzoyl chloride (9.4 g, 45 mmol). The mixture is agitated for 20 hours at room temperature. The resin is filtered and washed successively with DMF (3×), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c═o 1738 cm−1
- Step B: The loaded resin from Step A (1 g; 0.63 mmol) is swelled in anhydrous THF (10 mL) for 15 minute followed by the addition of a 1 M solution of lithium bis(trimethylsilyl)amide in THF (1.6 mL; 1.57 equiv.) at 0° C. The mixture is allowed to warm up to room temperature and is shaken for 30 minutes. The solvent is then drained to the top of the resin followed by the addition of anhydrous cyclohexane (10 mL) and 4-ethoxy-benzaldehyde (0.5 g; 3.3 mmol). The mixture is shaken for approximately 72 hours. The resin is then filtered and washed successively with DMF (3×), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c═o 1709 cm−1
- Step C: To a solution of 4-methoxybenzene thiol (0.6 mL; 5 mmol) in anhydrous THF (1 mL) at 0° C. is added n-butyllithium (2.5 M in hexanes; 0.02 mL; 0.05 mmol) and the solution is stirred at room temperature for 15 minutes. The resin from step B (1 g; 0.63 mmol) contained in a polypropylene peptide synthesis cartridge is swelled in anhydrous THF (10 mL) for 15 minutes. The above-prepared 1 N thiol/thiolate stock solution is added. The mixture is shaken for approximately 100 hours. The resin is then filtered and washed successively with DMF (3×), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours. IR (micro) u c═o 1734 cm−1
- Step D: The resin from Step C (1 g, 0.63 mmol) is swelled in 1,4-dioxane (5 mL) for 15 minutes and a solution of m-chloroperoxybenzoic acid (0.863 g; 5 mmol) in 2 mL of 1,4-dioxane is added. The mixture is shaken for 16 hours, the resin is then filtered and washed successively with DMF (3+), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours.
- Step E: The resin from Step D (1 g, 0.63 mmol) is treated with 1:1 dichloromethane/trifluoroacetic acid (8 mL) for 1-2 hours. The resin is filtered and washed with dichloromethane (2×1 mL). The combined filtrates are concentrated in vacuo to provide 3-(4-methoxybenzenesulfonyl)-3-(ethoxy-phenyl)propionic acid (84 mg; 34%). 1H NMR (300 MHz, CDCl3-d3) δ 1.42 (t, J 9.0 Hz, 3H); 3.08 (dd, J=10.8 Hz, 1H); 3.44 (dd, J=7.2 Hz, 1H); 3.86 (s, 3H); 4.02 (q, J 9.0 Hz, 2H); 4.54 (dd, J=7.1 Hz, 1H); 6.72 (d, J=12.6 Hz, 2H); 6.82 (d, J=12.3 Hz, 2H); 6.98 (d, J=12.4 Hz, 2H); 7.42 (d, J=12.3 Hz, 2H); 7.52 (bs, 1H). MS (H-isp; LCMS); m/z=387 [M+Na]+, 382 [M+NH4]+, 365 [M+H]+.
- Step F: The hydroxylamine bound Rink resin (200 mg, 0.04 mmol) is swelled in anhydrous DMF (1 mL) for 15 minutes followed by the addition of 1-(3-dimethyl-aminopropyl)-3-ethylcarbodiimide hydrochloride (38 mg, 0.2 mmol) and a solution of the carboxylic acid from step 5 (84 mg; 0.2 mmol) in 1 mL of anhydrous DMF. The mixture is shaken for 20 hours. The resin is then filtered and washed successively with DMF (3×), H 2O (3×), DMF (3×), THF (10×) and Et2O (10×) followed by drying in vacuo at 40° C. for 20 hours.
- Step G: The resin from Step F (200 mg; 0.04 mmol) is treated with 1:1 dichloromethane/trifluoroacetic acid (3 mL) for 30 minutes. The resin is filtered and washed with dichloromethane (2×1 mL). The combined filtrates are concentrated in vacuo to provide 3-(4-methoxybenzenesulfonyl)-3-(4-ethoxyphenyl)propionic acid hydroxyamide (9.6 mg). MS (H-isp; LCMS); m/z=402 [M+Na] +, 380 [M+H]+.
