US11800871B2 - Paenibacillus elgii AM-67 strain and biopesticide composition containing same - Google Patents
Paenibacillus elgii AM-67 strain and biopesticide composition containing same Download PDFInfo
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- US11800871B2 US11800871B2 US16/789,942 US202016789942A US11800871B2 US 11800871 B2 US11800871 B2 US 11800871B2 US 202016789942 A US202016789942 A US 202016789942A US 11800871 B2 US11800871 B2 US 11800871B2
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- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims abstract description 38
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- 235000000536 Brassica rapa subsp pekinensis Nutrition 0.000 claims abstract description 35
- 241000499436 Brassica rapa subsp. pekinensis Species 0.000 claims abstract description 35
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Images
Classifications
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N63/00—Biocides, pest repellants or attractants, or plant growth regulators containing microorganisms, viruses, microbial fungi, animals or substances produced by, or obtained from, microorganisms, viruses, microbial fungi or animals, e.g. enzymes or fermentates
- A01N63/20—Bacteria; Substances produced thereby or obtained therefrom
- A01N63/25—Paenibacillus
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/20—Bacteria; Culture media therefor
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/20—Bacteria; Culture media therefor
- C12N1/205—Bacterial isolates
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
- C12R2001/00—Microorganisms ; Processes using microorganisms
- C12R2001/01—Bacteria or Actinomycetales ; using bacteria or Actinomycetales
Definitions
- the present disclosure relates to novel Paenibacilius elgii AM-67 strain having antibacterial activity on phytobacterial pathogens causing Chinese cabbage soft rot disease, and an environmentally friendly biopesticide containing the same.
- Chinese cabbage Brassica campestris subsp. napus var pekinensis
- kimchi is a biennial plant belonging to Cruciferae, which is used as the main ingredient of kimchi, and is one of the highly produced and consumed vegetables in Korea.
- kimchi has been recognized for its food and nutritional value, and thus is growing in demand not only in the Korean domestic market but also in the world market.
- Chinese cabbage is a cryophilic vegetable that likes the cool climate; and in a case where Chinese cabbage grows above 20° C. that is an optimum growth temperature, the Chinese cabbage is affected in terms of head formation and appearance of bacteria ( Erwinia carotovora subsp.
- carotovora is a bacterial disease that causes damage to various vegetables, including Chinese cabbage, radish, potato, carrot, and the like.
- the Chinese cabbage soft rot disease is a bacterial soil disease that has a very low chemical controlling effect, and thus prophylactic application must be done.
- Various methods are used to control bacterial soft rot diseases.
- chemical controlling is mainly used due to the very high cost of soil fumigation.
- chemical pesticides kill other useful soil microorganisms as well; and use of agricultural antibiotics results in emergence of resistant bacteria, thereby causing a variety of problems.
- Biopesticides which are environmentally friendly controlling agents, do not cause these problems, and have safety and little toxicity to human and livestock.
- the biopesticides utilize microorganisms widely present in nature, and thus may minimize problems of ecosystem disturbance.
- Recently, development of environmentally friendly microbial pesticides has been spurred, and many attempts have been made.
- the result is merely a composition using a culture solution.
- novel Bacillus sp. microorganism having effect of protection on Chinese cabbage bacterial soft-rot disease Korean Patent No. 580336
- novel Streptomyces sp. strain with quorum sensing inhibition activity Korean Patent No.
- Another aspect is a method including designating a strain, which is obtained through total genomic analysis and consists of a total chromosome length of 8,072,494 bp, as Paenibacillus elgii AM-67, and depositing the strain with Korea Research institute of Bioscience and Biotechnology on Jan. 23, 2018 under Accession No. KCTC 13466BP; and a step of identifying, with a culture composition obtained from culture using the isolated strain of the present disclosure and a crude extract thereof, its antibacterial activity on Erwinia bacteria causing Chinese cabbage soft rot disease, and evaluating its use as an environmentally friendly biological material.
- Another aspect is a controlling method in which soil or plants are treated with controlling agents for Chinese cabbage soft rot disease and similar soft rot diseases through various formulation schemes using the strain and its culture solution or an extract thereof.
- At least one of the disclosed embodiments provides an excellent effect from the viewpoint of providing novel Paenibacillus elgii AM-67 strain that controls Chinese cabbage soft rot disease, and a hiopesticide containing the same.
- FIG. 1 illustrates a diagram showing taxonomic classification obtained by 16s rRNA sequencing for identification of the novel microbial strain of the present disclosure.
- FIG. 2 illustrates a genetic map of the novel microbial strain of the present disclosure.
- FIG. 4 illustrates pictures showing antibacterial control activity of microbial strain of the present disclosure using the disk diffusion method.
- the present disclosure relates to biological control against Erwinia sp. causing a bacterial rot disease that is Chinese cabbage blight, using the isolated strain Paenibacillus elgii AM-67 (Accession No. KCTC 13466BP).
