TW202334433A - Virus-like particle stably expressed by animal cells as vaccine antigen against covid-19 and influenza virus - Google Patents

Virus-like particle stably expressed by animal cells as vaccine antigen against covid-19 and influenza virus Download PDF

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TW202334433A
TW202334433A TW111134790A TW111134790A TW202334433A TW 202334433 A TW202334433 A TW 202334433A TW 111134790 A TW111134790 A TW 111134790A TW 111134790 A TW111134790 A TW 111134790A TW 202334433 A TW202334433 A TW 202334433A
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蕭培文
楊聿智
葉怡均
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中央研究院
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Abstract

The disclosure provides an animal cell stably expressing a virus-like particle (VLP). The disclosure also provides a method for manufacturing a virus-like particle, a virus-like particle, a vaccine composition, a method for preventing viral infection, and a method for producing antibodies.

Description

以動物細胞穩定表達之類病毒顆粒作為抗COVID-19與流感病毒之疫苗抗原Using virus particles stably expressed in animal cells as vaccine antigens against COVID-19 and influenza viruses

本發明係關於疫苗。更特定言之,本發明係關於一種由動物細胞穩定表現之類病毒顆粒。The present invention relates to vaccines. More specifically, the present invention relates to virus-like particles stably expressed by animal cells.

使用蛋白質作為治療劑已由美國FDA批准且預計將顯著增長。然而,蛋白質藥物之製造依賴於高基因表現量。為了產生具有廣泛轉譯後修飾之蛋白質,哺乳動物及昆蟲細胞株似乎為最佳或最可接受的表現系統。另外,生產疫苗以快速應對新出現的感染性疾病,諸如COVID-19、2009 H1N1新型流感⋯等大流行性之能力,對於控制感染性疾病之爆發至關重要。The use of proteins as therapeutics has been approved by the US FDA and is expected to grow significantly. However, the manufacture of protein drugs relies on high gene expression. For the production of proteins with extensive post-translational modifications, mammalian and insect cell lines appear to be the best or most acceptable expression systems. In addition, the ability to produce vaccines to quickly respond to emerging infectious diseases, such as COVID-19, 2009 H1N1 new influenza... and other pandemics, is critical to controlling the outbreak of infectious diseases.

理想的疫苗必須具有高度的免疫原性,且在安全範圍內賦予消除性免疫力及感染防護力。因此,先進的疫苗應包含經結構設計之抗原,其在表面上呈現具有穩定結構之中和抗原決定位;遞輸系統,其促進抗原呈現細胞吸收疫苗;及佐劑活性,其經由與免疫受體結合而觸發保護性免疫反應( Koff 等人 , Sci Transl Med 13, 2021 )。除了目前使用的新開發的基因疫苗,諸如脂質奈米顆粒包覆之訊息核糖核酸 (mRNA-LNP)及攜帶抗原編碼之腺病毒載體之外,習知的基於去活病毒疫苗及蛋白質疫苗亦在開發中( Keech 等人 , N Engl J Med 383, 2320-2332, 2020 Richmond 等人 , Lancet 397, 682-694, 2021 Kuo 等人 , Sci Rep 10, 20085, 2020 Krammer, Nature 586, 516-527, 2020)。由於大規模病毒培養及不完全去活化的高風險,以及對先前暴露之普通感冒冠狀病毒預先存在之交叉免疫反應的威脅,基於病毒之疫苗在已開發國家尚未完全普及。蛋白質疫苗通常免疫原性偏低,需要適當的佐劑來活化免疫反應。類病毒顆粒(VLP)及奈米粒子平台再現病毒之顆粒特徵且增強抗原向淋巴組織的遞送及有利樹突細胞的吸收,在疫苗研究中亦有前景。 An ideal vaccine must be highly immunogenic and confer elimination immunity and infection protection within a safe range. Therefore, advanced vaccines should include structurally engineered antigens that present neutralizing epitopes with a stable structure on the surface; a delivery system that promotes uptake of the vaccine by antigen-presenting cells; and adjuvant activity that interacts with immune receptors. It binds to the body and triggers a protective immune response ( Koff et al. , Sci Transl Med 13 , 2021 ). In addition to the newly developed genetic vaccines currently in use, such as lipid nanoparticle-coated message ribonucleic acid (mRNA-LNP) and adenovirus vectors carrying antigen encoding, the conventional inactivated virus-based vaccines and protein vaccines are also in use. Under development ( Keech et al. , N Engl J Med 383, 2320-2332, 2020 ; Richmond et al. , Lancet 397, 682-694, 2021 ; Kuo et al. , Sci Rep 10, 20085, 2020 ; Krammer, Nature 586, 516 -527, 2020 ). Virus-based vaccines are not yet fully available in developed countries due to the high risk of large-scale viral culture and incomplete deactivation, as well as the threat of pre-existing cross-immune responses to previously exposed common cold coronaviruses. Protein vaccines generally have low immunogenicity and require appropriate adjuvants to activate immune responses. Virus-like particles (VLPs) and nanoparticle platforms reproduce the particle characteristics of viruses and enhance the delivery of antigens to lymphoid tissues and facilitate uptake by dendritic cells. They are also promising in vaccine research.

然而,通常必須在細胞株中快速共表現多個基因,才能夠實現快速、穩定及大規模生產。However, multiple genes must be rapidly co-expressed in cell lines to achieve rapid, stable and large-scale production.

本發明係關於一種用於快速、穩定及大規模生產病毒疫苗之表現系統。The present invention relates to a performance system for rapid, stable and large-scale production of viral vaccines.

本發明提供一種穩定表現類病毒顆粒之動物細胞,其包含用於定點重組嵌入一或多個VLP基因之誘導型表現卡匣。The present invention provides an animal cell that stably expresses virus-like particles, which contains an inducible expression cassette for site-directed recombination embedded with one or more VLP genes.

動物細胞可為人類細胞。動物細胞之實例包括但不限於昆蟲或哺乳動物細胞。哺乳動物細胞可來源於大鼠、小鼠、倉鼠、天竺鼠、兔、狗、貓、豬(諸如小型豬)、牛、馬、靈長類動物(諸如猴,包括食蟹獼猴)或人類。昆蟲細胞可以鱗翅目為例,其實例包括但不限於秋行軍蟲( Spodoptera frugiperda)、家蠶( Bombyx mori)、菸芽夜蛾( Heliothis virescens)、棉鈴蟲( Heliothis zea)、甘藍夜蛾( Mamestra brassicas)、鹽澤燈蛾( Estigmene acrea)及粉紋夜蛾( Trichoplusia ni)。 The animal cells may be human cells. Examples of animal cells include, but are not limited to, insect or mammalian cells. Mammalian cells may be derived from rats, mice, hamsters, guinea pigs, rabbits, dogs, cats, pigs (such as miniature pigs), cattle, horses, primates (such as monkeys, including macaques), or humans. Insect cells can be exemplified by Lepidoptera, and examples thereof include but are not limited to Spodoptera frugiperda , Bombyx mori , Heliothis virescens , Heliothis zea , Mamestra brassicas ), Estigmene acrea and Trichoplusia ni .

在本發明之一些實施例中,病毒為包膜病毒。包膜病毒之實例包括但不限於辛得比斯病毒(sindbis virus)、風疹病毒、黃熱病病毒、C型肝炎病毒、流感病毒、麻疹病毒、腮腺炎病毒、人類間質肺炎病毒、呼吸道融合病毒、水泡性口炎病毒、狂犬病病毒、漢坦病毒(Hantan virus)、克里米亞-剛果出血熱病毒(Crimean-Congo hemorrhagic fever virus)、裂谷熱病毒、冠狀病毒、SARS病毒、淋巴球性脈絡叢腦膜炎病毒 (lymphocytic choriomeningitis virus, LCM病毒)、人類T細胞白血病病毒、人類免疫缺陷病毒(HIV)、馬堡病毒(Marburg virus)、伊波拉病毒(Ebola virus)、人類疱疹病毒、痘瘡病毒及B型肝炎病毒。特別地,該病毒為冠狀病毒或流感病毒。在本發明之一個實施例中,該病毒為SARS-CoV-2 (COVID-19)或H5N2或H3N2流感病毒。In some embodiments of the invention, the virus is an enveloped virus. Examples of enveloped viruses include, but are not limited to, sindbis virus, rubella virus, yellow fever virus, hepatitis C virus, influenza virus, measles virus, mumps virus, human metapneumovirus, respiratory fusion virus , vesicular stomatitis virus, rabies virus, Hantan virus, Crimean-Congo hemorrhagic fever virus, Rift Valley fever virus, coronavirus, SARS virus, lymphocytic Choriomeningitis virus (LCM virus), human T-cell leukemia virus, human immunodeficiency virus (HIV), Marburg virus, Ebola virus, human herpes virus, pox virus and hepatitis B virus. In particular, the virus is a coronavirus or an influenza virus. In one embodiment of the invention, the virus is SARS-CoV-2 (COVID-19) or H5N2 or H3N2 influenza virus.

在本發明之一些實施例中,類病毒顆粒包含冠狀病毒結構蛋白或流感病毒結構蛋白。In some embodiments of the invention, the virus-like particles comprise coronavirus structural proteins or influenza virus structural proteins.

在本發明之一個實施例中,冠狀病毒結構蛋白為SARS-CoV-2之結構蛋白。在本發明之一些實施例中,SARS-CoV-2為SARS-CoV-2之Delta及Omicron變異體。如本文所揭示之冠狀病毒結構蛋白包含刺突蛋白(S)、膜蛋白(M)及包膜蛋白(E)。刺突蛋白之實例包括但不限於原生D614G刺突蛋白(SEQ ID NO: 6)、二脯胺酸突變刺突蛋白(2P-S) (SEQ ID NO: 8)、D614G-S突變刺突蛋白、Delta-or刺突蛋白(SEQ ID NO: 10)、Delta-GSAS-2P刺突蛋白(SEQ ID NO: 12)、Omicron-or刺突蛋白(SEQ ID NO: 14)、Omicron-GSAS-2P刺突蛋白(SEQ ID NO: 16)。在本發明之一個實施例中,冠狀病毒結構蛋白由選自SEQ ID NO: 7、9、11、13、15及17組成之群的DNA序列編碼。In one embodiment of the present invention, the coronavirus structural protein is the structural protein of SARS-CoV-2. In some embodiments of the invention, SARS-CoV-2 is a Delta and Omicron variant of SARS-CoV-2. Coronavirus structural proteins as disclosed herein include spike protein (S), membrane protein (M) and envelope protein (E). Examples of spike proteins include, but are not limited to, native D614G spike protein (SEQ ID NO: 6), diproline mutant spike protein (2P-S) (SEQ ID NO: 8), D614G-S mutant spike protein , Delta-or spike protein (SEQ ID NO: 10), Delta-GSAS-2P spike protein (SEQ ID NO: 12), Omicron-or spike protein (SEQ ID NO: 14), Omicron-GSAS-2P Spike protein (SEQ ID NO: 16). In one embodiment of the present invention, the coronavirus structural protein is encoded by a DNA sequence selected from the group consisting of SEQ ID NO: 7, 9, 11, 13, 15 and 17.

在本發明之一個實施例中,流感病毒結構蛋白為H5N2流感病毒(例如A/duck/Taiwan/01006/2015/H5N2)之結構蛋白。如本文所揭示之流感病毒結構蛋白包含血球凝集素(HA)、神經胺糖酸酶(NA)及基質蛋白(M1及M2)。在本發明之一些實施例中,H5蛋白如SEQ ID NO: 18中所示,且H5蛋白之密碼子如SEQ ID NO: 19中所示最佳化。在本發明之一些實施例中,N2蛋白如SEQ ID NO: 20中所示,且N2蛋白之密碼子如SEQ ID NO: 21中所示最佳化。在本發明之一個實施例中,流感病毒結構蛋白為H3N2流感病毒(例如A/Taiwan/083/2006/H3N2)之結構蛋白。在本發明之一些實施例中,M1蛋白如SEQ ID NO: 22中所示,且M1蛋白之密碼子如SEQ ID NO: 23中所示最佳化。在本發明之一些實施例中,M2蛋白如SEQ ID NO: 24中所示,且M1蛋白之密碼子如SEQ ID NO: 25中所示最佳化。In one embodiment of the present invention, the influenza virus structural protein is the structural protein of H5N2 influenza virus (eg, A/duck/Taiwan/01006/2015/H5N2). Influenza virus structural proteins as disclosed herein include hemagglutinin (HA), neuraminidase (NA) and matrix proteins (M1 and M2). In some embodiments of the invention, the H5 protein is as shown in SEQ ID NO: 18, and the codons of the H5 protein are optimized as shown in SEQ ID NO: 19. In some embodiments of the invention, the N2 protein is as shown in SEQ ID NO: 20, and the codons of the N2 protein are optimized as shown in SEQ ID NO: 21. In one embodiment of the present invention, the influenza virus structural protein is the structural protein of H3N2 influenza virus (eg, A/Taiwan/083/2006/H3N2). In some embodiments of the invention, the M1 protein is as shown in SEQ ID NO: 22, and the codons of the M1 protein are optimized as shown in SEQ ID NO: 23. In some embodiments of the invention, the M2 protein is as shown in SEQ ID NO: 24, and the codons of the M1 protein are optimized as shown in SEQ ID NO: 25.

在本發明之一個實施例中,動物細胞係藉由穩定轉染包含Flp/FRT重組系統之誘導型四環素誘導型啟動子-報導子或多西環素誘導型啟動子-報導子的目標卡匣及穩定表現之四環素抑制子卡匣;及經由與FLPe重組酶共轉染將目標卡匣及四環素誘導型啟動子-報導子卡匣進行基因交換以實現所有VLP基因之定點插入來建立。In one embodiment of the present invention, the animal cell line is stably transfected with a target cassette containing an inducible tetracycline-inducible promoter-reporter or a doxycycline-inducible promoter-reporter of the Flp/FRT recombinant system. and a stably expressed tetracycline repressor cassette; and was established by gene exchange of the target cassette and the tetracycline-inducible promoter-reporter cassette by co-transfection with FLPe recombinase to achieve site-specific insertion of all VLP genes.

在本發明之一些實施例中,誘導型表現卡匣包含四環素誘導型啟動子或多西環素誘導型啟動子。四環素誘導型啟動子之實例為CMV/TO啟動子。多西環素誘導型啟動子之實例包括但不限於花旗松毒蛾( Orgyia pseudotsugata)多衣殼核多角體病毒(OpMNPV)立即早期2 (IE2)及姬透目天蠶蛾( Antheraea pernyl) 肌動蛋白 A1之啟動子。 In some embodiments of the invention, the inducible expression cassette comprises a tetracycline-inducible promoter or a doxycycline-inducible promoter. An example of a tetracycline-inducible promoter is the CMV/TO promoter. Examples of doxycycline-inducible promoters include, but are not limited to, Orgyia pseudotsugata multicapsid nucleopolyhedrovirus (OpMNPV) immediate early 2 (IE2) and Antheraea pernyl actin A1 promoter.

在本發明之一些實施例中,動物細胞亦穩定表現四環素抑制子卡匣。In some embodiments of the invention, animal cells also stably express the tetracycline inhibitor cassette.

在本發明之一些實施例中,四環素抑制子卡匣包含四環素抑制子基因及由來源於豬鐵士古病毒1之自裂解2A肽連接之保米黴素S抗性基因。In some embodiments of the invention, the tetracycline suppressor cassette includes a tetracycline suppressor gene and a puminomycin S resistance gene linked by a self-cleaving 2A peptide derived from porcine Tieskovirus 1.

在本發明之一些實施例中,四環素抑制子卡匣為EF1a/eIF4g-pCI-TetR-P2A-BSR卡匣。In some embodiments of the invention, the tetracycline inhibitor cassette is an EF1a/eIF4g-pCI-TetR-P2A-BSR cassette.

本發明亦提供一種用於製造類病毒顆粒之方法,其包含培養如本文所述之動物細胞及收穫類病毒顆粒。The invention also provides a method for producing virus-like particles, comprising culturing animal cells as described herein and harvesting virus-like particles.

本發明亦提供一種類病毒顆粒,其藉由包含培養如本文所述之動物細胞及收穫類病毒顆粒之方法製造。The invention also provides a virus-like particle produced by a method comprising culturing animal cells as described herein and harvesting the virus-like particle.

本發明提供一種疫苗組合物,其包含免疫有效量之類病毒顆粒,該類病毒顆粒藉由包含培養如本文所述之動物細胞及收穫類病毒顆粒之方法製造。The present invention provides a vaccine composition comprising an immunologically effective amount of virus-like particles produced by a method comprising culturing animal cells as described herein and harvesting virus-like particles.

在另一實施例中,疫苗組合物進一步包含至少一種佐劑,諸如明礬、基於角鯊烯之水包油奈米乳液、MF59佐劑或AS03佐劑。In another embodiment, the vaccine composition further comprises at least one adjuvant, such as alum, squalene-based oil-in-water nanoemulsion, MF59 adjuvant or ASO3 adjuvant.

本發明提供一種用於預防個體受病毒感染的方法,包含向該個體投予疫苗組合物。本發明亦提供如本文所述之疫苗組合物的用途,其用於製造供預防個體被病毒感染所需要用的藥物。The present invention provides a method for preventing viral infection in an individual, comprising administering a vaccine composition to the individual. The invention also provides the use of a vaccine composition as described herein for the manufacture of a medicament for use in preventing infection by a virus in an individual.

在本發明之一些實施例中,病毒感染為冠狀病毒感染或流感病毒感染。特別地,病毒感染為SARS-CoV-2感染或H5N2或H3N2流感病毒感染。In some embodiments of the invention, the viral infection is a coronavirus infection or an influenza virus infection. In particular, the viral infection is a SARS-CoV-2 infection or an H5N2 or H3N2 influenza virus infection.

在本發明之一些實施例中,VLP之投予係為了預防病毒複製或緩解由病毒感染引起的症狀。In some embodiments of the invention, VLPs are administered to prevent viral replication or alleviate symptoms caused by viral infection.

本發明亦提供一種用於產生抗體之方法,其包含向個體投予與疫苗組合物且收穫對VLP具有特異性的抗體。本發明亦提供如本文所述之疫苗組合物的用途,其用於製造供個體產生對VLP具有特異性之抗體所需要用的藥物。The invention also provides a method for generating antibodies, comprising administering a vaccine composition to an individual and harvesting antibodies specific for VLPs. The invention also provides the use of a vaccine composition as described herein for the manufacture of a medicament required for an individual to produce antibodies specific for a VLP.

藉由參考以下對本發明之各種實施例之詳細描述、實例以及化學圖及表及其相關描述,可更容易地理解本發明。亦應理解,本文所用之術語僅出於描述特定實施例之目的且不意欲為限制性的。The present invention may be more readily understood by reference to the following detailed description, examples, and chemical diagrams and tables of various embodiments of the invention and their associated descriptions. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only and is not intended to be limiting.

如根據本發明所利用,除非另外規定,否則以下術語應理解為具有以下含義:As utilized in accordance with the present invention, unless otherwise specified, the following terms shall be understood to have the following meanings:

如本文所用,除非另外說明,否則「或」之使用意謂「及/或」。在多重附屬項之情況下,使用「或」僅以替代之方式重新提及超過一個前述獨立項或附屬項。As used herein, the use of "or" means "and/or" unless stated otherwise. In the case of multiple dependencies, the use of "or" merely serves to refer alternatively to more than one of the preceding independent or subordinate terms.

必須注意,除非上下文另外明確指示,否則如本說明書及隨附申請專利範圍中所用,單數形式「一」及「該」包括複數個指示物。因此,除非上下文另有要求,否則單數術語應包括複數且複數術語應包括單數。It must be noted that, as used in this specification and the accompanying patent claims, the singular forms "a", "a" and "the" include plural referents unless the context clearly dictates otherwise. Therefore, unless the context otherwise requires, singular terms shall include the plural and plural terms shall include the singular.

如本文所用,術語「視情況(optional/optionally)」意謂隨後描述的事件或情形可能發生或可能不發生,且該描述包括該事件或情形發生的實例及不發生的實例。舉例而言,片語「視情況包含藥劑」意謂該藥劑可能存在或可能不存在。As used herein, the term "optional/optionally" means that the subsequently described event or circumstance may or may not occur, and that the description includes instances in which the event or circumstance occurs and instances in which it does not occur. For example, the phrase "optionally a pharmaceutical agent" means that the pharmaceutical agent may or may not be present.

如本文所用,表述「穩定表現(stable expression/stably expressing)」欲意謂正在穩定表現及/或永久且穩定地整合於宿主細胞之基因體中的遺傳物質,且因此隨時間推移具有與宿主細胞之原生遺傳物質相同的表現潛力。As used herein, the expression "stable expression (stably expressing)" is intended to mean genetic material that is being stably expressed and/or permanently and stably integrated into the genome of a host cell, and therefore has characteristics consistent with that of the host cell over time. The same performance potential as the native genetic material.

