TW202342508A - POLYPEPTIDES COMPRISING IMMUNOGLOBULIN SINGLE VARIABLE DOMAINS TARGETING TCRαβ, CD33 and CD123 - Google Patents
POLYPEPTIDES COMPRISING IMMUNOGLOBULIN SINGLE VARIABLE DOMAINS TARGETING TCRαβ, CD33 and CD123 Download PDFInfo
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Abstract
Description
本發明技術涉及靶向TCRαβ、CD33和CD123的多肽。其還涉及編碼這些多肽的核酸分子以及包含這些核酸的載體。本發明技術進一步涉及包含此類多肽、核酸或載體的組成物。本發明技術還涉及用於治療患有急性骨髓性白血病(AML)的受試者的方法中的此類組成物。此外,本發明技術涉及產生這些組成物的方法。The present technology relates to polypeptides targeting TCRαβ, CD33 and CD123. It also relates to nucleic acid molecules encoding these polypeptides and vectors containing these nucleic acids. The present technology further relates to compositions comprising such polypeptides, nucleic acids or vectors. The present technology also relates to such compositions for use in methods of treating subjects suffering from acute myelogenous leukemia (AML). Additionally, the present technology relates to methods of producing these compositions.
直到今天,急性骨髓性白血病(AML)的治療仍然具有挑戰性。由於在所有免疫細胞中,細胞毒性T細胞顯現具有最高的治療惡性疾病的潛力,因此AML治療方法旨在將細胞毒性T細胞引導至AML細胞。發現CD33和CD123抗原在大多數AML病例的胚細胞和白血病幹細胞上過度表現,因此被用作基於抗體的療法的合適的腫瘤相關靶抗原。麥羅塔(Mylotarg)(奧-吉妥珠單抗;一種抗CD33抗體藥物接合物)是首個註冊用於治療AML的靶向化合物。最近的療法基於靶向AML細胞上的腫瘤抗原CD33或CD123以及細胞毒性T細胞上的CD3的雙重特異性抗體構築體。To this day, treatment of acute myelogenous leukemia (AML) remains challenging. Because of all immune cells, cytotoxic T cells appear to have the highest potential to treat malignant disease, AML therapeutic approaches aim to direct cytotoxic T cells to AML cells. The CD33 and CD123 antigens were found to be overrepresented on blasts and leukemic stem cells in most AML cases and were therefore used as suitable tumor-associated target antigens for antibody-based therapies. Mylotarg (ogemtuzumab; an anti-CD33 antibody drug conjugate) is the first targeted compound registered for the treatment of AML. Recent therapies are based on dual-specific antibody constructs targeting the tumor antigens CD33 or CD123 on AML cells and CD3 on cytotoxic T cells.
因此,雙重特異性抗體可以錨定在CD33+或CD123+ AML細胞上,並且同時可以與T細胞上的CD3結合。以此方式,使T細胞與腫瘤細胞緊密接近。雙重特異性抗體與腫瘤細胞上的腫瘤抗原(CD33或CD123)以及同時與T細胞上的TCR相關CD3分子的多重結合導致TCR簇集。這最終導致與TCR特異性無關的有效T細胞活化。然後AML細胞附近的細胞毒性T細胞啟動可導致腫瘤細胞殺傷。目前在臨床試驗中測試的雙重特異性抗體構築體是例如伏妥珠單抗(Flotetuzumab)(MGD006;CD3/CD123 DART)、AMG330或AMG673(兩者均為CD3/CD33 BiTE)。Therefore, bispecific antibodies can be anchored on CD33+ or CD123+ AML cells and simultaneously bind to CD3 on T cells. In this way, T cells are brought into close proximity with tumor cells. Multiple binding of bispecific antibodies to tumor antigens (CD33 or CD123) on tumor cells and simultaneously to TCR-associated CD3 molecules on T cells results in TCR clustering. This ultimately leads to efficient T cell activation independent of TCR specificity. Cytotoxic T cells near the AML cells are then primed, leading to tumor cell killing. Dual-specific antibody constructs currently being tested in clinical trials are, for example, Flotetuzumab (MGD006; CD3/CD123 DART), AMG330 or AMG673 (both CD3/CD33 BiTEs).
鑒於CD33和CD123表現的異質性(這在AML患者群體(患者間)以及單個患者的AML胚細胞群體(患者內)兩者中均發現),AML的有效治療很複雜。此外,由於治療性干預誘導的選擇壓力,靶向單個腫瘤抗原具有在腫瘤細胞上失去此抗原表現的風險(Gardner等人, Blood, 127(20), 2406-2410 (2016);Blood. 2017年1月5日;129(1):100-104)。因此,強烈需要克服單一靶向療法的局限性並且具有更廣泛患者覆蓋範圍的新治療方法。Effective treatment of AML is complex given the heterogeneity of CD33 and CD123 expression that is found both in AML patient populations (inter-patient) and in individual patient AML blast populations (intra-patient). Furthermore, targeting a single tumor antigen carries the risk of losing the representation of this antigen on tumor cells due to selection pressure induced by therapeutic intervention (Gardner et al., Blood, 127(20), 2406-2410 (2016); Blood. 2017 Jan 5;129(1):100-104). Therefore, there is a strong need for new therapeutic approaches that overcome the limitations of single targeted therapies and have broader patient coverage.
本發明的諸位發明人發現雙重靶向急性骨髓性白血病(AML)細胞上的CD33和CD123與靶向T細胞上的T細胞受體αβ(TCR αβ)組合的多肽(或ISVD構築體)導致AML細胞的有效殺傷。對CD33/CD123雙表現細胞的殺傷活性與單一靶向基準(如CD33/CD3 AMG 330 BiTE或CD123/CD3 MGD006 DART)是相當的。然而,本發明的多肽顯示出對CD33和CD123單表現細胞的強大殺傷活性,而單一靶向基準僅顯示出針對表現其特異性標靶的細胞的活性。此外,與基準相比,本發明的多肽誘導相似或甚至更低水平的發炎性細胞激素。The inventors of the present invention discovered that a polypeptide (or ISVD construct) that dually targets CD33 and CD123 on acute myeloid leukemia (AML) cells in combination with targeting T cell receptor αβ (TCR αβ) on T cells leads to AML Effective killing of cells. Killing activity against CD33/CD123 dual-expressing cells is comparable to single-target benchmarks such as CD33/CD3 AMG 330 BiTE or CD123/CD3 MGD006 DART. However, the polypeptides of the invention showed potent killing activity against CD33 and CD123 single-expressing cells, whereas the single-targeting benchmark only showed activity against cells expressing their specific targets. Furthermore, the polypeptides of the invention induce similar or even lower levels of inflammatory cytokines compared to baseline.
在一些實施例中,本發明技術的多肽被高效產生(例如在微生物宿主中),並且在高濃度下顯示低黏度,這對於皮下投予是有利且方便的。此外,此類多肽對待治療受試者中預先存在的抗體(即在第一次用所述抗體構築體治療之前存在於受試者中的抗體)具有有限的反應性。在優選實施例中,此類多肽在待治療的受試者中展現出足夠長的半衰期,使得可以方便地將連續的治療間隔開。In some embodiments, polypeptides of the present technology are efficiently produced (eg, in microbial hosts) and exhibit low viscosity at high concentrations, which is advantageous and convenient for subcutaneous administration. Furthermore, such polypeptides have limited reactivity with pre-existing antibodies in the subject to be treated (i.e., antibodies present in the subject prior to first treatment with the antibody construct). In preferred embodiments, such polypeptides exhibit a sufficiently long half-life in the subject to be treated such that successive treatments can be conveniently spaced apart.
本發明技術的多肽包含至少三個免疫球蛋白單可變結構域(ISVD)或由其組成,其中至少一個ISVD與TCRαβ特異性地結合,至少一個ISVD與CD33特異性地結合並且至少一個ISVD與CD123特異性地結合(示例性多肽展示於 圖 1中)。優選地,與TCRαβ結合的所述至少一個ISVD與人TCRαβ特異性地結合,與CD33結合的所述至少一個ISVD與人CD33特異性地結合並且與CD123結合的所述至少一個ISVD與人CD123特異性地結合。 Polypeptides of the present technology comprise or consist of at least three immunoglobulin single variable domains (ISVDs), wherein at least one ISVD specifically binds to TCRαβ, at least one ISVD specifically binds to CD33 and at least one ISVD CD123 binds specifically (exemplary polypeptides are shown in Figure 1 ). Preferably, said at least one ISVD binding to TCRαβ specifically binds to human TCRαβ, said at least one ISVD binding to CD33 specifically binds to human CD33 and said at least one ISVD binding to CD123 is specific to human CD123 Sexually combined.
所述多肽優選地還包含任選地經由一個或多個肽連接子連接的一個或多個其他基團、殘基、部分或結合單元,其中與沒有所述一個或多個其他基團、殘基、部分或結合單元的相應多肽相比,所述一個或多個其他基團、殘基、部分或結合單元使所述多肽的半衰期增加。例如,結合單元可以是與血清蛋白結合、優選地與人血清蛋白如人血清白蛋白結合的ISVD。The polypeptide preferably further comprises one or more other groups, residues, moieties or binding units, optionally linked via one or more peptide linkers, which are identical to the absence of said one or more other groups, residues or binding units. The one or more other groups, residues, moieties or binding units increases the half-life of the polypeptide as compared to the corresponding polypeptide. For example, the binding unit may be an ISVD that binds to a serum protein, preferably to a human serum protein such as human serum albumin.
還提供了一種能夠表現本發明技術的多肽的核酸分子、包含所述核酸的核酸或載體以及包含所述多肽、所述核酸或所述載體的組成物。所述組成物優選地是醫藥組成物。Also provided are a nucleic acid molecule capable of expressing the polypeptide of the present technology, a nucleic acid or vector comprising the nucleic acid, and a composition comprising the polypeptide, the nucleic acid or the vector. The composition is preferably a pharmaceutical composition.
還提供了一種包含編碼根據本發明技術的多肽的核酸或載體的宿主或宿主細胞。Also provided is a host or host cell comprising a nucleic acid or vector encoding a polypeptide according to the present technology.
還提供了一種產生根據本發明技術的多肽的方法,所述方法至少包括以下步驟: a. 任選地在合適的宿主細胞或宿主生物中或在另一合適的表現系統中表現編碼根據本發明技術的多肽的核酸序列,任選地接著是: b. 分離和/或純化根據本發明技術的多肽。 Also provided is a method for producing a polypeptide according to the technology of the present invention, the method at least comprising the following steps: a. Optionally express the nucleic acid sequence encoding the polypeptide according to the technology of the invention in a suitable host cell or host organism or in another suitable expression system, optionally followed by: b. Isolate and/or purify polypeptides according to the technology of the present invention.
此外,本發明技術提供了用作藥物的所述多肽、包含所述多肽的組成物或包含含有編碼所述多肽的核苷酸序列的核酸或載體的組成物。優選地,所述多肽或組成物用於治療急性骨髓性白血病(AML),其中優選地所述AML是復發性和/或難治性AML。Furthermore, the present technology provides the polypeptide, a composition comprising the polypeptide, or a composition comprising a nucleic acid or vector containing a nucleotide sequence encoding the polypeptide for use as a medicament. Preferably, the polypeptide or composition is used to treat acute myeloid leukemia (AML), wherein preferably the AML is relapsed and/or refractory AML.
另外,提供了一種治療AML的方法,其中所述方法包括向有需要的受試者投予醫藥活性量的根據本發明技術的多肽或組成物。優選地所述AML是復發性和/或難治性AML。在優選的實施例中,所述方法進一步包括投予一種或多種另外的治療劑。Additionally, a method of treating AML is provided, wherein the method includes administering to a subject in need thereof a pharmaceutically active amount of a polypeptide or composition according to the present technology. Preferably the AML is relapsed and/or refractory AML. In preferred embodiments, the method further comprises administering one or more additional therapeutic agents.
進一步提供了本發明技術的多肽或組成物在製備用於治療AML的醫藥組成物中的用途,其中優選地AML是復發性和/或難治性AML。Further provided is the use of polypeptides or compositions of the present technology in the preparation of pharmaceutical compositions for the treatment of AML, wherein preferably AML is relapsed and/or refractory AML.
具體地,本發明技術提供了以下實施例:Specifically, the technology of the present invention provides the following embodiments:
實施例1. 一種多肽、包含所述多肽的組成物、或包含含有編碼所述多肽的核苷酸序列的核酸的組成物,所述多肽或組成物用作藥物,其中所述多肽包含至少三個免疫球蛋白單可變結構域(ISVD)或由其組成,其中每個所述ISVD包含任選地經由一個或多個肽連接子連接的三個互補決定區(分別為CDR1至CDR3);並且其中: a) 第一ISVD與T細胞受體αβ(TCRαβ)特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 6或與SEQ ID NO: 6具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 10或與SEQ ID NO: 10具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 14或與SEQ ID NO: 14具有2或1個胺基酸差異的胺基酸序列; b) 第二ISVD與CD33特異性地結合並且包含 iv. CDR1,其包含SEQ ID NO: 7或與SEQ ID NO: 7具有2或1個胺基酸差異的胺基酸序列; v. CDR2,其包含具有SEQ ID NO: 11或與SEQ ID NO: 11具有2或1個胺基酸差異的胺基酸序列;和 vi. CDR3,其包含SEQ ID NO: 15或與SEQ ID NO: 15具有2或1個胺基酸差異的胺基酸序列;和 c) 第三ISVD與CD123特異性地結合並且包含 vii. CDR1,其包含SEQ ID NO: 8或與SEQ ID NO: 8具有2或1個胺基酸差異的胺基酸序列; viii. CDR2,其包含SEQ ID NO: 12或與SEQ ID NO: 12具有2或1個胺基酸差異的胺基酸序列;和 ix. CDR3,其包含SEQ ID NO: 16或與SEQ ID NO: 16具有2或1個胺基酸差異的胺基酸序列, 其中所述ISVD的順序是從N末端開始。 Example 1. A polypeptide, a composition comprising the polypeptide, or a composition comprising a nucleic acid containing a nucleotide sequence encoding the polypeptide, the polypeptide or composition being used as a medicine, wherein the polypeptide comprises at least three or consisting of an immunoglobulin single variable domain (ISVD), wherein each said ISVD comprises three complementarity determining regions (CDR1 to CDR3 respectively) optionally connected via one or more peptide linkers; And among them: a) The first ISVD specifically binds to T cell receptor αβ (TCRαβ) and contains i. CDR1, which contains SEQ ID NO: 6 or an amino acid sequence with 2 or 1 amino acid difference from SEQ ID NO: 6; ii. CDR2 comprising SEQ ID NO: 10 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 10; and iii. CDR3, which includes SEQ ID NO: 14 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 14; b) The second ISVD specifically binds to CD33 and contains iv. CDR1, which contains SEQ ID NO: 7 or an amino acid sequence that differs from SEQ ID NO: 7 by 2 or 1 amino acid; v. CDR2 comprising an amino acid sequence having SEQ ID NO: 11 or having a 2 or 1 amino acid difference from SEQ ID NO: 11; and vi. A CDR3 comprising SEQ ID NO: 15 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 15; and c) The third ISVD specifically binds to CD123 and contains vii. CDR1, which contains SEQ ID NO: 8 or an amino acid sequence that differs from SEQ ID NO: 8 by 2 or 1 amino acid; viii. CDR2, which contains SEQ ID NO: 12 or an amino acid sequence that differs from SEQ ID NO: 12 by 2 or 1 amino acid; and ix. CDR3 comprising SEQ ID NO: 16 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 16, The order of the ISVD starts from the N-terminus.
實施例2. 根據實施例1所述的用於所述用途的組成物,所述組成物是醫藥組成物,所述醫藥組成物還包含至少一種醫藥上可接受的載劑、稀釋劑或賦形劑和/或佐劑,並且任選地包含一種或多種其他醫藥活性多肽和/或化合物。Embodiment 2. The composition for the use according to Embodiment 1, the composition is a pharmaceutical composition, and the pharmaceutical composition further includes at least one pharmaceutically acceptable carrier, diluent or excipient. agents and/or adjuvants, and optionally includes one or more other pharmaceutically active polypeptides and/or compounds.
實施例3. 根據實施例1或2所述的用於所述用途的多肽或組成物,其中: a) 所述第一ISVD包含具有SEQ ID NO: 6的胺基酸序列的CDR1、具有SEQ ID NO: 10的胺基酸序列的CDR2和具有SEQ ID NO: 14的胺基酸序列的CDR3; b) 所述第二ISVD包含具有SEQ ID NO: 7的胺基酸序列的CDR1、具有SEQ ID NO: 11的胺基酸序列的CDR2和具有SEQ ID NO: 15的胺基酸序列的CDR3;並且 c) 所述第三ISVD包含具有SEQ ID NO: 8的胺基酸序列的CDR1、具有SEQ ID NO: 12的胺基酸序列的CDR2和具有SEQ ID NO: 16的胺基酸序列的CDR3。 Embodiment 3. The polypeptide or composition for the use according to Embodiment 1 or 2, wherein: a) The first ISVD includes CDR1 with the amino acid sequence of SEQ ID NO: 6, CDR2 with the amino acid sequence of SEQ ID NO: 10 and CDR3 with the amino acid sequence of SEQ ID NO: 14; b) the second ISVD comprises CDR1 having the amino acid sequence of SEQ ID NO: 7, CDR2 having the amino acid sequence of SEQ ID NO: 11 and CDR3 having the amino acid sequence of SEQ ID NO: 15; and c) The third ISVD includes CDR1 having the amino acid sequence of SEQ ID NO: 8, CDR2 having the amino acid sequence of SEQ ID NO: 12 and CDR3 having the amino acid sequence of SEQ ID NO: 16.
實施例4. 根據實施例1至3中任一項所述的用於所述用途的多肽或組成物,其中: a) 所述第一ISVD的胺基酸序列具有與SEQ ID NO: 2大於90%的序列同一性; b) 所述第二ISVD的胺基酸序列具有與SEQ ID NO: 3大於90%的序列同一性;並且 c) 所述第三ISVD的胺基酸序列具有與SEQ ID NO: 4大於90%同一性的序列同一性。 Embodiment 4. The polypeptide or composition for the use according to any one of embodiments 1 to 3, wherein: a) The amino acid sequence of the first ISVD has greater than 90% sequence identity with SEQ ID NO: 2; b) the amino acid sequence of the second ISVD has greater than 90% sequence identity with SEQ ID NO: 3; and c) The amino acid sequence of the third ISVD has a sequence identity greater than 90% with SEQ ID NO: 4.
實施例5. 根據實施例1至4中任一項所述的用於所述用途的多肽或組成物,其中: a) 所述第一ISVD具有SEQ ID NO: 2的胺基酸序列; b) 所述第二ISVD具有SEQ ID NO: 3的胺基酸序列;並且 c) 所述第三ISVD具有SEQ ID NO: 4的胺基酸序列。 Embodiment 5. The polypeptide or composition for the use according to any one of embodiments 1 to 4, wherein: a) The first ISVD has the amino acid sequence of SEQ ID NO: 2; b) the second ISVD has the amino acid sequence of SEQ ID NO: 3; and c) The third ISVD has the amino acid sequence of SEQ ID NO: 4.
實施例6. 根據實施例1至5中任一項所述的用於所述用途的多肽或組成物,其中所述多肽還包含任選地經由一個或多個肽連接子連接的一個或多個其他基團、殘基、部分或結合單元,其中與沒有所述一個或多個其他基團、殘基、部分或結合單元的相應多肽相比,所述一個或多個其他基團、殘基、部分或結合單元使所述多肽的半衰期增加。Embodiment 6. The polypeptide or composition for the use according to any one of embodiments 1 to 5, wherein the polypeptide further comprises one or more peptides optionally connected via one or more peptide linkers. other groups, residues, moieties or binding units, wherein said one or more other groups, residues, moieties or binding units are less significant than a corresponding polypeptide without said one or more other groups, residues, moieties or binding units. The base, moiety or binding unit increases the half-life of the polypeptide.
實施例7. 根據實施例6所述的用於所述用途的多肽或組成物,其中使所述多肽的半衰期增加的所述一個或多個其他基團、殘基、部分或結合單元選自聚乙二醇分子、血清蛋白或其片段、可與血清蛋白結合的結合單元、Fc部分和可與血清蛋白結合的小蛋白質或肽所組成的群組。Embodiment 7. The polypeptide or composition for the use according to embodiment 6, wherein the one or more other groups, residues, moieties or binding units that increase the half-life of the polypeptide are selected from A group consisting of polyethylene glycol molecules, serum proteins or fragments thereof, binding units that can bind to serum proteins, Fc portions, and small proteins or peptides that can bind to serum proteins.
實施例8. 根據實施例6至7中任一項所述的用於所述用途的多肽或組成物,其中使所述多肽的半衰期增加的所述一個或多個其他基團、殘基、部分或結合單元選自可與血清白蛋白(如人血清白蛋白)或血清免疫球蛋白(如IgG)結合的結合單元所組成的群組。Embodiment 8. The polypeptide or composition for the use according to any one of embodiments 6 to 7, wherein the one or more other groups, residues, which increase the half-life of the polypeptide, The moiety or binding unit is selected from the group of binding units that can bind to serum albumin (eg, human serum albumin) or serum immunoglobulin (eg, IgG).
實施例9. 根據實施例8所述的用於所述用途的多肽或組成物,其中使所述多肽的半衰期增加的所述結合單元是可與人血清白蛋白結合的ISVD。Embodiment 9. The polypeptide or composition for the use according to embodiment 8, wherein the binding unit that increases the half-life of the polypeptide is an ISVD that can bind to human serum albumin.
實施例10. 根據實施例9所述的用於所述用途的多肽或組成物,其中所述與人血清白蛋白結合的ISVD包含 i. CDR1,其包含SEQ ID NO: 9或與SEQ ID NO: 9具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 13或與SEQ ID NO: 13具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 17或與SEQ ID NO: 17具有2或1個胺基酸差異的胺基酸序列。 Embodiment 10. The polypeptide or composition for the use according to embodiment 9, wherein the ISVD that binds to human serum albumin comprises i. CDR1, which contains SEQ ID NO: 9 or an amino acid sequence with 2 or 1 amino acid difference from SEQ ID NO: 9; ii. CDR2 comprising SEQ ID NO: 13 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 13; and iii. CDR3, which comprises SEQ ID NO: 17 or an amino acid sequence that differs from SEQ ID NO: 17 by 2 or 1 amino acid.
實施例11. 根據實施例9至10中任一項所述的用於所述用途的多肽或組成物,其中與人血清白蛋白結合的所述ISVD包含具有SEQ ID NO: 9的胺基酸序列的CDR1、具有SEQ ID NO: 13的胺基酸序列的CDR2和具有SEQ ID NO: 17的胺基酸序列的CDR3。Embodiment 11. The polypeptide or composition for the use according to any one of embodiments 9 to 10, wherein the ISVD that binds to human serum albumin comprises the amino acid having SEQ ID NO: 9 CDR1 of the sequence, CDR2 having the amino acid sequence of SEQ ID NO: 13 and CDR3 having the amino acid sequence of SEQ ID NO: 17.
實施例12. 根據實施例9至11中任一項所述的用於所述用途的多肽或組成物,其中與人血清白蛋白結合的所述ISVD的胺基酸序列具有與SEQ ID NO: 5大於90%的序列同一性。Embodiment 12. The polypeptide or composition for the use according to any one of embodiments 9 to 11, wherein the amino acid sequence of the ISVD that binds to human serum albumin has the same amino acid sequence as SEQ ID NO: 5 Greater than 90% sequence identity.
實施例13. 根據實施例9至12中任一項所述的用於所述用途的多肽或組成物,其中與人血清白蛋白結合的所述ISVD具有SEQ ID NO: 5的胺基酸序列。Embodiment 13. The polypeptide or composition for the use according to any one of embodiments 9 to 12, wherein the ISVD that binds to human serum albumin has the amino acid sequence of SEQ ID NO: 5 .
實施例14. 根據實施例1至13中任一項所述的用於所述用途的多肽或組成物,其中所述多肽的胺基酸序列具有與SEQ ID NO: 1大於90%的序列同一性。Embodiment 14. The polypeptide or composition for the use according to any one of embodiments 1 to 13, wherein the amino acid sequence of the polypeptide has greater than 90% sequence identity with SEQ ID NO: 1 sex.
實施例15. 根據實施例1至14中任一項所述的用於所述用途的多肽或組成物,其中所述多肽包含SEQ ID NO: 1的胺基酸序列或由其組成。Embodiment 15. The polypeptide or composition for the use according to any one of embodiments 1 to 14, wherein the polypeptide comprises or consists of the amino acid sequence of SEQ ID NO: 1.
實施例16. 根據請求項1至15中任一項所述的用於所述用途的多肽或組成物,其用於治療AML。Embodiment 16. The polypeptide or composition for the use according to any one of claims 1 to 15, which is used to treat AML.
實施例17. 根據請求項16所述的用於所述用途的多肽或組成物,其中所述AML是復發性和/或難治性AML。Embodiment 17. The polypeptide or composition for the use according to claim 16, wherein the AML is relapsed and/or refractory AML.
實施例18. 一種多肽,所述多肽包含至少三個免疫球蛋白單可變結構域(ISVD)或由其組成,其中每個所述ISVD包含任選地經由一個或多個肽連接子連接的三個互補決定區(分別為CDR1至CDR3);並且其中: a) 第一ISVD與T細胞受體αβ(TCRαβ)特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 6或與SEQ ID NO: 6具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 10或與SEQ ID NO: 10具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 14或與SEQ ID NO: 14具有2或1個胺基酸差異的胺基酸序列; b) 第二ISVD與CD33特異性地結合並且包含 iv. CDR1,其包含SEQ ID NO: 7或與SEQ ID NO: 7具有2或1個胺基酸差異的胺基酸序列; v. CDR2,其包含SEQ ID NO: 11或與SEQ ID NO: 11具有2或1個胺基酸差異的胺基酸序列;和 vi. CDR3,其包含SEQ ID NO: 15或與SEQ ID NO: 15具有2或1個胺基酸差異的胺基酸序列;和 c) 第三ISVD與CD123特異性地結合並且包含 vii. CDR1,其包含SEQ ID NO: 8或與SEQ ID NO: 8具有2或1個胺基酸差異的胺基酸序列; viii. CDR2,其包含SEQ ID NO: 12或與SEQ ID NO: 12具有2或1個胺基酸差異的胺基酸序列;和 ix. CDR3,其包含SEQ ID NO: 16或與SEQ ID NO: 16具有2或1個胺基酸差異的胺基酸序列, 其中所述ISVD的順序是從N末端開始。 Example 18. A polypeptide comprising or consisting of at least three immunoglobulin single variable domains (ISVDs), wherein each of said ISVDs comprises, optionally linked via one or more peptide linkers Three complementarity determining regions (CDR1 to CDR3 respectively); and among them: a) The first ISVD specifically binds to T cell receptor αβ (TCRαβ) and contains i. CDR1, which contains SEQ ID NO: 6 or an amino acid sequence with 2 or 1 amino acid difference from SEQ ID NO: 6; ii. CDR2 comprising SEQ ID NO: 10 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 10; and iii. CDR3, which includes SEQ ID NO: 14 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 14; b) The second ISVD specifically binds to CD33 and contains iv. CDR1, which contains SEQ ID NO: 7 or an amino acid sequence that differs from SEQ ID NO: 7 by 2 or 1 amino acid; v. CDR2 comprising SEQ ID NO: 11 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 11; and vi. A CDR3 comprising SEQ ID NO: 15 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 15; and c) The third ISVD specifically binds to CD123 and contains vii. CDR1, which contains SEQ ID NO: 8 or an amino acid sequence that differs from SEQ ID NO: 8 by 2 or 1 amino acid; viii. CDR2 comprising SEQ ID NO: 12 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 12; and ix. CDR3 comprising SEQ ID NO: 16 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 16, The order of the ISVD starts from the N-terminus.
實施例19. 根據實施例18所述的多肽,其中: a) 所述第一ISVD包含具有SEQ ID NO: 6的胺基酸序列的CDR1、具有SEQ ID NO: 10的胺基酸序列的CDR2和具有SEQ ID NO: 14的胺基酸序列的CDR3; b) 所述第二ISVD包含具有SEQ ID NO: 7的胺基酸序列的CDR1、具有SEQ ID NO: 11的胺基酸序列的CDR2和具有SEQ ID NO: 15的胺基酸序列的CDR3;並且 c) 所述第三ISVD包含具有SEQ ID NO: 8的胺基酸序列的CDR1、具有SEQ ID NO: 12的胺基酸序列的CDR2和具有SEQ ID NO: 16的胺基酸序列的CDR3。 Embodiment 19. The polypeptide according to embodiment 18, wherein: a) The first ISVD includes CDR1 with the amino acid sequence of SEQ ID NO: 6, CDR2 with the amino acid sequence of SEQ ID NO: 10 and CDR3 with the amino acid sequence of SEQ ID NO: 14; b) the second ISVD comprises CDR1 having the amino acid sequence of SEQ ID NO: 7, CDR2 having the amino acid sequence of SEQ ID NO: 11 and CDR3 having the amino acid sequence of SEQ ID NO: 15; and c) The third ISVD includes CDR1 having the amino acid sequence of SEQ ID NO: 8, CDR2 having the amino acid sequence of SEQ ID NO: 12 and CDR3 having the amino acid sequence of SEQ ID NO: 16.
實施例20. 根據實施例18或19中任一項所述的多肽,其中: a) 所述第一ISVD的胺基酸序列具有與SEQ ID NO: 2大於90%的序列同一性; b) 所述第二ISVD的胺基酸序列具有與SEQ ID NO: 3大於90%的序列同一性;並且 c) 所述第三ISVD的胺基酸序列具有與SEQ ID NO: 4大於90%同一性的序列同一性。 Embodiment 20. The polypeptide according to any one of embodiments 18 or 19, wherein: a) The amino acid sequence of the first ISVD has greater than 90% sequence identity with SEQ ID NO: 2; b) the amino acid sequence of the second ISVD has greater than 90% sequence identity with SEQ ID NO: 3; and c) The amino acid sequence of the third ISVD has a sequence identity greater than 90% with SEQ ID NO: 4.
實施例21. 根據實施例18至20中任一項所述的多肽,其中: a) 所述第一ISVD具有SEQ ID NO: 2的胺基酸序列; b) 所述第二ISVD具有SEQ ID NO: 3的胺基酸序列;並且 c) 所述第三ISVD具有SEQ ID NO: 4的胺基酸序列。 Embodiment 21. The polypeptide according to any one of embodiments 18 to 20, wherein: a) The first ISVD has the amino acid sequence of SEQ ID NO: 2; b) the second ISVD has the amino acid sequence of SEQ ID NO: 3; and c) The third ISVD has the amino acid sequence of SEQ ID NO: 4.
實施例22. 根據實施例18至21中任一項所述的多肽,其中所述多肽還包含任選地經由一個或多個肽連接子連接的一個或多個其他基團、殘基、部分或結合單元,其中與沒有所述一個或多個其他基團、殘基、部分或結合單元的相應多肽相比,所述一個或多個其他基團、殘基、部分或結合單元使所述多肽的半衰期增加。Embodiment 22. The polypeptide of any one of embodiments 18 to 21, wherein the polypeptide further comprises one or more other groups, residues, moieties, optionally connected via one or more peptide linkers or a binding unit, wherein said one or more other groups, residues, moieties or binding units renders said The half-life of the peptide is increased.
實施例23. 根據實施例22所述的多肽,其中使所述多肽的半衰期增加的所述一個或多個其他基團、殘基、部分或結合單元選自聚乙二醇分子、血清蛋白或其片段、可與血清蛋白結合的結合單元、Fc部分和可與血清蛋白結合的小蛋白質或肽所組成的群組。Embodiment 23. The polypeptide of embodiment 22, wherein the one or more other groups, residues, moieties or binding units that increase the half-life of the polypeptide are selected from the group consisting of polyethylene glycol molecules, serum proteins or A group consisting of its fragments, binding units that can bind to serum proteins, Fc portions, and small proteins or peptides that can bind to serum proteins.
實施例24. 根據實施例22至23中任一項所述的多肽,其中使所述多肽的半衰期增加的所述一個或多個其他基團、殘基、部分或結合單元選自可與血清白蛋白(如人血清白蛋白)或血清免疫球蛋白(如IgG)結合的結合單元所組成的群組。Embodiment 24. The polypeptide according to any one of embodiments 22 to 23, wherein the one or more other groups, residues, moieties or binding units that increase the half-life of the polypeptide are selected from the group consisting of compounds that are compatible with serum A group of binding units that bind to albumin (such as human serum albumin) or serum immunoglobulin (such as IgG).
實施例25. 根據實施例24所述的多肽,其中使所述多肽的半衰期增加的所述結合單元是可與人血清白蛋白結合的ISVD。Embodiment 25. The polypeptide of embodiment 24, wherein the binding unit that increases the half-life of the polypeptide is an ISVD that can bind to human serum albumin.
