TWI573803B - Tumor specific antigen, recombinant protein, antibody, and primer threrof, and the method for identifying mammalian tumors - Google Patents

Tumor specific antigen, recombinant protein, antibody, and primer threrof, and the method for identifying mammalian tumors Download PDF

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TWI573803B
TWI573803B TW104127695A TW104127695A TWI573803B TW I573803 B TWI573803 B TW I573803B TW 104127695 A TW104127695 A TW 104127695A TW 104127695 A TW104127695 A TW 104127695A TW I573803 B TWI573803 B TW I573803B
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tumor
sequence
primer
antigen
melanoma
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TW201708252A (en
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張仕杰
徐維莉
陳易辰
廖俊旺
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國立中興大學
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腫瘤特異性抗原、其重組蛋白、抗體及引 子對以及檢測哺乳類動物腫瘤之方法 Tumor-specific antigen, recombinant protein, antibody and Pair pair and method for detecting mammalian tumors

本發明係關於一種腫瘤特異性抗原、其重組蛋白、抗體及引子對,以及檢測哺乳類動物腫瘤之方法。特別是有關於一種黑色素細胞瘤抗原、其重組蛋白、抗體及引子對,以及利用黑色素瘤細胞瘤抗原以檢測哺乳類動物腫瘤之方法。 The present invention relates to a tumor-specific antigen, a recombinant protein thereof, an antibody and a primer pair, and a method for detecting a mammalian tumor. In particular, it relates to a melanoma tumor antigen, a recombinant protein thereof, an antibody and a primer pair, and a method for detecting a mammalian tumor using a melanoma cell tumor antigen.

腫瘤在醫學上指細胞的異常病變,是在各種致癌因素作用下,局部組織的細胞在基因水平上失去對其生長的正常調控。這一種病變,使身體部分細胞呈現不受控制的增生,導致異常增生而形成的新生物,許多時會集結成為腫瘤。一般認為,一個腫瘤中的所有腫瘤細胞均是一個突變的細胞的後代。 Tumors are medically referred to as abnormal lesions of cells. Under the action of various carcinogenic factors, cells of local tissues lose their normal regulation of growth at the genetic level. This kind of disease causes new parts of the body to exhibit uncontrolled hyperplasia, resulting in abnormal proliferation, and many of them will accumulate into tumors. It is generally believed that all tumor cells in a tumor are descendants of a mutant cell.

腫瘤為文明社會死亡的重要原因。腫瘤的診斷步驟和方法,係透過通過全面、系統的病史詢問,詳盡細緻如以實驗室檢測、內視鏡或影像學體驗檢查,然後進行綜合分析。但某些腫瘤在未能以精密儀器檢測出的階段已發生轉移,常導致後續治療失效。因此需要更早尋獲不正常的病灶,以早期診斷及治療腫瘤。 Tumors are an important cause of death in civil society. Tumor diagnosis procedures and methods are thoroughly detailed, such as laboratory testing, endoscopy or imaging experience, through comprehensive, systematic medical history enquiries, followed by comprehensive analysis. However, some tumors have metastasized at a stage that has not been detected by precision instruments, often resulting in failure of subsequent treatment. Therefore, it is necessary to find abnormal lesions earlier to diagnose and treat tumors at an early stage.

目前於醫學研究上已有多種腫瘤標記可於早期檢測出腫瘤的存在。腫瘤標記係為患者出現腫瘤的異常現象,包括了腫瘤細胞本身產生或分泌的物質,或與正常細胞對腫瘤存在產生的反應物質或代謝產物。腫瘤標記可經由身上的體液,如血液。腹水、尿液、組織切片等方式檢驗得知。因此腫瘤標記可能是蛋白質、荷爾蒙、腫瘤抗原或是正常細胞即有的酵素。例如CA125被美國藥物暨食物管理局(FDA)所認可作為卵巢癌的腫瘤標記。但目前發現的腫瘤標記僅能作為其中一種或數種腫瘤的指標,需同時檢測多個腫瘤標記才能全面確認患者是否存在腫瘤。 At present, a variety of tumor markers have been found in medical research to detect the presence of tumors at an early stage. A tumor marker is an abnormal phenomenon in a patient's tumor, including a substance produced or secreted by the tumor cell itself, or a reaction substance or a metabolite produced by the normal cell to the tumor. Tumor markers can pass through body fluids such as blood. Ascites, urine, tissue sections and other methods were tested. Therefore, the tumor marker may be a protein, a hormone, a tumor antigen or an enzyme present in a normal cell. For example, CA125 is recognized by the US Food and Drug Administration (FDA) as a tumor marker for ovarian cancer. However, the tumor markers currently found can only be used as an indicator of one or several tumors. It is necessary to simultaneously detect multiple tumor markers in order to fully confirm whether a patient has a tumor.

因此,本發明提供一種黑色素細胞瘤抗原、其重組蛋白、抗體及引子對,以及檢測哺乳類動物腫瘤之方法。可以快速、全面的檢測哺乳類動物腫瘤。 Accordingly, the present invention provides a melanoma tumor antigen, a recombinant protein thereof, an antibody and a primer pair, and a method of detecting a mammalian tumor. It can quickly and comprehensively detect mammalian tumors.

本發明之第一態樣是在提供一種單離的黑色素細胞瘤抗原蛋白質,其胺基酸序列如序列辨識編號2所示。 A first aspect of the present invention provides an isolated melanoblastoma antigen protein having an amino acid sequence as shown in SEQ ID NO: 2.

本發明之第二態樣是在一種單離的核酸,其序列如序列辨識編號1所示,係編碼本發明之黑色素細胞瘤抗原蛋白質。 A second aspect of the present invention is an isolated nucleic acid having a sequence as shown in SEQ ID NO: 1, which encodes a melanoblastoma antigen protein of the present invention.

本發明之第三態樣是在提供一種表現載體,其包含本發明之單離的核酸。 A third aspect of the invention is to provide an expression vector comprising the isolated nucleic acid of the invention.

本發明之第四態樣是在提供一種宿主細胞,其轉形本發明之表現載體。 A fourth aspect of the invention provides a host cell which is transformed into an expression vector of the invention.

依據前述之宿主細胞,其中宿主細胞為大腸桿菌。 According to the aforementioned host cell, wherein the host cell is Escherichia coli.

本發明之第五態樣是在提供一種重組黑色素細胞瘤抗原蛋白之製造方法,其包含培養本發明之宿主細胞,以獲得重組黑色素細胞瘤抗原蛋白。 A fifth aspect of the present invention provides a method for producing a recombinant melanoma tumor antigen protein comprising culturing a host cell of the present invention to obtain a recombinant melanoma tumor antigen protein.

本發明之第六態樣是在提供一種重組黑色素細胞瘤抗原蛋白,其胺基酸序列如序列辨識編號9所示,並係以本發明之製造方法製備。 A sixth aspect of the present invention provides a recombinant melanoma tumor antigen protein having an amino acid sequence as shown in SEQ ID NO: 9, and which is produced by the production method of the present invention.

藉此,本發明提供一種黑色素細胞瘤抗原及其重組蛋白,其係一種腫瘤特異性抗原。黑色素細胞瘤抗原於正常組織只表現於睪丸及胎盤,但於多種不同的腫瘤中皆能發現黑色素細胞瘤抗原的表現,為一種理想的腫瘤標記。 Accordingly, the present invention provides a melanoma tumor antigen and a recombinant protein thereof which are a tumor-specific antigen. The melanoma antigen is expressed in the normal tissue only in the testis and placenta, but the expression of melanoma antigen can be found in many different tumors, which is an ideal tumor marker.

本發明之第七態樣是在提供一種單離的抗體,其對本發明之重組黑色素細胞瘤抗原蛋白具有結合親和力。 A seventh aspect of the present invention is to provide an isolated antibody having binding affinity to the recombinant melanoma tumor antigen protein of the present invention.

本發明之第八態樣是在提供一種用於檢測哺乳類動物之腫瘤之引子對,係由根據序列辨識編號1所示之核酸而設計之一順向引子及一反向引子所組成,其中順向引子之序列係選自於由序列辨識編號3及序列辨識編號5所示序列所組成之一族群,反向引子之序列係選自於由序列辨識編號4及序列辨識編號6所示序列所組成之一族群。 An eighth aspect of the present invention provides a primer pair for detecting a tumor of a mammal, which is composed of a forward primer and a reverse primer according to the nucleic acid shown in Sequence Identification No. 1, wherein The sequence of the primer is selected from the group consisting of sequence identification number 3 and sequence identification number 5, and the sequence of the reverse primer is selected from the sequence indicated by sequence identification number 4 and sequence identification number 6. Form a group of people.

本發明之第九態樣是在提供一種用於活體外檢測哺乳類動物之腫瘤之方法,包含:提供一生物性樣品,以及進行一檢測方法,以檢測生物性樣品是否含有一黑色素細胞瘤抗原核酸或一黑色素細胞瘤抗原蛋白質。 A ninth aspect of the present invention provides a method for detecting a tumor of a mammal in vitro, comprising: providing a biological sample, and performing a detection method for detecting whether the biological sample contains a melanoma antigen nucleic acid Or a melanoma antigen protein.

依據前述用於活體外檢測哺乳類動物之腫瘤之方法,其中哺乳類動物為犬(Canis lupus)。 According to the aforementioned method for in vitro detection of a tumor of a mammal, wherein the mammal is a canine ( Canis lupus ).