如本文所用,術語「類病毒顆粒」係指類似於病毒顆粒之結構。此外,根據本發明之類病毒顆粒為不具複製性及不具感染性的,因為其缺乏病毒基因體之全部或部分,特別是病毒基因體之複製性及感染性組分。根據本發明之類病毒顆粒可含有不同於其基因體之核酸。根據本發明之類病毒顆粒之典型及較佳實施例為病毒衣殼,諸如相應的病毒、噬菌體或RNA噬菌體之病毒衣殼。如本文可互換使用之術語「病毒衣殼」或「衣殼」係指由病毒蛋白次單元構成之大分子組裝體。通常且較佳地,病毒蛋白次單元分別組裝成具有固有重複組織之結構的病毒衣殼及衣殼,其中該結構通常為球形或管狀。舉例而言,RNA噬菌體之衣殼具有二十面體對稱之球形形式。如本文所用,術語「衣殼樣結構」係指由病毒蛋白次單元構成之大分子組裝體,以先前定義的意義重新組裝衣殼形態,但偏離典型的對稱組裝,同時保持足夠程度的秩序及重複性。As used herein, the term "virion-like particle" refers to a structure similar to a virus particle. Furthermore, viral particles according to the invention are non-replicative and non-infectious since they lack all or part of the viral genome, in particular the replicative and infectious components of the viral genome. Viral particles according to the invention may contain nucleic acids that are different from their genome. Typical and preferred embodiments of such viral particles according to the invention are viral capsids, such as those of corresponding viruses, bacteriophages or RNA bacteriophages. The terms "viral capsid" or "capsid" as used interchangeably herein refer to a macromolecular assembly composed of viral protein subunits. Typically and preferably, viral protein subunits are assembled respectively into viral capsids and capsids with an intrinsic repetitively organized structure, where the structure is usually spherical or tubular. For example, the capsids of RNA bacteriophages have a spherical form with icosahedral symmetry. As used herein, the term "capsid-like structure" refers to a macromolecular assembly composed of viral protein subunits that reassembles capsid morphology in the previously defined sense but deviates from typical symmetrical assembly while maintaining a sufficient degree of order and Repeatability.

在本發明之一個實施例中,類病毒顆粒為病毒結構蛋白之多聚體,較佳病毒外殼蛋白及/或病毒包膜蛋白之多聚體,其不包含多核苷酸,但在其他方面具有病毒的特性,例如與細胞表面受體結合、與受體一起內化、在血液中穩定及/或包含糖蛋白等。In one embodiment of the invention, the virus-like particle is a multimer of viral structural proteins, preferably a multimer of viral coat protein and/or viral envelope protein, which does not contain polynucleotides, but has in other aspects Characteristics of the virus, such as binding to cell surface receptors, being internalized with receptors, being stable in the blood, and/or containing glycoproteins.

術語「病毒結構蛋白」在本發明之上下文中用於指病毒外殼蛋白或病毒包膜糖蛋白。The term "viral structural protein" is used in the context of the present invention to refer to viral coat protein or viral envelope glycoprotein.

如本文所用,術語「細胞株」係指可繼代(分裂)超過一次的培養細胞。本發明係關於可繼代超過2次、多達200次或更多且包括其間的任何整數的細胞株。As used herein, the term "cell line" refers to cultured cells that can be passaged (divided) more than once. The present invention relates to cell lines that can be passaged more than 2 times, up to 200 times or more, including any integer therebetween.

術語「轉染」係指將核酸分子,諸如DNA或RNA (例如mRNA)分子引入細胞中,較佳引入動物細胞中。在本發明之上下文中,術語「轉染」涵蓋此項技術中已知的用於將核酸分子引入細胞中,較佳引入動物細胞中,諸如引入哺乳動物細胞中的任何方法。此類方法涵蓋例如電穿孔、例如基於陽離子脂質及/或脂質體之脂轉染、磷酸鈣沈澱、基於奈米粒子之轉染、基於病毒之轉染或基於陽離子聚合物(諸如DEAE-聚葡萄糖或聚乙烯亞胺及其他)之轉染。較佳地,引入為非病毒性的。The term "transfection" refers to the introduction of nucleic acid molecules, such as DNA or RNA (eg, mRNA) molecules into cells, preferably into animal cells. In the context of the present invention, the term "transfection" encompasses any method known in the art for introducing nucleic acid molecules into cells, preferably into animal cells, such as into mammalian cells. Such methods include, for example, electroporation, lipofection, for example, based on cationic lipids and/or liposomes, calcium phosphate precipitation, transfection based on nanoparticles, transfection based on viruses or based on cationic polymers such as DEAE-polydextrose. or polyethylenimine and others) transfection. Preferably, introduction is non-viral.

如本文所用,術語「表現卡匣」係指含有所需編碼序列及在特定宿主生物體中表現可操作地連接之編碼序列所必需的適當核酸序列之重組DNA分子。已知真核細胞利用啟動子、強化子以及終止及聚腺苷酸化信號。As used herein, the term "expression cassette" refers to a recombinant DNA molecule containing the desired coding sequence and the appropriate nucleic acid sequences necessary for the expression of the operably linked coding sequence in a particular host organism. Eukaryotic cells are known to utilize promoters, enhancers, and termination and polyadenylation signals.

術語「預防(preventing/prevention)」在此項技術中為公認的,且當相對於病況使用時,其包括在病況發作之前投予藥劑以相對於未接受該藥劑之個體,降低個體之醫學病況之症狀的頻率或嚴重程度或延遲其發作。The term "preventing/prevention" is recognized in the art, and when used with respect to a condition, it includes the administration of an agent before the onset of the condition to reduce the medical condition in an individual relative to an individual who does not receive the agent. the frequency or severity of symptoms or delaying their onset.

如本文所用,術語「個體」表示任何動物,較佳哺乳動物,且更佳人類。個體之實例包括人類、非人類靈長類動物、嚙齒動物、天竺鼠、兔、綿羊、豬、山羊、牛、馬、狗及貓。As used herein, the term "individual" means any animal, preferably a mammal, and more preferably a human. Examples of individuals include humans, non-human primates, rodents, guinea pigs, rabbits, sheep, pigs, goats, cattle, horses, dogs, and cats.

如本文所用,術語「免疫有效量」係指當引入個體中時足以誘導該個體之免疫反應之組合物的量。免疫有效所需之組合物的量根據許多因素而變化,包括組合物、組合物中其他組分(例如佐劑)之存在、抗原、免疫途徑、個體、先前免疫或生理狀態等。As used herein, the term "immunologically effective amount" refers to an amount of a composition that, when introduced into an individual, is sufficient to induce an immune response in the individual. The amount of a composition required for immunization to be effective will vary depending on many factors, including the composition, the presence of other components in the composition (eg, adjuvants), the antigen, the route of immunization, the individual, previous immune or physiological state, and the like.

如本文所用,術語「佐劑」係指免疫反應之非特異性刺激劑或允許在宿主中產生儲存物之物質,其在與本發明之組合物組合時提供甚至更增強及/或延長的免疫反應,較佳細胞介素產生。多種佐劑為此項技術中已知且可用於本發明。較佳佐劑係選自由以下組成之群:不完全弗氏佐劑、含鋁佐劑、改質胞壁醯二肽、表面活性物質諸如溶血卵磷脂、普洛尼克多元醇、聚陰離子、肽、油乳劑、匙孔血藍蛋白、二硝基苯酚、BCG (卡介苗)小棒狀桿菌、類鐸受體(TLR)之配體,包括但不限於肽聚糖、脂多醣及其衍生物、聚I:C、免疫刺激性寡核苷酸、咪唑喹啉諸如雷西莫特(resiquimod)及咪喹莫特(imiquimod)、鞭毛蛋白、單磷醯脂質免疫調節劑、AdjuVax 100a、QS-21、QS-18、GPI-0100、CRL1005、MF-59、OM-174、OM-197、OM-294、類病毒體佐劑技術及其任何混合物。就本發明而言,高度較佳的佐劑為含鋁佐劑,較佳為含鋁礦物凝膠,最佳為鋁膠。在一高度較佳實施例中,該佐劑為鋁膠。術語佐劑亦涵蓋上面列出的任何物質的混合物。本發明之顆粒,較佳VLP,通常已描述為佐劑。然而,如在本申請案之上下文內使用的術語「佐劑」係指並非本發明之顆粒,尤其並非用於組合物之VLP的佐劑。在各種情況下,術語佐劑係指除該顆粒外使用之佐劑。As used herein, the term "adjuvant" refers to a non-specific stimulator of an immune response or a substance that allows the creation of a reservoir in the host, which when combined with the compositions of the present invention provides even more enhanced and/or prolonged immunity. reaction, optimal interleukin production. A variety of adjuvants are known in the art and can be used in the present invention. Preferred adjuvants are selected from the group consisting of incomplete Freund's adjuvant, aluminum-containing adjuvants, modified cell wall dipeptides, surface-active substances such as lysolecithin, Pluronic polyols, polyanions, peptides , oil emulsion, keyhole hemocyanin, dinitrophenol, BCG (Bacillus Calmette-Guérin), Corynebacterium parvum, ligands of Tudor-like receptors (TLR), including but not limited to peptidoglycan, lipopolysaccharide and its derivatives, Poly I:C, immunostimulatory oligonucleotides, imidazoquinolines such as resiquimod and imiquimod, flagellin, monophospholipid immunomodulators, AdjuVax 100a, QS-21 , QS-18, GPI-0100, CRL1005, MF-59, OM-174, OM-197, OM-294, viroid adjuvant technology and any mixture thereof. For the purposes of the present invention, highly preferred adjuvants are aluminum-containing adjuvants, preferably aluminum-containing mineral gels, most preferably aluminum gels. In a highly preferred embodiment, the adjuvant is aluminum glue. The term adjuvant also encompasses mixtures of any of the substances listed above. The particles of the invention, preferably VLPs, have generally been described as adjuvants. However, the term "adjuvant" as used in the context of this application refers to an adjuvant that is not a particle of the present invention, particularly a VLP used in a composition. In each case, the term adjuvant refers to the adjuvant used in addition to the particles.

如本文所用,術語「免疫反應」係指個體之免疫系統針對分子或化合物(諸如抗原)的任何作用。在哺乳動物中,免疫反應包括細胞之活動及可溶性分子(諸如細胞介素及抗體)之產生。因此,該術語包括導致B淋巴細胞及/或T淋巴細胞活化或增殖之體液免疫反應及/或細胞免疫反應。然而,在一些情況下,免疫反應可能為低強度的,且僅在使用至少一種根據本發明之物質時才變得可偵測。「免疫原性」係指用於刺激活生物體之免疫系統的藥劑,從而使免疫系統之一或多種功能增加且針對免疫原性藥劑。As used herein, the term "immune response" refers to any action of an individual's immune system against a molecule or compound, such as an antigen. In mammals, the immune response involves cellular activity and the production of soluble molecules such as interleukins and antibodies. Thus, the term includes humoral and/or cellular immune responses that result in activation or proliferation of B lymphocytes and/or T lymphocytes. However, in some cases the immune response may be of low intensity and only become detectable upon use of at least one substance according to the invention. "Immunogenic" means an agent used to stimulate the immune system of a living organism, thereby increasing one or more functions of the immune system and targeting the immunogenic agent.

類病毒顆粒近來已成為對抗病毒感染的有前景的多功能工具。在細胞培養系統中生產的重組VLP不含病毒基因體且無法複製。就疫苗而言,VLP為活減毒病毒及全去活化病毒之有效且更安全的替代品。Virus-like particles have recently emerged as promising multifunctional tools in the fight against viral infections. Recombinant VLPs produced in cell culture systems do not contain viral genomes and cannot replicate. For vaccines, VLPs are an effective and safer alternative to live attenuated viruses and fully deactivated viruses.

因此,本發明旨在提供一種穩定表現類病毒顆粒之動物細胞。本發明不僅顯著提高製造商主細胞庫之品質且提供最高的上市速度及表現量,且亦避免由於經轉染DNA隨機插入cGMP庫主細胞株之基因體的耗時選擇過程所致的非預期缺點。在本發明之一些實施例中,較佳為具有經設計之轉殖基因之動物細胞株的穩定單株細胞,該等轉殖基因具有在預定的相同基因位點處插入基因之特徵且表現出最大化的基因表現量,以產生生產細胞株,用於製造在個體中產生抗體及預防病毒感染用之藥物。Therefore, the present invention aims to provide an animal cell that stably expresses virus-like particles. The present invention not only significantly improves the quality of the manufacturer's master cell bank and provides the highest speed to market and performance, but also avoids unintended consequences due to the time-consuming selection process of randomly inserting transfected DNA into the genome of the cGMP bank master cell line. shortcoming. In some embodiments of the present invention, stable single cells of animal cell lines with designed transgenic genes are preferred. These transgenic genes have the characteristics of inserting genes at predetermined identical gene sites and exhibit Maximize the amount of gene expression to generate production cell lines for the manufacture of drugs for producing antibodies and preventing viral infections in individuals.

本發明提供一種產生共表現多個基因之穩定細胞株的方法,其對生產疫苗候選物具有極大用途。為了實現更令人滿意的免疫反應,在本發明中利用動物細胞穩定表現VLP。為了使表現細胞株藉由定點染色體基因插入而高產且快速產生,提供哺乳動物及昆蟲細胞株以共表現多個病毒基因且有效生產VLP。在本發明之一些實施例中,VLP模擬冠狀病毒SARS-CoV-2及禽流感病毒H5N2或H3N2。The present invention provides a method for generating stable cell lines that co-express multiple genes, which is of great use for the production of vaccine candidates. In order to achieve a more satisfactory immune response, animal cells are used to stably express VLPs in the present invention. In order to enable high-yield and rapid generation of expressive cell lines through site-directed chromosomal gene insertion, mammalian and insect cell lines are provided to co-express multiple viral genes and efficiently produce VLPs. In some embodiments of the invention, the VLPs mimic the coronavirus SARS-CoV-2 and the avian influenza virus H5N2 or H3N2.

VLP包含四種主要的冠狀病毒結構蛋白,包括刺突(S)蛋白、膜(M)蛋白及包膜(E)蛋白,其被視為有前景的疫苗候選物及在SARS-CoV-2自然感染後偵測人類抗體之有用診斷劑。冠狀病毒之S、M及E蛋白在高等動物之同一細胞中同時表現可啟動VLP之自組裝及釋放。VLP contains four major coronavirus structural proteins, including spike (S) protein, membrane (M) protein and envelope (E) protein, which are regarded as promising vaccine candidates and in the nature of SARS-CoV-2. Useful diagnostic agent for detecting human antibodies following infection. The simultaneous expression of the S, M and E proteins of coronavirus in the same cells of higher animals can initiate the self-assembly and release of VLPs.

SARS-CoV-2之病毒進入係由表面糖蛋白刺突(S)介導,該刺突結合宿主細胞之血管收縮素轉化酶2 (ACE2)且經歷融合前至融合後的構形變化( Walls 等人 , Cell 176, 1026-1039 e1015, 2019)。儘管S之受體結合域(RBD)被公認為在疫苗開發中提供免疫原性,但在恢復期患者之血液中亦鑑別出靶向RBD外之S1域及SARS-CoV-2 S之S2域的其他中和抗體( Brouwer 等人 , Science 369, 643-650, 2020 Huang 等人 , PLoS Pathog 17, e1009352, 2021)。已構築具有位於S2之中心螺旋與七肽重複1之間的轉角處之2P突變的S蛋白質,以將S蛋白穩定在其融合前結構且避免COVID-19疫苗中S1次單元之脫落( Tostanoski 等人 , Nat Med 26, 1694-1700, 2020 Koff 等人 , Sci Transl Med 13, 2021 Corbett 等人 , N Engl J Med 383, 1544-1555, 2020 Polack 等人 , N Engl J Med 383, 2603-2615, 2020 Voysey 等人 , Lancet 397, 99-111, 2021)。 Viral entry of SARS-CoV-2 is mediated by the surface glycoprotein spike (S), which binds the host cell's angiotensin-converting enzyme 2 (ACE2) and undergoes a pre- to post-fusion conformational change ( Walls et al. , Cell 176, 1026-1039 e1015, 2019 ). Although the receptor-binding domain (RBD) of S is recognized as providing immunogenicity in vaccine development, the S1 domain targeting outside the RBD and the S2 domain of SARS-CoV-2 S have also been identified in the blood of convalescent patients. Other neutralizing antibodies ( Brouwer et al. , Science 369, 643-650, 2020 ; Huang et al. , PLoS Pathog 17, e1009352, 2021 ). An S protein with a 2P mutation located at the corner between the central helix of S2 and heptapeptide repeat 1 has been constructed to stabilize the S protein in its prefusion structure and avoid shedding of the S1 subunit in the COVID-19 vaccine ( Tostanoski et al. Human , Nat Med 26, 1694-1700, 2020 ; Koff et al. , Sci Transl Med 13, 2021 ; Corbett et al. , N Engl J Med 383, 1544-1555, 2020 ; Polack et al. , N Engl J Med 383, 2603 -2615, 2020 ; Voysey et al. , Lancet 397, 99-111, 2021 ).

在本發明之一些實施例中,使用定點穩定轉染系統,提供兩個呈現不可裂解2P-S及D614G-S之全長三聚體的包膜VLP,且藉由人類293F細胞株之懸浮培養生產,作為免疫原候選物。VLP 2P-S之S蛋白攜帶5個突變(3個使弗林型蛋白酶S1/S2裂解失效及2個用來穩定結構的脯胺酸),且D614G-S VLP呈現D614G變異體之原生形式S。In some embodiments of the present invention, a site-specific stable transfection system is used to provide two enveloped VLPs presenting full-length trimers of non-cleavable 2P-S and D614G-S, and are produced by suspension culture of the human 293F cell line , as immunogen candidates. The S protein of VLP 2P-S carries 5 mutations (3 that disable furin-type protease S1/S2 cleavage and 2 prolines used to stabilize the structure), and D614G-S VLP presents the native form S of the D614G variant. .

刺突蛋白之實例包括但不限於原生D614G刺突蛋白(SEQ ID NO: 6)、二脯胺酸突變刺突蛋白(2P-S) (SEQ ID NO: 8)、D614G-S突變刺突蛋白、Delta-or刺突蛋白(SEQ ID NO: 10)、Delta-GSAS 2P突變刺突蛋白(SEQ ID NO: 12)、Omicron-or刺突蛋白(SEQ ID NO: 14)、Omicron-GSAS 2P突變刺突蛋白(SEQ ID NO: 16)。在本發明之一個實施例中,原生D614G刺突蛋白之密碼子如SEQ ID NO: 7中所示最佳化;二脯胺酸突變刺突蛋白(2P-S)之密碼子如SEQ ID NO: 9中所示最佳化;Delta-or刺突蛋白之密碼子如SEQ ID NO: 11中所示最佳化;Delta-GSAS 2P刺突蛋白之密碼子如SEQ ID NO: 13中所示最佳化;Omicron-or刺突蛋白之密碼子如SEQ ID NO: 15中所示最佳化;Omicron-GSAS 2P刺突蛋白之密碼子如SEQ ID NO: 17中所示最佳化。Examples of spike proteins include, but are not limited to, native D614G spike protein (SEQ ID NO: 6), diproline mutant spike protein (2P-S) (SEQ ID NO: 8), D614G-S mutant spike protein , Delta-or spike protein (SEQ ID NO: 10), Delta-GSAS 2P mutant spike protein (SEQ ID NO: 12), Omicron-or spike protein (SEQ ID NO: 14), Omicron-GSAS 2P mutation Spike protein (SEQ ID NO: 16). In one embodiment of the invention, the codons of the native D614G spike protein are optimized as shown in SEQ ID NO: 7; the codons of the diproline mutant spike protein (2P-S) are as shown in SEQ ID NO : Optimized as shown in 9; the codons of Delta-or spike protein are optimized as shown in SEQ ID NO: 11; the codons of Delta-GSAS 2P spike protein are shown in SEQ ID NO: 13 Optimized; the codons of Omicron-or spike protein are optimized as shown in SEQ ID NO: 15; the codons of Omicron-GSAS 2P spike protein are optimized as shown in SEQ ID NO: 17.

在本發明之一些實施例中,VLP包含流感病毒之血球凝集素(HA)、神經胺糖酸酶(NA)及基質蛋白(M1及M2)。在同一動物細胞中共表現結構蛋白會引起VLP之自組裝及釋放,表現出整個病毒體之原生結構且已證實可用於引發中和抗體,因此代表一種有前景的疫苗候選物及開發診斷試劑之重組抗原。In some embodiments of the invention, the VLPs comprise hemagglutinin (HA), neuraminidase (NA) and matrix proteins (M1 and M2) of influenza virus. Co-expression of structural proteins in the same animal cell results in the self-assembly and release of VLPs, exhibits the native structure of the entire virion and has been shown to be useful in eliciting neutralizing antibodies, thus representing a promising vaccine candidate and recombination for the development of diagnostic reagents antigen.

