TW202321315A - Polypeptide complex of interleukin 15 and interleukin 15 receptor - Google Patents
Polypeptide complex of interleukin 15 and interleukin 15 receptor Download PDFInfo
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- TW202321315A TW202321315A TW111136248A TW111136248A TW202321315A TW 202321315 A TW202321315 A TW 202321315A TW 111136248 A TW111136248 A TW 111136248A TW 111136248 A TW111136248 A TW 111136248A TW 202321315 A TW202321315 A TW 202321315A
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Abstract
Description
本申請主張申請日為2021年9月24日的中國專利申請(申請號:202111123534.X,發明名稱:一種白介素15及其受體的多肽複合物)以及申請日為2021年9月24日的中國專利申請(申請號:202111121937.0,發明名稱:雙特異性多功能融合多肽)的優先權,這2件中國專利申請的全文通過引用方式整體併入到本申請。This application claims the Chinese patent application with the filing date of September 24, 2021 (Application No.: 202111123534.X, invention name: a polypeptide complex of
本發明涉及生物醫藥領域,具體而言,涉及一種包含白細胞介素15及其受體的二硫鍵改造多肽複合物。The present invention relates to the field of biomedicine, and specifically to a disulfide bond-modified polypeptide
細胞因子在人體免疫調節中起重要作用,同時也參與腫瘤的免疫調控,與腫瘤的發生、發展密切相關。在免疫療法中,細胞因子可直接作用於腫瘤微環境中的免疫效應細胞,增強腫瘤抑制效果。通過臨床研究以及動物實驗,許多細胞因子已被證明具有顯著的抗腫瘤活性,已有多個細胞因子獲得FDA批准上市。Cytokines play an important role in human immune regulation. They also participate in the immune regulation of tumors and are closely related to the occurrence and development of tumors. In immunotherapy, cytokines can directly act on immune effector cells in the tumor microenvironment to enhance the tumor suppressive effect. Through clinical studies and animal experiments, many cytokines have been proven to have significant anti-tumor activity, and several cytokines have been approved by the FDA.
白細胞介素15(IL-15)是Grabstein等人於1994年發現的一種約為12-14kD的細胞因子,可在機體正常的免疫應答中發揮作用,如促進T細胞、B細胞、自然殺傷(NK)細胞的增殖。Interleukin 15 (IL-15) is a cytokine of approximately 12-14kD discovered by Grabstein et al. in 1994. It can play a role in the body's normal immune response, such as promoting T cells, B cells, and natural killer ( NK) cell proliferation.
IL-15屬於四個小α螺旋束細胞因子家族(Small four α-helix bundle family of cytokines)中的成員。 IL-15需通過與其受體結合發揮生物學活性。 IL-15受體由三個受體亞基組成:IL-15受體α(IL-15Rα)、IL-2受體β(IL-2Rβ,也稱IL-15Rβ或CD122)和γc(也稱CD132)。 IL-15Rα內含一個Sushi結構域,能與IL-15結合,並且是使結合後的IL-15發揮生物學功能所必需的。IL-15 is a member of the Small four α-helix bundle family of cytokines. IL-15 needs to bind to its receptor to exert biological activity. The IL-15 receptor is composed of three receptor subunits: IL-15 receptor alpha (IL-15Rα), IL-2 receptor beta (IL-2Rβ, also known as IL-15Rβ or CD122), and γc (also known as CD132). IL-15Rα contains a Sushi domain that can bind to IL-15 and is necessary for the combined IL-15 to exert its biological functions.
近年來,IL15及IL15受體更多地用於構建融合蛋白,為了提高融合蛋白的穩定性,本申請在白介素15及其受體之間引入二硫鍵。In recent years, IL15 and IL15 receptor have been increasingly used to construct fusion proteins. In order to improve the stability of the fusion protein, this application introduces a disulfide bond between
本發明提供一種IL15/IL15Rα多肽複合物,所述IL15和IL15Rα之間具有一個非天然的鏈間鍵,所述非天然鏈間鍵形成於IL15的第一突變殘基和IL15Rα的第二突變殘基之間,所述IL15第一突變殘基為第90位的E突變為C,IL15Rα第二突變殘基為第67位的P突變為C。所述IL15的氨基酸殘基突變位點為參照SEQ ID NO:26對應的自然順序編號位點,所述IL15Rα的氨基酸殘基突變位點為參照SEQ ID NO:27對應的自然順序編號位點。在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述IL15和IL15Rα特異性結合;在一些實施方式中,其中,The invention provides an IL15/IL15Rα polypeptide complex. There is an unnatural interchain bond between IL15 and IL15Rα. The unnatural interchain bond is formed from the first mutated residue of IL15 and the second mutated residue of IL15Rα. Between the bases, the first mutated residue of IL15 is the E at position 90 that is mutated to C, and the second mutated residue of IL15Rα is the P at position 67 that is mutated to C. The amino acid residue mutation site of IL15 is the natural sequence numbering site corresponding to SEQ ID NO: 26, and the amino acid residue mutation site of IL15Rα is the natural sequence numbering site corresponding to SEQ ID NO: 27. In some embodiments, the IL15/IL15Rα polypeptide complex described in any of the preceding items, the IL15 and IL15Rα specifically bind; in some embodiments, wherein,
A)所述IL15第61位的D突變為N,第64位的E突變為Q,和/或第65位的N突變位D;和/或A) The D at position 61 of IL15 is mutated to N, the E at position 64 is mutated to Q, and/or the N at position 65 is mutated to D; and/or
B)所述IL15至少一個N糖基化位點不存在;在一些實施方式中,所述N糖基化位點選自N71、N79和/或N112; 在一些實施方式中,所述IL15包含以下氨基酸突變:N71Q、N79Q和/或N112Q;和/或所述IL15Rα至少一個O糖基化位點不存在;在一些實施方式中,所述O糖基化位點選自T2、T81和/或T86; 在一些實施方式中,所述IL15Rα包含以下氨基酸突變:T2A、T81A和/或T86A;B) at least one N-glycosylation site of IL15 is absent; in some embodiments, the N-glycosylation site is selected from N71, N79 and/or N112; in some embodiments, the IL15 comprises The following amino acid mutations: N71Q, N79Q and/or N112Q; and/or at least one O-glycosylation site of IL15Rα is absent; in some embodiments, the O-glycosylation site is selected from T2, T81 and/or or T86; In some embodiments, the IL15Rα comprises the following amino acid mutations: T2A, T81A and/or T86A;
所述IL15的氨基酸殘基突變位點為參照SEQ ID NO:26對應的自然順序編號位點,所述IL15Rα的氨基酸殘基突變位點為參照SEQ ID NO:27對應的自然順序編號位點。The amino acid residue mutation site of IL15 is the natural sequence numbering site corresponding to SEQ ID NO: 26, and the amino acid residue mutation site of IL15Rα is the natural sequence numbering site corresponding to SEQ ID NO: 27.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述IL15為SEQ ID NO.84所示的氨基酸序列或其突變序列;在一些實施方式中,所述突變序列包括選自D61N、E64Q和/或N65D氨基酸突變,和/或選自N71Q、N79Q和/或N112Q氨基酸突變;所述IL15的氨基酸殘基突變位點為參照SEQ ID NO:26對應的自然順序編號位點。In some embodiments, the IL15/IL15Rα polypeptide complex described in any one of the preceding items, the IL15 is the amino acid sequence shown in SEQ ID NO. 84 or its mutant sequence; in some embodiments, the mutant sequence includes Selected from D61N, E64Q and/or N65D amino acid mutations, and/or selected from N71Q, N79Q and/or N112Q amino acid mutations; the amino acid residue mutation site of IL15 is the natural sequence numbering position corresponding to SEQ ID NO: 26 point.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述IL15Rα包含SEQ ID NO.28或其突變序列、SEQ ID NO.77或其突變序列、SEQ ID NO.78或其突變序列、SEQ ID NO.79或其突變序列、SEQ ID NO.80或其突變序列、或SEQ ID NO.81或其突變序列;在一些實施方式中,所述突變序列包括選自T2A、T81A和/或T86A的氨基酸突變;在一些實施方式中,所述突變序列包括P67C氨基酸突變;在一些實施方式中,所述突變序列包括P67C氨基酸突變,還包括選自T2A、T81A和/或T86A的氨基酸突變;所述IL15Rα的氨基酸殘基突變位點為參照SEQ ID NO:27對應的自然順序編號位點。In some embodiments, the IL15/IL15Rα polypeptide complex according to any one of the preceding items, the IL15Rα comprises SEQ ID NO.28 or its mutant sequence, SEQ ID NO.77 or its mutant sequence, SEQ ID NO.78 or Its mutant sequence, SEQ ID NO.79 or its mutant sequence, SEQ ID NO.80 or its mutant sequence, or SEQ ID NO.81 or its mutant sequence; in some embodiments, the mutant sequence includes selected from T2A, Amino acid mutations of T81A and/or T86A; in some embodiments, the mutation sequence includes a P67C amino acid mutation; in some embodiments, the mutation sequence includes a P67C amino acid mutation, and also includes an amino acid mutation selected from T2A, T81A, and/or T86A Amino acid mutation; the amino acid residue mutation site of IL15Rα is the natural sequence numbering site corresponding to SEQ ID NO: 27.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述IL15Rα為SEQ ID NO.77或其突變序列、SEQ ID NO.78或其突變序列、SEQ ID NO.79或其突變序列、SEQ ID NO.80或其突變序列、或SEQ ID NO.81或其突變序列;在一些實施方式中,所述突變序列包括P67C氨基酸突變;在一些實施方式中,所述突變序列包括P67C氨基酸突變,還包括選自T2A、T81A和/或T86A的氨基酸突變;在一些實施方式中,所述突變序列包括選自T2A、T81A和/或T86A的氨基酸突變;所述IL15Rα的氨基酸殘基突變位點為參照SEQ ID NO:27對應的自然順序編號位點。In some embodiments, the IL15/IL15Rα polypeptide complex described in any one of the preceding items, the IL15Rα is SEQ ID NO.77 or its mutant sequence, SEQ ID NO.78 or its mutant sequence, SEQ ID NO.79 or Its mutant sequence, SEQ ID NO.80 or its mutant sequence, or SEQ ID NO.81 or its mutant sequence; in some embodiments, the mutant sequence includes P67C amino acid mutation; in some embodiments, the mutant sequence Including P67C amino acid mutation, also includes amino acid mutation selected from T2A, T81A and/or T86A; In some embodiments, the mutation sequence includes amino acid mutation selected from T2A, T81A and/or T86A; The amino acid residue of IL15Rα The base mutation site is the natural sequence numbering site corresponding to SEQ ID NO: 27.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,其還包含抗體Fc恆定區;在一些實施方式中,所述抗體Fc恆定區是異源二聚體;在一些實施方式中,所述抗體Fc恆定區為基於KiH、疏水相互作用、靜電相互作用、親水相互作用和/或增加的柔性而締合成為異源二聚體;在一些實施方式中,所述IL15或IL15Rα的C端與Fc恆定區的N端連接。In some embodiments, the IL15/IL15Rα polypeptide complex as described in any of the preceding items further comprises an antibody Fc constant region; in some embodiments, the antibody Fc constant region is a heterodimer; in some embodiments In one embodiment, the antibody Fc constant region associates as a heterodimer based on KiH, hydrophobic interactions, electrostatic interactions, hydrophilic interactions, and/or increased flexibility; in some embodiments, the IL15 or The C-terminus of IL15Rα is connected to the N-terminus of the Fc constant region.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述多肽複合物為雙特異性融合多肽,所述雙特異性融合多肽包含第一抗原結合部分,其中,In some embodiments, the IL15/IL15Rα polypeptide complex according to any one of the preceding items, the polypeptide complex is a bispecific fusion polypeptide, and the bispecific fusion polypeptide includes a first antigen-binding portion, wherein,
(A)所述第一抗原結合部分包含:第一多肽,所述第一多肽自N末端至C末端包含第一抗體的第一重鏈可變結構域VH1,其可操作性地連接至IL15;和第二多肽,所述第二多肽自N末端至C末端包含第一抗體的第一輕鏈可變結構域VL1,其可操作地連接至IL15Rα;或(A) The first antigen-binding portion comprises: a first polypeptide comprising the first heavy chain variable domain VH1 of the first antibody from the N-terminus to the C-terminus operably linked to to IL15; and a second polypeptide comprising from N-terminus to C-terminus the first light chain variable domain VL1 of the first antibody operably linked to IL15Rα; or
(B)所述第一抗原結合部分包含:第一多肽,所述第一多肽自N末端至C末端包含第一抗體的第一重鏈可變結構域VH1,其可操作性地連接至IL15Rα;和第二多肽,所述第二多肽自N末端至C末端包含第一抗體的第一輕鏈可變結構域VL1,其可操作地連接至IL15。(B) The first antigen-binding portion comprises: a first polypeptide comprising the first heavy chain variable domain VH1 of the first antibody from the N-terminus to the C-terminus operably linked to to IL15Rα; and a second polypeptide comprising the first light chain variable domain VL1 of the first antibody from the N-terminus to the C-terminus operably linked to IL15.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述多肽複合物還包含第二抗原結合部分,其中,所述第二抗原結合部分包括:第三多肽,所述第三多肽自N末端至C末端包含第二抗體的第二重鏈可變結構域VH2,其可操作性地連接至抗體重鏈恆定區CH1,和第四多肽,所述第四多肽自N末端至C末端包含第二抗體的第二輕鏈可變結構域VL2,其可操作地連接至抗體輕鏈恆定區CL。In some embodiments, the IL15/IL15Rα polypeptide complex according to any one of the preceding items, the polypeptide complex further includes a second antigen-binding portion, wherein the second antigen-binding portion includes: a third polypeptide, The third polypeptide comprises from the N-terminus to the C-terminus the second heavy chain variable domain VH2 of the second antibody, which is operably linked to the antibody heavy chain constant region CH1, and a fourth polypeptide, the fourth polypeptide The polypeptide comprises from the N-terminus to the C-terminus the second light chain variable domain VL2 of the second antibody operably linked to the antibody light chain constant region CL.
在一些實施方式中,前面任一項所述的IL15/IL15Rα多肽複合物,所述第一抗原結合部分與所述第二抗原結合部分結合不同的抗原或者結合同一抗原的不同表位;In some embodiments, for the IL15/IL15Rα polypeptide complex described in any one of the preceding items, the first antigen-binding portion and the second antigen-binding portion bind to different antigens or bind to different epitopes of the same antigen;
在一些實施方式中,,所述第一抗原結合部分靶向免疫細胞,所述第二抗原結合部分靶向腫瘤細胞;In some embodiments, the first antigen-binding moiety targets immune cells and the second antigen-binding moiety targets tumor cells;
在一些實施方式中,所述第一抗原結合部分和所述第二抗原結合部分均靶向腫瘤細胞;In some embodiments, the first antigen binding moiety and the second antigen binding moiety both target tumor cells;
在一些實施方式中,所述第一抗原結合部分與所述第二抗原結合部分均靶向免疫細胞;In some embodiments, both the first antigen-binding moiety and the second antigen-binding moiety target immune cells;
在一些實施方式中,所述第一抗原結合部分靶向人PD-L1,第二抗原結合部分靶向人TIGIT;或者所述第一抗原結合部分靶向人TIGIT,第二抗原結合部分靶向人PD-L1。In some embodiments, the first antigen binding portion targets human PD-L1 and the second antigen binding portion targets human TIGIT; or the first antigen binding portion targets human TIGIT and the second antigen binding portion targets Human PD-L1.
本發明還涉及分離的核酸,其編碼前面任一項所述的IL15/IL15Rα多肽複合物。本發明還涉及含有如上所述核酸的載體。The invention also relates to an isolated nucleic acid encoding an IL15/IL15Rα polypeptide complex as described in any one of the preceding items. The invention also relates to vectors containing nucleic acids as described above.
本發明還涉及含有如上所述核酸或者如上所述載體的宿主細胞。The invention also relates to host cells containing nucleic acids as described above or vectors as described above.
本發明還涉及製備所述的IL15/IL15Rα多肽複合物的方法,包括步驟:用如上所述的載體轉化宿主細胞;培養所轉化的宿主細胞;和收集宿主細胞中表達的IL15/IL15Rα多肽複合物。The present invention also relates to a method for preparing the IL15/IL15Rα polypeptide complex, which includes the steps of: transforming host cells with the vector as described above; cultivating the transformed host cells; and collecting the IL15/IL15Rα polypeptide complex expressed in the host cells. .
本發明還涉及藥物組合物,其包含如上所述IL15/IL15Rα多肽複合物和藥學上可接受的載體、賦形劑或穩定劑。The present invention also relates to a pharmaceutical composition comprising the IL15/IL15Rα polypeptide complex as described above and a pharmaceutically acceptable carrier, excipient or stabilizer.
本發明還涉及如上所述IL15/IL15Rα多肽複合物或藥物組合物在製備用於治療疾病的藥物中的應用。The present invention also relates to the use of the IL15/IL15Rα polypeptide complex or pharmaceutical composition as described above in the preparation of drugs for treating diseases.
本發明還涉及用作藥物的前面任一項所述的IL15/IL15Rα多肽複合物或藥物組合物,所述藥物用於治療疾病或病症。The present invention also relates to any of the preceding IL15/IL15Rα polypeptide complexes or pharmaceutical compositions for use as medicaments for the treatment of diseases or conditions.
本發明還涉及一種治療疾病的方法,所述方法包含向有需要的對象施與治療有效量的前面任一項所述的IL15/IL15Rα多肽複合物或藥物組合物。The present invention also relates to a method of treating a disease, the method comprising administering to a subject in need thereof a therapeutically effective amount of the IL15/IL15Rα polypeptide complex or pharmaceutical composition described in any one of the preceding items.
現將詳細地提供本發明實施方式的參考,其一個或多個實例描述於下文。提供每一實例作為解釋而非限製本發明。實際上,對本領域技術人員而言,顯而易見的是,可以對本發明進行多種修改和變化而不背離本發明的範圍或精神。例如,作為一個實施方式的部分而說明或描述的特徵可以用於另一實施方式中,來產生更進一步的實施方式。在本發明中引用的所有文獻,包括公開出版物、專利和專利申請,都通過引用的方式全文併入本文。Reference will now be made in detail to embodiments of the invention, one or more examples of which are described below. Each example is provided by way of explanation, not limitation of the invention. In fact, it will be apparent to those skilled in the art that various modifications and variations can be made in the present invention without departing from the scope or spirit of the invention. For example, features illustrated or described as part of one embodiment can be used in another embodiment, to yield still further embodiments. All documents cited in this disclosure, including publications, patents, and patent applications, are hereby incorporated by reference in their entirety.