依據前述用於活體外檢測哺乳類動物之腫瘤之方法,其中生物性樣品係選自由腫瘤組織、腫瘤周邊組織、體液及滲出液所組成之群組。 According to the aforementioned method for in vitro detection of a tumor of a mammal, wherein the biological sample is selected from the group consisting of tumor tissue, tumor surrounding tissue, body fluid, and exudate.

依據前述用於活體外檢測哺乳類動物之腫瘤之方法,其中黑色素細胞瘤抗原核酸具有如序列辨識編號1所示或其互補之序列,黑色素細胞瘤抗原蛋白質具有如序列辨識編號2所示之序列。 According to the aforementioned method for in vitro detection of a tumor of a mammal, wherein the melanoma antigen nucleic acid has a sequence as shown in SEQ ID NO: 1, or a sequence complementary thereto, and the melanoma antigen protein has a sequence as shown in SEQ ID NO: 2.

依據前述用於活體外檢測哺乳類動物之腫瘤之方法,其中檢測方法可為逆轉錄聚合酶連鎖反應 (RT-PCR)、巢式聚合酶連鎖反應(nested PCR)、免疫組織化學染色法、酵素連結免疫吸附法(ELISA)或西方墨點法。 According to the foregoing method for detecting a tumor of a mammal in vitro, wherein the detection method may be a reverse transcription polymerase chain reaction (RT-PCR), nested polymerase chain reaction (nested PCR), immunohistochemical staining, enzyme-linked immunosorbent assay (ELISA) or Western blotting.

依據前述用於活體外檢測哺乳類動物之腫瘤之方法,其中nested PCR更包含下列步驟:自生物性樣品萃取出總RNA;使用第一引子對與總RNA進行RT-PCR,以獲得RT-PCR產物,其中第一引子對由具有序列辨識編號3所示之序列的引子與具有序列辨識編號4所示之序列的引子組成;使用第二引子對與RT-PCR產物進行nested PCR,以獲得nested PCR產物,其中第二引子對由具有序列辨識編號5所示之序列的引子與具有序列辨識編號6所示之序列的引子組成;以及利用瓊脂膠體電泳偵測nested PCR產物是否有具有一相同或互補如序列辨識編號1所示之核酸之部分核苷酸序列。 According to the aforementioned method for detecting a tumor of a mammal in vitro, wherein the nested PCR further comprises the steps of: extracting total RNA from the biological sample; performing RT-PCR with the total RNA using the first primer pair to obtain an RT-PCR product Wherein the first primer pair consists of a primer having the sequence shown in SEQ ID NO: 3 and a primer having the sequence shown in SEQ ID NO: 4; using a second primer pair to perform nested PCR with the RT-PCR product to obtain nested PCR a product, wherein the second primer pair consists of a primer having the sequence of SEQ ID NO: 5 and a primer having the sequence of SEQ ID NO: 6; and detecting whether the nested PCR product has the same or complementary by agar gel electrophoresis A partial nucleotide sequence of a nucleic acid as shown in Sequence Identification No. 1.

藉此,本發明提供一種檢測哺乳類動物腫瘤的方法,無論採用逆轉錄聚合酶連鎖反應、巢式聚合酶連鎖反應、免疫組織化學染色法或西方墨點法,皆可準確、快速且全面地檢測哺乳類動物腫瘤,用以解決傳統檢測哺乳類動物腫瘤於病理型態學無法早期發現,及解決全面檢查需檢測多個腫瘤標記的耗事費時等問題。 Accordingly, the present invention provides a method for detecting a tumor of a mammal, which can be accurately, rapidly and comprehensively detected by using a reverse transcription polymerase chain reaction, a nested polymerase chain reaction, an immunohistochemical staining method or a Western blot method. Mammalian tumors are used to solve the problems of traditional detection of mammalian tumors that cannot be detected early in pathological morphology, and to solve the problem of time-consuming and time-consuming for comprehensive examination of multiple tumor markers.

上述發明內容旨在提供本揭示內容的簡化摘要,以使閱讀者對本揭示內容具備基本的理解。此發明內容並非本揭示內容的完整概述,且其用意並非在指出本發明實施例的重要/關鍵元件或界定本發明的範圍。 The Summary of the Invention is intended to provide a simplified summary of the present disclosure in order to provide a basic understanding of the disclosure. This Summary is not an extensive overview of the disclosure, and is not intended to be an

為讓本發明之上述和其他目的、特徵、優點與實施例能更明顯易懂,所附圖式之說明如下:第1圖為本發明之黑色素細胞瘤抗原之瓊脂電泳圖;第2圖為本發明之表現載體pET-44a/MAGE-A2經IPTG誘導後不同培養條件之蛋白質表現分析圖;第3圖為本發明之重組黑色素細胞瘤抗原蛋白各純化步驟之蛋白質表現分析圖;第4圖為本發明之抗體之西方墨點法轉漬圖;第5圖為本發明之抗體之酵素連結免疫吸附法分析圖。 The above and other objects, features, advantages and embodiments of the present invention will become more <RTIgt; <RTIgt; </ RTI> <RTIgt; </ RTI> <RTIgt; </ RTI> <RTIgt; The protein expression analysis chart of different expression conditions of the expression vector pET-44a/MAGE-A2 of the present invention induced by IPTG; Fig. 3 is a diagram showing the protein expression analysis of each purification step of the recombinant melanoma tumor antigen protein of the present invention; The western blot method of the antibody of the present invention is shown in Fig. 5; and Fig. 5 is an analysis diagram of the enzyme-linked immunosorbent assay of the antibody of the present invention.

本說明書揭露內容提出一種新穎腫瘤特異性抗原,以及根據此腫瘤特異性抗原設計之重組蛋白、抗體、檢測哺乳類腫瘤之引子對及腫瘤檢測哺乳類動物腫瘤之方法。其係於哺乳類動物腫瘤組織中發現一新穎腫瘤特異性抗原,經由遺傳工程技術構築包含此腫瘤特異性抗原之表現載體,可高產量表現於宿主細胞中以獲得重組腫瘤特異性抗原蛋白,並以此重組腫瘤特異性抗原蛋白作為抗原,製備與此腫瘤特異性抗原具有親合力之抗體。此腫瘤特異性抗原於哺乳類動物正常組織中僅特定表現於睪丸和胎盤,卻廣泛表現於各種腫瘤組織中。因此可以將此腫瘤特異性抗原使用於哺乳類動物腫瘤檢測試驗,例如使用根據此腫瘤特異性抗原設 計之引子對或抗體等,檢測此腫瘤特異性抗原之核酸或蛋白質,足以敏感地檢測低程度的腫瘤並排除大部分的非癌症或是臨床上非具意義之患者。 The disclosure of the present specification provides a novel tumor-specific antigen, a recombinant protein designed according to the tumor-specific antigen, an antibody, a primer pair for detecting a mammalian tumor, and a method for detecting a tumor of a mammal. It is a novel tumor-specific antigen found in mammalian tumor tissues, and the expression vector containing the tumor-specific antigen is constructed by genetic engineering technology, and can be expressed in a host cell in a high yield to obtain a recombinant tumor-specific antigen protein, and The recombinant tumor-specific antigen protein is used as an antigen to prepare an antibody having affinity with the tumor-specific antigen. This tumor-specific antigen is only specifically expressed in the testis and placenta in normal tissues of mammals, but is widely expressed in various tumor tissues. Therefore, the tumor-specific antigen can be used in a mammalian tumor detection test, for example, using a tumor-specific antigen set. The detection of the nucleic acid or protein of the tumor-specific antigen is sufficient to sensitively detect a low degree of tumor and exclude most non-cancer or clinically non-meaning patients.

本發明前述之「抗原」一詞係指一種含有一或多個會刺激宿主的免疫系統製造體液,及/或細胞抗原專一性反應之物質。與適當細胞接觸後之結果,抗原會誘發一種敏感或免疫反應的狀態,並以可論證的方式與受敏化個體之抗體或免疫細胞,於活體內或活體外進行反應。抗體可被生物個體內之抗體專一地辨識及結合。與主要組織相容性複合體(MHC)締合之抗原,亦可被位於T淋巴細胞表面上之受體辨識及結合,而導致T-淋巴細胞活化。 The term "antigen" as used herein refers to a substance that contains one or more immune systems that stimulate the host to produce bodily fluids, and/or cellular antigen-specific responses. As a result of contact with appropriate cells, the antigen induces a state of sensitivity or immune response and reacts in an arguable manner with antibodies or immune cells of the sensitized individual, either in vivo or ex vivo. Antibodies can be specifically identified and bound by antibodies within a biological individual. Antigens associated with major histocompatibility complex (MHC) can also be recognized and bound by receptors located on the surface of T lymphocytes, resulting in T-lymphocyte activation.

本發明前述之「抗體」一詞係指一種具有特定胺基酸序列,且僅和一種或一群密切相關之抗原結合之免疫球蛋白分子,或免疫球蛋白分子之至少一具有免疫活性的部份。係由B-淋巴球細胞分泌,被免疫系統用來鑑別與中和外來抗原。抗體之實例包括IgG、IgM、IgA、IgD及IgE。免疫球蛋白分子之具有免疫活性的部份實例包括Fab及F(ab)'2。抗體可為單株抗體或多株抗體。 The term "antibody" as used herein refers to an immunoglobulin molecule having a specific amino acid sequence and which is only associated with one or a group of closely related antigens, or at least one immunologically active portion of an immunoglobulin molecule. . It is secreted by B-lymphocytes and used by the immune system to identify and neutralize foreign antigens. Examples of antibodies include IgG, IgM, IgA, IgD, and IgE. Examples of immunologically active portions of immunoglobulin molecules include Fab and F(ab)' 2 . The antibody may be a single antibody or a plurality of antibodies.