在本發明之一些實施例中,流感病毒為H5N2,諸如A/duck/Taiwan/01006/2015/H5N2。如本文所揭示之流感病毒結構蛋白包含血球凝集素(HA)、神經胺糖酸酶(NA)及基質蛋白(M1及M2)。在本發明之一些實施例中,H5蛋白如SEQ ID NO: 18中所示,且H5蛋白之密碼子如SEQ ID NO: 19中所示最佳化。在本發明之一些實施例中,N2蛋白如SEQ ID NO: 20中所示,且N2蛋白之密碼子如SEQ ID NO: 21中所示最佳化。In some embodiments of the invention, the influenza virus is H5N2, such as A/duck/Taiwan/01006/2015/H5N2. Influenza virus structural proteins as disclosed herein include hemagglutinin (HA), neuraminidase (NA) and matrix proteins (M1 and M2). In some embodiments of the invention, the H5 protein is as shown in SEQ ID NO: 18, and the codons of the H5 protein are optimized as shown in SEQ ID NO: 19. In some embodiments of the invention, the N2 protein is as shown in SEQ ID NO: 20, and the codons of the N2 protein are optimized as shown in SEQ ID NO: 21.

在本發明之一個實施例中,流感病毒為H5N2,諸如A/Taiwan/083/2006/H3N2。在本發明之一些實施例中,M1蛋白如SEQ ID NO: 22中所示,且M1蛋白之密碼子如SEQ ID NO: 23中所示最佳化。在本發明之一些實施例中,M2蛋白如SEQ ID NO: 24中所示,且M1蛋白之密碼子如SEQ ID NO: 25中所示最佳化。In one embodiment of the invention, the influenza virus is H5N2, such as A/Taiwan/083/2006/H3N2. In some embodiments of the invention, the M1 protein is as shown in SEQ ID NO: 22, and the codons of the M1 protein are optimized as shown in SEQ ID NO: 23. In some embodiments of the invention, the M2 protein is as shown in SEQ ID NO: 24, and the codons of the M1 protein are optimized as shown in SEQ ID NO: 25.

在本發明之一些實施例中,動物細胞係藉由「快速多基因過度表現系統」製造,該系統包含(1)捕獲允許GFP基因在宿主細胞株染色體中之最高表現能力位點及誘導型表現的染色體基因位點,以獲得創始細胞株,(2)工程改造供體質體,該質體攜帶由CMV/TO啟動子單獨驅動之多個轉殖基因簇,及(3)經由FLPe重組酶介導之卡匣交換(RMCE)「交換捕獲之GFP基因」與供體基因簇,以實現所有轉殖基因之定點插入。In some embodiments of the present invention, animal cell lines are produced by a "rapid multigene overexpression system" that includes (1) capturing the highest expression capacity site and inducible expression of the GFP gene in the chromosome of the host cell line chromosomal gene loci to obtain founder cell lines, (2) engineering donor plastids that carry multiple transgene clusters driven individually by the CMV/TO promoter, and (3) mediated by FLPe recombinase Guided cassette exchange (RMCE) "exchanges the captured GFP gene" with the donor gene cluster to achieve targeted insertion of all transgenic genes.

特別地,如本文所述之動物細胞係藉由以下製造:(1)捕獲允許哺乳動物及昆蟲細胞株中最高位準之誘導型外源基因表現的染色體基因位點,(2)工程改造攜帶FRT側接之數個轉殖基因卡匣簇、CMV/TO啟動子驅動且表現3或4種病毒結構蛋白之供體質體,(3)經由與FLPe重組酶共轉染「基因交換」供體卡匣,以實現所有轉殖基因之定點插入,及(4)生產及純化VLP。Specifically, animal cell lines as described herein are produced by (1) capturing chromosomal loci that allow the highest levels of inducible foreign gene expression in mammalian and insect cell lines, and (2) engineering to carry FRT is flanked by several transgene cassette clusters, CMV/TO promoter-driven donor plastids expressing 3 or 4 viral structural proteins, (3) "gene exchange" donors are co-transfected with FLPe recombinase cassette to achieve site-specific insertion of all transgenic genes, and (4) production and purification of VLPs.

在本發明之一個實施例中,誘導型表現卡匣包含作為目標卡匣之四環素誘導型啟動子,諸如Flp/FRT重組系統之CMV/TO卡匣,上下游毗鄰F-及F3序列。在本發明之一些實施例中,動物細胞亦穩定表現四環素抑制子卡匣。在本發明之一些實施例中,穩定表現之四環素抑制子卡匣包含四環素抑制子基因及源自豬鐵士古病毒1之自裂解2A肽連接之保米黴素S抗性基因。在本發明之一些實施例中,穩定表現卡匣為EF1a/eIF4g-pCI-TetR-P2A-BSR卡匣。In one embodiment of the invention, the inducible expression cassette includes as a target cassette a tetracycline-inducible promoter, such as the CMV/TO cassette of the Flp/FRT recombination system, adjacent upstream and downstream of F- and F3 sequences. In some embodiments of the invention, animal cells also stably express the tetracycline inhibitor cassette. In some embodiments of the invention, a stably expressing tetracycline suppressor cassette comprises a tetracycline suppressor gene and a self-cleaving 2A peptide-linked pumimycin S resistance gene derived from porcine Tiescavirus 1. In some embodiments of the invention, the stable performance cassette is an EF1a/eIF4g-pCI-TetR-P2A-BSR cassette.

在本發明之一個實施例中,用於哺乳動物細胞系統之目標卡匣展示於圖13中,且質體pGEMT-RMCE1-CMVto-sfGFP之圖譜展示於圖15中。In one embodiment of the invention, a targeting cassette for a mammalian cell system is shown in Figure 13, and a map of plastid pGEMT-RMCE1-CMVto-sfGFP is shown in Figure 15.

在本發明之一個實施例中,誘導型表現卡匣包含多西環素誘導型啟動子。多西環素誘導型啟動子之實例包括但不限於黃杉毒蛾核多角體病毒(OpMNPV)立即早期基因2 (IE2)及姬透目天蠶蛾 肌動蛋白 A1基因之啟動子。原則上,連結組成表現Tet抑制子並於TATA匣下游插入2次重複串聯之 tet操縱子 (TetO2),藉由讓Tet抑制子結合來管制IE2及姬透目天蠶蛾 肌動蛋白 A1啟動子之表現,直至多西環素處理釋放Tet抑制子而開啟基因表現。誘導型表現卡匣進一步包含CMV/TO驅動之VLP基因,分佈於2或3個串聯基因中。整個轉殖基因簇上下游毗鄰兩個 FRT位點(F及Fn)以成為FLPe重組酶之目標卡匣。將供體質體及FLPe表現質體共轉染至創始細胞株中。藉由VLP基因中報導子缺失及HA獲得表現再次分選細胞。 In one embodiment of the invention, the inducible expression cassette comprises a doxycycline-inducible promoter. Examples of doxycycline-inducible promoters include, but are not limited to, the promoters of the OpMNPV immediate early gene 2 (IE2) and the Cecropia gigas actin A1 gene. In principle, the tet operator (TetO2), which expresses the Tet repressor and is inserted in tandem with 2 repeats downstream of the TATA box, is linked to control the interaction between IE2 and the Cecropia actin A1 promoter by allowing the Tet repressor to bind. expression until doxycycline treatment releases the Tet repressor and turns on gene expression. The inducible expression cassette further contains CMV/TO driven VLP genes distributed in 2 or 3 tandem genes. The entire transgenic gene cluster is adjacent to two FRT sites (F and Fn) upstream and downstream to become the target cassette of FLPe recombinase. The donor plasmid and FLPe expression plasmid were co-transfected into the founder cell line. Cells were sorted again based on reporter deletion and HA gain expression in the VLP gene.

在本發明之一個實施例中,昆蟲細胞系統之目標卡匣展示於圖14中,且質體pUC57.Insect RMCR1之圖譜展示於圖16中。In one embodiment of the present invention, the targeting cassette of the insect cell system is shown in Figure 14, and the map of plastid pUC57.Insect RMCR1 is shown in Figure 16.

本發明亦提供一種用於製造類病毒顆粒之方法,其包含培養動物細胞及收穫類病毒顆粒。The invention also provides a method for producing virus-like particles, which includes culturing animal cells and harvesting virus-like particles.

在本發明之一些實施例中,該方法包含培養動物細胞,移除細胞碎片及其他大的聚集物,及藉由兩步蔗糖梯度(30%且隨後40%-60%)超速離心或使用Crapto Q及Capto Core 700多模態(MMC)及透濾之2步管柱層析,或使用Capto DeVirS及Capto Core 700之2步管柱層析純化VLP。In some embodiments of the invention, the method includes culturing animal cells, removing cell debris and other large aggregates, and ultracentrifuging through a two-step sucrose gradient (30% and then 40%-60%) or using Crapto Q and Capto Core 700 multi-modal (MMC) and diafiltration 2-step column chromatography, or use Capto DeVirS and Capto Core 700 2-step column chromatography to purify VLPs.

本發明亦提供一種類病毒顆粒,其藉由包含培養如本文所述之動物細胞及收穫類病毒顆粒之方法製造。The invention also provides a virus-like particle produced by a method comprising culturing animal cells as described herein and harvesting the virus-like particle.

本發明提供一種疫苗組合物,其包含免疫有效量之類病毒顆粒,該類病毒顆粒藉由包含培養如本文所述之動物細胞及收穫類病毒顆粒之方法製造。The present invention provides a vaccine composition comprising an immunologically effective amount of virus-like particles produced by a method comprising culturing animal cells as described herein and harvesting virus-like particles.

在另一實施例中,疫苗組合物進一步包含至少一種佐劑,諸如明礬或不完全弗氏佐劑。In another embodiment, the vaccine composition further comprises at least one adjuvant, such as alum or incomplete Freund's adjuvant.

本發明提供一種用於預防個體之病毒感染的方法,其包含向該個體投予疫苗組合物。本發明亦提供如本文所述之疫苗組合物的用途,其用於製造供預防個體之病毒感染用的藥物。The present invention provides a method for preventing viral infection in an individual, comprising administering a vaccine composition to the individual. The invention also provides the use of a vaccine composition as described herein for the manufacture of a medicament for preventing viral infection in an individual.

在本發明之一些實施例中,病毒感染為冠狀病毒感染或流感病毒感染。特別地,病毒感染為SARS-CoV-2感染或H5N2或H3N2流感病毒感染。In some embodiments of the invention, the viral infection is a coronavirus infection or an influenza virus infection. In particular, the viral infection is a SARS-CoV-2 infection or an H5N2 or H3N2 influenza virus infection.

在本發明之一些實施例中,VLP之投予係為了預防病毒複製或緩解由病毒感染引起的症狀。由於SARS-CoV-2感染引起之症狀的一個實例包括但不限於肺炎。In some embodiments of the invention, VLPs are administered to prevent viral replication or alleviate symptoms caused by viral infection. An example of symptoms due to SARS-CoV-2 infection includes, but is not limited to, pneumonia.

本發明亦提供一種用於產生抗體之方法,其包含向個體投予疫苗組合物且收穫對VLP具有特異性的抗體。本發明亦提供如本文所述之疫苗組合物的用途,其用於製造供個體產生對VLP具有特異性之抗體用的藥物。The invention also provides a method for generating antibodies comprising administering a vaccine composition to an individual and harvesting antibodies specific for VLPs. The invention also provides the use of a vaccine composition as described herein for the manufacture of a medicament for an individual to produce antibodies specific for VLPs.

特別地,抗體為中和抗體。另外,中和抗體可應用於治療病毒感染及由於病毒感染引起之症狀。In particular, the antibodies are neutralizing antibodies. In addition, neutralizing antibodies can be used to treat viral infections and symptoms caused by viral infections.

提供以下實例以幫助熟習此項技術者實踐本發明。 實例 材料及方法: The following examples are provided to assist those skilled in the art in practicing the invention. Example materials and methods:

誘導型表現卡匣Induced Performance Cassette

為了構築誘導型表現卡匣,吾等調整四環素誘導型啟動子(CMV/TO),該啟動子自pcDNA4/TO (Invitrogen)獲得,與自pCI (Promega, Madison, WI)獲得之通用嵌合內含子、重組開放閱讀框架及來自牛生長激素基因之聚腺苷醯化信號(BGH polyA)或SV40 polyA連接。為了在四環素或多西環素誘導前停止CMV/TO啟動子,吾等引入Tet抑制子(TetR,來自pcDNA6/TR且針對哺乳動物密碼子使用進行最佳化)之組成型表現。為了確保TetR在經穩定轉染之細胞中表現,TetR經設計以與保米黴素S抗性基因(bsr,製革疏螺旋體( Borrelia coriaceae)胞苷去胺酶)共同抑制,該基因由來源於豬鐵士古病毒1之自裂解2A肽(P2A)連接用於負向選擇。使用CMV/TO-GFP作為與EF1a/IF4g-pCI-TR-P2A-BSR基因(pUC57.Insect RMCR1或pGEMT-RMCE1-CMVto-sfGFP)結合之報導子,吾等已藉由隨機插入宿主細胞基因體產生創始單株細胞,且選擇表現出最大化Tet誘導型GFP表現之單株細胞。在吾等對不同宿主細胞株中之綠色螢光進行最佳化期間,superfolder GFP用於哺乳動物細胞株,而turbo GFP用於昆蟲細胞株。所用GFP及BSR均針對哺乳動物密碼子使用進行最佳化。 To construct the inducible expression cassette, we adapted the tetracycline-inducible promoter (CMV/TO) obtained from pcDNA4/TO (Invitrogen) into a universal chimeric gene obtained from pCI (Promega, Madison, WI). Intron, recombinant open reading frame and polyadenylation signal (BGH polyA) or SV40 polyA from the bovine growth hormone gene are linked. To stop the CMV/TO promoter prior to tetracycline or doxycycline induction, we introduced constitutive expression of the Tet repressor (TetR, derived from pcDNA6/TR and optimized for mammalian codon usage). To ensure that TetR is expressed in stably transfected cells, TetR was designed to co-repress the bomimycin S resistance gene (bsr, Borrelia coriaceae cytidine deaminase), which is derived from Self-cleaving 2A peptide (P2A) ligation of porcine Tiscavirus 1 was used for negative selection. Using CMV/TO-GFP as a reporter that binds to the EF1a/IF4g-pCI-TR-P2A-BSR gene (pUC57.Insect RMCR1 or pGEMT-RMCE1-CMVto-sfGFP), we have randomly inserted into the host cell genome Founder cells are generated and those showing maximal expression of Tet-inducible GFP are selected. During our optimization of green fluorescence in different host cell lines, superfolder GFP was used for mammalian cell lines and turbo GFP was used for insect cell lines. Both GFP and BSR used were optimized for mammalian codon usage.

Tet抑制子之序列顯示於SEQ ID NO: 26中,最佳化密碼子為SEQ ID NO: 30;BSR之序列顯示於SEQ ID NO: 27之,最佳化密碼子為SEQ ID NO: 31;sfGFP之序列顯示於SEQ ID NO: 28中,最佳化密碼子為SEQ ID NO: 32;P2A之序列顯示於SEQ ID NO: 29中,最佳化密碼子為SEQ ID NO: 35;hEF1α/eIF4γ啟動子之序列顯示於SEQ ID NO: 33中;CVM/TO之序列顯示於SEQ ID NO: 34中;SV40之聚腺苷酸化信號序列顯示於SEQ ID NO: 36中;牛生長激素(BGH)之聚腺苷酸化信號序列顯示於SEQ ID NO: 37中;The sequence of Tet suppressor is shown in SEQ ID NO: 26, and the optimized codon is SEQ ID NO: 30; the sequence of BSR is shown in SEQ ID NO: 27, and the optimized codon is SEQ ID NO: 31; The sequence of sfGFP is shown in SEQ ID NO: 28, and the optimized codon is SEQ ID NO: 32; the sequence of P2A is shown in SEQ ID NO: 29, and the optimized codon is SEQ ID NO: 35; hEF1α/ The sequence of the eIF4γ promoter is shown in SEQ ID NO: 33; the sequence of CVM/TO is shown in SEQ ID NO: 34; the polyadenylation signal sequence of SV40 is shown in SEQ ID NO: 36; bovine growth hormone (BGH) ) is shown in SEQ ID NO: 37;

A/California/07/2009/H1N1之M1蛋白的序列顯示於SEQ ID NO: 40中;turboGFP之序列顯示於SEQ ID NO: 41中;組成型姬透目天蠶蛾啟動子之序列顯示於SEQ ID NO: 42中;誘導型姬透目天蠶蛾啟動子之序列顯示於SEQ ID NO: 43中;誘導型IE2之序列顯示於SEQ ID NO: 44中;OpMNPV之聚腺苷酸化信號序列顯示於SEQ ID NO: 45中。The sequence of the M1 protein of A/California/07/2009/H1N1 is shown in SEQ ID NO: 40; the sequence of turboGFP is shown in SEQ ID NO: 41; the sequence of the constitutive Cecropia moth promoter is shown in SEQ ID NO: 42; the sequence of the inducible Cecropia promoter is shown in SEQ ID NO: 43; the sequence of inducible IE2 is shown in SEQ ID NO: 44; the polyadenylation signal sequence of OpMNPV is shown in SEQ ID NO: 45.

四環素抑制子卡匣tetracycline inhibitor cassette

組成型表現卡匣不用於病毒基因中。實際上,其用於表現tet抑制子以停止CMV/TO啟動子,直至四環素或多西環素之誘導。Constitutive expression cassettes are not used in viral genes. Indeed, it is used to express the tet repressor to stop the CMV/TO promoter until induction by tetracycline or doxycycline.

表現細胞之建立Establishment of expressive cells

VLP表現細胞係在FreeStyle 293F細胞中建立。293F創始細胞係藉由穩定轉染CMV/TO-GFP之誘導型表現作為Flp/ FRT重組系統之目標卡匣,側接F-及F 3位點,及EF1a/eIF4g-TetR-P2A-BSD之組成型表現來建立。經雙重轉染之細胞藉由保米黴素S進行負向選擇,且藉由GFP強度進行單株細胞分離。對於S/M/E基因之定點重組,創始細胞用攜帶側接F-及F 3位點之CMV/TO-S-CMV-TO-M-IRES-E表現卡匣之供體質體及表現FLPe重組酶之質體共轉染,且隨後分離缺失GFP且獲得S/M/E基因之單株細胞。 VLP expressing cell lines were established in FreeStyle 293F cells. The 293F founder cell line serves as the target cassette of the Flp/ FRT recombination system through stable transfection of CMV/TO-GFP, flanked by F- and F3 sites, and EF1a/eIF4g-TetR-P2A-BSD. Constitutive performance is established. Double-transfected cells were negatively selected by puminomycin S, and single cells were separated by GFP intensity. For site-directed recombination of S/M/E genes, founder cells were expressed using donor plastids carrying the CMV/TO-S-CMV-TO-M-IRES-E expression cassette flanked by F- and F3 sites and expressing FLPe The plasmids of the recombinase were co-transfected, and individual cells lacking GFP and obtaining the S/M/E gene were subsequently isolated.

免疫螢光染色Immunofluorescence staining

VLP表現細胞用Dox或媒劑對照誘導48小時。細胞隨後在4%多聚甲醛中固定10分鐘且在0.05% Triton X-100中浸漬1分鐘。細胞隨後用3% BSA阻斷,與特異性初級抗體一起培育,洗滌,接著與結合Cy2或Cy3染料之山羊抗兔或山羊抗小鼠IgG一起培育。螢光影像由倒置螢光顯微鏡(Observer D1, Zeiss)擷取。此研究中使用之抗體為S1 (40150-R007, Sino Biological)及S2 (GTX632604, Genetex)。VLP expressing cells were induced with Dox or vehicle control for 48 hours. Cells were then fixed in 4% paraformaldehyde for 10 min and soaked in 0.05% Triton X-100 for 1 min. Cells were then blocked with 3% BSA, incubated with specific primary antibodies, washed, and then incubated with goat anti-rabbit or goat anti-mouse IgG conjugated to Cy2 or Cy3 dyes. Fluorescence images were captured with an inverted fluorescence microscope (Observer D1, Zeiss). The antibodies used in this study were S1 (40150-R007, Sino Biological) and S2 (GTX632604, Genetex).