- The following hydroxamic compounds are synthesized using appropriate starting materials and following the steps of Example 184.
- 3-(4-methoxybenzenesulfonyl)-3-(4-biphenyl)propionic acid hydroxy amide)
- MS (H-isp; LCMS); m/z=412 [M+H] +. A %=89% @ 220 nm
- 3-(4-methoxybenzenesulfonyl)-3-(4-phenoxyphenyl)propionic acid hydroxy amide
- MS (H-isp; LCMS); m/z=428 [M+H] +. A %=75% @ 220 nm
- 3-(4-methoxybenzenesulfonyl)-3-(4-benzyloxyphenyl)-propionic acid hydroxy amide
- MS (H-isp; LCMS); m/z=442 [M+H] +. A %=60% @ 220 nm
- 3-(4-methoxybenzenesulfonyl)-3-(4-fluorobenzyloxyphenyl)-propionic acid hydroxy amide
- MS (H-isp; LCMS); m/z=460 [M+H] +. A %=68% @ 220 nm
- 3-(4-methoxybenzenesulfonyl)-3-(4-(3-trifluoromethylphenoxy)-phenyl-propionic acid hydroxy amide
- MS (H-isp; LCMS); m/z=496 [M+H] +. A %=74% @ 220 nm
- The following examples are prepared using the process illustrated in Scheme 15:
-
- To a suspension of the hydroxylamine resin (0.5 g, 0.81 mmol, loading 1.62 mmol/g) in NMP (4 ml) and trimethylorthoformate (4 ml) is added 2-(2′-bromobenzoxy)benzaldehyde (0.71 g, 2.43 mmol) in NMP (4 ml). The suspension is agitated overnight. The mixture is filtered and washed with NMP (×3), THF (×3) and DCM (×3). The resin is dried in vacuo overnight.
-
- The resin (0.089 g, 100 μmol, loading 1.12 mmol/g) is swelled in dry benzene (2.5 ml) with gentle agitation for 15 minutes. To the suspension is added tributyltin hydride (0.40 ml, 1.5 mmol) and AIBN (0.008 g, 5 μmol) and the solution is refluxed overnight. The mixture is cooled, filtered and washed with THF (×3), THF:H 2O (3:1, ×3), MeOH (×3), THF (×3) and CH2Cl2 (×3). The resin is dried in vacuo overnight.
- Trifluoroacetic acid (1 ml) and CH 2Cl2 (1 ml) are added and the mixture is shaken for 1 hour. The solution is filtered into a tared vial, the resin was washed with CH2Cl2 (×3). The solvent is removed in vacuo to N-(6,11-Dihydro-dibenzo[b,e]oxepin-11-yl)-hydroxylamine (0.0256 g, quantitative). LCMS gives 227 [(M)+, 100%].
-
- To a suspension of the hydroxylamine resin (1.0 g, 1.62 mmol, loading 1.62 mmol/g) in NMP (8 ml) and trimethylorthoformate (8 ml) is added 2-(2′-bromo-2′-propenoxy)benzaldehyde (1.17 g, 4.86 mmol) in NMP (8 ml). The suspension is agitated overnight. The mixture is filtered and washed with NMP (×3), THF (×3) and DCM (×3). The resin is dried in vacuo overnight.
-
- The resin (0.084 g, 100 μmol, loading 1.19 mmol/g) is swelled in dry benzene (2.5 ml) with gentle agitation for 15 minutes. To the suspension is added tributyltin hydride (0.40 ml, 1.5 mmol) and AIBN (0.008 g, 5 μmol) and the solution is refluxed overnight. The mixture is cooled, filtered and washed with THF (×3), THF:H 2O (3:1, ×3), MeOH (×3), THF (×3) and CH2Cl2 (×3). The resin is dried in vacuo overnight. Trifluoroacetic acid (1 ml) and CH2Cl2 (1 ml) were added and the mixture is shaken for 1 hour. The solution is filtered into a tared vial, the resin is washed with DCM (×3). The solvent is removed in vacuo to yield N-(3-Methylene-chroman-4-yl)-hydroxylamine (0.0115 g, 65%). LCMS gives 177 [(M)+, 100%].
