TWI683828B - Cancer stem cell targeting peptide and use thereof - Google Patents

Cancer stem cell targeting peptide and use thereof Download PDF

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TWI683828B
TWI683828B TW107109910A TW107109910A TWI683828B TW I683828 B TWI683828 B TW I683828B TW 107109910 A TW107109910 A TW 107109910A TW 107109910 A TW107109910 A TW 107109910A TW I683828 B TWI683828 B TW I683828B
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cancer
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synthetic peptide
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TW201823265A (en
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莊景凱
蘇郁琇
林岱昀
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財團法人農業科技研究院
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Abstract

A synthetic peptide that targets cancer stem cells is provided. The peptide consists of the amino acid sequence of anyone of SEQ ID NO: 1 to SEQ ID NO: 15. Also provided is a composition comprising said synthetic peptide with a therapeutic agent fused thereto, and a pharmaceutically acceptable carrier or diluent. Further provided is a method of screening a peptide specifically targeting to a cancer stem cell. The method comprises the steps of establishing an oligopeptide library by using a phage expression system, contacting the library with a culture of bulk tumor cells of a cancer cell line, contacting the phages which do not bind to the bulk tumor cells with a culture of cancer stem cells of said cancer cell line, and screening a peptide specifically targeting to a cancer stem cell from the phages which bind to the cancer stem cells.

Description

靶向癌幹細胞的胜肽及其用途Peptide targeting cancer stem cells and uses thereof

本發明係關於一種靶向癌幹細胞的合成胜肽。本發明亦有關一種醫藥組合物,其包含具有一治療劑的此種合成胜肽。另一方面,本發明係有關於一種篩選特異性靶向癌幹細胞之胜肽的方法。The invention relates to a synthetic peptide targeting cancer stem cells. The invention also relates to a pharmaceutical composition comprising such a synthetic peptide with a therapeutic agent. In another aspect, the invention relates to a method for screening peptides that specifically target cancer stem cells.

自從1994年首次發現急性骨髓性白血病(AML)的癌幹細胞(CSC)以來,陸續在乳癌、腦癌、肝癌、結腸癌、肺癌、及胰臟癌中進一步鑑定出CSC的存在。除了正常幹細胞的自我更新活性以外,CSCs尚可抵抗化療、放療、缺氧、及免疫監視療法。 此外,CSCs被認為是癌症復發的主要原因。Since the cancer stem cells (CSC) of acute myeloid leukemia (AML) were first discovered in 1994, the existence of CSC has been further identified in breast cancer, brain cancer, liver cancer, colon cancer, lung cancer, and pancreatic cancer. In addition to the self-renewal activity of normal stem cells, CSCs are still resistant to chemotherapy, radiotherapy, hypoxia, and immune surveillance therapy. In addition, CSCs are considered to be the main cause of cancer recurrence.

目前仍需特異性靶向癌幹細胞的試劑,以用於治療、造影、及其他目的。Agents that specifically target cancer stem cells are still needed for treatment, imaging, and other purposes.

在一方面,本發明提供一種靶向癌幹細胞之合成胜肽,其係由SEQ ID NO: 1至SEQ ID NO: 15中任一者之胺基酸序列組成。In one aspect, the present invention provides a synthetic peptide targeting cancer stem cells, which consists of the amino acid sequence of any one of SEQ ID NO: 1 to SEQ ID NO: 15.

在本發明之一具體實施例中,所述合成胜肽係用於診斷癌症。根據本發明之一些其他具體實施例,所述胜肽係用於將治療劑靶向癌幹細胞。In a specific embodiment of the present invention, the synthetic peptide is used to diagnose cancer. According to some other specific embodiments of the present invention, the peptide is used to target a therapeutic agent to cancer stem cells.

根據本發明,合成胜肽可接合至可檢測部分。在本發明之部分具體實施例中,可檢測部分為放射線標記、螢光團、或磁造影對比劑。According to the invention, the synthetic peptide can be joined to a detectable part. In some embodiments of the present invention, the detectable part is a radioactive label, a fluorophore, or a magnetic contrast agent.

根據本發明,合成胜肽可接合至一治療劑。在本發明之部分較佳具體實施例中,治療劑為抗腫瘤劑。抗腫瘤劑包括但不侷限於,化學治療劑、放射線治療劑或免疫治療劑。According to the present invention, the synthetic peptide can be conjugated to a therapeutic agent. In some preferred embodiments of the present invention, the therapeutic agent is an anti-tumor agent. Anti-tumor agents include, but are not limited to, chemotherapeutic agents, radiation therapy agents, or immunotherapeutic agents.

另一方面,本發明提供一種組合物,其包含根據本發明之合成胜肽及醫藥上可接受之載體或稀釋劑。較佳地,該合成胜肽接合至一治療劑。In another aspect, the present invention provides a composition comprising the synthetic peptide according to the present invention and a pharmaceutically acceptable carrier or diluent. Preferably, the synthetic peptide is conjugated to a therapeutic agent.

又一方面,本發明提供一種篩選特異性靶向癌幹細胞之胜肽的方法,包含利用噬菌體表現系統建立寡胜肽庫、以癌細胞株之腫瘤實質細胞培養物接觸該庫、以該癌細胞株之癌幹細胞或癌幹細胞樣細胞培養物接觸未結合至該腫瘤實質細胞之噬菌體、及由結合至癌幹細胞或癌幹細胞樣細胞之噬菌體篩選特異性靶向癌幹細胞之胜肽。In yet another aspect, the present invention provides a method for screening peptides that specifically target cancer stem cells, comprising establishing a library of oligopeptides using a phage expression system, contacting the library with tumor parenchymal cell cultures of cancer cell lines, and using the cancer cells The cancer stem cells or cancer stem cell-like cell cultures of the strain are contacted with phages that are not bound to the tumor parenchymal cells, and peptides that specifically target cancer stem cells are screened by phage that are bound to cancer stem cells or cancer stem cell-like cells.

應了解到,上述一般描述及下列詳盡描述係僅在於示例及說明,而非限制本發明。It should be understood that the above general description and the following detailed description are only examples and illustrations, rather than limiting the present invention.

除非另有指明,本文使用的所有技術及科學術語具有與本發明所屬領域技術人員普遍理解的相同含義。Unless otherwise indicated, all technical and scientific terms used herein have the same meaning as commonly understood by those skilled in the art to which the present invention belongs.

在一方面,本發明提供一種靶向癌幹細胞的合成胜肽,其係由SEQ ID NO: 1至SEQ ID NO: 15中任一者之胺基酸序列組成。本發明之合成胜肽選擇性或特異性歸巢至癌幹細胞,因此適合以共軛物形式選擇性地將系統性投予之治療劑靶向癌幹細胞。此治療劑之選擇性靶向方式增加藥劑傳送至癌幹細胞之有效量,同時降低藥劑對身體其他細胞或其他部分不良效應的可能性。In one aspect, the present invention provides a synthetic peptide targeting cancer stem cells, which consists of the amino acid sequence of any one of SEQ ID NO: 1 to SEQ ID NO: 15. The synthetic peptides of the present invention selectively or specifically homing to cancer stem cells, and therefore are suitable for selectively targeting systemically administered therapeutic agents to cancer stem cells in the form of conjugates. The selective targeting of this therapeutic agent increases the effective amount of the agent delivered to cancer stem cells, and at the same time reduces the possibility of adverse effects of the agent on other cells or other parts of the body.

本文中使用的「癌幹細胞(CSCs)」乙詞係指哺乳類動物(如人類或小鼠)的癌幹細胞。The term "cancer stem cells (CSCs)" as used herein refers to cancer stem cells of mammals (such as humans or mice).