細胞懸浮培養及cell suspension culture and VLPVLP 生產produce

將293F VLP生產細胞(約2 × 10 6/mL)接種於2 L錐形瓶中之FreeStyle 293表現培養基(Gibco)中,且在37℃下具有5% CO 2之含濕氣培育箱中藉由以150 rpm攪拌進行懸浮培養。為了誘導細胞表現及分泌VLP,在培養基中添加1 µg/ml多西環素72小時,收穫其條件培養基,用0.45 µm Stericap過濾,藉由Vivaflow 50 (Sartorius Stedim Biotech)濃縮,且使用安裝在ÄKTA pure 25系統(Cytiva, GE Healthcare, Swenson)上之Capto Q及Capto Core 700管柱(GE Healthcare, Swenson)在4℃下進行層析純化。 293F VLP production cells (approximately 2 × 10 6 /mL) were inoculated in FreeStyle 293 Expression Medium (Gibco) in 2 L Erlenmeyer flasks and incubated in a humidified incubator with 5 % CO at 37°C. Suspension culture was performed by stirring at 150 rpm. To induce cell expression and secretion of VLPs, 1 µg/ml doxycycline was added to the culture medium for 72 hours, and the conditioned medium was harvested, filtered through 0.45 µm Stericap, concentrated by Vivaflow 50 (Sartorius Stedim Biotech), and used on an ÄKTA Chromatographic purification was performed on Capto Q and Capto Core 700 columns (GE Healthcare, Swenson) on the pure 25 system (Cytiva, GE Healthcare, Swenson) at 4°C.

蛋白質分析及西方墨點法Protein analysis and Western blotting

經純化之VLP的蛋白質成分藉由Quant-iT蛋白質分析套組(Invitrogen)進行定量。經純化之VLP與Lämmle SDS-PAGE樣品緩衝液混合,無還原劑且煮沸(N)、無還原劑但煮沸2分鐘(NB)、有還原劑且煮沸(RB),接著在4-12%梯度凝膠中進行SDS-PAGE且隨後進行西方墨點分析。The protein components of purified VLPs were quantified by Quant-iT protein analysis kit (Invitrogen). Purified VLPs were mixed with Lämmle SDS-PAGE sample buffer without reducing agent and boiled (N), without reducing agent and boiled for 2 minutes (NB), with reducing agent and boiled (RB), followed by a 4-12% gradient. SDS-PAGE was performed on the gel followed by Western blot analysis.

粒徑之動態光散射Particle size dynamic light scattering (DLS)(DLS) 測定Determination

VLP樣品在20 mM磷酸鹽緩衝液pH 7.4中稀釋至0.1 µg/mL,通過0.45 µm過濾器,且在Nano ZS粒徑分析儀(Malvern Zetasizer, Malvern Instruments)上進行分析。各樣品藉由DLS量測60秒,連續兩次。使用隨附軟體(Nanov510)自基於強度之量測轉換為整合各尺寸等級之顆粒數目的尺寸分佈,且以曲線圖的形式表示,顯示樣品之頻率分佈,其中曲線下面積與指定尺寸範圍內偵測到的顆粒數目成比例。隨後將VLP之平均直徑計算為三個獨立實驗之顆粒群之平均尺寸±標準偏差(SD)。VLP samples were diluted to 0.1 µg/mL in 20 mM phosphate buffer pH 7.4, passed through a 0.45 µm filter, and analyzed on a Nano ZS particle size analyzer (Malvern Zetasizer, Malvern Instruments). Each sample was measured by DLS for 60 seconds, twice consecutively. Use the accompanying software (Nanov510) to convert intensity-based measurements into a size distribution that integrates the number of particles in each size class and present it in the form of a curve graph showing the frequency distribution of the sample, where the area under the curve is related to the detection within the specified size range. Proportional to the number of particles measured. The mean diameter of the VLPs was then calculated as the mean size ± standard deviation (SD) of the particle population from three independent experiments.

冷凍電子顯微鏡cryo-electron microscopy

為了製備冷凍電子顯微鏡網格,將經純化之VLP的等分試樣(約4 μL)添加至輝光放電Quantifoil R2/2多孔碳網格(Quatifoil GmbH, Germany)中。網格兩面用濾紙吸乾3秒,且隨後使用Thermo Scientific Vitrobot系統(Mark IV)將其驟然冷凍至由液氮冷卻的液體乙烷中。冷凍電子顯微鏡網格在成像前一直儲存在液氮中,所有後續步驟均在-160℃以下進行,以防止失透。To prepare cryo-EM grids, aliquots (approximately 4 μL) of purified VLPs were added to glow discharge Quantifoil R2/2 porous carbon grids (Quatifoil GmbH, Germany). The grids were blotted dry with filter paper on both sides for 3 seconds and subsequently snap-frozen into liquid ethane cooled by liquid nitrogen using a Thermo Scientific Vitrobot system (Mark IV). Cryo-EM grids were stored in liquid nitrogen until imaging, and all subsequent steps were performed below -160°C to prevent devitrification.

冷凍電子顯微鏡網格經剪切,安裝於卡匣中,用奈米帽轉移且裝載至200 kV Talos Arctica透射電子顯微鏡(Thermo Fisher Scientific)中。對準係以奈米探針模式(光斑尺寸3,槍透鏡4,C2透鏡設置為43.8%)進行,以實現平行光束對準及無慧形像差對準。用以線性模式操作之Falcon III偵測器(Thermo Fisher Scientific)以92,000×之放大率記錄冷凍電子顯微鏡影像,像素大小為1.1 Å/像素。用於成像之散焦設置為約2.5 μm,劑量率設置為約每秒20 e-/Å2,以在2.5秒內產生約50 e-/Å2之總劑量。使用EPU-2.2.0軟體(Thermo Fisher Scientific)收集冷凍電子顯微鏡影像。Cryo-EM grids were cut, mounted in cassettes, transferred with nanocaps and loaded into a 200 kV Talos Arctica transmission electron microscope (Thermo Fisher Scientific). The alignment was performed in nanoprobe mode (spot size 3, gun lens 4, C2 lens set to 43.8%) to achieve parallel beam alignment and coma-free alignment. Cryo-EM images were recorded at 92,000× magnification with a Falcon III detector (Thermo Fisher Scientific) operating in linear mode with a pixel size of 1.1 Å/pixel. The defocus setting for imaging was approximately 2.5 μm and the dose rate was set to approximately 20 e-/Å2 per second to produce a total dose of approximately 50 e-/Å2 in 2.5 seconds. Cryo-electron microscopy images were collected using EPU-2.2.0 software (Thermo Fisher Scientific).

將冷凍電子顯微鏡網格裝載至200 kV Talos Arctica透射電子顯微鏡(Thermo Fisher Scientific)中。使用Falcon III偵測器(Thermo Fisher Scientific)以73,000×之放大率記錄傾斜影像,像素大小為1.4 Å/像素。用於成像之散焦設置為約6 μm。使用Tomography-4.10.0軟體(Thermo Fisher Scientific)收集傾斜範圍為±60°且恆定角度增量為3°(自+20°至-60°,且隨後自+20°至+60°)之斷層掃描傾斜影像。各傾斜使用約3 e-/Å2之劑量,使得41個傾斜影像之總劑量為約120 e-/Å2。藉由Inspect3D-4.2軟體(Thermo Fisher Scientific)自傾斜影像重建3D斷層成像圖。對準傾斜影像,調整傾斜軸線,且用同時迭代重建技術(SIRT)進行斷層成像重建。用Inspect3D-4.2軟體(Thermo Fisher Scientific)中之「Inspect Stack」功能對斷層成像重建進行可視化。Cryo-EM grids were loaded into a 200 kV Talos Arctica transmission electron microscope (Thermo Fisher Scientific). Oblique images were recorded using a Falcon III detector (Thermo Fisher Scientific) at a magnification of 73,000× with a pixel size of 1.4 Å/pixel. The defocus setting used for imaging was approximately 6 μm. Tomography-4.10.0 software (Thermo Fisher Scientific) was used to collect slices with a tilt range of ±60° and constant angle increments of 3° (from +20° to -60°, and subsequently from +20° to +60°). Scan oblique images. Each tilt uses a dose of approximately 3 e-/Å2, resulting in a total dose of 41 tilt images of approximately 120 e-/Å2. 3D tomographic images were reconstructed from oblique images using Inspect3D-4.2 software (Thermo Fisher Scientific). Align the oblique image, adjust the oblique axis, and perform tomographic reconstruction using Simultaneous Iterative Reconstruction Technology (SIRT). The tomographic reconstruction was visualized using the “Inspect Stack” function in Inspect3D-4.2 software (Thermo Fisher Scientific).

免疫策略Immunization strategy

八週齡雌性C57BL/6小鼠及雄性金色敍利亞倉鼠係購自臺灣中央研究院國立實驗室動物中心(National Laboratory Animal Center, Academia Sinica, Taiwan)。VLP配方用或不用Alhydrogel或AddaVax佐劑(InvivoGen)以1:1混合物形式進行佐劑化。藉由皮下注射對9週齡的小鼠及倉鼠進行兩次免疫,且初打-加打間隔時間為10天( Liang 等人 , Sci Transl Med 9, 2017)。小鼠之注射體積為100 μL且倉鼠之注射體積為200 μL。在追加注射前及追加注射後每週收集血液樣品。 Eight-week-old female C57BL/6 mice and male golden Syrian hamster lines were purchased from the National Laboratory Animal Center, Academia Sinica, Taiwan. VLP formulations were adjuvanted with or without Alhydrogel or AddaVax adjuvant (InvivoGen) as a 1:1 mixture. Nine-week-old mice and hamsters were immunized twice by subcutaneous injection, and the interval between the initial injection and the additional injection was 10 days ( Liang et al ., Sci Transl Med 9, 2017 ). The injection volume for mice was 100 μL and for hamsters was 200 μL. Blood samples were collected before the booster injection and weekly after the booster injection.

ELISAELISA 特異性之測定Determination of specificity

ELISA盤(Nunc)在4℃下用D614G-S VLP塗佈隔夜且用StartingBlock阻斷緩衝液(Thermo Fisher Scientific)阻斷。將指定稀釋度之倉鼠血清樣品添加至經塗佈之ELISA盤中,且隨後在37℃下培育1小時,用HRP結合之二級Ab追蹤且用TMB受質(Pierce)顯影,最後在450 nm下量測吸光度(Power Wave XS, Bio-Tek)。在各ELISA步驟之間用PBST緩衝液洗滌三次。倉鼠血清中之IgG亞型用各別的二級抗體,亦即抗倉鼠IgG1 (1940-05, SouthernBiotech)及抗倉鼠IgG2及IgG3 (1935-05, SouthernBiotech)偵測。ELISA plates (Nunc) were coated with D614G-S VLP overnight at 4°C and blocked with StartingBlock blocking buffer (Thermo Fisher Scientific). Hamster serum samples at indicated dilutions were added to coated ELISA plates and subsequently incubated at 37°C for 1 hour, chased with HRP-conjugated secondary Ab and developed with TMB substrate (Pierce), and finally at 450 nm. Measure the absorbance (Power Wave XS, Bio-Tek). Wash three times with PBST buffer between each ELISA step. The IgG subtypes in hamster serum were detected using separate secondary antibodies, namely anti-hamster IgG1 (1940-05, SouthernBiotech) and anti-hamster IgG2 and IgG3 (1935-05, SouthernBiotech).

ELISpotELISpot 分析analyze

使用ELISpot分析套組(R&D Systems)測定小鼠值IFN-γ或IL-4。在追加劑後第二週藉由二氧化碳對免疫小鼠實施安樂死。收穫脾細胞且以5 × 10 5/孔接種於96孔盤中,用抗IFN-γ或抗IL-4 Ab預塗佈24小時。在用緩衝液洗三次且與偵測抗體一起在2-8℃下培育隔夜後,將盤用緩衝液洗滌三次且與卵白素-AP一起在室溫下培育1小時。隨後將其再洗滌三次,且隨後藉由與BCIP/NBT色素原一起在室溫下培育1小時來顯色,且將盤用去離子水沖洗。 Mouse IFN-γ or IL-4 values were determined using an ELISpot assay kit (R&D Systems). The immunized mice were euthanized by carbon dioxide the second week after the booster dose. Splenocytes were harvested and seeded at 5 × 10 5 /well in 96-well plates, precoated with anti-IFN-γ or anti-IL-4 Ab for 24 hours. After washing three times with buffer and incubating with detection antibody overnight at 2-8°C, the plate was washed three times with buffer and incubated with avidin-AP for 1 hour at room temperature. It was then washed three more times and color was then developed by incubation with BCIP/NBT chromogen for 1 hour at room temperature and the plates were rinsed with deionized water.

假病毒中和分析Pseudovirus neutralization analysis

293T/17-ACE2細胞及假病毒由國立RNAi核心設施(臺灣中央研究院)提供。293T/17-ACE2細胞接種於具有1%加熱去活化FBS DMEM培養基之96孔盤中。免疫血清自1:20稀釋2倍。等體積之假病毒與經稀釋之免疫血清一起在37℃下培育1小時。假病毒攜帶SARS-CoV-2之S蛋白及作為報導子之螢光素酶基因。培育後,將血清-假病毒混合物添加至細胞中且以1,100 ×g離心30分鐘,且將細胞在37℃下具有5% CO 2之含濕氣培育箱中培養24小時。用1% FBS DMEM培養基更新培養基且再培育48小時。用螢火蟲螢光素酶分析套組(Biotium)量測螢光素酶活性。 293T/17-ACE2 cells and pseudovirus were provided by the National RNAi Core Facility (Academia Sinica, Taiwan). 293T/17-ACE2 cells were seeded in 96-well plates with 1% heat-inactivated FBS DMEM medium. Immune serum was diluted 2 times from 1:20. An equal volume of pseudovirus was incubated with diluted immune serum at 37°C for 1 hour. The pseudovirus carries the S protein of SARS-CoV-2 and the luciferase gene as a reporter. After incubation, the serum-pseudovirus mixture was added to the cells and centrifuged at 1,100 × g for 30 minutes, and the cells were cultured at 37°C in a humidified incubator with 5% CO for 24 hours. The medium was refreshed with 1% FBS DMEM medium and incubated for an additional 48 hours. The luciferase activity was measured using a firefly luciferase assay kit (Biotium).

CPECPE 中和分析Neutralization analysis

將連續稀釋的抗體與100 TCID 50SARS-CoV-2 TCDC#4 (hCoV-19/Taiwan/4/2020)一起在37℃下培育1小時。隨後將混合物添加至預先接種之Vero E6細胞中且培養4天。細胞用10%甲醛固定且用0.5%結晶紫染色20分鐘。用自來水洗滌盤且對感染進行評分。藉由李-明二氏法(Reed and Muench method)計算50%保護力價。 Serially diluted antibodies were incubated with 100 TCID 50 SARS-CoV-2 TCDC#4 (hCoV-19/Taiwan/4/2020) for 1 hour at 37°C. The mixture was then added to preseeded Vero E6 cells and cultured for 4 days. Cells were fixed with 10% formaldehyde and stained with 0.5% crystal violet for 20 minutes. Dishes were washed with tap water and infections were scored. The 50% protective power price was calculated using the Reed and Muench method.

病毒攻擊實驗Virus attack experiment

倉鼠模型之病毒攻擊感染實驗經機構動物護理及使用委員會(IACUC)及中央研究院之P-3實驗室批准。將經疫苗接種之敍利亞倉鼠麻醉且用1×10 5PFU之SARS-CoV-2 TCDC#4 (hCoV-19/Taiwan/4/2020, GISAID寄存編號:EPI_ISL_411927) (批號:IBMS20200819,8.0 × 10 5PFU/mL,體積為125 μL)進行鼻內攻擊。所有倉鼠在SARS-CoV-2攻擊感染後每日稱重。感染實驗中存活的倉鼠使用二氧化碳進行安樂死。 The viral challenge infection experiment in the hamster model was approved by the Institutional Animal Care and Use Committee (IACUC) and the P-3 Laboratory of Academia Sinica. Vaccinated Syrian hamsters were anesthetized and treated with 1 × 10 5 PFU of SARS-CoV-2 TCDC#4 (hCoV-19/Taiwan/4/2020, GISAID registration number: EPI_ISL_411927) (lot number: IBMS20200819, 8.0 × 10 5 PFU/mL in a volume of 125 μL) for intranasal challenge. All hamsters were weighed daily after SARS-CoV-2 challenge infection. Hamsters that survived the infection experiments were euthanized using carbon dioxide.

藉由細胞培養感染分析定量組織中之病毒力價Quantifying virus titer in tissues by cell culture infection assay

使用均質機將倉鼠組織在600 μL具有2% FBS及1%青黴素/鏈黴素之DMEM中均質化。將組織均質物以15,000 rpm離心5分鐘且收集上清液用於活病毒滴定。簡言之,將各樣品之10倍連續稀釋液一式四份地添加於Vero E6細胞單層上且生長4天。細胞隨後用10%甲醛固定且用0.5%結晶紫染色20分鐘。用自來水洗滌盤且對感染進行評分。藉由李-明二氏法計算50%組織培養感染劑量(TCID 50)/mL。 Homogenize hamster tissue in 600 μL of DMEM with 2% FBS and 1% penicillin/streptomycin using a homogenizer. The tissue homogenate was centrifuged at 15,000 rpm for 5 minutes and the supernatant was collected for viable virus titration. Briefly, 10-fold serial dilutions of each sample were added to Vero E6 cell monolayers in quadruplicate and grown for 4 days. Cells were then fixed with 10% formaldehyde and stained with 0.5% crystal violet for 20 minutes. Dishes were washed with tap water and infections were scored. The 50% tissue culture infectious dose (TCID 50 )/mL was calculated by the Li-Ming method.

用於used for SARS-CoV-2 RNASARS-CoV-2 RNA 定量之即時Quantitative real-time RT-PCRRT-PCR

為了量測SARS-CoV-2之RNA含量,藉由先前研究中所述之TaqMan即時RT-PCR方法( Corman 等人 , Euro Surveill 25, 2020),使用靶向SARS-CoV-2基因體之包膜(E)基因之26,141至26,253區域的特定引子。使用正向引子E-Sarbeco-F1 (5'-ACAGGTAC GTTAATAGTTA ATAGCGT-3', SEQ ID NO. 1)及反向引子E-Sarbeco-R2 (5'-ATATTGCAGCAGTACGCACACA-3', SEQ ID NO. 2),外加探針E-Sarbeco-P1 (5'-FAM-ACACTAGCCATCCTTACTGCGCTTCG (SEQ ID NO. 3)-BBQ-3')。根據製造商說明書,使用RNeasy Mini Kit (QIAGEN)自各樣品收集總共30 μL RNA溶液。將5 μL等分的RNA添加至Superscript III一步RT-PCR系統與Platinum Taq聚合酶(Thermo Fisher Scientific)之總共25 μL混合物中。最終反應混合物含有400 nM正向及反向引子、200 nM探針、1.6 mM去氧核苷三磷酸(dNTP)、4 mM硫酸鎂、50 nM ROX參考染料及1 μL酶混合物。循環條件使用一步PCR方案進行:55℃持續10分鐘以合成第一股cDNA,隨後在94℃下3分鐘,以及在94℃下15秒及在58℃下30秒進行45個擴增循環。由Applied Biosystems 7500即時PCR系統(Thermo Fisher Scientific)收集及計算資料。合成的113 bp寡核苷酸片段用作qPCR標準品,以校準病毒基因體之複本數。寡核苷酸由Genomics BioSci and Tech (Taipei, Taiwan)合成。 To measure the RNA content of SARS-CoV-2, a package targeting the SARS-CoV-2 genome was used by the TaqMan real-time RT-PCR method described in a previous study ( Corman et al ., Euro Surveill 25, 2020 ). Specific primer for the region 26,141 to 26,253 of the membrane (E) gene. Use forward primer E-Sarbeco-F1 (5'-ACAGGTAC GTTAATAGTTA ATAGCGT-3', SEQ ID NO. 1) and reverse primer E-Sarbeco-R2 (5'-ATATTGCAGCAGTACGCACACA-3', SEQ ID NO. 2) , plus probe E-Sarbeco-P1 (5'-FAM-ACACTAGCCATCCTTACTGCGCTTCG (SEQ ID NO. 3)-BBQ-3'). A total of 30 μL RNA solution was collected from each sample using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions. A 5 μL aliquot of RNA was added to a total of 25 μL mixture of the Superscript III one-step RT-PCR system and Platinum Taq polymerase (Thermo Fisher Scientific). The final reaction mixture contained 400 nM forward and reverse primers, 200 nM probe, 1.6 mM deoxynucleoside triphosphates (dNTPs), 4 mM magnesium sulfate, 50 nM ROX reference dye, and 1 μL enzyme mix. Cycling conditions were performed using a one-step PCR protocol: 55°C for 10 min to synthesize first-strand cDNA, followed by 3 min at 94°C, and 45 cycles of amplification at 94°C for 15 sec and at 58°C for 30 sec. Data were collected and calculated by an Applied Biosystems 7500 real-time PCR system (Thermo Fisher Scientific). The synthesized 113 bp oligonucleotide fragment was used as a qPCR standard to calibrate the number of viral genome copies. Oligonucleotides were synthesized by Genomics BioSci and Tech (Taipei, Taiwan).