實施例26. 根據實施例25所述的多肽,其中所述與人血清白蛋白結合的ISVD包含 i. CDR1,其包含SEQ ID NO: 9或與SEQ ID NO: 9具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 13或與SEQ ID NO: 13具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 17或與SEQ ID NO: 17具有2或1個胺基酸差異的胺基酸序列。 Embodiment 26. The polypeptide of embodiment 25, wherein the ISVD that binds to human serum albumin comprises i. CDR1, which contains SEQ ID NO: 9 or an amino acid sequence with 2 or 1 amino acid difference from SEQ ID NO: 9; ii. CDR2 comprising SEQ ID NO: 13 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 13; and iii. CDR3, which comprises SEQ ID NO: 17 or an amino acid sequence that differs from SEQ ID NO: 17 by 2 or 1 amino acid.
實施例27. 根據實施例25至26中任一項所述的多肽,其中與人血清白蛋白結合的所述ISVD包含具有SEQ ID NO: 9的胺基酸序列的CDR1、具有SEQ ID NO: 13的胺基酸序列的CDR2和具有SEQ ID NO: 17的胺基酸序列的CDR3。Embodiment 27. The polypeptide according to any one of embodiments 25 to 26, wherein the ISVD that binds to human serum albumin comprises a CDR1 having the amino acid sequence of SEQ ID NO: 9, a CDR1 having the amino acid sequence of SEQ ID NO: 9, CDR2 with the amino acid sequence of 13 and CDR3 with the amino acid sequence of SEQ ID NO: 17.
實施例28. 根據實施例25至27中任一項所述的多肽,其中與人血清白蛋白結合的所述ISVD的胺基酸序列具有與SEQ ID NO: 5大於90%的序列同一性。Embodiment 28. The polypeptide according to any one of embodiments 25 to 27, wherein the amino acid sequence of the ISVD that binds to human serum albumin has greater than 90% sequence identity with SEQ ID NO: 5.
實施例29. 根據實施例25至28中任一項所述的多肽,其中與人血清白蛋白結合的所述ISVD具有SEQ ID NO: 5的胺基酸序列。Embodiment 29. The polypeptide according to any one of embodiments 25 to 28, wherein the ISVD that binds to human serum albumin has the amino acid sequence of SEQ ID NO: 5.
實施例30. 根據實施例18至29中任一項所述的多肽,其中所述多肽的胺基酸序列具有與SEQ ID NO: 1大於90%的序列同一性。Embodiment 30. The polypeptide according to any one of embodiments 18 to 29, wherein the amino acid sequence of the polypeptide has greater than 90% sequence identity with SEQ ID NO: 1.
實施例31. 根據實施例18至29中任一項所述的多肽,其中所述多肽包含SEQ ID NO: 1的胺基酸序列或由其組成。Embodiment 31. The polypeptide according to any one of embodiments 18 to 29, wherein the polypeptide comprises or consists of the amino acid sequence of SEQ ID NO: 1.
實施例32. 一種核酸,所述核酸包含編碼根據實施例18至31中任一項所述的多肽的核苷酸序列。Embodiment 32. A nucleic acid comprising a nucleotide sequence encoding a polypeptide according to any one of embodiments 18 to 31.
實施例33. 一種包含根據實施例32所述的核酸的宿主或宿主細胞。Embodiment 33. A host or host cell comprising the nucleic acid according to Embodiment 32.
實施例34. 一種用於產生根據實施例18至31中任一項所述的多肽的方法,所述方法至少包括以下步驟: a) 在合適的宿主細胞或宿主生物中或在另一種合適的表現系統中表現根據實施例32所述的核酸;任選地接著是: b) 分離和/或純化根據實施例18至31中任一項所述的多肽。 Embodiment 34. A method for producing the polypeptide according to any one of embodiments 18 to 31, the method at least comprising the following steps: a) expressing the nucleic acid according to Example 32 in a suitable host cell or host organism or in another suitable expression system; optionally followed by: b) Isolating and/or purifying the polypeptide according to any one of embodiments 18 to 31.
實施例35. 一種組成物,所述組成物包含至少一種根據實施例18至31中任一項所述的多肽或根據實施例32所述的核酸。Embodiment 35. A composition comprising at least one polypeptide according to any one of embodiments 18 to 31 or a nucleic acid according to embodiment 32.
實施例36. 根據實施例35所述的組成物,所述組成物是醫藥組成物,所述醫藥組成物還包含至少一種醫藥上可接受的載劑、稀釋劑或賦形劑和/或佐劑,並且任選地包含一種或多種另外的醫藥活性多肽和/或化合物。Embodiment 36. The composition according to Embodiment 35, which is a pharmaceutical composition, and the pharmaceutical composition further includes at least one pharmaceutically acceptable carrier, diluent or excipient and/or adjuvant. agent, and optionally includes one or more additional pharmaceutically active polypeptides and/or compounds.
實施例37. 一種治療AML的方法,其中所述方法包括向有需要的受試者投予醫藥活性量的根據請求項18至31中任一項所述的多肽或根據請求項35至36中任一項所述的組成物。Embodiment 37. A method of treating AML, wherein the method comprises administering to a subject in need a pharmaceutically active amount of a polypeptide according to any one of claims 18 to 31 or a polypeptide according to claims 35 to 36 The composition of any one.
實施例38. 根據請求項37所述的方法,其中所述AML是復發性和/或難治性AML。Embodiment 38. The method of claim 37, wherein the AML is relapsed and/or refractory AML.
實施例39. 根據請求項18至31中任一項所述的多肽或根據請求項35或36中任一項所述的組成物在製備用於治療AML的醫藥組成物中的用途。Embodiment 39. Use of the polypeptide according to any one of claims 18 to 31 or the composition according to any one of claims 35 or 36 in the preparation of a pharmaceutical composition for the treatment of AML.
實施例40. 根據請求項39所述的多肽或組成物的用途,其中所述AML是復發性和/或難治性AML。Embodiment 40. Use of the polypeptide or composition according to claim 39, wherein the AML is relapsed and/or refractory AML.
本發明技術旨在提供用於治療急性骨髓性白血病(AML)的新型藥物。The technology of the present invention aims to provide new drugs for the treatment of acute myeloid leukemia (AML).
本發明的諸位發明人發現雙重靶向急性骨髓性白血病(AML)細胞上的CD33和CD123與靶向T細胞上的T細胞受體αβ(TCR αβ)組合的多肽(或ISVD構築體)導致AML細胞的有效殺傷。殺傷活性與單一靶向基準(如CD33/CD3 AMG 330 BiTE或CD123/CD3 MGD006 DART)是相當的或者甚至更高。由於患者內和患者間樣品中AML細胞上CD33和CD123表現的高度異質性,與單一靶向基準相比,本發明的多肽提供了更廣泛的患者覆蓋範圍。The inventors of the present invention discovered that a polypeptide (or ISVD construct) that dually targets CD33 and CD123 on acute myeloid leukemia (AML) cells in combination with targeting T cell receptor αβ (TCR αβ) on T cells leads to AML Effective killing of cells. Killing activity is comparable or even higher than single-target benchmarks such as CD33/CD3 AMG 330 BiTE or CD123/CD3 MGD006 DART. Due to the high heterogeneity of CD33 and CD123 expression on AML cells within and between patient samples, the polypeptides of the invention provide broader patient coverage compared to single-target benchmarks.
在一些實施例中,本發明技術的多肽被高效產生(例如在微生物宿主中),並且在高濃度下顯示低黏度,這對於皮下投予是有利且方便的。此外,此類多肽對待治療受試者中預先存在的抗體(即在第一次用所述抗體構築體治療之前存在於受試者中的抗體)具有有限的反應性。在優選實施例中,此類多肽在待治療的受試者中展現出足夠長的半衰期,使得可以方便地將連續的治療間隔開。In some embodiments, polypeptides of the present technology are efficiently produced (eg, in microbial hosts) and exhibit low viscosity at high concentrations, which is advantageous and convenient for subcutaneous administration. Furthermore, such polypeptides have limited reactivity with pre-existing antibodies in the subject to be treated (i.e., antibodies present in the subject prior to first treatment with the antibody construct). In preferred embodiments, such polypeptides exhibit a sufficiently long half-life in the subject to be treated such that successive treatments can be conveniently spaced apart.
所述多肽是至少雙特異性的,但也可以是例如三特異性、四特異性或五特異性的。此外,所述多肽是至少四價的,但是也可以是例如五價的或六價的,等等。The polypeptide is at least bispecific, but may also be trispecific, tetraspecific or pentaspecific, for example. Furthermore, the polypeptide is at least tetravalent, but may also be, for example, pentavalent or hexavalent, among others.
術語「 雙特異性」、「 三特異性」、「 四特異性」或「 五特異性」均落在術語「 多特異性」範圍內,並且分別是指與兩種、三種、四種或五種不同標靶分子結合。術語「 二價」、「 三價」、「 四價」、「 五價」或「 六價」均落在術語「 多價」的範圍內,並且分別表示兩個、三個、四個或五個結合單元(如ISVD)的存在。例如,所述多肽可以是四特異性-四價的,如包含四個ISVD或由其組成的多肽,其中一個ISVD與人TCRαβ結合,一個ISVD與人CD33結合,一個ISVD與CD123結合並且一個ISVD與人血清白蛋白結合(如SEQ ID NO: 1中所示的ISVD構築體)。例如,如果兩個ISVD結合同一標靶上兩個不同的表位,例如,如果兩個ISVD與TCRαβ結合,則所述多肽可以同時是雙互補位的。術語「 雙互補位」是指與同一標靶分子的兩個不同部分(例如表位)結合。 The terms " bispecific ,"" trispecific ,"" tetraspecific, " or " pentaspecific " all fall within the term " multispecific " and refer to two, three, four, or five species, respectively. combination of different target molecules. The terms " bivalent ", " trivalent ", " tetravalent ", " pentavalent " or " hexavalent " fall within the scope of the term " polyvalent " and mean two, three, four or five, respectively. The existence of binding units (such as ISVD). For example, the polypeptide may be tetraspecific-tetravalent, such as a polypeptide comprising or consisting of four ISVDs, one ISVD binding to human TCRαβ, one ISVD binding to human CD33, one ISVD binding to CD123 and one ISVD Binds to human serum albumin (ISVD construct as shown in SEQ ID NO: 1). For example, if two ISVDs bind to two different epitopes on the same target, for example, if two ISVDs bind to TCRαβ, the polypeptide may be biparatopic at the same time. The term " biparatope " refers to binding to two different parts (eg, epitopes) of the same target molecule.
如本文所用,術語「第一ISVD」、「第二ISVD」、「第三ISVD」等僅表示ISVD彼此之間的相對位置,其中編號從本發明的多肽的N末端開始。因此,「第一ISVD」比「第二ISVD」更靠近N末端,而「第二ISVD」比「第三ISVD」更靠近N末端,等等。因此,當從C末端考慮時,ISVD排列是相反的。由於編號不是絕對的,並且僅表示所述至少三個ISVD的相對位置,因此不排除多肽中可能存在其他結合單元/構築塊,如與TCRαβ、CD33或CD123結合的另外的ISVD,或者與另一個標靶結合的ISVD。例如,如下文進一步所述(具體參見章節「(體內)半衰期延長」),所述多肽可以進一步包含與人血清白蛋白結合的另一個ISVD,其可以是位於至少三個ISVD的C末端的第四ISVD。此外,不排除可以在其間放置其他結合單元/構築塊(如ISVD)的可能性。例如,所述多肽可以進一步包含甚至可以位於例如「第二ISVD」與「第三ISVD」之間的另一個ISVD。As used herein, the terms "first ISVD", "second ISVD", "third ISVD" and the like simply refer to the relative position of the ISVDs to each other, where numbering begins with the N-terminus of the polypeptide of the invention. Therefore, the "first ISVD" is closer to the N-terminus than the "second ISVD", and the "second ISVD" is closer to the N-terminus than the "third ISVD", and so on. Therefore, the ISVD arrangement is reversed when considered from the C terminus. Since the numbering is not absolute and only represents the relative position of the at least three ISVDs, it is not excluded that there may be other binding units/building blocks in the polypeptide, such as additional ISVDs that bind to TCRαβ, CD33 or CD123, or to another Target-binding ISVD. For example, as described further below (see in particular the section "(In Vivo) Half-life Extension"), the polypeptide may further comprise another ISVD that binds to human serum albumin, which may be the C-terminus of at least three ISVDs. Four ISVDs. Furthermore, the possibility that other binding units/building blocks (such as ISVD) could be placed in between is not excluded. For example, the polypeptide may further comprise another ISVD which may even be located between, for example, a "second ISVD" and a "third ISVD".
鑒於上述,本發明提供了包含至少三個ISVD或由其組成的多肽,其中至少一個ISVD與TCRαβ特異性地結合,至少一個ISVD與CD33特異性地結合並且至少一個ISVD與CD123特異性地結合。In view of the above, the present invention provides polypeptides comprising or consisting of at least three ISVDs, wherein at least one ISVD specifically binds to TCRαβ, at least one ISVD specifically binds to CD33 and at least one ISVD specifically binds to CD123.
所述多肽的組分(優選地ISVD)可以透過一個或多個合適的連接子(如肽連接子)彼此連接。The components of the polypeptide (preferably ISVD) can be linked to each other via one or more suitable linkers (eg peptide linkers).
使用連接子連接兩個或更多個(多)肽是本領域熟知的。表A-5中示出示例性肽連接子。一類常用的肽連接子稱為「Gly-Ser」或「GS」連接子。這些是基本上由甘胺酸(G)和絲胺酸(S)殘基組成的連接子,並且通常包含肽基序的一個或多個重複,所述肽基序如GGGGS(SEQ ID NO: 77)基序(例如,具有式(Gly-Gly-Gly-Gly-Ser)n,其中n可以是1、2、3、4、5、6、7或更大)。此類GS連接子的一些經常使用的例子是9GS連接子(GGGGSGGGS,SEQ ID NO: 80)、15GS連接子(n=3)和35GS連接子(n=7)。參見例如Chen等人,Adv. Drug Deliv. Rev. 2013年10月15日;65(10): 1357–1369;和Klein等人,Protein Eng. Des. Sel. (2014) 27 (10): 325-330。在本發明的多肽中,使用9GS連接子將多肽的組分彼此連接是優選的。The use of linkers to join two or more (poly)peptides is well known in the art. Exemplary peptide linkers are shown in Table A-5. One type of commonly used peptide linker is called "Gly-Ser" or "GS" linker. These are linkers consisting essentially of glycine (G) and serine (S) residues and typically contain one or more repeats of a peptide motif such as GGGGS (SEQ ID NO: 77) A motif (eg, having the formula (Gly-Gly-Gly-Gly-Ser)n, where n can be 1, 2, 3, 4, 5, 6, 7 or greater). Some frequently used examples of such GS linkers are the 9GS linker (GGGGSGGGS, SEQ ID NO: 80), the 15GS linker (n=3) and the 35GS linker (n=7). See, for example, Chen et al., Adv. Drug Deliv. Rev. 2013 Oct 15;65(10):1357–1369; and Klein et al., Protein Eng. Des. Sel. (2014) 27(10):325 -330. In the polypeptides of the invention, it is preferred to use a 9GS linker to link the components of the polypeptide to each other.
在優選的實施例中,與TCRαβ特異性地結合的ISVD位於所述多肽的N末端處。諸位發明人令人驚訝地發現,這種構型可以增加多肽的生產產量。In preferred embodiments, the ISVD that specifically binds TCRαβ is located at the N-terminus of the polypeptide. The inventors surprisingly found that this configuration can increase the production yield of the polypeptide.
此外,在優選的實施例中,與CD33特異性地結合的ISVD位於與TCRαβ特異性地結合的ISVD的C末端處。Furthermore, in a preferred embodiment, the ISVD that specifically binds to CD33 is located at the C-terminus of the ISVD that specifically binds to TCRαβ.
在甚至更優選的實施例中,與CD123特異性地結合的ISVD位於與CD33特異性地結合的ISVD的C末端處,所述與CD33特異性地結合的ISVD本身位於與TCRαβ特異性地結合的ISVD的C末端。In an even more preferred embodiment, the ISVD that specifically binds to CD123 is located at the C-terminus of the ISVD that specifically binds to CD33, which itself is located at the C-terminus of the ISVD that specifically binds to TCRαβ C terminus of ISVD.
因此,優選地,所述多肽按從多肽的N末端開始的順序包含以下或由以下組成:與TCRαβ特異性地結合的第一ISVD、與CD33特異性地結合的第二ISVD、和與CD123特異性地結合的第三ISVD以及為所述多肽提供如本文所定義的增加的半衰期的任選的結合單元。使所述多肽的半衰期增加的結合單元優選地是ISVD。Therefore, preferably, the polypeptide comprises or consists of the following in order starting from the N-terminus of the polypeptide: a first ISVD that specifically binds to TCRαβ, a second ISVD that specifically binds to CD33, and a second ISVD that specifically binds to CD123 A third ISVD that binds selectively and an optional binding unit that provides the polypeptide with an increased half-life as defined herein. The binding unit that increases the half-life of the polypeptide is preferably an ISVD.
甚至更優選地,所述多肽按從多肽的N末端開始的順序包含以下或由以下組成:與TCRαβ特異性地結合的ISVD、連接子、與CD33特異性地結合的ISVD、連接子、與CD123特異性地結合的ISVD、連接子、和與人血清白蛋白結合的ISVD。更具體地,所述多肽按從多肽的N末端開始的順序包含以下或由以下組成:與TCRαβ特異性地結合的ISVD、9GS連接子、與CD33特異性地結合的ISVD、9GS連接子、與CD123特異性地結合的ISVD、20GS連接子、和與人血清白蛋白結合的ISVD。Even more preferably, the polypeptide comprises or consists of the following in order starting from the N-terminus of the polypeptide: an ISVD that specifically binds to TCRαβ, a linker, an ISVD that specifically binds to CD33, a linker, and CD123 Specific binding ISVD, linker, and ISVD binding to human serum albumin. More specifically, the polypeptide includes or consists of the following in order from the N-terminus of the polypeptide: an ISVD that specifically binds to TCRαβ, a 9GS linker, an ISVD that specifically binds to CD33, a 9GS linker, and CD123 specifically binds to ISVD, 20GS linker, and ISVD to human serum albumin.
所述多肽的此類構型可以提供增加的生產產量、良好CMC特徵以及關於免疫反應的調節優化的功能性和更強的效力。Such configurations of the polypeptides may provide increased production yields, good CMC characteristics as well as optimized functionality and greater potency with respect to the modulation of immune responses.
優選地,本發明技術的多肽展現出與人血清中預先存在的抗體降低的結合。為此,在一個實施例中,所述多肽在至少一個ISVD中,但優選地在每個ISVD中包含胺基酸位置11處的擷胺酸(V)以及胺基酸位置89處的白胺酸(L)(根據Kabat編號)。在另一個實施例中,所述多肽在C末端ISVD的C末端包含1至5個(優選天然存在的)胺基酸的延伸,如單個丙胺酸(A)延伸。ISVD的C末端通常是VTVSS(SEQ ID NO: 93)。在另一個實施例中,所述多肽在至少一個ISVD中包含位置110(根據Kabat編號)處的離胺酸(K)或麩醯胺酸(Q)。在另一個實施例中,所述ISVD在至少一個ISVD中包含位置112(根據Kabat編號)處的離胺酸(K)或麩醯胺酸(Q)。在這些實施例中,所述ISVD的C末端是VKVSS(SEQ ID NO: 94)、VQVSS(SEQ ID NO: 95)、VTVKS(SEQ ID NO: 96)、VTVQS(SEQ ID NO: 97)、VKVKS(SEQ ID NO: 98)、VKVQS(SEQ ID NO: 99)、VQVKS(SEQ ID NO: 100)或VQVQS(SEQ ID NO: 101),使得在添加單個丙胺酸後,所述多肽的C末端例如包含序列VTVSSA(SEQ ID NO: 102)、VKVSSA(SEQ ID NO: 103)、VQVSSA(SEQ ID NO: 104)、VTVKSA(SEQ ID NO: 105)、VTVQSA(SEQ ID NO: 106)、VKVKSA(SEQ ID NO: 107)、VKVQSA(SEQ ID NO: 108)、VQVKSA(SEQ ID NO: 109)或VQVQSA(SEQ ID NO: 110),優選VTVSSA(SEQ ID NO: 102)。在另一個實施例中,所述多肽在每個ISVD中包含胺基酸位置11處的擷胺酸(V)和胺基酸位置89處的白胺酸(L)(根據Kabat編號),任選地在至少一個ISVD中包含位置110(根據Kabat編號)處的離胺酸(K)或麩醯胺酸(Q),並且在C末端ISVD的C末端包含1至5個(優選天然存在的)胺基酸的延伸,如單個丙胺酸(A)延伸(使得所述多肽的C末端例如包含序列VTVSSA(SEQ ID NO: 102)、VKVSSA(SEQ ID NO: 103)或VQVSSA(SEQ ID NO: 104),優選VTVSSA(SEQ ID NO: 102))。關於這一方面的更多資訊,參見例如WO 2012/175741和WO 2015/173325。Preferably, the polypeptides of the present technology exhibit reduced binding to pre-existing antibodies in human serum. To this end, in one embodiment, the polypeptide comprises in at least one ISVD, but preferably in each ISVD, methamine (V) at amino acid position 11 and leucine at amino acid position 89 Acid (L) (according to Kabat number). In another embodiment, the polypeptide comprises a stretch of 1 to 5 (preferably naturally occurring) amino acids at the C-terminus of the C-terminal ISVD, such as a single alanine (A) stretch. The C-terminus of ISVD is usually VTVSS (SEQ ID NO: 93). In another embodiment, the polypeptide comprises lysine (K) or glutamine (Q) at position 110 (according to Kabat numbering) in at least one ISVD. In another embodiment, the ISVDs comprise lysine (K) or glutamic acid (Q) at position 112 (according to Kabat numbering) in at least one ISVD. In these embodiments, the C-terminus of the ISVD is VKVSS (SEQ ID NO: 94), VQVSS (SEQ ID NO: 95), VTVKS (SEQ ID NO: 96), VTVQS (SEQ ID NO: 97), VKVKS (SEQ ID NO: 98), VKVQS (SEQ ID NO: 99), VQVKS (SEQ ID NO: 100) or VQVQS (SEQ ID NO: 101), such that upon addition of a single alanine, the C-terminus of the polypeptide is e.g. Contains the sequences VTVSSA (SEQ ID NO: 102), VKVSSA (SEQ ID NO: 103), VQVSSA (SEQ ID NO: 104), VTVKSA (SEQ ID NO: 105), VTVQSA (SEQ ID NO: 106), VKVKSA (SEQ ID NO: 107), VKVQSA (SEQ ID NO: 108), VQVKSA (SEQ ID NO: 109) or VQVQSA (SEQ ID NO: 110), preferably VTVSSA (SEQ ID NO: 102). In another embodiment, the polypeptide comprises, in each ISVD, a jutamine (V) at amino acid position 11 and a leucine (L) at amino acid position 89 (according to Kabat numbering), either Optionally comprise lysine (K) or glutamic acid (Q) at position 110 (according to Kabat numbering) in at least one ISVD and at the C-terminus the C-terminus of the ISVD from 1 to 5 (preferably naturally occurring ) amino acid extension, such as a single alanine (A) extension (such that the C-terminus of the polypeptide includes, for example, the sequence VTVSSA (SEQ ID NO: 102), VKVSSA (SEQ ID NO: 103) or VQVSSA (SEQ ID NO: 104), preferably VTVSSA (SEQ ID NO: 102)). For more information on this aspect, see for example WO 2012/175741 and WO 2015/173325.
在優選的實施例中,本發明的多肽包含具有與SEQ ID NO: 1大於90%(如大於95%或大於99%)的序列同一性的胺基酸序列或由其組成,其中四個ISVD的CDR分別如以下章節「免疫球蛋白單可變結構域」和「(體內)半衰期延長」中示出的項A至D(或A'至D',如果使用Kabat定義)所定義,其中特別地: • 與TCRαβ特異性地結合的ISVD具有含有SEQ ID NO: 6的胺基酸序列的CDR1、含有SEQ ID NO: 10的胺基酸序列的CDR2和含有SEQ ID NO: 14的胺基酸序列的CDR3; • 與CD33特異性地結合的ISVD具有含有SEQ ID NO: 7的胺基酸序列的CDR1、含有SEQ ID NO: 11的胺基酸序列的CDR2和含有SEQ ID NO: 15的胺基酸序列的CDR3; • 與CD123特異性地結合的ISVD具有含有SEQ ID NO: 8的胺基酸序列的CDR1、含有SEQ ID NO: 12的胺基酸序列的CDR2和含有SEQ ID NO: 16的胺基酸序列的CDR3;並且 • 與人血清白蛋白結合的ISVD具有含有SEQ ID NO: 9的胺基酸序列的CDR1、含有SEQ ID NO: 13的胺基酸序列的CDR2和含有SEQ ID NO: 17的胺基酸序列的CDR3, 或者可替代地,如果使用Kabat定義: • 與TCRαβ特異性地結合的ISVD具有含有SEQ ID NO: 34的胺基酸序列的CDR1、含有SEQ ID NO: 38的胺基酸序列的CDR2和含有SEQ ID NO: 42的胺基酸序列的CDR3; • 與CD33特異性地結合的ISVD具有含有SEQ ID NO: 35的胺基酸序列的CDR1、含有SEQ ID NO: 39的胺基酸序列的CDR2和含有SEQ ID NO: 43的胺基酸序列的CDR3; • 與CD123特異性地結合的ISVD具有含有SEQ ID NO: 36的胺基酸序列的CDR1、含有SEQ ID NO: 40的胺基酸序列的CDR2和含有SEQ ID NO: 44的胺基酸序列的CDR3;並且 • 與人血清白蛋白結合的ISVD具有含有SEQ ID NO: 37的胺基酸序列的CDR1、含有SEQ ID NO: 41的胺基酸序列的CDR2和含有SEQ ID NO: 45的胺基酸序列的CDR3。 In a preferred embodiment, the polypeptide of the invention comprises or consists of an amino acid sequence having greater than 90% (eg greater than 95% or greater than 99%) sequence identity with SEQ ID NO: 1, wherein four ISVD The CDRs are as defined by items A to D (or A' to D', if Kabat definitions are used) shown in the following sections "Immunoglobulin single variable domains" and "(In vivo) half-life extension" respectively, where in particular land: • The ISVD that specifically binds to TCRαβ has CDR1 containing the amino acid sequence of SEQ ID NO: 6, CDR2 containing the amino acid sequence of SEQ ID NO: 10, and CDR2 containing the amino acid sequence of SEQ ID NO: 14 CDR3; • The ISVD that specifically binds to CD33 has a CDR1 containing the amino acid sequence of SEQ ID NO: 7, a CDR2 containing the amino acid sequence of SEQ ID NO: 11, and a CDR2 containing the amino acid sequence of SEQ ID NO: 15. CDR3; • The ISVD that specifically binds to CD123 has a CDR1 containing the amino acid sequence of SEQ ID NO: 8, a CDR2 containing the amino acid sequence of SEQ ID NO: 12, and a CDR2 containing the amino acid sequence of SEQ ID NO: 16 CDR3; and • The ISVD that binds to human serum albumin has a CDR1 containing the amino acid sequence of SEQ ID NO: 9, a CDR2 containing the amino acid sequence of SEQ ID NO: 13, and a CDR2 containing the amino acid sequence of SEQ ID NO: 17 CDR3, Or alternatively, if using Kabat definition: • The ISVD that specifically binds to TCRαβ has CDR1 containing the amino acid sequence of SEQ ID NO: 34, CDR2 containing the amino acid sequence of SEQ ID NO: 38, and CDR1 containing the amino acid sequence of SEQ ID NO: 42 CDR3; • The ISVD that specifically binds to CD33 has CDR1 containing the amino acid sequence of SEQ ID NO: 35, CDR2 containing the amino acid sequence of SEQ ID NO: 39, and CDR1 containing the amino acid sequence of SEQ ID NO: 43. CDR3; • The ISVD that specifically binds to CD123 has CDR1 containing the amino acid sequence of SEQ ID NO: 36, CDR2 containing the amino acid sequence of SEQ ID NO: 40, and CDR1 containing the amino acid sequence of SEQ ID NO: 44. CDR3; and • The ISVD that binds to human serum albumin has a CDR1 containing the amino acid sequence of SEQ ID NO: 37, a CDR2 containing the amino acid sequence of SEQ ID NO: 41, and a CDR2 containing the amino acid sequence of SEQ ID NO: 45. CDR3.
特別地,所述多肽優選包含SEQ ID NO: 1的胺基酸序列或由其組成。在最優選的實施例中,所述多肽由SEQ ID NO: 1的胺基酸序列組成。In particular, the polypeptide preferably comprises or consists of the amino acid sequence of SEQ ID NO: 1. In the most preferred embodiment, the polypeptide consists of the amino acid sequence of SEQ ID NO: 1.
與由SEQ ID NO: 1的胺基酸組成的多肽相比,本發明的多肽對人TCRαβ和對人CD33以及對人CD123優選地具有至少一半的結合親和力,更優選地至少相同的結合親和力,其中所述結合親和力是使用相同的方法(如SPR)測量的。Compared with the polypeptide consisting of the amino acids of SEQ ID NO: 1, the polypeptide of the present invention preferably has at least half the binding affinity to human TCRαβ and to human CD33 and to human CD123, and more preferably at least the same binding affinity, Where the binding affinity is measured using the same method (eg SPR).
5.15.1 免疫球蛋白單可變結構域Immunoglobulin single variable domain
術語「免疫球蛋白單可變結構域」(ISVD)可與「單可變結構域」互換使用,定義了其中抗原結合位點存在於單個免疫球蛋白結構域上並由其形成的免疫球蛋白分子。這使免疫球蛋白單可變結構域與「常規」免疫球蛋白(例如單株抗體)或其片段(如Fab、Fab'、F(ab') 2、scFv、二scFv)區分開來,其中兩個免疫球蛋白結構域、特別是兩個可變結構域相互作用形成抗原結合位點。通常,在常規的免疫球蛋白中,重鏈可變結構域(V H)和輕鏈可變結構域(V L)相互作用形成抗原結合位點。在這種情況下,V H和V L二者的互補決定區(CDR)將促成抗原結合位點,即總共6個CDR將參與抗原結合位點的形成。 The term "immunoglobulin single variable domain" (ISVD) is used interchangeably with "single variable domain" and defines an immunoglobulin in which the antigen-binding site is present on and formed from a single immunoglobulin domain. molecular. This distinguishes immunoglobulin single variable domains from "conventional" immunoglobulins (e.g. monoclonal antibodies) or fragments thereof (e.g. Fab, Fab', F(ab') 2 , scFv, di-scFv), where Two immunoglobulin domains, particularly two variable domains, interact to form an antigen-binding site. Typically, in conventional immunoglobulins, the heavy chain variable domain ( VH ) and the light chain variable domain (VL ) interact to form the antigen-binding site. In this case, the complementarity determining regions (CDRs) of both VH and VL will contribute to the antigen-binding site, that is, a total of 6 CDRs will participate in the formation of the antigen-binding site.
鑒於以上定義,常規4鏈抗體(如IgG、IgM、IgA、IgD或IgE分子;本領域已知的)的抗原結合結構域或者源自這種常規4鏈抗體的Fab片段、F(ab') 2片段、Fv片段(如二硫化物連接的Fv或scFv片段)或雙抗體(本領域中全部已知的)將通常不被視為免疫球蛋白單可變結構域,因為在這些情況下,不是一個(單個)免疫球蛋白結構域發生與相應抗原表位的結合,而是一對(締合的)免疫球蛋白結構域(如輕鏈和重鏈可變結構域)即免疫球蛋白結構域的V H-V L對發生與相應抗原表位的結合,其共同地與相應抗原表位結合。 In view of the above definition, the antigen-binding domain of a conventional 4-chain antibody (such as an IgG, IgM, IgA, IgD or IgE molecule; known in the art) or a Fab fragment, F(ab') derived from such a conventional 4-chain antibody 2 fragments, Fv fragments (such as disulfide-linked Fv or scFv fragments) or diabodies (all known in the art) will generally not be considered immunoglobulin single variable domains because in these cases, It is not a (single) immunoglobulin domain that binds to the corresponding antigenic epitope, but a pair (associated) immunoglobulin domains (such as light chain and heavy chain variable domains), that is, the immunoglobulin structure Binding to the corresponding antigenic epitope occurs with the VH - VL pairs of the domains, which collectively bind to the corresponding antigenic epitope.
相比之下,免疫球蛋白單可變結構域能夠在不與另外的免疫球蛋白可變結構域配對的情況下與抗原表位特異性地結合。免疫球蛋白單可變結構域的結合位點由單個V H、單個V HH或單個V L結構域形成。 In contrast, immunoglobulin single variable domains are capable of specifically binding to antigenic epitopes without pairing with additional immunoglobulin variable domains. The binding site of an immunoglobulin single variable domain is formed by a single VH , a single VHH , or a single VL domain.