本發明前述之「腫瘤特異性抗原」係指腫瘤抗原之一種。腫瘤抗原泛指在腫瘤發生、發展過程中新出現或過度表達的抗原物質,而可依抗原的特異性分為腫瘤特異性抗原和腫瘤相關性抗原。腫瘤特異性抗原係指此腫瘤抗原僅表達於腫瘤組織,而不存在於正常組織中。腫瘤相關性抗原係指此腫瘤抗原存在於腫瘤組織或細胞中,同時也可表現正 常組織或細胞中,但於腫瘤組織或細胞的表現量遠超過正常組織或細胞的表現量。 The "tumor-specific antigen" as used in the present invention refers to one of tumor antigens. Tumor antigens generally refer to antigenic substances that are newly or overexpressed during tumorigenesis and development, and can be classified into tumor-specific antigens and tumor-associated antigens according to the specificity of the antigen. Tumor-specific antigen means that the tumor antigen is expressed only in tumor tissue and not in normal tissues. Tumor-associated antigen means that the tumor antigen is present in the tumor tissue or cells, and can also be positive. Often in tissues or cells, but in tumor tissues or cells, the amount of expression far exceeds that of normal tissues or cells.

本發明前述之「黑色素細胞瘤抗原」係指Melanoma antigen-A(MAGE-A),為皮膚黑色素瘤的抗原,由80個胺基酸所組成,大小約為18KDa。黑色素細胞瘤抗原於1991年首度被發現,其中包含12個基因可編碼MAGE-A:MAGE-A1到MAGE-A12。黑色素細胞瘤抗原為一種癌症睪丸抗原(cancer-testis antigens,CT antigens),是胎兒發育時期的抗原,於正常組織只表現於睪丸及胎盤,但在多種不同的腫瘤中皆可發現黑色素細胞瘤抗原的表現,是一種腫瘤特異性抗原,因此是非常理想的腫瘤標記。 The aforementioned "melanoma antigen" of the present invention refers to Melanoma antigen-A (MAGE-A), which is an antigen of cutaneous melanoma, which is composed of 80 amino acids and has a size of about 18 kDa. The melanoma antigen was first discovered in 1991 and contained 12 genes encoding MAGE-A: MAGE-A1 to MAGE-A12. Melanoma tumor antigen is a cancer-testis antigens (CT antigens), which is an antigen during fetal development. It is expressed only in testicular and placenta in normal tissues, but melanoma antigens can be found in many different tumors. The performance is a tumor-specific antigen and is therefore an ideal tumor marker.

茲以下列具體試驗例進一步示範說明本發明,用以有利於本發明所屬技術領域通常知識者,可在不需過度解讀的情形下完整利用並實踐本發明,而不應將這些試驗例視為對本發明範圍的限制,但用於說明如何實施本發明的材料及方法。 The present invention will be further exemplified in the following specific examples to facilitate the general knowledge of the art to which the present invention pertains, and the present invention may be fully utilized and practiced without undue interpretation. The scope of the invention is limited, but is intended to illustrate how to practice the materials and methods of the invention.

一、重組黑色素細胞瘤抗原蛋白之製備I. Preparation of recombinant melanoma tumor antigen protein 試驗例1-1:構築重組黑色素細胞瘤抗原蛋白表現載體Test Example 1-1: Construction of recombinant melanoblastoma antigen protein expression vector

本試驗例首先根據GenBank中犬的MAGE-A相關基因序列的保留區設計第一引子對,第一引子對係由如序列辨識編號3所示序列之引子及如序列辨識編號4所示序列之引子構成。以犬(Canis lupus)的多種腫瘤組織為模版,使用第一引子對進行第一次聚合酶連鎖反應。聚合酶連 鎖反應之反應物及試劑依下述比例進行:2.5μl Run-Fast Taq Master kit(Protech,Taipei,Taiwan)、5μM之引子各1μl和2μl的cDNA,最後加入滅菌之二次去離子水,調整總體積為25μl,將溶液混合均勻後進行第一次聚合酶連鎖反應。反應條件為變性94℃反應5分鐘,接著進行35個周期之熱循環,包括變性94℃反應1分鐘、黏合57℃反應1分鐘、延長72℃反應1.5分鐘,之後進行最終延長72℃反應7分鐘,終止溫度為4℃。增幅出之DNA片段以洋菜瓊脂電泳分離,並以回收試劑純化增幅出之DNA備用。增幅出之DNA經由核酸自動定序儀(Automatic sequencer)確定序列。 In this test, the first primer pair was first designed according to the reserved region of the MAGE-A related gene sequence of the dog in GenBank. The first primer pair was introduced by the sequence of sequence identification number 3 and the sequence shown by sequence identification number 4. The composition of the primer. Using the various tumor tissues of canine ( Canis lupus ) as a template, the first polymerase chain reaction was performed using the first primer pair. The polymerase chain reaction reagents and reagents were carried out in the following ratios: 2.5 μl Run-Fast Taq Master kit (Protech, Taipei, Taiwan), 5 μM primers, 1 μl and 2 μl of cDNA, and finally sterilized secondary deionized water. The total volume was adjusted to 25 μl, and the solution was mixed uniformly to carry out the first polymerase chain reaction. The reaction conditions were denaturation at 94 ° C for 5 minutes, followed by 35 cycles of thermal cycling, including denaturation at 94 ° C for 1 minute, adhesion at 57 ° C for 1 minute, extension at 72 ° C for 1.5 minutes, followed by a final extension of 72 ° C for 7 minutes. The termination temperature was 4 °C. The amplified DNA fragment was separated by electrophoresis on agar extract and the amplified DNA was purified by a recovery reagent. The amplified DNA is sequenced via an automated nucleic acid sequencer.

請參照第1圖,為本發明之黑色素細胞瘤抗原之洋菜瓊脂電泳圖,其中『M』為DNA之分子量標記。(A)部分為第一次聚合酶連鎖反應所增幅之DNA片段,泳道1至3為傳染性花柳性腫瘤樣本,泳道4至5為纖維組織肉瘤樣本,泳道6為脂肪肉瘤樣本。結果顯示,第一引子對可於上述樣本增幅出大小約為400bp的DNA片段。但經核酸自動定序儀分析第一次聚合酶連鎖反應所增幅出產物之DNA序列時,發現不同腫瘤組織來源所增幅出的產物,彼此之間具有DNA序列的變異度。 Please refer to FIG. 1 , which is a gel electrophoresis diagram of the melanoma antigen of the present invention, wherein “M” is a molecular weight marker of DNA. (A) is a DNA fragment amplified by the first polymerase chain reaction, lanes 1 to 3 are infectious mosaic tumor samples, lanes 4 to 5 are fibrous tissue sarcoma samples, and lane 6 is a liposarcoma sample. The results showed that the first primer pair could increase the DNA fragment of about 400 bp in size. However, when the DNA sequence of the product amplified by the first polymerase chain reaction was analyzed by the nucleic acid automatic sequencer, the products of different tumor tissue sources were found to have the variability of the DNA sequence.

因此本試驗例再進一步將第一次聚合酶連鎖反應所增幅出之DNA序列放在一起比對分析保留區,以設計 第二引子對,第二引子對係由如序列辨識編號5所示序列之引子及如序列辨識編號6所示序列之引子構成。以第一次聚合酶連鎖反應所增幅出之DNA為模板,使用第二引子對進行第二次聚合酶連鎖反應。聚合酶連鎖反應之反應物及試劑依下述比例進行:5μl Run-Fast Taq Master kit、5μM之引子各1μl和2μl的cDNA,最後加入滅菌之二次去離子水,調整總體積為25μl,將溶液混合均勻後進行第二次聚合酶連鎖反應。反應條件為變性94℃反應5分鐘,接著進行35個周期之熱循環,包括變性94℃反應1分鐘、黏合60℃反應1分鐘、延長72℃反應1分鐘,之後進行最終延長72℃反應7分鐘,終止溫度為4℃。所增幅出之DNA片段序列如序列辨識編號1所示,即為本發明之黑色素細胞瘤抗原,於5端具有限制酶NdeI切位,3端具有限制酶XhoI切位,其所編碼之黑色素細胞瘤抗原蛋白質之序列如序列辨識編碼2所示。 Therefore, in this test example, the DNA sequence amplified by the first polymerase chain reaction is further put together to analyze the reserved region to design a second primer pair, and the second primer pair is sequenced as shown in sequence identification number 5. The primer and the primer of the sequence shown in the sequence identification number 6 are constructed. The second polymerase chain reaction was performed using the second primer pair using the DNA amplified by the first polymerase chain reaction as a template. The polymerase chain reaction reagents and reagents were carried out in the following ratios: 5 μl Run-Fast Taq Master kit, 5 μM primers, 1 μl and 2 μl of cDNA, and finally sterilized secondary deionized water, adjusted to a total volume of 25 μl. After the solution is mixed uniformly, a second polymerase chain reaction is carried out. The reaction conditions were denaturation at 94 ° C for 5 minutes, followed by 35 cycles of thermal cycling, including denaturation at 94 ° C for 1 minute, adhesion at 60 ° C for 1 minute, extension at 72 ° C for 1 minute, followed by a final extension of 72 ° C for 7 minutes. The termination temperature was 4 °C. The amplified DNA fragment sequence is shown in SEQ ID NO: 1, which is the melanocytoma antigen of the present invention, which has a restriction enzyme Nde I cleavage at the 5th end and a restriction enzyme Xho I cleavage at the 3 end, which is encoded by The sequence of the melanoma antigen protein is shown in Sequence Identification Code 2.