組織病理學分析及Histopathological analysis and IHCIHC

組織在4%多聚甲醛中固定3天,轉移至PBS中,在7天內進行石蠟包埋,且以4 μm進行塊狀切片。載玻片在37℃下烘烤隔夜,隨後在二甲苯中去石蠟,且經由一系列分級乙醇至蒸餾水再水合。藉由蘇木精及伊紅染色(Muto Pure Chemicals)且隨後使用Tacha上藍溶液(Biocare)上藍進行組織病理學分析。對於SARS-CoV-2-N IHC,使用壓力釜在90℃下在Reveal Decloaker緩衝液(Biocare)中進行抗原修復15分鐘。對於CD3、MX1、IBA1及MPO IHC,使用壓力釜在85℃下在目標修復溶液pH 9.0 (Dako)中進行抗原修復10分鐘。載玻片用PBS洗滌且隨後用3%過氧化氫處理10分鐘。載玻片用PBS洗滌且用背景破壞劑(Innovex)進行阻斷1小時。將初級抗體抗SARS-CoV2 N (40588-T62,Sino Biological,1:500)、抗CD3 (ab16669,Abcam,1:50)、抗MX1 (13750-1-AP,Proteintech,1:100)、抗IBA1抗體(10904-1-AP,Proteintech,1:500)或抗MPO (ab208670,Abcam,1:500)在4℃下培育隔夜。應用多價二級抗體(Innovex) 15分鐘,且藉由過氧化物酶(Innovex)處理15分鐘。使用Betazoid DAB色素原套組,且隨後用蘇木精複染,接著使用Tacha上藍溶液(Biocare)上藍。Tissues were fixed in 4% paraformaldehyde for 3 days, transferred to PBS, embedded in paraffin within 7 days, and sectioned into blocks at 4 μm. Slides were baked at 37°C overnight, then deparaffinized in xylene and rehydrated through a graded series of ethanol to distilled water. Histopathological analysis was performed by hematoxylin and eosin staining (Muto Pure Chemicals) and subsequent blue staining using Tacha blue solution (Biocare). For SARS-CoV-2-N IHC, antigen retrieval was performed in Reveal Decloaker buffer (Biocare) using an autoclave at 90°C for 15 min. For CD3, MX1, IBA1, and MPO IHC, antigen retrieval was performed in target retrieval solution pH 9.0 (Dako) using an autoclave at 85°C for 10 min. Slides were washed with PBS and subsequently treated with 3% hydrogen peroxide for 10 minutes. Slides were washed with PBS and blocked with background destroyer (Innovex) for 1 hour. Primary antibodies anti-SARS-CoV2 N (40588-T62, Sino Biological, 1:500), anti-CD3 (ab16669, Abcam, 1:50), anti-MX1 (13750-1-AP, Proteintech, 1:100), anti- IBA1 antibody (10904-1-AP, Proteintech, 1:500) or anti-MPO (ab208670, Abcam, 1:500) was incubated overnight at 4°C. Multivalent secondary antibodies (Innovex) were applied for 15 minutes and treated with peroxidase (Innovex) for 15 minutes. The Betazoid DAB chromogen set was used and subsequently counterstained with hematoxylin, followed by bluing using Tacha bluing solution (Biocare).

統計分析Statistical analysis

使用GraphPad Prism 7.05 (GraphPad Software)進行分析。使用雙向方差分析(ANOVA)進行ELISpot、體重、病毒RNA、TCID 50及實質化的組間資料比較。CPE及假病毒中和力價係藉由單向ANOVA評定。中和資料經log 2轉換。病毒RNA及TCID 50經log 10轉換。小於0.05之P值視為顯著的。 Analyzes were performed using GraphPad Prism 7.05 (GraphPad Software). Two-way analysis of variance (ANOVA) was used to compare ELISpot, body weight, viral RNA, TCID 50 and substantive inter-group data. CPE and pseudovirus neutralizing potency were assessed by one-way ANOVA. Neutralization data were log 2 transformed. Viral RNA and TCID 50 were log 10 transformed. P values less than 0.05 were considered significant.

實例Example 11 在哺乳動物細胞中生產Produced in mammalian cells COVID-19 VLPCOVID-19 VLP

為了有效地大規模生產VLP抗原,藉由在基因體中定點插入基因簇以共表現SARS-CoV-2之刺突(S)、膜(M)及包封(E)蛋白來建立293F穩定單株細胞。將編碼融合前穩定的2P-S (SEQ ID NO: 8)及原生D614G變異體S (SEQ ID NO: 6)之S蛋白序列構築為VLP疫苗之抗原候選物(圖1A)。使用吾等平台,來自293F穩定單株細胞之VLP實現25至31 mg/L之高產量。使用抗S1及抗S2抗體藉由免疫螢光分析(IFA)偵測生產細胞中S蛋白之表現(圖1B)。而且,在自條件培養基中純化後,使用特異性抗體藉由西方墨點法分析VLP之S蛋白(圖1C及圖1D)。按照設計,S蛋白在2P-S中為全長S (約180K)或在D614G-S中蛋白裂解成S1 (100K)及S2 (85K),在分子量高於250K時偵測到一些寡聚物。兩種VLP (2P-S及D614G-S)均可由市售抗S1及抗S2以及來自恢復期COVID-19患者血漿之人類抗體識別。值得注意的是,藉由用還原劑處理VLP及煮沸使S蛋白變性破壞了S蛋白結構且減少了抗體之識別,抗S1比抗S2更顯著(圖1C及圖1D,以及圖6A及圖6B)。藉由對S蛋白信號(分別由S1及S2單株抗體偵測)求和且自重組S-2P蛋白之標準曲線內插,各VLP中S蛋白之含量定量為總VLP蛋白之約20% (平均為2P-S中19.3%及D614G-S中18.0%) (圖7A及圖7B)。使用動態光散射(DLS)分析,2P-S及D614G-S之平均粒徑分別為127.2及123.9 nm (圖1E)。藉由冷凍電子顯微鏡(冷凍EM)分析,2P-S及D614G-S之形態特徵在於清晰的刺突冠(圖1F)。雖然D614G-S VLP呈現可撓性刺突,此可能歸因於最近在柄(S2)域內鑑別之三個鉸鏈(髖、膝及踝)以不同角度傾斜的構形柔韌性,但2P-S呈現均勻的豎立刺突( Turonova 等人 , Science 370, 203-208, 2020)。此等結果表明2P-S VLP及D614G-S VLP分別呈現刺突直立突出與不同程度及方向的彎曲的全長融合前形式。 In order to efficiently produce VLP antigens on a large scale, 293F stable monomers were established by inserting gene clusters at specific sites in the genome to co-express the spike (S), membrane (M) and envelope (E) proteins of SARS-CoV-2. strain cells. The S protein sequences encoding pre-fusion stable 2P-S (SEQ ID NO: 8) and native D614G variant S (SEQ ID NO: 6) were constructed as antigen candidates for VLP vaccines (Figure 1A). Using our platform, VLPs from 293F stable monoline cells achieved high yields of 25 to 31 mg/L. The expression of S protein in producer cells was detected by immunofluorescence analysis (IFA) using anti-S1 and anti-S2 antibodies (Figure 1B). Furthermore, after purification from the conditioned medium, the S protein of the VLPs was analyzed by Western blotting using specific antibodies (Figure 1C and Figure 1D). According to the design, the S protein is full-length S (approximately 180K) in 2P-S or the protein is cleaved into S1 (100K) and S2 (85K) in D614G-S. Some oligomers are detected when the molecular weight is higher than 250K. Both VLPs (2P-S and D614G-S) are recognized by commercially available anti-S1 and anti-S2 as well as human antibodies from the plasma of convalescent COVID-19 patients. It is worth noting that denaturation of S protein by treating VLPs with reducing agents and boiling destroys the S protein structure and reduces antibody recognition. Anti-S1 is more significant than anti-S2 (Figure 1C and Figure 1D, and Figure 6A and Figure 6B ). By summing the S protein signals (detected by S1 and S2 monoclonal antibodies respectively) and interpolating from the standard curve of the recombinant S-2P protein, the S protein content in each VLP was quantified to be approximately 20% of the total VLP protein ( The average was 19.3% in 2P-S and 18.0% in D614G-S) (Figure 7A and Figure 7B). Using dynamic light scattering (DLS) analysis, the average particle sizes of 2P-S and D614G-S were 127.2 and 123.9 nm, respectively (Figure 1E). By cryo-electron microscopy (cryo-EM) analysis, the morphology of 2P-S and D614G-S was characterized by a clear spike crown (Figure 1F). Although the D614G-S VLP exhibits flexible spikes, which may be attributed to the conformational flexibility of the three recently identified hinges (hip, knee, and ankle) tilted at different angles within the stalk (S2) domain, the 2P- S presents uniform upright spikes ( Turonova et al. , Science 370, 203-208, 2020 ). These results indicate that 2P-S VLP and D614G-S VLP respectively present full-length pre-fusion forms with upright protrusions of spines and bends in varying degrees and directions.

實例Example 22 VLPVLP 在小鼠模型中誘導induced in mouse models Th1Th1 and Th2Th2 反應reaction

藉由疫苗接種誘發平衡的Th1/Th2反應為開發COVID-19疫苗之必要準則,以避免疫苗接種後Th2偏向反應誘發VAERD的可能性( Acosta 等人 , Clin Vaccine Immunol 23, 189-195, 2015Bottazzi 等人 , Microbes Infect 22, 403-404, 2020)。為了評定此等兩種VLP之潛力且確定VLP配方之有利佐劑以強化免疫反應,進行同源初打-加打疫苗接種策略,從而確定在C57BL/6小鼠模型中之免疫原性(圖2A)。吾等用僅含有0.75 μg (低)或2.25 μg (高) S蛋白之D614G-S VLP及含有0.75 μg S蛋白且佐以氫氧化鋁凝膠(明礬)或AddaVax之VLP對小鼠進行免疫。吾等使用D614G-S VLP作為診斷抗原,因為其與祖先野生型SARS-CoV-2相似。在ELISA分析中,用AddaVax作為佐劑之VLP誘導與明礬組相似的約2 × 10 5之高抗體力價,其高於無佐劑的VLP (在高劑量及低劑量抗原下分別為5 × 10 4及1 × 10 5) (表1)。在使用相同組之彙集抗血清的西方墨點分析中亦看到類似效果,其中在AddaVax及明礬組中看到更強的信號(圖2B)。另外,藉由ELISpot分析來分析細胞介導之免疫反應。有趣的是,單獨的D614G-S VLP可引發Th1及Th2反應,且僅AddaVax進一步增強IFNγ (Th1)反應。雖然明礬及AddaVax均增強IL-4 (Th2)反應,但AddaVax對IL-4之佐劑作用亦高於明礬(圖2C)。此等發現表明,VLP引發Th1及Th2反應,且AddaVax為一種比明礬更有效的佐劑來調配VLP疫苗。 1. 疫苗接種後之 ELISA 力價 物種 總IgG IgG1 IgG2+IgG3 C57BL/6 D614G-S-低 5 × 10 4 D614G-S-高 1 × 10 5 D614G-S+明礬 2 × 10 5 2P-S+明礬 2 × 10 5 D614G-S+AddaVax 2 × 10 5 2P-S+AddaVax 2 × 10 5 倉鼠 D614G-S+AddaVax 2.4 × 10 5 2 × 10 5 5 × 10 4 2P-S+AddaVax 2.4 × 10 5 2 × 10 5 7.5 × 10 4 Inducing a balanced Th1/Th2 response through vaccination is a necessary criterion for the development of a COVID-19 vaccine to avoid the possibility of VAERD induced by a Th2-biased response after vaccination ( Acosta et al ., Clin Vaccine Immunol 23, 189-195, 2015 ; Bottazzi et al. , Microbes Infect 22, 403-404, 2020 ). In order to evaluate the potential of these two VLPs and identify favorable adjuvants for the VLP formulation to enhance the immune response, a homologous prime-plus vaccination strategy was performed to determine the immunogenicity in the C57BL/6 mouse model (Figure 2A). We immunized mice with D614G-S VLPs containing only 0.75 μg (low) or 2.25 μg (high) S protein and VLPs containing 0.75 μg S protein supplemented with aluminum hydroxide gel (alum) or AddaVax. We used D614G-S VLP as the diagnostic antigen due to its similarity to the ancestral wild-type SARS-CoV-2. In ELISA analysis, VLPs adjuvanted with AddaVax induced high antibody titers of approximately 2 × 10 5 similar to the alum group, which was higher than VLPs without adjuvant (5 × at high and low doses of antigen, respectively). 10 4 and 1 × 10 5 ) (Table 1). A similar effect was seen in Western blot analysis using pooled antisera from the same group, with stronger signals seen in the AddaVax and Alum groups (Figure 2B). Additionally, cell-mediated immune responses were analyzed by ELISpot analysis. Interestingly, D614G-S VLP alone elicited both Th1 and Th2 responses, and only AddaVax further enhanced the IFNγ (Th1) response. Although both alum and AddaVax enhanced IL-4 (Th2) response, AddaVax had a greater adjuvant effect on IL-4 than alum (Figure 2C). These findings indicate that VLPs elicit Th1 and Th2 responses and that AddaVax is a more effective adjuvant than alum for formulating VLP vaccines. Table 1. ELISA price after vaccination Species group Total IgG IgG1 IgG2+IgG3 C57BL/6 D614G-S-Low 5 × 10 4 D614G-S-High 1 × 10 5 D614G-S+alum 2 × 10 5 2P-S+alum 2 × 10 5 D614G-S+AddaVax 2 × 10 5 2P-S+AddaVax 2 × 10 5 hamster D614G-S+AddaVax 2.4 × 10 5 2 × 10 5 5 × 10 4 2P-S+AddaVax 2.4 × 10 5 2 × 10 5 7.5 × 10 4

實例Example 33 use AddaVaxAddaVax 作為as 佐劑之Adjuvants VLPVLP 在倉鼠模型中誘導中和抗體Induction of neutralizing antibodies in hamster model

為了確定基於VLP之疫苗的保護效率,吾等隨後用AddaVax作為佐劑之VLP以等效於1.5 μg S蛋白之劑量對金色敍利亞倉鼠進行免疫。免疫及攻擊之方案展示於圖3A中。在初打-加打免疫後兩週,兩種疫苗均在血清中引發高IgG力價,在ELISA分析中約為2.4 × 10 5倍(表1)。對VLP疫苗誘導之IgG亞類的進一步診斷顯示,與2P-S及D614G-S組中分別為7.5 × 10 4及5 × 10 4之IgG2+IgG3 (Th1反應)力價相比,來自此等兩個疫苗組之抗血清包含更高的IgG1 (Th2反應)力價(2 × 10 5) (表1)。最初針對在Vero E6細胞感染SARS-CoV-2時觀察到的細胞病變效應(CPE)分析在追加疫苗接種後2週抽取之抗血清的NAb力價。2P-S組之NAb力價為約468,該力價比D614G-S組高4倍;D614G-S組10隻倉鼠中,有4隻的NAb力價低於80 (圖3B)。藉由S-假病毒中和分析,進一步分析縱向NAb力價與病毒S蛋白與宿主hACE2受體結合之相關性。在追加劑後2週,抑制90% S-假病毒感染所需之2P-S的NAb力價高於D614G-S及模擬組的NAb力價,且在追加劑後至少6週,NAb力價保持較高(圖3C)。在使用西方墨點分析之平行檢查中,2P-S組之抗血清主要識別D614G-S VLP內之S1次單元,其模擬病毒包膜。相比之下,D614G-S抗血清在追加疫苗接種後一週識別S1及S2,但主要識別信號在追加劑後三週自S1轉移至S2 (圖3D)。此等結果表明,與可能改變抗體之抗原決定基目標的D614G-S疫苗相比,用AddaVax作為佐劑之2P-S能夠引發更高力價的NAb及對S1之穩定識別。 To determine the protective efficiency of the VLP-based vaccine, we subsequently immunized golden Syrian hamsters with AddaVax-adjuvanted VLP at a dose equivalent to 1.5 μg of S protein. The immunization and challenge scheme is shown in Figure 3A. Two weeks after primary-additional immunization, both vaccines elicited high IgG titers in serum, approximately 2.4 × 10 5 -fold in ELISA analysis (Table 1). Further diagnosis of the IgG subclasses induced by the VLP vaccine showed that compared with the IgG2+IgG3 (Th1 response) valence of 7.5 × 10 4 and 5 × 10 4 in the 2P-S and D614G-S groups, respectively Antisera from both vaccine groups contained higher IgG1 (Th2 response) titers (2 × 10 5 ) (Table 1). Antisera drawn 2 weeks after booster vaccination were initially analyzed for NAb potency against the cytopathic effect (CPE) observed in Vero E6 cells infected with SARS-CoV-2. The NAb titer of the 2P-S group was approximately 468, which was 4 times higher than that of the D614G-S group. Among the 10 hamsters in the D614G-S group, 4 had NAb titers lower than 80 (Figure 3B). Through S-pseudovirus neutralization analysis, the correlation between the longitudinal NAb titer and the binding of viral S protein to the host hACE2 receptor was further analyzed. At 2 weeks after the booster dose, the NAb potency of 2P-S required to inhibit 90% of S-pseudovirus infection was higher than that of the D614G-S and simulation groups, and at least 6 weeks after the booster dose, the NAb potency remain high (Figure 3C). In a parallel examination using Western blot analysis, the antisera of the 2P-S group primarily recognized the S1 subunit within the D614G-S VLP, which mimics the viral envelope. In contrast, the D614G-S antiserum recognized S1 and S2 one week after the booster dose, but the main recognition signal shifted from S1 to S2 three weeks after the booster dose (Fig. 3D). These results indicate that 2P-S adjuvanted with AddaVax is able to elicit higher potency NAb and stable recognition of S1 compared to the D614G-S vaccine, which may alter the epitope target of the antibody.

實例Example 44 use AddaVaxAddaVax 作為佐劑之as an adjuvant VLPVLP 在倉鼠模型中防止攻擊後之病毒複製及Prevents post-challenge viral replication in a hamster model and COVID-19COVID-19 症狀Symptoms

為了評定VLP疫苗之預防功效,經PBS (模擬)、用AddaVax作為佐劑之2P-S及D614G-S免疫之倉鼠在追加疫苗接種後46天藉由鼻內接種1 × 10 5斑塊形成單位(PFU)之SARS-CoV-2進行攻擊,且在感染後3天(3 dpi)及6 dpi進行屍體解剖(圖4A)。病毒感染導致所有經模擬(PBS)疫苗接種之倉鼠的體重顯著下降。相反,大多數接種2P-S疫苗之倉鼠及一半接種D614G-S疫苗之倉鼠自感染後2天開始體重增加(圖4A至圖4D)。在3 dpi及6 dpi,基於SARS-CoV-2之病毒RNA (vRNA,E基因)及複製勝任型病毒(組織培養感染劑量,TCID 50),在肺及十二指腸中診斷出病毒複製、發炎及病理。兩種疫苗均在3 dpi時減少肺中之vRNA。雖然2P-S在3 dpi時抑制肺vRNA合成方面似乎比D614G-S更有效,但由於D614G-S之變化大,差異未達到統計顯著性(圖4E)。在6 dpi,2P-S肺之vRNA含量僅為模擬含量之0.01%且接近於偵測極限,而D614G-S肺為模擬含量之0.1% (圖4E)。十二指腸中之vRNA低,且兩種疫苗之效果相似。與模擬肺中之高TCID 50(3 dpi時為2.3 × 10 6,6 dpi時為7.5 × 10 3)相比,2P-S及D614G-S在3 dpi時均將肺TCID 50大幅抑制在不同含量,且在6 dpi時幾乎均偵測到低於或接近100倍(最小稀釋),而所有組之十二指腸的病毒力價均太低,在接種疫苗後偵測不到任何TCID 50降低(圖4F)。此等結果表明,AddaVax作為佐劑之2P-S及D614G-S均有效地減少SARS-CoV-2之病毒複製及感染。 To assess the preventive efficacy of the VLP vaccine, hamsters immunized with PBS (mock), 2P-S and D614G-S adjuvanted with AddaVax were intranasally inoculated with 1 × 10 5 plaque-forming units 46 days after booster vaccination. (PFU) of SARS-CoV-2, and autopsies were performed at 3 days post-infection (3 dpi) and 6 dpi (Fig. 4A). Viral infection resulted in significant weight loss in all mock (PBS) vaccinated hamsters. In contrast, most of the hamsters vaccinated with 2P-S and half of the hamsters vaccinated with D614G-S began to gain weight 2 days after infection (Figure 4A to Figure 4D). Viral replication, inflammation, and pathology were diagnosed in lungs and duodenum at 3 and 6 dpi based on SARS-CoV-2 viral RNA (vRNA, E gene) and replication-competent virus (tissue culture infectious dose, TCID 50 ) . Both vaccines reduced vRNA in the lungs at 3 dpi. Although 2P-S appeared to be more effective than D614G-S in inhibiting lung vRNA synthesis at 3 dpi, the difference did not reach statistical significance due to the large changes in D614G-S (Fig. 4E). At 6 dpi, the vRNA content in the 2P-S lung was only 0.01% of the simulated content and close to the detection limit, while the vRNA content in the D614G-S lung was 0.1% of the simulated content (Figure 4E). vRNA was low in the duodenum, and the efficacy of the two vaccines was similar. Compared with the high TCID 50 in simulated lungs (2.3 × 10 6 at 3 dpi and 7.5 × 10 3 at 6 dpi), both 2P-S and D614G-S significantly suppressed lung TCID 50 at different levels at 3 dpi. content, and almost all were detected below or close to 100-fold (minimum dilution) at 6 dpi, while the duodenal viral titers in all groups were too low to detect any decrease in TCID 50 after vaccination (Figure 4F). These results indicate that both 2P-S and D614G-S used as adjuvants by AddaVax can effectively reduce viral replication and infection of SARS-CoV-2.