因此,所述單可變結構域可以是輕鏈可變結構域序列(例如,V L序列)或其合適的片段;或者重鏈可變結構域序列(例如,V H序列或V HH序列)或其合適的片段;只要它能夠形成單個抗原結合單元(即,基本上由單可變結構域組成的功能性抗原結合單元,使得單個抗原結合結構域不需要與另一個可變結構域相互作用以形成功能性抗原結合單元)。 Thus, the single variable domain may be a light chain variable domain sequence (e.g., a VL sequence) or a suitable fragment thereof; or a heavy chain variable domain sequence (e.g., a VH sequence or a VHH sequence) or a suitable fragment thereof; as long as it is capable of forming a single antigen-binding unit (i.e., a functional antigen-binding unit consisting essentially of a single variable domain such that the single antigen-binding domain does not need to interact with another variable domain to form a functional antigen-binding unit).
免疫球蛋白單可變結構域(ISVD)可以是例如重鏈ISVD,如V H、V HH,包括駝類化V H或人類化V HH。優選地,其是V HH,包括駝類化V H或人類化V HH。重鏈ISVD可以源自常規四鏈抗體或重鏈抗體。 An immunoglobulin single variable domain (ISVD) may be, for example, a heavy chain ISVD, such as VH , VHH , including camelid VH or humanized VHH . Preferably, it is a VHH , including camelid VH or humanized VHH . Heavy chain ISVD can be derived from conventional quadribodies or heavy chain antibodies.
例如,免疫球蛋白單可變結構域可以是單結構域抗體(或適合用作單結構域抗體的胺基酸序列)、「dAb」或dAb(或適合用作dAb的胺基酸序列)(如本文所定義,並且包括但不限於NANOBODY® ISVD);其他單可變結構域,或其任一種的任何合適的片段。For example, an immunoglobulin single variable domain may be a single domain antibody (or an amino acid sequence suitable for use as a single domain antibody), a "dAb" or a dAb (or an amino acid sequence suitable for use as a dAb) ( As defined herein, and including, but not limited to, NANOBODY® ISVD); other single variable domains, or any suitable fragment of any of them.
特別地,免疫球蛋白單可變結構域可以是NANOBODY® ISVD(包括人類化V HH或駝類化V H)或其合適的片段。[注意:NANOBODY®、NANOBODIES®和NANOCLONE®是Ablynx N.V.的註冊商標] In particular, the immunoglobulin single variable domain may be a NANOBODY® ISVD (including humanized VHH or camelidized VH ) or a suitable fragment thereof. [Note: NANOBODY®, NANOBODIES® and NANOCLONE® are registered trademarks of Ablynx NV]
「V HH結構域」也稱為V HH、V HH抗體片段和V HH抗體,最初已被描述為「重鏈抗體」的(即「無輕鏈抗體」的;Hamers-Casterman等人,Nature 363: 446-448, 1993)抗原結合免疫球蛋白可變結構域。已選擇術語「V HH結構域」以將這些可變結構域與常規4鏈抗體中存在的重鏈可變結構域(其在本文中稱為「V H結構域」)以及與常規4鏈抗體中存在的輕鏈可變結構域(其在本文中稱為「V L結構域」)區分開來。對於V HH的進一步描述,參考了Muyldermans的綜述文章(Reviews in Molecular Biotechnology 74: 277-302, 2001),以及作為一般背景技術提及的以下專利申請:布魯塞爾自由大學(Vrije Universiteit Brussel)的WO 94/04678、WO 95/04079和WO 96/34103;Unilever的WO 94/25591、WO 99/37681、WO 00/40968、WO 00/43507、WO 00/65057、WO 01/40310、WO 01/44301、EP 1134231和WO 02/48193;比利時弗蘭德生物技術研究院(Vlaams Instituut voor Biotechnologie,VIB)的WO 97/49805、WO 01/21817、WO 03/035694、WO 03/054016和WO 03/055527;Algonomics N.V.和Ablynx N.V.的WO 03/050531;加拿大國家研究院(National Research Council of Canada)的WO 01/90190;抗體研究所(Institute of Antibodies)的WO 03/025020(= EP 1433793);以及Ablynx N.V.的WO 04/041867、WO 04/041862、WO 04/041865、WO 04/041863、WO 04/062551、WO 05/044858、WO 06/40153、WO 06/079372、WO 06/122786、WO 06/122787和WO 06/122825。 " VHH domain", also known as VHH , VHH antibody fragment and VHH antibody, has originally been described as "heavy chain antibody" (i.e., "light chain antibody"; Hamers-Casterman et al., Nature 363 : 446-448, 1993) Antigen-binding immunoglobulin variable domains. The term " V domain" has been chosen to distinguish these variable domains from the heavy chain variable domains found in conventional 4-chain antibodies (which are referred to herein as " V domains") and from conventional 4-chain antibodies. The light chain variable domain (which is referred to herein as the " VL domain") is distinguished from the light chain variable domain present in the VL domain. For further description of VHH , reference is made to Muyldermans' review article (Reviews in Molecular Biotechnology 74: 277-302, 2001), and to the following patent application mentioned as general background: WO 94 of Vrije Universiteit Brussel /04678, WO 95/04079 and WO 96/34103; Unilever’s WO 94/25591, WO 99/37681, WO 00/40968, WO 00/43507, WO 00/65057, WO 01/40310, WO 01/44301, EP 1134231 and WO 02/48193; WO 97/49805, WO 01/21817, WO 03/035694, WO 03/054016 and WO 03/055527 from Vlaams Instituut voor Biotechnologie (VIB), Belgium; WO 03/050531 to Algonomics NV and Ablynx NV; WO 01/90190 to the National Research Council of Canada; WO 03/025020 (= EP 1433793) to the Institute of Antibodies; and Ablynx NV WO 04/041867, WO 04/041862, WO 04/041865, WO 04/041863, WO 04/062551, WO 05/044858, WO 06/40153, WO 06/079372, WO 06/122786, WO 06/122787 and WO 06/122825.
通常,免疫球蛋白的生成涉及對實驗動物的免疫、免疫球蛋白產生細胞的融合以產生雜交瘤、以及篩選所需的特異性。可替代地,可以透過篩選天然或合成文庫(例如透過噬菌體展示)生成免疫球蛋白。Typically, immunoglobulin production involves immunization of experimental animals, fusion of immunoglobulin-producing cells to produce hybridomas, and screening for desired specificity. Alternatively, immunoglobulins can be generated by screening natural or synthetic libraries (eg, by phage display).
免疫球蛋白序列(如NANOBODY® ISVD)的生成已經廣泛描述於各種出版物中,其中WO 94/04678、Hamers-Casterman等人,1993以及Muyldermans等人,2001(綜述,Molecular Biotechnology 74: 277-302, 2001)可以作為例證。在這些方法中,用標靶抗原免疫駱駝科動物以誘導針對所述標靶抗原的免疫反應。將從所述免疫接種獲得的NANOBODY® ISVD的庫針對結合所述標靶抗原的ISVD進行進一步篩選。The generation of immunoglobulin sequences such as NANOBODY® ISVD has been extensively described in various publications, among them WO 94/04678, Hamers-Casterman et al., 1993, and Muyldermans et al., 2001 (reviewed in Molecular Biotechnology 74: 277-302 , 2001) can serve as an illustration. In these methods, a camelid is immunized with a target antigen to induce an immune response against the target antigen. The library of NANOBODY® ISVDs obtained from the immunizations is further screened for ISVDs that bind the target antigen.
在這些情況下,抗體的生成需要純化的抗原用於免疫和/或篩選。可以從天然來源或在重組產生過程中純化抗原。In these cases, antibody generation requires purified antigen for immunization and/or screening. Antigens can be purified from natural sources or during recombinant production.
免疫球蛋白序列的免疫和/或篩選可以使用此類抗原的肽片段進行。Immunization and/or screening of immunoglobulin sequences can be performed using peptide fragments of such antigens.
本發明可以使用不同來源的免疫球蛋白序列,包括小鼠、大鼠、兔、驢、人和駱駝科動物免疫球蛋白序列。本發明還包括完全人、人類化或嵌合序列。例如,本發明包括駱駝科動物免疫球蛋白序列和人類化駱駝科動物免疫球蛋白序列,或者駝類化結構域抗體,例如如由以下所述的駝類化dAb:Ward等人(參見例如WO 94/04678和Riechmann, Febs Lett., 339:285-290, 1994和Prot. Eng., 9:531-537, 1996)。此外,本發明還使用融合的免疫球蛋白序列,例如從而形成多價和/或多特異性構築體(對於含有一個或多個V HH結構域的多價和多特異性多肽及其製備,還參見Conrath等人,J. Biol. Chem., 第276卷, 10. 7346-7350, 2001,以及參見例如WO 96/34103和WO 99/23221);以及可從本發明的免疫球蛋白序列衍生的包含標籤或其他功能性部分(例如毒素、標記、放射性化學物質等)的免疫球蛋白序列。 Immunoglobulin sequences from various sources may be used in the present invention, including mouse, rat, rabbit, donkey, human and camelid immunoglobulin sequences. The invention also encompasses fully human, humanized or chimeric sequences. For example, the invention includes camelid immunoglobulin sequences and humanized camelid immunoglobulin sequences, or camelidized domain antibodies, such as camelidized dAbs as described by: Ward et al. (see, e.g., WO 94/04678 and Riechmann, Febs Lett., 339:285-290, 1994 and Prot. Eng., 9:531-537, 1996). In addition, the present invention also uses fused immunoglobulin sequences, for example to form multivalent and/or multispecific constructs (for multivalent and multispecific polypeptides containing one or more VHH domains and their preparation, also See Conrath et al., J. Biol. Chem., Vol. 276, 10. 7346-7350, 2001, and see, e.g., WO 96/34103 and WO 99/23221); and derivable from the immunoglobulin sequences of the invention Immunoglobulin sequences that contain tags or other functional moieties (e.g., toxins, labels, radioactive chemicals, etc.).
「人類化V HH」包含與天然存在的V HH結構域的胺基酸序列對應但是已經被「人類化」的胺基酸序列,即透過將所述天然存在的V HH序列(並且特別是架構序列)的胺基酸序列中的一個或多個胺基酸殘基用來自人類的常規4鏈抗體(例如,上文所示)的V H結構域中的一個或多個相應位置處存在的一個或多個胺基酸殘基替代而人類化。這能以本身已知的方式進行,這對於本領域具有通常知識者來說是清楚的,例如基於本文的進一步描述和現有技術(例如WO 2008/020079)。此外,應注意,可以以任何本身已知的合適方式獲得此類人類化V HH,並因此並不嚴格限於已經使用包含天然存在的VHH結構域作為起始材料的多肽獲得的多肽。 "Humanized VHH " includes an amino acid sequence corresponding to the amino acid sequence of a naturally occurring VHH domain but that has been "humanized", i.e., by converting said naturally occurring VHH sequence (and in particular the structure sequence), one or more amino acid residues in the amino acid sequence of a conventional 4-chain antibody from human (e.g., shown above) are present at one or more corresponding positions in the VH domain Humanized by substitution of one or more amino acid residues. This can be done in a manner known per se, as will be clear to a person of ordinary skill in the art, for example on the basis of the further description herein and the prior art (eg WO 2008/020079). Furthermore, it should be noted that such humanized VHHs may be obtained in any suitable manner known per se and are therefore not strictly limited to polypeptides that have been obtained using polypeptides comprising naturally occurring VHH domains as starting material.
「駝類化V H」包含與天然存在的V H結構域的胺基酸序列對應但是已經被「駝類化」的胺基酸序列,即透過將來自常規4鏈抗體的天然存在的V H結構域的胺基酸序列中的一個或多個胺基酸殘基用重鏈抗體的V HH結構域中的一個或多個相應位置處存在的一個或多個胺基酸殘基替代而駝類化。這能以本身已知的方式進行,這對於本領域具有通常知識者來說是清楚的,例如基於本文的進一步描述和現有技術(例如WO 2008/020079)。如本文所定義,此類「駝類化」取代優選地在V H-V L接合處形成和/或存在的胺基酸位置處插入和/或在所謂的駱駝科動物標誌殘基處插入,如本文所定義(參見例如WO 94/04678和Davies和Riechmann (1994和1996),同上)。優選地,用作用於生成或設計駝類化V H的起始材料或起點的V H序列優選地是來自哺乳動物的V H序列,更優選人的V H序列,如V H3序列。然而應注意,可以以任何本身已知的合適方式獲得此類駝類化V H,並因此並不嚴格限於已經使用包含天然存在的V H結構域作為起始材料的多肽獲得的多肽。 "Camelized VH " includes an amino acid sequence that corresponds to the amino acid sequence of a naturally occurring VH domain but has been "camelized", i.e., by combining naturally occurring VH from a conventional 4-chain antibody One or more amino acid residues in the amino acid sequence of the domain are replaced with one or more amino acid residues present at one or more corresponding positions in the VHH domain of the heavy chain antibody. Generalization. This can be done in a manner known per se, as will be clear to a person of ordinary skill in the art, for example on the basis of the further description herein and the prior art (eg WO 2008/020079). Such "camelized" substitutions, as defined herein, are preferably inserted at the amino acid positions formed and/or present at the VH - VL junction and/or at so-called camelid signature residues, As defined herein (see eg WO 94/04678 and Davies and Riechmann (1994 and 1996), supra). Preferably, the VH sequence used as starting material or starting point for generating or designing camelidized VHs is preferably a VH sequence from a mammal, more preferably a human VH sequence, such as a VH3 sequence. It should be noted, however, that such camelidized VHs may be obtained in any suitable manner known per se and are therefore not strictly limited to polypeptides that have been obtained using polypeptides comprising naturally occurring VH domains as starting material.
應注意,一個或多個免疫球蛋白序列可以彼此連接和/或與其他胺基酸序列連接(例如經由二硫橋),以提供也可以用於本發明的肽構築體(例如Fab'片段、F(ab')2片段、scFv構築體、「雙抗體」和其他多特異性構築體)。例如,參考Holliger和Hudson的綜述, Nat Biotechnol. 2005年9月;23(9):1126-36。通常,在多肽旨在用於投予至受試者(例如用於預防性、治療性和/或診斷性目的)時,其優選地包含在所述受試者中並非天然存在的免疫球蛋白序列。It should be noted that one or more immunoglobulin sequences can be linked to each other and/or to other amino acid sequences (e.g. via disulfide bridges) to provide peptide constructs (e.g. Fab' fragments, F(ab')2 fragments, scFv constructs, "diabodies" and other multispecific constructs). See, for example, the review by Holliger and Hudson, Nat Biotechnol. 2005 Sep;23(9):1126-36. Generally, where a polypeptide is intended for administration to a subject (eg for prophylactic, therapeutic and/or diagnostic purposes), it preferably comprises an immunoglobulin that is not naturally occurring in the subject. sequence.
免疫球蛋白單可變結構域序列的優選結構可以認為是由四個架構區(「FR」)構成,其在本領域和本文中分別稱為「架構區1」(「FR1」)、「架構區2」(「FR2」)、「架構區3」(「FR3」)和「架構區4」(「FR4」),所述架構區被三個互補決定區(「CDR」)打斷,所述三個互補決定區在本領域和本文中分別稱為「互補決定區1」(「CDR1」)、「互補決定區2」(「CDR2」)和「互補決定區3」(「CDR3」)。The preferred structure of an immunoglobulin single variable domain sequence can be considered to be composed of four framework regions ("FRs"), which are referred to in the art and herein as "architecture region 1" ("FR1"), "architecture region 1" ("FR1"), Region 2" ("FR2"), "Architectural Region 3" ("FR3") and "Architectural Region 4" ("FR4"), which are interrupted by three complementary decision regions ("CDRs"), so The three complementary determining regions are referred to in the art and herein as "complementary determining region 1" ("CDR1"), "complementary determining region 2" ("CDR2") and "complementary determining region 3" ("CDR3") respectively. .
如WO 08/020079(通過引用併入)的第58頁和第59頁的段落q) 中進一步描述的,免疫球蛋白單可變結構域的胺基酸殘基可以根據由Kabat等人(「Sequence of proteins of immunological interest」, US Public Health Services, NIH Bethesda, MD, 出版號91)給出的用於V H結構域的通用編號來編號,如在Riechmann和Muyldermans, 2000(J. Immunol. Methods 240 (1-2): 185-195;參見例如此出版物的圖2)的文章中應用於來自駱駝科動物的V HH結構域的。應注意,如本領域中對於V H結構域和V HH結構域所熟知的,每個CDR中胺基酸殘基的總數可以變化,並且可以不對應於由Kabat編號表示的胺基酸殘基的總數(也就是說,根據Kabat編號的一個或多個位置可能不會在實際序列中被佔用,或者實際序列可能含有比Kabat編號所允許的數量更多的胺基酸殘基)。這意味著,通常,根據Kabat的編號可以對應於或可以不對應於實際序列中胺基酸殘基的實際編號。V H結構域和V HH結構域中的胺基酸殘基總數通常在110至120,常常在112與115之間的範圍內。然而應注意,較小和較長的序列也可能適合於本文中描述的目的。 As further described in paragraph q) on pages 58 and 59 of WO 08/020079 (incorporated by reference), the amino acid residues of the immunoglobulin single variable domain can be determined according to the method described by Kabat et al. (" Sequence of proteins of immunological interest", US Public Health Services, NIH Bethesda, MD, Publication No. 91) are numbered according to the universal numbering used for VH domains, as in Riechmann and Muyldermans, 2000 (J. Immunol. Methods 240 (1-2): 185-195; see, for example, Figure 2 of this publication as applied to V HH domains from camelids. It should be noted that, as is well known in the art for VH domains and VHH domains, the total number of amino acid residues in each CDR can vary and may not correspond to the amino acid residues represented by Kabat numbering of the total number (that is, one or more positions according to Kabat numbering may not be occupied in the actual sequence, or the actual sequence may contain more amino acid residues than the number allowed by Kabat numbering). This means that, in general, the numbering according to Kabat may or may not correspond to the actual numbering of the amino acid residues in the actual sequence. The total number of amino acid residues in the VH domain and VHH domain typically ranges from 110 to 120, often ranging between 112 and 115. It should be noted, however, that smaller and longer sequences may also be suitable for the purposes described herein.
在本申請中,除非另有說明,否則CDR序列是根據如Kontermann和Dübel(編 2010, Antibody Engineering, 第2卷, Springer Verlag Heidelberg Berlin, Martin, 第3章, 第33-51頁)中所述的AbM編號確定的。根據此方法,FR1包含位置1-25處的胺基酸殘基,CDR1包含位置26-35處的胺基酸殘基,FR2包含位置36-49處的胺基酸,CDR2包含位置50-58處的胺基酸殘基,FR3包含位置59-94處的胺基酸殘基,CDR3包含位置95-102處的胺基酸殘基,並且FR4包含位置103-113處的胺基酸殘基。In this application, unless otherwise stated, CDR sequences are as described in Kontermann and Dübel (eds. 2010, Antibody Engineering, Vol. 2, Springer Verlag Heidelberg Berlin, Martin, Chapter 3, pp. 33-51) The AbM number is determined. According to this method, FR1 contains the amino acid residues at positions 1-25, CDR1 contains the amino acid residues at positions 26-35, FR2 contains the amino acid residues at positions 36-49, and CDR2 contains the amino acid residues at positions 50-58 FR3 contains the amino acid residues at positions 59-94, CDR3 contains the amino acid residues at positions 95-102, and FR4 contains the amino acid residues at positions 103-113 .
CDR區的確定也可以根據不同的方法進行。在根據Kabat的CDR確定中,免疫球蛋白單可變結構域的FR1包含位置1-30處的胺基酸殘基,免疫球蛋白單可變結構域的CDR1包含位置31-35處的胺基酸殘基,免疫球蛋白單可變結構域的FR2包含位置36-49處的胺基酸,免疫球蛋白單可變結構域的CDR2包含位置50-65處的胺基酸殘基,免疫球蛋白單可變結構域的FR3包含位置66-94處的胺基酸殘基,免疫球蛋白單可變結構域的CDR3包含位置95-102處的胺基酸殘基,並且免疫球蛋白單可變結構域的FR4包含位置103-113處的胺基酸殘基。The determination of CDR regions can also be carried out according to different methods. In the CDR determination according to Kabat, the FR1 of the immunoglobulin single variable domain contains the amino acid residues at positions 1-30, and the CDR1 of the immunoglobulin single variable domain contains the amino acid residues at positions 31-35 acid residues, the FR2 of the immunoglobulin single variable domain contains the amino acid residues at positions 36-49, the CDR2 of the immunoglobulin single variable domain contains the amino acid residues at positions 50-65, the immunoglobulin The FR3 of the protein single variable domain contains amino acid residues at positions 66-94, the CDR3 of the immunoglobulin single variable domain contains amino acid residues at positions 95-102, and the immunoglobulin monocan FR4 of the variable domain contains amino acid residues at positions 103-113.
在這種免疫球蛋白序列中,所述架構序列可以是任何合適的架構序列,並且例如基於標準手冊以及本文中提及的另外的披露內容和現有技術,合適的架構序列的例子對於具有通常知識者將是清楚的。In such immunoglobulin sequences, the architecture sequence may be any suitable architecture sequence, and examples of suitable architecture sequences are of common knowledge, for example based on standard manuals and additional disclosures and prior art mentioned herein. will be clear.
所述架構序列優選地是免疫球蛋白架構序列或者源自免疫球蛋白架構序列(例如,透過人類化或駝類化)的架構序列(的合適組合)。例如,所述架構序列可以是源自輕鏈可變結構域(例如V L序列)和/或重鏈可變結構域(例如V H序列或V HH序列)的架構序列。在一個特別優選的方面,所述架構序列是源自V HH序列的架構序列(其中所述架構序列可以任選地已部分或完全人類化)或已駝類化的常規V H序列(如本文所定義)。 The architecture sequence is preferably an immunoglobulin architecture sequence or (a suitable combination of) architecture sequences derived from an immunoglobulin architecture sequence (eg, by humanization or camelidization). For example, the framework sequence may be a framework sequence derived from a light chain variable domain (eg, a VL sequence) and/or a heavy chain variable domain (eg, a VH sequence or a VHH sequence). In a particularly preferred aspect, the architectural sequence is an architectural sequence derived from a VHH sequence (wherein the architectural sequence may optionally have been partially or fully humanized) or a conventional VH sequence that has been camelized (as herein defined).
特別地,本發明中使用的ISVD序列中存在的架構序列可以含有一個或多個標誌殘基(如本文所定義)以使得ISVD序列是NANOBODY®免疫球蛋白可變結構域,包括人類化V HH或駝類化V H。此類架構序列(的合適組合)的一些優選但非限制性的例子將從本文的進一步公開內容中變得清楚。 In particular, the architectural sequences present in ISVD sequences used in the present invention may contain one or more marker residues (as defined herein) such that the ISVD sequence is a NANOBODY® immunoglobulin variable domain, including humanized VHH Or camelized V H . Some preferred but non-limiting examples of (suitable combinations of) such architectural sequences will become clear from the further disclosure herein.
此外,如本文對於免疫球蛋白序列的一般性描述,也可以使用前述任何一種的合適片段(或片段的組合),如含有適當地側接一個或多個架構序列和/或經由一個或多個架構序列連接的一個或多個CDR序列的片段(例如,按照與這些CDR和架構序列可能在衍生所述片段的全尺寸免疫球蛋白序列中出現的相同順序)。Furthermore, as generally described herein for immunoglobulin sequences, suitable fragments (or combinations of fragments) of any of the foregoing may also be used, such as containing suitably flanked by one or more architectural sequences and/or via one or more A fragment of one or more CDR sequences to which the architecture sequence is linked (eg, in the same order in which these CDR and architecture sequences would appear in the full-size immunoglobulin sequence from which the fragment was derived).
然而,應注意,關於ISVD序列(或用於表現所述ISVD序列的核苷酸序列)的來源,以及關於生成或獲得(或者已經生成或獲得)所述ISVD序列或核苷酸序列的方式,本發明不受限。因此,所述ISVD序列可以是天然存在的序列(來自任何合適的物種)或合成或半合成序列。在特定但非限制性的方面,所述ISVD序列是天然存在的序列(來自任何合適的物種)或合成或半合成序列,包括但不限於「人類化」(如本文所定義)免疫球蛋白序列(如部分或完全人類化小鼠或兔疫球蛋白序列,並且特別是部分或完全人類化V HH序列),「駝類化」(如本文所定義)免疫球蛋白序列,以及已經透過技術(如親和力成熟(例如從合成的、隨機的或天然存在的免疫球蛋白序列開始)、CDR移植、面飾、組合源自不同免疫球蛋白序列的片段、使用重疊引子的PCR組裝、以及具有通常知識者熟知的工程化免疫球蛋白序列的類似技術)獲得的免疫球蛋白序列;或前述任何一種的任何合適組合。 It should be noted, however, that with respect to the origin of the ISVD sequence (or the nucleotide sequence used to represent said ISVD sequence), and with respect to the manner in which said ISVD sequence or nucleotide sequence is generated or obtained (or has been generated or obtained), The invention is not limited. Thus, the ISVD sequences may be naturally occurring sequences (from any suitable species) or synthetic or semi-synthetic sequences. In specific but non-limiting aspects, the ISVD sequences are naturally occurring sequences (from any suitable species) or synthetic or semi-synthetic sequences, including but not limited to "humanized" (as defined herein) immunoglobulin sequences (such as partially or fully humanized mouse or rabbit immunoglobulin sequences, and in particular partially or fully humanized V HH sequences), “camelized” (as defined herein) immunoglobulin sequences, and immunoglobulin sequences that have been modified by technology ( Such as affinity maturation (e.g. starting from synthetic, random or naturally occurring immunoglobulin sequences), CDR grafting, surface dressing, combining fragments derived from different immunoglobulin sequences, PCR assembly using overlapping primers, and general knowledge or any suitable combination of any of the foregoing.
類似地,核苷酸序列可以是天然存在的核苷酸序列或合成或半合成序列,並且可以例如是透過PCR從合適的天然存在的模板(例如,從細胞分離的DNA或RNA)分離的序列、已經從文庫(並且特別是表現文庫)分離的核苷酸序列、已經透過將突變引入天然存在的核苷酸序列中而製備(使用本身已知的任何合適技術,如錯配PCR)的核苷酸序列、已經使用重疊引子透過PCR製備的核苷酸序列或已經使用本身已知的DNA合成技術製備的核苷酸序列。Similarly, the nucleotide sequence may be a naturally occurring nucleotide sequence or a synthetic or semi-synthetic sequence, and may be, for example, a sequence isolated by PCR from a suitable naturally occurring template (eg, DNA or RNA isolated from a cell) , nucleotide sequences that have been isolated from libraries (and in particular expression libraries), nuclei that have been prepared by introducing mutations into naturally occurring nucleotide sequences (using any suitable technique known per se, such as mismatch PCR) A nucleotide sequence, a nucleotide sequence that has been prepared by PCR using overlapping primers, or a nucleotide sequence that has been prepared using DNA synthesis techniques known per se.
如上所述,ISVD可以是NANOBODY® V HH或其合適片段。對於NANOBODY® ISVD的一般性描述,參考下文的進一步描述以及本文引用的現有技術。然而,在這方面,應注意,此描述和現有技術主要描述了所謂的「V H3類」的NANOBODY® ISVD(即與V H3類的人種系序列如DP-47、DP-51或DP-29具有高度序列同源性的NANOBODY® ISVD)。然而,應注意,本發明在其最廣泛的意義上通常可以使用任何類型的NANOBODY® ISVD並且例如還使用屬於所謂的「V H4類」的NANOBODY® ISVD(即與V H4類的人種系序列如DP-78具有高度序列同源性的NANOBODY® ISVD),如例如WO 2007/118670中所述。 As mentioned above, the ISVD may be NANOBODY® V HH or a suitable fragment thereof. For a general description of NANOBODY® ISVD, reference is made to the further description below and to the prior art cited herein. In this regard, however, it should be noted that this description and the prior art primarily describe so-called " VH class 3" NANOBODY® ISVDs (i.e., human germline sequences with VH class 3 such as DP-47, DP-51 or DP-29 has high sequence homology to NANOBODY® ISVD). However, it should be noted that the present invention in its broadest sense can generally use any type of NANOBODY® ISVD and for example also use NANOBODY® ISVD belonging to the so-called "V H 4 category" (i.e. human race with the V H 4 category). NANOBODY® ISVDs with high sequence homology to sequences such as DP-78, as described for example in WO 2007/118670.
通常,NANOBODY® ISVD(特別是V HH序列,包括(部分)人類化V HH序列和駝類化V H序列)的特徵可以是在一個或多個架構序列(同樣如本文進一步所述)中存在一個或多個「標誌殘基(Hallmark residues)」(如本文所述)。因此,通常,NANOBODY® ISVD可以被定義為具有以下(一般)結構的免疫球蛋白序列: FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 其中FR1至FR4分別是指架構區1至4,並且其中CDR1至CDR3分別是指互補決定區1至3,並且其中標誌殘基中的一個或多個是如本文進一步所定義的。 In general, NANOBODY® ISVDs (particularly VHH sequences, including (parts of) humanized VHH sequences and camelidized VH sequences) may be characterized by the presence in one or more architectural sequences (also as further described herein) One or more "Hallmark residues" (as described herein). Therefore, in general, a NANOBODY® ISVD can be defined as an immunoglobulin sequence with the following (general) structure: FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 where FR1 to FR4 refer to architectural regions 1 to 4, respectively, and wherein CDR1 to CDR3 refer to complementarity determining regions 1 to 3 respectively, and wherein one or more of the marker residues are as further defined herein.
特別地,NANOBODY® ISVD可以是具有以下(一般)結構的免疫球蛋白序列: FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 其中FR1至FR4分別是指架構區1至4,並且其中CDR1至CDR3分別是指互補決定區1至3,並且其中所述架構序列是如本文進一步所定義的。 In particular, NANOBODY® ISVD can be an immunoglobulin sequence with the following (general) structure: FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 wherein FR1 to FR4 refer to architectural regions 1 to 4, respectively, and wherein CDR1 to CDR3 refer to complementarity determining regions 1 to 3, respectively, and wherein the architectural sequence is as further defined herein.
更特別地,NANOBODY® ISVD可以是具有以下(一般)結構的免疫球蛋白序列: FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 其中FR1至FR4分別是指架構區1至4,並且其中CDR1至CDR3分別是指互補決定區1至3,並且其中: 根據Kabat編號,在位置11、37、44、45、47、83、84、103、104和108處的胺基酸殘基中的一個或多個選自下 表 1中提及的標誌殘基。 More specifically, a NANOBODY® ISVD may be an immunoglobulin sequence with the following (general) structure: FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 where FR1 to FR4 refer to architectural regions 1 to 4 respectively, and where CDR1 to CDR3 refers respectively to complementarity determining regions 1 to 3, and where: one of the amino acid residues at positions 11, 37, 44, 45, 47, 83, 84, 103, 104 and 108 according to Kabat numbering or more selected from the marker residues mentioned in Table 1 below.
表 1 :NANOBODY® ISVD中的
標誌殘基
本發明技術尤其使用可與TCRαβ、CD33或CD123特異性地結合的ISVD。在本發明技術的情境中,與特定標靶分子「結合」在本領域中具有與在抗體及其相應抗原的情境中所理解的通常含義。The present technology specifically utilizes ISVDs that specifically bind to TCRαβ, CD33 or CD123. In the context of the present technology, "binding" to a specific target molecule has the usual meaning in the art as understood in the context of antibodies and their corresponding antigens.
本發明技術的多肽可以包含與TCRαβ特異性地結合的一個或多個ISVD、與CD33特異性地結合的一個或多個ISVD和與CD123特異性地結合的一個或多個ISVD。Polypeptides of the present technology may comprise one or more ISVDs that specifically bind to TCRαβ, one or more ISVDs that specifically bind to CD33, and one or more ISVDs that specifically bind to CD123.
本發明技術中使用的ISVD形成本技術多肽的一部分,所述多肽包含至少三個ISVD或由其組成,使得所述多肽可以特異性地結合TCRαβ、CD33和CD123。因此,所述多肽可以錨定在CD33+CD123+白血病幹細胞(LSC)和急性骨髓性白血病(AML)母細胞上,同時可與細胞毒性T細胞上的TCRαβ結合。透過這種方式,所述多肽使T細胞與LSC和AML胚細胞非常靠近。多肽與腫瘤細胞上的腫瘤抗原(CD33和CD123)的多重結合以及同時與單個T細胞上的TCR分子的結合導致TCR簇集並且最終導致T細胞啟動。在LSC和AML母細胞附近的T細胞啟動可導致有效的腫瘤細胞殺傷,從而在AML患者中產生治療功效。The ISVDs used in the present technology form part of a polypeptide of the present technology that contains or consists of at least three ISVDs such that the polypeptide can specifically bind TCRαβ, CD33, and CD123. Therefore, the polypeptide can be anchored on CD33+CD123+ leukemia stem cells (LSC) and acute myeloid leukemia (AML) blast cells, and can simultaneously bind to TCRαβ on cytotoxic T cells. In this way, the peptide brings T cells into close proximity with LSC and AML blasts. Multiple binding of polypeptides to tumor antigens (CD33 and CD123) on tumor cells and simultaneous binding to TCR molecules on individual T cells results in TCR clustering and ultimately T cell priming. T cell priming in the vicinity of LSCs and AML blasts leads to efficient tumor cell killing, resulting in therapeutic efficacy in AML patients.