除非另有定義,本文所使用的所有的技術和科學術語與屬於本發明的技術領域的技術人員通常理解的含義相同。本文中在本發明的說明書中所使用的術語只是為了描述具體的實施例的目的,不是旨在於限製本發明。本文所使用的術語「和/或」包括一個或多個相關的所列項目的任意的和所有的組合。Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the technical field to which the invention belongs. The terminology used herein in the description of the invention is for the purpose of describing specific embodiments only and is not intended to limit the invention. As used herein, the term "and/or" includes any and all combinations of one or more of the associated listed items.
術語「抗原結合部分」或「抗原結合結構域」意指對抗原決定簇賦予其結合特異性的抗原結合分子的部分。在一些實施方案中,所述「抗原結合部分」為抗體功能片段。The term "antigen-binding portion" or "antigen-binding domain" means that portion of an antigen-binding molecule that confers its binding specificity for an antigenic determinant. In some embodiments, the "antigen binding portion" is a functional fragment of an antibody.
術語「野生型或WT」意指在自然界發現的氨基酸序列或核苷酸序列,包含等位變異。WT蛋白質具有未經過有意修飾的氨基酸序列或核苷酸序列。The term "wild type or WT" means the amino acid sequence or nucleotide sequence found in nature, including allelic variations. WT proteins have an amino acid sequence or nucleotide sequence that has not been intentionally modified.
術語「抗體」涵蓋任意可結合某特定抗原的免疫球蛋白、單克隆抗體、多克隆抗體、多特異性抗體、雙特異性(雙價)抗體或雙特異性融合多肽。一個天然的完整抗體包含兩條重鍊和兩條輕鏈。每條重鏈由一個可變區(「HCVR」或VH)以及第一、第二和第三恒定區(分別為CH1、CH2、CH3)組成,每條輕鏈由一個可變區(「LCVR」或VL)以及一個恆定區(CL)組成。哺乳動物的重鏈可分為α、δ、ε、γ和μ,哺乳動物的輕鏈可分為λ或κ。The term "antibody" covers any immunoglobulin, monoclonal antibody, polyclonal antibody, multispecific antibody, bispecific (bivalent) antibody or bispecific fusion polypeptide that binds a specific antigen. A natural intact antibody contains two heavy chains and two light chains. Each heavy chain consists of a variable region ("HCVR" or VH) and first, second and third constant regions (CH1, CH2, CH3, respectively), and each light chain consists of a variable region ("LCVR" 》 or VL) and a constant region (CL). Mammalian heavy chains can be classified as α, δ, ε, γ, and μ, and mammalian light chains can be classified as λ or κ.
抗體呈「Y」型,主幹由兩條重鏈的第二(CH2)、第三(CH3)以及任選地第四(CH4)恆定區組成,其通過二硫鍵結合。「Y」型結構的每條臂包含其中一條重鏈的可變區(VH)和第一恆定區(CH1),其與一條輕鏈的可變區(VL)和恆定區(CL)結合。輕鍊和重鏈的可變區負責抗原的結合。每條鏈的可變區均含有三個高變區,稱互補決定區(CDR),輕(L)鏈的CDR包含LCDR1、LCDR2、LCDR3,重(H)鏈的CDR包含HCDR1、HCDR2、HCDR3。其中,三個CDR由被稱為框架區(FR)的部分間隔開,框架區比CDR更加高度保守並形成一個支架支撐超變環。HCVR和LCVR各包含4個FR,並且CDR和FR自氨基端至羧基端依以下順序排列:FR1、CDR1、FR2、CDR2、FR3、CDR3、FR4。Antibodies are "Y" shaped, with the backbone consisting of the second (CH2), third (CH3) and optionally fourth (CH4) constant regions of two heavy chains, which are bonded by disulfide bonds. Each arm of the "Y" structure contains the variable domain (VH) and the first constant domain (CH1) of one of the heavy chains, which are combined with the variable domain (VL) and constant domain (CL) of one light chain. The variable regions of the light and heavy chains are responsible for antigen binding. The variable region of each chain contains three hypervariable regions, called complementarity determining regions (CDRs). The CDRs of the light (L) chain include LCDR1, LCDR2, and LCDR3, and the CDRs of the heavy (H) chain include HCDR1, HCDR2, and HCDR3. . Among them, the three CDRs are separated by a portion called the framework region (FR), which is more highly conserved than the CDRs and forms a scaffold supporting the hypervariable loop. HCVR and LCVR each contain 4 FRs, and the CDRs and FRs are arranged in the following order from the amino terminus to the carboxyl terminus: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4.
重鍊和輕鏈的恆定區不參與抗原結合,但具有多種效應功能。抗體依據重鏈恆定區的氨基酸序列可以分成幾類。根據是否含有α、δ、ε、γ和μ重鏈,抗體可分別分為五個主要的分類或異形體:IgA、IgD、IgE、IgG和IgM。幾個主要的抗體分類還可分為亞類,如IgG1(γ1重鏈)、IgG2(γ2重鏈)、IgG3(γ3重鏈)、IgG4(γ4重鏈)、IgA1(α1重鏈)或IgA2(α2重鏈)等。The constant regions of the heavy and light chains are not involved in antigen binding but have a variety of effector functions. Antibodies can be divided into several categories based on the amino acid sequence of the heavy chain constant region. Antibodies can be divided into five main classifications or isoforms according to whether they contain α, δ, ε, γ and μ heavy chains: IgA, IgD, IgE, IgG and IgM. Several major antibody classes can also be divided into subclasses, such as IgG1 (γ1 heavy chain), IgG2 (γ2 heavy chain), IgG3 (γ3 heavy chain), IgG4 (γ4 heavy chain), IgA1 (α1 heavy chain), or IgA2 (α2 heavy chain) etc.
高變區通常包含來自輕鏈可變區中的氨基酸殘基24-34(LCDR1)、50-56(LCDR2)和89-97(LCDR3)以及重鏈可變區中的31-35B(HCDR1)、50-65(HCDR2)和95-102(HCDR3)的氨基酸殘基(Kabat等人,《免疫學相關蛋白質的序列(SEQUENCES OF PROTEINS OF IMMUNOLOGICAL INTEREST)》,第5版.馬里蘭州貝塞斯達美國國家衛生研究院公共衛生服務部(Public Health Service,National Institutes of Health,Bethesda,Md.)(1991)),或那些形成高變環的殘基,例如輕鏈可變區中的殘基26-32(LCDR1)、50-52(LCDR2)和91-96(LCDR3)以及重鏈可變區中的26-32(HCDR1)、53-55(HCDR2)和96-101(HCDR3)(Chothia和Lesk(1987)《分子生物學雜誌(J.Mol.Biol.)》196:901-917)。The hypervariable region typically contains amino acid residues 24-34 (LCDR1), 50-56 (LCDR2) and 89-97 (LCDR3) from the light chain variable region and 31-35B from the heavy chain variable region (HCDR1) , 50-65 (HCDR2) and 95-102 (HCDR3) amino acid residues (Kabat et al., SEQUENCES OF PROTEINS OF IMMUNOLOGICAL INTEREST, 5th ed. Bethesda, MD Public Health Service, National Institutes of Health, Bethesda, Md. (1991)), or those residues that form hypervariable loops, such as residue 26 in the light chain variable region -32 (LCDR1), 50-52 (LCDR2) and 91-96 (LCDR3) and 26-32 (HCDR1), 53-55 (HCDR2) and 96-101 (HCDR3) in the heavy chain variable region (Chothia and Lesk (1987) J. Mol. Biol. 196: 901-917).
在一些實施方式中,所述抗體為雙特異抗體(BiAb)。術語「雙特異性」在本文中是指兩種不同抗原,或者當這兩者是相同抗原時,它們每一個都具有針對不同表位的結合特異性。所述表位可以源自不同抗原或相同抗原。術語「雙特異性融合多肽」和「雙特異性抗體」在本文中是指所有製得的具有全長抗體或帶抗原結合位點的片段的產物。所述抗體可以是人抗體,非人抗體(如小鼠來源抗體),人源化抗體,或嵌合抗體(如人-小鼠嵌合抗體或不同亞型抗體的嵌合)。在一些情況下,抗體的變體是在本發明所提供的抗體序列上發生保守修飾或保守置換或取代所得到的。「保守修飾」或「保守置換或取代」是指具有類似特徵(例如電荷、側鏈大小、疏水性/親水性、主鏈構象和剛性等)的其它氨基酸置換蛋白中的氨基酸,使得可頻繁進行改變而不改變蛋白的生物學活性。本領域技術人員知曉,一般而言,多肽的非必需區域中的單個氨基酸置換基本上不改變生物學活性(參見例如Watson等(1987)Molecular Biology of the Gene, The Benjamin/Cummings Pub. Co., 第224頁,(第4版))。另外,結構或功能類似的氨基酸的置換不大可能破環生物學活性。所屬領域技術人員將能夠使用熟知的技術確定如本文所闡明的抗原結合分子的合適變體。對於核苷酸和氨基酸序列,術語「同一性」表明當具有適當的插入或缺失的情況下最佳比對和比較時兩個核酸或兩個氨基酸序列之間的同一性程度。In some embodiments, the antibody is a bispecific antibody (BiAb). The term "bispecific" as used herein refers to two different antigens, or when the two are the same antigen, each having binding specificities for different epitopes. The epitopes may be derived from different antigens or from the same antigen. The terms "bispecific fusion polypeptide" and "bispecific antibody" are used herein to refer to all products produced that have full-length antibodies or fragments with antigen-binding sites. The antibody may be a human antibody, a non-human antibody (such as a mouse-derived antibody), a humanized antibody, or a chimeric antibody (such as a human-mouse chimeric antibody or a chimeric antibody of different subtypes). In some cases, antibody variants are obtained by conservative modifications or conservative substitutions or substitutions on the antibody sequences provided by the invention. "Conservative modification" or "conservative substitution or substitution" refers to the replacement of amino acids in a protein with other amino acids with similar characteristics (such as charge, side chain size, hydrophobicity/hydrophilicity, backbone conformation and rigidity, etc.), such that it can be performed frequently Change without altering the biological activity of the protein. Those skilled in the art are aware that, in general, single amino acid substitutions in non-essential regions of a polypeptide do not substantially alter the biological activity (see, e.g., Watson et al. (1987) Molecular Biology of the Gene, The Benjamin/Cummings Pub. Co., Page 224, (4th ed.)). In addition, substitution of amino acids with similar structure or function is unlikely to destroy biological activity. One skilled in the art will be able to determine suitable variants of the antigen-binding molecules as set forth herein using well-known techniques. For nucleotide and amino acid sequences, the term "identity" indicates the degree of identity between two nucleic acids or two amino acid sequences when optimally aligned and compared with appropriate insertions or deletions.
術語「Fab」為免疫球蛋白中不含或含一小部分殘餘Fc片段的Fab片段,例如,Fab片斷包括重鍊和輕鏈的可變區、以及所有或部分的第一恆定域。The term "Fab" refers to a Fab fragment of an immunoglobulin that contains no or a small portion of the residual Fc fragment. For example, a Fab fragment includes the variable regions of the heavy and light chains, and all or part of the first constant domain.
術語「Fc」或「Fc區」或「Fc結構域」意指包含抗體的恆定區,在一些情況下排除第一恆定區免疫球蛋白結構域(例如CH1)的全部或一部分,並且在一些情況下進一步排除鉸鏈的全部或一部分的多肽。因此,Fc可指IgA、IgD和IgG的最後兩個恆定區免疫球蛋白結構域(例如CH2和CH3),IgE和IgM的最後三個恆定區免疫球蛋白結構域(例如CH2、CH3和CH4),以及任選地這些結構域的柔性鉸鏈N端的全部或一部分。對於IgA和IgM,Fc可以包含J鏈。對於IgG來說,Fc結構域包含免疫球蛋白結構域CH2和CH3(Cγ2和Cγ3)以及位於CH1(Cγ1)與CH2(Cγ2)之間的較低鉸鏈區。儘管Fc區的邊界可以變化,但是人類IgG重鏈Fc區通常被定義為包括其羧基端的殘基E216、C226或A231,其中編號根據如Kabat中的EU索引。在一些實施方案中,如下文更全面地描述,對Fc區進行氨基酸修飾,例如所述Fc為異源二聚體。The term "Fc" or "Fc region" or "Fc domain" is meant to include the constant region of an antibody, in some cases excluding all or part of the first constant region immunoglobulin domain (eg, CH1), and in some cases The following further excludes polypeptides that are all or part of the hinge. Thus, Fc may refer to the last two constant region immunoglobulin domains (e.g., CH2 and CH3) of IgA, IgD, and IgG, and the last three constant region immunoglobulin domains (e.g., CH2, CH3, and CH4) of IgE and IgM. , and optionally all or part of the N-terminus of the flexible hinge of these domains. For IgA and IgM, the Fc can contain a J chain. For IgG, the Fc domain consists of the immunoglobulin domains CH2 and CH3 (Cγ2 and Cγ3) and the lower hinge region between CH1 (Cγ1) and CH2 (Cγ2). Although the boundaries of the Fc region can vary, the human IgG heavy chain Fc region is generally defined to include residues E216, C226 or A231 at its carboxyl terminus, where numbering is according to the EU index as in Kabat. In some embodiments, as described more fully below, the Fc region is subject to amino acid modifications, eg, the Fc is a heterodimer.
本文的「修飾」是指多肽序列中的氨基酸取代、插入和/或缺失或與蛋白質化學連接的部分的改變。本文的「氨基酸修飾」是指多肽序列中的氨基酸取代、插入和/或缺失。為清楚起見,除非另外指出,否則氨基酸修飾是由DNA編碼的氨基酸,例如在DNA和RNA中具有密碼子的20個氨基酸。"Modification" as used herein refers to amino acid substitutions, insertions and/or deletions in a polypeptide sequence or changes in the portion chemically linked to a protein. "Amino acid modification" herein refers to amino acid substitutions, insertions and/or deletions in a polypeptide sequence. For clarity, unless otherwise stated, amino acid modifications are the amino acids encoded by DNA, such as the 20 amino acids with codons in DNA and RNA.
「表位」在本文中意指與特定抗原結合結構域,例如抗體分子的可變區(稱為互補位)相互作用的決定子。表位是例如氨基酸或糖側鏈的分子的分組,並且通常具有特定的結構特徵以及特定的電荷特徵。單個分子可具有超過一個表位。表位可以包含直接參與結合的氨基酸殘基(也稱為表位的免疫顯性組分)和不直接參與結合的其它氨基酸殘基,例如被特異性抗原結合肽有效阻斷的氨基酸殘基;換句話說,氨基酸殘基在特異性抗原結合肽的覆蓋面積內。表位可以是構形的也可以是線性的。構形表位是由來自線性多肽鏈的不同區段的氨基酸空間並置而產生。線性表位是由多肽鏈中的相鄰氨基酸殘基產生的表位。構形和非構形表位的區別可以在於在變性溶劑存在下,與前者而非後者的結合喪失。表位通常包括獨特空間構象中的至少3個,並且更通常至少5個或8-10個氨基酸。識別相同表位的抗原結合分子可以在簡單的免疫分析中驗證,顯示一種抗原結合分子阻斷另一種抗原結合分子與靶抗原結合的能力。如下所概述,本發明不僅包括本文中所列舉的抗原結合分子和抗原結合結構域,還包括與所列舉的抗原結合分子或抗原結合結構域結合的表位競爭結合的抗原結合分子和抗原結合結構域。"Epitope" as used herein means a determinant that interacts with a specific antigen-binding domain, such as a variable region (called a paratope) of an antibody molecule. Epitopes are groupings of molecules, such as amino acids or sugar side chains, and often have specific structural characteristics as well as specific charge characteristics. A single molecule can have more than one epitope. An epitope may contain amino acid residues that are directly involved in binding (also known as the immunodominant component of the epitope) and other amino acid residues that are not directly involved in binding, such as amino acid residues that are effectively blocked by specific antigen-binding peptides; In other words, the amino acid residues are within the coverage area of the specific antigen-binding peptide. Epitopes can be conformational or linear. Conformational epitopes result from the spatial juxtaposition of amino acids from different segments of a linear polypeptide chain. Linear epitopes are epitopes resulting from adjacent amino acid residues in a polypeptide chain. Conformal and non-conforming epitopes can be distinguished by the loss of binding to the former but not the latter in the presence of denaturing solvents. Epitopes typically include at least 3, and more typically at least 5 or 8-10 amino acids in a unique spatial conformation. Antigen-binding molecules that recognize the same epitope can be verified in a simple immunoassay showing the ability of one antigen-binding molecule to block the binding of another antigen-binding molecule to the target antigen. As summarized below, the present invention not only includes the antigen-binding molecules and antigen-binding domains listed herein, but also includes antigen-binding molecules and antigen-binding structures that compete for binding to the epitope bound by the listed antigen-binding molecules or antigen-binding domains. area.
術語「特異性結合」、「選擇性結合」、「選擇性地結合」和「特異性地結合」是指有指向的、能被相應物質競爭阻斷的某種配基在體外或體內與特異結構位點相互作用的生物結合過程。如抗原和抗體或受體和配體之間的結合。The terms "specific binding", "selective binding", "selectively binding" and "specific binding" refer to a specific ligand that is directed and can be competitively blocked by the corresponding substance in vitro or in vivo. Structural site interactions in biological binding processes. Such as the binding between antigen and antibody or receptor and ligand.
特異性結合的強度或親和力可以根據相互作用的解離常數(KD)表示,其中較小的KD表示較大的親和力,較大的KD表示較低的親和力。例如KD為至少約10 -4M、至少約10 -5M、至少約10 -6M、至少約10 -7M、至少約10 -8M、至少約10 -9M、替代地至少約10 -10M、至少約10 -11M、至少約10 -12M、或更大的抗原結合力來展現。結合特性可以通過所屬領域眾所周知的方法,例如生物層干涉測量法和基於表面等離振子共振的方法來確定。一種這樣的方法需要測量抗原結合位點/抗原或受體/配體複合物締合和解離的速率,其中速率取決於復合物搭配物的濃度、相互作用的親和力以及在兩個方向上同等地影響速率的幾何參數。因此,可以確定締合速率(ka)和解離速率(kd),並且kd/ka的比例等於解離常數KD(《自然(Nature)》361:186-187(1993)和Davies等人(1990)《生物化學年鑑(Annual Rev Biochem)》59:439-473)。 The strength or affinity of specific binding can be expressed in terms of the dissociation constant (KD) of the interaction, where a smaller KD indicates greater affinity and a larger KD indicates lower affinity. For example, the KD is at least about 10 -4 M, at least about 10 -5 M, at least about 10 -6 M, at least about 10 -7 M, at least about 10 -8 M, at least about 10 -9 M, alternatively at least about 10 -10 M, at least about 10 -11 M, at least about 10 -12 M, or greater antigen binding capacity. Binding properties can be determined by methods well known in the art, such as biolayer interferometry and surface plasmon resonance based methods. One such method requires measuring the rates of association and dissociation of antigen-binding site/antigen or receptor/ligand complexes, where the rates depend on the concentration of the complex partners, the affinity of the interaction, and equally in both directions. Geometric parameters that affect velocity. Therefore, the association rate (ka) and the dissociation rate (kd) can be determined, and the ratio kd/ka is equal to the dissociation constant KD (Nature 361:186-187 (1993) and Davies et al. (1990) Annual Rev Biochem 59: 439-473).