本發明之合成胜肽歸巢至、靶向或特異性結合至CSCs,但並未或極弱地結合至(正常)癌細胞(CCs)。癌幹細胞係指源自包括但不限於,乳癌、肝癌、胰臟癌、及結腸癌等癌症。The synthetic peptides of the invention homing, targeting or specifically binding to CSCs, but not or very weakly binding to (normal) cancer cells (CCs). Cancer stem cells refer to cancers including but not limited to breast cancer, liver cancer, pancreatic cancer, and colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列SQPTWMF (SEQ ID NO: 1) (亦稱作CSC HP-1)組成。在一具體實施例中,CSC HP-1歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-1歸巢至、靶向、或特異性結合至結腸癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence SQPTWMF (SEQ ID NO: 1) (also known as CSC HP-1). In a specific embodiment, CSC HP-1 homing, targeting, or specifically binding to CSCs of breast cancer. In another specific embodiment, CSC HP-1 homing, targeting, or specifically binding to CSCs of colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列GMMSSPP (SEQ ID NO: 2)(亦稱作CSC HP-2)組成。在一具體實施例中,CSC HP-2歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-2歸巢至、靶向、或特異性結合至結腸癌之CSCs。According to a specific embodiment of the invention, the synthetic peptide consists of the amino acid sequence GMMSPPP (SEQ ID NO: 2) (also known as CSC HP-2). In a specific embodiment, CSC HP-2 homes, targets, or specifically binds to CSCs of breast cancer. In another specific embodiment, CSC HP-2 homes, targets, or specifically binds to CSCs of colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列FSGGGNH (SEQ ID NO: 3)(亦稱作CSC HP-3)組成。在一具體實施例中,CSC HP-3歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-3歸巢至、靶向、或特異性結合至結腸癌之CSCs。在另一具體實施例中,CSC HP-3歸巢至、靶向、或特異性結合至肝癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence FSGGGNH (SEQ ID NO: 3) (also known as CSC HP-3). In a specific embodiment, CSC HP-3 homes, targets, or specifically binds to CSCs of breast cancer. In another specific embodiment, CSC HP-3 homes, targets, or specifically binds to CSCs of colon cancer. In another specific embodiment, CSC HP-3 homes, targets, or specifically binds to CSCs of liver cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 FPFTKNL (SEQ ID NO: 4)(亦稱作CSC HP-4)組成。在一具體實施例中,CSC HP-4歸巢至、靶向、或特異性結合至乳癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence FPFTKNL (SEQ ID NO: 4) (also known as CSC HP-4). In a specific embodiment, CSC HP-4 homes, targets, or specifically binds to CSCs of breast cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列ATYGNLW (SEQ ID NO: 5)(亦稱作CSC HP-5)組成。在一具體實施例中,CSC HP-5歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-5歸巢至、靶向、或特異性結合至結腸癌之CSCs。According to a specific embodiment of the present invention, the synthetic peptide consists of the amino acid sequence ATYGNLW (SEQ ID NO: 5) (also known as CSC HP-5). In a specific embodiment, CSC HP-5 homes, targets, or specifically binds to CSCs of breast cancer. In another specific embodiment, CSC HP-5 homes to, targets, or specifically binds to CSCs of colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列YHMPALM (SEQ ID NO: 6)(亦稱作CSC HP-6)組成。在一具體實施例中,CSC HP-6歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-6歸巢至、靶向、或特異性結合至結腸癌之CSCs。According to a specific embodiment of the present invention, the synthetic peptide consists of the amino acid sequence YHMPALM (SEQ ID NO: 6) (also known as CSC HP-6). In a specific embodiment, CSC HP-6 homes to, targets, or specifically binds to CSCs of breast cancer. In another specific embodiment, CSC HP-6 homing, targeting, or specifically binding to CSCs of colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 HGGVRLY (SEQ ID NO: 7)(亦稱作CSC HP-7)組成。在一具體實施例中,CSC HP-7歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-7歸巢至、靶向、或特異性結合至結腸癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence HGGVRLY (SEQ ID NO: 7) (also known as CSC HP-7). In a specific embodiment, CSC HP-7 homing, targeting, or specifically binding to CSCs of breast cancer. In another specific embodiment, CSC HP-7 homing, targeting, or specifically binding to CSCs of colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列ELTPLTL (SEQ ID NO: 8)(亦稱作CSC HP-8)組成。在一具體實施例中,CSC HP-8歸巢至、靶向、或特異性結合至乳癌之CSCs。在另一具體實施例中,CSC HP-8歸巢至、靶向、或特異性結合至結腸癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence ELTPLTL (SEQ ID NO: 8) (also known as CSC HP-8). In a specific embodiment, CSC HP-8 homing, targeting, or specifically binding to CSCs of breast cancer. In another specific embodiment, CSC HP-8 homing, targeting, or specifically binding to CSCs of colon cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列GPSASRN (SEQ ID NO: 9)(亦稱作CSC HP-10)組成。在一具體實施例中,CSC HP-10歸巢至、靶向、或特異性結合至乳癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence GPSASRN (SEQ ID NO: 9) (also known as CSC HP-10). In a specific embodiment, CSC HP-10 homing, targeting, or specifically binding to CSCs of breast cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列GLAPFNA (SEQ ID NO: 10)(亦稱作CSC HP-11)組成。在一具體實施例中,CSC HP-11歸巢至、靶向、或特異性結合至乳癌之CSCs。According to a specific embodiment of the invention, the synthetic peptide consists of the amino acid sequence GLAPFNA (SEQ ID NO: 10) (also known as CSC HP-11). In a specific embodiment, CSC HP-11 homing, targeting, or specifically binding to CSCs of breast cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 KIYTTLD (SEQ ID NO: 11)(亦稱作CSC HP-9)組成。According to a specific embodiment of the invention, the synthetic peptide consists of the amino acid sequence KIYTTLD (SEQ ID NO: 11) (also known as CSC HP-9).

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 NLQPPAY (SEQ ID NO: 12)(亦稱作CSC HP-12)組成。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence NLQPPAY (SEQ ID NO: 12) (also known as CSC HP-12).

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 GPKVTIW (SEQ ID NO: 13)(亦稱作CSC HP-Hp1)組成。在一具體實施例中,CSC HP-Hp1歸巢至、靶向、或特異性結合至胰臟癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence GPKVTIW (SEQ ID NO: 13) (also known as CSC HP-Hp1). In a specific embodiment, CSC HP-Hpl homes, targets, or specifically binds to CSCs of pancreatic cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 GSPVMSW (SEQ ID NO: 14)(亦稱作CSC HP-Hp2)組成。在一具體實施例中,CSC HP-Hp2歸巢至、靶向、或特異性結合至胰臟癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence GSPVMSW (SEQ ID NO: 14) (also known as CSC HP-Hp2). In a specific embodiment, CSC HP-Hp2 homes, targets, or specifically binds to CSCs of pancreatic cancer.

根據本發明之一具體實施例,合成胜肽係由胺基酸序列 YHQVKPH (SEQ ID NO: 15)(亦稱作CSC HP-Hp3)組成。在一具體實施例中,CSC HP-Hp3歸巢至、靶向、或特異性結合至胰臟癌之CSCs。According to one embodiment of the present invention, the synthetic peptide consists of the amino acid sequence YHQVKPH (SEQ ID NO: 15) (also known as CSC HP-Hp3). In a specific embodiment, CSC HP-Hp3 homes, targets, or specifically binds to CSCs of pancreatic cancer.

本發明之合成胜肽可使用常規方法製備或合成,例如,化學合成法。The synthetic peptide of the present invention can be prepared or synthesized using conventional methods, for example, chemical synthesis.

根據本發明之特定具體實施例,合成胜肽係用於診斷癌症。根據本發明之一些其他具體實施例,合成胜肽係用於將治療劑靶向癌幹細胞。According to specific embodiments of the present invention, synthetic peptides are used to diagnose cancer. According to some other specific embodiments of the present invention, synthetic peptides are used to target therapeutic agents to cancer stem cells.