因此,如在本發明技術的多肽中使用的所述至少三個ISVD的標靶分子是TCRαβ、CD33和CD123。例子是哺乳動物CD33、CD123和TCRαβ。儘管人TCRαβ(Uniprot登錄)、人CD33(Uniprot登錄)和人CD123(Uniprot登錄)是優選的,但是來自其他物種的形式(例如來自小鼠、大鼠、兔、貓、狗、山羊、綿羊、馬、豬、非人靈長類動物(如食蟹猴)(在本文中也稱為「 cyno」)、或駱駝科動物(如美洲駝或羊駝)的TCRαβ、CD33和CD123)也適用於本發明技術。 Accordingly, the target molecules of the at least three ISVDs as used in the polypeptides of the present technology are TCRαβ, CD33 and CD123. Examples are mammalian CD33, CD123 and TCRαβ. Although human TCRαβ (Uniprot accession), human CD33 (Uniprot accession) and human CD123 (Uniprot accession) are preferred, forms from other species (e.g. from mouse, rat, rabbit, cat, dog, goat, sheep, The TCRαβ, CD33, and CD123 of horses, pigs, nonhuman primates (such as cynomolgus monkeys) (also referred to herein as “ cynos ”), or camelids (such as llamas or alpacas) are also suitable for technology of the present invention.
可用於本發明技術的與TCRαβ、CD123和CD123特異性地結合的ISVD的具體例子如以下項A至C中所述:Specific examples of ISVDs that specifically bind to TCRαβ, CD123, and CD123 that may be used in the present technology are as described in Items A to C below:
A. 如下ISVD,其與人TCRαβ特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 6或與SEQ ID NO: 6具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 10或與SEQ ID NO: 10具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 14或與SEQ ID NO: 14具有2或1個胺基酸差異的胺基酸序列, 優選地,為具有SEQ ID NO: 6的胺基酸序列的CDR1、具有SEQ ID NO: 10的胺基酸序列的CDR2和具有SEQ ID NO: 14的胺基酸序列的CDR3。 A. The following ISVD, which specifically binds to human TCRαβ and contains i. CDR1, which contains SEQ ID NO: 6 or an amino acid sequence that differs from SEQ ID NO: 6 by 2 or 1 amino acid; ii. CDR2 comprising SEQ ID NO: 10 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 10; and iii. CDR3 comprising SEQ ID NO: 14 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 14, Preferably, it is CDR1 having the amino acid sequence of SEQ ID NO: 6, CDR2 having the amino acid sequence of SEQ ID NO: 10 and CDR3 having the amino acid sequence of SEQ ID NO: 14.
這樣的與人TCRαβ特異性地結合的ISVD的優選例子具有如表A-2中針對TCRαβ -V HH所表示的一個或多個(並且優選地所有)架構區(以及如前述項A中所定義的CDR),並且最優選地是具有TCRαβ -V HH的完整胺基酸序列(SEQ ID NO: 2;參見表A-1和表A-2)的ISVD。 Preferred examples of such ISVDs that specifically bind to human TCRαβ have one or more (and preferably all) architectural regions as represented in Table A-2 for TCRαβ-V HH (and as defined in the preceding item A CDR), and most preferably an ISVD having the complete amino acid sequence of TCRαβ- VHH (SEQ ID NO: 2; see Table A-1 and Table A-2).
此外,在優選的實施例中,與人TCRαβ特異性地結合的ISVD的胺基酸序列可以與SEQ ID NO: 2具有大於90%(如大於95%或大於99%)的序列同一性,其中任選地所述CDR如前述項A中所定義。特別地,與TCRαβ特異性地結合的ISVD優選地具有SEQ ID NO: 2的胺基酸序列。Furthermore, in a preferred embodiment, the amino acid sequence of the ISVD that specifically binds to human TCRαβ may have greater than 90% (such as greater than 95% or greater than 99%) sequence identity with SEQ ID NO: 2, wherein Optionally the CDRs are as defined in item A above. In particular, the ISVD that specifically binds to TCRαβ preferably has the amino acid sequence of SEQ ID NO: 2.
當這種與TCRαβ特異性地結合的ISVD在至少一個CDR中具有相對於相應參考CDR序列的2或1個胺基酸差異(上文項A)時,與TCRαβ -V HH(SEQ ID NO: 2)相比,所述ISVD對人TCRαβ優選地具有至少一半的結合親和力,更優選地至少相同的結合親和力,其中所述結合親和力是使用相同的方法(如SPR)測量的。 When such an ISVD that specifically binds to TCRαβ has a 2 or 1 amino acid difference relative to the corresponding reference CDR sequence in at least one CDR (item A above), it is compatible with TCRαβ-V HH (SEQ ID NO: 2) The ISVD preferably has at least half the binding affinity to human TCRαβ, more preferably at least the same binding affinity, where the binding affinity is measured using the same method (such as SPR).
B. 如下ISVD,其與人CD33特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 7或與SEQ ID NO: 7具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 11或與SEQ ID NO: 11具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 15或與SEQ ID NO: 15具有2或1個胺基酸差異的胺基酸序列, 優選地,為具有SEQ ID NO: 7的胺基酸序列的CDR1、具有SEQ ID NO: 11的胺基酸序列的CDR2和具有SEQ ID NO: 15的胺基酸序列的CDR3。 B. The following ISVD, which specifically binds to human CD33 and contains i. CDR1, which contains SEQ ID NO: 7 or an amino acid sequence that differs from SEQ ID NO: 7 by 2 or 1 amino acid; ii. CDR2 comprising SEQ ID NO: 11 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 11; and iii. CDR3 comprising SEQ ID NO: 15 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 15, Preferably, it is CDR1 having the amino acid sequence of SEQ ID NO: 7, CDR2 having the amino acid sequence of SEQ ID NO: 11 and CDR3 having the amino acid sequence of SEQ ID NO: 15.
這種與人CD33特異性地結合的ISVD的優選例子具有如表A-2中針對CD33-V HH所表示的一個或多個(並且優選地所有)架構區(以及如先前項B中所定義的CDR),並且最優選地是具有CD33-V HH的完整胺基酸序列(SEQ ID NO: 3,參見表A-1和A-2)的ISVD。 Preferred examples of such ISVDs that specifically bind to human CD33 have one or more (and preferably all) architectural regions as represented in Table A-2 for CD33-V HH (and as previously defined in Item B CDR), and most preferably an ISVD having the complete amino acid sequence of CD33-V HH (SEQ ID NO: 3, see Tables A-1 and A-2).
此外,在優選的實施例中,與人CD33特異性地結合的ISVD的胺基酸序列可以與SEQ ID NO: 3具有大於90%(如大於95%或大於99%)的序列同一性,其中任選地所述CDR如前述項B中所定義。特別地,與CD33特異性地結合的ISVD優選地具有SEQ ID NO: 3的胺基酸序列。Furthermore, in a preferred embodiment, the amino acid sequence of the ISVD that specifically binds to human CD33 may have greater than 90% (such as greater than 95% or greater than 99%) sequence identity with SEQ ID NO: 3, wherein Optionally the CDRs are as defined in item B above. In particular, the ISVD that specifically binds to CD33 preferably has the amino acid sequence of SEQ ID NO: 3.
當這種與CD33特異性地結合的ISVD在至少一個CDR中具有相對於相應參考CDR序列的2或1個胺基酸差異(上文項B)時,與構築體CD33-V HH(SEQ ID NO: 3)相比,所述ISVD對人CD33優選地具有至少一半的結合親和力,更優選地至少相同的結合親和力,其中所述結合親和力是使用相同的方法(如SPR)測量的。 When such an ISVD that specifically binds to CD33 has a 2 or 1 amino acid difference relative to the corresponding reference CDR sequence in at least one CDR (item B above), it is consistent with construct CD33-V HH (SEQ ID NO: 3) The ISVD preferably has at least half the binding affinity to human CD33, more preferably at least the same binding affinity, wherein the binding affinity is measured using the same method (such as SPR).
C. 如下ISVD,其與人CD123特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 8或與SEQ ID NO: 8具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 12或與SEQ ID NO: 12具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 16或與SEQ ID NO: 16具有2或1個胺基酸差異的胺基酸序列, 優選地,為具有SEQ ID NO: 8的胺基酸序列的CDR1、具有SEQ ID NO: 12的胺基酸序列的CDR2和具有SEQ ID NO: 16的胺基酸序列的CDR3。 C. The following ISVD, which specifically binds to human CD123 and contains i. CDR1, which contains SEQ ID NO: 8 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 8; ii. CDR2 comprising SEQ ID NO: 12 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 12; and iii. CDR3 comprising SEQ ID NO: 16 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 16, Preferably, it is CDR1 having the amino acid sequence of SEQ ID NO: 8, CDR2 having the amino acid sequence of SEQ ID NO: 12 and CDR3 having the amino acid sequence of SEQ ID NO: 16.
這種與人CD123特異性地結合的ISVD的優選例子具有如表A-2中針對CD123-V HH所表示的一個或多個(並且優選地所有)架構區(以及如先前項C中所定義的CDR),並且最優選地是具有CD123-V HH的完整胺基酸序列(SEQ ID NO: 4,參見表A-1和A-2)的ISVD。 Preferred examples of such ISVDs that specifically bind to human CD123 have one or more (and preferably all) architectural regions as represented in Table A-2 for CD123-V HH (and as previously defined in Item C CDR), and most preferably an ISVD having the complete amino acid sequence of CD123-V HH (SEQ ID NO: 4, see Tables A-1 and A-2).
此外,在優選的實施例中,與人CD123特異性地結合的ISVD的胺基酸序列可以與SEQ ID NO: 4具有大於90%(如大於95%或大於99%)的序列同一性,其中任選地所述CDR如前述項C中所定義。特別地,與CD123結合的ISVD優選地具有SEQ ID NO: 4的胺基酸序列。Furthermore, in a preferred embodiment, the amino acid sequence of the ISVD that specifically binds to human CD123 may have greater than 90% (such as greater than 95% or greater than 99%) sequence identity with SEQ ID NO: 4, wherein Optionally the CDRs are as defined in item C above. In particular, the ISVD that binds to CD123 preferably has the amino acid sequence of SEQ ID NO: 4.
當這種與CD123特異性地結合的ISVD在至少一個CDR中具有相對於相應參考CDR序列的2或1個胺基酸差異(上文項C)時,與CD123-V HH(SEQ ID NO: 4)相比,所述ISVD對人CD123優選地具有至少一半的結合親和力,更優選地至少相同的結合親和力,其中所述結合親和力是使用相同的方法(如SPR)測量的。 When such an ISVD that specifically binds to CD123 has 2 or 1 amino acid difference relative to the corresponding reference CDR sequence in at least one CDR (item C above), it is consistent with CD123-V HH (SEQ ID NO: 4) The ISVD preferably has at least half the binding affinity for human CD123, more preferably at least the same binding affinity, where the binding affinity is measured using the same method (such as SPR).
優選地,如在上文項A至項C下所定義的ISVD中的每一個包含於本發明的多肽中。與由SEQ ID NO: 1的胺基酸組成的多肽相比,這樣的包含如在上文項A至項C下所定義的ISVD中的每一個的本發明的多肽對人TCRαβ、對人CD33和對人CD123優選地具有至少一半的結合親和力,更優選地至少相同的結合親和力,其中所述結合親和力是使用相同方法(如SPR)測量的。Preferably, each of the ISVDs as defined under items A to C above is comprised in the polypeptide of the invention. Compared to a polypeptide consisting of the amino acid of SEQ ID NO: 1, such a polypeptide of the present invention comprising each of the ISVDs as defined under items A to C above is effective for human TCRαβ, for human CD33 and to human CD123 preferably have at least half the binding affinity, more preferably at least the same binding affinity, where the binding affinity is measured using the same method (eg SPR).
上述項A至C中提及的SEQ ID NO是基於根據AbM定義的CDR定義(參見表A-2)。注意,根據Kabat定義(參見表A-2.1)定義相同CDR的SEQ ID NO同樣可以用於上述項A至C。The SEQ ID NOs mentioned in items A to C above are based on the CDR definitions defined according to AbM (see Table A-2). Note that SEQ ID NOs defining the same CDR according to the Kabat definition (see Table A-2.1) can also be used for the above items A to C.
因此,可以如上所述使用AbM定義在本發明中使用的與TCRαβ、CD33或CD123特異性地結合的特定ISVD也可以如以下項A’至C’中所述使用Kabat定義進行描述:Therefore, specific ISVDs that specifically bind to TCRαβ, CD33 or CD123 for use in the present invention can be described using the AbM definition as described above or using the Kabat definition as described in items A' to C' below:
A’. 如下ISVD,其與人TCRαβ特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 34或與SEQ ID NO: 34具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 38或與SEQ ID NO: 38具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 42或與SEQ ID NO: 42具有2或1個胺基酸差異的胺基酸序列, 優選地,為具有SEQ ID NO: 34的胺基酸序列的CDR1、具有SEQ ID NO: 38的胺基酸序列的CDR2和具有SEQ ID NO: 42的胺基酸序列的CDR3。 A’. The following ISVD, which specifically binds to human TCRαβ and contains i. CDR1, which contains SEQ ID NO: 34 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 34; ii. CDR2 comprising SEQ ID NO: 38 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 38; and iii. CDR3 comprising SEQ ID NO: 42 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 42, Preferably, it is CDR1 having the amino acid sequence of SEQ ID NO: 34, CDR2 having the amino acid sequence of SEQ ID NO: 38 and CDR3 having the amino acid sequence of SEQ ID NO: 42.
這樣的與人TCRαβ特異性地結合的ISVD的優選例子具有如表A-2.1中針對TCRαβ-V HH所表示的一個或多個(並且優選地所有)架構區(以及如前述項A’中所定義的CDR),並且最優選地是具有TCRαβ-V HH的完整胺基酸序列(SEQ ID NO: 2;參見表A-1和表A-2.1)的ISVD。 Preferred examples of such ISVDs that specifically bind to human TCRαβ have one or more (and preferably all) architectural regions as represented in Table A-2.1 for TCRαβ-V HH (and as described in the preceding item A' defined CDR), and most preferably an ISVD having the complete amino acid sequence of TCRαβ- VHH (SEQ ID NO: 2; see Table A-1 and Table A-2.1).
B’. 如下ISVD,其與人CD33特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 35或與SEQ ID NO: 35具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 39或與SEQ ID NO: 39具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 43或與SEQ ID NO: 43具有2或1個胺基酸差異的胺基酸序列, 優選地,為具有SEQ ID NO: 35的胺基酸序列的CDR1、具有SEQ ID NO: 39的胺基酸序列的CDR2和具有SEQ ID NO: 43的胺基酸序列的CDR3。 B’. The following ISVD, which specifically binds to human CD33 and contains i. CDR1, which contains SEQ ID NO: 35 or an amino acid sequence that differs from SEQ ID NO: 35 by 2 or 1 amino acid; ii. CDR2 comprising SEQ ID NO: 39 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 39; and iii. CDR3 comprising SEQ ID NO: 43 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 43, Preferably, it is CDR1 having the amino acid sequence of SEQ ID NO: 35, CDR2 having the amino acid sequence of SEQ ID NO: 39 and CDR3 having the amino acid sequence of SEQ ID NO: 43.
這種與人CD33特異性地結合的ISVD的優選例子具有如表A-2.1中針對CD33-V HH所表示的一個或多個(並且優選地所有)架構區(以及如先前項B’中所定義的CDR),並且最優選地是具有CD33-V HH的完整胺基酸序列(SEQ ID NO: 3,參見表A-1和A-2.1)的ISVD。 Preferred examples of such ISVDs that specifically bind to human CD33 have one or more (and preferably all) architectural regions as represented in Table A-2.1 for CD33-V HH (and as previously represented in item B' defined CDR), and most preferably an ISVD having the complete amino acid sequence of CD33-V HH (SEQ ID NO: 3, see Tables A-1 and A-2.1).
C’. 如下ISVD,其與人CD123特異性地結合並且包含 i. CDR1,其包含SEQ ID NO: 36或與SEQ ID NO: 36具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 40或與SEQ ID NO: 40具有2或1個胺基酸差異的胺基酸序列;和 iii. CDR3,其包含SEQ ID NO: 44或與SEQ ID NO: 44具有2或1個胺基酸差異的胺基酸序列, 優選地,為具有SEQ ID NO: 36的胺基酸序列的CDR1、具有SEQ ID NO: 40的胺基酸序列的CDR2和具有SEQ ID NO: 44的胺基酸序列的CDR3。 C’. The following ISVD, which specifically binds to human CD123 and contains i. CDR1, which contains SEQ ID NO: 36 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 36; ii. CDR2 comprising SEQ ID NO: 40 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 40; and iii. CDR3 comprising SEQ ID NO: 44 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 44, Preferably, it is CDR1 having the amino acid sequence of SEQ ID NO: 36, CDR2 having the amino acid sequence of SEQ ID NO: 40 and CDR3 having the amino acid sequence of SEQ ID NO: 44.
這種與人CD123特異性地結合的ISVD的優選例子具有如表A-2.1中針對CD123-V HH所表示的一個或多個(並且優選地所有)架構區(以及如先前項C’中所定義的CDR),並且最優選地是具有CD123-V HH的完整胺基酸序列(SEQ ID NO: 4,參見表A-1和A-2.1)的ISVD。 Preferred examples of such ISVDs that specifically bind to human CD123 have one or more (and preferably all) architectural regions as represented in Table A-2.1 for CD123-V HH (and as previously represented in item C' defined CDR), and most preferably an ISVD with the complete amino acid sequence of CD123-V HH (SEQ ID NO: 4, see Tables A-1 and A-2.1).
第一胺基酸序列與第二胺基酸序列之間的「 序列同一性」的百分比可以如下進行計算:([ 第一胺基酸序列中胺基酸殘基與第二胺基酸序列中相應位置處的胺基酸殘基相同的數量]/[ 第一胺基酸序列中胺基酸殘基的總數量])× 100%,其中與第一胺基酸序列相比,在第二胺基酸序列中胺基酸殘基的每個缺失、插入、取代或添加被視為單個胺基酸殘基處(即單個位置處)的差異。 The percentage of " sequence identity " between the first amino acid sequence and the second amino acid sequence can be calculated as follows: ([ The amino acid residues in the first amino acid sequence and the amino acid residues in the second amino acid sequence The same number of amino acid residues at the corresponding positions ]/[ the total number of amino acid residues in the first amino acid sequence ]) × 100% , where compared with the first amino acid sequence, in the second Each deletion, insertion, substitution, or addition of an amino acid residue in an amino acid sequence is considered a difference at a single amino acid residue (ie, at a single position).
通常,為了根據上文概述的計算方法確定兩個胺基酸序列之間的「序列同一性」的百分比,將具有最大胺基酸殘基數量的胺基酸序列作為「第一」胺基酸序列,並且另一個胺基酸序列作為「第二」胺基酸序列。Typically, to determine the percentage of "sequence identity" between two amino acid sequences according to the calculation method outlined above, the amino acid sequence with the greatest number of amino acid residues is considered the "first" amino acid sequence, and another amino acid sequence as the "second" amino acid sequence.
如本文所用,「胺基酸差異」是指單個胺基酸殘基相對於參考序列的缺失、插入或取代,並且優選地是取代。As used herein, "amino acid difference" refers to the deletion, insertion or substitution, and preferably substitution, of a single amino acid residue relative to a reference sequence.
胺基酸取代優選地是保守取代。此類保守取代優選是指這樣的取代,其中下組 (a) - (e)中的一個胺基酸被同一組中的另一個胺基酸殘基取代:(a) 小脂肪族、非極性或弱極性殘基:Ala、Ser、Thr、Pro和Gly;(b) 極性、帶負電荷的殘基及其(不帶電荷的)醯胺:Asp、Asn、Glu和Gln;(c) 極性、帶正電荷的殘基:His、Arg和Lys;(d) 大脂肪族、非極性殘基:Met、Leu、Ile、Val和Cys;和 (e) 芳香族殘基:Phe、Tyr和Trp。Amino acid substitutions are preferably conservative substitutions. Such conservative substitutions preferably refer to substitutions in which one amino acid of the following groups (a) - (e) is replaced by another amino acid residue of the same group: (a) Small aliphatic, non-polar or weakly polar residues: Ala, Ser, Thr, Pro and Gly; (b) polar, negatively charged residues and their (uncharged) amides: Asp, Asn, Glu and Gln; (c) polarity , positively charged residues: His, Arg, and Lys; (d) large aliphatic, nonpolar residues: Met, Leu, Ile, Val, and Cys; and (e) aromatic residues: Phe, Tyr, and Trp .
特別優選的保守取代如下:Ala取代為Gly或取代為Ser;Arg取代為Lys;Asn取代為Gln或取代為His;Asp取代為Glu;Cys取代為Ser;Gln取代為Asn;Glu取代為Asp;Gly取代為Ala或取代為Pro;His取代為Asn或取代為Gln;Ile取代為Leu或取代為Val;Leu取代為Ile或取代為Val;Lys取代為Arg、取代為Gln或取代為Glu;Met取代為Leu、取代為Tyr或取代為Ile;Phe取代為Met、取代為Leu或取代為Tyr;Ser取代為Thr;Thr取代為Ser;Trp取代為Tyr;Tyr取代為Trp;和/或Phe取代為Val、取代為Ile或取代為Leu。Particularly preferred conservative substitutions are as follows: Ala is replaced by Gly or replaced by Ser; Arg is replaced by Lys; Asn is replaced by Gln or replaced by His; Asp is replaced by Glu; Cys is replaced by Ser; Gln is replaced by Asn; Glu is replaced by Asp; Gly is replaced by Ala or replaced by Pro; His is replaced by Asn or replaced by Gln; Ile is replaced by Leu or replaced by Val; Leu is replaced by Ile or replaced by Val; Lys is replaced by Arg, replaced by Gln or replaced by Glu; Met Substituted for Leu, substituted for Tyr or substituted for Ile; Phe substituted for Met, substituted for Leu or substituted for Tyr; Ser substituted for Thr; Thr substituted for Ser; Trp substituted for Tyr; Tyr substituted for Trp; and/or Phe substituted is Val, replaced by Ile or replaced by Leu.
5.25.2 特異性specificity
術語「 特異性」、「 特異性地結合」或「 特異性結合」是指特定結合單元(如ISVD)可以以足夠高的親和力(參見下文)結合的來自同一生物的不同標靶分子(如抗原)的數量。「 特異性」、「 特異性地結合」或「 特異性結合」在本文中與「 選擇性」、「 選擇性地結合」或「 選擇性結合」可互換使用。結合單元如ISVD優選地與其指定標靶特異性地結合。 The term " specificity ", " specifically binds " or " specifically binds " means that a specific binding unit (e.g. ISVD) can bind with sufficiently high affinity (see below) to different target molecules (e.g. antigens) from the same organism. ) quantity. " Specificity ,"" specifically binds " or " specifically binds " are used interchangeably herein with " selective ,"" selectively binds " or " selectively binds ." A binding unit such as ISVD preferably specifically binds to its designated target.
可以基於親和力確定結合單元的特異性/選擇性。親和力表示分子相互作用的強度或穩定性。親和力通常通過KD或解離常數給出,包括mol/L(或M)的單位。親和力也可以表示為締合常數KA,其等於1/KD並且單位為 (mol/L) -1(或M -1)。 The specificity/selectivity of the binding unit can be determined based on affinity. Affinity represents the strength or stability of molecular interactions. Affinity is usually given by KD or dissociation constant, including units of mol/L (or M). Affinity can also be expressed as the association constant KA, which is equal to 1/KD and has units (mol/L) -1 (or M -1 ).
親和力是部分與標靶分子上的結合位點之間的結合強度的量度:KD值越小,標靶分子與靶向部分之間的結合強度越強。Affinity is a measure of the strength of the binding between the moiety and the binding site on the target molecule: the smaller the KD value, the stronger the binding between the target molecule and the targeting moiety.
通常,本發明技術中使用的結合單元(如ISVD)將以10 -5至10 -12mol/L或更低、並且優選10 -7至10 -12mol/L或更低、並且更優選10 -8至10 -12mol/L的解離常數(KD)(即以10 5至10 12L/mol或更高、並且優選10 7至10 12L/mol或更高、並且更優選10 8至10 12L/mol的締合常數(KA))與其標靶結合。 Typically, the binding units (such as ISVD) used in the present technology will be from 10 -5 to 10 -12 mol/L or less, and preferably from 10 -7 to 10 -12 mol/L or less, and more preferably 10 A dissociation constant (KD) of -8 to 10 -12 mol/L (i.e., 10 5 to 10 12 L/mol or higher, and preferably 10 7 to 10 12 L/mol or higher, and more preferably 10 8 to Association constant (KA) of 10 12 L/mol) binds to its target.
通常認為任何大於10 -4mol/L的KD值(或任何小於10 4L/mol的KA值)表示非特異性結合。 It is generally accepted that any KD value greater than 10 −4 mol/L (or any KA value less than 10 4 L/mol) indicates nonspecific binding.
被認為具有特異性的生物學相互作用(如免疫球蛋白序列與抗原的結合)的KD通常在10 -5mol/L(10000 nM或10 µM)至10 -12mol/L(0.001 nM或1 pM)或更小的範圍內。 The KD for a biological interaction considered specific (such as the binding of an immunoglobulin sequence to an antigen) is typically between 10 -5 mol/L (10000 nM or 10 µM) and 10 -12 mol/L (0.001 nM or 1 pM) or less.
因此,特異性/選擇性結合可能意味著,使用相同的測量方法例如SPR,結合單元(或包含其的多肽)以10 -5至10 -12莫耳/公升或更低的KD值與TCRαβ、CD33和/或CD123結合,並且以大於10 -4莫耳/公升的KD值與相關標靶結合。 Thus , specific/selective binding may mean that the binding unit (or polypeptide containing the same) binds to TCRαβ , TCRαβ, CD33 and/or CD123 bind and bind to the relevant target with a KD value greater than 10 -4 mol/liter.
因此,與由SEQ ID NO: 1的胺基酸組成的多肽相比,本發明技術的多肽對人TCRαβ、對人CD33和對人CD123優選地具有至少一半的結合親和力,更優選地至少相同的結合親和力,其中所述結合親和力是使用相同的方法(如SPR)測量的。Therefore, compared with the polypeptide composed of the amino acids of SEQ ID NO: 1, the polypeptide of the present technology preferably has at least half the binding affinity to human TCRαβ, human CD33 and human CD123, and more preferably at least the same Binding affinity, where the binding affinity is measured using the same method (eg, SPR).
與來自特定物種的特定標靶的特異性結合並不排除結合單元也可以與來自不同物種的類似標靶特異性地結合。例如,與人TCRαβ特異性結合不排除結合單元(或包含所述結合單元的多肽)也可以與來自食蟹猴的TCRαβ特異性地結合。同樣,例如,與人CD33或CD123特異性結合不排除結合單元(或包含所述結合單元的多肽)也可以與來自食蟹猴(「cyno」)的CD33或CD123特異性地結合。Specific binding to a specific target from a specific species does not exclude that the binding unit may also specifically bind to a similar target from a different species. For example, specific binding to human TCRαβ does not exclude that the binding unit (or a polypeptide comprising the binding unit) may also specifically bind to TCRαβ from cynomolgus monkey. Likewise, for example, specific binding to human CD33 or CD123 does not exclude that a binding unit (or a polypeptide comprising said binding unit) may also specifically bind to CD33 or CD123 from cynomolgus monkey ("cyno").
結合單元與其指定標靶的特異性結合可以透過本身已知的任何合適方式(包括例如斯卡查德(Scatchard)分析和/或競爭性結合測定(如放射免疫測定(RIA)、酶免疫測定(EIA)和夾心式競爭測定)和本領域本身已知的其不同變異體);以及本文提及的其他技術來確定。Specific binding of a binding unit to its designated target may be achieved by any suitable means known per se, including, for example, Scatchard analysis and/or competitive binding assays such as radioimmunoassays (RIA), enzyme immunoassays ( EIA) and sandwich competition assays) and different variants thereof known per se in the art); as well as other techniques mentioned herein.
解離常數可以是實際或表觀解離常數,正如具有通常知識者所清楚的。確定解離常數的方法對具有通常知識者是清楚的,並且例如包括以下提及的技術。在這一方面,還將清楚的是,可能無法測量大於10 -4mol/L或10 -3mol/L(例如為10 -2mol/L)的解離常數。任選地,如具有通常知識者也清楚的,(實際或表觀)解離常數可以基於(實際或表觀)締合常數(KA)通過關係[KD = 1/KA]來計算。 The dissociation constant may be an actual or apparent dissociation constant, as will be apparent to one of ordinary skill. Methods of determining dissociation constants will be clear to those of ordinary skill and include, for example, the techniques mentioned below. In this regard, it will also be clear that it may not be possible to measure dissociation constants greater than 10 −4 mol/L or 10 −3 mol/L (eg 10 −2 mol/L). Optionally, as will also be clear to a person of ordinary skill, the (actual or apparent) dissociation constant can be calculated based on the (actual or apparent) association constant (KA) by the relationship [KD = 1/KA].
可以經由本身已知的不同技術(如熟知的表面等離子體共振(SPR)生物感測器技術(參見例如,Ober等人 2001, Intern. Immunology 13: 1551-1559))來測量兩個分子之間的分子相互作用的親和力。如本文所用,術語「表面等離子體共振」是指光學現象,其允許透過檢測生物感測器基質中蛋白質濃度的改變來分析即時生物特異性相互作用,其中一個分子被固定在生物感測器晶片上,並且另一個分子在流動條件下通過所固定的分子,從而產生k on、k off測量值,並因此產生K D(或K A)值。例如,這可以使用熟知的BIAcore®系統(BIAcore International AB,一家GE Healthcare公司,烏普薩拉,瑞典和皮斯卡塔韋,新澤西州)進行。有關進一步描述,參見Jonsson等人(1993, Ann. Biol. Clin. 51: 19-26)、Jonsson等人(1991 Biotechniques 11: 620-627)、Johnsson等人(1995, J. Mol. Recognit. 8: 125-131)和Johnnson等人(1991, Anal. Biochem. 198: 268-277)。 The distance between two molecules can be measured via different techniques known per se, such as the well-known surface plasmon resonance (SPR) biosensor technology (see, eg, Ober et al. 2001, Intern. Immunology 13: 1551-1559) affinity of molecular interactions. As used herein, the term "surface plasmon resonance" refers to an optical phenomenon that allows the analysis of real-time biospecific interactions by detecting changes in protein concentration in a biosensor matrix in which a molecule is immobilized on a biosensor chip. on, and another molecule passes through the immobilized molecule under flow conditions, producing kon , koff measurements, and therefore the KD (or KA ) value. This can be done, for example, using the well-known BIAcore® system (BIAcore International AB, a GE Healthcare company, Uppsala, Sweden and Piscataway, NJ). For further description, see Jonsson et al. (1993, Ann. Biol. Clin. 51: 19-26), Jonsson et al. (1991 Biotechniques 11: 620-627), Johnsson et al. (1995, J. Mol. Recognit. 8) : 125-131) and Johnson et al. (1991, Anal. Biochem. 198: 268-277).
另一種確定生物分子相互作用的親和力的熟知的生物感測器技術是生物層干涉測量法(BLI)(參見例如,Abdiche等人 2008, Anal. Biochem. 377: 209-217)。如本文所用,術語「生物層干涉法」或「BLI」是指無標籤光學技術,其分析從兩個表面反射的光的干涉圖案:內部參考層(參考光束)和生物感測器尖端上的固定蛋白質的層(信號光束)。與生物感測器尖端結合的分子的數量變化導致干涉圖案的偏移,報告為波長偏移(nm),其大小是與生物感測器尖端表面結合的分子的數量的直接量度。由於可以即時測量相互作用,因此可以確定締合和解離速率以及親和力。例如,BLI可以使用熟知的Octet®系統(ForteBio, Pall Life Sciences的部門,門洛派克,美國)進行。Another well-known biosensor technique for determining the affinity of biomolecular interactions is biolayer interferometry (BLI) (see, e.g., Abdiche et al. 2008, Anal. Biochem. 377: 209-217). As used herein, the term "biolayer interferometry" or "BLI" refers to a label-free optical technique that analyzes the interference pattern of light reflected from two surfaces: an internal reference layer (reference beam) and a biosensor tip. Immobilized protein layer (signal beam). Changes in the number of molecules bound to the biosensor tip cause a shift in the interference pattern, reported as wavelength shift (nm), the size of which is a direct measure of the number of molecules bound to the biosensor tip surface. Since interactions can be measured instantaneously, association and dissociation rates as well as affinity can be determined. For example, BLI can be performed using the well-known Octet® system (ForteBio, a division of Pall Life Sciences, Menlo Pike, USA).