術語「免疫細胞」包括參與保護機體抵抗傳染性疾病和外來物質二者的免疫系統的細胞。免疫細胞可以包括例如嗜中性粒細胞,嗜酸性粒細胞,嗜鹼性粒細胞,淋巴細胞,如B細胞和T細胞,和單核細胞。T細胞可以包括例如,CD4+、CD8+、T輔助細胞、細胞毒性T細胞、γδT細胞、調節性T細胞、抑制性T細胞和天然殺傷細胞。The term "immune cells" includes cells of the immune system that participate in protecting the body against both infectious diseases and foreign substances. Immune cells may include, for example, neutrophils, eosinophils, basophils, lymphocytes such as B cells and T cells, and monocytes. T cells can include, for example, CD4+, CD8+, T helper cells, cytotoxic T cells, γδ T cells, regulatory T cells, suppressor T cells, and natural killer cells.
術語「多功能融合多肽」意指設計來靶向兩個或更多個抗原的非天然存在的結合分子。本文所述的「多功能融合多肽」通常是遺傳工程化的融合蛋白,例如其經設計以將兩個不同的所需的生物學功能帶入單個結合分子。例如,多功能融合多肽可以是多功能結合分子。The term "multifunctional fusion polypeptide" means a non-naturally occurring binding molecule designed to target two or more antigens. "Multifunctional fusion polypeptides" as described herein are typically genetically engineered fusion proteins, eg, designed to bring two different desired biological functions into a single binding molecule. For example, a multifunctional fusion polypeptide can be a multifunctional binding molecule.
術語「FiBody」,是利用配體及其受體特異性親和力取代雙特異性抗體部分或全部恆定區,從而得到的雙特異性融合多肽或多功能融合蛋白。本發明中提到的「YBody」技術由武漢友芝友公司於2012年開發,該技術是在「Knob-into-Holes」技術的基礎上,形成異源二聚體的其中一條為正常重鏈,另外一條為Fc功能區的N端鏈接scFv,形成了不對稱的雙特異性抗體。The term "FiBody" refers to a bispecific fusion polypeptide or multifunctional fusion protein obtained by replacing part or all of the constant region of a bispecific antibody with a ligand and its receptor-specific affinity. The "YBody" technology mentioned in the present invention was developed by Wuhan Youzhiyou Company in 2012. This technology is based on the "Knob-into-Holes" technology. One of the heterodimers formed is a normal heavy chain. , and the other is the N-terminal link of the Fc functional region to the scFv, forming an asymmetric bispecific antibody.
「IL15/IL15Rα多肽複合物」是指包含IL15和IL15Rα的多肽複合物,所述IL15與IL15Rα特異性結合形成多肽複合物。"IL15/IL15Rα polypeptide complex" refers to a polypeptide complex including IL15 and IL15Rα, and the IL15 specifically binds to IL15Rα to form a polypeptide complex.
術語「約」或「大約」是指與參照定量、水平、值、數量、頻率、百分比、維度、大小、量、重量或長度相差30、25、20、25、10、9、8、7、6、5、4、3、2或1%的定量、水平、值、數量、頻率、百分比、維度、大小、量、重量或長度。在特定實施方式中,當術語「約」或「大約」位於數值之前時,表示所述值加上或減去15%、10%、5%或1%的範圍。The term "about" or "approximately" means a difference of 30, 25, 20, 25, 10, 9, 8, 7, from a reference quantity, level, value, quantity, frequency, percentage, dimension, size, amount, weight or length. 6, 5, 4, 3, 2 or 1% of quantity, level, value, quantity, frequency, percentage, dimension, size, quantity, weight or length. In certain embodiments, when the term "about" or "approximately" precedes a numerical value, it means the stated value plus or minus a range of 15%, 10%, 5%, or 1%.
除非上下文另有規定,詞語「包含」、「包括」和「含有」將被理解為表示包括所述的步驟或要素或一組步驟或要素,但不排除任何其他步驟或要素或一組步驟或要素。「由……組成」所表示的是包括並且限於短語「由……組成」所接的內容。因此,短語「由……組成」表示所列出的要素是需要的或必需的,並且沒有其他要素可存在。「基本由……組成」所表示的是包括列於此短語之後的任意要素,並且限於有助於或不妨礙所列的要素的如在本發明中詳述的活性或作用的其他要素。因此,短語「基本由……組成」表示所列出的要素是需要的或必需的,但其他要素是可選地並可取決於其是否影響所列出的要素的活性或作用而存在或不存在。Unless the context otherwise requires, the words "comprising", "includes" and "containing" will be understood to mean the inclusion of a stated step or element or group of steps or elements but not the exclusion of any other step or element or group of steps or elements. "Consisting of" means including and being limited to the content following the phrase "consisting of." Thus, the phrase "consisting of" means that the listed elements are required or necessary and that no other elements can be present. "Consisting essentially of" is intended to include any of the elements listed after this phrase and is limited to other elements that contribute to or do not interfere with the activity or role of the listed elements as detailed in this invention. Thus, the phrase "consisting essentially of" means that the listed elements are required or required, but that other elements are optional and may be present depending on whether they affect the activity or action of the listed elements or does not exist.
在本發明全文中提及的「一個實施方式」、「實施方式」、「特定實施方式」、「相關實施方式”、「某種實施方式」、「另外的實施方式」或「進一步的實施方式」或其組合表示所描述的與所述實施方式相關的特定特徵、結構或特性包含於本發明的至少一個實施方式中。因此,在本說明書全文各處出現前述用語未必都指同一實施方式。此外,所述特定特徵、結構或特性可在一個或多個實施方式中以任意適宜方式組合。“One embodiment”, “implementation”, “specific embodiment”, “related embodiment”, “certain embodiment”, “another embodiment” or “further embodiment” mentioned throughout the present invention ” or a combination thereof means that a specific feature, structure or characteristic described in connection with the embodiment is included in at least one embodiment of the present invention. Therefore, the aforementioned terms appearing in various places throughout this specification do not necessarily refer to the same implementation. Furthermore, the particular features, structures or characteristics may be combined in any suitable manner in one or more embodiments.
術語「任選地」僅用於描述目的,而不能理解為指示或暗示相對重要性。由此,限定有「任選地」的特徵可以明示或者隱含地包括或不包括該特徵。The term "optionally" is used for descriptive purposes only and is not to be construed as indicating or implying relative importance. Thus, a feature qualified with "optionally" may explicitly or implicitly include or exclude that feature.
在說明書和權利要求中的術語「第一」、「第二」用於區分相似元素,而不一定用於描述順序或時間次序。應當理解,如此使用的術語在合適環境下是可互換的,並且本文描述的本發明的實施方案能夠以與本文描述或舉例說明不同的其他順序操作。 雙特異性融合多肽 The terms "first" and "second" in the description and claims are used to distinguish similar elements and are not necessarily used to describe a sequence or temporal order. It is to be understood that the terms so used are interchangeable under appropriate circumstances and that the embodiments of the invention described herein are capable of operation in other sequences than described or illustrated herein. bispecific fusion peptides
本發明提供了新的雙特異性融合多肽,其包含配體(或其片段)及其受體(或其片段),所述配體(或其片段)及其受體(或其片段)分別獨立地替換抗體一側Fab的CH1和CL,具體地,所述雙特異性融合多肽包含第一抗原結合部分,所述第一抗原結合部分包含:第一多肽,所述第一多肽自N末端至C末端包含第一抗體的第一重鏈可變結構域VH1,其可操作性地連接至第一綴合片段;和第二多肽,所述第二多肽自N末端至C末端包含第一抗體的第一輕鏈可變結構域VL1,其可操作地連接至第二綴合片段;其中,所述第一綴合物片段為受體,所述第二綴合片段為配體;或者所述第一綴合物片段為配體,所述第二綴合片段為受體。The invention provides novel bispecific fusion polypeptides, which comprise a ligand (or a fragment thereof) and a receptor (or a fragment thereof) thereof, which are respectively Independently replace CH1 and CL of Fab on one side of the antibody. Specifically, the bispecific fusion polypeptide includes a first antigen-binding portion, and the first antigen-binding portion includes: a first polypeptide, and the first polypeptide is from The N-terminus to the C-terminus includes the first heavy chain variable domain VH1 of the first antibody operably linked to the first conjugation fragment; and a second polypeptide from the N-terminus to the C-terminus The terminus comprises the first light chain variable domain VL1 of the first antibody, which is operably linked to a second conjugation fragment; wherein the first conjugation fragment is a receptor and the second conjugation fragment is Ligand; or the first conjugate fragment is a ligand, and the second conjugate fragment is a receptor.
在一些實施方式中,所述雙特異性融合多肽具有:第一多肽,其從N端到C端依次為:[VH1]-[連接子1]-[IL15]-[連接子2]-[CH2]-[CH3],第二多肽,其從N端到C端依次為:[VL1]-[連接子3]-[ [IL15RA];在一些實施方式中,所述雙特異性融合多肽具有:第一多肽,其從N端到C端依次為:[VH1]-[連接子1]-[IL15RA]-[連接子2]-[CH2]-[CH3],第二多肽,其從N端到C端依次為:[VL1]-[連接子3]-[IL15]。其中,所述CH2和CH3為重鏈恆定區亞基,所述連接子1、連接子2和連接子3為連接多肽的連接子,其可以相同,也可以不相同;在一些實施方案中,所述連接子1、連接子2和連接子3獨立選自(GxS)y連接子,其中,x選自1-5的整數,y選自0-6的整數。In some embodiments, the bispecific fusion polypeptide has: a first polypeptide, which from the N-terminus to the C-terminus is: [VH1]-[Linker 1]-[IL15]-[Linker 2]- [CH2]-[CH3], the second polypeptide, which from the N-terminus to the C-terminus is: [VL1]-[linker 3]-[[IL15RA]; in some embodiments, the bispecific fusion The polypeptide has: a first polypeptide, which from N-terminus to C-terminus is: [VH1]-[Linker 1]-[IL15RA]-[Linker 2]-[CH2]-[CH3], a second polypeptide , from N end to C end: [VL1]-[Connector 3]-[IL15]. Wherein, the CH2 and CH3 are heavy chain constant region subunits, and the
在一些實施方式中,所述雙特異性融合多肽還包含第二抗原結合部分,所述第二抗原結合部分與第一抗原結合部分不同;所述第二抗原結合部分可選自:In some embodiments, the bispecific fusion polypeptide further comprises a second antigen-binding portion that is different from the first antigen-binding portion; the second antigen-binding portion can be selected from:
1.抗體另一側Fab的CH1和CL被另一種配體(或其片段)及其受體(或其片段)替換,即所述第二抗原結合部分包括:第三多肽,所述第三多肽自N末端至C末端包含第二抗體的第二重鏈可變結構域VH2,其可操作性地連接至第三綴合片段,和第四多肽,所述第四多肽自N末端至C末端包含第二抗體的第二輕鏈可變結構域VL2,其可操作地連接至第四綴合片段;其中,所述第三綴合物片段為受體,所述第四綴合片段為配體;或者所述第三綴合物片段為配體,所述第四綴合片段為受體;所述第三綴合片段/第四綴合物片段與所述第一綴合物片段/第二綴合物片段選自不同的受體/配體,所述第三綴合片段和所述第四綴合物片段能夠特異性結合;或者1. CH1 and CL of the Fab on the other side of the antibody are replaced by another ligand (or fragment thereof) and its receptor (or fragment thereof), that is, the second antigen-binding part includes: a third polypeptide, the third polypeptide The peptide comprises from the N-terminus to the C-terminus the second heavy chain variable domain VH2 of the second antibody operably linked to the third conjugation fragment, and a fourth polypeptide from the N-terminus to the C-terminus Comprising the second light chain variable domain VL2 of the second antibody to the C-terminus, which is operably linked to a fourth conjugate fragment; wherein the third conjugate fragment is a receptor, and the fourth conjugate fragment The fragment is a ligand; or the third conjugate fragment is a ligand, and the fourth conjugate fragment is a receptor; the third conjugate fragment/fourth conjugate fragment is conjugated with the first The substance fragment/second conjugate fragment is selected from different receptors/ligands, and the third conjugate fragment and the fourth conjugate fragment are capable of specific binding; or
2.抗體另一側Fab保留原來的CH1和CL,即,所述第二抗原結合部分包括:第三多肽,所述第三多肽自N末端至C末端包含第二抗體的第二重鏈可變結構域VH2,其可操作性地連接至抗體重鏈恆定區CH1,和第四多肽,所述第四多肽自N末端至C末端包含第二抗體的第二輕鏈可變結構域VL2,其可操作地連接至抗體輕鏈恆定區CL。2. The Fab on the other side of the antibody retains the original CH1 and CL, that is, the second antigen-binding part includes: a third polypeptide, and the third polypeptide includes the second heavy chain of the second antibody from the N-terminus to the C-terminus. Variable domain VH2 operably linked to the antibody heavy chain constant region CH1, and a fourth polypeptide comprising the second light chain variable domain of the second antibody from the N-terminus to the C-terminus VL2, which is operably linked to the antibody light chain constant region CL.
本發明利用配體及其受體本身特有的特異性結合力,將其創造性地與抗原結合區(抗體可變區VH/VL)可操作性地連接,所述連接包括與其中之一抗原結合區連接,另一抗原結合區仍與CH1和CL連接;或者兩種抗原結合區都與配體/受體連接,但兩種抗原結合區連接不同種類的配體/受體,從而避免不同抗原結合區的輕重鏈發生錯配。The present invention utilizes the unique specific binding force of the ligand and its receptor to creatively operably connect it to the antigen-binding region (antibody variable region VH/VL). The connection includes binding to one of the antigens. region is connected, and the other antigen-binding region is still connected to CH1 and CL; or both antigen-binding regions are connected to ligands/receptors, but the two antigen-binding regions are connected to different types of ligands/receptors, thereby avoiding different antigens Mismatching occurs between the light and heavy chains in the binding region.
在一些實施方式中,本發明提供的雙特異性融合多肽是一種多功能融合多肽,其包含2種Fab,其中一個Fab的CH1和CL獨立地被配體及其受體所取代,另一個Fab的CH1和CL未被取代,所述受體既包含識別並結合配體的活性部位,也包含產生應答反應的功能活性部位;所述第一抗原結合部分的輕鏈不會與所述第二抗原結合部分的重鏈錯配。在一些實施方式中,其中一個Fab的CH1和CL獨立地被第一配體及其受體所取代,另一側Fab的CH1和CL獨立地被第二配體及其受體取代,所述第一配體及其受體與所述第二配體及其受體不同。In some embodiments, the bispecific fusion polypeptide provided by the present invention is a multifunctional fusion polypeptide that contains two Fabs, in which CH1 and CL of one Fab are independently replaced by ligands and their receptors, and the other Fab CH1 and CL are not substituted, and the receptor includes both an active site that recognizes and binds ligands and a functional active site that generates a response; the light chain of the first antigen-binding portion does not interact with the second Heavy chain mismatch in the antigen-binding portion. In some embodiments, CH1 and CL of one Fab are independently replaced by the first ligand and its receptor, and CH1 and CL of the Fab on the other side are independently replaced by the second ligand and its receptor, said The first ligand and its receptor are different from the second ligand and its receptor.
所述多功能融合蛋白不僅能發揮雙靶點特異性,且能發揮配體/受體傳導的生物學活性。例如,在某個特定的實施方式中,所述配體及其受體為IL15和IL15Rα,所述多功能融合多肽除具有雙靶點靶向作用外,IL15Rα還能將IL-15遞呈給IL-2/15Rβγ二聚體形成三元復合物,激活JAK和STAT型號通路,促進靶細胞增殖與活化、IFN-γ、TNF-α分泌水平提升;JAK/STAT,Ras/MAPK—增強增殖信號;Bcl-2、Bcl-XL(抗凋亡蛋白)的上調、Bim、Puma(促凋亡蛋白)的下調--減弱凋亡信號。The multifunctional fusion protein can not only exert dual target specificity, but also exert biological activity of ligand/receptor transmission. For example, in a specific embodiment, the ligand and its receptor are IL15 and IL15Rα. In addition to the dual-target targeting effect, the multifunctional fusion polypeptide can also present IL-15 to IL15Rα. IL-2/15Rβγ dimer forms a ternary complex, activates JAK and STAT pathways, promotes target cell proliferation and activation, and increases IFN-γ and TNF-α secretion levels; JAK/STAT, Ras/MAPK—enhance proliferation signals ; Up-regulation of Bcl-2 and Bcl-XL (anti-apoptotic proteins), down-regulation of Bim and Puma (pro-apoptotic proteins) - weakening apoptotic signals.