根據本發明,合成胜肽可接合至可檢測部分。根據本發明之特定具體實施例,可檢測部分為放射線標記、螢光團、或磁造影對比劑。According to the invention, the synthetic peptide can be joined to a detectable part. According to a specific embodiment of the present invention, the detectable part is a radioactive label, a fluorophore, or a magnetic contrast agent.

根據本發明,合成胜肽可接合至治療劑。在本發明之特定較佳具體實施例中,治療劑為抗腫瘤劑。抗腫瘤劑包括但不限於,化學治療劑、放射線治療劑、或免疫治療劑。本文中使用的「免疫治療劑」乙詞係指在治療上可增強或抑制以該藥劑治療之個體之免疫系統的藥劑。According to the present invention, synthetic peptides can be conjugated to therapeutic agents. In certain preferred embodiments of the present invention, the therapeutic agent is an anti-tumor agent. Anti-tumor agents include, but are not limited to, chemotherapeutic agents, radiation therapy agents, or immunotherapeutic agents. The term "immunotherapy agent" as used herein refers to an agent that can therapeutically enhance or suppress the immune system of an individual treated with the agent.

上述可檢測部分或治療劑可直接或間接結合或接合至本發明之合成胜肽,例如,經由共價鍵或通過離子鍵結合。The above-mentioned detectable moiety or therapeutic agent may be directly or indirectly bound or conjugated to the synthetic peptide of the present invention, for example, via a covalent bond or through an ionic bond.

另一方面,本發明提供一種組合物,其包含本發明之合成胜肽及醫藥上可接受之載體或稀釋劑。較佳地,合成胜肽係接合至一治療劑。所述組合物可用作醫藥組合物。所述組合物之製備可藉由混合合成胜肽與醫藥上可接受之載體或稀釋劑,或者化學共軛連接胜肽與醫藥上可接受之載體或稀釋劑。In another aspect, the present invention provides a composition comprising the synthetic peptide of the present invention and a pharmaceutically acceptable carrier or diluent. Preferably, the synthetic peptide is conjugated to a therapeutic agent. The composition can be used as a pharmaceutical composition. The composition can be prepared by mixing a synthetic peptide with a pharmaceutically acceptable carrier or diluent, or chemically conjugating the peptide with a pharmaceutically acceptable carrier or diluent.

本發明之合成胜肽或組合物可靜脈注射投予有需求之個體。The synthetic peptide or composition of the present invention can be administered intravenously to an individual in need.

又一方面,本發明提供一種篩選特異性靶向癌幹細胞之胜肽的方法,其包含利用噬菌體表現系統建立寡胜肽庫、以癌細胞株之大量(正常)腫瘤細胞培養物接觸該庫之噬菌體、以該癌細胞株之癌幹細胞或癌幹細胞樣細胞之培養物接觸未結合至腫瘤實質細胞之噬菌體、以及由結合至癌幹細胞之噬菌體篩選特異性靶向癌幹細胞之胜肽。In yet another aspect, the present invention provides a method for screening peptides that specifically target cancer stem cells, which includes establishing a library of oligopeptides using a phage expression system and contacting the library with a large number (normal) tumor cell cultures of cancer cell lines Bacteriophage, a phage that does not bind to tumor parenchymal cells with a culture of cancer stem cells or cancer stem cell-like cells of the cancer cell line, and a phage that binds to cancer stem cells screen for peptides that specifically target cancer stem cells.

根據本發明之較佳具體實施例,癌幹細胞或癌幹細胞樣細胞係源自於瘤球(tumorosphere)(Weiswaldet al. , Neoplasia, 17(1): 1-15 (2015)),其製自正常腫瘤細胞。瘤球可由無血清培養法製備。舉例而言,揭示於Eramoet al. , Cell Death Differentiation, 15: 504-514 (2008);Cioceet al. , Cell Cycle, 9: 2878-2887 (2010);Caoet al. , BMC Gastroenterol., 11: 71 (2011);或者Chenet al. , Clin. Exp. Metastasis, 28(8): 751-763 (2011))之方法。According to a preferred embodiment of the present invention, the cancer stem cell or cancer stem cell-like cell line is derived from a tumor ball (tumorosphere) (Weiswald et al. , Neoplasia, 17(1): 1-15 (2015)), which is made from Normal tumor cells. Tumor balls can be prepared by serum-free culture. For example, disclosed in Eramo et al. , Cell Death Differentiation, 15: 504-514 (2008); Cioce et al. , Cell Cycle, 9: 2878-2887 (2010); Cao et al. , BMC Gastroenterol., 11: 71 (2011); or Chen et al. , Clin. Exp. Metastasis, 28(8): 751-763 (2011)).

在先前技術中,靶向(正常)癌細胞之胜肽或其他實體已得到大多數關注,部分係因少量癌幹細胞可藉由細胞培養取得。此外,根據發明人的知識,目前尚未有人提出篩選未結合至正常癌細胞,而結合至癌幹細胞或癌幹細胞樣細胞之胜肽的策略。然而,發明人意外地發現,經由上述方法並使用源自於瘤球的癌幹細胞或癌幹細胞樣細胞,可有效篩選出特異性結合至癌幹細胞的胜肽。In the prior art, peptides or other entities targeting (normal) cancer cells have received most attention, in part because a small number of cancer stem cells can be obtained by cell culture. In addition, according to the inventors' knowledge, no one has yet proposed a strategy for screening peptides that are not bound to normal cancer cells, but bound to cancer stem cells or cancer stem cell-like cells. However, the inventors have unexpectedly found that by using the above method and using cancer stem cells or cancer stem cell-like cells derived from tumor cells, peptides that specifically bind to cancer stem cells can be effectively screened.

本發明經由以下實例進一步說明,提供實例之目的僅用於說明而非侷限。The invention is further illustrated by the following examples. The purpose of providing examples is for illustration only and not for limitation.

實例Examples

材料及方法Materials and methods

1. 癌細胞及癌幹細胞(CSC)培養1. Culture of cancer cells and cancer stem cells (CSC)

儘管CSCs可利用表面標記如CD44與CD133富集化,但能選擇性增殖CSCs的實際與簡易方法乃是研究關鍵。一開創性無血清培養法係於2008年建立,其可於懸浮狀態下選擇性增殖人類肺臟CSCs(Eramoet al. , Cell Death Differentiation, 15: 504-514 (2008))。自此以後,乳房(Cioceet al. , Cell Cycle, 9: 2878-2887 (2010))、肝臟(Caoet al. , BMC Gastroenterol., 11: 71 (2011))、及結腸(Chenet al. , Clin. Exp. Metastasis, 28(8): 751-763 (2011))之CSCs被報告。CSCs生長成球狀聚集形狀,從而被建議命名為瘤球(Weiswaldet al. , Neoplasia, 17(1): 1-15 (2015))。Although CSCs can be enriched with surface markers such as CD44 and CD133, the practical and simple method to selectively propagate CSCs is the key to research. A pioneering serum-free culture system was established in 2008, which can selectively proliferate human lung CSCs in suspension (Eramo et al. , Cell Death Differentiation, 15: 504-514 (2008)). Since then, the breast (Cioce et al. , Cell Cycle, 9: 2878-2887 (2010)), liver (Cao et al. , BMC Gastroenterol., 11: 71 (2011)), and colon (Chen et al. , Clin. Exp. Metastasis, 28(8): 751-763 (2011)) was reported. CSCs grow into a spherical aggregate shape, which is suggested to be named tumor balls (Weiswald et al. , Neoplasia, 17(1): 1-15 (2015)).