可替代地,可以在動力學排斥測定(KinExA)(參見例如Drake等人 2004, Anal. Biochem., 328: 35-43)中使用KinExA®平臺(Sapidyne Instruments Inc, 博伊西, 美國)測量親和力。如本文所用,術語「KinExA」是指用於測量未修飾分子的真實平衡結合親和力和動力學的基於溶液的方法。使抗體/抗原複合物的平衡溶液通過具有用抗原(或抗體)預塗佈的珠的柱,從而允許游離的抗體(或抗原)與被塗佈的分子結合。用結合抗體(或抗原)的螢光標記的蛋白完成了對如此捕獲的抗體(或抗原)的檢測。Alternatively, affinity can be measured in a kinetic exclusion assay (KinExA) (see, e.g., Drake et al. 2004, Anal. Biochem., 328: 35-43) using the KinExA® platform (Sapidyne Instruments Inc, Boise, USA). As used herein, the term "KinExA" refers to a solution-based method for measuring true equilibrium binding affinity and kinetics of unmodified molecules. An equilibrated solution of antibody/antigen complexes is passed through a column with beads pre-coated with antigen (or antibody), allowing free antibody (or antigen) to bind to the coated molecules. Detection of the antibody (or antigen) so captured is accomplished with a fluorescently labeled protein that binds the antibody (or antigen).
GYROLAB®免疫測定系統為自動化生物分析和快速樣品周轉提供了平臺(Fraley等人 2013, Bioanalysis 5: 1765-74)。The GYROLAB® Immunoassay System provides a platform for automated bioanalysis and rapid sample turnaround (Fraley et al. 2013, Bioanalysis 5: 1765-74).
5.35.3 (( 體內inside the body )) 半衰期延長half-life extension
所述多肽還可以包含任選地經由一個或多個肽連接子連接的一個或多個其他基團、殘基、部分或結合單元,其中與沒有所述一個或多個其他基團、殘基、部分或結合單元的相應多肽相比,所述一個或多個其他基團、殘基、部分或結合單元為所述多肽提供了增加的(體內)半衰期。體內半衰期延長意指例如所述多肽在投予後在哺乳動物如人受試者中的半衰期增加。半衰期可以表示為例如t1/2β。The polypeptide may also comprise one or more other groups, residues, moieties or binding units, optionally linked via one or more peptide linkers, wherein the polypeptide is identical to the absence of the one or more other groups, residues The one or more other groups, residues, moieties or binding units provide the polypeptide with an increased (in vivo) half-life compared to the corresponding polypeptide. Prolonged half-life in vivo means, for example, an increase in the half-life of the polypeptide in a mammal, such as a human subject, following administration. The half-life can be expressed, for example, as t1/2β.
基團、殘基、部分或結合單元的類型通常不受限制並且可以例如選自聚乙二醇分子、血清蛋白或其片段、可與血清蛋白結合的結合單元、Fc部分和可與血清蛋白結合的小蛋白質或肽所組成的群組。The type of group, residue, moiety or binding unit is generally not limited and may, for example, be selected from polyethylene glycol molecules, serum proteins or fragments thereof, binding units that bind to serum proteins, Fc portions and those that bind to serum proteins. A group of small proteins or peptides.
更具體地,使所述多肽的半衰期增加的所述一個或多個其他基團、殘基、部分或結合單元可以選自可與血清白蛋白(如人血清白蛋白)或血清免疫球蛋白(如IgG)結合的結合單元所組成的群組,並且優選地是可與人血清白蛋白結合的結合單元。所述結合單元優選地是ISVD。More specifically, the one or more other groups, residues, moieties or binding units that increase the half-life of the polypeptide may be selected from the group consisting of those that are compatible with serum albumin (e.g., human serum albumin) or serum immunoglobulin ( A group consisting of binding units that bind, such as IgG), and preferably are binding units that can bind to human serum albumin. The binding unit is preferably ISVD.
例如,WO 04/041865描述了與血清白蛋白結合(並且特別是針對人血清白蛋白)的NANOBODY® ISVD,其可以與其他蛋白質(如與所需標靶結合的一種或多種其他NANOBODY® ISVD)連接以增加所述蛋白質的半衰期。For example, WO 04/041865 describes NANOBODY® ISVDs that bind to serum albumin (and specifically to human serum albumin), which may be combined with other proteins (such as one or more other NANOBODY® ISVDs that bind to the desired target) Linked to increase the half-life of the protein.
國際申請WO 06/122787描述了針對(人)血清白蛋白的多種NANOBODY® ISVD。這些NANOBODY® ISVD包括稱為Alb-1的NANOBODY® ISVD(WO 06/122787中的SEQ ID NO: 52)及其人類化變異體,如Alb-8(WO 06/122787中的SEQ ID NO: 62)。此外,這些可用於延長治療性蛋白質和多肽以及其他治療性實體或部分的半衰期。International application WO 06/122787 describes various NANOBODY® ISVDs against (human) serum albumin. These NANOBODY® ISVDs include the NANOBODY® ISVD known as Alb-1 (SEQ ID NO: 52 in WO 06/122787) and its humanized variants, such as Alb-8 (SEQ ID NO: 62 in WO 06/122787 ). Additionally, these can be used to extend the half-life of therapeutic proteins and peptides as well as other therapeutic entities or moieties.
此外,WO 2012/175400描述了Alb-1的另外的改善形式,稱為Alb-23。Furthermore, WO 2012/175400 describes an additional improved form of Alb-1, called Alb-23.
在優選實施例中,所述多肽包含選自以下的血清白蛋白結合部分:Alb-1、Alb-3、Alb-4、Alb-5、Alb-6、Alb-7、Alb-8、Alb-9、Alb-10和Alb-23,優選Alb-8或Alb-23或其變異體,如WO2012/175400的第7至9頁所示;以及WO2012/175741、WO2015/173325、WO2017/080850、WO2017/085172、WO2018/104444、WO2018/134235、WO2018/134234中所述的白蛋白結合劑。表A-4也顯示了一些優選的血清白蛋白結合劑中。本發明技術的多肽的特別優選的另外的組分是如項C中所述的:In a preferred embodiment, the polypeptide comprises a serum albumin binding portion selected from: Alb-1, Alb-3, Alb-4, Alb-5, Alb-6, Alb-7, Alb-8, Alb- 9. Alb-10 and Alb-23, preferably Alb-8 or Alb-23 or variants thereof, as shown on pages 7 to 9 of WO2012/175400; and WO2012/175741, WO2015/173325, WO2017/080850, WO2017 /085172, WO2018/104444, WO2018/134235, and albumin binding agents described in WO2018/134234. Table A-4 also shows some preferred serum albumin binding agents. Particularly preferred additional components of the polypeptides of the present technology are as described in item C:
C. 如下ISVD,其與人血清白蛋白結合並且包含 i. CDR1,其包含SEQ ID NO: 9或與SEQ ID NO: 9具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 13或與SEQ ID NO: 13具有2或1個胺基酸差異的胺基酸序列;以及 iii. CDR3,其包含SEQ ID NO: 17或與SEQ ID NO: 17具有2或1個胺基酸差異的胺基酸序列; 優選地含有SEQ ID NO: 9的胺基酸序列的CDR1、含有SEQ ID NO: 13的胺基酸序列的CDR2和含有SEQ ID NO: 17的胺基酸序列的CDR3。 C. The following ISVD, which binds to human serum albumin and contains i. CDR1, which contains SEQ ID NO: 9 or an amino acid sequence with 2 or 1 amino acid difference from SEQ ID NO: 9; ii. CDR2 comprising SEQ ID NO: 13 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 13; and iii. CDR3, which includes SEQ ID NO: 17 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 17; Preferably, CDR1 contains the amino acid sequence of SEQ ID NO: 9, CDR2 contains the amino acid sequence of SEQ ID NO: 13 and CDR3 contains the amino acid sequence of SEQ ID NO: 17.
這種與人血清白蛋白結合的ISVD的優選例子具有如表A-2中針對構築體ALB23002所表示的一個或多個(並且優選地所有)架構區(以及如先前項C中所定義的CDR),並且最優選地是包含構築體ALB23002的完整胺基酸序列(SEQ ID NO: 5,參見表A-1和A-2)的ISVD。Preferred examples of such ISVDs that bind human serum albumin have one or more (and preferably all) architectural regions as represented in Table A-2 for construct ALB23002 (and CDRs as previously defined in Item C ), and most preferably an ISVD containing the complete amino acid sequence of construct ALB23002 (SEQ ID NO: 5, see Tables A-1 and A-2).
也可以使用Kabat定義將項C描述為:Item C can also be described using the Kabat definition as:
C’. 如下ISVD,其與人血清白蛋白結合並且包含 i. CDR1,其包含SEQ ID NO: 37或與SEQ ID NO: 37具有2或1個胺基酸差異的胺基酸序列; ii. CDR2,其包含SEQ ID NO: 41或與SEQ ID NO: 41具有2或1個胺基酸差異的胺基酸序列;以及 iii. CDR3,其包含SEQ ID NO: 45或與SEQ ID NO: 45具有2或1個胺基酸差異的胺基酸序列; 優選地含有SEQ ID NO: 37的胺基酸序列的CDR1、含有SEQ ID NO: 41的胺基酸序列的CDR2和含有SEQ ID NO: 45的胺基酸序列的CDR3。 C’. The following ISVD, which binds to human serum albumin and contains i. CDR1, which contains SEQ ID NO: 37 or an amino acid sequence that differs from SEQ ID NO: 37 by 2 or 1 amino acid; ii. CDR2 comprising SEQ ID NO: 41 or an amino acid sequence that differs by 2 or 1 amino acid from SEQ ID NO: 41; and iii. CDR3, which includes SEQ ID NO: 45 or an amino acid sequence that differs from SEQ ID NO: 45 by 2 or 1 amino acid; Preferably, CDR1 contains the amino acid sequence of SEQ ID NO: 37, CDR2 contains the amino acid sequence of SEQ ID NO: 41 and CDR3 contains the amino acid sequence of SEQ ID NO: 45.
這種與人血清白蛋白結合的ISVD的優選例子具有如表A-2.1中針對構築體ALB23002所表示的一個或多個(並且優選地所有)架構區(以及如先前項C'中所定義的CDR),並且最優選地是包含構築體ALB23002的完整胺基酸序列(SEQ ID NO: 5,參見表A-1和A-2.1)的ISVD。Preferred examples of such ISVDs that bind human serum albumin have one or more (and preferably all) architectural regions as represented in Table A-2.1 for construct ALB23002 (and as previously defined in item C' CDR), and most preferably an ISVD containing the complete amino acid sequence of construct ALB23002 (SEQ ID NO: 5, see Tables A-1 and A-2.1).
同樣在優選實施例中,與人血清白蛋白結合的ISVD的胺基酸序列可以與SEQ ID NO: 5具有大於90%(如大於95%或大於99%)的序列同一性,其中任選地所述CDR如前述項C中所定義。特別地,與人血清白蛋白結合的ISVD優選地包含SEQ ID NO: 5的胺基酸序列。Also in preferred embodiments, the amino acid sequence of the ISVD that binds to human serum albumin may have greater than 90% (such as greater than 95% or greater than 99%) sequence identity with SEQ ID NO: 5, wherein optionally The CDR is as defined in item C above. In particular, the ISVD that binds to human serum albumin preferably contains the amino acid sequence of SEQ ID NO: 5.
在這種與人血清白蛋白結合的ISVD在至少一個CDR中具有相對於相應參考CDR序列的2或1個胺基酸差異(上文項C)時,與SEQ ID NO: 5中所示的構築體ALB23002相比,所述ISVD對人血清白蛋白具有至少一半的結合親和力,優選地至少相同的結合親和力,其中所述結合親和力是使用相同的方法(如SPR)測量的。When such an ISVD that binds to human serum albumin has 2 or 1 amino acid difference relative to the corresponding reference CDR sequence in at least one CDR (item C above), it is identical to that shown in SEQ ID NO: 5 The ISVD has at least half the binding affinity for human serum albumin compared to construct ALB23002, preferably at least the same binding affinity, where the binding affinity is measured using the same method (such as SPR).
在優選的實施例中,當與人血清白蛋白結合的這種ISVD具有C末端位置時,其展現出C末端丙胺酸(A)或甘胺酸(G)延伸並且優選地選自SEQ ID NO: 64、65、67、69、70、71、72、73、74和75(參見下表A-4)。如果與人血清白蛋白結合的ISVD具有不同於C末端位置的另一位置(即不是本發明技術的多肽的C末端ISVD)並且選自SEQ ID NO: 5、62、63、66和68(參見下表A-4)。In a preferred embodiment, when such ISVD has a C-terminal position that binds to human serum albumin, it exhibits a C-terminal alanine (A) or glycine (G) extension and is preferably selected from SEQ ID NO. : 64, 65, 67, 69, 70, 71, 72, 73, 74 and 75 (see Table A-4 below). If the ISVD that binds to human serum albumin has another position than the C-terminal position (i.e., is not the C-terminal ISVD of the polypeptide of the present technology) and is selected from the group consisting of SEQ ID NOs: 5, 62, 63, 66 and 68 (see Table A-4 below).
5.45.4 核酸分子nucleic acid molecules
還提供了編碼本發明技術的多肽的核酸分子。Nucleic acid molecules encoding polypeptides of the present technology are also provided.
「核酸分子」(與「核酸」可互換使用)是經由磷酸骨架彼此連接以形成核苷酸序列的核苷酸單體鏈。核酸可以用於轉化/轉染宿主細胞或宿主生物,例如以表現和/或產生多肽。用於產生目的的合適宿主或宿主細胞對本領域具有通常知識者將是清楚的,並且可以是例如任何合適的真菌、原核或真核細胞或細胞株或任何合適的真菌、原核或真核生物。包含編碼本發明技術的多肽的核酸的宿主或宿主細胞也被本發明技術涵蓋。A "nucleic acid molecule" (used interchangeably with "nucleic acid") is a chain of nucleotide monomers linked to each other via a phosphate backbone to form a nucleotide sequence. Nucleic acids can be used to transform/transfect host cells or host organisms, for example, to express and/or produce polypeptides. Suitable hosts or host cells for production purposes will be clear to those of ordinary skill in the art and may be, for example, any suitable fungal, prokaryotic or eukaryotic cell or cell strain or any suitable fungal, prokaryotic or eukaryotic organism. Hosts or host cells containing nucleic acids encoding polypeptides of the present technology are also encompassed by the present technology.
核酸可以是例如DNA、RNA或其雜合體,並且還可以包含(例如化學地)修飾的核苷酸,像PNA。其可以是單鏈或雙鏈的,並且優選地呈雙鏈DNA的形式。例如,本發明技術的核苷酸序列可以是基因體DNA、cDNA。The nucleic acid may be, for example, DNA, RNA, or hybrids thereof, and may also contain (eg, chemically) modified nucleotides, like PNA. It may be single-stranded or double-stranded, and is preferably in the form of double-stranded DNA. For example, the nucleotide sequence of the present technology may be genomic DNA or cDNA.
本發明技術的核酸可以以本身已知的方式製備或獲得,和/或可以從合適的天然來源分離。編碼天然存在的(多)肽的核苷酸序列可以例如經受定點誘變,以提供編碼具有序列變異的多肽的核酸分子。另外,對於本領域具有通常知識者來說清楚的是,為了製備核酸,還可以將若干種核苷酸序列(如編碼靶向部分的至少一種核苷酸序列)和例如編碼一種或多種連接子的核酸以合適的方式連接在一起。Nucleic acids of the present technology may be prepared or obtained in a manner known per se, and/or may be isolated from suitable natural sources. Nucleotide sequences encoding naturally occurring (poly)peptides can, for example, be subjected to site-directed mutagenesis to provide nucleic acid molecules encoding polypeptides with sequence variations. In addition, it will be clear to one of ordinary skill in the art that, in order to prepare a nucleic acid, it is also possible to combine several nucleotide sequences (eg, at least one nucleotide sequence encoding a targeting moiety) and, for example, encoding one or more linkers. The nucleic acids are linked together in a suitable manner.
生成核酸的技術對於具有通常知識者將是清楚的,並且可以例如包括但不限於自動化DNA合成;定點誘變;將兩個或更多個天然存在的和/或合成序列(或其兩個或更多個部分)組合,引入可導致截短的表現產物的表現的突變;引入一個或多個限制位點(例如,以使用合適的限制酶產生容易被消化和/或連接的盒和/或區域),和/或使用一種或多種「錯配」引子通過PCR反應引入突變。Techniques for generating nucleic acids will be clear to those of ordinary skill and may include, for example, but are not limited to, automated DNA synthesis; site-directed mutagenesis; combining two or more naturally occurring and/or synthetic sequences (or two or More parts) are combined to introduce mutations that result in the expression of a truncated expression product; to introduce one or more restriction sites (e.g., to create a cassette that can be easily digested and/or ligated using appropriate restriction enzymes and/or region), and/or introduce mutations via PCR reactions using one or more "mismatch" primers.
5.55.5 載體carrier
還提供了包含編碼本發明技術的多肽的核酸分子的載體。如本文所用的載體是適合於將遺傳物質攜帶至細胞中的媒介物。載體包括裸核酸(如質體或mRNA)或嵌入更大結構(如脂質體或病毒載體)中的核酸。Vectors comprising nucleic acid molecules encoding polypeptides of the present technology are also provided. A vector as used herein is a vehicle suitable for carrying genetic material into a cell. Vectors include naked nucleic acids (such as plasmids or mRNA) or nucleic acids embedded in larger structures (such as liposomes or viral vectors).
載體通常包含任選地與一種或多種調節元件(例如像一種或多種合適的啟動子、增強子、終止子等)連接的至少一種核酸。載體優選地是表現載體,即適合於在合適條件下(例如當所述載體被引入(例如人)細胞中時)表現編碼的多肽或構築體的載體。對於基於DNA的載體,這通常包括用於轉錄(例如啟動子和聚A信號)和轉譯(例如Kozak序列)的元件的存在。Vectors typically comprise at least one nucleic acid optionally linked to one or more regulatory elements (eg, like one or more suitable promoters, enhancers, terminators, etc.). The vector is preferably an expression vector, ie a vector suitable for expressing the encoded polypeptide or construct under suitable conditions, eg when the vector is introduced into (eg human) cells. For DNA-based vectors, this typically includes the presence of elements for transcription (eg promoters and polyA signals) and translation (eg Kozak sequences).
優選地,在所述載體中,所述至少一種核酸和所述調節元件彼此「可操作地連接」,這通常意指它們彼此處於功能關係。例如,如果啟動子能夠啟動或以其他方式控制/調節編碼序列的轉錄和/或表現,則所述啟動子被認為與編碼序列「可操作地連接」(其中所述編碼序列應理解為在所述啟動子的「控制下」)。通常,當兩個核苷酸序列可操作地連接時,它們將在相同的方向上並且通常也在相同的閱讀框中。它們通常也基本上是連續的,儘管這也可能不是必需的。Preferably, in said vector, said at least one nucleic acid and said regulatory element are "operably linked" to each other, which generally means that they are in a functional relationship with each other. For example, a promoter is said to be "operably linked" to a coding sequence if it is capable of initiating or otherwise controlling/regulating the transcription and/or expression of the coding sequence (wherein the coding sequence is understood to be "under the control of" the promoter mentioned above). Generally, when two nucleotide sequences are operably linked, they will be in the same orientation and usually also in the same reading frame. They are also usually essentially continuous, although this may not be required.
優選地,所述載體的任何調節元件使得它們能夠在預期的宿主細胞或宿主生物中提供其預期的生物學功能。Preferably, any regulatory elements of the vectors enable them to provide their intended biological function in the intended host cell or host organism.
例如,啟動子、增強子或終止子在預期的宿主細胞或宿主生物中應是「可操作的」,這意味著例如所述啟動子應能夠啟動或以其他方式控制/調節與其可操作地連接的核苷酸序列(例如編碼序列)的轉錄和/或表現。For example, a promoter, enhancer or terminator should be "operable" in the intended host cell or host organism, which means, for example, that the promoter should be able to initiate or otherwise control/regulate operably linked to it Transcription and/or expression of nucleotide sequences (e.g., coding sequences).
5.65.6 組成物Composition
本發明技術還提供了一種組成物,其包含至少一種本發明技術的多肽、編碼本發明技術的多肽的至少一種核酸分子或含有這種核酸分子的至少一種載體。所述組成物可以是醫藥組成物。所述組成物還可以包含至少一種醫藥上可接受的載劑、稀釋劑或賦形劑和/或佐劑,並且任選地包含一種或多種另外的醫藥活性多肽和/或化合物。The technology of the present invention also provides a composition comprising at least one polypeptide of the present technology, at least one nucleic acid molecule encoding the polypeptide of the present technology, or at least one vector containing such a nucleic acid molecule. The composition may be a pharmaceutical composition. The composition may further comprise at least one pharmaceutically acceptable carrier, diluent or excipient and/or adjuvant, and optionally one or more additional pharmaceutically active polypeptides and/or compounds.
5.75.7 宿主生物host organism
本發明技術還涉及宿主細胞或宿主生物,所述宿主細胞或宿主生物包含本發明技術的多肽、編碼本發明技術的多肽的核酸和/或含有編碼本發明技術的多肽的核酸分子的載體。The present technology also relates to a host cell or host organism comprising a polypeptide of the present technology, a nucleic acid encoding a polypeptide of the present technology, and/or a vector containing a nucleic acid molecule encoding a polypeptide of the present technology.
合適的宿主細胞或宿主生物對本領域具有通常知識者將是清楚的,並且是例如任何合適的真菌、原核或真核細胞或細胞株或任何合適的真菌、原核或真核生物。具體例子包括HEK293細胞、CHO細胞、大腸桿菌或巴斯德畢赤酵母。最優選的宿主是巴斯德畢赤酵母。Suitable host cells or host organisms will be clear to one of ordinary skill in the art and are, for example, any suitable fungal, prokaryotic or eukaryotic cell or cell strain or any suitable fungal, prokaryotic or eukaryotic organism. Specific examples include HEK293 cells, CHO cells, Escherichia coli or Pichia pastoris. The most preferred host is Pichia pastoris.
5.85.8 多肽的方法和用途Methods and uses of peptides
本發明技術還提供了用於產生本發明技術的多肽的方法。所述方法可以包括用編碼所述多肽的核酸轉化/轉染宿主細胞或宿主生物、在所述宿主中表現所述多肽、任選地接著進行一個或多個分離和/或純化步驟。具體地,所述方法可以包括: a) 在合適的宿主細胞或宿主生物中或在另一種合適的表現系統中表現編碼所述多肽的核酸序列;任選地接著是: b) 分離和/或純化所述多肽。 The present technology also provides methods for producing the polypeptides of the present technology. The method may comprise transforming/transfecting a host cell or host organism with a nucleic acid encoding the polypeptide, expressing the polypeptide in the host, optionally followed by one or more isolation and/or purification steps. Specifically, the method may include: a) Express the nucleic acid sequence encoding the polypeptide in a suitable host cell or host organism or in another suitable expression system; optionally followed by: b) Isolate and/or purify the polypeptide.
用於產生目的的合適的宿主細胞或宿主生物對本領域具有通常知識者將是清楚的,並且可以是例如任何合適的真菌、原核或真核細胞或細胞株或任何合適的真菌、原核或真核生物。具體例子包括HEK293細胞、CHO細胞、大腸桿菌或巴斯德畢赤酵母。最優選的宿主是巴斯德畢赤酵母。Suitable host cells or host organisms for production purposes will be clear to those of ordinary skill in the art and may be, for example, any suitable fungal, prokaryotic or eukaryotic cell or cell strain or any suitable fungal, prokaryotic or eukaryotic biology. Specific examples include HEK293 cells, CHO cells, Escherichia coli or Pichia pastoris. The most preferred host is Pichia pastoris.
本發明技術的多肽、如所述的核酸分子或載體、或者包含本發明技術的多肽、核酸分子或載體的組成物,優選地所述多肽或包含所述多肽的組成物,可用作藥物。The polypeptide of the technology of the present invention, the nucleic acid molecule or vector as described, or the composition containing the polypeptide, nucleic acid molecule or vector of the technology of the present invention, preferably the polypeptide or the composition containing the polypeptide, can be used as a medicine.
因此,本發明技術提供了用作藥物的本發明技術的多肽、如本文所述的核酸分子或載體或包含本發明技術的多肽、核酸分子或載體的組成物。Accordingly, the present technology provides a polypeptide of the present technology, a nucleic acid molecule or a vector as described herein, or a composition comprising a polypeptide, nucleic acid molecule or vector of the present technology for use as a medicament.
還提供了本發明技術的多肽、如所述的核酸分子或載體、或者包含本發明技術的多肽、核酸分子或載體的組成物,其用於(預防性或治療性)治療急性骨髓性白血病(AML)(優選復發性和/或難治性AML)。Also provided are polypeptides of the technology of the present invention, nucleic acid molecules or vectors as described, or compositions comprising polypeptides of the technology of the present invention, nucleic acid molecules or vectors, for (preventive or therapeutic) treatment of acute myeloid leukemia ( AML) (preferably relapsed and/or refractory AML).
進一步提供了一種治療AML的(預防性和/或治療性)方法,其中所述方法包括向有需要的受試者投予醫藥活性量的本發明技術的多肽、如所述的核酸分子或載體、或包含本發明技術的多肽、核酸分子或載體的組成物。Further provided is a (preventive and/or therapeutic) method of treating AML, wherein the method comprises administering to a subject in need a pharmaceutically active amount of a polypeptide of the present technology, a nucleic acid molecule or a vector as described , or a composition comprising a polypeptide, nucleic acid molecule or vector of the technology of the present invention.
進一步提供了本發明技術的多肽、如所述的核酸分子或載體或者包含本發明技術的多肽、核酸分子或載體的組成物在製備優選用於治療AML的醫藥組成物中的用途。Further provided are the use of polypeptides of the technology of the present invention, nucleic acid molecules or vectors as described, or compositions comprising polypeptides of the technology of the present invention, nucleic acid molecules or vectors, in the preparation of pharmaceutical compositions preferably used to treat AML.
所述AML可以是復發性和/或難治性AML。The AML may be relapsed and/or refractory AML.
如在本發明技術的上下文中所提及的「受試者」可以是任何動物,優選哺乳動物。在哺乳動物中,可以將人和非人哺乳動物區分開。非人動物可以是例如伴侶動物(例如狗、貓)、家畜(例如牛、馬、綿羊、山羊或豬動物)或通常用於研究目的和/或用於產生抗體的動物(例如小鼠、大鼠、兔、貓、狗、山羊、綿羊、馬、豬、非人靈長類動物(如食蟹猴)或駱駝科動物(如美洲駝或羊駝))。A "subject" as mentioned in the context of the present technology may be any animal, preferably a mammal. Among mammals, humans and non-human mammals can be distinguished. Non-human animals may be, for example, companion animals (e.g., dogs, cats), domestic animals (e.g., bovine, equine, ovine, goat, or porcine animals) or animals commonly used for research purposes and/or for the production of antibodies (e.g., mice, rats, etc. Rat, rabbit, cat, dog, goat, sheep, horse, pig, non-human primate (such as cynomolgus monkey) or camelid (such as llama or alpaca)).
在預防性和/或治療性目的的情境下,受試者可以是任何動物,並且更具體地是任何哺乳動物,但優選地是人受試者。In the context of prophylactic and/or therapeutic purposes, the subject may be any animal, and more particularly any mammal, but is preferably a human subject.
可以將物質(包括多肽、核酸分子和載體)或組成物透過任何合適的投予途徑投予受試者,所述合適的投予途徑例如通過腸內(如口服或直腸)或腸胃外(如表皮、舌下、頰、鼻、關節內、皮內、肌內、腹膜內、靜脈內、皮下、經皮、或經黏膜)投予。腸胃外投予,如肌內、皮下或皮內投予是優選的。最優選的是皮下投予。Substances (including polypeptides, nucleic acid molecules and vectors) or compositions may be administered to a subject by any suitable route of administration, such as enterally (e.g., orally or rectally) or parenterally (e.g., Epidermal, sublingual, buccal, nasal, intraarticular, intradermal, intramuscular, intraperitoneal, intravenous, subcutaneous, transdermal, or transmucosal) administration. Parenteral administration, such as intramuscular, subcutaneous or intradermal administration is preferred. Most preferred is subcutaneous administration.
可將有效量的多肽、如本文所述的核酸分子或載體或包含所述多肽、核酸分子或載體的組成物投予受試者,以提供預期的治療結果。An effective amount of a polypeptide, nucleic acid molecule, or vector as described herein, or a composition comprising the polypeptide, nucleic acid molecule, or vector, can be administered to a subject to provide the desired therapeutic result.
可以投予一個或多個劑量。如果投予多於一個劑量,則可以以合適的間隔投予劑量,以使所述多肽、組成物、核酸分子或載體的作用最大化。One or more doses can be administered. If more than one dose is administered, the doses may be administered at appropriate intervals to maximize the effect of the polypeptide, composition, nucleic acid molecule, or vector.
表surface
A-1A-1
:在四價多肽: In tetravalent polypeptide
A025001562A025001562
((
TCR-CD33-CD123TCR-CD33-CD123
多特異性multispecific
ISVDISVD
構築體construct
))
內鑒定的不同單價Different unit prices for internal appraisals
V
HH
VHH
構築塊的胺基酸序列Amino Acid Sequences of Building Blocks
((
「「
IDID
」"
是指如本文所用的means as used in this article
SEQ ID NOSEQ ID NO
))
表surface
A-2A-2
:根據:according to
AbMikB
編號的numbered
CDRCDR
和架構的序列and sequence of architectures
((
「「
IDID
」"
是指給出的refers to the given
SEQ ID NOSEQ ID NO
))
表surface
A-2.1A-2.1
:根據:according to
KabatKabat
編號的numbered
CDRCDR
和架構的序列and sequence of architectures
((
「「
IDID
」"
是指給出的refers to the given
SEQ ID NOSEQ ID NO
))
表surface
A-3A-3
:選擇的多價多肽的胺基酸序列: Amino acid sequence of the selected multivalent polypeptide
((
「「
IDID
」"
是指給出的refers to the given
SEQ ID NOSEQ ID NO
))
表surface
A-4A-4
:結合血清白蛋白的: Bound to serum albumin
ISVDISVD
序列sequence
((
「「
IDID
」"
是指如本文所用的means as used in this article
SEQ ID NOSEQ ID NO
))
表surface
A-5A-5
:連接子序列: Connector sequence
((
「「
IDID
」"
是指如本文所用的means as used in this article
SEQ ID NOSEQ ID NO
))
66 實例Example
6.16.1 實例Example 11 :多特異性:Multiple specificity ISVDISVD 構築體生成construct generation
多特異性NANOBODY® ISVD蛋白在巴斯德畢赤酵母(P. pastoris)中表現酵母表現載體含有AOX1啟動子和終止子、吉歐黴素抗性基因以及釀酒酵母(Saccharomyces cerevisiae)α-交配因子信號肽的編碼資訊。將NANOBODY® ISVD單價構築塊(BB)與GS連接子組合,並且經由金門克隆(Golden Gate cloning)轉殖到表現載體中(Engler C, Marillonnet S. Golden Gate cloning. Methods Mol Biol. 2014;1116:119-31)。表現載體含有兩個BpiI限制性位點,用於轉殖包含於一個或多個載體中的經PCR擴增的單價NANOBODY® ISVD構築塊以及GS連接子。所有這些元件均側接BpiI位點。在克隆盒的每個位置使用獨特的核苷酸突出端允許按預定順序無縫連接。Sanger序列確認後,將源自大腸桿菌(E. coli)TOP10的質體DNA線性化,並且透過電穿孔轉化到內部製備的高潛能(hypercompetent)巴斯德畢赤酵母菌株NRRL Y-11430(ATCC 76273)中。Multispecific NANOBODY® ISVD protein expressed in P. pastoris Yeast expression vector contains AOX1 promoter and terminator, giomycin resistance gene, and Saccharomyces cerevisiae alpha-mating factor Coding information for signal peptides. NANOBODY® ISVD monovalent building blocks (BB) were combined with the GS linker and transformed into expression vectors via Golden Gate cloning (Engler C, Marillonnet S. Golden Gate cloning. Methods Mol Biol. 2014;1116: 119-31). Expression vectors contain two BpiI restriction sites for transduction of PCR-amplified monovalent NANOBODY® ISVD building blocks and GS linkers contained in one or more vectors. All these elements are flanked by BpiI sites. The use of unique nucleotide overhangs at each position of the cloning cassette allows for seamless ligation in a predetermined sequence. After Sanger sequence confirmation, plasmid DNA derived from E. coli TOP10 was linearized and transformed by electroporation into the in-house prepared hypercompetent Pichia pastoris strain NRRL Y-11430 (ATCC 76273).