再以第一次聚合酶連鎖反應所增幅出之DNA為模板,使用如序列辨識編號7所示序列之引子及如序列辨識編號6所示序列之引子進行第三次聚合酶連鎖反應。聚合酶連鎖反應之反應物及試劑依下述比例進行:5μl Run-Fast Taq Master kit、5μM之引子各1μl和2μl的cDNA,最後加入滅菌之二次去離子水,調整總體積為25μl,將溶液混合均勻後進行第三次聚合酶連鎖反應。反應條 件為變性94℃反應5分鐘,接著進行35個周期之熱循環,包括變性94℃反應1分鐘、黏合63℃反應1分鐘、延長72℃反應1分鐘,之後進行最終延長72℃反應7分鐘,終止溫度為4℃。所增幅之片段於5端具有限制酶SalI切位,3端具有限制酶XhoI切位。 The third polymerase chain reaction was carried out by using the DNA amplified by the first polymerase chain reaction as a template, using a primer such as the sequence of the sequence identification number 7 and a primer of the sequence of the sequence identification number 6. The polymerase chain reaction reagents and reagents were carried out in the following ratios: 5 μl Run-Fast Taq Master kit, 5 μM primers, 1 μl and 2 μl of cDNA, and finally sterilized secondary deionized water, adjusted to a total volume of 25 μl. After the solution was mixed well, a third polymerase chain reaction was carried out. The reaction conditions were denaturation at 94 ° C for 5 minutes, followed by 35 cycles of thermal cycling, including denaturation at 94 ° C for 1 minute, adhesion at 63 ° C for 1 minute, extension at 72 ° C for 1 minute, followed by a final extension of 72 ° C for 7 minutes. The termination temperature was 4 °C. The amplified fragment has a restriction enzyme Sal I cleavage at the 5 terminus and a restriction enzyme Xho I cleavage at the 3 terminus.

請再參照第1圖,為本發明之黑色素細胞瘤抗原之瓊脂電泳圖,其中『M』為DNA之分子量標記。(B)部分為第二次聚合酶連鎖反應所增幅出的DNA片段,大小約為280bp。(C)部分為第三次連鎖反應所增幅出的DNA片段,大小約為280bp。且以核酸自動定序儀分析第二次聚合酶連鎖反應所增幅出產物之DNA序列(如序列辨識編號1所示),確定本發明如序列辨識編號1所示之單離的核酸,為不同腫瘤組織來源之黑色素細胞瘤抗原變異度最小之區域,亦即為12種MAGE-A(MAGE-A1至MAGE-A12)彼此之間變異度最小之區域,顯示其具有同時檢測多種腫瘤,以全面確認患者是否存在腫瘤的潛力。 Please refer to FIG. 1 again for the agarose electrophoresis pattern of the melanoma tumor antigen of the present invention, wherein "M" is a molecular weight marker of DNA. Part (B) is a DNA fragment amplified by a second polymerase chain reaction reaction, which is about 280 bp in size. Part (C) is a DNA fragment amplified by the third chain reaction, which is about 280 bp in size. And analyzing the DNA sequence of the amplified product of the second polymerase chain reaction by the nucleic acid automatic sequencer (as shown in the sequence identification number 1), and determining that the isolated nucleic acid of the present invention is different according to the sequence identification number 1. The region with the least variability of tumor tissue-derived melanoma tumor antigen, which is the region with the least variability between the 12 MAGE-A (MAGE-A1 to MAGE-A12), shows that it has multiple tumors simultaneously. Confirm the patient's potential for tumors.

為構築包含重組黑色素細胞瘤抗原之表現載體,先將第二次聚合酶連鎖反應所增幅之DNA片段以限制酶NdeI/XhoI截切,再與經同樣限制酶截切的載體pET-44a(Novagen),利用T4接合酶(T4 DNA ligase)以適當莫耳數比例進行接合,得到包含重組黑色素細胞瘤抗原之表現載體pET-44a/MAGE-A。再將第三次聚合酶連鎖反 應所增幅之DNA片段以限制酶SalI/XhoI截切,再與經同樣限制酶截切的表現載體pET-44a/MAGE-A,利用T4接合酶(T4 DNA ligase)以適當莫耳數比例進行接合,得到構築完成包含二重覆之重組黑色素細胞瘤抗原之表現載體pET-44a/MAGE-A2,並以核酸自動定序儀確認序列的正確性。其中經兩次接合後,表現載體pET-44a/MAGE-A2之內插子(insert)DNA片段之序列如序列辨識編號8所示,即為本發明之重組黑色素細胞瘤抗原,其所編碼之重組黑色素細胞瘤抗原蛋白之序列如序列辨識編號9所示。 In order to construct a expression vector comprising a recombinant melanoma antigen, the DNA fragment amplified by the second polymerase chain reaction is first cut with restriction enzyme Nde I/ Xho I, and then cET-44a is cleaved with the same restriction enzyme. (Novagen), ligated with T4 ligase at a suitable molar ratio to obtain a expression vector pET-44a/MAGE-A containing a recombinant melanoblastoma antigen. The DNA fragment amplified by the third polymerase chain reaction was then cleaved with the restriction enzyme Sal I/ Xho I, and the expression vector pET-44a/MAGE-A, which was cleaved by the same restriction enzyme, was used to utilize T4 ligase (T4). The DNA ligase was ligated at an appropriate molar ratio to obtain a expression vector pET-44a/MAGE-A2 which was constructed to contain a double-recombinant melanoblastoma antigen, and the sequence correctness was confirmed by a nucleic acid automatic sequencer. Wherein, after two ligation, the sequence of the insert DNA fragment of the expression vector pET-44a/MAGE-A2 is as shown in SEQ ID NO: 8, which is the recombinant melanoma antigen of the present invention, which is encoded. The sequence of the recombinant melanoma antigenic protein is shown in Sequence Identification No. 9.

試驗例1-2:表現重組黑色素細胞瘤抗原蛋白Test Example 1-2: Expression of recombinant melanoma antigenic protein

將表現載體pET-44a/MAGE-A2轉形至大腸桿菌株BL21中,所得之大腸桿菌轉形株培養於37℃添加ampicillin的LB(Luria-Bertani)培養液中,當OD600之吸光值到達0.6至1.0時加入最終濃度為0.8mM的異丙基-β-D-硫代半乳糖苷(IPTG),IPTG可誘導具有T7啟動子的表現載體pET-44a/MAGE-A2表現重組黑色素細胞瘤抗原蛋白於細胞質中。經IPTG誘導後,再將菌液培養於28℃或37℃的培養箱中5至16小時。 The expression vector pET-44a/MAGE-A2 was transformed into E. coli strain BL21, and the obtained E. coli transformed strain was cultured in LB (Luria-Bertani) culture medium supplemented with ampicillin at 37 ° C, and the absorbance of OD 600 was reached. Adding isopropyl-β-D-thiogalactoside (IPTG) at a final concentration of 0.8 mM from 0.6 to 1.0, IPTG can induce expression vector pET-44a/MAGE-A2 with T7 promoter to express recombinant melanoma The antigenic protein is in the cytoplasm. After induction by IPTG, the bacterial solution was cultured in an incubator at 28 ° C or 37 ° C for 5 to 16 hours.

分別以電白質電泳和西方墨點法,分析表現載體pET-44a/MAGE-A2經IPTG誘導後不同培養條件之蛋白質表現。西方墨點法所使用的一級抗體為His-tag抗體。請參照第2圖,(A)部分為蛋白質電泳圖,其中『M』為蛋 白質之分子量標記,(B)部分為西方墨點轉漬圖。泳道1為未經IPTG誘導之負對照組,泳道2為誘導後於28℃培養5小時的組別,泳道3為誘導後於28℃培養10小時的組別,泳道4為誘導後於28℃隔夜培養的組別,泳道5為誘導後於37℃培養5小時的組別,泳道6為誘導後於37℃培養10小時的組別,泳道7為誘導後於37℃隔夜培養的組別。結果顯示,未經IPTG誘導的負對照組沒有重組黑色素細胞瘤抗原蛋白的表現,而經IPTG誘導的組別,在6種不同的生長條件皆可表現重組黑色素細胞瘤抗原蛋白。 The protein performance of the expression vector pET-44a/MAGE-A2 induced by IPTG was analyzed by electrophoresis and Western blotting. The primary antibody used in the Western blotting method is a His-tag antibody. Please refer to Figure 2, part (A) is the protein electrophoresis map, where "M" is the egg The molecular weight of the white matter is marked, and the part (B) is the western blotting map. Lane 1 is a negative control group not induced by IPTG, Lane 2 is a group cultured at 28 ° C for 5 hours after induction, Lane 3 is a group cultured at 28 ° C for 10 hours after induction, and Lane 4 is at 28 ° C after induction. In the group cultured overnight, lane 5 was a group cultured at 37 ° C for 5 hours after induction, lane 6 was a group cultured at 37 ° C for 10 hours after induction, and lane 7 was a group cultured overnight at 37 ° C after induction. The results showed that the negative control group induced by IPTG did not have the expression of recombinant melanoma tumor antigen protein, while the group induced by IPTG could express recombinant melanoma tumor antigen protein under 6 different growth conditions.