在一些實施方式中,所述雙特異性融合多肽具有:第一多肽,其從N端到C端依次為:[VH1]-[連接子1]-[IL15]-[連接子2]-[Fc1],第二多肽,其從N端到C端依次為:[VL1]-[連接子3]-[IL15RA] ,第三多肽,其從N端到C端依次為:[VH2]-[Fc2],和第四多肽,其從N端到C端依次為:[VL2]-[CL];在一些實施方式中,所述雙特異性融合多肽具有:第一多肽,其從N端到C端依次為:[VH1]-[連接子1]-[IL15RA]-[連接子2]-[Fc1],第二多肽,其從N端到C端依次為:[VL1]-[連接子3]-[IL15],第三多肽,其從N端到C端依次為:[VH2]- -[Fc2],和第四多肽,其從N端到C端依次為:[VL2]-[CL]。其中,所述Fc1和Fc2為重鏈恆定區Fc的2個亞基,可以相同,也可以不相同,優選的所述Fc恆定區是異源二聚體(異二聚體Fc融合蛋白);在一些實施方案中,所述Fc恆定區為基於KiH、疏水相互作用、靜電相互作用、親水相互作用和/或增加的柔性而締合成為異源二聚體。所述連接子1、連接子2和連接子3為連接多肽的連接子,其可以相同,也可以不相同;在一些實施方案中,所述連接子1、連接子2和連接子3獨立選自(GxS)y連接子,其中,x選自1-5的整數,y選自0-6的整數。In some embodiments, the bispecific fusion polypeptide has: a first polypeptide, which from the N-terminus to the C-terminus is: [VH1]-[Linker 1]-[IL15]-[Linker 2]- [Fc1], the second polypeptide, from the N terminus to the C terminus is: [VL1]-[Linker 3]-[IL15RA], the third polypeptide, the sequence from the N terminus to the C terminus is: [VH2 ]-[Fc2], and a fourth polypeptide, which in order from N terminus to C terminus is: [VL2]-[CL]; in some embodiments, the bispecific fusion polypeptide has: a first polypeptide, From the N terminus to the C terminus, it is: [VH1]-[Linker 1]-[IL15RA]-[Linker 2]-[Fc1]. The second polypeptide, from the N terminus to the C terminus, is: [ VL1]-[Linker 3]-[IL15], the third polypeptide, which from N-terminus to C-terminus is: [VH2]- -[Fc2], and the fourth polypeptide, which from N-terminus to C-terminus The order is: [VL2]-[CL]. Wherein, the Fc1 and Fc2 are two subunits of the heavy chain constant region Fc, which may be the same or different. Preferably, the Fc constant region is a heterodimer (heterodimer Fc fusion protein); in In some embodiments, the Fc constant regions associate as heterodimers based on KiH, hydrophobic interactions, electrostatic interactions, hydrophilic interactions, and/or increased flexibility. The
在一些實施方式中,所VH1和VL1配合形成特異性結合TIGIT的抗原結合位點,所VH2和VL2配合形成特異性結合PD-L1的抗原結合位點。在一些實施方式中,所VH1和VL1配合形成特異性結合PD-L1的抗原結合位點,所VH2和VL2配合形成特異性結合TIGIT的抗原結合位點。在一些實施方式中,所述結合TIGIT的抗原結合部分包括重鏈可變區和輕鏈可變區,其中重鏈可變區包括SEQ ID NO.73或與其具有至少80%(例如至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%)序列同一性的序列,輕鏈可變區包括SEQ ID NO.74或與其具有至少80%(例如至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%)序列同一性的序列。在一些實施方式中,其中所述結合TIGIT的抗原結合部分的重鏈可變區包括HCDR1、HCDR2和HCDR3區,所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.73中的HCDR1、HCDR2和HCDR3,在一些實施方式中,其中所述輕鏈可變區包括LCDR1、LCDR2和LCDR3區,所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.74中的LCDR1、LCDR2和LCDR3;在一些實施方案中,所述HCDR1、HCDR2、HCDR3、LCDR1、LCDR2和LCDR3由IMGT編號系統定義,或由Kabat編號系統定義,或由Chothia 編號系統定義,或由Contact編號系統定義,或由AbM編號系統定義。在一些實施方式中,所述結合PD-L1的抗原結合部分包括重鏈可變區和輕鏈可變區,其中所述重鏈可變區包括SEQ ID NO.36或與其具有至少80%序列同一性的序列,輕鏈可變區包括SEQ ID NO.37或與其具有至少80%序列同一性的序列;在一些實施方式中,所述結合PD-L1的抗原結合部分包括重鏈可變區和輕鏈可變區,其中所述重鏈可變區包括SEQ ID NO.71或與其具有至少80%序列同一性的序列,輕鏈可變區包括SEQ ID NO.72或與其具有至少80%序列同一性的序列;在一些實施方式中,所述結合PD-L1的抗原結合部分包括重鏈可變區和輕鏈可變區,其中所述重鏈可變區包括SEQ ID NO.75或與其具有至少80%序列同一性的序列,輕鏈可變區包括SEQ ID NO.76或與其具有至少80%序列同一性的序列;所述具有至少80%序列同一性的序列,可以是例如具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%序列同一性的序列。在一些實施方式中,所述結合PD-L1的抗原結合部分的重鏈可變區包括HCDR1、HCDR2和HCDR3區,輕鏈可變區包括LCDR1、LCDR2和LCDR3區,其中:1)所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.36中的HCDR1、HCDR2和HCDR3,所述所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.37中的LCDR1、LCDR2和LCDR3;2)所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.71中的HCDR1、HCDR2和HCDR3,所述所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.72中的LCDR1、LCDR2和LCDR3;或者3)所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.75中的HCDR1、HCDR2和HCDR3,所述所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.76中的LCDR1、LCDR2和LCDR3。在一些實施方案中,所述HCDR1、HCDR2、HCDR3、LCDR1、LCDR2和LCDR3由IMGT編號系統定義,或由Kabat編號系統定義,或由Chothia 編號系統定義,或由Contact編號系統定義,或由AbM編號系統定義。In some embodiments, VH1 and VL1 cooperate to form an antigen-binding site that specifically binds TIGIT, and VH2 and VL2 cooperate to form an antigen-binding site that specifically binds PD-L1. In some embodiments, VH1 and VL1 cooperate to form an antigen-binding site that specifically binds PD-L1, and VH2 and VL2 cooperate to form an antigen-binding site that specifically binds TIGIT. In some embodiments, the TIGIT-binding antigen-binding portion includes a heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes or is at least 80% (eg, at least 80%) SEQ ID NO. , 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97 %, 98% or 99%) sequence identity, the light chain variable region includes SEQ ID NO. 74 or has at least 80% (e.g., at least 80%, 81%, 82%, 83%, 84%, 85) sequence identity with SEQ ID NO. %, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99%) sequence identity. In some embodiments, wherein the heavy chain variable region of the antigen-binding portion that binds TIGIT includes HCDR1, HCDR2, and HCDR3 regions, the HCDR1, HCDR2, and HCDR3 respectively include HCDR1, HCDR2, and HCDR3 in SEQ ID NO. 73 , in some embodiments, wherein the light chain variable region includes LCDR1, LCDR2 and LCDR3 regions, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO. 74; in some embodiments , the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the IMGT numbering system, or by the Kabat numbering system, or by the Chothia numbering system, or by the Contact numbering system, or by the AbM numbering system. In some embodiments, the antigen-binding portion that binds PD-L1 includes a heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes or has at least 80% the sequence of SEQ ID NO. 36 Identity sequence, the light chain variable region includes SEQ ID NO. 37 or a sequence with at least 80% sequence identity thereto; in some embodiments, the antigen-binding portion that binds PD-L1 includes the heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes SEQ ID NO. 71 or a sequence having at least 80% sequence identity thereto, and the light chain variable region includes SEQ ID NO. 72 or has at least 80% sequence identity thereto Sequences of sequence identity; in some embodiments, the antigen-binding portion that binds PD-L1 includes a heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes SEQ ID NO. 75 or The light chain variable region includes SEQ ID NO. 76 or a sequence having at least 80% sequence identity therewith; the sequence having at least 80% sequence identity may, for example, have At least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96 %, 97%, 98% or 99% sequence identity. In some embodiments, the heavy chain variable region of the antigen-binding portion that binds to PD-L1 includes HCDR1, HCDR2, and HCDR3 regions, and the light chain variable region includes LCDR1, LCDR2, and LCDR3 regions, wherein: 1) the HCDR1 , HCDR2 and HCDR3 respectively include HCDR1, HCDR2 and HCDR3 in SEQ ID NO.36, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO.37; 2) the HCDR1, HCDR2 and HCDR3 respectively include HCDR1, HCDR2 and HCDR3 in SEQ ID NO.71, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO.72; or 3) the HCDR1, HCDR2 and HCDR3 respectively includes HCDR1, HCDR2 and HCDR3 in SEQ ID NO.75, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO.76. In some embodiments, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the IMGT numbering system, or by the Kabat numbering system, or by the Chothia numbering system, or by the Contact numbering system, or by AbM numbering System definition.
在一些實施方式中,所述IL15和IL15Rα之間具有一個非天然的鏈間鍵,所述非天然鏈間鍵形成於IL15的第一突變殘基和IL15Rα的第二突變殘基之間,在一些技術方案中,所述IL15第一突變殘基為第90位的E突變為C,所述IL15Rα第二突變殘基為第67位的P突變位C;在一些技術方案中,所述IL15第一突變殘基為第93位的E突變為C,所述IL15Rα第二突變殘基為第35位的R突變位C;所述IL15的氨基酸殘基突變位點為參照SEQ ID NO:26對應的自然順序編號位點,所述IL15Rα的氨基酸殘基突變位點為參照SEQ ID NO:27對應的自然順序編號位點。在一些實施方式中,所述IL15為SEQ ID NO.84所示的氨基酸序列或其突變序列,所述突變序列例如包括選自D61N、E64Q和/或N65D氨基酸突變,和/或選自N71Q、N79Q和/或N112Q氨基酸突變。所述IL15Rα包含SEQ ID NO.28或其突變序列、SEQ ID NO.77或其突變序列、SEQ ID NO.78或其突變序列、SEQ ID NO.79或其突變序列、SEQ ID NO.80或其突變序列、或SEQ ID NO.81或其突變序列;在一些實施方式中,所述突變序列包括選自T2A、T81A和/或T86A的氨基酸突變;在一些實施方式中,所述突變序列包括P67C氨基酸突變;在一些實施方式中,所述突變序列包括P67C氨基酸突變,還包括選自T2A、T81A和/或T86A的氨基酸突變。在一些實施方式中,所述IL15Rα為SEQ ID NO.77或其突變序列、SEQ ID NO.78或其突變序列、SEQ ID NO.79或其突變序列、SEQ ID NO.80或其突變序列、或SEQ ID NO.81或其突變序列;在一些實施方式中,所述突變為P67C氨基酸突變;在一些實施方式中,所述突變為P67C以及選自T2A、T81A和/或T86A的氨基酸突變;在一些實施方式中,所述突變為選自T2A、T81A和/或T86A的氨基酸突變。前述IL15Rα的氨基酸殘基突變位點為參照SEQ ID NO:27對應的自然順序編號位點。在一些實施方式中,所述IL15選自與SEQ ID NO.84序列具有至少80%(例如至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%)序列同一性的序列,所述IL15RA選自與SEQ ID NO.77-81任一所示序列具有至少80%(例如至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%)序列同一性的序列。 i. 配體和受體 In some embodiments, there is an unnatural interchain bond between IL15 and IL15Rα, and the unnatural interchain bond is formed between a first mutated residue of IL15 and a second mutated residue of IL15Rα, In some technical solutions, the first mutated residue of IL15 is the E mutation at position 90 to C, and the second mutated residue of IL15Rα is the P mutation at position C at position 67; in some technical solutions, the IL15 The first mutated residue is the E mutation at position 93 to C, and the second mutated residue of IL15Rα is the R mutation position C at position 35; the amino acid residue mutation site of IL15 is with reference to SEQ ID NO: 26 The corresponding natural sequence numbering site, the amino acid residue mutation site of IL15Rα is the natural sequence numbering site corresponding to SEQ ID NO: 27. In some embodiments, the IL15 is the amino acid sequence shown in SEQ ID NO. 84 or a mutant sequence thereof. The mutant sequence includes, for example, amino acid mutations selected from D61N, E64Q and/or N65D, and/or selected from N71Q, N79Q and/or N112Q amino acid mutations. The IL15Rα comprises SEQ ID NO.28 or its mutant sequence, SEQ ID NO.77 or its mutant sequence, SEQ ID NO.78 or its mutant sequence, SEQ ID NO.79 or its mutant sequence, SEQ ID NO.80 or Its mutation sequence, or SEQ ID NO. 81 or its mutation sequence; In some embodiments, the mutation sequence includes an amino acid mutation selected from T2A, T81A and/or T86A; In some embodiments, the mutation sequence includes P67C amino acid mutation; in some embodiments, the mutation sequence includes the P67C amino acid mutation, and also includes an amino acid mutation selected from T2A, T81A and/or T86A. In some embodiments, the IL15Rα is SEQ ID NO.77 or a mutant sequence thereof, SEQ ID NO.78 or a mutant sequence thereof, SEQ ID NO.79 or a mutant sequence thereof, SEQ ID NO.80 or a mutant sequence thereof, Or SEQ ID NO.81 or its mutant sequence; in some embodiments, the mutation is a P67C amino acid mutation; in some embodiments, the mutation is P67C and an amino acid mutation selected from T2A, T81A and/or T86A; In some embodiments, the mutation is an amino acid mutation selected from T2A, T81A, and/or T86A. The aforementioned amino acid residue mutation site of IL15Rα refers to the natural sequence numbering site corresponding to SEQ ID NO: 27. In some embodiments, the IL15 is selected from the group consisting of SEQ ID NO. %, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99%) sequence identity, the IL15RA is selected from the group consisting of SEQ ID NO. .77-81 Any sequence shown has at least 80% (e.g., at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91 %, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99%) sequence identity. i. Ligands and receptors
「受體(receptor)」是細胞膜上或細胞內能識別生物活性分子並與之結合的物質,能與受體結合的生物活性物質統稱為「配體(ligand)」。"Receptor" is a substance on the cell membrane or within a cell that can recognize and bind to biologically active molecules. Bioactive substances that can bind to receptors are collectively called "ligands."
根據受體在細胞中的位置,將其分為細胞表面受體和細胞內受體兩大類。受體本身至少含有兩個活性部位:一個是識別並結合配體的活性部位;另一個是負責產生應答反應的功能活性部位,這一部位只有在與配體結合形成二元復合物並變構後才能產生應答反應,由此啟動一系列的生化反應,最終導致靶細胞產生生物效應。According to the location of the receptors in the cell, they are divided into two categories: cell surface receptors and intracellular receptors. The receptor itself contains at least two active sites: one is the active site that recognizes and binds the ligand; the other is the functional active site responsible for generating the response. This site only forms a binary complex with the ligand and is allosteric. Only then can a response be generated, thus initiating a series of biochemical reactions that ultimately lead to biological effects on the target cells.
受體一般為糖蛋白,野生型受體與配體之間的結合不通過共價鍵介導,主要靠離子鍵、氫鍵、范德華力和疏水作用而相互結合。受體在與配體結合時,具有飽和性、高親和性、專一性等特性。Receptors are generally glycoproteins. The binding between wild-type receptors and ligands is not mediated by covalent bonds, but mainly relies on ionic bonds, hydrogen bonds, van der Waals forces and hydrophobic interactions. Receptors have characteristics such as saturation, high affinity, and specificity when binding to ligands.
互相配合的受體和配體具有相對特異結合的親和力,以及任選的生物學效應。在一些實施方式中,所述受體僅包含識別並結合配體的活性部位,不包含產生應答反應的功能活性部位(例如激活下游信號通路的生物學效應的功能)。在一些實施方式中,所述受體和/或配體為天然的受配體結構,所述受體既包含識別結合配體的活性部位,又包含負責產生應答反應的功能活性部位,能夠發揮相應的生物學功能,所述雙特異性融合蛋白是一種多功能融合蛋白,不僅具有雙特異性,而且能發揮配受體功能。Cooperating receptors and ligands have relatively specific binding affinities and, optionally, biological effects. In some embodiments, the receptor only contains an active site that recognizes and binds a ligand, and does not contain a functional active site that generates a response (eg, a function that activates a biological effect of a downstream signaling pathway). In some embodiments, the receptor and/or ligand is a natural receptor ligand structure. The receptor includes both an active site that recognizes the binding ligand and a functional active site that is responsible for generating a response, and can exert Corresponding biological function, the bispecific fusion protein is a multifunctional fusion protein that not only has bispecificity, but also can function as a ligand receptor.
在一些實施方式中,所述受體和/或配體在天然序列的基礎上做了修飾,所述修飾包括但不限於:截短、插入和/或突變;這些修飾的目的包括但不限於:增加或降低配體和受體的結合力;增強、降低或消除配體受體的生物學功能;增加、減少或消除受體和或配體蛋白中的糖基化位點;降低或消除受配體毒性。In some embodiments, the receptor and/or ligand are modified based on the natural sequence, and the modifications include, but are not limited to: truncation, insertion, and/or mutation; the purposes of these modifications include, but are not limited to : Increase or decrease the binding force between ligand and receptor; enhance, decrease or eliminate the biological function of ligand receptor; increase, decrease or eliminate glycosylation sites in receptor and/or ligand protein; decrease or eliminate Ligand toxicity.
在一些實施方式中,所述受體和/或配體的氨基酸序列各自獨立地由10~1000個氨基酸組成;在一些實施方式中,所述受體和/或配體的氨基酸序列各自獨立地由20~800個氨基酸組成;在一些實施方式中,所述受體和/或配體的氨基酸序列各自獨立地由30~600個氨基酸組成;在一些實施方式中,所述受體和/或配體的氨基酸序列各自獨立地由40~400個氨基酸組成;在一些實施方式中,所述受體和/或配體的氨基酸序列各自獨立地由50~300個氨基酸組成;在一些實施方式中,所述受體和/或配體的氨基酸序列各自獨立地由55~260個氨基酸組成。例如,受體和/或配體的氨基酸序列也可以獨立地選自20、30、40、50、60、70、80、90、100、150、200、300、400、500、600、700、800、900個氨基酸。In some embodiments, the amino acid sequences of the receptors and/or ligands each independently consist of 10 to 1000 amino acids; in some embodiments, the amino acid sequences of the receptors and/or ligands each independently consist of Composed of 20 to 800 amino acids; in some embodiments, the amino acid sequences of the receptor and/or ligand each independently consist of 30 to 600 amino acids; in some embodiments, the receptor and/or The amino acid sequences of the ligands each independently consist of 40 to 400 amino acids; in some embodiments, the amino acid sequences of the receptor and/or ligand each independently consist of 50 to 300 amino acids; in some embodiments , the amino acid sequences of the receptor and/or ligand each independently consist of 55 to 260 amino acids. For example, the amino acid sequence of the receptor and/or the ligand can also be independently selected from 20, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200, 300, 400, 500, 600, 700, 800, 900 amino acids.
在一些實施方式中,所述受體和/或配體分子量各自獨立地選自1KD~100KD; 在一些實施方式中,所述受體和/或配體分子量各自獨立地選自2KD~80KD;在一些實施方式中,所述受體和/或配體分子量各自獨立地選自3KD~70KD;在一些實施方式中,所述受體和/或配體分子量各自獨立地選自4KD~60KD;在一些實施方式中,所述受體和/或配體分子量各自獨立地選自4KD~50KD;在一些實施方式中,所述受體和/或配體分子量各自獨立地選自4KD~40KD;在一些實施方式中,所述受體和/或配體分子量各自獨立地選自5KD~30KD。例如,受體和/或配體的分子量可以獨立地選自1KD、2KD、3KD、4KD、4.5KD、5KD、6KD、7KD、8KD、9KD、10KD、11KD、15KD、18KD、20KD、25KD、30KD、35KD、40KD、45KD、50KD、60KD、70KD、80KD、90KD、100KD。In some embodiments, the molecular weight of the receptor and/or ligand is each independently selected from 1KD~100KD; In some embodiments, the molecular weight of the receptor and/or ligand is each independently selected from 2KD~80KD; In some embodiments, the molecular weight of the receptor and/or ligand is each independently selected from 3KD~70KD; in some embodiments, the molecular weight of the receptor and/or ligand is each independently selected from 4KD~60KD; In some embodiments, the molecular weight of the receptor and/or ligand is each independently selected from 4KD~50KD; in some embodiments, the molecular weight of the receptor and/or ligand is each independently selected from 4KD~40KD; In some embodiments, the receptor and/or ligand molecular weights are each independently selected from 5 KD to 30 KD. For example, the molecular weight of the receptor and/or ligand can be independently selected from 1KD, 2KD, 3KD, 4KD, 4.5KD, 5KD, 6KD, 7KD, 8KD, 9KD, 10KD, 11KD, 15KD, 18KD, 20KD, 25KD, 30KD , 35KD, 40KD, 45KD, 50KD, 60KD, 70KD, 80KD, 90KD, 100KD.