重組型生長因子係購自PeproTech。小鼠乳癌EMT6、肝癌Hepa1-6、及人類胰臟管腺瘤PANC-1細胞株係維持於補充有10% FCS 的DMEM。小鼠結腸癌CT26細胞株係培養於補充有10% FCS 的RPMI1640。CSCs之基礎培養基為DMEM/F12伴隨2 mM麩醯胺酸,且EMT6 CSCs之補充物為25 ng/mL rmEGF、25 ng/mL rmFGF2、5 μg/mL胰島素、4 μg/mL肝素、0.5 μg/mL氫皮質酮、及1% BSA;在CT26 CSCs則為20 ng/mL rmEGF、5 μg/mL胰島素、2% B27、及0.4% BSA;在Hepa1-6 CSCs則為20 ng/mL rmEGF、10 ng/mL rmFGF2、2% B27、及1% N2;以及在PANC-1 CSCs則為2% B27與20 ng/mL rhFGF2。欲製備瘤球,癌細胞以低密度(如<104 個細胞/mL)培養於無血清培養基。於培養7天後,以40 μm之細胞過濾器收取瘤球,並於室溫下以900 ×g離心5分鐘。以胰蛋白酶將瘤球團粒分離成單一細胞,之後再經7天將所得細胞擴增成瘤球。每隔一天補充生長因子,並以第三至第五回擴展之經分離瘤球進行實驗。The recombinant growth factor was purchased from PeproTech. Mouse breast cancer EMT6, liver cancer Hepa1-6, and human pancreatic duct adenoma PANC-1 cell lines were maintained in DMEM supplemented with 10% FCS. The mouse colon cancer CT26 cell line was cultured in RPMI1640 supplemented with 10% FCS. The basic medium for CSCs is DMEM/F12 with 2 mM glutamic acid, and the supplements for EMT6 CSCs are 25 ng/mL rmEGF, 25 ng/mL rmFGF2, 5 μg/mL insulin, 4 μg/mL heparin, 0.5 μg/ mL of hydrocorticosterone, and 1% BSA; 20 ng/mL rmEGF, 5 μg/mL insulin, 2% B27, and 0.4% BSA in CT26 CSCs; 20 ng/mL rmEGF, 10 in Hepa1-6 CSCs ng/mL rmFGF2, 2% B27, and 1% N2; and in PANC-1 CSCs it is 2% B27 and 20 ng/mL rhFGF2. For the preparation of spherical tumor, cancer cells at low density (e.g., <10 4 cells / mL) cultured in serum-free medium. After 7 days of culture, the tumor balls were collected with a 40 μm cell strainer and centrifuged at 900 × g for 5 minutes at room temperature. The tumor pellets were separated into single cells with trypsin, and then the resulting cells were expanded into tumor pellets over 7 days. Growth factors were supplemented every other day, and experiments were conducted with the isolated tumor bulbs expanded from the third to the fifth round.

2. M13噬菌體顯示法2. M13 phage display method

M13 PhD-7庫(NEB,E8100)係購自New England Biolabs Inc.,其含有109 個獨立殖株。溶於10 mL DMEM之1013 個溶菌斑形成單位(pfus)之M13 PhD-7噬菌體係於T75培養瓶中預先以癌細胞吸附二次,每次1小時。接著,將上清液移至T25培養瓶,內含5×106 個CSCs,並培養1小時。利用離心移除未結合及結合能力差的噬菌體,並於DMEM/0/2% BSA中懸浮三次。細胞團粒懸浮於1 mL PBS,內含109 個大腸桿菌ER2738,並於振盪器中培養1小時。之後,加入10 mL LB/5 mM MgCl2 。於37°C下培養整夜後,離心移除細胞,將上清液中之噬菌體滴定。前述選擇程序係以EMT6與PANC-1進行三回,以分別取得初級EMT6 CSC歸巢胜肽(HP)-及PANC-1 CSC HP-庫。隨後,挑選M13溶菌斑,以製備定序用DNA。EMT6 CSC HP-庫係進一步再以CT26 CSCs、Hepa1-6 CSCs、及小鼠胚胎幹細胞(mESC)擇取,以製備次級CT26 CSC HP-、Hepa1-6 CSC HP-、及CSC/ES HP-庫。收集mESC吸附後之未結合部分,並定為CSC PH-庫。參見圖4A與4B。The M13 PhD-7 library (NEB, E8100) was purchased from New England Biolabs Inc. and contains 109 independent clones. Was dissolved in 10 mL DMEM 1013 of plaques forming units (PFUS) of phage M13 PhD-7 based on the cancer cells in T75 flasks pre-adsorbed twice, each time for 1 hour. Next, the supernatant was transferred to a T25 culture flask containing 5×10 6 CSCs and incubated for 1 hour. Unbound and poorly bound phages were removed by centrifugation and suspended three times in DMEM/0/2% BSA. The cell pellet was suspended in 1 mL PBS, containing 109 E. coli ER2738, and incubated for 1 hour in a shaker. After that, 10 mL LB/5 mM MgCl 2 was added . After incubating at 37°C overnight, the cells were removed by centrifugation, and the phage in the supernatant was titrated. The aforementioned selection procedure was carried out three times with EMT6 and PANC-1 to obtain the primary EMT6 CSC homing peptide (HP)- and PANC-1 CSC HP-libraries. Subsequently, M13 plaques were picked to prepare DNA for sequencing. The EMT6 CSC HP-library is further selected with CT26 CSCs, Hepa1-6 CSCs, and mouse embryonic stem cells (mESC) to prepare secondary CT26 CSC HP-, Hepa1-6 CSC HP-, and CSC/ES HP- Library. The unbound part of mESC after adsorption was collected and designated as CSC PH-library. See Figures 4A and 4B.

3. CSC HPs結合至CSCs3. Combining CSC HPs with CSCs

以20 μg/mL之玫瑰紅B標記之CSC HP1 (Rd-CSC HP-1)與CSC HP2 (Rd-CSC HP-2)及FITC標記之CSC HP11 (FITC-CSC HP-11)直接染色EMT6 CSCs與CCs。細胞以DAPI進行對比染色。Direct staining of EMT6 CSCs with CSC HP1 (Rd-CSC HP-1) and CSC HP2 (Rd-CSC HP-2) and FISC-labeled CSC HP11 (FITC-CSC HP-11) labeled with 20 μg/mL Rose Bengal B With CCs. The cells were stained with DAPI.

4. 聚醣微陣列分析4. Glycan microarray analysis

N端生物素共軛連接之CSC HPs,其序列如下表A所示,係由GeneDirex合成,其純度高於95%。生物素-CSC HPs係溶於DMSO並製成10 mg/mL儲液。The sequence of N-terminal biotin conjugated CSC HPs, as shown in Table A below, is synthesized by GeneDirex and its purity is higher than 95%. Biotin-CSC HPs is dissolved in DMSO and made into 10 mg/mL stock solution.

表A. 生物素標記之CSC HPs

Figure 107109910-A0304-0001
Table A. Biotin-labeled CSC HPs
Figure 107109910-A0304-0001

聚醣陣列100微晶片(Cat. # GA-Glycan-100)係購自RayBiotech,並按照製造商說明進行些許修改。簡言之,在以400 μL樣本稀釋劑(項目E)於室溫下阻斷30分鐘後,以樣本稀釋劑將生物素共軛連接之CSC HPs稀釋至1 μg/400 μL,並於室溫下進行雜交反應2小時。於清洗後,將400 μL之1× Cy3-共軛連接之鏈黴親和素(streptavidin)加入各孔中。以塑料膠帶覆蓋培養室,並以鋁箔覆蓋載玻片,避免於暗房培養時曝光。載玻片與Cy3-共軛連接之鏈黴親和素於室溫下培養1小時,伴隨輕柔搖動或搖晃。徹底清洗後,使載玻片徹底排洩,並以雷射掃描儀Axon GenePix讀取其上之螢光信號。聚醣X之相對強度係定義為(X之平均值 – 陰性對照組)/(陽性對照組 – 陰性對照組) × 100%。The glycan array 100 microchip (Cat. #GA-Glycan-100) was purchased from RayBiotech, and was slightly modified according to the manufacturer's instructions. Briefly, after blocking with 400 μL of sample diluent (item E) at room temperature for 30 minutes, the biotin-conjugated CSC HPs were diluted to 1 μg/400 μL with sample diluent and at room temperature The hybridization reaction was carried out for 2 hours. After washing, 400 μL of 1× Cy3-conjugated linked streptavidin (streptavidin) was added to each well. Cover the incubation room with plastic tape and cover the slides with aluminum foil to avoid exposure during dark room cultivation. The slides were incubated with Cy3-conjugated streptavidin at room temperature for 1 hour with gentle shaking or shaking. After thorough cleaning, allow the slides to be completely excreted and read the fluorescent signal on it with the laser scanner Axon GenePix. The relative intensity of glycan X is defined as (average value of X-negative control group) / (positive control group-negative control group) × 100%.