使含有NANOBODY ®ISVD蛋白表現載體的大腸桿菌TG1細胞(Lucigen,目錄號60502)在37ºC下生長2小時,然後在含有「5052」自動誘導培養基的帶擋板搖瓶中在30ºC(250 rpm)下生長29小時。透過離心(20分鐘,4500 rpm,4ºC)將細胞沈澱,棄去上清液,並且將沈澱物在-20ºC下冷凍過夜。然後將冷凍的細胞沈澱物以原始培養體積的1/12.5溶解於DPBS中,並且在4ºC下培育1小時同時輕輕旋轉,以破壞細胞的外膜。將細胞再次沈澱(20分鐘,8500 rpm,4ºC),並且將含有NANOBODY ®ISVD蛋白的上清液收集並過濾以立即進行純化。 E. coli TG1 cells (Lucigen, Cat. No. 60502) containing the NANOBODY ® ISVD protein expression vector were grown at 37ºC for 2 hours and then in baffled shake flasks containing "5052" auto-induction medium at 30ºC (250 rpm). Grow for 29 hours. Pellet the cells by centrifugation (20 min, 4500 rpm, 4ºC), discard the supernatant, and freeze the pellet at -20ºC overnight. The frozen cell pellet was then dissolved in DPBS at 1/12.5 of the original culture volume and incubated for 1 hour at 4ºC with gentle rotation to disrupt the outer membrane of the cells. Cells were pelleted again (20 minutes, 8500 rpm, 4ºC), and the supernatant containing NANOBODY ® ISVD protein was collected and filtered for immediate purification.
將帶FLAG3His 6標籤的NANOBODY ®ISVD蛋白通過固定化金屬親和層析(IMAC)或在NiIDA/NTA(Genscript)樹脂上用咪唑洗脫(用於前者)或酸性洗脫(用於後者)純化,然後進行脫鹽步驟(具有Sephadex G25樹脂的PD柱,GE Healthcare),並且如果需要,進行在D-PBS中的製備型尺寸排阻層析(SEC)(Superdex 75柱,GE Healthcare)。為此,使用了機器人站或ÄKTA純化系統。 FLAG3His 6 -tagged NANOBODY ® ISVD proteins are purified by immobilized metal affinity chromatography (IMAC) or on NiIDA/NTA (Genscript) resin with imidazole elution (for the former) or acidic elution (for the latter), This was followed by a desalting step (PD column with Sephadex G25 resin, GE Healthcare) and, if necessary, preparative size exclusion chromatography (SEC) in D-PBS (Superdex 75 column, GE Healthcare). For this purpose, robotic stations or ÄKTA purification systems are used.
將含有ALB構築塊的無標籤NANOBODY ®ISVD蛋白或構築體在Amsphere A3(JSR)或MabCaptureA(Poros)樹脂上純化,然後進行脫鹽步驟(具有Sephadex G25樹脂的PD柱,GE Healthcare),並且如果需要,進行在D-PBS中的製備型SEC(Superdex 75柱,GE Healthcare)。每當需要低LPS水準時,在純化/凝膠過濾層析期間實施N-辛基-β-d-吡喃葡萄糖苷(OGP;Alpha Aesar,目錄號J67390)處理。經由OD280/OD340測量確定濃度。透過SDS-PAGE和質譜進行品質控制。 Tag-free NANOBODY ® ISVD proteins or constructs containing ALB building blocks were purified on Amsphere A3 (JSR) or MabCaptureA (Poros) resin, followed by a desalting step (PD column with Sephadex G25 resin, GE Healthcare), and if necessary , preparative SEC (Superdex 75 column, GE Healthcare) was performed in D-PBS. Whenever low LPS levels were required, N-octyl-β-d-glucopyranoside (OGP; Alpha Aesar, Cat. No. J67390) treatment was performed during purification/gel filtration chromatography. Concentrations were determined via OD280/OD340 measurements. Quality control via SDS-PAGE and mass spectrometry.
6.26.2 實例Example 22 :多特異性:Multiple specificity ISVDISVD 構築體對pair of constructs TCRαβTCRαβ 、, CD33CD33 、, CD123CD123 和血清白蛋白的結合親和力binding affinity to serum albumin
產生如SEQ ID NO: 1所示的TCRαβ-CD33-CD123多特異性ISVD構築體。The TCRαβ-CD33-CD123 multispecific ISVD construct as shown in SEQ ID NO: 1 was generated.
6.2.16.2.1 對人和食蟹猴Humans and cynomolgus monkeys CD33CD33 和and CD123CD123 蛋白的親和力的測定Determination of protein affinity
透過基於表面等離子體共振(SPR)的測定在ProteOn XPR36儀器(BioRad Laboratories, Inc.)上在37ºC測量TCRαβ-CD33-CD123多特異性ISVD構築體(SEQ ID NO: 1)對huCD33L-Fc、cyCD33L-Fc(經由捕獲設置)或huCD123(經由捕獲設置)蛋白的親和力,表示為締合速率常數(k a)、解離速率常數(k d)和平衡解離常數(K D)。 Measurement of TCRαβ-CD33-CD123 multispecific ISVD construct (SEQ ID NO: 1) versus huCD33L-Fc, cyCD33L by surface plasmon resonance (SPR)-based assay on a ProteOn XPR36 instrument (BioRad Laboratories, Inc.) at 37ºC - Affinity of the Fc (via capture setup) or huCD123 (via capture setup) protein, expressed as association rate constant ( ka ), dissociation rate constant ( kd ) and equilibrium dissociation constant ( KD ).
用於測量對CD33的結合親和力的設置Setup for measuring binding affinity to CD33
使用EDC(1-乙基-3-(3-二甲基氨基丙基)碳二亞胺和NHS(N-羥基琥珀醯亞胺酯)化學,透過胺偶聯將抗huIgG(Fc)固定在GLH(長矩陣,高容量)感測器晶片上。接下來,捕獲huCD33L-Fc和cyCD33L-Fc(締合:120 s,25 µL/min)。以不同濃度(0.4至625 nM)注射如SEQ ID NO: 1所示的純化的TCRαβ-CD33-CD123多特異性ISVD構築體持續120 s,隨後解離900 s。Anti-huIgG(Fc) was immobilized via amine coupling using EDC (1-ethyl-3-(3-dimethylaminopropyl)carbodiimide and NHS (N-hydroxysuccinimide ester) chemistry) GLH (long matrix, high capacity) sensor wafer. Next, capture huCD33L-Fc and cyCD33L-Fc (association: 120 s, 25 µL/min). Inject as SEQ at different concentrations (0.4 to 625 nM) Purified TCRαβ-CD33-CD123 multispecific ISVD construct shown in ID NO: 1 for 120 s followed by dissociation for 900 s.
用於測量對CD123的結合親和力的設置Setup for measuring binding affinity to CD123
使用EDC(1-乙基-3-(3-二甲基氨基丙基)碳二亞胺和NHS(N-羥基琥珀醯亞胺酯)化學,透過胺偶聯將抗huIgG(Fc)固定在GLH(長矩陣,高容量)感測器晶片上。接下來,捕獲huCD123-Fc和cyCD123-Fc(締合:120 s,25 µL/min)。以不同濃度(1.2至300 nM)注射如SEQ ID NO: 1所示的純化的TCRαβ-CD33-CD123多特異性ISVD構築體持續120 s,隨後解離900 s,按45 µl/min。Anti-huIgG(Fc) was immobilized via amine coupling using EDC (1-ethyl-3-(3-dimethylaminopropyl)carbodiimide and NHS (N-hydroxysuccinimide ester) chemistry) GLH (long matrix, high capacity) sensor wafer. Next, capture huCD123-Fc and cyCD123-Fc (association: 120 s, 25 µL/min). Inject as SEQ at different concentrations (1.2 to 300 nM) Purified TCRαβ-CD33-CD123 multispecific ISVD construct shown in ID NO: 1 for 120 s followed by dissociation for 900 s at 45 µl/min.
透過減去參考分析物泳道和空白緩衝液注射物來對資料進行雙重參比。使用ProteOn Manager 3.1.0(3.1.0.6版)軟體應用朗繆爾1:1相互作用模型計算親和力常數(k a、k d、K D)。 Data were double referenced by subtracting the reference analyte lane and blank buffer injection. ProteOn Manager 3.1.0 (version 3.1.0.6) software was used to calculate the affinity constants ( ka , k d , K D ) by applying the Langmuir 1:1 interaction model.
如SEQ ID NO: 1所示的TCRαβ-CD33-CD123多特異性ISVD構築體對人和食蟹猴CD33以及人和食蟹猴CD123的親和力的測量結果總結在下 表 2和 表 3中。 Measurements of the affinity of the TCRαβ-CD33-CD123 multispecific ISVD construct as shown in SEQ ID NO: 1 for human and cynomolgus CD33 and human and cynomolgus CD123 are summarized in Tables 2 and 3 below.
表surface
22
:基於: Based on
SPRSPR
對於for
TCRαβ-CD33-CD123TCRαβ-CD33-CD123
多特異性multispecific
ISVDISVD
構築體對人和食蟹猴Constructs for humans and cynomolgus monkeys
CD33CD33
蛋白的親和力的測定Determination of protein affinity
TCRαβ-CD33-CD123多特異性ISVD構築體對食蟹猴CD33的反應性(K D= 6.9 nM)與對人CD33的反應性(K D= 7.6 nM)是可比的。 The reactivity of the TCRαβ-CD33-CD123 multispecific ISVD construct to cynomolgus monkey CD33 (K D = 6.9 nM) was comparable to the reactivity to human CD33 (K D = 7.6 nM).
表surface
33
:基於: Based on
SPRSPR
對於for
TCRαβ-CD33-CD123TCRαβ-CD33-CD123
多特異性multispecific
ISVDISVD
構築體對人和食蟹猴Constructs for humans and cynomolgus monkeys
CD123CD123
蛋白的動力學的測定Determination of protein kinetics
TCRαβ-CD33-CD123多特異性ISVD構築體對人CD123的反應性(K D= 0.59 nM)是對食蟹猴CD123的反應性(K D= 2 nM)的3.3倍。 The TCRαβ-CD33-CD123 multispecific ISVD construct was 3.3-fold more reactive to human CD123 (K D = 0.59 nM) than to cynomolgus monkey CD123 (K D = 2 nM).
結果( 表 2和 表 3)證明多特異性ISVD構築體以高親和力結合人/食蟹猴CD33和人/食蟹猴CD123。 The results ( Tables 2 and 3 ) demonstrate that the multispecific ISVD construct binds human/cynomolgus CD33 and human /cynomolgus CD123 with high affinity.
6.2.26.2.2 對人和食蟹猴Humans and cynomolgus monkeys TCRαβTCRαβ 蛋白的親和力的測定Determination of protein affinity
透過基於SPR的測定在ProteOn XPR36儀器(BioRad Laboratories, Inc.)上在37ºC評價TCRαβ-CD33-CD123多特異性ISVD構築體(SEQ ID NO: 1)對重組huTCR(2XN9)-拉鍊蛋白、cyTCR(AEA41865)-拉鍊蛋白(經由塗佈設置)的親和力,表示為締合速率常數(K a)、解離速率常數(k d)和平衡解離常數(K D)。 The response of the TCRαβ-CD33-CD123 multispecific ISVD construct (SEQ ID NO: 1) to recombinant huTCR(2XN9)-zipperin, cyTCR( AEA41865)-zipper protein (set via coating), expressed as association rate constant ( Ka ), dissociation rate constant ( kd ) and equilibrium dissociation constant ( KD ).
用於測量對TCRαβ的結合親和力的設置Setup for measuring binding affinity to TCRαβ
huTCR(2XN9)-拉鍊、cyTCR(AEA41865)-拉鍊蛋白包被在GLC(短矩陣,正常容量)感測器晶片上。以不同濃度(0.4至625 nM)注射如SEQ ID NO: 1所示的純化的TCRαβ-CD33-CD123多特異性ISVD構築體持續120 s,隨後解離900 s。huTCR(2XN9)-zipper, cyTCR(AEA41865)-zipper proteins are coated on GLC (short matrix, normal capacity) sensor wafers. Purified TCRαβ-CD33-CD123 multispecific ISVD constructs as shown in SEQ ID NO: 1 were injected at various concentrations (0.4 to 625 nM) for 120 s, followed by dissociation for 900 s.
透過減去參考分析物泳道和空白緩衝液注射物來對資料進行雙重參比。使用ProteOn Manager 3.1.0(3.1.0.6版)軟體應用朗繆爾1:1相互作用模型計算親和力常數(k a、k d、K D)。 Data were double referenced by subtracting the reference analyte lane and blank buffer injection. ProteOn Manager 3.1.0 (version 3.1.0.6) software was used to calculate the affinity constants ( ka , k d , K D ) by applying the Langmuir 1:1 interaction model.
如SEQ ID NO: 1所示的TCRαβ-CD33-CD123多特異性ISVD構築體對人和食蟹猴TCRαβ的親和力的測量結果總結在下 表 4中。採用僅由與ALB23002(SEQ ID NO: 5)連接的TCRαβ構築塊(SEQ ID NO: 2)組成的ISVD作為參考。 Measurements of the affinity of the TCRαβ-CD33-CD123 multispecific ISVD construct as shown in SEQ ID NO: 1 for human and cynomolgus TCRαβ are summarized in Table 4 below. An ISVD consisting only of the TCRαβ building block (SEQ ID NO: 2) linked to ALB23002 (SEQ ID NO: 5) was used as a reference.
表surface
44
:基於: Based on
SPRSPR
對於for
TCRαβ-CD33-CD123TCRαβ-CD33-CD123
多特異性multispecific
ISVDISVD
構築體和參考Constructs and References
TCR-ISVDTCR-ISVD
構築體對人和食蟹猴Constructs for humans and cynomolgus monkeys
TCRαβTCRαβ
的動力學的測定determination of kinetics
TCRαβ-CD33-CD123多特異性ISVD構築體對食蟹猴TCRαβ的反應性(K D= 6.7 nM)是對人TCRαβ的反應性(K D= 21 nM)的3倍。 The TCRαβ-CD33-CD123 multispecific ISVD construct was 3-fold more reactive to cynomolgus monkey TCRαβ (K D = 6.7 nM) than to human TCRαβ (K D = 21 nM).
結果( 表 4)證明多特異性ISVD構築體以高親和力結合人/食蟹猴TCRαβ。 The results ( Table 4 ) demonstrate that the multispecific ISVD construct binds human/cynomolgus TCRαβ with high affinity.
6.2.36.2.3 對人、小鼠和食蟹猴血清白蛋白的親和力的測定Determination of affinity for human, mouse and cynomolgus monkey serum albumin
透過基於SPR的測定在ProteOn XPR36儀器(BioRad Laboratories, Inc.)上在37ºC評價TCRαβ-CD33-CD123多特異性ISVD構築體(SEQ ID NO: 1)經由C末端ALB23002半衰期延長部(經由塗佈設置)對重組人、食蟹猴和小鼠血清白蛋白的結合親和力,表示為締合速率常數(k a)、解離速率常數(k d)和平衡解離常數(K D)。 Evaluation of the TCRαβ-CD33-CD123 multispecific ISVD construct (SEQ ID NO: 1) via the C-terminal ALB23002 half-life extender (via coating setup) by SPR-based assay on a ProteOn XPR36 instrument (BioRad Laboratories, Inc.) at 37ºC ) to recombinant human, cynomolgus monkey and mouse serum albumin, expressed as association rate constant ( ka ), dissociation rate constant ( kd ) and equilibrium dissociation constant ( KD ).
用於測量對血清白蛋白的結合親和力的設置Setup for measuring binding affinity to serum albumin
透過使用EDC和NHS化學使用胺偶聯將人、食蟹猴和小鼠血清白蛋白固定在ProteOn GLC感測器晶片上(使用的運行緩衝液:HBS-EP+,pH 7.4)。將白蛋白以在pH 4.5乙酸鹽緩衝液中2.5 µg/mL(HSA和MSA)和5 µg/mL(CSA)兩種濃度固定,使CSA的固定水平升高至高達220 RU,MSA為150 RU,以及HSA為110 RU。以不同濃度(4.3 nM與416 nM之間)注射純化的多價V HH持續2分鐘(流速45 µL/min),隨後解離900 s。循環之間的再生由以下組成:以 100 µL/min注射10 mM甘胺酸-HCL(pH 1.5)持續47 s。 Human, cynomolgus monkey and mouse serum albumin were immobilized on the ProteOn GLC sensor chip using amine coupling using EDC and NHS chemistry (running buffer used: HBS-EP+, pH 7.4). Albumin was immobilized at 2.5 µg/mL (HSA and MSA) and 5 µg/mL (CSA) in pH 4.5 acetate buffer, increasing immobilization levels up to 220 RU for CSA and 150 RU for MSA. , and HSA is 110 RU. Purified polyvalent VHH was injected at different concentrations (between 4.3 nM and 416 nM) for 2 min (flow rate 45 µL/min), followed by dissociation for 900 s. Regeneration between cycles consisted of injection of 10 mM glycine-HCL (pH 1.5) at 100 µL/min for 47 s.
透過減去參考配體泳道和緩衝液注射物來對資料進行雙重參比。使用ProteOn Manager 3.1.0(3.1.0.6版)軟體模型透過用朗繆爾1:1相互作用模型擬合來評價經處理的曲線,並計算親和力常數(k a、k d、K D)。 Data were double referenced by subtracting reference ligand lanes and buffer injections. The processed curves were evaluated by fitting with the Langmuir 1:1 interaction model using the ProteOn Manager 3.1.0 (version 3.1.0.6) software model, and the affinity constants ( ka , kd , KD ) were calculated.
如SEQ ID NO: 1所示的TCRαβ-CD33-CD123多特異性ISVD構築體對人、小鼠和食蟹猴血清白蛋白的親和力的測量結果總結在下 表 5中。 Measurements of the affinity of the TCRαβ-CD33-CD123 multispecific ISVD construct as shown in SEQ ID NO: 1 for human, mouse and cynomolgus monkey serum albumin are summarized in Table 5 below.
表surface
55
:基於: Based on
SPRSPR
對於for
TCRαβ-CD33-CD123TCRαβ-CD33-CD123
多特異性multispecific
ISVDISVD
構築體對血清白蛋白的親和力的測定Determination of the affinity of the construct for serum albumin
確認了對CSA的交叉反應性。此外,雖然沒有報導動力學參數,但對MSA的親和力良好,足以獲得半衰期延長並採用血清白蛋白的半衰期。Cross-reactivity to CSA was confirmed. Furthermore, although no kinetic parameters were reported, the affinity for MSA was good enough to obtain half-life extension and use that of serum albumin.
結果( 表 5)證明多特異性ISVD構築體以高親和力結合人/小鼠/食蟹猴TCRαβ。 The results ( Table 5 ) demonstrate that the multispecific ISVD construct binds human/mouse/cynomolgus TCRαβ with high affinity.
6.36.3 實例Example 33 :多特異性:Multiple specificity ISVDISVD 構築體與膜結合Structure and membrane binding CD33CD33 和and // 或or CD123CD123 的結合親和力The binding affinity of
用於測量與標靶細胞株上的CD33/CD123的結合親和力的設置Setup for measuring binding affinity to CD33/CD123 on target cell lines
使用流式細胞術評價TCRαβ-CD33-CD123多特異性ISVD構築體對表現CD33和/或CD123的標靶細胞株的結合親和力。表現CD123的標靶細胞株詳細描述於WO2018/091606A1中。Flow cytometry was used to evaluate the binding affinity of the TCRαβ-CD33-CD123 multispecific ISVD construct to target cell lines expressing CD33 and/or CD123. Target cell lines expressing CD123 are described in detail in WO2018/091606A1.
如下產生轉染的CD33細胞。使用Flp-In™定點重組技術(用於透過Flp重組酶介導的整合產生穩定哺乳動物表現細胞株的Flp-In™系統(Invitrogen,K601001,K601002))產生重組過表現了CD33的穩定CHO Flp-In(Invitrogen,R758-07)細胞株。特此,由源自釀酒酵母的Flp重組酶(pOG44)在FRT(Flp重組標靶)位點的特定基因體位置發生DNA整合。Flp-In™宿主細胞株和表現質體(pcDNA5)均含有該FRT位點,由此允許進行單一同源DNA重組。人CD33的序列源自NCBI RefSeq NP_001763,食蟹猴CD123的序列源自NCBI genbank號XP_005590138。Transfected CD33 cells were generated as follows. Stable CHO Flp recombinantly expressed CD33 was generated using Flp-In™ site-directed recombination technology (Flp-In™ system for generation of stable mammalian expressing cell lines through Flp recombinase-mediated integration (Invitrogen, K601001, K601002)) -In (Invitrogen, R758-07) cell line. Hereby, DNA integration occurs at a specific gene body position at the FRT (Flp recombination target) site by Flp recombinase (pOG44) derived from Saccharomyces cerevisiae. Both the Flp-In™ host cell line and the expression plasmid (pcDNA5) contain this FRT site, allowing single homologous DNA recombination. The sequence of human CD33 was derived from NCBI RefSeq NP_001763, and the sequence of cynomolgus monkey CD123 was derived from NCBI genbank number XP_005590138.
簡而言之,將細胞收穫並轉移到V型底96孔板(5x10 4個細胞/孔),並在30 µM臨床級HSA(CSL Behring,2160-679)的存在下,在FACS緩衝液(D-PBS(Gibco,14190),具有10% FBS(Sigma,F7524)和0.05%疊氮化鈉(Acros organics,19038))中與TCRαβ-CD123-CD33多特異性ISVD構築體的系列稀釋物以100 µL的最終體積在4ºC下培育30 min。接下來,將細胞用FACS緩衝液洗滌三次,並與1 µg/mL小鼠單株抗FLAG® M2抗體(Sigma-Aldrich,F1804)在4ºC下培育30 min以檢測帶FLAG3His 6標籤的CD123-CD33-TCR多特異性ISVD構築體,或與3 µg/mL mAb抗V HH抗體(ABH0077)(APS + 內部,A-0006-00_ABH0077_SF_AB1891)培育以檢測具有ALB BB的NANOBODY® ISVD。接下來,將細胞用FACS緩衝液洗滌3次,並與5 µg/mL別藻藍蛋白(APC)AffiniPure 山羊抗小鼠IgG(亞類1+2a+2b+3)(Fcγ片段特異性)(Jackson Immunoresearch,115-136-071)以100 µL的最終體積在4ºC下培育30 min。隨後,將細胞重懸浮於補充有1 µg/mL碘化丙啶(PI,Sigma P4170)的50 µL冷FACS緩衝液中,以區分活細胞和死細胞。染色後,使用MACSQuant X流式細胞儀(Miltenyi Biotec)採集細胞,並使用FlowLogic(Miltenyi Biotec)進行分析。首先,基於FSC-SSC分佈選擇占總事件超過80%的P1群體,以區分細胞和碎片。從該群體(P1)中排除PI陽性(死)細胞,並評價PI陰性細胞的中值APC螢光強度。 Briefly, cells were harvested and transferred to a V-bottom 96-well plate (5x10 4 cells/well) and incubated in FACS buffer ( Serial dilutions of the TCRαβ-CD123-CD33 multispecific ISVD construct in D-PBS (Gibco, 14190) with 10% FBS (Sigma, F7524) and 0.05% sodium azide (Acros organics, 19038)) with A final volume of 100 µL was incubated for 30 min at 4ºC. Next, cells were washed three times with FACS buffer and incubated with 1 µg/mL mouse monoclonal anti-FLAG® M2 antibody (Sigma-Aldrich, F1804) for 30 min at 4ºC to detect FLAG3His 6- tagged CD123-CD33 -TCR multispecific ISVD construct, or incubated with 3 µg/mL mAb anti-V HH antibody (ABH0077) (APS + in-house, A-0006-00_ABH0077_SF_AB1891) to detect NANOBODY® ISVD with ALB BB. Next, cells were washed 3 times with FACS buffer and incubated with 5 µg/mL Allophycocyanin (APC) AffiniPure Goat Anti-Mouse IgG (Subclass 1+2a+2b+3) (Fcγ Fragment Specific) ( Jackson Immunoresearch, 115-136-071) in a final volume of 100 µL and incubated at 4ºC for 30 minutes. Subsequently, cells were resuspended in 50 µL cold FACS buffer supplemented with 1 µg/mL propidium iodide (PI, Sigma P4170) to distinguish live and dead cells. After staining, cells were collected using a MACSQuant X flow cytometer (Miltenyi Biotec) and analyzed using FlowLogic (Miltenyi Biotec). First, the P1 population accounting for more than 80% of the total events was selected based on FSC-SSC distribution to distinguish cells and debris. PI positive (dead) cells were excluded from this population (P1) and the median APC fluorescence intensity of PI negative cells was evaluated.
用於測量與原代T細胞的結合親和力的設置Setup for measuring binding affinity to primary T cells
使用帶FLAG3His 6標籤的單價TCR ISVD作為配體,使用流式細胞術在競爭設置中評價TCRαβ-CD33-CD123多特異性ISVD構築體對原代T細胞的結合親和力。 The binding affinity of TCRαβ-CD33-CD123 multispecific ISVD constructs to primary T cells was evaluated using flow cytometry in a competition setting using FLAG3His 6- tagged monovalent TCR ISVDs as ligands.
簡而言之,將人或食蟹猴原代T細胞解凍並轉移到V型底96孔板(100 µL中,7.5x10 4個細胞/孔),並在30 µM臨床級HSA(CSL Behring,2160-679)的存在下,在FACS緩衝液(D-PBS(Gibco,14190),具有10% FBS(Sigma,F7524)和0.05%疊氮化鈉(Acros organics,19038))中與TCRαβ-CD33-CD123多特異性ISVD構築體的系列稀釋物和固定濃度的配體以100 µL的最終體積在4ºC下培育30 min。測定中使用的配體濃度低於其結合EC 50。在4ºC下培育90 min的時間段後,透過流式細胞術測定配體結合水平。隨之,將細胞洗滌3次,並與1 μg/ml小鼠單株抗FLAG® M2抗體(Sigma-Aldrich,F1804)在4ºC下培育30 min,再次洗滌,並與5 µg/ml別藻藍蛋白(APC)AffiniPure山羊抗小鼠IgG(亞類1+2a+2b+3)(FCγ片段特異性)(Jackson Immunoresearch, 115-136-071)以100 µL的最終體積在4ºC下培育30 min。隨後,將細胞重懸浮在補充有1 µg/ml碘化丙啶(PI,Sigma,P4170)的FACS緩衝液中,以區分活細胞和死細胞。染色後,使用MACSQuant X流式細胞儀(Miltenyi Biotec)採集細胞,並使用FlowLogic(Miltenyi Biotec)進行分析。首先,基於FSC-SSC分佈選擇占總事件超過80%的P1群體,以區分細胞和碎片。從該群體(P1)中排除PI陽性(死)細胞,並評價PI陰性細胞的中值APC螢光強度。 Briefly, human or cynomolgus primary T cells were thawed and transferred to V-bottom 96-well plates ( 7.5x10 cells/well in 100 µL) and incubated in 30 µM clinical grade HSA (CSL Behring, 2160-679) with TCRαβ-CD33 in FACS buffer (D-PBS (Gibco, 14190) with 10% FBS (Sigma, F7524) and 0.05% sodium azide (Acros organics, 19038)) -Serial dilutions of CD123 multispecific ISVD constructs and fixed concentrations of ligand were incubated in a final volume of 100 µL for 30 min at 4ºC. The ligand concentration used in the assay was below its binding EC50 . After an incubation period of 90 minutes at 4ºC, ligand binding levels were determined by flow cytometry. Subsequently, the cells were washed three times and incubated with 1 μg/ml mouse monoclonal anti-FLAG® M2 antibody (Sigma-Aldrich, F1804) for 30 min at 4ºC, washed again, and incubated with 5 μg/ml Allophycocyanin Protein (APC) AffiniPure Goat Anti-Mouse IgG (Subclass 1+2a+2b+3) (FCγ Fragment Specific) (Jackson Immunoresearch, 115-136-071) was incubated in a final volume of 100 µL for 30 min at 4ºC. Subsequently, cells were resuspended in FACS buffer supplemented with 1 µg/ml propidium iodide (PI, Sigma, P4170) to differentiate between live and dead cells. After staining, cells were collected using a MACSQuant X flow cytometer (Miltenyi Biotec) and analyzed using FlowLogic (Miltenyi Biotec). First, the P1 population accounting for more than 80% of the total events was selected based on FSC-SSC distribution to distinguish cells and debris. PI positive (dead) cells were excluded from this population (P1) and the median APC fluorescence intensity of PI negative cells was evaluated.
人-食蟹猴交叉反應性是透過如下方式評價:如上所述使用流式細胞術測試單價CD33構築塊(SEQ ID NO: 3)和單價CD123構築塊(SEQ ID NO: 4)與人或食蟹猴CD33轉染的細胞株或與人或食蟹猴CD123轉染的細胞株的結合。結果以圖形表示於 圖 2中。不同實驗的EC 50值總結於 表 6(CD33轉染的標靶細胞)和 表 7(CD123轉染的標靶細胞)中。 Human-cynomolgus cross-reactivity was evaluated by testing the monovalent CD33 building block (SEQ ID NO: 3) and the monovalent CD123 building block (SEQ ID NO: 4) with human or food using flow cytometry as described above. Cynomolgus CD33-transfected cell lines or combinations with human or cynomolgus CD123-transfected cell lines. The results are graphically represented in Figure 2 . EC50 values for different experiments are summarized in Table 6 (CD33-transfected target cells) and Table 7 (CD123-transfected target cells).
表surface
66
::
CD33CD33
構築塊building blocks
((
SEQ ID NO: 3SEQ ID NO: 3
))
與表現and performance
huCD33huCD33
或or
cyCD33cyCD33
的細胞的結合的combination of cells
EC
50 EC 50
值。value.
表surface
77
::
CD123CD123
構築塊building blocks
((
SEQ ID NO: 4SEQ ID NO: 4
))
與表現and performance
huCD123huCD123
或or
cyCD123cyCD123
的細胞的結合的combination of cells
EC
50 EC 50
值。value.
確認了單價CD33和CD123構築塊與人和食蟹猴膜標靶的結合。關於結合CD33,在人與食蟹猴之間EC 50的差異為降低小於2倍,以及關於結合CD123細胞為降低3倍(表7)。 Binding of monovalent CD33 and CD123 building blocks to human and cynomolgus monkey membrane targets was confirmed. The difference in EC50 between humans and cynomolgus monkeys was less than a 2-fold decrease for binding to CD33 and a 3-fold decrease for binding to CD123 cells (Table 7).
總之,除了對重組人和食蟹猴CD33和CD123蛋白的結合親和力外,還確認了TCRαβ-CD33-CD123多特異性ISVD構築體與人和食蟹猴細胞表現的CD33和CD123的劑量依賴性結合(n=1)。In conclusion, in addition to binding affinities for recombinant human and cynomolgus CD33 and CD123 proteins, dose-dependent binding of the TCRαβ-CD33-CD123 multispecific ISVD construct to CD33 and CD123 exhibited by human and cynomolgus cells was confirmed (n =1).
在競爭設置中,如上所述使用流式細胞術評價CD123-CD33-TCR多特異性ISVD構築體和參考TCR-ISVD構築體(僅由與ALB23002(SEQ ID NO: 5)連接的TCRαβ構築塊(SEQ ID NO: 2)組成)與人和食蟹猴T細胞的結合( 圖 3)。 In a competition setting, the CD123-CD33-TCR multispecific ISVD construct and the reference TCR-ISVD construct (consisting only of the TCRαβ building block linked to ALB23002 (SEQ ID NO: 5)) were evaluated using flow cytometry as described above. SEQ ID NO: 2) Binding to human and cynomolgus monkey T cells ( Figure 3 ).
DRC的示例性例子描繪於 圖 4中。在多種健康供體T細胞上測試ISVD構築體。總體IC 50示於 表 8中。 An illustrative example of DRC is depicted in Figure 4 . ISVD constructs were tested on a variety of healthy donor T cells. Overall IC50 is shown in Table 8 .