實例Example 55 VLPVLP 疫苗保護倉鼠Vaccine protects hamsters 免受free from COVID-19COVID-19 肺炎pneumonia

為了進一步研究VLP疫苗之安全性及有效性,吾等使用H&E染色及免疫組織化學(IHC)在3及6 dpi時仔細檢查了經疫苗接種之感染及未感染倉鼠之肺組織的組織病理學及免疫反應。吾等觀察到未感染倉鼠之肺中無實質化、發炎或異常,表明兩種VLP疫苗均為安全的(圖8A及圖8B)。在SARS-CoV-2感染後,PBS組之組織病理學肺實質化最初在3 dpi時為輕度的且在6 dpi時進展為重度的,而實質化在疫苗接種組中大大減弱(圖5A及圖5B)。在D614G-S肺中,實質化在3 dpi時為輕度的且一些在6dpi時進展為中度合併間質性肺炎之彌漫性病變;另一方面,除一個(n=5)在6 dpi時表現出中度實質化外,所有2P-S肺在整個6 dpi期間顯示出極少或沒有病毒性間質性肺炎的證據(圖5B)。原位病毒複製由SARS-CoV-N之IHC指示,氣道周圍的肺泡水腫中之深色及彌漫性SARS-CoV-N在3 dpi時出現在PBS肺中,且在整個6 dpi期間消退但仍然可見。相比之下,SARS-CoV-N在3 dpi時僅限於2P-S肺中之孤立細胞及D614G-S肺中之小團簇,且在6 dpi時兩個疫苗接種組均完全澄清(圖5C)。I型及III型干擾素為對病毒感染有反應的一般一線防禦且有可能抑制SARS-CoV-2之感染及複製( Vanderheiden 等人 , J Virol 94, 2020)。為了反映宿主肺中之干擾素反應、先天性及後天性免疫,吾等隨後藉由IHC染色及分析感染倉鼠之肺樣本,檢查干擾素誘導之MX1表現及發炎細胞、MPO +嗜中性球、IBA1 +巨噬細胞/單核球及CD3 +T淋巴細胞之浸潤。在PBS肺中,MX1在3 dpi時在感染區的一些肺泡上皮細胞中表現,在6 dpi時在肺泡間隔增厚區以較低量廣泛表現,而MX1表現在3 dpi時限於2P-S及D614G-S肺之感染區(支氣管周圍)的較低的量及密度,在6 dpi時在2P-S肺中減少,但仍可在D614G-S肺中一些增生性肺細胞中觀察到(圖5D)。在3 dpi時在PBS及D614G-S肺中亦偵測到MPO +嗜中性球(另一種專業吞噬細胞)的小團簇,且在6 dpi時在D614G-S肺之發炎區觀察到更多團簇。然而,在6 dpi時在2P-S肺中未偵測到巨噬細胞及嗜中性球之團簇(圖5E)。在3 dpi時,在兩個疫苗接種組中發現一些巨噬細胞/單核球團簇浸潤且散佈於氣道周圍的間質中;然而,在PBS肺中且在較低程度上在D614G-S肺中,巨噬細胞的浸潤在6 dpi時累積且聚集在肺炎病灶中,表明有吞噬活動(圖5F)。在PBS肺中,CD3+ T淋巴細胞浸潤在3 dpi時為分散的。伴隨著肺炎的發展,T細胞的浸潤在6 dpi時累積且分散在增厚的肺泡間質中。在接種2P-S之個體中,與PBS組不同,CD3 +T細胞主要局部分散在肺部氣道上皮中,且在整個6 dpi期間保持不變。然而,在接種D614G-S之個體中,一些CD3 +T淋巴細胞在3 dpi時在氣道周圍的肺間質中擴散,進一步累積,且在6 dpi時在肺泡中廣泛擴散,表明由病毒感染誘導之T細胞的活化、擴增及浸潤(圖5G)。此等結果表明,2P-S及D614G-S疫苗經由不同的機制防止病毒感染、擴散及肺炎。2P-S疫苗經由NAb阻斷病毒與宿主受體的結合保護倉鼠免於疾病,從而有效地防止病毒的早期複製及隨後的炎症,而D614G-S疫苗可能亦參與使用T淋巴細胞反應及由巨噬細胞/單核球及嗜中性球介導之抗體依賴性吞噬作用來清除病毒及受感染細胞。 To further investigate the safety and efficacy of the VLP vaccine, we carefully examined the histopathology and lung tissue of vaccinated infected and uninfected hamsters at 3 and 6 dpi using H&E staining and immunohistochemistry (IHC). immune response. We observed no solidification, inflammation, or abnormalities in the lungs of uninfected hamsters, indicating that both VLP vaccines are safe (Figure 8A and Figure 8B). After SARS-CoV-2 infection, histopathological lung parenchyma in the PBS group was initially mild at 3 dpi and progressed to severe at 6 dpi, whereas parenchyma was greatly attenuated in the vaccinated group (Fig. 5A and Figure 5B). In D614G-S lungs, parenchyma was mild at 3 dpi and some progressed to moderate diffuse disease with interstitial pneumonitis at 6 dpi; on the other hand, all but one (n=5) at 6 dpi In addition to exhibiting moderate parenchymalization, all 2P-S lungs showed little or no evidence of viral interstitial pneumonia throughout 6 dpi (Fig. 5B). In situ viral replication was indicated by IHC of SARS-CoV-N, dark and diffuse SARS-CoV-N in alveolar edema around the airways that appeared in PBS lungs at 3 dpi and resolved throughout 6 dpi but remained Visible. In contrast, SARS-CoV-N was restricted to isolated cells in 2P-S lungs and small clusters in D614G-S lungs at 3 dpi, and was completely clear in both vaccinated groups at 6 dpi (Figure 5C). Type I and III interferons are general first-line defenses in response to viral infection and may inhibit SARS-CoV-2 infection and replication ( Vanderheiden et al ., J Virol 94, 2020 ). In order to reflect the interferon response, innate and acquired immunity in the host lung, we then performed IHC staining and analysis of lung samples from infected hamsters to examine interferon-induced MX1 expression and inflammatory cells, MPO + neutrophils, Infiltration of IBA1 + macrophages/monocytes and CD3 + T lymphocytes. In PBS lungs, MX1 was expressed in some alveolar epithelial cells in the infected area at 3 dpi and extensively in lower amounts in the thickened alveolar septa at 6 dpi, whereas MX1 expression at 3 dpi was restricted to 2P-S and The lower volume and density of the infected area (peribronchial) in D614G-S lungs was reduced in 2P-S lungs at 6 dpi, but could still be observed in some proliferative pneumocytes in D614G-S lungs (Fig. 5D). Small clusters of MPO + neutrophils (another professional phagocyte) were also detected in PBS and D614G-S lungs at 3 dpi, and more were observed in the inflamed areas of D614G-S lungs at 6 dpi. Multiple clusters. However, no clusters of macrophages and neutrophils were detected in 2P-S lungs at 6 dpi (Fig. 5E). At 3 dpi, some macrophage/monocyte clusters were found to infiltrate and disperse in the interstitium surrounding the airways in both vaccinated groups; however, in PBS lungs and to a lesser extent in D614G-S In the lungs, macrophage infiltration accumulated at 6 dpi and clustered in pneumonia lesions, indicating phagocytic activity (Fig. 5F). In PBS lungs, CD3+ T lymphocyte infiltration was dispersed at 3 dpi. As pneumonia progresses, T cell infiltration accumulates at 6 dpi and is dispersed in the thickened alveolar interstitium. In individuals vaccinated with 2P-S, unlike the PBS group, CD3 + T cells were mainly locally dispersed in the lung airway epithelium and remained unchanged throughout 6 dpi. However, in individuals vaccinated with D614G-S, some CD3 + T lymphocytes diffused in the lung interstitium around the airways at 3 dpi, further accumulated, and diffused extensively in the alveoli at 6 dpi, suggesting induction by viral infection. The activation, expansion and infiltration of T cells (Figure 5G). These results indicate that 2P-S and D614G-S vaccines prevent viral infection, spread and pneumonia through different mechanisms. The 2P-S vaccine protects hamsters from disease by blocking the binding of the virus to host receptors via NAb, thereby effectively preventing early viral replication and subsequent inflammation, while the D614G-S vaccine may also be involved in the use of T lymphocyte responses and activation by giant Antibody-dependent phagocytosis mediated by phagocytes/monocytes and neutrophils eliminates viruses and infected cells.

實例Example 66 衍生自Derived from SARS-CoV-2SARS-CoV-2 Of DeltaDelta and OmicronOmicron 變異體之Variant of VLPVLP 的生產。of production.

進一步工程改造基於SARS-CoV-2之Delta及Omicron變異體之刺突蛋白序列的兩個系列VLP。生產細胞株之單株細胞係按照先前所述之方法建立及分離。攜帶所標記之不同突變的S蛋白,包括原始Delta、GSAS-2P及GSAS突變體,連同M及E蛋白之共表現產生三種不同的Delta-VLP。圖9A至圖9C展示使用抗S1及抗S2抗體藉由免疫墨點法對S蛋白的表徵,以及藉由冷凍電子顯微鏡對各別VLP之球形形態的表徵。藉由動態光散射(DLS)分析,原始、GSAS-2P及GSAS突變體之Delta VLP的平均直徑分別為87.9 ± 0.6 nm、96.5 ± 0.8 nm及114.7 ± 0.4 nm。類似地,吾等藉由共表現攜帶所標記之不同突變之Omicron S以及M及E蛋白來生產Omicron VLP (圖9A至圖9D)。對於原始、2P-S、RQSR-2P-S及GSAS-2P-S突變體,衍生自S、M及E蛋白之Omicron VLP的平均直徑分別為114.8 ± 0.8 nm、109.3 ± 0.4 nm、110.7 ± 0.7 nm及96.4 ± 0.4 nm。 Two series of VLPs were further engineered based on the spike protein sequences of the Delta and Omicron variants of SARS-CoV-2. Production cell lines Individual cell lines were established and isolated as previously described. Co-expression of S proteins carrying tagged different mutations, including original Delta, GSAS-2P and GSAS mutants, together with M and E proteins, resulted in three different Delta-VLPs. Figures 9A to 9C show the characterization of the S protein by immunoblotting using anti-S1 and anti-S2 antibodies, and the characterization of the spherical morphology of respective VLPs by cryo-electron microscopy. By dynamic light scattering (DLS) analysis, the average diameters of Delta VLPs of original, GSAS-2P and GSAS mutants were 87.9 ± 0.6 nm, 96.5 ± 0.8 nm and 114.7 ± 0.4 nm, respectively. Similarly, we produced Omicron VLPs by co-expressing Omicron S and M and E proteins carrying different mutations of the markers (Figure 9A-9D). The average diameters of Omicron VLPs derived from S, M, and E proteins were 114.8 ± 0.8 nm, 109.3 ± 0.4 nm, and 110.7 ± 0.7 for the original, 2P-S, RQSR-2P-S, and GSAS-2P-S mutants, respectively. nm and 96.4 ± 0.4 nm.

實例Example 77 SS 蛋白之過度表現足以驅動Overexpression of protein is enough to drive VLPVLP 自動物細胞中釋放。Released from animal cells.

吾等對293F細胞株中過度表現祖先S、M及E蛋白所衍生之VLP的蛋白質體分析顯示,M及E蛋白之含量非常低且幾乎偵測不到。因此,吾等研究僅表現S蛋白是否可驅動VLP自轉殖基因細胞出芽。有趣的是,僅在293F細胞株中過度表現S蛋白亦產生VLP且在培養基中釋放,包括祖先S (野生型) (SEQ ID NO: 10)及其GSGS-2P-S突變體(SEQ ID NO: 12)、Omicron S (原始) (SEQ ID NO:14)以及Omicron 2P-S及RQSR-S (SEQ ID NO: 16)突變體(圖10E至圖10G)。純化後,對於原始、2P-S及RQSR-2P-S突變體,僅衍生自Omicron S蛋白之Omicron VLP的平均直徑分別為105.5 ± 0.4 nm、114.1 ± 1.0 nm及124.4 ± 0.5 nm (圖10E至圖10G)。此為第一個證據表明,僅過度表現冠狀病毒之S蛋白足以驅動細胞內冠狀類病毒顆粒之出芽,且在細胞外空間及細胞培養基中有效地釋放VLP (圖10H)。Our proteome analysis of VLPs derived from overexpressing ancestral S, M and E proteins in the 293F cell line showed that the levels of M and E proteins were very low and almost undetectable. Therefore, our study only showed whether the S protein can drive VLP budding from transgenic cells. Interestingly, only VLPs overexpressing S protein in the 293F cell line also produce VLPs and are released in the culture medium, including ancestral S (wild type) (SEQ ID NO: 10) and its GSGS-2P-S mutant (SEQ ID NO : 12), Omicron S (original) (SEQ ID NO: 14), and Omicron 2P-S and RQSR-S (SEQ ID NO: 16) mutants (Figure 10E to Figure 10G). After purification, the average diameters of Omicron VLPs derived only from Omicron S protein were 105.5 ± 0.4 nm, 114.1 ± 1.0 nm, and 124.4 ± 0.5 nm for the original, 2P-S, and RQSR-2P-S mutants, respectively (Figure 10E to Figure 10G). This is the first evidence that overexpression of coronavirus S protein alone is sufficient to drive budding of intracellular coronavirus virions and efficient release of VLPs in the extracellular space and cell culture medium (Figure 10H).

實例 8 Omicron 變異體之 VLP 引發中和抗體之能力降低。候選疫苗之評定係藉由在小鼠模型中使用初打-加打(2次注射)疫苗方案進行免疫來進行。與衍生自祖先S蛋白序列之2P-S VLP相比,衍生自Delta及Omicron變異體及突變體之S蛋白之VLP與AS03樣佐劑(由RuenHuei Biopharmaceuticals Inc.提供之角鯊烯-水包油製劑)的調配物表現出低得多的免疫原性。因此,將Omicron VLP劑量提高至五倍(含有3.75 μg S蛋白/小鼠)及將祖先2P-S VLP (含有0.75 μg S蛋白/小鼠)調配/不調配成二價疫苗為吾等在動物實驗中對新疫苗或追加疫苗之策略。雌性 K18-hACE2[B6.Cg-Tg(K18-ACE2)2Prlmn/J]小鼠(n = 7或8,8週齡)用單價Omicron S VLP (野生型BA.1或其RQSR-2P突變體),及其與祖先2P-S VLP (1:5 W/W)混合AS03樣佐劑(1:1,V/V)之組合作為各自的二價疫苗在第0天及第21天進行皮下注射,且在第35天抽血。在ELISA中,針對Omicron-wt-S VLP之彙集抗血清的特異性IgG力價達到GMT:2 × 10 5。由O-RQSR-2P-S及兩種二價疫苗之50%假病毒中和力價(PVNT 50)指示之免疫血清針對Omicron BA.1假型慢病毒之中和效力顯著高於O-wt-S。二價疫苗(Omicron 2P-S及Omicron O-wt-S或O-RQSR-2P-S)針對經疫苗接種小鼠之BA.5的PVNT 50引發的中和力價顯著高於單價組,表明由於祖先2P-S VLP引起之交叉保護性抗體的貢獻(圖10I)。相比之下,此等用MF59樣佐劑調配之VLP產生的中和力價較低(資料未展示)。吾等資料表明,Omicron VLP (含有3.75 μg S蛋白/小鼠)之免疫原性減弱需要用更有效的佐劑進行調配,諸如AS03樣角鯊烯-水包油型乳液或其他,以刺激高力價中和抗體。資料表明,呈現具有RQSR-2P突變之Omicron S的VLP可有效地構成菌株匹配之疫苗。 Example 8 Omicron variant VLPs have reduced ability to elicit neutralizing antibodies. Vaccine candidates are evaluated by immunizing mice using a prime-plus (2 injections) vaccine schedule. VLPs derived from Delta and Omicron variants and mutants of S protein with AS03-like adjuvant (squalene-oil-in-water provided by RuenHuei Biopharmaceuticals Inc.) compared to 2P-S VLPs derived from ancestral S protein sequences. formulations) showed much lower immunogenicity. Therefore, increasing the dose of Omicron VLP to five times (containing 3.75 μg S protein/mouse) and formulating/not formulating the ancestral 2P-S VLP (containing 0.75 μg S protein/mouse) into a bivalent vaccine provided the best results for our studies in animals. Strategies for new or additional vaccines in experiments. Female K18-hACE2 [B6.Cg-Tg(K18-ACE2)2Prlmn/J] mice (n = 7 or 8, 8 weeks old) were treated with monovalent Omicron S VLP (wild-type BA.1 or its RQSR-2P mutant ), and their combination with ancestral 2P-S VLP (1:5 W/W) mixed with AS03-like adjuvant (1:1, V/V) as respective bivalent vaccines were administered subcutaneously on days 0 and 21 injection, and blood was drawn on day 35. In ELISA, the specific IgG potency of pooled antisera against Omicron-wt-S VLP reached GMT: 2 × 10 5 . The neutralizing potency of the immune serum indicated by the 50% pseudovirus neutralizing potency (PVNT 50 ) of O-RQSR-2P-S and the two bivalent vaccines against Omicron BA.1 pseudotyped lentivirus was significantly higher than that of O-wt -S. The neutralizing power of the bivalent vaccine (Omicron 2P-S and Omicron O-wt-S or O-RQSR-2P-S) against the PVNT 50 of BA.5 in vaccinated mice was significantly higher than that of the monovalent group, indicating that Contribution due to cross-protective antibodies arising from the ancestral 2P-S VLP (Fig. 10I). In comparison, these VLPs formulated with MF59-like adjuvants produced lower neutralizing potency (data not shown). Our data suggest that the attenuated immunogenicity of Omicron VLPs (containing 3.75 μg S protein/mouse) requires formulation with more effective adjuvants, such as AS03-like squalene-oil-in-water emulsions or others, to stimulate high Neutralizing antibodies. Data indicate that VLPs presenting Omicron S with the RQSR-2P mutation can effectively constitute a strain-matched vaccine.

實例Example 99 H5N2H5N2 class 流感病毒顆粒之生產。Production of influenza virus particles.

捕獲允許在人類capture allowed in humans FreeStyle 293FFreeStyle 293F 及昆蟲and insects High-FiveHigh-Five 細胞株中最高位準之誘導型外源基因表現的染色體基因位點The highest level of chromosomal gene loci expressing inducible foreign genes in cell lines

為了使用人類293F細胞株及昆蟲High-Five細胞株生產H5N2流感病毒(A/duck/Taiwan/01006/2015/H5N2)之VLP,吾等構築經設計用於在哺乳動物及昆蟲表現系統中進行GFP之多西環素誘導型表現的質體。特別地,驅動昆蟲細胞表現之啟動子需要自花旗松毒蛾多衣殼核多角體病毒(OpMNPV)立即早期2 (IE2)之基因啟動子修改為多西環素誘導型強啟動子及自姬透目天蠶蛾 肌動蛋白 A1之基因啟動子修改為多西環素誘導型弱啟動子。原則上,組成型表現之Tet抑制子經由與插入TATA盒下游之 tet操縱子2 (TetO2)結合來抑制IE2及姬透目天蠶蛾 肌動蛋白 A1啟動子之表現,直至Tet抑制子藉由多西環素處理釋放。吾等隨後藉由使用FreeStyle MAX試劑在FreeStyle 293F中穩定轉染來製備創始細胞。藉由流動式細胞測量術輔助細胞分選(FACS)兩次富集呈現低基礎及高誘導之GFP表現之表型的細胞。自富集的細胞中分離單株細胞,以獲得最佳創始細胞株。 In order to produce VLPs of H5N2 influenza virus (A/duck/Taiwan/01006/2015/H5N2) using the human 293F cell line and the insect High-Five cell line, we constructed a construct designed to perform GFP in mammalian and insect expression systems. Doxycycline-inducible expression of plastids. In particular, the promoter driving expression in insect cells needs to be modified from the gene promoter of the Douglas-fir polyhedral multicapsid nuclear polyhedrosis virus (OpMNPV) immediate early 2 (IE2) to a strong doxycycline-inducible promoter and from The promoter of the actin A1 gene of the Cecropia moth was modified into a doxycycline-inducible weak promoter. In principle, the constitutively expressed Tet repressor inhibits the expression of IE2 and the Cecropia actin A1 promoter by binding to the tet operator 2 (TetO2) inserted downstream of the TATA box until the Tet repressor is activated by multiple Released by cerebrocycline treatment. We then prepared founder cells by stable transfection in FreeStyle 293F using FreeStyle MAX reagent. Cells exhibiting phenotypes of low basal and high induced GFP expression were twice enriched by flow cytometry-assisted cell sorting (FACS). Isolate individual cells from the enriched cells to obtain the best founder cell line.