5. 免疫螢光(IF)試驗5. Immunofluorescence (IF) test

初級抗體兔多株抗CD44 (GTX102111)、抗E-鈣黏蛋白(E-cadherin)(GTX61823)與抗CDSN (GTX110093)及小鼠單株抗SSEA-1 (IgM,GTX48038)、抗SSEA-5 (IgG,GTX70019)、及抗路易斯Y (IgM,GTX75903)係購自GeneTex;小鼠單株抗SSEA-4 (IgG,90230)、抗TRA-1-60與TRA-1-81 (IgM,90232)係購自Millipore;小鼠單株抗GbH (IgM,ALX-804-550)係購自Enzo。次級抗體DyLight594-共軛連接之山羊抗兔IgG (111-515-144)與DyLight488-共軛連接之驢抗小鼠IgG (715-485-151)係購自Jackson Lab.;DyLight594-共軛連接之山羊抗小鼠IgM (GTX76754)係購自GeneTex。癌細胞與瘤球係以4%聚甲醛/PBS固定,並以0.5% NP-40/1% BSA/PBS (PBSNB)透化(permeabilized)。隨後,以初級抗體培養細胞二小時,其係以PBSNB稀釋50至100倍。細胞以0.05% NP-40/PBS (PBSN)清洗4次後,接著以次級抗體(1/200稀釋於PBSNB)培養2小時。在以PBSN清洗4次及以水簡易清洗一次後,細胞以DAPI封固。Primary antibody rabbit multiple anti-CD44 (GTX102111), anti-E-cadherin (E-cadherin) (GTX61823) and anti-CDSN (GTX110093) and mouse single anti-SSEA-1 (IgM, GTX48038), anti-SSEA-5 (IgG, GTX70019), and anti-Lewis Y (IgM, GTX75903) were purchased from GeneTex; mouse monoclonal anti-SSEA-4 (IgG, 90230), anti-TRA-1-60 and TRA-1-81 (IgM, 90232 ) Was purchased from Millipore; mouse monoclonal anti-GbH (IgM, ALX-804-550) was purchased from Enzo. The secondary antibodies DyLight594-conjugated goat anti-rabbit IgG (111-515-144) and DyLight488-conjugated donkey anti-mouse IgG (715-485-151) were purchased from Jackson Lab.; DyLight594-conjugated The linked goat anti-mouse IgM (GTX76754) was purchased from GeneTex. The cancer cells and tumor cells were fixed with 4% POM/PBS and permeabilized with 0.5% NP-40/1% BSA/PBS (PBSNB). Subsequently, the cells were incubated with the primary antibody for two hours, which was diluted 50 to 100 times with PBSNB. After the cells were washed 4 times with 0.05% NP-40/PBS (PBSN), they were then incubated with secondary antibody (diluted 1/200 in PBSNB) for 2 hours. After washing 4 times with PBSN and once with water, the cells were mounted with DAPI.

實例Examples 11 :小鼠: Mice EMT6EMT6 , CT26CT26 、及,and Hepa1-6 CSCsHepa1-6 CSCs 之鑑定Identification

以M13噬菌體顯示之特異於癌幹細胞之胜肽的選擇標準取決於CSCs與癌細胞(CCs)間之表面特徵差異。以瘤球形式製備之小鼠EMT6、CT26、及Hepa1-6 CSCs (數據未顯示)係藉由檢查特異性幹細胞表面標記進行鑑定。幹細胞表面標記TRA-1-60係高度表現於所有三CSCs之上,但其在相對應之CCs上表現量低或未檢出,而以組成性表現之表面蛋白角化粒(corneodesmosin;CDSN)在CSCs與CCs兩者皆可檢出(數據未顯示)。除了SSEA-4之外,其在EMT6 CSCs上顯示弱表現,所有的人類CSC一般標記, CD44與E-鈣黏蛋白,以及多能幹細胞標記,SSEA-1、SSEA-5、TRA-1-60、及TRA-1-81,經證實在所有三小鼠CSCs上為強表現(數據未顯示)。The selection criteria for peptides specific to cancer stem cells displayed by M13 bacteriophage depends on the difference in surface characteristics between CSCs and cancer cells (CCs). Mouse EMT6, CT26, and Hepa1-6 CSCs (data not shown) prepared in the form of tumor balls were identified by examining specific stem cell surface markers. Stem cell surface marker TRA-1-60 is highly expressed on all three CSCs, but its expression on the corresponding CCs is low or undetectable, and the constitutively expressed surface protein keratinocytes (corneodesmosin; CDSN) Both CSCs and CCs can be detected (data not shown). In addition to SSEA-4, it shows weak performance on EMT6 CSCs, all human CSC general markers, CD44 and E-cadherin, and pluripotent stem cell markers, SSEA-1, SSEA-5, TRA-1-60 , And TRA-1-81, proved to be strong on all three mouse CSCs (data not shown).

實例Examples 22 :初級:primary EMT6 CSC HP-EMT6 CSC HP- Library

欲探究CSC特異性HPs,M13 PhD7七胜肽庫係以EMT6 CCs預先吸附,以移除一般癌症HPs,隨後將游離噬菌體轉移至EMT6 CSCs以進行正向選擇(positive selection)。結合於EMT6 CSCs之噬菌體係經捕捉,並利用大腸桿菌ER2738放大。前述選擇程序係進行三回,以製備富集之初級EMT6 CSC HP庫。隨機挑選獨立之溶菌斑,且讀取31個有效序列並摘錄於下表1。To explore CSC-specific HPs, the M13 PhD7 heptad peptide library was pre-adsorbed with EMT6 CCs to remove general cancer HPs, and then free phages were transferred to EMT6 CSCs for positive selection. The phage system bound to EMT6 CSCs was captured and amplified using E. coli ER2738. The aforementioned selection procedure was performed three times to prepare the enriched primary EMT6 CSC HP library. Randomly selected independent plaques, and read 31 valid sequences and excerpted in Table 1 below.