- The following chemical library was produced according to Scheme 15
- The Library was produced utilizing the IRORI Accutag-10000 Combinatorial Chemistry system. The Library was generated in an 18×4×8×18 matrix.
- Step 1: N-Akylation
- The appropriate MicroKans (576 per reaction, 14.69 mmoles) are sorted into 1 L erlemyer flasks. Dry DMF (570 mL) is added. The Diazabicycloundecane (21.95 mL, 146.8 mmoles) is added. The reaction flasks are covered with aluminum foil and placed into an orbital shaker and agitated (100 rpm) for one hour at ambient temperature. At the end of this period, the appropriate alkyl halide (176.2 mmoles) and KI (cat., 2 grams) are added. The reaction flasks are placed back into the orbital shaking oven, which is now set to 60° C., and shaken (100 rpm) overnight at 60° C. At the end of this period, the reactions are allowed to cool to room temperature. The reaction mixture is drained. The reaction mixtures are washed individually in the following sequence: Wash with DMF, agitate for 10 minutes and drain (repeat 2×). Wash with MeOH, agitate for 10 minutes and drain. Wash with THF, agitate for 10 minutes and drain (repeat 1×). Wash with anhydrous DMF, agitate for 10 minutes and drain (repeat 1×).
- After this washing protocol, more dry DMF (570 mL) is added. The Diazabicycloundecane (21.95 mL, 146.8 mmoles) is added. The reaction flasks are covered with aluminum foil and placed into an orbital shaker and agitated (100 rpm) for one hour at ambient temperature. At the end of this period, the appropriate alkyl halide (176.2 mmoles) and KI (cat., 2 grams) are added. The reaction flasks are placed back into the orbital shaking oven, which is now set to 60° C. the flasks are shaken (100 rpm) overnight at 60° C. At the end of this period, the reactions are allowed to cool to room temperature. The :o reaction mixture is drained. The reaction mixtures are washed individually in the following sequence: Wash with DMF, agitate for 10 minutes and drain (repeat 1×). Wash with MeOH, agitate for 10 minutes and drain. The MicroKans are randomly combined into two 10 L three neck round bottom flasks and washed in the following sequence: THF (2×5 l), and MeOH (5 l ) & DCM, alternating (2×51), Rinse with THF twice.
- Step 2: Alloc Deprotection
- The MicroKANS are randomly placed into two 12 L three neck round bottom flasks (approximately 5,184 per flask, 77.76 g of resin, 132.3 mmoles). The THF (2.5 l) and DMSO (2.5 l) are added. Each reaction flask is fitted with an overhead stirrer. Stirring is initiated. The morhpholine (288.2 mL; 3.30 mol), tetrakis(triphenylphosphine)palladium(0) (45.82 g; 0.039) and 0.5 N aqueous hydrochloric acid (158.6 mL; 0.5 N) are added in turn. After stirring for 14 hours, a small portion of resin is removed from one of the MicroKANs from each flask and checked by IR to confirm disappearance of the carbamate absorbance. Since both samples show disappearance of this diagnostic peak, the reactions are processed. The reaction solvent is drained. The reactions are washed individually according to the following procedure. Add DMF (5 l). Stir for approximately 20 min and drain. Repeat 2×. Add THF (5 l). Stir for approximately 20 min and drain. Add dichloromethane (5 l). Stir for approximately 20 min and drain. Add dichloromethane (5 l) followed by concentrated aqueous hydrochloric acid (25 ml). Stir for approximately 20 min and drain. Add a solution of 0.5% sodium diethyldithiocarbamate in DMF (5 l). Stir for approximately 20 min and drain. Add DMF (5 l). Stir for approximately 20 min and drain. Repeat 1×. Add MeOH (5 l). Stir for approximately 20 min and drain. Add THF (5 l). Stir for approximately 20 min and drain. Repeat 1×. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Repeat 1×. Add diethylether (5 l). Stir for approximately 20 min. and drain. Repeat 1×. After the final washing the MicroKANs are dried by blowing a stream of nitrogen through the flask with intermittent agitation. After sufficient drying, the MicroKANs are sorted for the next reaction.