受體(或其片段)和其相應的配體(或其片段)的結合方式可以是共價結合、非共價相互作用或其組合;非共價鍵的例子包括,但不限於,氫鍵、疏水鍵、離子鍵、和范德華鍵。在一些實施方式中,當被插入或替換的綴合片段之間的親和力低於預期時(例如不能拉近抗原結合部分中的兩個可變區以使其獲得特異性識別抗原的功能,或者不能防止2個或多個重鏈恆定區之間的重鏈錯配,或者不能防止抗原結合部分之間錯配以實現特定VL-VH部分的組合),可以通過對抗體所述配體和/或受體進行改造以增加親和力。在一些實施方式中,所述受體和配體之間包含至少一個非天然的鏈間鍵,所述非天然鏈間鍵能夠增強受體和配體間的特異性結合力;在一些實施方式中,所述非天然鏈間鍵形成於受體包含的第一突變殘基和配體包含的第二突變殘基之間;在一些實施方式中,所述第一和所述第二突變殘基中的至少一個為半胱氨酸殘基;在一些實施方式中,所述非天然鏈間鍵為二硫鍵。The binding mode of the receptor (or fragment thereof) and its corresponding ligand (or fragment thereof) may be covalent binding, non-covalent interaction, or a combination thereof; examples of non-covalent bonds include, but are not limited to, hydrogen bonds , hydrophobic bonds, ionic bonds, and van der Waals bonds. In some embodiments, when the affinity between the inserted or replaced conjugated fragments is lower than expected (e.g., the two variable regions in the antigen-binding portion cannot be brought closer to allow them to obtain the function of specifically recognizing the antigen, or Inability to prevent heavy chain mismatching between 2 or more heavy chain constant regions, or inability to prevent mismatching between antigen-binding moieties to achieve a specific VL-VH moiety combination), can be achieved by pairing the antibody with the ligand and/or Or the receptor is modified to increase affinity. In some embodiments, the receptor and the ligand contain at least one non-natural interchain bond, and the non-natural interchain bond can enhance the specific binding force between the receptor and the ligand; in some embodiments wherein the unnatural interchain bond is formed between a first mutated residue comprised by the receptor and a second mutated residue comprised by the ligand; in some embodiments, the first and second mutated residues At least one of the groups is a cysteine residue; in some embodiments, the non-natural interchain bond is a disulfide bond.
「非天然的鏈間鍵」是指在野生型多肽聚合物中未發現的鏈間鍵。例如,非天然鏈間鍵可以在一條多肽的突變的氨基酸殘基和另一條多肽的突變氨基酸殘基之間形成。"Unnatural interchain linkages" refer to interchain linkages not found in wild-type polypeptide polymers. For example, a non-natural interchain bond can be formed between a mutated amino acid residue of one polypeptide and a mutated amino acid residue of another polypeptide.
在一些實施方式中,其中至少一個天然糖基化位點在所述受體和/或配體中不存在。In some embodiments, at least one native glycosylation site is absent in the receptor and/or ligand.
在一些實施方式中,所述受體和配體選自白細胞介素及其受體。In some embodiments, the receptors and ligands are selected from interleukins and their receptors.
發明人對大量的白細胞介素及其受體進行了立體構像研究,發現大量的白細胞介素或IFN類分子立體構像可以分為4類:A類-托舉型、B類-蝴蝶結型、C-棒球手型、D類-鉗型,如表1所示:The inventor conducted three-dimensional conformation studies on a large number of interleukins and their receptors, and found that the three-dimensional conformations of a large number of interleukins or IFN molecules can be divided into four categories: type A - lift type, type B - bowtie type. , C-baseball hand type, type D-clamp type, as shown in Table 1:
表1. 立體構像分類
在一些實施例中,所述配體及其受體選自A類白細胞介素及其受體,例如IL15/IL15R、IL2/IL2R、IL4/ IL-4Rα+Rγ、IL-6/ IL-6R、IL-11/ IL-11R、IL-13/ IL-13R1、IL-20/ IL20Rα+IL20Rβ、IL24/ IL20Rα+IL20Rβ。In some embodiments, the ligand and its receptor are selected from class A interleukins and their receptors, such as IL15/IL15R, IL2/IL2R, IL4/IL-4Rα+Rγ, IL-6/IL-6R , IL-11/ IL-11R, IL-13/ IL-13R1, IL-20/ IL20Rα+IL20Rβ, IL24/ IL20Rα+IL20Rβ.
在一些實施例中,所述配體及其受體選自D類白細胞介素及其受體,例如IL7/IL7R、IL21/ IL21R、IL23A/ IL12B。In some embodiments, the ligand and its receptor are selected from class D interleukins and their receptors, such as IL7/IL7R, IL21/IL21R, IL23A/IL12B.
在一些實施方式中,所述白細胞介素及其受體具有如下表2氨基酸序列:In some embodiments, the interleukin and its receptor have the following amino acid sequence in Table 2:
表2. 白細胞介素及其受體的氨基酸序列
在一些實施方式中,所述受體-配體的組合選自IL15與IL15Rα,在本發明「IL15Rα」和「IL15RA」可以互換。在一些實施方式中,所述IL15與IL15Rα具有如下表氨基酸序列:In some embodiments, the receptor-ligand combination is selected from IL15 and IL15Rα, and "IL15Rα" and "IL15RA" are interchangeable in this invention. In some embodiments, the IL15 and IL15Rα have the following amino acid sequences:
表3. IL15與IL15Rα的氨基酸序列
備註:表中,例如「IL-15Rαsushi(人,sushi domain氨基酸序列)-77a.a.」意指人IL-15Rα的sushi結構域中N末端開始第1至第77位氨基酸殘基的多肽片段,也標示為IL15Rαsushi-77a.a.,其它依此類推。Note: In the table, for example, "IL-15Rαsushi (human, sushi domain amino acid sequence)-77a.a." means the polypeptide fragment from the 1st to 77th amino acid residues starting from the N-terminus of the sushi domain of human IL-15Rα. , also labeled as IL15Rαsushi-77a.a., and so on for others.
在一些實施方式中,所述IL15和IL15Rα包含至少一個非天然的鏈間鍵,在一些實施方式中,所述非天然鏈間鍵為二硫鍵,所述IL15和/或所述IL15Rα至少包含一個氨基酸突變為半胱氨酸,在一些實施方式中,所述突變位於IL-15和IL15Rα的接觸界面上,在一些實施方式中,所述IL15的半胱氨酸突變選自E90C,所述IL15Rα的半胱氨酸突變選自P67C;在一些技術方案中,所述IL15半胱氨酸突變選自E93C,所述IL15Rα的半胱氨酸突變選自R35C。在一些實施方式中,所述IL15為SEQ ID NO.26的突變序列,所述突變包括E90C突變和/或E93C突變;在一些實施方式中,所述IL15Rα為SEQ ID NO.27、29、30或31的突變序列,所述突變包括P67C突變和/或R35C突變。In some embodiments, the IL15 and IL15Rα comprise at least one non-natural interchain bond. In some embodiments, the non-natural interchain bond is a disulfide bond, and the IL15 and/or the IL15Rα at least comprise One amino acid is mutated to cysteine. In some embodiments, the mutation is located at the contact interface between IL-15 and IL15Rα. In some embodiments, the cysteine mutation of IL15 is selected from E90C. The cysteine mutation of IL15Rα is selected from P67C; in some technical solutions, the IL15 cysteine mutation is selected from E93C, and the cysteine mutation of IL15Rα is selected from R35C. In some embodiments, the IL15 is the mutant sequence of SEQ ID NO.26, and the mutations include E90C mutation and/or E93C mutation; in some embodiments, the IL15Rα is SEQ ID NO.27, 29, 30 Or the mutation sequence of 31, the mutation includes P67C mutation and/or R35C mutation.
本發明中,所述IL15氨基酸殘基突變位置參照成熟形式人IL-15的氨基酸序列(SEQ ID NO.26)對應的自然順序編號,所述IL15Rα氨基酸殘基突變位置參照人IL-15Rα的sushi結構域(SEQ ID NO.27)對應的自然順序編號。In the present invention, the mutation position of the IL15 amino acid residues refers to the natural sequence number corresponding to the amino acid sequence of the mature form of human IL-15 (SEQ ID NO. 26), and the mutation position of the IL15Rα amino acid residues refers to the sushi of human IL-15Rα. The natural sequence number corresponding to the structural domain (SEQ ID NO. 27).
在一些實施方式中,前面任一所述IL15第61位的D突變為N,第64位的E突變為Q,和/或第65位的N突變位D。在一些實施方案中,所述IL15為SEQ ID NO.26的突變序列,所述突變包括選自D61N、E64Q和/或N65D突變。在一些實施方式中,所述IL15為SEQ ID NO.26的突變序列,所述突變包括E90C突變,還包括D61N、E64Q和/或N65D突變。In some embodiments, the D at position 61 of any of the aforementioned IL15 is mutated to N, the E at position 64 is mutated to Q, and/or the N at position 65 is mutated to D. In some embodiments, the IL15 is a mutant sequence of SEQ ID NO. 26, and the mutations include mutations selected from the group consisting of D61N, E64Q, and/or N65D. In some embodiments, the IL15 is a mutant sequence of SEQ ID NO. 26, and the mutations include E90C mutations, and also include D61N, E64Q and/or N65D mutations.
在一些實施方式中,前面任一所述IL15至少一個N糖基化位點不存在, 在一些實施方式中,所述N糖基化位點選自N71、N79和/或N112;在一些實施方式中,所述IL15包含以下氨基酸突變:N71Q、N79Q和/或N112Q。在一些實施方案中,所述IL15為SEQ ID NO.26的突變序列,所述突變包括選自N71Q、N79Q和/或N112Q突變。在一些實施方式中,所述IL15為SEQ ID NO.26的突變序列,所述突變包括E90C突變,還包括N71Q、N79Q和/或N112Q突變,和/或還包括N71Q、N79Q和/或N112Q突變。In some embodiments, at least one N-glycosylation site of any of the aforementioned IL15 is absent. In some embodiments, the N-glycosylation site is selected from N71, N79, and/or N112; in some embodiments, In this way, the IL15 contains the following amino acid mutations: N71Q, N79Q and/or N112Q. In some embodiments, the IL15 is a mutated sequence of SEQ ID NO. 26, including mutations selected from N71Q, N79Q and/or N112Q. In some embodiments, the IL15 is a mutant sequence of SEQ ID NO. 26, the mutations include E90C mutations, also include N71Q, N79Q and/or N112Q mutations, and/or also include N71Q, N79Q and/or N112Q mutations .
在一些實施方式中,前面任一所述IL15Rα至少一個O糖基化位點不存在;在一些實施方式中,所述O糖基化位點選自T2、T81和/或T86;在一些實施方式中,所述IL15Rα包含以下氨基酸突變:T2A、T81A和/或T86A。在一些實施方案中,所述IL15Rα為SEQ ID NO.27-31的突變序列,所述突變包括選自T2A、T81A和/或T86A的突變;在一些實施方案中,還包括P67C突變。In some embodiments, at least one O-glycosylation site of any of the aforementioned IL15Rα is absent; in some embodiments, the O-glycosylation site is selected from T2, T81 and/or T86; in some embodiments In this way, the IL15Rα contains the following amino acid mutations: T2A, T81A and/or T86A. In some embodiments, the IL15Rα is a mutant sequence of SEQ ID NO. 27-31, and the mutations include mutations selected from T2A, T81A, and/or T86A; in some embodiments, the P67C mutation is also included.
在一些實施方式中,所述IL15與IL15Rα的氨基酸序列如下表4:In some embodiments, the amino acid sequences of IL15 and IL15Rα are as follows in Table 4:
表4. IL15與IL15Rα突變的氨基酸序列
備註:所述IL15突變位置參照成熟形式人IL-15的氨基酸序列(SEQ ID NO.26)對應的自然順序編號,所述IL15Rα突變位置參照人IL-15Rα的sushi結構域(SEQ ID NO.27)對應的自然順序編號。Note: The IL15 mutation position refers to the natural sequence number corresponding to the amino acid sequence of the mature form of human IL-15 (SEQ ID NO. 26), and the IL15Rα mutation position refers to the sushi domain of human IL-15Rα (SEQ ID NO. 27 ) corresponds to the natural sequence number.
互相配合的受體(或其片段)以及配體(或其片段)的插入或替換位置可以位於,例如:受體或其片段插入或替換CL區,配體或其片段插入或替換CH1區;或受體或其片段插入或替換CH1區,配體或其片段插入或替換CL區。 ii. 抗原結合部分 The insertion or replacement position of the receptor (or its fragment) and the ligand (or its fragment) that cooperate with each other can be located at, for example: the receptor or its fragment is inserted into or replaced with the CL region, and the ligand or its fragment is inserted into or replaced with the CH1 region; Or the receptor or its fragment is inserted into or replaces the CH1 region, and the ligand or its fragment is inserted into or replaces the CL region. ii. Antigen binding part
本發明提供的雙特異性融合多肽,包含第一抗原結合部分和第二抗原結合部分,具有兩種抗原特異性,第一抗原結合部分與第二抗原結合部分是不同的,可以是第一抗原結合部分與第二抗原結合部分結合不同的抗原,也可以是第一抗原結合部分與第二抗原結合部分結合相同抗原的不同表位。The bispecific fusion polypeptide provided by the invention includes a first antigen-binding part and a second antigen-binding part, and has two antigen specificities. The first antigen-binding part and the second antigen-binding part are different and may be the first antigen. The binding portion and the second antigen-binding portion bind to different antigens, or the first antigen-binding portion and the second antigen-binding portion bind to different epitopes of the same antigen.
在一些實施方式中,所述雙特異性融合蛋白針對的靶標是腫瘤。在一些實施方式中,第一抗原結合部分與第二抗原結合部分結合的靶點都在腫瘤細胞表達;在一些實施方式中,第一抗原結合部分結合的靶點在腫瘤細胞,第二抗原結合部分結合的靶點在免疫細胞;在一些實施方式中,第一抗原結合部分與第二抗原結合部分結合的靶點都在免疫細胞。In some embodiments, the target of the bispecific fusion protein is a tumor. In some embodiments, the first antigen-binding portion and the second antigen-binding portion bind to targets expressed on tumor cells; in some embodiments, the first antigen-binding portion binds to a target on tumor cells, and the second antigen-binding portion The target site bound by the moiety is on immune cells; in some embodiments, the target sites bound by the first antigen-binding moiety and the second antigen-binding moiety are both on immune cells.
T細胞重定向殺傷是許多治療領域中理想的作用機制。在臨床前和臨床試驗中,各種雙特異性抗體形式參與T細胞重定向(May C等人(2012)Biochem Pharmacol,84(9)):1105年至1112年,第;弗蘭克爾SR,和Baeuerle PA,(2013)CURR OPIN化學生物學,第17卷(3):385-92頁)。所有T細胞重新靶向的雙特異性抗體或其片段已被工程化以具有至少兩個抗原結合位點,其中一個位點與靶細胞上的表面抗原結合另一個位點與T細胞表面抗原結合。在T細胞表面抗原中,源自TCR蛋白質複合物的人CD3的ε亞基最常被靶向作為重定向T細胞殺傷的靶標。Redirected killing of T cells is an ideal mechanism of action in many therapeutic areas. Various bispecific antibody formats have been implicated in T cell redirection in preclinical and clinical trials (May C et al (2012) Biochem Pharmacol, 84(9)):1105-1112, pp; Frankel SR, and Baeuerle PA, (2013) CURR OPIN Chemical Biology, Vol. 17(3): pp. 385-92). All T cell retargeting bispecific antibodies or fragments thereof have been engineered to have at least two antigen binding sites, one of which binds to a surface antigen on the target cell and another to which the T cell surface antigen binds . Among T cell surface antigens, the epsilon subunit of human CD3 derived from the TCR protein complex is most commonly targeted as a target for redirecting T cell killing.