工程改造攜帶Engineering transformation and carrying FRTFRT 側接之數個轉殖基因卡匣簇、Several transgenic gene cassette clusters are flanked, CMV/TOCMV/TO 啟動子驅動且表現Promoter-driven and expressive 33 or 44 個病毒結構蛋白之供體質體Donor plasmid for viral structural proteins

眾所周知,在相同哺乳動物細胞中共表現S、M、E及/或N蛋白會將VLP釋放至細胞培養基中。因此,吾等構築CMV/TO驅動之M-IRES-E、S,有/無N,分佈於同一質體中之2或3個串聯基因中。整個轉殖基因簇上下游毗鄰兩個 FRT位點(F及Fn)以成為FLPe重組酶之目標卡匣。H5蛋白之序列顯示為SEQ ID NO: 18;N2蛋白之序列顯示為SEQ ID NO: 20;M1蛋白之序列顯示為SEQ ID NO: 22);且M2蛋白之序列顯示為SEQ ID NO: 24。 It is known that co-expression of S, M, E and/or N proteins in the same mammalian cells releases VLPs into the cell culture medium. Therefore, we constructed CMV/TO driven M-IRES-E, S, with/without N, distributed in 2 or 3 tandem genes in the same plastid. The entire transgenic gene cluster is adjacent to two FRT sites (F and Fn) upstream and downstream to become the target cassette of FLPe recombinase. The sequence of the H5 protein is shown as SEQ ID NO: 18; the sequence of the N2 protein is shown as SEQ ID NO: 20; the sequence of the M1 protein is shown as SEQ ID NO: 22); and the sequence of the M2 protein is shown as SEQ ID NO: 24.

經由與via FLPeFLP 重組酶共轉染「基因交換」供體卡匣以實現所有轉殖基因之位點特異性插入。Recombinase is co-transfected with a "gene exchange" donor cassette to achieve site-specific insertion of all transgenic genes.

供體質體及FLPe表現質體分別共轉染至衍生自人類FreeStyle 293F及昆蟲High-Five細胞株之創始細胞株中。使用FACS對經轉染細胞進行擴增且藉由GFP缺失表達進行富集。藉由H5N2流感VLP中GFP缺失及HA獲得表現再次分選富集的細胞。分離基因交換細胞之單株細胞,且篩選在多西環素誘導2天後具有最高HA表現量及背景GFP表現量之單株細胞。在不存在多西環素之情況下,HA應表現出低水準染色。使用此「快速多基因過度表現系統」,吾等產生穩定的生產VLP之293F單株細胞。Donor plasmids and FLPe expression plasmids were co-transfected into founder cell lines derived from human FreeStyle 293F and insect High-Five cell lines, respectively. Transfected cells were amplified using FACS and enriched by GFP deletion expression. Cells that showed re-sorting and enrichment were obtained by deleting GFP and HA in H5N2 influenza VLPs. A single cell line of the gene exchange cells was isolated, and the single cell line with the highest HA expression amount and background GFP expression amount after 2 days of doxycycline induction was screened. In the absence of doxycycline, HA should show low levels of staining. Using this "rapid multigene overexpression system", we generated stable VLP-producing 293F monoline cells.

H5N2H5N2 流感influenza VLPVLP 之生產及純化。production and purification.

在FreeStyle™ 293表現培養基中之無血清懸浮細胞培養中,將穩定的VLP生產單株細胞(#71)擴增至2×10 6個細胞/毫升密度。藉由向細胞培養物中添加1 µg/mL工作濃度之多西環素來啟動VLP之表現及釋放。293F細胞在健康指數生長期之倍增時間為22至28小時。細胞密度在震盪或旋轉培養中可保持在至多3 × 10 6個細胞/毫升且在生物反應器培養中可保持在至多4 × 10 6個細胞/毫升。培養基每3天更新一次,且自條件培養基中收集VLP,經由0.45 µm過濾以移除細胞碎片及其他大的聚集物,藉由切向流過濾(TFF)濃縮,且最後藉由兩步蔗糖梯度(30%且隨後40%-60%)超速離心或1步管柱層析Capto Core 700多模態(MMC)及透濾,或使用Capto DeVirS及Capto Core 700之2步管柱層析進行純化,以消除大部分生物雜質。 A stable VLP-producing single cell line (#71) was expanded to a density of 2 × 10 cells/ml in serum-free suspension cell culture in FreeStyle™ 293 Expression Medium. VLP expression and release are initiated by adding a working concentration of 1 µg/mL doxycycline to cell cultures. The doubling time of 293F cells in the healthy exponential growth phase is 22 to 28 hours. Cell density can be maintained at up to 3 × 10 6 cells/ml in shaking or rotating cultures and up to 4 × 10 6 cells/ml in bioreactor cultures. The medium was refreshed every 3 days, and VLPs were collected from the conditioned medium, filtered through 0.45 µm to remove cell debris and other large aggregates, concentrated by tangential flow filtration (TFF), and finally passed through a two-step sucrose gradient. (30% and then 40%-60%) ultracentrifugation or 1-step column chromatography Capto Core 700 Multimodal (MMC) and diafiltration, or 2-step column chromatography using Capto DeVirS and Capto Core 700 for purification , to eliminate most biological impurities.

結果展示於圖11A至圖11H中。成功地生產及純化H5N2流感VLP。The results are shown in Figures 11A to 11H. Successfully produced and purified H5N2 influenza VLPs.

雖然本發明已結合所闡述之特定實施例進行描述,但其許多替代方案及其修改及變化對於一般熟習此項技術者而言將為顯而易見的。所有此類替代方案、修改及變化被視為屬於本發明之範疇內。Although the invention has been described in connection with the specific embodiments illustrated, many alternatives, modifications and variations thereof will be apparent to those of ordinary skill in the art. All such alternatives, modifications and variations are deemed to be within the scope of this invention.

圖1A至圖1F展示來自293F穩定單株細胞之2P-S VLP及D614G-S VLP的產生及表徵。圖1A展示2P-S VLP及D614G-S VLP中刺突之形式。TM,跨膜區;CT,細胞質域。圖1B展示用抗S1、抗S2抗體及DAPI在穩定表現SARS-CoV-2之不同刺突的293F穩定細胞株中的免疫螢光染色。圖1C及圖1D展示2P-S VLP (圖1C)及D614G-S VLP (圖1D)在西方墨點法中由抗S1及S2抗體偵測到。VLP樣品在上樣前經不還原及不煮沸(N)、不還原及煮沸(NB)以及還原及煮沸(RB)處理。圖1E展示VLP之物理分析係藉由動態光散射(DLS)確定。圖1F展示經由2P-S VLP及D614G-S VLP之冷凍電子顯微鏡斷層掃描的中心切片。在兩個VLP之表面上均可觀察到刺突之分佈。比例尺:100 nm。Figures 1A to 1F show the production and characterization of 2P-S VLPs and D614G-S VLPs from 293F stable monoline cells. Figure 1A shows the pattern of spikes in 2P-S VLP and D614G-S VLP. TM, transmembrane domain; CT, cytoplasmic domain. Figure 1B shows immunofluorescence staining with anti-S1, anti-S2 antibodies and DAPI in the 293F stable cell line stably expressing different spikes of SARS-CoV-2. Figures 1C and 1D show that 2P-S VLPs (Figure 1C) and D614G-S VLPs (Figure 1D) were detected by anti-S1 and S2 antibodies in Western blotting. VLP samples were treated with no reduction and no boiling (N), no reduction and boiling (NB), and reduction and boiling (RB) before loading. Figure 1E shows physical analysis of VLPs determined by dynamic light scattering (DLS). Figure 1F shows central sections through cryo-electron microscopy tomography of 2P-S VLP and D614G-S VLP. The distribution of spikes can be observed on the surface of both VLPs. Scale bar: 100 nm.

圖2A至圖2C展示VLP在C57BL/6小鼠中之免疫反應。圖1A展示小鼠模型中之疫苗接種方案,包括免疫策略。圖1B展示D614G-S VLP用作抗原且在西方墨點法中利用來自經不同VLP疫苗配方免疫之小鼠的混合抗血清進行偵測。N,不還原及不煮沸;NB,不還原及煮沸;RB,還原及煮沸。圖1C展示在經初打-加打疫苗後第14天收集的脾臟細胞,且隨後在無或有含0.75 μg S之D614G-S VLP的情況下刺激24小時。由每5 × 10 5個脾臟細胞中能分泌IFN-γ或IL-4的細胞形成的斑點數目表示。柱,幾何平均值;條,95%信賴區間(CI)。 Figures 2A to 2C show the immune response of VLPs in C57BL/6 mice. Figure 1A shows the vaccination protocol in the mouse model, including the immunization strategy. Figure 1B shows that D614G-S VLP was used as an antigen and detected in Western blotting using pooled antisera from mice immunized with different VLP vaccine formulations. N, non-reducing and non-boiling; NB, non-reducing and boiling; RB, reducing and boiling. Figure 1C shows spleen cells collected on day 14 after prime-boost vaccination and subsequently stimulated for 24 hours without or with D614G-S VLP containing 0.75 μg S. Expressed by the number of spots formed by cells capable of secreting IFN-γ or IL-4 per 5 × 10 5 spleen cells. Bars, geometric mean; bars, 95% confidence interval (CI).

圖3A至圖3D展示用AddaVax作為佐劑之VLP在倉鼠中的免疫。圖3A展示倉鼠模型之疫苗接種方案,包括免疫及病毒攻擊之時間點。圖3B展示在基於CPE之比色活病毒微中和分析中,測定加打追加劑後第2週經免疫倉鼠之抗血清的中和力價。散點圖代表個別資料點且在幾何平均值處疊加一條水平線,具有95% CI。圖3C展示使用攜帶SARS-CoV-2之S蛋白的假病毒測定經免疫之倉鼠抗血清對假病毒的中和力價。帶有個別資料點之時間曲線圖;線,幾何平均值;條,95% CI。圖3D展示D614G-S VLP可在西方墨點法中由經VLP免疫之倉鼠混合抗血清識別。N,不還原及不煮沸;NB,不還原及煮沸。Figures 3A to 3D show immunization of VLPs in hamsters with AddaVax as adjuvant. Figure 3A shows the vaccination schedule of the hamster model, including the time points of immunization and viral challenge. Figure 3B shows the determination of the neutralizing potency of antisera from immunized hamsters at week 2 after the addition of a booster dose in a CPE-based colorimetric live virus microneutralization assay. Scatter plots represent individual data points and are overlaid with a horizontal line at the geometric mean, with 95% CI. Figure 3C shows the use of a pseudovirus carrying the S protein of SARS-CoV-2 to determine the neutralizing potency of immunized hamster antisera against the pseudovirus. Time plot with individual data points; line, geometric mean; bars, 95% CI. Figure 3D shows that D614G-S VLP can be recognized by VLP-immunized hamster pooled antisera in Western blotting. N, non-reducing and non-boiling; NB, non-reducing and non-boiling.

圖4A至圖4F展示VLP疫苗在經免疫倉鼠中之保護功效。圖4A展示在攻毒後經施打過疫苗的倉鼠體重變化的中位數。點,中位數;條,95% CI。圖4B至圖4D展示經PBS (圖4B)、2P-S (圖4C)及D614G-S (圖4D) 施打過疫苗的倉鼠在攻毒後的個體體重變化及中位數。圖4E展示藉由RT-PCR測定打過疫苗的倉鼠在3 dpi (左)及6 dpi (右)之肺及十二指腸中病毒E基因的表現量。圖為幾何平均值,具有95% CI。圖4F展示在3 dpi (左)及6 dpi (右)之肺及十二指腸組織溶解物中SARS-CoV 2之TCID 50經確定且以散點圖表示。點,個別資料;線,幾何平均值;條,95% CI。 Figures 4A to 4F show the protective efficacy of VLP vaccines in immunized hamsters. Figure 4A shows the median body weight change in vaccinated hamsters after challenge. Points, median; bars, 95% CI. Figures 4B to 4D show the individual body weight changes and median values after challenge in hamsters vaccinated with PBS (Figure 4B), 2P-S (Figure 4C) and D614G-S (Figure 4D). Figure 4E shows the expression of the viral E gene in the lungs and duodenum of vaccinated hamsters at 3 dpi (left) and 6 dpi (right) measured by RT-PCR. The graph shows the geometric mean with 95% CI. Figure 4F shows that the TCID 50 of SARS-CoV 2 in lung and duodenal tissue lysates at 3 dpi (left) and 6 dpi (right) was determined and represented as a scatter plot. Points, individual data; line, geometric mean; bars, 95% CI.

圖5A至圖5G展示SARS-CoV-2感染後經疫苗接種之倉鼠的組織病理學分析。圖5A展示H&E染色之病理分析。比例尺,500 μm。圖5B展示在3 dpi及6 dpi之接受攻毒的倉鼠之肺實質化病變程度的定量,以散點圖表示。點,個別資料;線,幾何平均值;條,95% CI。圖5C展示用SARS-CoV-2-N抗體測定IHC中之病毒含量。比例尺,100 μm。圖5D至圖5G展示接受攻毒之倉鼠免疫反應。藉由使用MX1 (圖5D)、MPO (圖5E)、IBA-1 (圖5F)及CD3 (圖5G)抗體分別對IFN反應、嗜中性球、巨噬細胞及CD3 T細胞進行IHC分析來檢查肺臟病理切片樣本。Figures 5A to 5G show histopathological analysis of vaccinated hamsters after SARS-CoV-2 infection. Figure 5A shows the pathological analysis of H&E staining. Scale bar, 500 μm. Figure 5B shows the quantification of the extent of lung parenchymal lesions in challenged hamsters at 3 dpi and 6 dpi, as a scatter plot. Points, individual data; line, geometric mean; bars, 95% CI. Figure 5C shows the determination of viral content in IHC using SARS-CoV-2-N antibodies. Scale bar, 100 μm. Figures 5D to 5G show the immune response of hamsters challenged with the virus. IHC analysis of IFN responses, neutrophils, macrophages, and CD3 T cells using MX1 (Figure 5D), MPO (Figure 5E), IBA-1 (Figure 5F), and CD3 (Figure 5G) antibodies, respectively. Examine lung pathology slide samples.

圖6A及圖6B展示2P-S VLP (圖6A)及D614G-S VLP (圖6B)可由COVID-19感染康復後之患者的抗血清識別。Figure 6A and Figure 6B show that 2P-S VLP (Figure 6A) and D614G-S VLP (Figure 6B) can be recognized by antisera from patients who recovered from COVID-19 infection.

圖7A及圖7B展示在西方墨點法中使用抗S1 (圖7A)及抗S2 (圖7B)抗體對2P-S及D614G-S VLP中刺突蛋白含量的定量。Figures 7A and 7B show quantification of spike protein content in 2P-S and D614G-S VLPs using anti-S1 (Figure 7A) and anti-S2 (Figure 7B) antibodies in Western blotting.

圖8A及圖8B展示未感染的經疫苗接種之倉鼠的組織病理學分析。圖8A顯示H&E染。圖8B展示接受攻毒之倉鼠免疫反應。使用MX1、MPO、IBA-1及CD3抗體對肺臟病理切片樣本進行IHC分析,以分別檢驗IFN反應、嗜中性球、巨噬細胞及CD3 T細胞。Figures 8A and 8B show histopathological analysis of uninfected vaccinated hamsters. Figure 8A shows H&E staining. Figure 8B shows the immune response of hamsters challenged with the virus. IHC analysis of lung pathological section samples was performed using MX1, MPO, IBA-1 and CD3 antibodies to detect IFN response, neutrophils, macrophages and CD3 T cells respectively.

圖9A至圖9C展示衍生自SARS-CoV-2之Delta變異體之VLP的生產。感染性越來越強的SARS-CoV-2新變異病毒株一再的演化出現顯示,隨著刺突突變之累積,適應性增強的突變隨之而來。因此,吾等製作一系列VLP生產細胞株,沿著最新的高關注變異株(VOC)進行追逐。使用吾等在293F細胞株中之VLP生產系統,吾等根據SARS-CoV-2 Delta及Omicron VOC之刺突蛋白序列重組設計改造兩個系列之VLP。吾等已產生穩定表現之生產細胞株,該等細胞株共表現攜帶所標示之不同突變之S蛋白,包括原型(or-) Delta、GSAS-2P及GSAS突變體以及M及E蛋白,從而產生三種不同的Delta-VLP。藉由使用抗S1 (目錄號40592-T62, Sino Biological, Beijing, China)及抗S2抗體(目錄號40590-D001,Sino Biological)之免疫墨點法對VLP中之S蛋白進行定性分析,且藉由冷凍電子顯微斷層掃描技術(ECT或cryoET)觀察到VLP之球形形態,表面呈現各自對應的不同刺突。Figures 9A-9C show the production of VLPs derived from Delta variants of SARS-CoV-2. The repeated evolution of new mutant strains of SARS-CoV-2 that are becoming more and more infectious shows that as spike mutations accumulate, mutations that enhance adaptability follow. Therefore, we created a series of VLP production cell lines and followed the latest variants of high concern (VOC). Using our VLP production system in the 293F cell line, we recombinantly designed and transformed two series of VLPs based on the spike protein sequences of SARS-CoV-2 Delta and Omicron VOC. We have generated stably expressed production cell lines that co-express the S protein carrying the different mutations indicated, including prototype (or-) Delta, GSAS-2P and GSAS mutants, as well as M and E proteins, thereby producing Three different Delta-VLPs. The S protein in VLPs was qualitatively analyzed by immunoblotting using anti-S1 (Cat. No. 40592-T62, Sino Biological, Beijing, China) and anti-S2 antibodies (Cat. No. 40590-D001, Sino Biological). The spherical morphology of VLPs was observed by cryo-electron microtomography (ECT or cryoET), with corresponding different spikes on the surface.

圖10A至圖10D展示衍生自SARS-CoV-2之Omicron變異株之VLP的生產。類似地,吾等藉由共表現攜帶如圖上標示之不同突變Omicron S以及M及E蛋白來生產Omicron VLP。Omicron VLP中之S蛋白係藉由使用抗S1 (目錄號40592-MM117,Sino Biological)及抗S2抗體(目錄號40590-D001,Sino Biological)之免疫墨點法進行定性分析。ETC顯示Omicron VLP之球形形態呈現各別的不同刺突。對於原始、2P-S、RQSR-2P-S及GSAS-2P-S突變體,衍生自S、M及E蛋白之Omicron VLP的平均直徑分別為114.8 ± 0.8 nm、109.3 ± 0.4 nm、110.7 ± 0.7 nm及96.4 ± 0.4 nm。Figures 10A to 10D show the production of VLPs derived from Omicron variants of SARS-CoV-2. Similarly, we produced Omicron VLPs by co-expressing Omicron S and M and E proteins carrying the different mutations indicated above. The S protein in Omicron VLP was qualitatively analyzed by immunoblotting using anti-S1 (Cat. No. 40592-MM117, Sino Biological) and anti-S2 antibodies (Cat. No. 40590-D001, Sino Biological). ETC shows that the spherical morphology of Omicron VLP exhibits different spikes. The average diameters of Omicron VLPs derived from S, M, and E proteins were 114.8 ± 0.8 nm, 109.3 ± 0.4 nm, and 110.7 ± 0.7 for the original, 2P-S, RQSR-2P-S, and GSAS-2P-S mutants, respectively. nm and 96.4 ± 0.4 nm.

圖10E至圖10H展示,S蛋白之過度表現足以驅動VLP自動物細胞中釋放。吾等對293F細胞株中過度表現原始株S、M及E蛋白所衍生之VLP的蛋白質體分析發現,VLP中併入的M及E蛋白含量幾乎偵測不到。因此,吾等研究僅過度表現S蛋白是否可驅動VLP自轉殖基因的細胞中出芽釋放到細胞外。重要的是,僅在293F細胞株中過度表現S蛋白就能生產VLP且釋放在培養基中,包括原始株S (野生型)及其GSAS-2P-S突變體、Omicron S (原型)及Omicron 2P-S及RQSR-S突變體(圖10E至圖10G)。純化後,對於原型、2P-S及RQSR-2P-S突變體,僅用Omicron S蛋白所產生之Omicron VLP的平均直徑分別為105.5 ± 0.4 nm、114.1 ± 1.0 nm及124.4 ± 0.5 nm (圖10E至圖10G)。此為前所未有的證據,僅僅表現冠狀病毒之S蛋白就足以驅動細胞內類冠狀病毒顆粒之出芽(用箭頭標記),且在細胞外空間及細胞培養基中有效地釋放VLP (圖10H)。Figures 10E to 10H demonstrate that overexpression of S protein is sufficient to drive VLP release from animal cells. We analyzed the proteome of VLPs derived from the 293F cell line that overexpressed the S, M, and E proteins of the original strain and found that the amounts of M and E proteins incorporated into the VLPs were almost undetectable. Therefore, we investigated whether overexpression of S protein alone could drive budding of VLPs out of transgenic cells. Importantly, VLPs can be produced and released in the culture medium only by overexpressing the S protein in 293F cell lines, including the original strain S (wild type) and its GSAS-2P-S mutant, Omicron S (prototype) and Omicron 2P -S and RQSR-S mutants (Figure 10E to Figure 10G). After purification, the average diameters of Omicron VLPs produced using only Omicron S protein were 105.5 ± 0.4 nm, 114.1 ± 1.0 nm, and 124.4 ± 0.5 nm for the prototype, 2P-S, and RQSR-2P-S mutants, respectively (Figure 10E to Figure 10G). This is unprecedented evidence that expression of the coronavirus S protein alone is sufficient to drive the budding of intracellular coronavirus-like particles (marked by arrows) and efficiently release VLPs in the extracellular space and cell culture medium (Figure 10H).