- Step 3: Amide Bond Formation
- The appropriate MicroKans (2592 per reaction, 66.10 mmoles) are sorted into 5 L 3-neck round bottom flasks. Dry DMF (2.5 L) is added. The reaction flasks are fitted with an overhead stirrer. The acetylsalicylic acid (119.1 g, 661 mmoles) is added and stirring initiated. After about 15 minutes, the EDCI (126.7 g, 661 mmoles) is added, and the reaction mixture is stirred for 60 hours. At the end of this period, the reaction mixture is drained. DMF (2.5 L) is added to the reaction flask. After stirring for 15 minutes, the reaction flasks are drained. This is repeated, and the MicroKans are randomly combined into two 12 l three neck round bottom flasks. The MicroKans are washed according to the following protocol. Add DMF (5 l). Stir for approximately 20 min and drain. Add MeOH (5 l). Stir for approximately 20 min and drain. Repeat 1×. Add THF (5 l). Stir for approximately 20 min and drain. Repeat 2×. Add MeOH (5 l). Stir for approximately 20 min. and drain. Repeat 1×. Add DMF (5 l). Stir for approximately 20 min and drain. Repeat 1×.
- Step 4: Deacteylation
- The above reaction flasks containing the Microkans are charged with a solution of 20% piperidine in DMF (5 L). After stirring for 15 hours, the reaction mixtures are drained and washed according to the following protocol. Add DMF (5 l). Stir for approximately 20 min and drain. Repeat 1×. Add THF (5 l). Stir for approximately 20 min and drain. Repeat 1×. Add MeOH (5 l). Stir for approximately 20 min and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add MeOH (5 l). Stir for approximately 20 min and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add diethylether (5 l). Stir for approximately 20 min. and drain. Repeat 1×. After the final washing the MicroKANs are dried by blowing a stream of nitrogen through the flask with intermittent agitation. After sufficient drying, the MicroKANs are sorted for the next reaction.
- Step 5: Phenol alkylation
- The appropriate MicroKans (1296 per reaction, 33.05 mmoles) are sorted into 2 L Erlemyer flasks. Anhydrous DMF (1.2 L) and DBU (74.11 ml, 495,6 immoles) are added. Hand swirl briefly. The reaction flasks are placed in the Shaker oven and agitated at RT for one hour. At the end of this period, the Cesium Carbonate (flasks 1-4, 6 and 8) and Potassium Carbonate (flasks 5 and 7) are added to the reaction flasks, which are yhrn hand swirled briefly. Then the appropriate halo-ester is added and the flask is hand swirled briefly, sfter which the flasks are replaced in the shaker oven. The oven is heated to 60° C., and the flasks are agitated for 15 hours. At the end of this period, the reactions are allowed to cool and then drained. They are washed individually according to the following protocol. Add DMF (1 l). Hand agitate briefly and drain. Repeat 2×. Add DMF:water (IL, 1:1). Hand agitate briefly and drain. Add water (1 l). Hand agitate briefly and drain. Repeat 2×. Add DMF (1 l). Hand agitate briefly and drain. Add THF (1 l). Hand agitate briefly and drain. Repeat 1×. Add anhydrous DMF (1 l). Hand agitate briefly and drain. Repeat 1×.
- After this washing protocol, more dry DMF (1.2 L) and DBU (74.11 ml, 495,6 mmoles) are added. The reaction flasks are hand swirled briefly and placed in the Shaker oven and agitated at room temperature for one hour. At the end of this period, the Cesium Carbonate (flask 1-4, 6 and 8) and Potassium Carbonate (flasks 5 and 7) are added to the reaction flasks, whichare then hand swirled briefly. The appropriate halo-esteris added and the flasks are hand swirled briefly, and then replaced in the shaker oven. The oven is heated to 60° C., and agitation is continued for 15 hours, at the end of which period the reaction flasks are allowed to cool and drained. They are washed individually according to the following protocol. Add DMF (1 1). Hand agitate briefly and drain. Repeat 2×. Add DMF:water (1 L, 1:1). Hand agitate briefly and drain. Repeat 1×. The MicroKans are randomly combined into two 10 L three neck round bottom flasks, and washed in the following sequence: Add DMF (5 l). Stir for approximately 20 min and drain. Add THF (5 l). Stir for approximately 20 min and drain. Repeat 1×. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add diethylether (5 l). Stir for approximately 20 min. and drain. Repeat 1×. After the final washing, the MicroKANs are dried by blowing a stream of nitrogen through the flask with intermittent agitation. After sufficient drying, the MicroKANs are sorted for the next reaction.