試驗例1-3:純化重組黑色素細胞瘤抗原蛋白Test Example 1-3: Purification of recombinant melanoma tumor antigen protein

將培養液離心並棄除上清液收集菌塊,以10ml結合緩衝溶液〔50mM Tris、10mM咪唑(imidazole)〕將菌塊回溶為懸浮之菌體,再以冷凍-解凍方法破菌體之細胞壁,並加入200μl濃度為20mg/ml之溶菌酶(lysozyme)幫助破菌體之細胞壁。破菌液置於37℃ 20分鐘後,以超音波震盪打斷染色體DNA。再加入1ml濃度為5M之NaCl於破菌液中,以離心力10865×g於4℃離心20分鐘後,保留含有原態的重組黑色素細胞瘤抗原蛋白的上清液,而沉澱物中含有變性的重組黑色素細胞瘤抗原蛋白,以10ml溶解緩衝溶液(50mM Tris-HCl,pH7.4、0.5M NaCl、10mM咪唑、6M尿素)將沉澱物回溶,以超音波震盪後再以離心力10865×g於4℃離心20分鐘後,保留含有變性的重組黑色素 細胞瘤抗原蛋白的上清液。含原態和變性的重組黑色素細胞瘤抗原蛋白之上清液分別以親和性管柱層析法純化。因重組黑色素細胞瘤抗原蛋白之C端具有6個組胺酸,純化方式為取適量上清液加入含10mM咪唑的鎳-螯合三乙酸基氨樹脂(Ni-chelating nitrilotriacetic acid;Ni-NTA)進行親和性管柱層析,於4℃均勻混合反應2小時後,加入清洗緩衝液(50mM Tris-HCl,pH7.4、0.5M NaCl、20mM咪唑)洗除非特異性結合之蛋白質。最後先以含有100mM咪唑的清洗緩衝液沖提2次,再以含有400mM咪唑的清洗緩衝液沖提2次,將結合於樹脂的重組黑色素細胞瘤抗原蛋白沖提下來。收集純化的重組黑色素細胞瘤抗原蛋白,並於透析緩衝液〔含4M尿素和0.1mM苯甲基磺醯化氟(PMSF)的PBS〕透析以移除多餘的鹽類。純化的重組黑色素細胞瘤抗原蛋白以蛋白質電泳分析確認。 The culture solution was centrifuged and the supernatant was discarded to collect the bacterial mass, and the bacterial mass was dissolved into the suspended cells by 10 ml of a binding buffer solution (50 mM Tris, 10 mM imidazole), and then the cells were lysed by a freeze-thaw method. The cell wall and 200 μl of lysozyme at a concentration of 20 mg/ml were added to help the cell wall of the cell. After the bacteria solution was placed at 37 ° C for 20 minutes, the chromosomal DNA was interrupted by ultrasonic vibration. Add 1ml of 5M NaCl to the bacterial solution, centrifuge at 10865×g for 10 minutes at 4°C, and then retain the supernatant containing the recombinant melanoblastoma antigen protein in the original state, and the precipitate contains denatured. The melanoblastoma antigen protein was recombined, and the precipitate was reconstituted with 10 ml of a lysis buffer solution (50 mM Tris-HCl, pH 7.4, 0.5 M NaCl, 10 mM imidazole, 6 M urea), which was shocked by ultrasonic waves and then centrifuged at 10,865 × g. Retention of recombinant melanin containing denaturation after centrifugation at 4 ° C for 20 minutes The supernatant of the cell tumor antigen protein. The supernatant of the recombinant melanoma antigenic protein containing the original state and the denaturing was purified by affinity column chromatography. Since the C-terminus of the recombinant melanoma antigen protein has 6 histidines, the purification method is to add an appropriate amount of the supernatant to a nickel-chelating nitrilotriacetic acid (Ni-NTA) containing 10 mM imidazole. Affinity column chromatography was carried out, and the reaction was uniformly mixed at 4 ° C for 2 hours, and then washed with a washing buffer (50 mM Tris-HCl, pH 7.4, 0.5 M NaCl, 20 mM imidazole), unless specifically bound. Finally, it was washed twice with a washing buffer containing 100 mM imidazole, and then twice with a washing buffer containing 400 mM imidazole, and the recombinant melanocytoma antigen protein bound to the resin was washed out. Purified recombinant melanoma antigenic protein was collected and dialyzed against dialysis buffer [PBS containing 4 M urea and 0.1 mM benzylsulfonated fluorochemical (PMSF)] to remove excess salts. The purified recombinant melanoma tumor antigen protein was confirmed by protein electrophoresis analysis.

請參照第3圖,為重組黑色素細胞瘤抗原蛋白各純化步驟之蛋白質表現分析圖,其中『M』為蛋白質之分子量標記。(A)部分為變性的重組黑色素細胞瘤抗原蛋白樣品,(B)部分為原態的重組黑色入細胞瘤抗原蛋白樣品。其中泳道1為未經IPTG誘導的粗破菌液,泳道2為經IPTG誘導的粗破菌液,泳道3為經超音波震盪後的破菌液,泳道4為破菌液與親和性管柱結合後的流入液,泳道5為第一次清洗的流出液,泳道6為使用含有100mM咪唑的清洗緩衝液 沖提的流出液,泳道7至8為含有400mM咪唑的清洗緩衝液沖提的流出液。結果顯示,重組黑色素細胞瘤抗原蛋白只以變性的形式表現,而原態的重組黑色素細胞瘤抗原表現雖然較少,但經由含有400mM咪唑的清洗緩衝液沖提後仍可獲得。 Please refer to Fig. 3, which is a protein expression analysis diagram of each purification step of the recombinant melanoma tumor antigen protein, wherein "M" is a molecular weight marker of the protein. (A) is a partially denatured recombinant melanoma antigenic protein sample, and (B) is a native recombinant black tumor cell antigen protein sample. Lane 1 is the crude bacterial suspension induced by IPTG, lane 2 is the crude bacterial suspension induced by IPTG, lane 3 is the bacterial suspension after ultrasonic shock, and lane 4 is the bacterial suspension and affinity column. After the combined influent, lane 5 is the effluent for the first wash, and lane 6 is the wash buffer containing 100 mM imidazole. The rinsed effluent, lanes 7 to 8 are effluent flushed with wash buffer containing 400 mM imidazole. The results showed that the recombinant melanoma tumor antigen protein was only expressed in a denatured form, whereas the original recombinant melanoma tumor antigen showed less performance, but was still obtained after elution through a washing buffer containing 400 mM imidazole.

二、抗體之製備Second, the preparation of antibodies 試驗例2-1:免疫流程Test Example 2-1: Immunization procedure

試驗採用乳劑型抗原肌肉注射法進行小鼠之免疫,試驗動物為三隻雌性BALA/c小鼠。將純化透析後的25μg重組黑色素細胞瘤抗原蛋白加入佛氏完全佐劑(Freund’s Adjuvant,Complete)製成乳劑,每2周肌肉注射1次,並於第11、25及39天收集小鼠血清,將血清保存至-20℃。 The mice were immunized with emulsion-type antigen intramuscular injection. The test animals were three female BALA/c mice. The purified dialysis 25 μg of recombinant melanoma tumor antigen protein was added to Freund's Adjuvant (Complete) to prepare an emulsion, which was intramuscularly injected every 2 weeks, and mouse serum was collected on days 11, 25 and 39. Serum was stored at -20 °C.

試驗例2-2:抗體之分析Test Example 2-2: Analysis of antibodies

為了測試所製備之抗體是否具有辨識重組黑色素細胞瘤抗原蛋白之能力,將收集之血清作為一級抗體以西方墨點法分析確認。第11天及第25天收集之小鼠血清稀釋倍數為1:20000,第39天收集之小鼠血清稀釋倍數為1:500000。 To test whether the prepared antibody has the ability to recognize recombinant melanoblastoma antigenic proteins, the collected serum was confirmed as a primary antibody by Western blot analysis. The serum dilutions of the mice collected on the 11th and 25th days were 1:20000, and the serum dilutions of the mice collected on the 39th day were 1:500000.

請參照第4圖,為抗體之西方墨點法轉漬圖,(A)至(C)部分為使用第11天收集之小鼠血清為一級抗體之組別,(D)至(F)部分為使用第25天收集之小鼠血清為一級 抗體之組別,(G)至(I)部分為使用第39天收集之小鼠血清為一級抗體之組別。泳道1為未經IPTG誘導之粗破菌液,泳道2為經IPTG誘導之粗破菌液。結果顯示,在第11、25及39天收集之小鼠血清皆具有辨識重組黑色素細胞瘤抗原蛋白的能力,且抗體效能非常好,在第11天及第25天收集之小鼠血清僅需1/20000就能辨識重組黑色素細胞瘤抗原蛋白,而在第39天收集之小鼠血清抗體效能更好,僅需1/500000即能辨識重組黑色素細胞瘤抗原蛋白。 Please refer to Figure 4 for the western blot of antibodies. Sections (A) to (C) are for the first-antibody group using the mouse serum collected on the 11th day, (D) to (F) The serum of the mice collected on the 25th day is the first grade. In the group of antibodies, the parts (G) to (I) are the group in which the serum of the mouse collected on the 39th day is the primary antibody. Lane 1 is a crude bacterial suspension that has not been induced by IPTG, and Lane 2 is a crude bacterial suspension induced by IPTG. The results showed that the mouse sera collected on the 11th, 25th and 39th days had the ability to recognize the recombinant melanocytoma antigen protein, and the antibody potency was very good. The serum of the mice collected on the 11th and 25th days only needed 1 Recombinant melanoma antigen protein can be identified by /20000, and the serum antibody collected on day 39 is more potent, and only 1/500,000 can identify the recombinant melanoma antigen protein.