圖10I展示,儘管免疫原性較差,但Omicron BA.1變異株之VLP疫苗可激發出中和抗體。已藉由在小鼠模型中進行相同疫苗的初打-加打(2次注射) 來進行免疫,評估候選疫苗的功效。與衍生自原始株S蛋白序列之2P-S VLP相比,衍生自Delta及Omicron VOC之S蛋白及其突變體之VLP與MF59佐劑(1:1,V/V,由RuenHuei Biopharmaceuticals Inc.提供)的調配物表現出很低的免疫原性。因此,吾等將Omicron VLP之劑量提高至五倍(含有3.75 μg S蛋白/小鼠),且在關於新疫苗或追加疫苗之動物實驗中合併原始株的2P-S VLP (含有0.75 μg S蛋白/小鼠)成為二價疫苗之調配物進行比較。雌性K18-hACE2 [B6.Cg-Tg(K18-ACE2)2Prlmn/J]小鼠(n = 7或8,8週齡)用單價Omicron S VLP (原型BA.1或其RQSR-2P突變體),及其與原始株的2P-S VLP (1:5 W/W)混合AS03佐劑(1:1,V/V,由潤惠生技RuenHuei Biopharmaceuticals Inc.產製提供)之組合作為各自的二價疫苗在第0天及第21天進行皮下注射,在第35天抽血。在ELISA中,針對所有含有Omicron VLP之疫苗之混合抗血清的特異性IgG力價達到GMT:2 × 10 5。由O-RQSR-2P-S及兩種二價疫苗之50%假病毒中和力價(PVNT 50)顯示之免疫血清針對Omicron BA.1假型慢病毒之中和效力顯著高於O-or-S (Omicron原型刺突)。用二價疫苗(2P-S加Omicron O-or-S或O-RQSR-2P-S)免疫之小鼠針對BA.5之PVNT 50值(中和力價)顯著高於基於BA.1之單價組,意味著Omicron VLP產生之中和抗體反應對同一Omicron亞變異體具有相當高的特異性,與原始株2P-S VLP疫苗不同。吾等數據顯示,Omicron VLP之免疫原性減弱,故需要增加抗原劑量(含有3.75 μgS蛋白/小鼠)且需要搭配使用更強效的佐劑(諸如AS03或其他)以加強及延長由靶向Omicron及未來VOC之VLP疫苗所激發的細胞及體液免疫反應。實驗數據顯示,呈現具有RQSR-2P突變之Omicron S的VLP可有效地構成匹配該病毒株之疫苗。 Figure 10I shows that despite poor immunogenicity, the VLP vaccine of the Omicron BA.1 variant can elicit neutralizing antibodies. The efficacy of vaccine candidates has been evaluated by immunizing with prime-plus doses (2 injections) of the same vaccine in a mouse model. Compared with 2P-S VLP derived from the original strain S protein sequence, VLP derived from Delta and Omicron VOC S protein and its mutants with MF59 adjuvant (1:1, V/V, provided by RuenHuei Biopharmaceuticals Inc. ) formulations exhibit very low immunogenicity. Therefore, we increased the dose of Omicron VLP to five times (containing 3.75 μg S protein/mouse) and incorporated the original strain of 2P-S VLP (containing 0.75 μg S protein) in animal experiments on new or additional vaccines. /mouse) into a bivalent vaccine formulation for comparison. Female K18-hACE2 [B6.Cg-Tg(K18-ACE2)2Prlmn/J] mice (n = 7 or 8, 8 weeks old) were treated with monovalent Omicron S VLP (prototype BA.1 or its RQSR-2P mutant) , and their combination with 2P-S VLP (1:5 W/W) of the original strain mixed with AS03 adjuvant (1:1, V/V, manufactured by RuenHuei Biopharmaceuticals Inc.) as their respective The bivalent vaccine was injected subcutaneously on days 0 and 21, and blood was drawn on day 35. In ELISA, the specific IgG potency of the pooled antisera against all vaccines containing Omicron VLP reached GMT: 2 × 10 5 . The neutralizing potency of immune serum against Omicron BA.1 pseudotyped lentivirus, as shown by the 50% pseudovirus neutralizing potency (PVNT 50 ) of O-RQSR-2P-S and the two bivalent vaccines, was significantly higher than that of O-or -S (Omicron prototype spike). The PVNT 50 values (neutralizing potency) of mice immunized with the bivalent vaccine (2P-S plus Omicron O-or-S or O-RQSR-2P-S) against BA.5 were significantly higher than those based on BA.1 The monovalent group means that the neutralizing antibody response generated by Omicron VLP is quite specific to the same Omicron subvariant, unlike the original strain 2P-S VLP vaccine. Our data show that the immunogenicity of Omicron VLP is weakened, so the antigen dose needs to be increased (containing 3.75 μg S protein/mouse) and more powerful adjuvants (such as AS03 or others) need to be used to enhance and prolong the response by the target. Cellular and humoral immune responses stimulated by Omicron and future VOC VLP vaccines. Experimental data show that VLPs expressing Omicron S with RQSR-2P mutations can effectively constitute a vaccine matching this virus strain.

圖11A至圖11H展示生產H5N2-VLP之穩定293F細胞株的建立及H5N2-VLP之表徵。圖11A在步驟I中展示,人類293F細胞株經GFP報導質體穩定轉染以捕獲基因體中高度表現的基因位點。經分離單株細胞後且針對具有單套報導子之單株細胞作為創始細胞株進行定性分析。在步驟II中,創始細胞株隨後用FLPe及供體質體共轉染,以將GFP與H5N2-VLP基因簇交換。圖11B展示在多西環素誘導後,基因交換細胞基於GFP缺少而富集。圖11C展示,單株細胞經分離且針對其VLP基因之誘導型表現進行定性分析。圖11D展示,VLP的生產細胞在懸浮培養中按比例擴大且藉由在培養基中添加1 µg/mL多西環素來誘導。自條件培養基中收穫H5N2-VLP且藉由蔗糖密度梯度超速離心進行純化。分析經純化之H5N2-VLP (批次1及批次2)之血球凝集活性。圖11E展示,純化過之H5N2-VLP用2%醋酸鈾進行負染色,且藉由穿透式電子顯微鏡(TEM)在100,000×放大率下觀察。圖11F展示,經純化之H5N2-VLP的粒徑及分佈藉由動態光散射(DLS)進行測定分析。圖11G展示,藉由NA-star流感神經胺糖酸酶抑制劑抗性偵測套組(Thermo Fisher)量測NA活性。每μg H5N2-VLP提供150,000 RLU/秒之NA活性。圖11H展示使用抗H5抗體藉由西方墨點法分析經純化之H5N2-VLP的HA蛋白。Figures 11A to 11H show the establishment of a stable 293F cell line producing H5N2-VLP and the characterization of H5N2-VLP. Figure 11A shows in step I that the human 293F cell line was stably transfected with a GFP reporter plasmid to capture highly expressed gene loci in the gene body. After a single cell line is isolated, a single cell line with a single set of reporters is used as the founder cell line for qualitative analysis. In step II, the founder cell line is then co-transfected with FLPe and donor plastids to exchange GFP with the H5N2-VLP gene cluster. Figure 11B shows that after doxycycline induction, gene-swap cells are enriched based on GFP deficiency. Figure 11C shows that individual cells were isolated and qualitatively analyzed for the inducible expression of their VLP genes. Figure 11D shows that VLP-producing cells were scaled up in suspension culture and induced by adding 1 µg/mL doxycycline to the culture medium. H5N2-VLPs were harvested from conditioned medium and purified by sucrose density gradient ultracentrifugation. The purified H5N2-VLPs (Batch 1 and Batch 2) were analyzed for hemagglutination activity. Figure 11E shows that purified H5N2-VLP was negatively stained with 2% uranyl acetate and observed by transmission electron microscopy (TEM) at 100,000× magnification. Figure 11F shows that the particle size and distribution of purified H5N2-VLP were determined and analyzed by dynamic light scattering (DLS). Figure 11G shows measurement of NA activity by NA-star influenza neuraminidase inhibitor resistance detection kit (Thermo Fisher). Provides 150,000 RLU/sec NA activity per μg of H5N2-VLP. Figure 11H shows analysis of the HA protein of purified H5N2-VLPs by Western blotting using anti-H5 antibodies.

圖12A至圖12E展示生產H5N2-VLP之穩定昆蟲High-Five細胞株的建立及H5N2-VLP之定性分析。圖12A展示,昆蟲High-5細胞株經GFP報導質體穩定轉染以捕獲其基因體中的高度表現基因位點。創始細胞株隨後用昆蟲啟動子驅動之FLPe及供體質體共轉染,以將GFP與H5N2-VLP基因簇交換。在多西環素誘導後,完成基因交換的細胞藉由失去GFP來進行富集。圖12B展示,單株細胞經分離且針對具有單套報導子之單株細胞作為創始細胞株進行定性分析。代表性創始細胞株之GFP影像。圖12C展示,單株細胞經分離且藉由qRT-PCR對其VLP基因之誘導型表現進行定性分析。圖12D展示在懸浮培養中按比例擴大且藉由在培養基中添加1 µg/mL多西環素進行誘導後,藉由NA-Star流感神經胺糖酸酶抑制劑抗性偵測套組(Thermo Fisher)量測VLP生產細胞之神經胺糖酸酶活性。圖12E展示,經純化之H5N2-VLP由2%乙酸氧鈾陰性染色,且藉由透射電子顯微鏡(TEM)在200,000×放大率下觀察。Figures 12A to 12E show the establishment of a stable insect High-Five cell line for producing H5N2-VLP and the qualitative analysis of H5N2-VLP. Figure 12A shows that the insect High-5 cell line was stably transfected with a GFP reporter plasmid to capture highly expressed gene loci in its gene body. The founder cell line was subsequently co-transfected with insect promoter-driven FLPe and donor plastid to exchange GFP with the H5N2-VLP gene cluster. After doxycycline induction, cells that completed gene exchange were enriched by loss of GFP. Figure 12B shows that a single cell line was isolated and qualitatively analyzed against a single cell line with a single set of reporters as the founder cell line. GFP images of representative founder cell lines. Figure 12C shows that a single cell line was isolated and the inducible expression of its VLP gene was qualitatively analyzed by qRT-PCR. Figure 12D shows the NA-Star Influenza Neuraminidase Inhibitor Resistance Detection Kit (Thermo Fisher) measured the neuraminidase activity of VLP-producing cells. Figure 12E shows that purified H5N2-VLP was negatively stained by 2% uranyl acetate and observed by transmission electron microscopy (TEM) at 200,000× magnification.

圖13展示哺乳動物細胞系統之目標卡匣。Figure 13 shows the targeting cassette for mammalian cell systems.

圖14展示昆蟲細胞系統之目標卡匣。Figure 14 shows the target cassette for the insect cell system.

圖15展示pGEMT-RMCE1-CMVto-sfGFP之圖譜。Figure 15 shows the map of pGEMT-RMCE1-CMVto-sfGFP.

圖16展示pUC57.Insect RMCR1之圖譜。Figure 16 shows the map of pUC57.Insect RMCR1.

TW202334433A_111134790_SEQL.xmlTW202334433A_111134790_SEQL.xml

Claims (29)

一種穩定表現類病毒顆粒(VLP)之動物細胞,其包含用於定點重組一或多個VLP基因之誘導型表現卡匣。An animal cell stably expressing virus-like particles (VLP) contains an inducible expression cassette for site-directed recombination of one or more VLP genes. 如請求項1之動物細胞,其中該動物細胞為昆蟲細胞或哺乳動物細胞。The animal cell of claim 1, wherein the animal cell is an insect cell or a mammalian cell. 如請求項1之動物細胞,其中該哺乳動物細胞為人類細胞。The animal cell of claim 1, wherein the mammalian cell is a human cell. 如請求項1之動物細胞,其中該類病毒顆粒包含冠狀病毒結構蛋白或流感病毒結構蛋白。Such as the animal cell of claim 1, wherein the virus particle contains a coronavirus structural protein or an influenza virus structural protein. 如請求項4之動物細胞,其中該冠狀病毒結構蛋白為SARS-CoV-2 (COVID-19)之結構蛋白。Such as the animal cell of claim 4, wherein the coronavirus structural protein is the structural protein of SARS-CoV-2 (COVID-19). 如請求項5之動物細胞,其中該SARS-CoV-2為SARS-CoV-2之Delta及Omicron變異體。For example, the animal cell of claim 5, wherein the SARS-CoV-2 is a Delta and Omicron variant of SARS-CoV-2. 如請求項4之動物細胞,其中該冠狀病毒結構蛋白包含刺突蛋白(S)、膜蛋白(M)及包膜蛋白(E)。Such as the animal cell of claim 4, wherein the coronavirus structural protein includes spike protein (S), membrane protein (M) and envelope protein (E). 如請求項7之動物細胞,其中該刺突蛋白為原生D614G刺突蛋白(SEQ ID NO: 6)、二脯胺酸突變刺突蛋白(2P-S) (SEQ ID NO: 8)、D614G-S突變刺突蛋白、Delta-or刺突蛋白(SEQ ID NO: 10)、Delta-GSAS 2P突變刺突蛋白(SEQ ID NO: 12)、Omicron-or刺突蛋白(SEQ ID NO: 14)或Omicron-GSAS 2P刺突蛋白(SEQ ID NO: 16)。Such as the animal cell of claim 7, wherein the spike protein is native D614G spike protein (SEQ ID NO: 6), diproline mutant spike protein (2P-S) (SEQ ID NO: 8), D614G- S mutant spike protein, Delta-or spike protein (SEQ ID NO: 10), Delta-GSAS 2P mutant spike protein (SEQ ID NO: 12), Omicron-or spike protein (SEQ ID NO: 14) or Omicron-GSAS 2P spike protein (SEQ ID NO: 16). 如請求項8之動物細胞,其中該刺突蛋白係由選自SEQ ID NO: 7、9、11、13、15及17組成之群的DNA序列編碼。Such as the animal cell of claim 8, wherein the spike protein is encoded by a DNA sequence selected from the group consisting of SEQ ID NO: 7, 9, 11, 13, 15 and 17. 如請求項4之動物細胞,其中該流感病毒結構蛋白為H5N2或H3N2流感病毒之結構蛋白。Such as the animal cell of claim 4, wherein the influenza virus structural protein is the structural protein of H5N2 or H3N2 influenza virus. 如請求項4之動物細胞,其中該流感病毒結構蛋白包含血球凝集素(HA)、神經胺糖酸酶(NA)及基質蛋白(M1及M2)。Such as the animal cell of claim 4, wherein the influenza virus structural protein includes hemagglutinin (HA), neuraminidase (NA) and matrix proteins (M1 and M2). 如請求項4之動物細胞,其中該流感病毒結構蛋白係選自由以下組成之群:H5蛋白(SEQ ID NO: 18)、N2蛋白(SEQ ID NO: 20)、M1蛋白(SEQ ID NO: 22)及M2蛋白(SEQ ID NO: 24)。Such as the animal cell of claim 4, wherein the influenza virus structural protein is selected from the group consisting of: H5 protein (SEQ ID NO: 18), N2 protein (SEQ ID NO: 20), M1 protein (SEQ ID NO: 22 ) and M2 protein (SEQ ID NO: 24). 如請求項12之動物細胞,其中該流感病毒結構蛋白係由選自SEQ ID NO: 19、21、23及25組成之群的DNA序列編碼。Such as the animal cell of claim 12, wherein the influenza virus structural protein is encoded by a DNA sequence selected from the group consisting of SEQ ID NO: 19, 21, 23 and 25. 如請求項1之動物細胞,其係藉由穩定轉染包含Flp/FRT重組系統之誘導型四環素誘導型啟動子-報導子或多西環素誘導型啟動子-報導子的目標卡匣及穩定表現之四環素抑制子卡匣;及經由與FLPe重組酶共轉染將該目標卡匣及四環素抑制子卡匣進行基因交換以實現所有VLP基因之定點插入來建立。Such as the animal cells of claim 1, which are stably transfected with a target cassette containing an inducible tetracycline-inducible promoter-reporter or a doxycycline-inducible promoter-reporter of the Flp/FRT recombination system and stabilized The expressed tetracycline repressor cassette; and the target cassette and the tetracycline repressor cassette are genetically exchanged through co-transfection with FLPe recombinase to achieve site-specific insertion of all VLP genes. 如請求項1之動物細胞,其中該誘導型表現卡匣包含四環素誘導型啟動子或多西環素誘導型啟動子。The animal cell of claim 1, wherein the inducible expression cassette includes a tetracycline-inducible promoter or a doxycycline-inducible promoter. 如請求項1之動物細胞,其穩定表現四環素抑制子卡匣。For example, the animal cells of claim 1 stably express the tetracycline inhibitor cassette. 如請求項16之動物細胞,其中該四環素抑制子卡匣包含四環素抑制子基因及由來源於豬鐵士古病毒1之自裂解2A肽連接之保米黴素S抗性基因。The animal cell of claim 16, wherein the tetracycline suppressor cassette includes a tetracycline suppressor gene and a paimimycin S resistance gene linked by a self-cleaving 2A peptide derived from porcine Tiesca virus 1. 如請求項1之動物細胞,其中該誘導型表現卡匣包含CMV/TO、黃杉毒蛾( Orgyia pseudotsugata)核多角體病毒(OpMNPV)立即早期2 (IE2)及姬透目天蠶蛾( Antheraea pernyl) 肌動蛋白 A1啟動子。 Such as the animal cell of claim 1, wherein the inducible expression cassette includes CMV/TO, Orgyia pseudotsugata nuclear polyhedrosis virus (OpMNPV) immediate early 2 (IE2) and Antheraea pernyl Actin A1 promoter. 如請求項16之動物細胞,其中該穩定表現卡匣為EF1a/eIF4g-pCI-TetR-P2A-BSD卡匣。Such as the animal cell of claim 16, wherein the stable expression cassette is an EF1a/eIF4g-pCI-TetR-P2A-BSD cassette. 一種用於製造類病毒顆粒之方法,其包含培養如請求項1至19中任一項之動物細胞及收穫該類病毒顆粒。A method for producing virus-like particles, comprising culturing the animal cells of any one of claims 1 to 19 and harvesting the virus-like particles. 一種類病毒顆粒,其係藉由如請求項20之方法製造。A virus-like particle produced by the method of claim 20. 一種疫苗組合物,其包含免疫有效量之如請求項21之類病毒顆粒。A vaccine composition comprising an immunologically effective amount of viral particles as claimed in claim 21. 如請求項22之疫苗組合物,其進一步包含佐劑。The vaccine composition of claim 22, further comprising an adjuvant. 一種如請求項22之疫苗組合物的用途,其用於製造供預防個體之病毒感染用的藥物。A use of the vaccine composition of claim 22 for the manufacture of medicaments for preventing viral infection in individuals. 如請求項24之用途,其中該病毒感染為冠狀病毒感染或流感病毒感染。Such as requesting the use of item 24, wherein the viral infection is coronavirus infection or influenza virus infection. 如請求項24之用途,其中該病毒感染為SARS-CoV-2感染或H5N2或H3N2流感病毒感染。Such as the use of request item 24, wherein the viral infection is SARS-CoV-2 infection or H5N2 or H3N2 influenza virus infection. 如請求項24之用途,其中該藥物係用於預防病毒複製或緩解由該病毒感染引起的症狀。Such as the use of claim 24, wherein the drug is used to prevent virus replication or relieve symptoms caused by the virus infection. 一種如請求項22之疫苗組合物的用途,其用於製造供個體產生對該等VLP具有特異性之抗體用的藥物。A use of the vaccine composition of claim 22 for the manufacture of medicaments for individuals to produce antibodies specific to the VLPs. 如請求項28之用途,其中對該等VLP具有特異性之該等抗體進一步自該個體收穫。The use of claim 28, wherein the antibodies specific for the VLPs are further harvested from the individual.
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