- Step 6: Ester Cleavage
- The appropriate MicroKans (2448 per reaction, 62.42 mmoles) are sorted into four 5 L 3-neck round bottom flasks. Each flask is charged with THF (1.5 L). The methanol (0.75 L) is then added. The reaction flasks are fitted with an overhead stirring apparatus. After stirring for 10 minutes, the aqueous solution of lithium hydroxide (1.5 mol; 750 mL: 2.0 M) is added and stirring continued for 15 hours. At the end of this period, the reaction flasks are drainedand washed individually according to the following protocol. Add THF (1.5 l). Stir for approximately 20 min and drain. Repeat 1×. Add MeOH (1.5 l). Stir for approximately 20 min. and drain. Repeat 1×. Add DMF (1.5 l). Stir for approximately 20 min and drain. Repeat 1×. Add DMF:water (1.5L, 1:1). Stir for approximately 20 min and drain. Repeat 1×. Add DMF (1.5 l). Stir for approximately 20 min and drain. Repeat 1×. Add THF (1.5 l). Stir for approximately 20 min and drain. Repeat 1×. Add dichloromethane (1.5 1). Stir for approximately 20 min. and drain. Add MeOH (1.5 l). Stir for approximately 20 min. and drain. Add dichloromethane (1.5 l). Stir for approximately 20 min. and drain. Add MeOH (1.5 l). Stir for approximately 20 min. and drain. Add dichloromethane (1.5 l). Stir for approximately 20 min. and drain. Add diethylether (1.5 l). Stir for approximately 20 min. and drain. Repeat 1×. After the final washing, the MicroKANs are dried by blowing a stream of nitrogen through the flask with intermittent agitation. After sufficient drying, the MicroKANs are sorted for the next reaction.
- Step 7: Amide Bond Formation
- The appropriate MicroKans (576 per reaction, 14.69 mmoles) are sorted into 2 L Erlenmeyer flasks. Dry DMF (570 mL) is added. The EDCI (28.16 g, 146.9 mmoles) is addedand the flasks swirled by hand briefly. Then HOBt (19.85 g, 146.9 mmoles) is added and the flasks are swirled by hand briefly, followed by addition of the appropriate amine (132.2 mmoles). Then the flasks are hand swirled briefly,and replaced in the shaker oven, where they are agitated for 15 hours at room temperature. At the 1:0 end of this period, the reaction flasks are drained and then washed individually according to the following protocol. Add DMF (500 ml). Hand agitate briefly and drain. Repeat 2×. Add methanol (500 ml) Hand agitate briefly and drain. Repeat 1×. The MicroKans are randomly combined into two 10 L three neck round bottom flasks and washed in the following sequence: Add THF (5 l). Stir for approximately 20 min. and drain. Repeat 1×. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add dichloromethane (5 l). Stir for approximately 20 min. and drain. Add MeOH (5 l). Stir for approximately 20 min. and drain. Add diethylether (5 l). Stir for approximately 20 min. and drain. Repeat 1×. After the final washing, the MicroKANs are dried by blowing a stream of nitrogen through the flask with intermittent agitation. After sufficient drying, the MicroKANs are sorted for the cleavage process.