表 8 :在人和食蟹猴 T 細胞競爭測定中如流式細胞術測定的 TCRαβ-CD33-CD123 多特異性 ISVD 構築體和參考 TCR-ISVD 構築體的總體 IC
50 ( M )
總之,確認了TCRαβ-CD33-CD123多特異性ISVD構築體對食蟹猴原代T細胞的交叉反應性。原代食蟹猴T細胞上的EC 50(= 729 nM)是在人原代T細胞上的EC 50(= 218 M)的約3倍 In conclusion, the cross-reactivity of the TCRαβ-CD33-CD123 multispecific ISVD construct on cynomolgus monkey primary T cells was confirmed. The EC 50 (= 729 nM) on primary cynomolgus monkey T cells is approximately 3 times higher than the EC 50 (= 218 M) on primary human T cells
6.46.4 實例Example 44 :多特異性:Multiple specificity ISVDISVD 構築體誘導的construct-induced TT 細胞介導的靶細胞殺傷cell-mediated target cell killing
6.4.16.4.1 基於阻抗的細胞毒性測定Impedance-based cytotoxicity assay
在基於阻抗的細胞毒性測定(例如,如WO 2018091606A1中所述)中,使用人或食蟹猴原代效應T細胞和黏附性標靶細胞,針對重定向T細胞介導的殺傷表徵ISVD構築體。使用xCELLigence儀器(Roche)測量由標靶細胞黏附到電極表面引發的阻抗變化。T細胞是非黏附性的,因此不會影響阻抗測量。xCELLigence® RTCA MP儀器量化電阻抗的變化,將其顯示為稱為細胞指數的無量綱參數,該參數與細胞覆蓋的組織培養孔的總面積成正比。向96 E-板(ACEA Biosciences;05 232 368 001)的每個孔中,添加在測定培養基(標靶細胞生長培養基(不具有選擇抗生素)+ 1% 青黴素/鏈黴素(Life technologies 目錄號15140))中的50 µL 4X濃度的HSA溶液(在一些測定中,使用200 µM以具有50 µM的最終濃度,在其他測定中使用120 µM以具有30 µM的最終濃度)。外孔不使用,並填充200 µL培養基或D-PBS。將96 E-板放置在xCELLigence®站中(在37ºC、5% CO2培養箱中),並在不存在細胞的情況下進行單次測量以測量測定培養基的背景阻抗。隨後,將測定培養基中的50 µL標靶細胞(2 x 10 4個細胞/孔)接種到96 E-板上,並添加50 µL在測定培養基中的系列稀釋ISVD構築體溶液(4X濃度)。(最終體積 = 200 μL)。在室溫下30 min後,每孔添加在測定培養基中的50 µL原代T細胞(3 x 105個細胞/孔),以實現15:1的效應物與標靶比率。將板放置在xCELLigence®站中,並每15 min測量阻抗,持續4天。以結果中指示的固定時間點分析資料。 Characterization of ISVD constructs for redirected T cell-mediated killing using human or cynomolgus monkey primary effector T cells and adherent target cells in an impedance-based cytotoxicity assay (e.g., as described in WO 2018091606A1) . An xCELLigence instrument (Roche) was used to measure impedance changes caused by adhesion of target cells to the electrode surface. T cells are non-adhesive and therefore do not affect impedance measurements. The xCELLigence® RTCA MP instrument quantifies changes in electrical impedance, displaying it as a dimensionless parameter called the cell index, which is proportional to the total area of the tissue culture well covered by the cells. To each well of a 96 E-plate (ACEA Biosciences; 05 232 368 001), add Assay Medium (Target Cell Growth Medium (without selective antibiotics) + 1% Penicillin/Streptomycin (Life technologies Cat. No. 15140 )) in 50 µL of 4X concentrated HSA solution (in some assays, use 200 µM to have a final concentration of 50 µM, in other assays use 120 µM to have a final concentration of 30 µM). The outer wells are not used and filled with 200 µL medium or D-PBS. Place the 96 E-Plate in the xCELLigence® Station (in a 37ºC, 5% CO2 incubator) and take a single measurement in the absence of cells to measure the background impedance of the assay medium. Subsequently, 50 µL of target cells (2 x 10 cells/well) in assay medium were plated onto a 96 E-plate and 50 µL of serially diluted ISVD construct solution in assay medium (4X concentration) was added. (Final volume = 200 μL). After 30 min at room temperature, add 50 µL of primary T cells (3 x 105 cells/well) per well in assay medium to achieve an effector to target ratio of 15:1. Place the plate in the xCELLigence® station and measure impedance every 15 min for 4 days. Data were analyzed at fixed time points indicated in the results.
6.4.26.4.2 基於流式細胞術的細胞毒性測定Flow cytometry-based cytotoxicity assay
在基於流式細胞術的細胞毒性測定中,使用人或食蟹猴原代T細胞作為效應細胞以及非黏附性標靶細胞,針對重定向T細胞介導的殺傷來表徵ISVD構築體。根據製造商的說明,使用PKH26紅色螢光細胞連接子試劑盒(Sigma,PKH26GL-1KT)用4 µM PKH26膜染料標記標靶細胞。將效應細胞(2.5 x 10 5個細胞/孔)和PKH標記的標靶細胞(2.5 x 10 4個細胞/孔)在96孔V型底板(Greiner Bio-one,# 651 180)中在標靶細胞株的測定培養基(具有1%青黴素/鏈黴素(Life Technologies,15140)和50 µM Alburex HSA(CSL Behring,2160-679)的標靶生長培養基)中共同培育(效應物與靶標比率為10:1)。為了分析濃度依賴性細胞裂解,將標靶測定培養基中ISVD構築體的系列稀釋物添加到細胞中,並在37ºC在5% CO2氣氛中培育18 h。培育後,透過離心使細胞沈澱並用FACS緩衝液(D-PBS(Gibco,14190),具有10% FBS(Sigma,F7524)和0.05%疊氮化鈉(Acros organics,19038))洗滌。隨後,將細胞重懸浮在補充有5 nM TO-PRO®-3碘化物(642⁄661)(ThermoFisher Scientific,T3605)的100 µL FACS緩衝液中,以區分活細胞和死細胞。使用MACSQuant X流式細胞儀(Miltenyi Biotec)分析細胞。每個樣品採集的總樣品體積為70 µL。對PKH26陽性細胞設置門控,並在該群體中測定TO-PRO®-3陽性細胞。特異性裂解百分比 = ((% TO-PRO-3+無構築體 – % TO-PRO-3+有構築體)/ % TO-PRO-3+無構築體)) x100。 ISVD constructs were characterized for redirected T cell-mediated killing in flow cytometry-based cytotoxicity assays using human or cynomolgus monkey primary T cells as effector cells and non-adherent target cells. Target cells were labeled with 4 µM PKH26 membrane dye using the PKH26 red fluorescent cell linker kit (Sigma, PKH26GL-1KT) according to the manufacturer's instructions. Effector cells (2.5 x 10 cells/well) and PKH-labeled target cells (2.5 x 10 cells/well) were plated in a 96-well V-bottom plate (Greiner Bio-one, #651 180) on target cells. Cell lines were cocultured in assay medium (targeted growth medium with 1% penicillin/streptomycin (Life Technologies, 15140) and 50 µM Alburex HSA (CSL Behring, 2160-679)) (effector to target ratio of 10 :1). To analyze concentration-dependent cell lysis, serial dilutions of ISVD constructs in target assay medium were added to cells and incubated for 18 h at 37ºC in a 5% CO2 atmosphere. After incubation, cells were pelleted by centrifugation and washed with FACS buffer (D-PBS (Gibco, 14190) with 10% FBS (Sigma, F7524) and 0.05% sodium azide (Acros organics, 19038)). Subsequently, cells were resuspended in 100 µL FACS buffer supplemented with 5 nM TO-PRO®-3 Iodide (642⁄661) (ThermoFisher Scientific, T3605) to differentiate between live and dead cells. Cells were analyzed using a MACSQuant X flow cytometer (Miltenyi Biotec). The total sample volume collected for each sample was 70 µL. Set a gate for PKH26-positive cells and measure TO-PRO®-3-positive cells within this population. Percent specific lysis = ((% TO-PRO-3+no construct – % TO-PRO-3+with construct)/ % TO-PRO-3+no construct)) x100.
TCRαβ-CD33-CD123多特異性ISVD構築體對CD33、CD123和TCR的功能交叉反應性分析是在基於阻抗的細胞毒性測定(xCELLigence)中使用人或食蟹猴原代T細胞和黏附性人或食蟹猴轉染的CD33或CD123細胞確定的。Functional cross-reactivity analysis of TCRαβ-CD33-CD123 multispecific ISVD constructs toward CD33, CD123, and TCR was performed in an impedance-based cytotoxicity assay (xCELLigence) using human or cynomolgus monkey primary T cells and adherent human or Cynomolgus monkeys were determined by transfection of CD33 or CD123 cells.
如上文在6.4.1和6.4.2中所述,所有測定均在存在過量HSA的情況下進行,以使NANOBODY® ISVD如上所述被HSA完全飽和。參考TCR-ISVD用作陰性對照。結果示於 圖 5和 圖 6以及 表 9中。 As described above in 6.4.1 and 6.4.2, all assays are performed in the presence of excess HSA such that NANOBODY® ISVD is fully saturated with HSA as described above. Reference TCR-ISVD was used as a negative control. The results are shown in Figures 5 and 6 and Table 9 .
6.4.36.4.3 結果result
圖 5和 圖 7中以圖形方式展示了比較人與食蟹猴原代T細胞的測定結果。使用來自不同人供體的T細胞對人T細胞介導的對人CD33和人CD123轉染細胞的細胞殺傷進行評價,從而可以計算總體IC 50值( 表 9) 。使用來自1隻食蟹猴的T細胞對食蟹猴T細胞介導的對人CD33和人CD123轉染細胞的殺傷進行評價。IC 50值總結在 表 10中。 The results of assays comparing human and cynomolgus monkey primary T cells are graphically presented in Figures 5 and 7 . Human T cell-mediated cell killing of human CD33- and human CD123-transfected cells was evaluated using T cells from different human donors, allowing calculation of overall IC50 values ( Table 9 ) . Cynomolgus T cell-mediated killing of human CD33- and human CD123-transfected cells was evaluated using T cells from one cynomolgus monkey. IC50 values are summarized in Table 10 .
表surface
99
:在基於阻抗: based on impedance
((
xCELLigencexCELLigence
))
的人people
TT
細胞介導的cell mediated
CD33+CD33+
或or
CD123+CD123+
細胞殺傷測定中,使用For cell killing assays, use
1515
比Compare
11
的效應物與靶標比率,在The effector to target ratio, in
50 µM HSA50 µM HSA
的存在下,in the presence of,
TCRαβ-CD33-CD123TCRαβ-CD33-CD123
的總體overall
IC
50 IC 50
((
MM
))
。.
關於CD33和CD123,對人標靶表現細胞的總體IC 50分別為5,4.10 -11M和2,5.10 -11M。 Regarding CD33 and CD123, the overall IC50 against human target expressing cells was 5,4.10 -11 M and 2,5.10 -11 M respectively.
表surface
1010
:在基於阻抗: based on impedance
((
xCELLigencexCELLigence
))
的食蟹猴cynomolgus monkey
TT
細胞介導的cell mediated
CD33+CD33+
或or
CD123+CD123+
細胞殺傷測定中,使用For cell killing assays, use
1515
比Compare
11
的效應物與標靶比率,在The effector to target ratio, in
50 µM HSA50 µM HSA
的存在下,in the presence of,
TCRαβ-CD33-CD123TCRαβ-CD33-CD123
的of
IC
50 IC 50
((
MM
))
。.
為了確認TCRαβ-CD33-CD123 ISVD構築體對TCR的人食蟹猴交叉反應性,如上所述在基於流式細胞術的T細胞介導的MOLM-13細胞殺傷中,使用人或原代T細胞與CD33、CD123雙重表現人MOLM-13標靶細胞株相組合,在50 µM HSA的存在下,評價ISVD構築體。這些結果的圖形展示示於 圖 6中。可獲得使用不同供體在人T細胞介導的殺傷測定中測試的TCRαβ-CD33-CD123 ISVD構築體的其他資料,從而計算總體EC 50值( 表 11)。食蟹猴T細胞介導的殺傷測定的EC 50值顯示在 表 12中。 To confirm the human cynomolgus monkey cross-reactivity of the TCRαβ-CD33-CD123 ISVD construct to TCR, human or primary T cells were used in flow cytometry-based T cell-mediated killing of MOLM-13 cells as described above. ISVD constructs were evaluated in the presence of 50 µM HSA in combination with a human MOLM-13 target cell line dually expressing CD33 and CD123. A graphical representation of these results is shown in Figure 6 . Additional data are available for TCRαβ-CD33-CD123 ISVD constructs tested in human T cell-mediated killing assays using different donors to calculate overall EC50 values ( Table 11 ). EC50 values for the cynomolgus monkey T cell-mediated killing assay are shown in Table 12 .
表surface
1111
:在用流式細胞術的人: People who are using flow cytometry
TT
細胞介導的cell mediated
MOLM-13MOLM-13
細胞殺傷測定中,使用For cell killing assays, use
1010
比Compare
11
的效應物與標靶比率,在The effector to target ratio, in
50 µM HSA50 µM HSA
的存在下,in the presence of,
A025001562A025001562
((
TCR-CD33-CD123TCR-CD33-CD123
多特異性multispecific
ISVDISVD
構築體,construct,
SEQ ID NO.: 1SEQ ID NO.: 1
))
的總體overall
EC
50 EC 50
((
MM
))
。.
表surface
1212
:在食蟹猴: In cynomolgus monkeys
TT
細胞介導的cell mediated
MOLM-13MOLM-13
細胞殺傷測定中,使用For cell killing assays, use
1010
比Compare
11
的效應物與標靶比率,The effector-to-target ratio of
TCRαβ-CD33-CD123 ISVDTCRαβ-CD33-CD123 ISVD
構築體的Architectural
EC50EC50
((
MM
))
。.
總之,TCRαβ-CD33-CD123 ISVD構築體在人和食蟹猴人標靶細胞介導的殺傷測定中均具有功能。所述ISVD對CD33/CD123雙重陽性AML細胞株的總體殺傷效力為1,8.10 -11M。 In summary, the TCRαβ-CD33-CD123 ISVD construct was functional in both human and cynomolgus monkey human target cell-mediated killing assays. The overall killing effect of the ISVD on CD33/CD123 double-positive AML cell lines was 1.8.10 -11 M.
6.56.5 實例Example 55 :在植入: during implantation TT 細胞人類化Cell humanization NSGNSG 小鼠中的in mice CD123 +Molm-13-luc CD123 + Molm-13-luc 播散性disseminated AMLAML 模型中in model TCRαβ-CD33-CD123TCRαβ-CD33-CD123 多特異性multispecific ISVDISVD 構築體的臨床前體內功效Preclinical in vivo efficacy of constructs
6.5.16.5.1 材料和方法Materials and methods
細胞株和人材料Cell lines and human materials
表現CD123 Molm-13的人AML衍生細胞株獲自Deutsche Sammlung von Mikroorganismen und Zellkulturen(布倫瑞克(Braunschweig),德國)。Molm-13細胞在RPMI1640 Glutamax培養基(用20%胎牛血清補足)中以培養物生長(37ºC,5% CO 2,95%濕度)。用非複製性慢病毒攜帶的螢光素酶載體(SV40-PGL4-Puro)感染細胞;使用 2 µg/ml嘌呤黴素選擇多克隆Molm-13-luc。 A human AML-derived cell line expressing CD123 Molm-13 was obtained from Deutsche Sammlung von Mikroorganismen und Zellkulturen (Braunschweig, Germany). Molm-13 cells were grown in culture (37ºC, 5% CO2 , 95% humidity) in RPMI1640 Glutamax medium (supplemented with 20% fetal calf serum). Cells were infected with a non-replicating lentivirus-borne luciferase vector (SV40-PGL4-Puro); polyclonal Molm-13-luc was selected using 2 µg/ml puromycin.
用於體內投予的人For human administration TT 細胞純化和擴增Cell purification and expansion
EFS(Etablissement Français du Sang,法蘭西島(Île-de-France),法國)提供來自健康供體的新鮮人外周血。EFS (Etablissement Français du Sang, Île-de-France, France) provides fresh human peripheral blood from healthy donors.
將新鮮人外周血單核細胞(PBMC透過在室溫下200 g持續40 min的Ficoll梯度離心(無需制動)進行分離。將沈澱進行洗滌並重懸浮於由磷酸鹽緩衝鹽水(PBS)補足的50 ml最終體積中。透過Vi-CELL計數器(Beckman Coulter Life Sciences,佈雷亞(Brea),加利福尼亞州,美國)定義總活PBMC數量。將沈澱回收在autoMACS運行緩衝液(Miltenyi Biotec)中。根據製造商的說明,使用泛T細胞分離試劑盒(Miltenyi Biotec)和autoMACS從PBMC中分離T細胞。使用基於CD3和CD28共刺激的T細胞TRANSACT基質啟動/擴增試劑盒(Miltenyi Biotec)在體外經14天啟動和擴增純化的T細胞。根據Miltenyi程式,啟動方案涉及在補充有20 000 IU可溶性IL-2和1%青黴素-鏈黴素(Gibco)的TexMACS培養基(Miltenyi Biotec)中在TRANSACT基質的存在下將T細胞培養2周。在擴增的第14天,收穫T細胞並以5 x 10 7個細胞/ml的最終濃度重懸浮在PBS中,通過腹膜內(IP)注射向每隻動物投予10 7個細胞。經測試,動物注射前的T細胞存活力高於85%。 Fresh human peripheral blood mononuclear cells (PBMC) were isolated by Ficoll gradient centrifugation (without braking) at 200 g for 40 min at room temperature. The pellet was washed and resuspended in 50 ml of phosphate buffered saline (PBS). in the final volume. Total viable PBMC numbers were defined by Vi-CELL counter (Beckman Coulter Life Sciences, Brea, CA, USA). The pellet was recovered in autoMACS running buffer (Miltenyi Biotec). According to the manufacturer's Instructions. Isolation of T cells from PBMC using Pan-T Cell Isolation Kit (Miltenyi Biotec) and autoMACS. Priming over 14 days in vitro using CD3 and CD28 costimulation-based T Cell TRANSACT Matrix Priming/Expansion Kit (Miltenyi Biotec) and expansion of purified T cells. According to the Miltenyi protocol, the priming protocol involves priming in TexMACS medium (Miltenyi Biotec) supplemented with 20 000 IU soluble IL-2 and 1% penicillin-streptomycin (Gibco) in the presence of TRANSACT matrix T cells were cultured for 2 weeks. On day 14 of expansion, T cells were harvested and resuspended in PBS at a final concentration of 5 x 10 cells/ml and administered to each animal via intraperitoneal (IP) injection 10 7 cells. After testing, the viability of T cells in animals before injection was higher than 85%.
體內表徵In vivo characterization
所有體內實驗均經Sanofi倫理委員會批准,並在AAALAC認可的設施中按照當地和機構法律、倫理和指南進行。All in vivo experiments were approved by the Sanofi Ethics Committee and performed in AAALAC-accredited facilities in compliance with local and institutional laws, ethics, and guidelines.
在未輻照的NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ(NSG)小鼠(Charles River Laboratories,Saint-Germain-Nuelles,法國)中在Molm13-luc AML植入後,評價TCRαβ-CD33-CD123多特異性ISVD構築體(SEQ ID NO: 1)抗腫瘤活性。在第0天,將6至8周齡的雌性動物靜脈內(IV)對每隻小鼠植入10 6/0.2 ml Molm-13-luc細胞。在第1天,對相同動物,每隻小鼠 腹膜內植入10 7/0.2 ml人T細胞。 Evaluation of TCRαβ-CD33-CD123 multispecificity after Molm13-luc AML implantation in non-irradiated NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ (NSG) mice (Charles River Laboratories, Saint-Germain-Nuelles, France) Antitumor activity of ISVD construct (SEQ ID NO: 1). On day 0, 6- to 8-week-old female animals were implanted intravenously (IV) with 10 6 /0.2 ml Molm-13-luc cells per mouse. On day 1, the same animals were implanted intraperitoneally with 10 7 /0.2 ml human T cells per mouse.
基於透過第3天長骨信號分段評價的全身生物發光成像(BLI)信號均勻性和腫瘤骨髓移植,將動物分佈在各組中。將小鼠用TCRαβ-CD33-CD123多特異性ISVD構築體(SEQ ID NO: 1)從第4天至第12天以12、1.2、0.12和0.012 nmol/kg Q2D,或者用不具有CD33或CD123結合ISVD的參考物(與Alb-ISVD(SEQ ID NO: 5)連接的TCRαβ-ISVD(SEQ ID NO: 2))以1.2 nmol/kg QD(第4-13天),或用CD123/CD3陽性對照以1.3 nmol/kg QD(第4-13天)IV處理,見 表 13。進行縱向體內生物發光成像(BLI)以監測播散性腫瘤的生長。在第14天犧牲小鼠並在BLI下進行屍檢,以評估在諸如肝臟、脾臟、卵巢和腹部脂肪等深層軟組織中的影響。 Animals were distributed among groups based on whole-body bioluminescence imaging (BLI) signal uniformity assessed by day 3 long bone signal segmentation and tumor bone marrow transplantation. Mice were treated with the TCRαβ-CD33-CD123 multispecific ISVD construct (SEQ ID NO: 1) from day 4 to day 12 at 12, 1.2, 0.12 and 0.012 nmol/kg Q2D, or without CD33 or CD123 Reference bound ISVD (TCRαβ-ISVD (SEQ ID NO: 2) linked to Alb-ISVD (SEQ ID NO: 5)) at 1.2 nmol/kg QD (days 4-13), or positive for CD123/CD3 Controls were treated IV with 1.3 nmol/kg QD (days 4-13), see Table 13 . Longitudinal in vivo bioluminescence imaging (BLI) was performed to monitor disseminated tumor growth. Mice were sacrificed on day 14 and necropsied under BLI to evaluate the effects in deep soft tissues such as liver, spleen, ovary, and abdominal fat.
表 13 :化合物評價研究設計
資料收集和功效標準Data collection and efficacy standards
從第3天到測定結束監測動物體重以跟蹤療法的影響。連續3天產生20%體重減輕或15%體重減輕或者10%、或更多藥物性死亡的劑量被認為是過度毒性劑量。動物體重包括腫瘤重量。Animal body weights were monitored from day 3 to the end of the assay to track the effects of therapy. A dose that produces 20% body weight loss or 15% body weight loss or 10% or more drug-induced death for 3 consecutive days is considered an excessively toxic dose. Animal body weight includes tumor weight.
透過以下方式評估腫瘤生長:在腫瘤注射後第3、7、10和14天,透過體內BLI使用具有Living Image 4.5.2採集軟體(PerkinElmer)的IVIS Lumina XRMS成像儀(PerkinElmer,沃爾瑟姆,麻塞諸塞州,美國)透過體內螢光素酶活性測量,使用甲蟲螢光素鉀鹽160 mg/kg Ip注射,15分鐘之後,對成像前5分鐘用kétamine® /Xylazine®(120 mg/kg;6 mg/kg IM,5 ml/kg)麻醉的動物進行影像處理。腫瘤生長是基於生物發光信號曲線(以光子/秒表示)。Tumor growth was assessed by in vivo BLI on days 3, 7, 10, and 14 after tumor injection using an IVIS Lumina XRMS imager (PerkinElmer, Waltham, CA) with Living Image 4.5.2 acquisition software (PerkinElmer). Massachusetts, USA) by in vivo luciferase activity measurement using beetle luciferin potassium salt 160 mg/kg Ip injected 15 minutes later and kétamine®/Xylazine® (120 mg/ kg; 6 mg/kg IM, 5 ml/kg) anesthetized animals for imaging processing. Tumor growth is based on bioluminescence signal curves (expressed in photons/second).
在腫瘤植入後第7、10和14天,透過BLI信號測量,跟蹤全身和後腿長骨中的腫瘤生長。主要功效終點是處理組和對照組(T/C)、部分消退(PR)和完全消退(CR)之間腫瘤信號相對於基線變化的變化比率。Tumor growth was tracked throughout the body and in the long bones of the hind legs via BLI signal measurements on days 7, 10, and 14 after tumor implantation. The primary efficacy endpoint was the ratio of change from baseline in tumor signal between treatment and control (T/C), partial regression (PR), and complete regression (CR).
為每個處理組的每隻動物按時間繪製基於生物發光信號曲線(以光子/秒表示)的腫瘤生長,並表示為全身(線性標度)和骨分段信號(對數標度)的中值曲線 ± MAD。透過從指定觀察日的腫瘤信號中減去第一次處理那天(籌畫(staging)日)的腫瘤信號,計算每個處理(T{XE 「T」 \ f 縮寫 \ t 每隻處理組動物的生物發光信號})組和對照(C {XE 「C」 \ f 縮寫 \ t 每隻對照組動物的生物發光信號})組在每天每個動物的腫瘤生物發光信號變化。計算處理組的中值T,並且計算對照組的中值C。然後計算比率T/C並且以百分比表示:Tumor growth based on bioluminescence signal curves (expressed in photons/second) was plotted over time for each animal in each treatment group and expressed as the median of whole-body (linear scale) and bone segmental signal (logarithmic scale) Curve ± MAD. The tumor signal on the day of the first treatment (staging day) was calculated for each treatment (T{ Bioluminescence signal}) group and control (C { Calculate the median T for the treatment group, and calculate the median C for the control group. The ratio T/C is then calculated and expressed as a percentage:
dT/dC =[ (結束時中值T - 第3天中值T)/ (結束時中值C – 第3天中值C) ]x 100dT/dC =[ (Median value at end T - Median value T on day 3)/ (Median value at end C - Median value C on day 3) ]x 100
當dT/dC低於42%時,劑量被認為是有治療活性的,並且當dT/dC低於10%時,劑量被認為是非常有活性的。如果dT/dC低於0,則劑量被認為是有高度活性的,並且消退的百分比被記錄上日期:A dose is considered therapeutically active when the dT/dC is below 42%, and a dose is considered very active when the dT/dC is below 10%. If dT/dC is below 0, the dose is considered highly active and the percentage of resolution is recorded with a date:
腫瘤消退百分比被定義為與處理第一天的信號相比,在特定觀察日在處理組中腫瘤信號減少的%。Percent tumor regression was defined as the % reduction in tumor signal in the treatment group on a specific observation day compared to the signal on the first day of treatment.
對於每隻動物,在特定時間點計算消退%。考慮到由於螢光素動力學因錯過ip注射所致的可變性而導致的信號可變性的風險,當每隻動物的至少兩個連續時間點觀察到消退時,才視為真正的消退。For each animal, % extinction was calculated at specific time points. To account for the risk of signal variability due to variability in luciferin kinetics due to missed i.p. injections, true extinction was considered when extinction was observed for at least two consecutive time points per animal.
消退%(在t)= fade%(at t)=
部分消退(PR):如果在連續兩個時間點處的腫瘤信號(其中一個時間點處的信號低於起始信號的50%)降低到低於處理開始時的腫瘤信號,則將消退定義為部分消退。完全消退(CR):如果腫瘤信號降低到低於起始信號的80%,則定義完全消退。Partial regression (PR): Regression is defined as if the tumor signal at two consecutive time points (where the signal at one time point is less than 50% of the starting signal) decreases below the tumor signal at the start of treatment Partially subsided. Complete regression (CR): Complete regression is defined if the tumor signal decreases to less than 80% of the initial signal.
生物統計分析Biometric analysis
針對每個處理組的每隻動物,測量基於生物發光信號曲線(隨時間推移)的腫瘤生長。對於縱向體內BLI資料,按天以重複測量進行兩個非參數雙因素方差分析型(ANOVA型)、隨後為針對多重性用Bonferroni-Holm調整的兩個對比分析:p > 0.05: NS,0.05 < p > 0.01: * ,p < 0.01: **。對於末端離體BLI資料,對秩轉換(rank-transformed)的生物發光信號以因子群進行單因素方差分析。採用中值±中值絕對偏差的描述性統計按組和測量日提供:p > 0.05: NS,0.05 < p > 0.01: * ,p < 0.01: **。Tumor growth based on the bioluminescence signal curve (over time) was measured for each animal in each treatment group. For the longitudinal in vivo BLI data, two nonparametric two-way analyzes of variance (ANOVA) were performed with repeated measures by day, followed by two contrastive analyzes with Bonferroni-Holm adjustment for multiplicity: p > 0.05: NS, 0.05 < p > 0.01: * , p < 0.01: **. For the terminal ex vivo BLI data, a one-way ANOVA was performed on the rank-transformed bioluminescence signals with factor groups. Descriptive statistics using median ± median absolute deviation are provided by group and day of measurement: p > 0.05: NS, 0.05 < p > 0.01: *, p < 0.01: **.
6.5.26.5.2 結果result
在Molm-13-luc AML異種移植模型中,TCRαβ-CD33-CD123多特異性ISVD構築體在體內誘導抗白血病作用( 圖 8A)。 In the Molm-13-luc AML xenograft model, the TCRαβ-CD33-CD123 multispecific ISVD construct induced antileukemic effects in vivo ( Fig. 8A ).
在Molm-13-luc異種移植模型中,在人效應T細胞(T細胞/腫瘤比率R = 10)的存在下,每2天靜脈內投予的TCRαβ-CD33-CD123多特異性ISVD構築體在所有劑量下被良好耐受。在處理下沒有觀察到不良事件或體重改變的證據。TCRαβ-CD33-CD123多特異性ISVD構築體在所有測試劑量下以相同活性(在0.012;0.12;12和12 nmol/kg下,dT/dC分別為2%(p < 0.0001)與2%(p < 0.0001)、2%(p < 0.0001)和3%(p < 0.0001))抑制全身腫瘤生長( 圖 8A、 圖 8B)。 In the Molm-13-luc xenograft model, TCRαβ-CD33-CD123 multispecific ISVD constructs administered intravenously every 2 days in the presence of human effector T cells (T cell/tumor ratio R = 10) It was well tolerated at all doses. No adverse events or evidence of weight changes were observed under treatment. The TCRαβ-CD33-CD123 multispecific ISVD construct performed with the same activity at all doses tested (dT/dC of 2% (p < 0.0001) vs. 2% (p) at 0.012; 0.12; 12 and 12 nmol/kg, respectively. < 0.0001), 2% (p < 0.0001) and 3% (p < 0.0001)) inhibited systemic tumor growth ( Figure 8A , Figure 8B ).
所有標靶病變的最長直徑(LD)的總和為基線LD總和。基線LD總和用作表徵目標腫瘤反應的參考。The sum of the longest diameters (LD) of all target lesions is the sum of baseline LDs. The baseline LD sum was used as a reference to characterize target tumor response.
在長骨中,在0.012 nmol/kg下觀察到3/8完全反應(CR;所有病變消失)和1/8部分反應(PR;標靶病變的LD總和減少至少30%,將基線LD總和作為參考)。In long bones, 3/8 complete responses (CR; disappearance of all lesions) and 1/8 partial responses (PR; at least a 30% reduction in the sum of LD of target lesions) were observed at 0.012 nmol/kg, taking the sum of baseline LD as refer to).
在0.12 nmol/kg下觀察到3/8CR和1/8PR,在1.2 nmol/kg下觀察到4/8CR和3/8PR,並且在12 nmol/kg下觀察到3/7CR和3/7PR( 圖 8C)。參考TCR-ISVD構築體在1.2 nmol/kg下對Molm13-luc腫瘤生長是總體無活性的(dT/dC為80%)。CD123/CD3陽性對照1,3 nmol/kg抑制腫瘤生長,其中dT/dC為8%(NS相比於A025001562(TCR-CD33-CD123多特異性ISVD構築體,SEQ ID NO.: 1)處理),與長骨中的4/8 CR相關( 圖 8A 、圖 8B)。 3/8CR and 1/8PR were observed at 0.12 nmol/kg, 4/8CR and 3/8PR at 1.2 nmol/kg, and 3/7CR and 3/7PR at 12 nmol/kg ( Fig . 8C ). The reference TCR-ISVD construct was overall inactive against Molm13-luc tumor growth at 1.2 nmol/kg (dT/dC of 80%). CD123/CD3 positive control 1,3 nmol/kg inhibited tumor growth with dT/dC of 8% (NS vs. A025001562 (TCR-CD33-CD123 multispecific ISVD construct, SEQ ID NO.: 1) treatment) , associated with 4/8 CR in long bones ( Fig. 8A , Fig. 8B ).
基於末端離體生物發光成像,當參考ISVD TCR-HLE在所有組織中均無活性時,TCRαβ-CD33-CD123多特異性ISVD構築體在所有測試劑量下均顯著抑制肝臟(p < 0.0001)、脾臟(p < 0.0001)和卵巢(p < 0.0001)中的腫瘤生長,但在腹部脂肪中並非如此,並且CD123/CD3陽性對照顯著抑制肝臟(p < 0.0001)和脾臟(p < 0.0001)中的腫瘤負荷,但在卵巢(NS)或腹部脂肪組織中並非如此。( 圖 9) Based on terminal ex vivo bioluminescence imaging, the TCRαβ-CD33-CD123 multispecific ISVD construct significantly inhibited liver (p < 0.0001), spleen at all doses tested, while the reference ISVD TCR-HLE was inactive in all tissues. Tumor growth in the liver (p < 0.0001) and ovary (p < 0.0001), but not in abdominal fat, and CD123/CD3 positive control significantly suppressed tumor burden in the liver (p < 0.0001) and spleen (p < 0.0001) , but not in ovary (NS) or abdominal adipose tissue. ( Figure 9 )
6.66.6 實例Example 66 :: TT 細胞介導的人靶細胞殺傷Cell-mediated killing of human target cells
6.6.16.6.1 材料和方法Materials and methods
在基於流式細胞術的細胞毒性測定中,使用人原代T細胞作為效應細胞以及非黏附性標靶細胞,針對重定向T細胞介導的殺傷來表徵ISVD構築體。根據製造商的說明,使用PKH26紅色螢光細胞連接子試劑盒(Sigma,PKH26GL-1KT)用4 µM PKH-26膜染料標記CD123和/或CD33陽性標靶細胞(MOLM-13、DSMZ ACC 554、U-937、ATCC® CRL1593.2和KG-1a,ATCC® CCL246.1™)。將效應細胞(2.5 x 10 5個細胞/孔)和PKH標記的標靶細胞(2.5 x 10 4個細胞/孔)在96孔V型底板(Greiner Bio-one,# 651 180)中在標靶細胞株的測定培養基(不具有抗生素的標靶生長培養基)中共同培育(效應物與標靶比率為10:1)。為了分析濃度依賴性細胞裂解,將標靶測定培養基中化合物的系列稀釋物添加到細胞中,並且在37ºC在5% CO2環境中培育18 h。培育後,透過離心使細胞沈澱並且用FACS緩衝液(來自Gibco的D-PBS,具有來自Sigma的10% FBS和來自Merck的0.05%疊氮化鈉)洗滌。隨後,將細胞重新懸浮在補充有5 nM TO-PRO®-3碘化物(642⁄661)(ThermoFisher Scientific,T3605)的FACS緩衝液中,以區分活細胞和死細胞。使用FACS陣列流式細胞儀(BD Biosciences)分析細胞。每個樣品採集的總樣品體積為80 µL。對PKH26陽性細胞設置門控,並在該群體中測定TO-PRO®-3陽性細胞。特異性裂解百分比 =((% TO-PRO®-3 +無ISVD – % TO-PRO®-3 +有ISVD)/ (% TO-PRO®-3 +無ISVD))x100。 ISVD constructs were characterized for redirecting T cell-mediated killing in a flow cytometry-based cytotoxicity assay using human primary T cells as effector cells and non-adherent target cells. CD123- and/or CD33-positive target cells (MOLM-13, DSMZ ACC 554, U-937, ATCC® CRL1593.2 and KG-1a, ATCC® CCL246.1™). Effector cells (2.5 x 10 cells/well) and PKH-labeled target cells (2.5 x 10 cells/well) were plated in a 96-well V-bottom plate (Greiner Bio-one, #651 180) on target cells. Cell lines were cocultured in assay medium (targeted growth medium without antibiotics) (effector to target ratio 10:1). To analyze concentration-dependent cell lysis, serial dilutions of compounds in target assay medium were added to cells and incubated for 18 h at 37ºC in 5% CO2. After incubation, cells were pelleted by centrifugation and washed with FACS buffer (D-PBS from Gibco with 10% FBS from Sigma and 0.05% sodium azide from Merck). Subsequently, cells were resuspended in FACS buffer supplemented with 5 nM TO-PRO®-3 Iodide (642⁄661) (ThermoFisher Scientific, T3605) to differentiate between live and dead cells. Cells were analyzed using a FACS array flow cytometer (BD Biosciences). The total sample volume collected per sample was 80 µL. Set a gate for PKH26-positive cells and measure TO-PRO®-3-positive cells within this population. Percent specific lysis = ((% TO-PRO®-3 + no ISVD – % TO-PRO®-3 + with ISVD)/ (% TO-PRO®-3 + no ISVD))x100.