可被靶向的腫瘤相關聯抗原包括但不限於:α-胎蛋白(AFP)、α-輔肌動蛋白-4、A3、對A33抗體有特異性的抗原、ART-4、B7、Ba 733、 BAGE、BrE3-抗原、CA125、CAMEL、CAP-1、碳酸酐酶IX、CASP-8/m、CCCL19、CCCL21、CD1、CD1a、CD2、CD3、CD4、CD5、CD8、CD11A、CD14、CD15、CD16、CD18、CD19、CD20、CD21、CD22、CD23、CD25、CD29、CD30、CD32b、CD33、CD37、CD38、CD40、CD40L、CD44、CD45、CD46、CD52、CD54、CD55、CD59、CD64、CD66a-e、CD67、CD70、CD70L、CD74、CD79a、CD80、CD83、CD95、CD126、CD132、CD133、CD138、CD147、CD154、CDC27、CDK-4/m、CDKN2A、CTLA-4、CXCR4、CXCR7、CXCL12、HIF-1α、結腸特異性抗原p(CSAp)、CEA(CEACAM5)、CEACAM6、c-Met、DAM、EGFR、EGFRvIII、EGP-1(TROP-2)、EGP-2、ELF2-M、Ep-CAM、成纖維細胞生長因子(FGF)、Flt-1、Flt-3、葉酸鹽受體、G250抗原、Claudin18.2、 GAGE、gp100、GRO-β、HLA-DR、HM1.24、人絨毛膜BCMA促性腺激素(HCG)和其亞基、HER2/neu、HMGB-1、缺氧誘導因子(HIF-1)、HSP70-2M、HST-2、Ia、IGF-1R、IFN-γ、IFN-α、IFN-β、IFN-λ、IL-4R、IL-6R、IL-13R、IL-15R、IL-17R、IL-18R、IL-2、IL-6、IL-8、IL-12、IL-15、IL-17、IL-18、IL-23、IL-25、胰島素樣生長因子-1(IGF-1)、KC4-抗原、KS-1-抗原、KS1-4、Le-Y、LDR/FUT、巨噬細胞遷移抑制因子(MIF)、MAGE、MAGE-3、MART-1、MART-2、NY-ESO-1、TRAG-3、mCRP、MCP-1、MIP-1A、MIP-1B、MIF、MUC1、MUC2、MUC3、MUC4、MUC5ac、MUC13、MUC16、MUM-1/2、MUM-3、NCA66、NCA95、NCA90、PAM4抗原、胰腺癌粘蛋白、PD-1受體、胎盤生長因子、p53、PLAGL2、前列腺酸性磷酸酶、PSA、PRAME、PSMA、PlGF、ILGF、ILGF-1R、IL-6、IL-25、RS5、RANTES、T101、SAGE、S100、存活素、存活素-2B、TAC、TAG-72、腱生蛋白、TRAIL 受體、TNF-α、Tn抗原、Thomson-Friedenreich抗原、腫瘤壞死抗原、VEGFR、ED-B纖連蛋白、WT-1、17-1A-抗原、補體因子C3、C3a、C3b、C5a、C5、血管生成標記物、bcl-2、bcl-6、Kras、致癌基因標 記物以及致癌基因產物(參見,例如Sensi等人,Clin Cancer Res 2006,12:5023-32;Parmiani等人,J Immunol 2007,178:1975-79;Novellino 等人Cancer Immunol Immunother2005,54:187-207)。Tumor-associated antigens that can be targeted include, but are not limited to: alpha-fetoprotein (AFP), alpha-actinin-4, A3, antigens specific for A33 antibodies, ART-4, B7, Ba 733 , BAGE, BrE3-antigen, CA125, CAMEL, CAP-1, carbonic anhydrase IX, CASP-8/m, CCCL19, CCCL21, CD1, CD1a, CD2, CD3, CD4, CD5, CD8, CD11A, CD14, CD15, CD16, CD18, CD19, CD20, CD21, CD22, CD23, CD25, CD29, CD30, CD32b, CD33, CD37, CD38, CD40, CD40L, CD44, CD45, CD46, CD52, CD54, CD55, CD59, CD64, CD66a- e, CD67, CD70, CD70L, CD74, CD79a, CD80, CD83, CD95, CD126, CD132, CD133, CD138, CD147, CD154, CDC27, CDK-4/m, CDKN2A, CTLA-4, CXCR4, CXCR7, CXCL12, HIF-1α, colon-specific antigen p (CSAp), CEA (CEACAM5), CEACAM6, c-Met, DAM, EGFR, EGFRvIII, EGP-1 (TROP-2), EGP-2, ELF2-M, Ep-CAM , fibroblast growth factor (FGF), Flt-1, Flt-3, folate receptor, G250 antigen, Claudin18.2, GAGE, gp100, GRO-β, HLA-DR, HM1.24, human chorion BCMA gonadotropin (HCG) and its subunits, HER2/neu, HMGB-1, hypoxia-inducible factor (HIF-1), HSP70-2M, HST-2, Ia, IGF-1R, IFN-γ, IFN- α, IFN-β, IFN-λ, IL-4R, IL-6R, IL-13R, IL-15R, IL-17R, IL-18R, IL-2, IL-6, IL-8, IL-12, IL-15, IL-17, IL-18, IL-23, IL-25, insulin-like growth factor-1 (IGF-1), KC4-antigen, KS-1-antigen, KS1-4, Le-Y, LDR/FUT, macrophage migration inhibitory factor (MIF), MAGE, MAGE-3, MART-1, MART-2, NY-ESO-1, TRAG-3, mCRP, MCP-1, MIP-1A, MIP- 1B, MIF, MUC1, MUC2, MUC3, MUC4, MUC5ac, MUC13, MUC16, MUM-1/2, MUM-3, NCA66, NCA95, NCA90, PAM4 antigen, pancreatic cancer mucin, PD-1 receptor, placental growth Factor, p53, PLAGL2, prostatic acid phosphatase, PSA, PRAME, PSMA, PlGF, ILGF, ILGF-1R, IL-6, IL-25, RS5, RANTES, T101, SAGE, S100, survivin, survivin-2B , TAC, TAG-72, tenascin, TRAIL receptor, TNF-α, Tn antigen, Thomson-Friedenreich antigen, tumor necrosis antigen, VEGFR, ED-B fibronectin, WT-1, 17-1A-antigen, Complement factors C3, C3a, C3b, C5a, C5, angiogenic markers, bcl-2, bcl-6, Kras, oncogene markers, and oncogene products (see, e.g., Sensi et al., Clin Cancer Res 2006, 12: 5023-32; Parmiani et al. J Immunol 2007, 178: 1975-79; Novellino et al. Cancer Immunol Immunother 2005, 54: 187-207).
雖然對於效應T細胞具有特異性的抗體或其它結合分子優選地結合至CD3抗原,但是在效應T細胞上表達的其它抗原是已知的並且可由T-細胞重定向複合物靶向。示例性T-細胞抗原包括但不限於,CD2、CD3、CD4、CD5、CD6、CD8、CD25、CD28、CD30、CD40、CD40L、CD44、CD45、CD69和CD90。Although antibodies or other binding molecules specific for effector T cells preferably bind to the CD3 antigen, other antigens expressed on effector T cells are known and can be targeted by T-cell redirecting complexes. Exemplary T-cell antigens include, but are not limited to, CD2, CD3, CD4, CD5, CD6, CD8, CD25, CD28, CD30, CD40, CD40L, CD44, CD45, CD69, and CD90.
免疫檢查點是免疫系統中的抑制途徑,其對維持自身耐受性和調節外周組織中生理性免疫應答的持續時間和幅度以使附帶組織損傷最小化至關重要。在一些實施方式中,第一抗原結合部分與第二抗原結合部分結合的靶點均為免疫檢查點或其配體,所述免疫檢查點分子包括但不限於:TIGIT、PD-1、TIM-3、LAG3、GTLA4、BTLA、BTN1A1、VISTA、LAIR、CD96、PVRIG、LILRA3、LILRA4、LILRB1、LILRB2、LILRB3、LLRB4、NKG-2A、CD47、CD200R1、CD300、Dectin-1、ICOS、NKp30、CD28、CD28H、CRTAM、DNAM-1、4-1-BB、BAFF、CD27、CD30、CD40、DR3、GITR、HVEM、LIGHT、OX40、TACI、2B4、CD2、CD48、CD229、SLAM、SLAMF5、GRAAC、TIM1、TIM4、CD7、DPPIV。Immune checkpoints are inhibitory pathways in the immune system that are critical for maintaining self-tolerance and regulating the duration and amplitude of physiological immune responses in peripheral tissues to minimize collateral tissue damage. In some embodiments, the targets to which the first antigen-binding portion and the second antigen-binding portion bind are immune checkpoints or their ligands. The immune checkpoint molecules include but are not limited to: TIGIT, PD-1, TIM- 3. LAG3, GTLA4, BTLA, BTN1A1, VISTA, LAIR, CD96, PVRIG, LILRA3, LILRA4, LILRB1, LILRB2, LILRB3, LLRB4, NKG-2A, CD47, CD200R1, CD300, Dectin-1, ICOS, NKp30, CD28, CD28H, CRTAM, DNAM-1, 4-1-BB, BAFF, CD27, CD30, CD40, DR3, GITR, HVEM, LIGHT, OX40, TACI, 2B4, CD2, CD48, CD229, SLAM, SLAMF5, GRAAC, TIM1, TIM4, CD7, DPPIV.
在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為PD-L1;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為TIGIT;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為GTLA4;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為LAG3;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為TIM-3;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為CD47;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為GTLA4;在一些實施方式中,第一抗原結合部分結合的靶點為PD-1,第二抗原結合部分結合的靶點為4-1-BB;在一些實施方式中,第一抗原結合部分結合的靶點為PD-L1,第二抗原結合部分結合的靶點為4-1-BB;在一些實施方式中,第一抗原合部分結合的靶點為PD-L1,第二抗原結合部分結合的靶點為TIGIT。In some embodiments, the target point bound by the first antigen-binding portion is PD-1, and the target point bound by the second antigen-binding portion is PD-L1; in some embodiments, the target point bound by the first antigen-binding portion is PD-1, the target that the second antigen-binding portion binds is TIGIT; in some embodiments, the target that the first antigen-binding portion binds is PD-1, and the target that the second antigen-binding portion binds is GTLA4; in some In embodiments, the target point bound by the first antigen-binding portion is PD-1, and the target point bound by the second antigen-binding portion is LAG3; in some embodiments, the target point bound by the first antigen-binding portion is PD-1, The target that the second antigen-binding portion binds is TIM-3; in some embodiments, the target that the first antigen-binding portion binds is PD-1, and the target that the second antigen-binding portion binds is CD47; in some embodiments, In, the target point bound by the first antigen-binding portion is PD-1, and the target point bound by the second antigen-binding portion is GTLA4; in some embodiments, the target point bound by the first antigen-binding portion is PD-1, and the target point bound by the second antigen-binding portion is PD-1, and the target point bound by the second antigen-binding portion is GTLA4. The target point bound by the antigen-binding portion is 4-1-BB; in some embodiments, the target point bound by the first antigen-binding portion is PD-L1, and the target point bound by the second antigen-binding portion is 4-1-BB; In some embodiments, the first antigen-binding portion binds to a target point that is PD-L1, and the second antigen-binding portion binds to a target point that is TIGIT.
在一些實施方式中,第一抗原結合部分靶向腫瘤相關抗原,第二抗原結合部分靶向免疫檢查點。在一些實施方式中,第一抗原結合部分靶向HER2,第二抗原結合部分靶向PD-1;在一些實施方式中,第一抗原結合部分靶向VEGF,第二抗原結合部分靶向PD-L1;在一些實施方式中,第一抗原結合部分靶向Claudin18.2,第二抗原結合部分靶向PD-L1;在一些實施方式中,第一抗原結合部分靶向HER2,第二抗原結合部分靶向CTLA-4;在一些實施方式中,第一抗原結合部分靶向CD20,第二抗原結合部分靶向CD47;在一些實施方式中,第一抗原結合部分靶向HER2,第二抗原結合部分靶向CD47。In some embodiments, the first antigen-binding moiety targets a tumor-associated antigen and the second antigen-binding moiety targets an immune checkpoint. In some embodiments, the first antigen-binding moiety targets HER2 and the second antigen-binding moiety targets PD-1; in some embodiments, the first antigen-binding moiety targets VEGF and the second antigen-binding moiety targets PD-1 L1; in some embodiments, the first antigen-binding moiety targets Claudin18.2, and the second antigen-binding moiety targets PD-L1; in some embodiments, the first antigen-binding moiety targets HER2, and the second antigen-binding moiety targets HER2 Targets CTLA-4; in some embodiments, the first antigen binding moiety targets CD20 and the second antigen binding moiety targets CD47; in some embodiments, the first antigen binding moiety targets HER2 and the second antigen binding moiety targets Targeting CD47.
在一些實施方式中,第一抗原結合部分和第二抗原結合部分同時靶向腫瘤異質性。用於腫瘤的示例性共同靶標包括但不限於HGF和VEGF,IGF-1R和VEGF,Her2和VEGF,CD19和CD3,CD20和CD3,Her2和CD3,CD19和FcγRIIIa,CD20和FcγRIIIa,Her2和FcγRIIIa。本發明的雙特異性融合多肽能夠結合VEGF和磷脂酰絲氨酸;VEGF和ErbB3;VEGF和PLGF;VEGF和ROBO4;VEGF和BSG2;VEGF和CDCP1;VEGF和ANPEP;VEGF和c-MET;HER-2和ERB3;HER-2和BSG2;HER-2和CDCP1;HER-2和ANPEP;EGFR和CD64;EGFR和BSG2;EGFR和CDCP1;EGFR和ANPEP;IGF1R和PDGFR;IGF1R和VEGF;IGF1R和CD20;CD20和CD74;CD20和CD30;CD20和DR4;CD20和VEGFR2;CD20和CD52;CD20和CD4;HGF和c-MET;HGF和NRP1;HGF和磷脂酰絲氨酸;ErbB3和IGF1R;ErbB3和IGF1,2;c-Met和Her-2;c-Met和NRP1;c-Met和IGF1R;IGF1,2和PDGFR;IGF1,2和CD20;IGF1,2和IGF1R;IGF2和EGFR;IGF2和HER2;IGF2和CD20;IGF2和VEGF;IGF2和IGF1R;IGF1和IGF2;PDGFRa和VEGFR2;PDGFRa和PLGF;PDGFRa和VEGF;PDGFRa和c-Met;PDGFRa和EGFR;PDGFRb和VEGFR2;PDGFRb和c-Met;PDGFRb和EGFR;RON和c-Met;RON和MTSP1;RON和MSP;RON和CDCP1;VGFR1和PLGF;VGFR1和RON;VGFR1和EGFR;VEGFR2和PLGF;VEGFR2和NRP1;VEGFR2和RON;VEGFR2和DLL4;VEGFR2和EGFR;VEGFR2和ROBO4;VEGFR2和CD55;LPA和S1P;EPHB2和RON;CTLA4和VEGF;CD3和EPCAM;CD40和IL6;CD40和IGF;CD40和CD56;CD40和CD70;CD40和VEGFR1;CD40和DR5;CD40和DR4;CD40和APRIL;CD40和BCMA;CD40和RANKL;CD28和MAPG;CD80和CD40;CD80和CD30;CD80和CD33;CD80和CD74;CD80和CD2;CD80和CD3;CD80和CD19;CD80和CD4;CD80和CD52;CD80和VEGF;CD80和DR5;CD80和VEGFR2;CD22和CD20;CD22和CD80;CD22和CD40;CD22和CD23;CD22和CD33;CD22和CD74;CD22和CD19;CD22和DR5;CD22和DR4;CD22和VEGF;CD22和CD52;CD30和CD20;CD30和CD22;CD30和CD23;CD30和CD40;CD30和VEGF;CD30和CD74;CD30和CD19;CD30和DR5;CD30和DR4;CD30和VEGFR2;CD30和CD52;CD30和CD4;CD138和RANKL;CD33和FTL3;CD33和VEGF;CD33和VEGFR2;CD33和CD44;CD33和DR4;CD33和DR5;DR4和CD137;DR4和IGF1,2;DR4和IGF1R;DR4和DR5;DR5和CD40;DR5和CD137;DR5和CD20;DR5和EGFR;DR5和IGF1,2;DR5和IGFR;DR5和HER-2;以及EGFR和DLL4。其他靶標組合包括EGF/erb-2/erb-3家族的一個或多個成員。In some embodiments, the first antigen binding moiety and the second antigen binding moiety simultaneously target tumor heterogeneity. Exemplary common targets for tumors include, but are not limited to, HGF and VEGF, IGF-IR and VEGF, Her2 and VEGF, CD19 and CD3, CD20 and CD3, Her2 and CD3, CD19 and FcγRIIIa, CD20 and FcγRIIIa, Her2 and FcγRIIIa. The bispecific fusion polypeptide of the present invention can bind to VEGF and phosphatidylserine; VEGF and ErbB3; VEGF and PLGF; VEGF and ROBO4; VEGF and BSG2; VEGF and CDCP1; VEGF and ANPEP; VEGF and c-MET; HER-2 and ERB3; HER-2 and BSG2; HER-2 and CDCP1; HER-2 and ANPEP; EGFR and CD64; EGFR and BSG2; EGFR and CDCP1; EGFR and ANPEP; IGF1R and PDGFR; IGF1R and VEGF; IGF1R and CD20; CD20 and CD74; CD20 and CD30; CD20 and DR4; CD20 and VEGFR2; CD20 and CD52; CD20 and CD4; HGF and c-MET; HGF and NRP1; HGF and phosphatidylserine; ErbB3 and IGF1R; ErbB3 and IGF1,2; c- Met and Her-2; c-Met and NRP1; c-Met and IGF1R; IGF1,2 and PDGFR; IGF1,2 and CD20; IGF1,2 and IGF1R; IGF2 and EGFR; IGF2 and HER2; IGF2 and CD20; IGF2 and VEGF; IGF2 and IGF1R; IGF1 and IGF2; PDGFRa and VEGFR2; PDGFRa and PLGF; PDGFRa and VEGF; PDGFRa and c-Met; PDGFRa and EGFR; PDGFRb and VEGFR2; PDGFRb and c-Met; PDGFRb and EGFR; RON and c- Met; RON and MTSP1; RON and MSP; RON and CDCP1; VGFR1 and PLGF; VGFR1 and RON; VGFR1 and EGFR; VEGFR2 and PLGF; VEGFR2 and NRP1; VEGFR2 and RON; VEGFR2 and DLL4; VEGFR2 and EGFR; VEGFR2 and ROBO4; VEGFR2 and CD55; LPA and S1P; EPHB2 and RON; CTLA4 and VEGF; CD3 and EPCAM; CD40 and IL6; CD40 and IGF; CD40 and CD56; CD40 and CD70; CD40 and VEGFR1; CD40 and DR5; CD40 and DR4; CD40 and APRIL; CD40 and BCMA; CD40 and RANKL; CD28 and MAPG; CD80 and CD40; CD80 and CD30; CD80 and CD33; CD80 and CD74; CD80 and CD2; CD80 and CD3; CD80 and CD19; CD80 and CD4; CD80 and CD52; CD80 and VEGF; CD80 and DR5; CD80 and VEGFR2; CD22 and CD20; CD22 and CD80; CD22 and CD40; CD22 and CD23; CD22 and CD33; CD22 and CD74; CD22 and CD19; CD22 and DR5; CD22 and DR4; CD22 and VEGF; CD22 and CD52; CD30 and CD20; CD30 and CD22; CD30 and CD23; CD30 and CD40; CD30 and VEGF; CD30 and CD74; CD30 and CD19; CD30 and DR5; CD30 and DR4; CD30 and VEGFR2; CD30 and CD52; CD30 and CD4; CD138 and RANKL; CD33 and FTL3; CD33 and VEGF; CD33 and VEGFR2; CD33 and CD44; CD33 and DR4; CD33 and DR5; DR4 and CD137; DR4 and IGF1,2; DR4 and IGF1R; DR4 and DR5; DR5 and CD40; DR5 and CD137; DR5 and CD20; DR5 and EGFR; DR5 and IGF1,2; DR5 and IGFR; DR5 and HER-2; and EGFR and DLL4. Other target combinations include one or more members of the EGF/erb-2/erb-3 family.
此外,用於自身免疫病症和炎性病症的示例性共同靶標包括但不限於IL-1和TNFα,IL-6和TNFα,IL-6和IL-1,IgE和IL-13,IL-1和IL-13,IL-4和IL-13,IL-5和IL-13,IL-9和IL-13,CD19和FcγRIIb,以及CD79和FcγRIIb。Additionally, exemplary common targets for autoimmune and inflammatory disorders include, but are not limited to, IL-1 and TNFα, IL-6 and TNFα, IL-6 and IL-1, IgE and IL-13, IL-1 and IL-13, IL-4 and IL-13, IL-5 and IL-13, IL-9 and IL-13, CD19 and FcγRIIb, and CD79 and FcγRIIb.