- Step 8. Cleavage
- The MicroKANs are sorted into individual wells of IRORI AccuCleave 96 cleavage stations. Each well is charged with a TFA: dichloromethane mixture (1:1, 1200 mL). After agitating for approximately forty minutes, the reaction wells are drained into 2 mL microtubes in an 96-well format. The reaction wells are again charged with dichloromethane (600 mL). After manual agitation, this too is drained into the 2 mL microtubes in an 96-well format. The cleavage cocktail is removed in vacuo using a Savant Speedvac. The concentrated products from the cleavage mother plates are reconstituted with THF and transferred into two daughter plates utilizing a Packard MultiProbe liquid handler. The daughter plates are concentrated in vacuo utilizing a GeneVac centrifuge evaporator. Examples are listed below as follows:
Structure Mass Spec % Purity (ELS) 503.69 99.5 462.63 99.5 420.55 99.3 449.55 99 398.5 98.7 407.56 98.7 323.39 98.3 421.58 96.8 522.69 95.1 455.55 94.2 420.55 94.1 490.4 93.5 441.57 93.5 455.55 93.2 337.42 93.2 440.59 93.1 379.5 92.9 556.75 92.8 441.57 92.4 477.65 91.9 365.47 91.7 406.52 91.4 433.59 90.8 476.62 89.2 476.02 88.2 - The energy dispersive x-ray measurements are made with an Electroscan Scanning Electron Microscope with an attached PGT digital detector. The beads are mounted on aluminum stubs and tested without a conductive coating. The net x-ray counts are reported after correction for the background. No corrections are made for atomic number, fluorescence or absorption.
Claims (109)
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| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US10/107,771 US6710208B2 (en) | 1996-12-19 | 2002-03-27 | Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and α,β-unsaturated carboxylic acid and aldehyde compounds |
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| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US3245396P | 1996-12-19 | 1996-12-19 | |
| US3388196P | 1996-12-24 | 1996-12-24 | |
| PCT/US1997/000264 WO1997024117A1 (en) | 1996-01-02 | 1997-01-02 | Substituted (aryl, heteroaryl, arylmethyl or heteroarylmethyl) hydroxamic acid compounds |
| US08/928,943 US6057369A (en) | 1996-01-02 | 1997-09-12 | Substituted (aryl, heteroaryl, arylmethyl or heteroarylmethyl) hydroxamic acid compounds |
| PCT/US1997/023920 WO1998029376A1 (en) | 1996-12-19 | 1997-12-17 | Process for the solid phase synthesis of aldehydes, ketones, oximes, amines and hydroxamic acid compounds |
| US09/103,872 US6133409A (en) | 1996-12-19 | 1998-06-24 | Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and αβ-unsaturated carboxylic acid and aldehyde compounds |
| PCT/US1999/014251 WO1999067192A2 (en) | 1998-06-24 | 1999-06-23 | PROCESS FOR THE SOLID PHASE SYNTHESIS OF ALDEHYDE, KETONE, OXIME, AMINE, HYDROXAMIC ACID AND α,β-UNSATURATED CARBOXYLIC ACID AND ALDEHYDE COMPOUNDS |
| US09/469,829 US6392010B1 (en) | 1996-12-19 | 1999-12-22 | Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and αβ-unsaturated carboxylic acid and aldehyde compounds |
| US10/107,771 US6710208B2 (en) | 1996-12-19 | 2002-03-27 | Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and α,β-unsaturated carboxylic acid and aldehyde compounds |
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| US09/469,829 Division US6392010B1 (en) | 1996-12-19 | 1999-12-22 | Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and αβ-unsaturated carboxylic acid and aldehyde compounds |
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| US10/107,771 Expired - Fee Related US6710208B2 (en) | 1996-12-19 | 2002-03-27 | Process for the solid phase synthesis of aldehyde, ketone, oxime, amine, hydroxamic acid and α,β-unsaturated carboxylic acid and aldehyde compounds |
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| GB9916575D0 (en) * | 1999-07-15 | 1999-09-15 | Cambridge Combinatorial Ltd | Solid phase nitrile synthesis |
| KR20030078069A (en) * | 2001-01-12 | 2003-10-04 | 아머샴 피엘시 | Perfluoro Sulfonyl Halides and Related Species as Polymer Support Modifiers |