表1:初級與次級CSC HP-庫檢測之CSC HP序列次數

Figure 107109910-A0304-0002
Table 1: Number of CSC HP sequences detected by primary and secondary CSC HP-libraries
Figure 107109910-A0304-0002

胜肽SQPTWMF (稱作CSC HP-1) (SEQ ID NO: 1)、GMMSSPP (稱作CSC HP-2) (SEQ ID NO: 2)、FSGGGNH (稱作CSC HP-3) (SEQ ID NO: 3)、FPFTKNL (稱作CSC HP-4) (SEQ ID NO: 4)、及ATYGNLW (稱作CSC HP-5) (SEQ ID NO: 5)分別發生10、6、5、3、及2次。胜肽YHMPALM (稱作CSC HP-6) (SEQ ID NO: 6)、HGGVRLY (稱作CSC HP-7) (SEQ ID NO: 7)、ELTPLTL (稱作CSC HP-8) (SEQ ID NO: 8)、GPSASRN (稱作CSC HP-10) (SEQ ID NO: 9)、及GLAPFNA (稱作CSC HP-11) (SEQ ID NO: 10)發生一次。由於M13 PhD7庫估計含有109 個獨立殖株,可得出結論,選擇程序非常有效。Peptide SQPTWMF (referred to as CSC HP-1) (SEQ ID NO: 1), GMMSPSP (referred to as CSC HP-2) (SEQ ID NO: 2), FSGGGNH (referred to as CSC HP-3) (SEQ ID NO: 3), FPFTKNL (called CSC HP-4) (SEQ ID NO: 4), and ATYGNLW (called CSC HP-5) (SEQ ID NO: 5) occurred 10, 6, 5, 3, and 2 times, respectively . Peptide YHMPALM (called CSC HP-6) (SEQ ID NO: 6), HGGVRLY (called CSC HP-7) (SEQ ID NO: 7), ELTPLTL (called CSC HP-8) (SEQ ID NO: 8), GPSASRN (called CSC HP-10) (SEQ ID NO: 9), and GLAPFNA (called CSC HP-11) (SEQ ID NO: 10) occur once. Since the M13 PhD7 library is estimated to contain 109 independent clones, it can be concluded that the selection procedure is very effective.

實例Examples 33 :次級: Secondary CT26 CSC HP-CT26 CSC HP- , Hepa1-6 CSC HP-Hepa1-6 CSC HP- , CSC/ESC HP-CSC/ESC HP- 、及,and CSC HP-CSC HP- Library

初級CSC HP-庫以CT26或Hepa1-6 CSCs直接篩選一次,以測試CSC HP對不同類型癌症親合性之偏性。如表1所示,CSC HP-8與CSC HP-3分別對CT26與Hepa1-6 CSCs更具特異性。CSCs與胚胎幹細胞(ESCs)間之CSC HP親合性偏性係另一有趣議題。CSC HP-1係進一步於ESC結合部分中富集(CSC/ESC-HP-庫)。於ESC未結合部分(CSC HP-庫)讀取到二新穎胜肽序列,KIYTTLD (CSC HP-9) (SEQ ID NO: 11)與NLQPPAY (CSC HP-12) (SEQ ID NO: 12)(表1)。The primary CSC HP-library is screened directly with CT26 or Hepa1-6 CSCs to test the bias of CSC HP affinity for different types of cancer. As shown in Table 1, CSC HP-8 and CSC HP-3 are more specific for CT26 and Hepa1-6 CSCs, respectively. The CSC HP affinity bias between CSCs and embryonic stem cells (ESCs) is another interesting topic. The CSC HP-1 line is further enriched in the ESC binding part (CSC/ESC-HP-library). Two novel peptide sequences were read from the unbound part of ESC (CSC HP-library), KIYTTLD (CSC HP-9) (SEQ ID NO: 11) and NLQPPAY (CSC HP-12) (SEQ ID NO: 12) ( Table 1).

實例Examples 44 : CSC HPsCSC HPs versus CSCsCSCs 間之交互作用Interaction

依據上述結果,選取CSC HP-1、CSC HP-2、CSC HP-3、CSC HP-8、CSC HP-9、CSC HP-10、及CSC HP-11,並以化學合成方式於N端共軛連接玫瑰紅B或螢光素(fluorescein)。所有該等胜肽特異性結合至EMT6、CT26、及Hepa1-6 CSCs。其於平行CC實驗中未被檢測出(圖1A與圖1B)。感興趣之處為,測定該等源自小鼠癌症之CSC HPs是否能辨識人類CSCs。由人類胰腺癌細胞株PANC-1製成之瘤球發現明確地與七個胜肽結合(圖1B)。Based on the above results, select CSC HP-1, CSC HP-2, CSC HP-3, CSC HP-8, CSC HP-9, CSC HP-10, and CSC HP-11, and chemically synthesize at the N-terminal The yoke is connected to Rose Bengal B or fluorescein. All these peptides specifically bind to EMT6, CT26, and Hepa1-6 CSCs. It was not detected in the parallel CC experiment (Figure 1A and Figure 1B). It is of interest to determine whether these CSC HPs derived from mouse cancer can recognize human CSCs. Tumor balls made from the human pancreatic cancer cell line PANC-1 were found to specifically bind to seven peptides (Figure 1B).

實例Examples 55 :初級:primary PANC-1 CSC HPPANC-1 CSC HP Library

若由小鼠CSCs選擇之CSC HPs可與人類CSCs交叉反應,則由人類CSCs選擇之CSC HPs能否與小鼠CSCs結合? 遵照類似程序進行EMT6 CSC HP篩選,在以人類胰腺PANC-1 CCs進行負向選擇及以PANC-1 CSCs進行正向選擇三回之後,建立初級PANC-1 CSC HP-庫。隨機揀取獨立溶菌斑,並讀取20個有效序列。胜肽GPKVTIW (定為CSC HP-hP1)、GSPVMSW (CSC HP-hP2)、及YHQVKPH (CSC HP-hP3)分別發生17、2、及1次。參見下表2。If CSC HPs selected by mouse CSCs can cross-react with human CSCs, can CSC HPs selected by human CSCs be combined with mouse CSCs? Follow similar procedures for EMT6 CSC HP screening, using human pancreas PANC-1 CCs After negative selection and positive selection with PANC-1 CSCs three times, a primary PANC-1 CSC HP-library was established. Randomly pick independent plaques and read 20 valid sequences. Peptide GPKVTIW (defined as CSC HP-hP1), GSPVMSW (CSC HP-hP2), and YHQVKPH (CSC HP-hP3) occurred 17, 2, and 1 times, respectively. See Table 2 below.

表2. 初級PANC-1CSC HP-庫檢測之CSC HP序列次數

Figure 107109910-A0304-0003
Table 2. Number of CSC HP sequences detected by the primary PANC-1CSC HP-library
Figure 107109910-A0304-0003

CSC HP-hP系列之胺基酸序列未相符於彼等小鼠CSC HPs。除了化學合成之FITC-CSC HP-hP1以外,其可選擇性地結合人類與小鼠CSCs兩者(數據未顯示),製備CSC HP-hP1-DsRed重組型蛋白,以測試CSC HP-hP1與PANC-1 CSCs間之交互作用是否受大分子攜帶接合至CSC HP-hP1胜肽C端之影響。經顯示,CSC HP-hP1-DsRed重組型蛋白選擇性地結合至PANC-1 CSCs,而CCs內一些細胞亦可以重組型蛋白染色,如圖2之箭頭所指。The amino acid sequence of the CSC HP-hP series did not match those of their mouse CSC HPs. In addition to the chemically synthesized FITC-CSC HP-hP1, it can selectively bind both human and mouse CSCs (data not shown) to prepare CSC HP-hP1-DsRed recombinant protein to test CSC HP-hP1 and PANC -1 Whether the interaction between CSCs is influenced by the macromolecules carrying the C-terminus of the CSC HP-hP1 peptide. It has been shown that CSC HP-hP1-DsRed recombinant protein selectively binds to PANC-1 CSCs, and some cells in CCs can also be stained with recombinant protein, as indicated by the arrow in FIG. 2.