用於治療炎性疾病的示例性靶點包括但不限於:TNF和IL-17A;TNF和RANKL;TNF和VEGF;TNF和SOST;TNF和DKK;TNF和αVβ3;TNF和NGF;TNF和IL-23p19;TNF和IL-6;TNF和SOST;TNF和IL-6R;TNF和CD-20;IgE和IL-13;IL-13和IL23p19;IgE和IL-4;IgE和IL-9;IgE和IL-9;IgE和IL-13;IL-13和IL-9;IL-13和IL-4;IL-13和IL-9;IL-13和IL-9;IL-13和IL-4;IL-13和IL-23p19;IL-13和IL-9;IL-6R和VEGF;IL-6R和IL-17A;IL-6R和RANKL;IL-17A和IL-1β;IL-1β和RANKL;IL-1β和VEGF;RANKL和CD-20;IL-1α和IL-1β;IL-1α和IL-1β。Exemplary targets for treating inflammatory diseases include, but are not limited to: TNF and IL-17A; TNF and RANKL; TNF and VEGF; TNF and SOST; TNF and DKK; TNF and αVβ3; TNF and NGF; TNF and IL- 23p19; TNF and IL-6; TNF and SOST; TNF and IL-6R; TNF and CD-20; IgE and IL-13; IL-13 and IL23p19; IgE and IL-4; IgE and IL-9; IgE and IL-9; IgE and IL-13; IL-13 and IL-9; IL-13 and IL-4; IL-13 and IL-9; IL-13 and IL-9; IL-13 and IL-4; IL-13 and IL-23p19; IL-13 and IL-9; IL-6R and VEGF; IL-6R and IL-17A; IL-6R and RANKL; IL-17A and IL-1β; IL-1β and RANKL; IL-1β and VEGF; RANKL and CD-20; IL-1α and IL-1β; IL-1α and IL-1β.
參與類風濕性關節炎(RA)的靶點包括但不限於:TNF和IL-18;TNF和IL-12;TNF和IL-23;TNF和IL-1β;TNF和MIF;TNF和IL-17;和TNF和IL-15。Targets involved in rheumatoid arthritis (RA) include, but are not limited to: TNF and IL-18; TNF and IL-12; TNF and IL-23; TNF and IL-1β; TNF and MIF; TNF and IL-17 ; and TNF and IL-15.
治療系統性紅斑狼瘡(SLE)的靶點包括但不限於:CD20、CD22、CD19、CD28、CD4、CD24、CD37、CD38、CD40、CD69、CD72、CD74、CD79A、CD79B、CD80、CD81、CD83、CD86、IL-4、IL-6、IL10、IL2、IL4、IL11、TNFRSF5、TNFRSF6、TNFRSF8、C5、TNFRSF7、TNFSF5、TNFSF6、TNFSF7、BLR1、HDAC4、HDAC5、HDAC7A、HDAC9、ICOSL、IGBP1、MS4A1、RGSI、SLA2、IFNB1、AICDA、BLNK、GALNAC4S-6ST、INHA、INHBA、KLF6、DPP4、FCER2、R2、ILIR2、ITGA2、ITGA3、MS4A1、ST6GALI、CDIC、CHSTIO、HLA-A、HLA-DRA、NT5E、CTLA4、B7.1、B7.2、BlyS、BAFF、IFN-α和TNF-α。Targets for treating systemic lupus erythematosus (SLE) include, but are not limited to: CD20, CD22, CD19, CD28, CD4, CD24, CD37, CD38, CD40, CD69, CD72, CD74, CD79A, CD79B, CD80, CD81, CD83, CD86, IL-4, IL-6, IL10, IL2, IL4, IL11, TNFRSF5, TNFRSF6, TNFRSF8, C5, TNFRSF7, TNFSF5, TNFSF6, TNFSF7, BLR1, HDAC4, HDAC5, HDAC7A, HDAC9, ICOSL, IGBP1, MS4A1, RGSI, SLA2, IFNB1, AICDA, BLNK, GALNAC4S-6ST, INHA, INHBA, KLF6, DPP4, FCER2, R2, ILIR2, ITGA2, ITGA3, MS4A1, ST6GALI, CDIC, CHSTIO, HLA-A, HLA-DRA, NT5E, CTLA4, B7.1, B7.2, BlyS, BAFF, IFN-α and TNF-α.
用於治療多發性硬化症(MS)靶點,包括但不限於:IL-12、TWEAK、IL-23、CXCL13、CD40、CD40L、IL-18、VEGF、VLA-4、TNF、CD45RB、CD200、IFNγ、GM-CSF、FGF、C5、CD52和CCR2。Targets used to treat multiple sclerosis (MS), including but not limited to: IL-12, TWEAK, IL-23, CXCL13, CD40, CD40L, IL-18, VEGF, VLA-4, TNF, CD45RB, CD200, IFNγ, GM-CSF, FGF, C5, CD52 and CCR2.
用於治療膿毒症的靶點包括但不限於:TNF、IL-1、MIF、IL-6、IL-8、IL-18、IL-12、IL-10、IL-23、FasL、LPS、Toll-樣受體、TLR-4、組織因子,MIP-2、ADORA2A、IL-1B、CASP1、CASP4、NFκB1、PROC、TNFRSFIA、CSF3、CCR3、ILIRN、MIF、NFκB1、PTAFR、 TLR2、TLR4、GPR44、HMOX1、中期因子、IRAK1、NFκB2、SERPINA1、SERPINE1、和TREM1。Targets used to treat sepsis include, but are not limited to: TNF, IL-1, MIF, IL-6, IL-8, IL-18, IL-12, IL-10, IL-23, FasL, LPS, Toll-like receptors, TLR-4, tissue factor, MIP-2, ADORA2A, IL-1B, CASP1, CASP4, NFκB1, PROC, TNFRSFIA, CSF3, CCR3, ILIRN, MIF, NFκB1, PTAFR, TLR2, TLR4, GPR44 , HMOX1, midkine, IRAK1, NFκB2, SERPINA1, SERPINE1, and TREM1.
為了形成本發明的雙特異性融合蛋白,可以製備針對這些抗原的任意組合的抗體;即,這些抗原中的每一個可以任選地和獨立地被根據本發明的多特異性抗體包括或不包括。To form a bispecific fusion protein of the invention, antibodies may be prepared against any combination of these antigens; i.e., each of these antigens may optionally and independently be included or excluded by the multispecific antibody according to the invention .
在一些實施方式中,第一抗原結合部分和第二抗原結合部分靶向同一抗原的不同表位。In some embodiments, the first antigen binding moiety and the second antigen binding moiety target different epitopes of the same antigen.
在一些實施方式中,至少一個兩個抗原結合片段還可以包括分泌信號序列。In some embodiments, at least one of the two antigen-binding fragments may also include a secretion signal sequence.
分泌信號序列是指,通過連接至編碼序列位於細胞膜外側或細胞外側的N端而誘導所表達的蛋白或肽的分泌的序列,所述信號序列可以是由約18-30個氨基酸組成的肽序列。所有能轉運到細胞膜外側的蛋白有不同的信號序列,所述信號序列被細胞膜上的信號肽酶切割。通常,對於並非宿主細胞天然表達的外來蛋白而言,可以採用能將該蛋白分泌到細胞週質或培養基中的分泌信號序列,或採用修飾的序列。The secretion signal sequence refers to a sequence that induces the secretion of the expressed protein or peptide by being connected to the N-terminus of the coding sequence located outside the cell membrane or outside the cell. The signal sequence can be a peptide sequence composed of about 18-30 amino acids. . All proteins that can be transported to the outside of the cell membrane have different signal sequences that are cleaved by signal peptidases on the cell membrane. Generally, for foreign proteins that are not naturally expressed by the host cell, a secretion signal sequence capable of secreting the protein into the periplasm or culture medium, or a modified sequence, may be used.
在一些實施方式中,所VH1和VL1配合形成特異性結合TIGIT的抗原結合位點,所VH2和VL2配合形成特異性結合PD-L1的抗原結合位點。在一些實施方式中,所VH1和VL1配合形成特異性結合PD-L1的抗原結合位點,所VH2和VL2配合形成特異性結合TIGIT的抗原結合位點。在一些實施方式中,所述結合TIGIT的抗原結合部分包括重鏈可變區和輕鏈可變區,其中重鏈可變區包括SEQ ID NO.73或與其具有至少80%(例如至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%)序列同一性的序列,輕鏈可變區包括SEQ ID NO.74或與其具有至少80%(例如至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%)序列同一性的序列。在一些實施方式中,其中所述結合TIGIT的抗原結合部分的重鏈可變區包括HCDR1、HCDR2和HCDR3區,所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.73中的HCDR1、HCDR2和HCDR3,在一些實施方式中,其中所述輕鏈可變區包括LCDR1、LCDR2和LCDR3區,所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.74中的LCDR1、LCDR2和LCDR3;在一些實施方案中,所述HCDR1、HCDR2、HCDR3、LCDR1、LCDR2和LCDR3由IMGT編號系統定義,或由Kabat編號系統定義,或由Chothia 編號系統定義,或由Contact編號系統定義,或由AbM編號系統定義。在一些實施方式中,所述結合PD-L1的抗原結合部分包括重鏈可變區和輕鏈可變區,其中所述重鏈可變區包括SEQ ID NO.36或與其具有至少80%序列同一性的序列,輕鏈可變區包括SEQ ID NO.37或與其具有至少80%序列同一性的序列;在一些實施方式中,所述結合PD-L1的抗原結合部分包括重鏈可變區和輕鏈可變區,其中所述重鏈可變區包括SEQ ID NO.71或與其具有至少80%序列同一性的序列,輕鏈可變區包括SEQ ID NO.72或與其具有至少80%序列同一性的序列;在一些實施方式中,所述結合PD-L1的抗原結合部分包括重鏈可變區和輕鏈可變區,其中所述重鏈可變區包括SEQ ID NO.75或與其具有至少80%序列同一性的序列,輕鏈可變區包括SEQ ID NO.76或與其具有至少80%序列同一性的序列;所述具有至少80%序列同一性的序列,可以是例如具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%序列同一性的序列。在一些實施方式中,所述結合PD-L1的抗原結合部分的重鏈可變區包括HCDR1、HCDR2和HCDR3區,輕鏈可變區包括LCDR1、LCDR2和LCDR3區,其中:1)所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.36中的HCDR1、HCDR2和HCDR3,所述所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.37中的LCDR1、LCDR2和LCDR3;2)所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.71中的HCDR1、HCDR2和HCDR3,所述所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.72中的LCDR1、LCDR2和LCDR3;或者3)所述HCDR1、HCDR2和HCDR3分別包括SEQ ID NO.75中的HCDR1、HCDR2和HCDR3,所述所述LCDR1、LCDR2和LCDR3分別包括SEQ ID NO.76中的LCDR1、LCDR2和LCDR3。在一些實施方案中,所述HCDR1、HCDR2、HCDR3、LCDR1、LCDR2和LCDR3由IMGT編號系統定義,或由Kabat編號系統定義,或由Chothia編號系統定義,或由Contact編號系統定義,或由AbM編號系統定義。 iii. 異二聚體 Fc 融合蛋白 In some embodiments, VH1 and VL1 cooperate to form an antigen-binding site that specifically binds TIGIT, and VH2 and VL2 cooperate to form an antigen-binding site that specifically binds PD-L1. In some embodiments, VH1 and VL1 cooperate to form an antigen-binding site that specifically binds PD-L1, and VH2 and VL2 cooperate to form an antigen-binding site that specifically binds TIGIT. In some embodiments, the TIGIT-binding antigen-binding portion includes a heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes or is at least 80% (eg, at least 80%) SEQ ID NO. , 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97 %, 98% or 99%) sequence identity, the light chain variable region includes SEQ ID NO. 74 or has at least 80% (e.g., at least 80%, 81%, 82%, 83%, 84%, 85) sequence identity with SEQ ID NO. %, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99%) sequence identity. In some embodiments, wherein the heavy chain variable region of the antigen-binding portion that binds TIGIT includes HCDR1, HCDR2, and HCDR3 regions, the HCDR1, HCDR2, and HCDR3 respectively include HCDR1, HCDR2, and HCDR3 in SEQ ID NO. 73 , in some embodiments, wherein the light chain variable region includes LCDR1, LCDR2 and LCDR3 regions, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO. 74; in some embodiments , the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the IMGT numbering system, or by the Kabat numbering system, or by the Chothia numbering system, or by the Contact numbering system, or by the AbM numbering system. In some embodiments, the antigen-binding portion that binds PD-L1 includes a heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes or has at least 80% the sequence of SEQ ID NO. 36 Identity sequence, the light chain variable region includes SEQ ID NO. 37 or a sequence with at least 80% sequence identity thereto; in some embodiments, the antigen-binding portion that binds PD-L1 includes the heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes SEQ ID NO. 71 or a sequence having at least 80% sequence identity thereto, and the light chain variable region includes SEQ ID NO. 72 or has at least 80% sequence identity thereto Sequences of sequence identity; in some embodiments, the antigen-binding portion that binds PD-L1 includes a heavy chain variable region and a light chain variable region, wherein the heavy chain variable region includes SEQ ID NO. 75 or The light chain variable region includes SEQ ID NO. 76 or a sequence having at least 80% sequence identity therewith; the sequence having at least 80% sequence identity may, for example, have At least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96 %, 97%, 98% or 99% sequence identity. In some embodiments, the heavy chain variable region of the antigen-binding portion that binds to PD-L1 includes HCDR1, HCDR2, and HCDR3 regions, and the light chain variable region includes LCDR1, LCDR2, and LCDR3 regions, wherein: 1) the HCDR1 , HCDR2 and HCDR3 respectively include HCDR1, HCDR2 and HCDR3 in SEQ ID NO.36, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO.37; 2) the HCDR1, HCDR2 and HCDR3 respectively include HCDR1, HCDR2 and HCDR3 in SEQ ID NO.71, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO.72; or 3) the HCDR1, HCDR2 and HCDR3 respectively includes HCDR1, HCDR2 and HCDR3 in SEQ ID NO.75, and the LCDR1, LCDR2 and LCDR3 respectively include LCDR1, LCDR2 and LCDR3 in SEQ ID NO.76. In some embodiments, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the IMGT numbering system, or by the Kabat numbering system, or by the Chothia numbering system, or by the Contact numbering system, or by AbM numbering System definition. iii. Heterodimeric Fc fusion protein
在一些實施方式中,其包含重鏈恆定區Fc,所述Fc恆定區是異源二聚體(異二聚體Fc融合蛋白)。In some embodiments, it comprises a heavy chain constant region Fc that is a heterodimer (heterodimeric Fc fusion protein).
所述Fc包括但不限於如下組合: CH2; CH2+CH3; CH2+CH3+CH4; 所述Fc恆定區引入突變以避免重鏈錯配。 The Fc includes but is not limited to the following combinations: CH2; CH2+CH3; CH2+CH3+CH4; Mutations were introduced into the Fc constant region to avoid heavy chain mismatches.
在一些實施方式中,所述Fc恆定區引入突變為基於KiH技術(Knob-into-Holes),即在其中Fc恆定區一條重鏈中引入氨基酸突變,引入的氨基酸體積大於最初氨基酸殘基體積,形成一個突起的類似「杵」的型結構(Knob),在Fc恆定區另一條鏈區引入另一突變,引入的氨基酸體積小於最初氨基酸殘基體積,形成一個凹陷,類似「臼」的結構(Hole),從而凸型重鏈更傾向和凹型重鏈配對,從而避免重鏈發生錯配。該技術由基因泰克研發,記載於專利申請WO1996027011中,該專利全文引入本發明。In some embodiments, the introduction of mutations in the Fc constant region is based on KiH technology (Knob-into-Holes), that is, amino acid mutations are introduced in a heavy chain of the Fc constant region, and the introduced amino acid volume is greater than the original amino acid residue volume, A protruding "pestle"-like structure (Knob) is formed, and another mutation is introduced in another chain region of the Fc constant region. The introduced amino acid volume is smaller than the original amino acid residue volume, forming a depression, similar to a "mortar" structure ( Hole), so that the convex heavy chain is more likely to pair with the concave heavy chain, thereby avoiding heavy chain mispairing. This technology was developed by Genentech and is documented in patent application WO1996027011, the full text of which is incorporated into the present invention.
在一些實施方式中,所述Fc恆定區引入突變為基於靜電相互作用,例如ART-lg技術,該技術由羅氏子公司Chugai開發,特異性的改變Fc恆定區結構域的電荷,促進異源重鏈的配對,相當於電荷版的KiH技術,該技術記載於專利申請WO2006106905中,該專利全文引入本發明。In some embodiments, the introduction of mutations in the Fc constant region is based on electrostatic interactions, such as ART-lg technology, which was developed by Chugai, a subsidiary of Roche, to specifically change the charge of the Fc constant region domain and promote heterologous recombination. The pairing of chains is equivalent to the charge version of KiH technology. This technology is recorded in patent application WO2006106905, the full text of which is incorporated into the present invention.
在一些實施方式中,所述Fc恆定區引入突變為基於SEED技術,SEED異二聚化是另一種基於空間突變的設計策略,該策略利用了從IgG和IgA CH3域(也稱為AG SEED CH3和GA SEED CH3)衍生的交替序列的互補性。IgG和IgA CH3衍生物產生互補序列,因此在組裝兩個互補的重鏈異源二聚體的同時,排除了缺乏互補性的同源二聚體的組裝。該技術記載於專利申請WO2007110205中,該專利全文引入本發明。In some embodiments, the Fc constant region introduces mutations based on SEED technology. SEED heterodimerization is another spatial mutation-based design strategy that utilizes SEED CH3 domains from IgG and IgA (also known as AG SEED CH3 and GA SEED CH3)-derived complementarity of alternating sequences. IgG and IgA CH3 derivatives generate complementary sequences, thus precluding the assembly of homodimers lacking complementarity while assembling two complementary heavy chain heterodimers. This technology is described in patent application WO2007110205, the entire text of which is incorporated into the present invention.
在一些實施方式中,所述Fc恆定區引入突變為基於等電點改變,便於提高異源二聚體形成率以及保持Fc區域穩定性的改造,該技術記載於 WO2014145806,該專利全文引入本專利。In some embodiments, the mutation introduced into the Fc constant region is based on changes in the isoelectric point, which facilitates the improvement of the heterodimer formation rate and the maintenance of the stability of the Fc region. This technology is recorded in WO2014145806, the full text of which is incorporated into this patent. .
在一些實施方式中,所述Fc恆定區基於親水相互作用或增加的柔性而締合成為異源二聚體。In some embodiments, the Fc constant regions associate as heterodimers based on hydrophilic interactions or increased flexibility.