- the gene of the newly isolated strain of the present disclosure is related to a novel microbial Paenibacillus elgii AM-67 strain, having a chromosomal nucleotide sequence consisting of a total length of 8,042,494 bp, and a biopesticide containing the same controls soil microorganism-induced Chinese cabbage soft rot disease caused by infection through the roots during a growth period for Chinese cabbage cultivation, so that the Chinese cabbage soft rot disease is effectively controlled in a case where the biopesticide is applied on the Chinese cabbage field.
- a biopesticide containing a culture composition which contains the Paenibacillus elgii AM-67 strain, and/or an extract thereof provides an environmentally friendly biopesticide material that enables environmentally friendly cultivation.
- Some embodiments of the present disclosure provide Paenibacillus elgii ANI-67 (KCTC 13466BP), its culture composition, and a crude extract thereof, which control Chinese cabbage soft rot disease.
- KCTC 13466BP Paenibacillus elgii ANI-67
- inventions of the present disclosure provide a basis for control activity of a culture composition on Erwinia causing Chinese cabbage soft rot disease, the culture composition containing, as an active ingredient, the microorganism of the present disclosure, its culture solution, or a crude extract thereof.
- soil samples were suspended and diluted in sterile physiological saline, inoculated in LB agar medium, and cultured at 30° C. for 2 days, so that isolation of microorganisms was performed.
- Table 2 shows CDS, tRNA, and rRNA which have been completed from sequencing based on genomic data analysis for the strain of the present disclosure, and the final completed genetic map is illustrated in FIG. 2 .
- the microbial Paenibacillus elgii AM-67 strain of the present disclosure was cultured at 30° C. for 3 days in a medium supplemented with 3% glucose, 3% yeast extract, and 5% NaCl. Then, the culture supernatant was taken, and antibacterial control activity thereof was identified using the disk diffusion method generally known for Erwinia causing Chinese cabbage soft rot disease. 100 ⁇ L of the culture supernatant of Paenibacillus elgii AM-67 strain of the present disclosure was loaded on each test disk and drying was performed. Then, the disk was placed on a medium smeared with Erwinia causing Chinese cabbage soft rot disease, and examined for antibacterial activity level thereof.
Abstract
Description
TABLE 1 |
Summary of assembly |
Contig | Total | Max | Min | Avg | |
Name | Length | N50 | Length | | Length |
contig | |||||
1 | 8,042,494 | 8,042,494 | 8,042,494 | 8,042,494 | 8,042,494 |
[Note] | |||||
Number of Contigs: The number of contigs assembled. | |||||
Total Length: The total length of contigs. | |||||
N50: 50% of all bases come from contigs longer than this value. | |||||
Max Length: The length of maximum contig. | |||||
Mm Length: The length of minimum contig. | |||||
Avg Length: The average length of contigs assembled. |
TABLE 2 |
7,369 CDS, 96 tRNA, 30 rRNA genes were |
discovered in present disclosure |
Contig Name | Length (bp) | CDS | tRNA | rRNA | |
contig 1 | 8,042,494 | 7,369 | 96 | 30 | |
Total | 8,042,494 | 7,369 | 96 | 30 | |
[Note] | |||||
Length (bp): The number of bases in each contig | |||||
CDS: Coding Sequence | |||||
tRNA: Transfer RNA, tRNA has triplet nucleotide sequence complementary to the triplet nucleotide coding sequences of messenger RNA (mRNA) | |||||
rRNA: Ribosomal RNA, a molecular component of ribosome |
Claims (2)
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
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KR20180007953 | 2018-01-22 | ||
KR10-2018-0007953 | 2018-01-22 | ||
KR10-2018-0010792 | 2018-01-29 | ||
KR1020180010792A KR102012583B1 (en) | 2018-01-22 | 2018-01-29 | Novel Paenibacillus elgii AM-67 and echo-freindly agro-chemicals for controlling soft-root disease of chinese cabage comprising of the same |
PCT/KR2018/001253 WO2019142963A1 (en) | 2018-01-22 | 2018-01-29 | Novel paenibacillus elgii am-67 strain and environmentally friendly biopesticide composition containing same for controlling chinese cabbage soft rot disease, erwinia.sp. |
Related Parent Applications (1)
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PCT/KR2018/001253 Continuation WO2019142963A1 (en) | 2018-01-22 | 2018-01-29 | Novel paenibacillus elgii am-67 strain and environmentally friendly biopesticide composition containing same for controlling chinese cabbage soft rot disease, erwinia.sp. |
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US20200187508A1 US20200187508A1 (en) | 2020-06-18 |
US11800871B2 true US11800871B2 (en) | 2023-10-31 |
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KR (1) | KR102012583B1 (en) |
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CN111172065B (en) * | 2020-01-06 | 2022-06-24 | 河南新仰韶生物科技有限公司 | High-yield paenibacillus polymyxa and application thereof |
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- 2018-01-29 KR KR1020180010792A patent/KR102012583B1/en active IP Right Grant
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2020
- 2020-02-13 US US16/789,942 patent/US11800871B2/en active Active
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Chung et al., The Korean Journal of Pesticide Science, vol. 7, No. 1, pp. 32-37, 2003. |
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