將根據本發明的多特異性TCRαβ-CD33-CD123 ISVD構築體與相應的構築體進行比較,在相應的構築體中CD33結合ISVD或CD123結合ISVD被不相關ISVD IRR(不與CD33結合並且不與CD123結合; 表 23)以及CD123/CD3陽性對照和CD33/CD3陽性對照替代。結果示於 圖 10 、圖 11 和圖 12中。 Multispecific TCRαβ-CD33-CD123 ISVD constructs according to the invention are compared with corresponding constructs in which CD33-binding ISVD or CD123-binding ISVD are replaced by irrelevant ISVD IRR (does not bind to CD33 and does not bind to CD123 binding; Table 23 ) and CD123/CD3 positive control and CD33/CD3 positive control substitutions. The results are shown in Figure 10 , Figure 11 and Figure 12 .
6.6.26.6.2 結果result
如可以在 圖 10中觀察到的,在MOLM-13細胞中,所有測試的化合物均觸發腫瘤細胞殺傷(這是預期的),因為MOLM-13細胞是CD123和CD33兩者陽性的。在ISVD構築體中,雙重靶向形式(CD33/CD123 TCE)具有最有效的腫瘤細胞殺傷作用。 As can be observed in Figure 10 , in MOLM-13 cells, all compounds tested triggered tumor cell killing (which was expected) since MOLM-13 cells are positive for both CD123 and CD33. Among ISVD constructs, the dual-targeting form (CD33/CD123 TCE) has the most potent tumor cell killing effect.
U-937和KG-1a細胞中的殺傷效力和裂解百分比描繪於 表 24以及 圖 11 和圖 12中。 Killing potency and lysis percentage in U-937 and KG-1a cells are depicted in Table 24 and Figures 11 and 12 .
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TCR-CD123單一靶向ISVD幾乎不誘導CD123- U-937細胞的殺傷,這對於CD123/CD3陽性對照也觀察到。類似地,CD33單一靶向ISVD僅誘導低水平的CD33-/+ KG-1a細胞殺傷,這對於CD33/CD3陽性對照也觀察到。另一方面,雙重靶向TCRαβ-CD33-CD123 ISVD(構築體A)對CD33-和CD123-細胞株二者均展現出有效的腫瘤細胞殺傷,從而例證了雙重靶向方法的優勢。TCR-CD123 single-targeting ISVD induced almost no killing of CD123-U-937 cells, which was also observed for the CD123/CD3 positive control. Similarly, CD33 single-targeting ISVD induced only low levels of CD33-/+ KG-1a cell killing, which was also observed for the CD33/CD3 positive control. On the other hand, the dual-targeting TCRαβ-CD33-CD123 ISVD (Construct A) demonstrated effective tumor cell killing against both CD33- and CD123- cell lines, thus exemplifying the advantages of the dual-targeting approach.
6.76.7 實例Example 77 :細胞激素釋放測定: Cytokine release assay
由於細胞激素釋放症候群(CRS)是T細胞接合器(engager)的已知副作用,因此在自體健康供體PBMC測定中測定根據本發明的TCRαβ-CD33-CD123多特異性ISVD構築體的細胞激素釋放特徵。平行地,評價了人PBMC內單核細胞的自體耗竭。將根據本發明的ISVD的功能性與以下2個工具分子進行比較:CD123/CD3陽性對照和CD33/CD3陽性對照。將非靶向T細胞接合器(TCE)ISVD作為陰性對照。Since cytokine release syndrome (CRS) is a known side effect of the T cell engager, cytokines according to the TCRαβ-CD33-CD123 multispecific ISVD construct of the present invention were determined in an autologous healthy donor PBMC assay. Release features. In parallel, autologous depletion of monocytes within human PBMCs was evaluated. The functionality of the ISVD according to the invention was compared with the following 2 tool molecules: CD123/CD3 positive control and CD33/CD3 positive control. Non-targeting T cell engager (TCE) ISVD was used as a negative control.
6.7.16.7.1 材料和方法Materials and methods
將使用含有Lymphoprep TM溶液的Leucosep TM管從全血中分離的總共200 000個PBMC(100 µL,在培養基中2 x 10 6個細胞/mL)轉移到96孔V型底透明孔板(Greiner CELLSTAR® 96孔板;651 180)中。 A total of 200 000 PBMCs (100 µL, 2 x 10 cells/mL in culture medium) isolated from whole blood using Leucosep TM tubes containing Lymphoprep TM solution were transferred to a 96-well V-bottom clear well plate (Greiner CELLSTAR ® 96-well plate; 651 180).
接下來,將50 µL待測試化合物的系列稀釋物或用於空孔的50 µL培養基添加到孔中。Next, add 50 µL of serial dilutions of the compound to be tested or 50 µL of medium for empty wells to the wells.
將含有經處理的PBMC的培養板在37ºC、5% CO2下培育20 h。過夜(20 h)培育後,將PBMC以300 g離心2 min。收集上清液並且將其轉移到新的96孔儲存板上,在-20ºC下冷凍用於細胞激素測量。將細胞沈澱物懸浮在100 μL冷FACS緩衝液中,並且用100 µL FACS緩衝液洗滌1次。Culture plates containing treated PBMC were incubated at 37ºC, 5% CO2 for 20 h. After overnight (20 h) incubation, PBMC were centrifuged at 300 g for 2 min. Supernatants were collected and transferred to new 96-well storage plates and frozen at -20ºC for cytokine measurements. The cell pellet was suspended in 100 μL of cold FACS buffer and washed once with 100 μL of FACS buffer.
之後,將PBMC在4ºC下以300 g離心2 min。棄去上清液,並且將細胞重新懸浮在30 µL稀釋的Fc嵌段(在FACS緩衝液中1/200)(BD,564220)中,並且在室溫下培育10分鐘。Afterwards, centrifuge the PBMC at 300 g for 2 min at 4ºC. Discard the supernatant and resuspend cells in 30 µL of diluted Fc block (1/200 in FACS buffer) (BD, 564220) and incubate for 10 minutes at room temperature.
接下來,將30 µL(2X)抗體染色混合物(CD123、HLA-DR和CD14抗體)添加到PBMC懸浮液中,並且在黑暗中在4ºC下培育30分鐘。Next, add 30 µL (2X) of the antibody staining mix (CD123, HLA-DR, and CD14 antibodies) to the PBMC suspension and incubate in the dark at 4ºC for 30 minutes.
然後,將細胞懸浮液洗滌2次,並且重新懸浮在50 µL稀釋的TO-PRO™-3碘化物中。將板在MACSQuantX上讀取。讀出是透過流式細胞術檢測的每個子集的活細胞數。透過SSC %CD14+對單核細胞進行定量( 圖 13)。 The cell suspension was then washed 2 times and resuspended in 50 µL of diluted TO-PRO™-3 iodide. Read the plate on MACSQuantX. The readout is the number of viable cells in each subset detected by flow cytometry. Quantification of monocytes by SSC %CD14+ ( Figure 13 ).
將來自過夜培育的人PBMC的冷凍上清液用於使用來自Bio-rad的多重珠測定測量包括IL-2、IL-6、IFNγ、TNFα的一組細胞激素。根據製造商的指南進行測定。使用Luminex FlexMAP 3D系統獲取來自反應的資料( 圖 14)。 Frozen supernatants from overnight cultured human PBMC were used to measure a panel of cytokines including IL-2, IL-6, IFNγ, TNFα using a multiplex bead assay from Bio-rad. Assays were performed according to the manufacturer's guidelines. Use the Luminex FlexMAP 3D system to acquire data from the reaction ( Figure 14 ).
6.7.26.7.2 結果result
TCRαβ-CD33-CD123多特異性ISVD構築體誘導所有供體中與細胞激素產生相關的單核細胞的耗竭。非靶向TCE沒有顯示任何殺傷或細胞激素釋放(參見 圖 13)。 圖 13中所示的資料是來自1名供體的資料,其代表提供PBMC的所有6名供體的數據。 The TCRαβ-CD33-CD123 multispecific ISVD construct induced depletion of monocytes associated with cytokine production in all donors. Non-targeting TCE did not show any killing or cytokine release (see Figure 13 ). The data shown in Figure 13 are from 1 donor and represent data from all 6 donors who provided PBMC.
此外,與CD123/CD3對照化合物相比,由根據本發明的ISVD構築體誘導的細胞激素的效價和最高水平均顯著更低。與CD33/CD3對照相比,由根據本發明的ISVD構築體誘導的IL-6和TNFα產生是相當的。儘管IL-2和IFNγ的水平高於CD33/CD3對照,但是其水平仍是可接受的。Furthermore, both the potency and the maximum level of cytokines induced by the ISVD constructs according to the invention were significantly lower compared to the CD123/CD3 control compound. The production of IL-6 and TNFα induced by the ISVD constructs according to the invention was comparable compared to the CD33/CD3 control. Although the levels of IL-2 and IFNγ were higher than the CD33/CD3 control, they were still acceptable.
基於此,可以得出結論,與其他CD123或CD33靶向化合物相比,根據本發明的ISVD構築體不具有更高的誘導CRS的風險,並且用於人應該是安全的。Based on this, it can be concluded that the ISVD construct according to the invention does not have a higher risk of inducing CRS compared to other CD123 or CD33 targeting compounds and should be safe for use in humans.
6.86.8 實例Example 88 :離體原代: Isolated primary AMLAML 細胞殺傷測定Cell killing assay
6.8.16.8.1 材料和方法Materials and methods
如下測試由CD33/CD3陽性對照介導的AML母細胞的裂解:在離體共培養系統中使用來自具有初步診斷或復發的患者的AML樣品,而不添加任何其他細胞。因此,E:T比率由原代AML樣品內殘留的T細胞的數量確定。來自AML患者的全血樣品由馬賽(La Conception,AP-HM)或蒙彼利埃的公立醫院或中心實驗室提供。Lysis of AML blasts mediated by CD33/CD3 positive controls was tested as follows: AML samples from patients with primary diagnosis or relapse were used in an ex vivo co-culture system without the addition of any other cells. Therefore, the E:T ratio is determined by the number of remaining T cells within the primary AML sample. Whole blood samples from AML patients were provided by public hospitals or central laboratories in Marseille (La Conception, AP-HM) or Montpellier.
首先,每50 mL管分配1 mL全血樣品,並且添加40 mL(1x)紅血球裂解緩衝液,並且在室溫下培育10分鐘。培育後,將沈澱物用PBS(Eurobio CS1PBS01-01)洗滌,並且重新懸浮在1 mL培養基(RPMI(Eurobio目錄號CM1RPM00-01)、FCS 10%(Sigma目錄號F2442-500ml 17L484)、非必需胺基酸1%(Eurobio目錄號CSTAAN00)、麩醯胺酸1%(Eurobio目錄號CSTGLU00)、丙酮酸鈉1%(Eurobio目錄號CSTVAT00)、青黴素/鏈黴素(Eurobio目錄號CABPES01))中。First, dispense 1 mL of whole blood sample per 50 mL tube and add 40 mL (1x) red blood cell lysis buffer and incubate at room temperature for 10 minutes. After incubation, the pellet was washed with PBS (Eurobio CS1PBS01-01) and resuspended in 1 mL of medium (RPMI (Eurobio Catalog No. CM1RPM00-01), FCS 10% (Sigma Catalog No. F2442-500ml 17L484), Optional Amine Amino acid 1% (Eurobio catalog number CSTAAN00), Glutamic acid 1% (Eurobio catalog number CSTGLU00), Sodium pyruvate 1% (Eurobio catalog number CSTVAT00), Penicillin/Streptomycin (Eurobio catalog number CABPES01)).
接下來,在存在1 mL(2x)飽和濃度的根據本發明的TCRαβ-CD33-CD123多特異性ISVD構築體(CD33/CD123 TCE)、陽性對照(CD33/CD3或CD123/CD3)或陰性對照(非靶向TCE)的情況下的6孔板中,將300 µL AML母細胞添加到每孔700 µL培養基中,並且在37ºC、5% CO 2下培育。培育4天後,收穫細胞並且將細胞用PBS洗滌1次。 Next, in the presence of 1 mL (2x) saturating concentration of TCRαβ-CD33-CD123 multispecific ISVD construct according to the invention (CD33/CD123 TCE), positive control (CD33/CD3 or CD123/CD3) or negative control ( In the case of non-targeting TCE), add 300 µL of AML blasts to 700 µL of culture medium per well in a 6-well plate and incubate at 37ºC, 5% CO2 . After 4 days of incubation, cells were harvested and washed once with PBS.
接下來,將Zombie紫存活率標記物(在PBS中1/100稀釋)添加到細胞沈澱物中,並且在黑暗中在室溫下培育5分鐘。Next, Zombie purple viability marker (diluted 1/100 in PBS) was added to the cell pellet and incubated in the dark at room temperature for 5 minutes.
然後,將細胞洗滌並且用抗體混合物(CD45、CD33、CD34、CD38、CD14、CD123、CD11抗體)染色,並且在冰上培育10分鐘。The cells were then washed and stained with a cocktail of antibodies (CD45, CD33, CD34, CD38, CD14, CD123, CD11 antibodies) and incubated on ice for 10 minutes.
接下來,在4ºC下將細胞洗滌並且用1.5 mL PBS + 2%多聚甲醛固定30分鐘。30分鐘培育後,將多聚甲醛用9 mL稀釋劑稀釋。將數據在Cytoflex細胞儀上進行分析。結果示於 圖 15 至圖 17 中。 Next, cells were washed and fixed with 1.5 mL PBS + 2% paraformaldehyde for 30 min at 4ºC. After 30 minutes of incubation, dilute the paraformaldehyde with 9 mL of diluent. Data were analyzed on a Cytoflex cytometer. The results are shown in Figures 15 to 17 .
6.8.26.8.2 結果result
每個AML樣品中CD33或CD123陽性細胞的百分比示於 圖 16中。如可以觀察到的,所有患者均具有大量的CD33和CD123陽性細胞兩者。此外,AML患者具有廣泛疾病亞型。因此,AML樣品適合用於此測定。 The percentage of CD33 or CD123 positive cells in each AML sample is shown in Figure 16 . As can be observed, all patients had a large number of both CD33 and CD123 positive cells. In addition, AML patients have a wide range of disease subtypes. Therefore, AML samples are suitable for this assay.
在 圖 15中,示出了所有AML患者樣品中的AML胚細胞殺傷。每個點表示相對於陰性對照(非靶向TCE)歸一化的用根據本發明的ISVD或陽性對照之一處理後存活的胚細胞計數。 圖 17中突出顯示了幾個單獨患者的結果。 In Figure 15 , AML blast cell killing in all AML patient samples is shown. Each point represents the count of viable blasts normalized to the negative control (non-targeted TCE) after treatment with one of the ISVD according to the invention or the positive control. Results from several individual patients are highlighted in Figure 17 .
如可以觀察到的,與陽性對照相比,用根據本發明的ISVD處理的胚細胞的細胞存活率平均最低。所有患者的細胞均顯示出明顯的反應,儘管反應因患者而異。這表明根據本發明的ISVD能夠對CD123和CD33陽性腫瘤細胞進行靶向細胞殺傷。As can be observed, blasts treated with ISVD according to the invention had on average the lowest cell viability compared to the positive control. Cells from all patients showed a clear response, although responses varied from patient to patient. This indicates that the ISVD according to the present invention is capable of targeted cell killing of CD123 and CD33 positive tumor cells.
6.96.9 實例Example 99 :非人靈長類動物:Non-human primates (( NHPNHP )) 研究Research
在食蟹猴的研究中評價了根據本發明的TCRαβ-CD33-CD123多特異性ISVD構築體的藥物動力學(PK)、藥效學(PD)和非臨床安全性特徵。The pharmacokinetic (PK), pharmacodynamic (PD) and non-clinical safety profile of the TCRαβ-CD33-CD123 multispecific ISVD construct according to the invention was evaluated in a study with cynomolgus monkeys.
6.9.16.9.1 材料和方法Materials and methods
將根據本發明的ISVD構築體以單一劑量1小時連續靜脈內(IV)輸注投予總共4隻雄性食蟹猴,然後進行21天的觀察期。測定了ISVD的全身暴露和潛在毒性,並且評價了PD終點(免疫細胞評價)。研究設計示於 表 25中。 A total of 4 male cynomolgus monkeys were administered an ISVD construct according to the invention as a single dose as a 1 hour continuous intravenous (IV) infusion, followed by an observation period of 21 days. Systemic exposure and potential toxicity of ISVD were determined, and PD endpoints (immune cell assessment) were evaluated. The study design is shown in Table 25 .
表surface
2525
:研究設計:雄性食蟹猴中的探索性單一劑量: Study design: Exploratory single dose in male cynomolgus monkeys
IVIV
研究Research
6.9.26.9.2 安全性safety
ISVD構築體的單次1小時連續IV輸注對食蟹猴是良好耐受的。在研究歷程期間沒有死亡並且沒有與治療相關的臨床體徵。未觀察到與治療相關的體重變化和體溫變化。A single 1 hour continuous IV infusion of the ISVD construct was well tolerated by cynomolgus monkeys. There were no deaths and no treatment-related clinical signs during the course of the study. No treatment-related changes in body weight and body temperature were observed.
細胞激素評價僅顯示與以0.04 μg/kg單一劑量投予的ISVD構築體相關的非常微小的IL-6增加(在輸注開始後2小時和/或6小時出現峰值,並且在24小時內返回基線)。以0.04 μg/kg未觀察到IFN-γ、IL-1β、IL-2、IL-8和TNF-α水平的變化。IL-2、IL-6、IFN-γ和TNF-α非常微小至微小的增加(在輸注開始後2小時和/或6小時出現峰值,並且在24小時內返回基線)與以0.4 μg/kg單一劑量投予的ISVD構築體相關。以0.4 μg/kg,對於猴的IL-1β和IL-8水平未觀察到與根據本發明的TCR-CD33-CD123多特異性ISVD構築體相關的變化。Cytokine evaluation showed only a very minor increase in IL-6 associated with the ISVD construct administered at a single dose of 0.04 μg/kg (peaking at 2 and/or 6 hours after the start of infusion and returning to baseline within 24 hours ). No changes in IFN-γ, IL-1β, IL-2, IL-8, and TNF-α levels were observed at 0.04 μg/kg. Very small to minimal increases in IL-2, IL-6, IFN-γ, and TNF-α (peaking at 2 hours and/or 6 hours after the start of the infusion and returning to baseline within 24 hours) versus 0.4 μg/kg Correlates of ISVD constructs administered at a single dose. At 0.4 μg/kg, no changes related to the TCR-CD33-CD123 multispecific ISVD construct according to the invention were observed in monkey IL-1β and IL-8 levels.
因此,可以得出結論,根據本發明的ISVD構築體在此NHP模型中是良好耐受的。Therefore, it can be concluded that the ISVD construct according to the invention is well tolerated in this NHP model.
6.9.36.9.3 藥物動力學Pharmacokinetics
ISVD構築體1小時輸注後,在猴中以0.04 μg/kg多至3天和以0.4 μg/kg多至7天的血清水平是可定量的。總體而言,在0.04 μg/kg和0.4 μg/kg劑量水平下IV輸注後觀察到約0.07 L/天/kg的清除率。終末消除半衰期估計接近1天。從0.04至0.4 μg/kg,ISVD構築體暴露(AUC)的增加略小於按劑量比例所預期的,其中對於10倍的劑量增加,暴露增加7.7倍,這可能是由於在一隻猴(M3)中觀察到較低暴露。PK參數報告於 表 26中。 Following 1 hour infusion of the ISVD construct, serum levels were quantifiable in monkeys at 0.04 μg/kg up to 3 days and at 0.4 μg/kg up to 7 days. Overall, clearance of approximately 0.07 L/day/kg was observed following IV infusion at the 0.04 μg/kg and 0.4 μg/kg dose levels. The terminal elimination half-life is estimated to be approximately 1 day. The increase in ISVD construct exposure (AUC) from 0.04 to 0.4 μg/kg was slightly smaller than expected on a dose-proportional basis, with a 7.7-fold increase in exposure for a 10-fold increase in dose, possibly due to the increase in exposure in one monkey (M3) Lower exposure was observed in . PK parameters are reported in Table 26 .
表surface
26.TCRαβ-CD33-CD12326.TCRαβ-CD33-CD123
多特異性multispecific
ISVDISVD
構築體毒代動力學參數。Construct toxicokinetic parameters.
6.9.46.9.4 藥效學pharmacodynamics
將ISVD構築體以0.04和0.4 μg/kg的單一劑量IV輸注至食蟹猴在兩種劑量水平下均引起CD123+細胞群體和CD33+單核細胞的變化。這些變化由以下組成: - 從輸注開始後6小時開始,觀察到所有動物的總CD123+細胞數的總體減少。在整個研究過程中,所有動物都維持了這種下降。 - 從輸注開始後6小時開始(並且對於以0.04 μg/kg接受ISVD構築體的動物M1,直到第1天),觀察到所有動物的單核細胞CD33+細胞數的總體減少。在第1天觀察到動物M3完全恢復。 IV infusion of ISVD constructs into cynomolgus monkeys at single doses of 0.04 and 0.4 μg/kg induced changes in CD123+ cell populations and CD33+ monocytes at both dose levels. These changes consist of: - An overall decrease in total CD123+ cell numbers was observed in all animals starting 6 hours after the start of infusion. This decrease was maintained in all animals throughout the study. - An overall decrease in monocyte CD33+ cell numbers was observed in all animals starting 6 hours after the start of infusion (and for animal M1 receiving the ISVD construct at 0.04 μg/kg until day 1). Complete recovery of animal M3 was observed on day 1.
此外,從輸注開始後6小時開始,觀察到所有動物的CD4+和CD8+細胞數的總體減少。對於CD8+細胞,在第3天觀察到完全恢復,其中動物M4具有反彈效應。對於CD4+細胞,觀察到動物M4在第3天完全恢復。Furthermore, an overall decrease in CD4+ and CD8+ cell numbers was observed in all animals starting 6 hours after the start of infusion. For CD8+ cells, complete recovery was observed on day 3, with animal M4 having a rebound effect. For CD4+ cells, complete recovery on day 3 was observed for animal M4.
已經將細胞計數在 圖 18中視覺化。 Cell counts have been visualized in Figure 18 .
77 產業利用性Industrial applicability
本文所述的多肽、編碼所述多肽的核酸分子、包含所述核酸的載體和組成物可以用於例如患有急性骨髓性白血病的受試者的治療中。The polypeptides, nucleic acid molecules encoding the polypeptides, vectors and compositions comprising the nucleic acids described herein can be used, for example, in the treatment of subjects suffering from acute myelogenous leukemia.
無without
圖 1 :根據本發明的多特異性ISVD構築體的示意圖,從N末端到C末端顯示經由連接子連接的單價構築塊/ISVD TCRαβ、CD33、CD123和Alb。 Figure 1 : Schematic representation of a multispecific ISVD construct according to the invention, showing from N-terminus to C-terminus the monovalent building blocks/ISVD TCRαβ, CD33, CD123 and Alb connected via linkers.
圖 2 :單價CD33(左)和CD123結合BB(右)分別與人(上)或食蟹猴(下)轉染的CD33、CD123細胞的結合。 Figure 2 : Binding of monovalent CD33 (left) and CD123-bound BB (right) to human (top) or cynomolgus monkey (bottom) transfected CD33 and CD123 cells, respectively.
圖 3 :A025001562(TCR-CD33-CD123多特異性ISVD構築體,SEQ ID NO: 1)與人CD33和/或人CD123表現細胞的結合。 Figure 3 : Binding of A025001562 (TCR-CD33-CD123 multispecific ISVD construct, SEQ ID NO: 1) to human CD33 and/or human CD123 expressing cells.
圖 4 :在不存在(虛線曲線)或存在(實線曲線)臨床級HSA的情況下,A025001562(TCR-CD33-CD123多特異性ISVD構築體,SEQ ID NO: 1)(黑色方形)和參考TCR(灰色點)在競爭性測定中對原代T細胞的劑量依賴性抑制。 Figure 4 : A025001562 (TCR-CD33-CD123 multispecific ISVD construct, SEQ ID NO: 1) (black square) and reference in the absence (dashed curve) or presence (solid curve) of clinical grade HSA Dose-dependent inhibition of primary T cells by TCR (gray dots) in a competition assay.
圖 5 :在基於阻抗的測定(xCELLigence)中,在存在50 µM HSA的情況下,使用15比1的效應物與標靶比率,劑量依賴性人(上)或食蟹猴(下)T細胞介導的對相應物種CD33(左)或CD123(右)轉染細胞的殺傷。 Figure 5 : Dose-dependent human (top) or cynomolgus monkey (bottom) T cells in an impedance-based assay (xCELLigence) in the presence of 50 µM HSA using an effector to target ratio of 15 to 1 Mediated killing of cells transfected with CD33 (left) or CD123 (right) of the corresponding species.
圖 6 :在基於流式細胞術的測定中,使用10:1的效應物與標靶比率,劑量依賴性人(左)或食蟹猴(右)T細胞介導的MOLM-13細胞殺傷。將TO-PRO®-3陽性標靶細胞%相對於ISVD的濃度繪圖。 Figure 6 : Dose-dependent human (left) or cynomolgus monkey (right) T cell-mediated killing of MOLM-13 cells in a flow cytometry-based assay using an effector to target ratio of 10:1. Plot % TO-PRO®-3 positive target cells versus ISVD concentration.
圖 7 :在基於阻抗的測定(xCELLigence)中,使用15比1的效應物與標靶比率,劑量依賴性人T細胞介導的細胞殺傷。將培育32至35小時後的細胞指數(CI)相對於ISVD的濃度繪圖。 Figure 7 : Dose-dependent human T cell-mediated cell killing in an impedance-based assay (xCELLigence) using an effector to target ratio of 15 to 1. The cell index (CI) after 32 to 35 hours of incubation was plotted against the concentration of ISVD.
圖 8 :藉由體內生物發光成像得出的A025001562(TCR-CD33-CD123多特異性ISVD構築體,SEQ ID NO.: 1)對Molm13-luc AML腫瘤生長的抑制。 Figure 8 : Inhibition of Molm13-luc AML tumor growth by A025001562 (TCR-CD33-CD123 multispecific ISVD construct, SEQ ID NO.: 1) by in vivo bioluminescence imaging.
圖 9 :藉由離體生物發光成像得出的A025001562(TCR-CD33-CD123多特異性ISVD構築體,SEQ ID NO: 1)對Molm13-luc AML腫瘤生長的抑制。 Figure 9 : Inhibition of Molm13-luc AML tumor growth by A025001562 (TCR-CD33-CD123 multispecific ISVD construct, SEQ ID NO: 1) by ex vivo bioluminescence imaging.
圖 10 :在MOLM-13細胞中,與CD123和CD33陽性對照組相比,根據本發明的ISVD的劑量依賴性人T細胞介導的殺傷。 Figure 10 : Dose-dependent human T cell-mediated killing of ISVD according to the invention in MOLM-13 cells compared to CD123 and CD33 positive controls.
圖 11 :在KG-1a細胞中,與CD123和CD33陽性對照組相比,根據本發明的ISVD的劑量依賴性人T細胞介導的殺傷。 Figure 11 : Dose-dependent human T cell-mediated killing of ISVD according to the invention in KG-1a cells compared to CD123 and CD33 positive controls.
圖 12 :在U-937細胞中,與CD123和CD33陽性對照組相比,根據本發明的ISVD的劑量依賴性人T細胞介導的殺傷。 Figure 12 : Dose-dependent human T cell-mediated killing of ISVD according to the invention in U-937 cells compared to CD123 and CD33 positive controls.
圖 13 :在人外周血單核細胞(PBMC)中,與CD123和CD33陽性對照組以及陰性對照組(非靶向TCE)相比,根據本發明的ISVD的劑量依賴性單核細胞耗竭。 Figure 13 : Dose-dependent monocyte depletion of ISVD according to the invention in human peripheral blood mononuclear cells (PBMC) compared to CD123 and CD33 positive controls and a negative control group (non-targeted TCE).
圖 14 :使用一組不同的細胞激素,在健康供體的人PBMC中,與CD123和CD33陽性對照組以及陰性對照組(非靶向TCE)相比,根據本發明的ISVD的劑量依賴性細胞激素釋放。 A. IL-6。 B.IFNγ。 C.TNFα。 D.IL-2。 Figure 14 : Dose-dependent cellularity of ISVD according to the invention compared to CD123 and CD33 positive controls and negative control (non-targeted TCE) in human PBMC from healthy donors using a panel of different cytokines Hormone release. A.IL -6. B. IFNγ. C. TNFα. D. IL-2.
圖 15 :在所有測試的患者中,相比於CD33和CD123陽性對照,根據本發明的ISVD的AML胚細胞殺傷。 Figure 15 : AML blast killing by ISVD according to the invention compared to CD33 and CD123 positive controls in all patients tested.
圖 16 :描繪每個AML樣品的CD33或CD123陽性細胞百分比的散點圖。 Figure 16 : Scatter plot depicting the percentage of CD33 or CD123 positive cells for each AML sample.
圖 17 :具有廣泛疾病亞型的AML患者的原代胚細胞相對根據本發明的ISVD(與CD123和CD33陽性對照組以及陰性對照組相比)的細胞活力。 A.患者編號3。 B.患者編號4。 C.患者編號5。 Figure 17 : Cell viability of primary blasts from AML patients with broad disease subtypes relative to ISVD according to the invention (compared to CD123 and CD33 positive controls and negative controls). A. Patient number 3. B. Patient number 4. C. Patient number 5.
圖 18 :如在用根據本發明的ISVD處理的食蟹猴的外周血中測量的,總CD123+ T細胞( A)、單核細胞CD33+ 細胞( B)、CD4+ T細胞( C)和CD8+ T細胞( D)的單獨絕對細胞計數隨時間的變化。動物M1和M2接受0.04 μg/kg,而M3和M4接受0.4 μg/kg的單次1小時連續靜脈內輸注根據本發明的ISVD的溶液。 Figure 18 : Total CD123+ T cells ( A ), monocyte CD33+ cells ( B ), CD4+ T cells ( C ) and CD8+ T cells as measured in the peripheral blood of cynomolgus monkeys treated with ISVD according to the invention ( D ) Changes in individual absolute cell counts over time. Animals M1 and M2 received 0.04 μg/kg, while M3 and M4 received a single 1 hour continuous intravenous infusion of 0.4 μg/kg of a solution of the ISVD according to the invention.
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AU2022409733A1 (en) | 2024-08-01 |
MX2024007564A (en) | 2024-07-04 |
CO2024008570A2 (en) | 2024-08-08 |
EP4448574A1 (en) | 2024-10-23 |
WO2023111266A8 (en) | 2024-09-06 |
IL313552A (en) | 2024-08-01 |
KR20240122867A (en) | 2024-08-13 |
CA3242445A1 (en) | 2023-06-22 |
WO2023111266A1 (en) | 2023-06-22 |
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