實例Examples 66 : CSC HPsCSC HPs 之標靶Target

經開發之CSC HPs可區別CSCs與CCs,且發現其於人類與小鼠之間呈現跨物種(cross-species)現象。極有趣之處在於釐清該等CSC HPs之標靶。於硝酸纖維素膜上未有可檢測出之殘留的FITC-CSC HPs螢光信號,其係以SDS PAGE分離並以CSC膜蛋白墨染(數據未顯示)。於聚醣微陣列(聚醣陣列100微晶片),其上以100種寡醣染點4次,用以分析寡醣與CSC HPs間之交互作用的可能性。表2所列之生物素-CSC HPs係於晶片上與聚醣雜交。利用Cy3-共軛連接之鏈黴親和素探查晶片上捕捉之生物素-CSC HPs,並以雷射掃描儀讀取其上之螢光信號。兩個主要型態係繪製於圖3A-3F。第一者包括聚醣16 (Gal-b-1,4-Glc-b-)、18 (Gal-a-1,4-Gal-b-1,4-Glc-b-)、及26 (GalNAc-b-1,3-Gal-a-1,4-Gal-b-1,4-Glc-b-) Globo系列(圖3A)。典型案例為CSC HP-1與CHC HP-hP1 (圖3C)。除了Globo系列信號以外,第二個主要型態涉及聚醣19 (GlcNAc-b-1,3-Gal-b-1,4-Glc-b-,其為乳/異乳三醣骨架),其程度類似聚醣26 (圖3B)。典型案例為CSC HP5、CSC HP6、CSC HP7、及CSC HP9 (圖3C)。亦可檢測兩個惡性與轉移聚醣標記,聚醣63 (Fuc-a-1,2-Gal-b-1,4-(Fuc-a-1,3)-GlcNAc-b-,亦稱作路易斯Y表位)與聚醣69 (Neu5Ac-a-2,6-Gal-b-1,3-(Neu5Ac-a-2,6)-GalNAc-b-)。CSC HP-1與CSC HP-hP1表現較高之聚醣63信號,CSC HP-9、CSC HP-10、CSC HP-11、CSC HP-hP2、及CSC HP-hP3表現較高之聚醣69信號(圖3D)。兩個Neu5Ac-a-2,6-殘基皆係CSC HPs結合所需(圖3E)。依據前述結果,製備人類胰腺癌細胞PANC-1之CSCs,且Globo系列之CSC聚醣標記,SSEA-4與GbH、乳/異乳系列之CSC聚醣標記,SSEA-1與SSEA-5、及路易斯Y皆可藉由IF試驗於PANC-1 CSCs上證實,如圖3F所示。The developed CSC HPs can distinguish between CSCs and CCs, and it is found that they present cross-species between humans and mice. It is very interesting to clarify the targets of these CSC HPs. There was no detectable residual FITC-CSC HPs fluorescent signal on the nitrocellulose membrane, which was separated by SDS PAGE and stained with CSC membrane protein ink (data not shown). The glycan microarray (Glycan Array 100 microchip) was stained 4 times with 100 oligosaccharides to analyze the possibility of interaction between oligosaccharides and CSC HPs. The biotin-CSC HPs listed in Table 2 are hybridized with glycans on the wafer. Use Cy3-conjugated streptavidin to detect the biotin-CSC HPs captured on the chip, and read the fluorescent signal on it with a laser scanner. The two main types are plotted in Figures 3A-3F. The first one includes glycans 16 (Gal-b-1,4-Glc-b-), 18 (Gal-a-1,4-Gal-b-1,4-Glc-b-), and 26 (GalNAc -b-1,3-Gal-a-1,4-Gal-b-1,4-Glc-b-) Globo series (Figure 3A). Typical cases are CSC HP-1 and CHC HP-hP1 (Figure 3C). In addition to the Globo series of signals, the second major type involves glycan 19 (GlcNAc-b-1,3-Gal-b-1,4-Glc-b-, which is a milk/isolactotriose skeleton), which The degree is similar to glycan 26 (Figure 3B). Typical cases are CSC HP5, CSC HP6, CSC HP7, and CSC HP9 (Figure 3C). Can also detect two malignant and metastatic glycan markers, glycan 63 (Fuc-a-1,2-Gal-b-1,4-(Fuc-a-1,3)-GlcNAc-b-, also known as Lewis Y epitope) and glycan 69 (Neu5Ac-a-2,6-Gal-b-1,3-(Neu5Ac-a-2,6)-GalNAc-b-). CSC HP-1 and CSC HP-hP1 show higher glycan 63 signal, CSC HP-9, CSC HP-10, CSC HP-11, CSC HP-hP2, and CSC HP-hP3 show higher glycan 69 Signal (Figure 3D). Both Neu5Ac-a-2,6-residues are required for CSC HPs binding (Figure 3E). Based on the foregoing results, CSCs of human pancreatic cancer cell PANC-1 were prepared, and CSC glycan labels of Globo series, SSEA-4 and GbH, CSC glycan labels of milk/isomil series, SSEA-1 and SSEA-5, and Both Louis Y can be confirmed on PANC-1 CSCs by IF test, as shown in Figure 3F.

依據聚醣微陣列數據,CSC HP-1與CSC HP-hP1強力及特異性結合至聚醣26,其係四醣之Globo根結構(root structure)。另一方面,CSC HP5、CSC HP6、CSC HP7、及CSC HP9強力結合至聚醣19,其係乳與新乳根結構四醣類之核心三醣。CSC HP-3與CSC HP-8被認為分別特異於肝臟與結腸之CSCs,發現弱結合至聚醣26。CSC HP-1與CSC HP-hP1係更強力結合至聚醣63,路易斯Y表位,的兩個CSC HP成員。According to the glycan microarray data, CSC HP-1 and CSC HP-hP1 strongly and specifically bind to glycan 26, which is the Globo root structure of the tetrasaccharide. On the other hand, CSC HP5, CSC HP6, CSC HP7, and CSC HP9 are strongly bound to glycan 19, which is the core trisaccharide of milk and new milk root structure tetrasaccharides. CSC HP-3 and CSC HP-8 are believed to be specific to CSCs of liver and colon, respectively, and are found to bind weakly to glycans 26. The CSC HP-1 and CSC HP-hP1 lines bind more strongly to the two CSC HP members of Glycan 63, the Lewis Y epitope.

no

前述發明內容與下述發明詳述可結合附圖閱讀,而有更詳盡地理解。為了說明本發明目的,附圖中顯示出目前較佳的具體實施例。The foregoing summary of the invention and the following detailed description of the invention can be read in conjunction with the drawings for a more detailed understanding. For the purpose of illustrating the present invention, the drawings show currently preferred specific embodiments.

在圖式中:In the diagram:

圖1A顯示癌幹細胞(CSC)歸巢胜肽(HPs)選擇性結合至CSCs。玫瑰紅B (Rhodamine B)標記之CSC HP1 (Rd-CSC HP-1)與CSC HP2 (Rd-CSC HP-2),以及FITC標記之CSC HP11 (FITC-CSC HP-11),係直接用於染色EMT6 CSCs與CCs。細胞以DAPI對比染色。於相同曝光條件下取得螢光影像。Figure 1A shows that cancer stem cells (CSC) homing peptides (HPs) selectively bind to CSCs. Rose Red B (Rhodamine B) marked CSC HP1 (Rd-CSC HP-1) and CSC HP2 (Rd-CSC HP-2), and FITC marked CSC HP11 (FITC-CSC HP-11) are used directly Stain EMT6 CSCs and CCs. Cells were stained with DAPI contrast. Acquire fluorescent images under the same exposure conditions.

圖1B顯示CSC HPs選擇性結合至CSCs。EMT-6、CT26、Hepa1-6、及PANC-1之CSCs係分別以Rd-CSC HP-1、Rd-CSC HP-2、FITC-CSC HP-3、FITC-CSC HP-8、FITC-CSC HP-9、FITC-CSC HP-10、或FITC-CSC HP-11染色。於相同曝光條件下取得螢光影像。Figure 1B shows that CSC HPs selectively bind to CSCs. CMTs of EMT-6, CT26, Hepa1-6, and PANC-1 are respectively Rd-CSC HP-1, Rd-CSC HP-2, FITC-CSC HP-3, FITC-CSC HP-8, FITC-CSC HP-9, FITC-CSC HP-10, or FITC-CSC HP-11 staining. Acquire fluorescent images under the same exposure conditions.