| US6608196B2 (en) * | 2001-05-03 | 2003-08-19 | Galileo Pharmaceuticals, Inc. | Process for solid supported synthesis of pyruvate-derived compounds |
| US20040213788A1 (en) * | 2001-05-18 | 2004-10-28 | Sweet Raymond W. | Anti-rank ligand monoclonal antibodies useful in treatment of rank ligand mediated disorders |
| US7098241B2 (en) * | 2002-12-16 | 2006-08-29 | Hoffmann-La Roche Inc. | Thiophene hydroxamic acid derivatives |
| US7019019B2 (en) * | 2002-12-23 | 2006-03-28 | Dendreon Corporation | Matriptase inhibitors and methods of use |
| US20070021612A1 (en) * | 2004-11-04 | 2007-01-25 | University Of Notre Dame Du Lac | Processes and compounds for preparing histone deacetylase inhibitors and intermediates thereof |
| US7235688B1 (en) | 2004-11-04 | 2007-06-26 | University Of Notre Dame Du Lac | Process for preparing histone deacetylase inhibitors and intermediates thereof |
| EP3110429A4 (en) | 2014-02-27 | 2018-02-21 | Lycera Corporation | Adoptive cellular therapy using an agonist of retinoic acid receptor-related orphan receptor gamma & related therapeutic methods |
| CA2947290A1 (en) | 2014-05-05 | 2015-11-12 | Lycera Corporation | Tetrahydroquinoline sulfonamide and related compounds for use as agonists of rory and the treatment of disease |
| EP3209641A4 (en) | 2014-05-05 | 2018-06-06 | Lycera Corporation | Benzenesulfonamido and related compounds for use as agonists of ror and the treatement of disease |
| CA2982847A1 (en) | 2015-05-05 | 2016-11-10 | Lycera Corporation | Dihydro-2h-benzo[b][1,4]oxazine sulfonamide and related compounds for use as agonists of ror.gamma. and the treatment of disease |
| CN107980042B (en) | 2015-06-11 | 2021-10-08 | 莱斯拉公司 | Aryldihydro-2H-benzo[b][1,4]oxazinesulfonamides and related compounds for use as RORγ agonists and for the treatment of disease |
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| US4859736A (en) | 1987-03-30 | 1989-08-22 | Ciba-Geigy Corporation | Synthetic polystyrene resin and its use in solid phase peptide synthesis |
| US5783682A (en) | 1990-07-27 | 1998-07-21 | Isis Pharmaceuticals, Inc. | Oligonucleotide mimics having nitrogen-containing linkages |
| JP3882200B2 (en) | 1994-12-28 | 2007-02-14 | イー・アイ・デユポン・ドウ・ヌムール・アンド・カンパニー | Process for producing 5-chloro-2,3-dihydro-1H-inden-1-one |
| GB9503749D0 (en) | 1995-02-24 | 1995-04-12 | British Biotech Pharm | Synthesis of hydroxamic acid derivatives |
| ES2217386T3 (en) | 1996-01-02 | 2004-11-01 | Aventis Pharmaceuticals Inc. | ACID COMPOUNDS (ARIL, HETEROARIL, ARILMETIL OR HETEROARILMETIL) REPLACED HYDROXAMIC. |
| RU99104137A (en) | 1996-08-05 | 2001-01-20 | Пролинкс | COMPLEX-FORMING REAGENTS FOR WOOD-CONTAINING COMPOUNDS AND COMPLEXES BASED ON THEM |
| US6541276B2 (en) | 1996-10-28 | 2003-04-01 | Versicor, Inc. | Methods for solid-phase synthesis of hydroxylamine compounds and derivatives and combinatorial libraries thereof |
| US6281245B1 (en) | 1996-10-28 | 2001-08-28 | Versicor, Inc. | Methods for solid-phase synthesis of hydroxylamine compounds and derivatives, and combinatorial libraries thereof |
| BR9713773A (en) | 1996-12-19 | 2000-03-21 | Rhone Poulenc Rorer Pharma | Processes for the preparation of a ketone compound, an aldehyde compound, a n-alkylated hydroxamic acid polymeric resin compound, a hydroxamic acid compound, an oxime ether polymeric resin compound, a <244> -amine, a lactone compound, a <244> -cyclic amino compound, and non-protected hydroxylamine polymeric resin compounds, and tetrafluorophenyl hydroxylamine |
| CO5011072A1 (en) | 1997-12-05 | 2001-02-28 | Lilly Co Eli | ETANOLAMINAS PIRAZINIL SUBSTITUTED AS AGFONISTS OF THE RECEPTORS |
| WO1999041216A1 (en) | 1998-02-17 | 1999-08-19 | Chembridge Corporation | Supports for solid state chemical reactions and method of use thereof |
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| US6392010B1 (en) | 2002-05-21 |
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