再以酵素連結免液吸附法(ELISA)分析第25天收集之小鼠血清之抗體力價。將不同濃度之重組黑色素細胞瘤抗原蛋白作為抗原塗覆在檢測盤的表面,抗原以2倍序列稀釋,濃度分別為0.97、1.95、3.91、7.81、15.63、31.25、62.5、125、250、500及1000ng/well。以第25天收集之小鼠血清作為一級抗體,以2倍序列稀釋,稀釋倍數分別為1:500、1:1000、1:2000、1:4000、1:8000及1:16000,在室溫下反應1小時後,以清洗緩衝溶液(含0.05% Tween 20的PBS)清洗3次,再加入鍵結酵素之抗體(HRP-conjugated抗體)於室溫下反應1小時後,以清洗緩衝溶液清洗3次,加入TMB呈色劑(Clinical Science Laboratory,Inc)10至15分鐘後,加入終止液(2N H2SO4)以酵素免疫分析測讀儀判讀OD450吸光值。請參照第5圖,為本發明抗體之酵素連結免液吸附法分析圖。結果顯示,在 最大稀釋倍數(1:16000)下仍具備偵測1ng重組黑色素細胞瘤抗原蛋白的能力(OD450為0.48),再次證明本發明之抗體具有高抗體力價。 The antibody titer of the mouse serum collected on the 25th day was analyzed by enzyme-linked immunosorbent assay (ELISA). Different concentrations of recombinant melanocytoma antigen protein were coated on the surface of the test disc as antigen, and the antigen was diluted by 2 times, and the concentrations were 0.97, 1.95, 3.91, 7.81, 15.63, 31.25, 62.5, 125, 250, 500 and 1000ng/well. The mouse serum collected on the 25th day was used as a primary antibody and diluted in a 2-fold sequence at dilution ratios of 1:500, 1:1000, 1:2000, 1:4000, 1:8000, and 1:16000, at room temperature. After the reaction for 1 hour, it was washed 3 times with a washing buffer solution (PBS containing 0.05% Tween 20), and then an antibody (HRP-conjugated antibody) containing a binding enzyme was added at room temperature for 1 hour, and then washed with a washing buffer solution. Three times, 10 to 15 minutes after the addition of TMB coloring agent (Clinical Science Laboratory, Inc), a stop solution (2N H 2 SO 4 ) was added to determine the absorbance of OD 450 by an enzyme immunoassay tester. Please refer to Fig. 5 for the analysis of the enzyme-free liquid-adsorption adsorption method of the antibody of the present invention. The results show that the maximum dilution: lower (116,000) still have the ability to 1ng recombinant protein in the cell melanoma antigen (OD 450 of 0.48) detect, once again proved that antibodies of the invention having a high antibody titer.

三、檢測方法Third, the detection method

本發明實施例用於活體外檢測哺乳類動物之腫瘤之方法,係使用上述之第一引子對及/或第二引子對,以RT-PCR或nested PCR檢測檢體是否含有黑色素細胞瘤抗原核酸。或使用上述之抗體,以免疫組織化學染色法、酵素連結免液吸附法或西方墨點法檢測檢體是否含有黑色素細胞瘤抗原蛋白質。當檢測到黑色素細胞瘤抗原核酸或蛋白質的表現為有腫瘤存在之表徵。 In the present invention, a method for detecting a tumor of a mammal in vitro is carried out by using the first primer pair and/or the second primer pair described above, and detecting whether the sample contains melanoma antigen nucleic acid by RT-PCR or nested PCR. Or using the above antibody, the immunohistochemical staining method, the enzyme-linked liquid-free adsorption method or the Western blot method to detect whether the sample contains melanoma antigen protein. When a melanoma antigenic nucleic acid or protein is detected, it is characterized by the presence of a tumor.

試驗例3-1:聚合酶連鎖反應Test Example 3-1: Polymerase chain reaction

本試驗例係包含利用RT-PCR或nested PCR檢測哺乳類動物之樣本是否具有黑色素細胞瘤抗原之核酸,以作為具有哺乳類動物腫瘤之依據。檢測的樣本包含犬的10個正常睪丸、4個纖維組織肉瘤、5個脂肪肉瘤、3個惡性周邊神經鞘瘤、3個傳染性花柳性腫瘤、2個血管肉瘤、5個惡性黑色素瘤、4個淋巴瘤、1個組織細胞肉瘤、5個肥大細胞瘤、2個黏液肉瘤、4個骨肉瘤、3個漿細胞瘤和3個惡性鱗狀上皮細胞瘤。分別利用商品化套組或習知萃取方法萃取上述組織之總RNA,利用第一引子對或第二引子對進行逆轉錄聚合酶連鎖反應,逆轉錄反應之反應物及試劑依下述 比例進行:4μg RNA、2μl濃度為5μM之任意引子、4μl濃度為2.5mM之dNTP混合液、4μl之5X第一標準緩衝液、1μl濃度為0.1M之DTT、1μl之RNase抑制劑及1μl之逆轉錄酶,最後加入滅菌之去離子水,調整最終體積為15μl。將溶液混合均勻後於50℃下反應60分鐘,再於70℃去活性15分鐘,反應所得之cDNA保存於-20℃冰箱中,以備用於後續之聚合酶連鎖反應。聚合酶連鎖反應係以第一引子對或第二引子對為反應之引子,步驟同試驗例1-1中所示,在此不再贅述。利用瓊脂膠體電泳偵測RT-PCR產物是否有具有一相同或互補如序列辨識編號1所示之核酸之部分核苷酸序列。 This test example includes the use of RT-PCR or nested PCR to detect whether a sample of a mammal has a nucleic acid having a melanoma antigen as a basis for having a mammalian tumor. The samples tested included 10 normal testiculars of dogs, 4 fibrous tissue sarcomas, 5 liposarcoma, 3 malignant peripheral schwannomas, 3 infectious sacral tumors, 2 angiosarcomas, 5 malignant melanomas, 4 Lymphoma, 1 histiocytic sarcoma, 5 mast cell tumors, 2 mucinous sarcomas, 4 osteosarcoma, 3 plasmacytomas, and 3 malignant squamous cell tumors. The total RNA of the above tissues is extracted by a commercial kit or a conventional extraction method, and the first primer pair or the second primer pair is subjected to a reverse transcription polymerase chain reaction, and the reactants and reagents of the reverse transcription reaction are as follows. Proportion: 4 μg RNA, 2 μl of any primer with a concentration of 5 μM, 4 μl of a dNTP mixture with a concentration of 2.5 mM, 4 μl of 5X first standard buffer, 1 μl of DTT at a concentration of 0.1 M, 1 μl of RNase inhibitor and 1 μl of inverse The transcriptase was finally added to sterile deionized water and the final volume was adjusted to 15 μl. The solution was uniformly mixed, reacted at 50 ° C for 60 minutes, and then deactivated at 70 ° C for 15 minutes. The cDNA obtained by the reaction was stored in a refrigerator at -20 ° C for use in the subsequent polymerase chain reaction. The polymerase chain reaction is a primer with a first primer pair or a second primer pair, and the steps are the same as those shown in Test Example 1-1, and will not be described herein. The agarose gel electrophoresis is used to detect whether the RT-PCR product has a partial nucleotide sequence having the same or complementary nucleic acid as shown in SEQ ID NO: 1.

而本試驗例利用nested PCR檢測黑色素細胞瘤抗原之核酸的反應步驟如下:以前述萃取各組織之總RNA為模板,先使用第一引子對與總RNA進行RT-PCR,以獲得RT-PCR產物。再使用第二引子對與RT-PCR產物進行nested PCR,以獲得nested PCR產物,最後利用瓊脂膠體電泳偵測nested PCR產物是否有具有一相同或互補如序列辨識編號1所示之核酸之部分核苷酸序列。 The reaction procedure of detecting the nucleic acid of melanoma antigen by using nested PCR is as follows: using the above-mentioned total RNA extracted from each tissue as a template, RT-PCR is performed on the total RNA with the first primer pair to obtain an RT-PCR product. . The second primer pair is used for nested PCR with the RT-PCR product to obtain the nested PCR product. Finally, the agarose gel electrophoresis is used to detect whether the nested PCR product has a partial or complementary nucleic acid having the same or complementary nucleic acid sequence number 1. Glycosidic acid sequence.