圖2顯示CSC HP-hP1-DsRed結合至PANC-1 CCs與CSCs。CSC HP-hP1-DsRed重組型蛋白,最終濃度為25 μg/mL,係用於染色PANC-1 CCs與CSCs。箭頭代表在PANC-1 CC案例中觀察到的弱信號。Figure 2 shows the binding of CSC HP-hP1-DsRed to PANC-1 CCs and CSCs. CSC HP-hP1-DsRed recombinant protein, with a final concentration of 25 μg/mL, is used to stain PANC-1 CCs and CSCs. The arrows represent the weak signals observed in the PANC-1 CC case.

圖3A-3F顯示聚醣微陣列與免疫螢光(IF)所分析之CSC HPs標靶。圖3A顯示以生物素標記之CSC HP-hP1的聚醣微陣列分析結果。圖3B顯示生物素標記之CSC HP-9的聚醣微陣列分析結果。圖3C顯示Globo系列聚醣(聚醣26)與乳/新乳( Lacto/Neolacto)系列聚醣(聚醣19)信號之相對強度,其係以15個CSC HPs收集之同一微陣列陽性對照組信號3進行標準化。圖3D顯示自15個CSC HPs之聚醣63與聚醣69信號之相對強度。圖3E顯示自CSC HP-10、CSC HP-11、及CSC HP-hP2晶片收集之聚醣66 (Gal-b-1,3-GalNAc-b-)、聚醣67 (Gal-b-1,3-(Neu5Ac-a-2,6)-GalNAc-b-)、聚醣68 (Neu5Ac-a-2,6-Gal-b-1,3-GalNAc-b-)、聚醣69 (Neu5Ac-a-2,6-Gal-b-1,3-(Neu5Ac-a-2,6)-GalNAc-b-)、及聚醣70 (Neu5Ac-a-2,3-Gal-b-1,3-(Neu5Ac-a-2,6)-GalNAc-b-)信號之相對強度。圖3F為PANC-1 CSCs上之幹細胞特異性聚醣標記物的IF影像,其係以抗Globo系列(SSEA-4與GbH)、乳/新乳(Lc/nLc)系列(SSEA-1與SSEA-5)、及路易斯Y (Lewis Y)之單株抗體進行。Figures 3A-3F show CSC HPs targets analyzed by glycan microarray and immunofluorescence (IF). FIG. 3A shows the results of glycan microarray analysis of CSC HP-hP1 labeled with biotin. Figure 3B shows the results of glycan microarray analysis of biotin-labeled CSC HP-9. Figure 3C shows the relative intensity of the signal between Globo series glycans (glycan 26) and milk/new milk ( Lacto/Neolacto) series glycans (glycan 19), which is the same microarray positive control group collected with 15 CSC HPs Signal 3 is standardized. Figure 3D shows the relative intensity of glycan 63 and glycan 69 signals from 15 CSC HPs. Figure 3E shows Glycan 66 (Gal-b-1,3-GalNAc-b-) and Glycan 67 (Gal-b-1, collected from CSC HP-10, CSC HP-11, and CSC HP-hP2 chips 3-(Neu5Ac-a-2,6)-GalNAc-b-), glycan 68 (Neu5Ac-a-2,6-Gal-b-1,3-GalNAc-b-), glycan 69 (Neu5Ac- a-2,6-Gal-b-1,3-(Neu5Ac-a-2,6)-GalNAc-b-), and glycan 70 (Neu5Ac-a-2,3-Gal-b-1,3 -The relative intensity of the (Neu5Ac-a-2,6)-GalNAc-b-) signal. Figure 3F is an IF image of stem cell-specific glycan markers on PANC-1 CSCs, which is based on anti-Globo series (SSEA-4 and GbH), milk/new milk (Lc/nLc) series (SSEA-1 and SSEA -5), and Lewis Y (Lewis Y) monoclonal antibody.

圖4A為流程圖,其顯示自原始M13 PhD7庫之初級篩選,以製備EMT6 CSC HP-庫,以及二級篩選,以產生CT26 CSC HP-庫、Hepa1-6 CSC HP-庫、CSC/ESC HP-庫、及CSC HP-庫。4A is a flow chart showing the primary screening from the original M13 PhD7 library to prepare the EMT6 CSC HP-library, and the secondary screening to generate CT26 CSC HP-library, Hepa1-6 CSC HP-library, CSC/ESC HP -Libraries, and CSC HP-libraries.

圖4B為說明建立PANC-1 CSC HP-庫的流程圖。Figure 4B is a flow chart illustrating the establishment of a PANC-1 CSC HP-library.

no

Figure 12_A0101_SEQ_0001
Figure 12_A0101_SEQ_0002
Figure 12_A0101_SEQ_0003
Figure 12_A0101_SEQ_0004
Figure 12_A0101_SEQ_0001
Figure 12_A0101_SEQ_0002
Figure 12_A0101_SEQ_0003
Figure 12_A0101_SEQ_0004

Claims (13)

一種靶向癌幹細胞之合成胜肽,其係選自於由SEQ ID NOS:1-2及10之胺基酸序列組成之群組,其中,該靶向癌幹細胞之合成胜肽係與一可檢測部分或一治療劑接合。 A synthetic peptide targeting cancer stem cells is selected from the group consisting of amino acid sequences of SEQ ID NOS: 1-2 and 10, wherein the synthetic peptide targeting cancer stem cells is combined with a Ke The detection part or a therapeutic agent is engaged. 如請求項1之合成胜肽,其係接合至一可檢測部分。 If the synthetic peptide of claim 1, it is joined to a detectable part. 如請求項1之合成胜肽,其係接合至一治療劑。 If the synthetic peptide of claim 1, it is conjugated to a therapeutic agent. 如請求項2之合成胜肽,其中該可檢測部分係放射線標記、螢光團、或磁造影對比劑。 The synthetic peptide of claim 2, wherein the detectable portion is a radioactive label, fluorophore, or magnetic contrast agent. 如請求項3之合成胜肽,其中該治療劑係抗腫瘤劑。 The synthetic peptide according to claim 3, wherein the therapeutic agent is an antitumor agent. 如請求項5之合成胜肽,其中該抗腫瘤劑係化學治療劑、放射線治療劑、或免疫治療劑。 The synthetic peptide according to claim 5, wherein the antitumor agent is a chemotherapeutic agent, a radiotherapy agent, or an immunotherapy agent. 一種組合物,其包含如請求項3之合成胜肽及醫藥上可接受之載體或稀釋劑。 A composition comprising the synthetic peptide of claim 3 and a pharmaceutically acceptable carrier or diluent. 一種選自於由SEQ ID NOS:1-3及10之胺基酸序列組成之群組的胜肽的用途,其用於製備檢測或治療癌症的藥物,其中該癌症係選自於由乳癌、結腸癌、肝癌及人類胰臟管腺瘤所組成之群組。 Use of a peptide selected from the group consisting of amino acid sequences of SEQ ID NOS: 1-3 and 10 for preparing a drug for detecting or treating cancer, wherein the cancer is selected from breast cancer, Colon cancer, liver cancer and human pancreatic duct adenoma. 如請求項8之用途,其中該胜肽係接合至一可檢測部分。 The use according to claim 8, wherein the peptide is joined to a detectable portion. 如請求項8之用途,其中該胜肽係接合至一治療劑。 The use as claimed in claim 8, wherein the peptide is conjugated to a therapeutic agent. 如請求項9之用途,其中該可檢測部分係放射線標記、螢光團、或磁造影對比劑。 The use according to claim 9, wherein the detectable portion is a radioactive label, a fluorophore, or a magnetic contrast agent. 如請求項10之用途,其中該治療劑係抗腫瘤劑。 The use according to claim 10, wherein the therapeutic agent is an antitumor agent. 如請求項12之用途,其中該抗腫瘤劑係化學治療劑、放射線治療劑、或免疫治療劑。 The use according to claim 12, wherein the antitumor agent is a chemotherapeutic agent, a radiotherapy agent, or an immunotherapy agent.
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