請參照表一,為利用聚合酶連鎖反應檢測黑色素細胞瘤抗原核酸之表現率。結果顯示,本發明之檢測方法於睪丸和13種不同種類之腫瘤檢測結果皆為陽性,其中於睪丸、惡性黑色素瘤、血管肉瘤、惡性周邊神經鞘瘤、傳染 性花柳性腫瘤、纖維組織肉瘤、組織細胞肉瘤、黏液肉瘤及骨肉瘤的檢測率達100%,於脂肪肉瘤和肥大細胞瘤檢測率達80%,於淋巴瘤可達75%,而於漿細胞瘤和惡性鱗狀上皮細胞瘤也可達66.66%。 Please refer to Table 1 for the detection of the expression rate of melanoma antigen nucleic acid by polymerase chain reaction. The results showed that the detection method of the present invention was positive in the test results of the testicles and 13 different types of tumors, among which the sputum pills, malignant melanoma, angiosarcoma, malignant peripheral schwannomas, infection The detection rate of squamous cell tumor, fibrosarcoma sarcoma, histiocytic sarcoma, mucinous sarcoma and osteosarcoma is 100%, the rate of detection of liposarcoma and mast cell tumor is 80%, and that of lymphoma can reach 75%. Tumor and malignant squamous cell tumors can reach 66.66%.

試驗例3-2:免疫組織化學染色法Test Example 3-2: Immunohistochemical staining

免疫組織化學染色法係將不同的正常組織及不同種類之腫瘤組織以石蠟包埋組織,並將切片機切成5mm之厚度玻片,再經脫臘、回水、復性等,將玻片夾出放入本發明之抗體作為一級抗體於室溫下反應10至60分鐘,一級抗體的稀釋倍數為1:2000。以PBS沖洗三次。再以二級抗 體於室溫下反應20分鐘,PBS沖洗三次,且以3',3'-diaminobenzendine(DAB)以1:100比例染色10分鐘,再以蘇木精(haematoxylin)染細胞核1分鐘後封片。 Immunohistochemical staining method is to embed different normal tissues and different types of tumor tissues in paraffin, and cut the slicer into 5mm thickness slides, then remove the wax, return water, renaturation, etc. The antibody of the present invention was inserted as a primary antibody and reacted at room temperature for 10 to 60 minutes, and the dilution ratio of the primary antibody was 1:2000. Rinse three times with PBS. Secondary resistance The cells were reacted at room temperature for 20 minutes, washed three times with PBS, and stained with 3', 3'-diaminobenzendine (DAB) at a ratio of 1:100 for 10 minutes, and then stained with hematoxylin for 1 minute and then mounted.

請參照表二,為以免疫組織化學染色法檢測黑色素細胞瘤抗原於正常組織之蛋白質表現,結果顯示,於正常組織中僅於睪丸可以檢測到黑色素細胞瘤抗原的蛋白質表現,而於其他正常組織中皆未檢測到黑色素細胞瘤抗原的蛋白質表現。 Please refer to Table 2 for the detection of protein expression of melanocytoma antigen in normal tissues by immunohistochemical staining. The results show that in normal tissues, only the testis can detect the protein expression of melanoma antigen, while in other normal tissues. No protein expression of melanoma antigens was detected in the medium.

請參照表三,為以免疫組織化學染色法檢測黑色素細胞瘤抗原於腫瘤組織之蛋白質表現。結果顯示,本發明之檢測方法於13種不同種類之腫瘤檢測結果皆為陽性,其中於血管肉瘤、惡性周邊神經鞘瘤、傳染性花柳性腫瘤及骨肉瘤的檢測率可達80%以上,於惡性黑色素瘤、惡性鱗狀上皮細胞、纖維組織肉瘤、漿細胞瘤、肥大細胞瘤、淋巴瘤、組織細胞肉瘤以及黏液肉瘤檢測率可達60%以上,而於脂肪肉瘤檢測率也可達40%。 Please refer to Table 3 for the detection of protein expression of melanoma antigens in tumor tissues by immunohistochemical staining. The results showed that the detection method of the present invention was positive in 13 different types of tumor detection, and the detection rate of angiosarcoma, malignant peripheral schwannomas, infectious sacral tumor and osteosarcoma was over 80%. The detection rate of malignant melanoma, malignant squamous cell, fibroblastic sarcoma, plasmacytoma, mast cell tumor, lymphoma, histiocytic sarcoma and mucinous sarcoma can reach more than 60%, and the detection rate of liposarcoma can reach 40%. .

根據上述,本發明之黑色素細胞瘤抗原於正常組織只表現於睪丸及胎盤,但表現於多種不同的腫瘤中,為一種理想的腫瘤標記,且本發明之黑色素細胞瘤抗原為12種MAGE-A(MAGE-A1至MAGE-A12)彼此之間變異度最小之區域,且由上述試驗例中再再證明,藉由偵測本發明之黑色素細胞瘤抗原核酸或蛋白質的存在與否,可同時檢測多種腫瘤,以準確、快速且全面地檢測哺乳類動物個體是否存在腫瘤,具有應用於醫學上之潛力。而本發明之重組黑色素細胞瘤抗原蛋白,其為本發明之黑色素細胞瘤抗原二重複之融合蛋白,以此重組黑色素細胞瘤抗原蛋白作為生產抗體之抗原,可增加抗原之辨識度,故可生產出具有高抗體力價且專一性高之抗體。 According to the above, the melanoma tumor antigen of the present invention is expressed only in the testicular and placenta in normal tissues, but is expressed in a variety of different tumors, and is an ideal tumor marker, and the melanoblastoma antigen of the present invention is 12 kinds of MAGE-A. (MAGE-A1 to MAGE-A12) The region with the least variability between each other, and further proved by the above test examples, by detecting the presence or absence of the melanoblastoma antigen nucleic acid or protein of the present invention, simultaneous detection A variety of tumors have the potential to be applied in medicine for accurate, rapid and comprehensive detection of the presence or absence of tumors in mammalian individuals. The recombinant melanoma tumor antigen protein of the present invention is the fusion protein of the melanocytoma antigen of the present invention, and the recombinant melanoma tumor antigen protein is used as an antigen for producing the antibody, thereby increasing the recognition degree of the antigen, so that the protein can be produced. An antibody with high antibody valence and high specificity.

因聚合酶連鎖反應本身之特性,引子與欲增幅之模板間之序列即便存在變異性,仍可藉調節聚合酶連鎖反應中黏合步驟之反應溫度而合成特定之核酸片段,故於本發明所屬技術領域中具有通常知識者根據本發明之揭示,即可根據欲增幅之核酸片段設計不同之引子。因此,任何針對本發明實施例所述之個別引子所為之鹼基置換、加入或縮減所形成的引子,如其仍可與本發明實施例所述之相對應引子組 成引子對而增幅出包含序列辨識編號1所示之片段,皆不脫離本發明所欲保護之範圍。 Due to the nature of the polymerase chain reaction itself, even if there is variability in the sequence between the primer and the template to be amplified, the specific nucleic acid fragment can be synthesized by adjusting the reaction temperature of the bonding step in the polymerase chain reaction, so the technique of the present invention According to the disclosure of the present invention, it is possible to design different primers according to the nucleic acid fragment to be amplified. Therefore, any primers formed by base substitution, addition or reduction for the individual primers described in the embodiments of the present invention may still be associated with the primers described in the embodiments of the present invention. The fragment shown in the sequence identification number 1 is added to the primer pair without departing from the scope of the present invention.

除上述之外,於本發明所屬技術領域中具有通常知識者根據本發明之揭示,使用任一種形式以評估分析本發明黑色素細胞瘤抗原之核酸或蛋白質,皆不脫離本發明所欲保護之範圍。例如核酸或蛋白質可使用本發明所屬技術領域所知之技術,從一諸如新鮮或是冷凍之生物檢體、被福馬林固定之組織以及血液、血漿、血清、尿液或唾液之體液等試驗樣本被分離與分析。分析特定核酸之方法,除了本發明之實施例所述之RT-PCR和nested PCR,包含PCR、在原位雜交、北方墨點法、高密度表現陣列、微陣列等亦為可被預期之技術。而在分析特定蛋白質之方法,除了本發明實施例所述之西方墨點法和免疫組織化學染色法,包含酵素連結免液吸附法和酵素分析亦為可被預期之技術。 In addition to the above, those having ordinary knowledge in the art to which the present invention pertains, according to the disclosure of the present invention, use any form to evaluate the analysis of the nucleic acid or protein of the melanoma antigen of the present invention without departing from the scope of the present invention. . For example, nucleic acids or proteins can be tested from a biological sample such as fresh or frozen, tissue fixed by formalin, and body fluids of blood, plasma, serum, urine or saliva using techniques known in the art to which the present invention pertains. Is separated and analyzed. Methods for analyzing specific nucleic acids, in addition to RT-PCR and nested PCR as described in the examples of the present invention, including PCR, in situ hybridization, northern blotting, high density performance arrays, microarrays, etc. are also contemplated techniques . In the method of analyzing a specific protein, in addition to the Western blotting method and the immunohistochemical staining method described in the examples of the present invention, the enzyme-containing fluid-free adsorption method and the enzyme assay are also expected techniques.

本發明已以實施方式揭露如上,然其並非用以限定本發明,任何熟習此技藝者,在不脫離本發明的精神和範圍內,當可作各種的更動與潤飾,因此本發明的保護範圍當視後附的申請專利範圍所界定者為準。 The present invention has been disclosed in the above embodiments, but it is not intended to limit the invention, and the scope of the present invention can be varied and modified without departing from the spirit and scope of the invention. It is subject to the definition of the scope of the patent application attached.

<110> 國立中興大學 <110> National Chung Hsing University

<120> 腫瘤特異性抗原、其重組蛋白、抗體及引子對以及檢測哺乳類動物腫瘤之方法 <120> Tumor-specific antigen, recombinant protein, antibody and primer pair thereof, and method for detecting mammalian tumor

<160> 9 <160> 9

<210> 1 <210> 1

<211> 240 <211> 240

<212> DNA <212> DNA

<213> Canis lupus <213> Canis lupus

<220> CDS <220> CDS

<223> 黑色素細胞瘤抗原之基因序列 <223> Gene sequence of melanoma antigen

<400> 1 <400> 1

<210> 2 <210> 2

<211> 80 <211> 80

<212> PRT <212> PRT

<213> Canis lupus <213> Canis lupus

<223> 黑色素細胞瘤抗原之胺基酸序列 <223> Amino acid sequence of melanoma antigen

<400> 2 <400> 2

<210> 3 <210> 3

<211> 26 <211> 26

<212> DNA <212> DNA

<213> Artificial Sequence <213> Artificial Sequence

<220> primer <220> primer

<223> 進行PCR增幅黑色素細胞瘤抗原保留區片段的引子(forward) <223> A primer for PCR amplification of melanoma antigen-preserving region fragments

<400> 3 <400> 3

<210> 4 <210> 4

<211> 23 <211> 23

<212> DNA <212> DNA

<213> Artificial Sequence <213> Artificial Sequence

<220> primer <220> primer

<223> 進行PCR增幅黑色素細胞瘤抗原保留區片段的引子(reversed) <223> Introduction of PCR-amplified melanoma tumor antigen retention region fragments (reversed)

<400> 4 <400> 4

<210> 5 <210> 5

<211> 30 <211> 30

<212> DNA <212> DNA

<213> Artificial Sequence <213> Artificial Sequence

<220> primer <220> primer

<223> 進行PCR增幅序列辨識編號1片段的引子(forward) <223> Performing PCR amplification sequence identification number 1 segment of the forward (forward)

<400> 5 <400> 5

<210> 6 <210> 6

<211> 28 <211> 28

<212> DNA <212> DNA

<213> Artificial Sequence <213> Artificial Sequence

<220> primer <220> primer

<223> 進行PCR增幅序列辨識編號1片段的引子(reversed) <223> Performing PCR amplification sequence identification number 1 fragment of the reversed

<400> 6 <400> 6

<210> 7 <210> 7

<211> 30 <211> 30

<212> DNA <212> DNA

<213> Artificial Sequence <213> Artificial Sequence

<220> primer <220> primer

<223> 進行PCR增幅序列辨識編號1片段的引子(forward) <223> Performing PCR amplification sequence identification number 1 segment of the forward (forward)

<400> 7 <400> 7

<210> 8 <210> 8

<211> 483 <211> 483

<212> DNA <212> DNA

<213> Canis lupus <213> Canis lupus

<220> CDS <220> CDS

<223> 重組黑色素細胞瘤抗原之基因序列 <223> Gene sequence of recombinant melanoma antigen

<400> 8 <400> 8

<210> 9 <210> 9

<211> 161 <211> 161

<212> PRT <212> PRT

<213> Canis lupus <213> Canis lupus

<223> 重組黑色素細胞瘤抗原之胺基酸序列 <223> Amino acid sequence of recombinant melanoma antigen

<400> 9 <400> 9

Claims (17)

一種單離的黑色素細胞瘤抗原蛋白質,其序列如序列辨識編號2所示。 An isolated melanoma antigen protein having a sequence as shown in SEQ ID NO: 2. 一種單離的核酸,其序列如序列辨識編號1所示,係編碼如請求項1所述之黑色素細胞瘤抗原蛋白質。 An isolated nucleic acid having the sequence shown in SEQ ID NO: 1, encoding the melanoma antigen protein of claim 1. 一種表現載體,其包含如請求項2所述之核酸。 A performance vector comprising the nucleic acid of claim 2. 一種宿主細胞,其轉形如請求項3所述之表現載體。 A host cell transformed into the expression vector of claim 3. 如請求項4所述之宿主細胞,其為大腸桿菌。 The host cell of claim 4, which is Escherichia coli. 一種重組黑色素細胞瘤抗原蛋白之製造方法,其包含培養如請求項4或5之宿主細胞,以獲得重組黑色素細胞瘤抗原蛋白。 A method for producing a recombinant melanoma tumor antigen protein comprising culturing a host cell as claimed in claim 4 or 5 to obtain a recombinant melanoma tumor antigen protein. 一種重組黑色素細胞瘤抗原蛋白,其胺基酸序列如序列辨識編號9所示,係以如請求項6之製造方法製備。 A recombinant melanoma antigenic protein having an amino acid sequence as shown in SEQ ID NO: 9, prepared by the method of claim 6. 一種單離的抗體,其對如請求項7所述之重 組黑色素細胞瘤抗原蛋白具有結合親和力。 An isolated antibody that is as heavy as described in claim 7 The group of melanoma antigenic proteins has binding affinity. 一種用於檢測哺乳類動物之腫瘤之引子對,係由根據序列辨識編號1所示之核酸而設計之一順向引子及一反向引子所組成,其中該順向引子之序列如序列辨識編號5所示,該反向引子之序列如序列辨識編號6所示。 A primer pair for detecting a tumor of a mammal is composed of a forward primer and a reverse primer designed according to the nucleic acid shown in Sequence Identification No. 1, wherein the sequence of the forward primer is, for example, sequence identification number 5 As shown, the sequence of the reverse primer is shown as sequence identification number 6. 一種用於活體外檢測犬(Canis lupus)之腫瘤之方法,包含:提供一生物性樣品;以及進行一檢測方法,以檢測該生物性樣品是否含有一黑色素細胞瘤抗原核酸或一黑色素細胞瘤抗原蛋白質,其中該黑色素細胞瘤抗原核酸具有如序列辨識編碼1所示之序列,該黑色素細胞瘤抗原蛋白質具有如序列辨識編號2所示之序列。 A method for detecting a tumor of a canine ( Canis lupus ) in vitro comprises: providing a biological sample; and performing a detection method to detect whether the biological sample contains a melanoma antigen nucleic acid or a melanoma antigen A protein, wherein the melanoblastoma antigen nucleic acid has a sequence as shown in SEQ ID NO: 1, the melanoblastoma antigen protein having a sequence as shown in SEQ ID NO: 2. 如請求項10所述之用於活體外檢測犬腫瘤之方法,其中該生物性樣品係選自由腫瘤組織、腫瘤周邊組織、體液及滲出液所組成之群組。 The method for detecting a canine tumor in vitro as described in claim 10, wherein the biological sample is selected from the group consisting of tumor tissue, tumor surrounding tissue, body fluid, and exudate. 如請求項10所述之用於活體外檢測犬腫瘤之方法,其中該檢測方法係為逆轉錄聚合酶連鎖反應(RT-PCR)。 A method for detecting a canine tumor in vitro as described in claim 10, wherein the detection method is a reverse transcription polymerase chain reaction (RT-PCR). 如請求項10所述之用於活體外檢測犬腫瘤之方法,其中該檢測方法係為巢式聚合酶連鎖反應(nested PCR)。 A method for detecting a canine tumor in vitro as described in claim 10, wherein the detection method is nested polymerase chain reaction (nested PCR). 如請求項13所述之用於活體外檢測犬腫瘤之方法,其更包含下列步驟:自該生物性樣品萃取出一總RNA;使用一第一引子對與該總RNA進行RT-PCR,以獲得一RT-PCR產物,其中該第一引子對由具有序列辨識編號3所示之序列的引子與具有序列辨識編號4所示之序列的引子組成;使用一第二引子對與該RT-PCR產物進行nested PCR,以獲得一nested PCR產物,其中該第二引子對由具有序列辨識編號5所示之序列的引子與具有序列辨識編號6所示之序列的引子組成;以及利用瓊脂膠體電泳偵測該nested PCR產物是否有具有一相同或互補如序列辨識編號1所示之DNA之部分核苷酸序列。 The method for detecting a canine tumor in vitro according to claim 13, further comprising the steps of: extracting a total RNA from the biological sample; performing RT-PCR on the total RNA using a first primer pair, Obtaining an RT-PCR product, wherein the first primer pair consists of a primer having the sequence shown in SEQ ID NO: 3 and a primer having the sequence shown in SEQ ID NO: 4; using a second primer pair and the RT-PCR The product is subjected to nested PCR to obtain a nested PCR product, wherein the second primer pair consists of a primer having the sequence shown in SEQ ID NO: 5 and a primer having the sequence indicated by SEQ ID NO: 6; and using agar gel electrophoresis The nested PCR product is tested for a partial nucleotide sequence having the same or complementary DNA as shown in SEQ ID NO: 1. 如請求項10所述之用於活體外檢測犬腫瘤之方法,其中該檢測方法係為免疫組織化學染色法。 A method for detecting a canine tumor in vitro as described in claim 10, wherein the detection method is immunohistochemical staining. 如請求項10所述之用於活體外檢測犬腫瘤之方法,其中該檢測方法係為西方墨點法。 A method for detecting a canine tumor in vitro as described in claim 10, wherein the detection method is a Western blot method. 如請求項10所述之用於活體外檢測犬腫瘤之方法,其中該檢測方法係為酵素連結免疫吸附法(ELISA)。 The method for detecting a canine tumor in vitro as described in claim 10, wherein the detection method is an enzyme-linked immunosorbent assay (ELISA).
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陳音竹(指導教授:張仕杰),Melanoma antigen-A在犬正常及間質來源腫瘤組織的表現,中興大學碩士論文,2013/12/29 *

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