在一些實施方式中,所述Fc恆定區基於以上技術的任意組合締合成為異源二聚體,例如,在一些實施方式中,所述Fc恆定區基於KIH和靜電相互作用的組合進行了突變。例如,XmAb雙特異性平台方法可以通過結合靜電相互作用,CH3域構象和氫鍵提高雙特異性抗體的熱穩定性。具體的,該策略將天然 IgG1的Fc側鏈突變交換為S364K和K370S異二聚體,以在兩者之間形成氫鍵,然後進行L368D/K370S取代驅動鹽橋相互作用以促進異二聚體的形成,專利申請WO2014145907,該專利全文引入本專利。In some embodiments, the Fc constant region associates as a heterodimer based on any combination of the above techniques, for example, in some embodiments, the Fc constant region is mutated based on a combination of KIH and electrostatic interactions . For example, the XmAb bispecific platform approach can improve the thermal stability of bispecific antibodies by combining electrostatic interactions, CH3 domain conformation, and hydrogen bonding. Specifically, this strategy swaps the Fc side chain mutations of native IgG1 to S364K and K370S heterodimers to form hydrogen bonds between the two, and then performs L368D/K370S substitutions to drive salt bridge interactions to promote heterodimers Formation, patent application WO2014145907, the full text of which is incorporated into this patent.
在一些實施方式中,所述CH2、CH3或CH4區域的全長或部分被插入或替換成受體及其配體。In some embodiments, all or part of the CH2, CH3 or CH4 region is inserted or replaced with the receptor and its ligand.
在一些實施方式中,被插入或替換的區域獨立地位於CH2、CH3或CH4區,或任意像個相鄰的區之間的位置(如CH1-CH2交界處、CH2-CH3交界處、CH3-CH4交界處);In some embodiments, the inserted or replaced region is located independently in the CH2, CH3 or CH4 region, or at any position between adjacent regions (such as the CH1-CH2 junction, CH2-CH3 junction, CH3- CH4 junction);
在一些實施方式中,當上述任意兩個恆定區(例如CL-CH1、CH2-CH2、CH3-CH3或CH4-CH4區之任一項)被插入或替換時,替換區域兩個互相配合的綴合片段之間的親和力,KD<1×10 -3(M),例如如x×10 -4(M)、x×10 -5(M)、x×10 -6(M)、x×10 -7(M)、x×10 -8(M)、x×10 -9(M)、x×10 -10(M)、x×10 -11(M);x的值可選自1~9,例如1、2、3、4、5、6、7、8或9。 In some embodiments, when any two of the above constant regions (such as any one of the CL-CH1, CH2-CH2, CH3-CH3 or CH4-CH4 regions) are inserted or replaced, the two matching suffixes of the replacement regions are The affinity between the combined fragments, KD <1×10 -3 (M), for example, x×10 -4 (M), x×10 -5 (M), x×10 -6 (M), x×10 -7 (M), x×10 -8 (M), x×10 -9 (M), x×10 -10 (M), x×10 -11 (M); the value of x can be from 1 to 9, such as 1, 2, 3, 4, 5, 6, 7, 8 or 9.
在一些實施方式中,所述綴合片段的N端和/或C端通過連接肽與所述抗原結合片段連接。In some embodiments, the N-terminus and/or C-terminus of the conjugated fragment is linked to the antigen-binding fragment through a linking peptide.
術語“可操作連接”是指部件(例如兩條多肽)直接地或經由一個或多個連接子(連接肽)通過共價鍵連接。The term "operably linked" means that parts (eg, two polypeptides) are joined by a covalent bond, either directly or via one or more linkers (linking peptides).
在一些實施方式中,所述連接肽的氨基酸數目為1~30個;可以是1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個;優選5~20個。In some embodiments, the number of amino acids of the connecting peptide is 1 to 30; it can be 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 , 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30; preferably 5 to 20.
在一些實施方式中,所述連接肽的氨基酸是不具有除連接以外的額外功能(例如蛋白定位、酶切位點等)的無意義多肽。In some embodiments, the amino acids of the connecting peptide are meaningless polypeptides that do not have additional functions other than connecting (such as protein localization, enzyme cleavage sites, etc.).
在一些實施方式中,所述連接肽為柔性連接肽;In some embodiments, the linker peptide is a flexible linker peptide;
在一些實施方式中,所述連接肽的氨基酸序列選自Gly、Ser、Pro、Ala以及Glu中的一種或多種。In some embodiments, the amino acid sequence of the connecting peptide is selected from one or more of Gly, Ser, Pro, Ala and Glu.
在一些實施方式中,所述連接肽的氨基酸序列選自(GGGGS)n、(GGGS)n、(GGS)n、(GS)n或(G)n,其中n選自1,2,3,4,5或6。In some embodiments, the amino acid sequence of the connecting peptide is selected from (GGGGS)n, (GGGS)n, (GGS)n, (GS)n or (G)n, where n is selected from 1, 2, 3, 4, 5 or 6.
連接肽通常是柔性的,可以減少融合蛋白與目的蛋白之間的空間位阻,從而更有利於蛋白正確折疊。The linking peptide is usually flexible and can reduce the steric hindrance between the fusion protein and the target protein, which is more conducive to the correct folding of the protein.
在另外的實施方案中,連接肽是剛性接頭肽;即相對非柔性肽接頭。剛性連接肽不要求完全缺乏柔性,而是比柔性接頭肽如富甘氨酸肽接頭柔性少。由於其相對缺乏柔性,剛性連接肽降低通過剛性連接肽連接在一起的兩個蛋白結構域(在當前情況下是穩定劑蛋白和熱穩定逆轉錄酶)的運動。提供有序鏈(例如α螺旋結構)的連接肽可提供剛性接頭肽。例如,精氨酸、亮氨酸、谷氨酸、谷氨酰胺和甲硫氨酸都顯示出相對高的螺旋接頭結構傾向。然而,包含許多脯氨酸殘基的非螺旋接頭也可表現顯著的剛性。剛性連接肽的實例包括聚賴氨酸和聚-DL-丙氨酸聚賴氨酸。剛性肽接頭的進一步描述由Wriggers等,Biopolymers,80,第736-46頁(2005)提供。此外,剛性接頭肽在由George等,Protein Engineering,15,第871-79頁(2003)描述的接頭數據庫中描述。優選地,剛性連接肽也是非可切割接頭肽,即非可切割剛性連接肽。 分離的核酸 In additional embodiments, the linking peptide is a rigid linker peptide; that is, a relatively inflexible peptide linker. Rigid linker peptides do not require a complete lack of flexibility, but rather are less flexible than flexible linker peptides, such as glycine-rich peptide linkers. Due to their relative lack of flexibility, rigid linker peptides reduce the motion of two protein domains (in the present case, the stabilizer protein and the thermostable reverse transcriptase) linked together by the rigid linker peptide. Linking peptides that provide ordered chains (e.g., α-helical structures) can provide rigid linker peptides. For example, arginine, leucine, glutamate, glutamine, and methionine all show a relatively high propensity for helical linker structures. However, nonhelical linkers containing many proline residues can also exhibit significant rigidity. Examples of rigid linker peptides include polylysine and poly-DL-alanine polylysine. A further description of rigid peptide linkers is provided by Wriggers et al., Biopolymers, 80, pp. 736-46 (2005). Furthermore, rigid linker peptides are described in the linker database described by George et al., Protein Engineering, 15, pp. 871-79 (2003). Preferably, the rigid linker peptide is also a non-cleavable linker peptide, ie, a non-cleavable rigid linker peptide. isolated nucleic acid
本發明還涉及分離的核酸,其編碼如上所述的雙特異性融合多肽或多功能融合蛋白。The invention also relates to isolated nucleic acids encoding bispecific fusion polypeptides or multifunctional fusion proteins as described above.
術語“分離的核酸”在本文中是指以單鍊或雙鏈形式存在的脫氧核糖核酸或核糖核酸聚合物。所述分離的核酸包括RNA基因組序列,DNA(gDNA和cDNA)或從DNA轉錄的RNA序列,而且,除非特別指明,所述多肽還包括天然多核苷酸、糖、或鹼基改變的類似物。根據本發明一個方面,所述多核苷酸是輕鏈多核苷酸。The term "isolated nucleic acid" as used herein refers to a deoxyribonucleic acid or ribonucleic acid polymer present in single- or double-stranded form. The isolated nucleic acids include RNA genomic sequences, DNA (gDNA and cDNA) or RNA sequences transcribed from DNA, and, unless otherwise specified, the polypeptides also include natural polynucleotides, sugars, or base-altered analogs. According to one aspect of the invention, the polynucleotide is a light chain polynucleotide.
所述分離的核酸包括編碼蛋白複合物氨基酸序列的核苷酸序列,也包括與其互補的核苷酸序列。所述互補序列包括完全互補的序列和基本上互補的序列,這是指能在本領域已知的嚴謹條件下與編碼蛋白複合物氨基酸序列的核苷酸序列雜交的序列。The isolated nucleic acid includes a nucleotide sequence encoding the amino acid sequence of the protein complex, and also includes a nucleotide sequence complementary thereto. The complementary sequence includes a completely complementary sequence and a substantially complementary sequence, which refers to a sequence that hybridizes to the nucleotide sequence encoding the amino acid sequence of the protein complex under stringent conditions known in the art.
而且,編碼蛋白複合物氨基酸序列的核苷酸序列可以被改變或突變。所述改變包括添加、缺失、或非保守取代或保守取代。編碼蛋白複合物氨基酸序列的多核苷酸可以被解釋為,包括相對於該分離的核酸有實質性同一性的核苷酸序列。所述實質性同一性將該核苷酸序列與另外的隨機序列以使得它們最大對應的方式進行比對,當用本領域常見的算法分析所比對的序列時,所述序列可顯示大於80%的同源性,大於90%的同源性,或大於95%的同源性。 載體 Furthermore, the nucleotide sequence encoding the amino acid sequence of the protein complex may be altered or mutated. Such changes include additions, deletions, or non-conservative or conservative substitutions. A polynucleotide encoding an amino acid sequence of a protein complex may be construed as including a nucleotide sequence that is substantially identical to the isolated nucleic acid. The substantial identity is achieved by aligning the nucleotide sequence with another random sequence in a manner that maximizes correspondence between them. When the aligned sequences are analyzed using algorithms common in the art, the sequence may show greater than 80 % homology, greater than 90% homology, or greater than 95% homology. carrier
本發明還涉及含有如上所述核酸的載體。The invention also relates to vectors containing nucleic acids as described above.
術語「載體(vector)」是指,可將多聚核苷酸插入其中的一種核酸運載工具。當載體能使插入的多核苷酸編碼的蛋白獲得表達時,載體稱為表達載體。載體可以通過轉化,轉導或者轉染導入宿主細胞,使其攜帶的遺傳物質元件在宿主細胞中獲得表達。載體是本領域技術人員公知的,包括但不限於:質粒;噬菌粒;柯斯質粒;人工染色體,例如酵母人工染色體(YAC)、細菌人工染色體(BAC)或P1來源的人工染色體(PAC);噬菌體如λ噬菌體或M13噬菌體及動物病毒等。可用作載體的動物病毒包括但不限於,逆轉錄酶病毒(包括慢病毒)、腺病毒、腺相關病毒、皰疹病毒(如單純皰疹病毒)、痘病毒、桿狀病毒、乳頭瘤病毒、乳頭多瘤空泡病毒(如SV40)。所述載體可以包含選擇標記(例如便於富集的標籤,例如his tag;或便於被檢測的標籤,例如GFP),以及與所述克隆載體所指定的細胞類型相匹配的複制起點,而表達載體則包含對於影響指定靶細胞中的表達必要的調節元件例如增強子、啟動子、內部核醣體進入位點(IRES)和其他表達控制元件(例如轉錄終止信號,或者多腺苷酸化信號和多聚U序列等)。所述載體可以是克隆載體與表達載體。在表達或是製備抗體或片段時,常涉及原核表達載體和真核表達載體,原核表達載體常用PET系列、pGEX系列,真核表達載體常用pcDNA3.1、pcDNA3.4、pcDNA4、pEGFP-N1、pEGFP-N1、pSV2等。The term "vector" refers to a nucleic acid delivery vehicle into which a polynucleotide can be inserted. When the vector can express the protein encoded by the inserted polynucleotide, the vector is called an expression vector. The vector can be introduced into the host cell through transformation, transduction or transfection, so that the genetic material elements it carries can be expressed in the host cell. Vectors are well known to those skilled in the art, including but not limited to: plasmids; phagemids; cosmids; artificial chromosomes, such as yeast artificial chromosomes (YAC), bacterial artificial chromosomes (BAC) or P1-derived artificial chromosomes (PAC) ; Phages such as lambda phage or M13 phage and animal viruses, etc. Animal viruses that can be used as vectors include, but are not limited to, retroviruses (including lentiviruses), adenoviruses, adeno-associated viruses, herpesviruses (such as herpes simplex virus), poxviruses, baculoviruses, papillomaviruses , Papilloma vacuolating virus (such as SV40). The vector may contain a selectable marker (such as a tag that facilitates enrichment, such as his tag; or a tag that facilitates detection, such as GFP), and an origin of replication that matches the cell type specified by the cloning vector, and the expression vector then contain regulatory elements necessary to affect expression in a given target cell such as enhancers, promoters, internal ribosome entry sites (IRES), and other expression control elements (e.g., transcription termination signals, or polyadenylation signals and polymerization U sequence, etc.). The vectors may be cloning vectors and expression vectors. When expressing or preparing antibodies or fragments, prokaryotic expression vectors and eukaryotic expression vectors are often involved. Prokaryotic expression vectors commonly use PET series and pGEX series, and eukaryotic expression vectors commonly use pcDNA3.1, pcDNA3.4, pcDNA4, pEGFP-N1, pEGFP-N1, pSV2, etc.
在本發明中,載體可以為組合物,例如為多種質粒的混合物,不同質粒負載抗體或其片段的一部分。 宿主細胞 In the present invention, the vector can be a composition, for example, a mixture of multiple plasmids, with different plasmids carrying part of the antibody or fragment thereof. host cell
本發明還涉及含有如上所述核酸或者如上所述載體的宿主細胞。The invention also relates to host cells containing nucleic acids as described above or vectors as described above.
可以使用的多種培養的宿主細胞包括,例如,原核細胞、真核細胞、細菌細胞(如大腸桿菌或嗜熱脂肪芽胞桿菌(Bacillus stearothermophilus))、真菌細胞(如釀酒酵母或畢赤酵母)、昆蟲細胞(如包括草地夜蛾細胞在內的鱗翅目昆蟲細胞)或哺乳動物細胞(如中國倉鼠卵巢(CHO)細胞、NS0細胞、小倉鼠腎(BHK)細胞、猴腎細胞、Hela細胞、人肝細胞癌細胞或293細胞等等)。A variety of cultured host cells that can be used include, for example, prokaryotic cells, eukaryotic cells, bacterial cells (such as Escherichia coli or Bacillus stearothermophilus), fungal cells (such as Saccharomyces cerevisiae or Pichia pastoris), insect cells. Cells (such as lepidopteran cells including Spodoptera frugiperda cells) or mammalian cells (such as Chinese hamster ovary (CHO) cells, NS0 cells, baby hamster kidney (BHK) cells, monkey kidney cells, HeLa cells, human liver cells cancer cells or 293 cells etc.).
製備雙特異性融合多肽或多功能融合蛋白的方法Methods for preparing bispecific fusion polypeptides or multifunctional fusion proteins
可採用本領域任何已知的方法製備本發明的雙特異性融合多肽或多功能融合蛋白。Any method known in the art can be used to prepare the bispecific fusion polypeptide or multifunctional fusion protein of the present invention.
例如:用如上所述的載體轉化宿主細胞; 培養所轉化的宿主細胞;和 收集宿主細胞中表達的雙特異性融合多肽或多功能融合蛋白。 For example: transform host cells with vectors as described above; culturing the transformed host cells; and Collect bispecific fusion polypeptides or multifunctional fusion proteins expressed in host cells.
特別的,可採用如下方法。In particular, the following methods can be used.
早期構建雙特異性抗體的方法有化學交聯法或雜合雜交瘤或四價體瘤法(例如,Staerz UD等,Nature,314:628-31,1985;Milstein C等,Nature,305:537-540,1983;Karpovsky B等,J. Exp. Med.,160:1686-1701,1984)。化學偶聯法是將2個不同的單克隆抗體用化學偶聯的方式連接在一起,製備出雙特異性單克隆抗體。例如兩種不同單克隆抗體的化學結合,或例如兩個抗體片段如兩個Fab片段的化學結合。雜合—雜交瘤法是通過細胞雜交法或者三元雜交瘤的方式產生雙特異性單克隆抗體,這些細胞雜交瘤或者三元雜交瘤是通過建成的雜交瘤融合,或者建立的雜交瘤和從小鼠得到的淋巴細胞融合而得到的。雖然這些技術用於製造BiAb,但各種產生問題使得此類複合物難以使用,諸如產生含有抗原結合位點的不同組合的混合群體、蛋白質表現方面的困難、需要純化目標BiAb、低產率、生產費用高等。Early methods for constructing bispecific antibodies include chemical cross-linking methods or hybrid hybridoma or quadrivalent tumor methods (for example, Staerz UD et al., Nature, 314:628-31, 1985; Milstein C et al., Nature, 305:537 -540, 1983; Karpovsky B et al., J. Exp. Med., 160:1686-1701, 1984). The chemical coupling method is to link two different monoclonal antibodies together through chemical coupling to prepare bispecific monoclonal antibodies. For example the chemical conjugation of two different monoclonal antibodies, or for example the chemical conjugation of two antibody fragments such as two Fab fragments. Hybrid-Hybridoma method is to produce bispecific monoclonal antibodies through cell hybridization or ternary hybridoma. These cell hybridomas or ternary hybridomas are fused through the established hybridomas, or the established hybridomas are fused with each other from childhood. Obtained by fusion of lymphocytes obtained from mice. Although these techniques are used to make BiAbs, various production issues make such complexes difficult to use, such as the generation of mixed populations containing different combinations of antigen binding sites, difficulties with protein expression, the need to purify the target BiAb, low yields, and production costs. higher.
最近的方法利用經過基因工程改造的構建體,其能夠產生單一BiAb的均質產物而無需徹底純化以去除不需要的副產物。此類構建體包括串聯scFv、二抗體、串聯二抗體、雙可變結構域抗體和使用諸如Ch1/Ck結構域或DNLTM的基元的異源二聚(Chames&Baty,Curr. Opin. Drug. Discov. Devel.,12:276-83,2009;Chames&Baty,mAbs,1:539-47)。相關純化技術是公知的。Recent approaches utilize genetically engineered constructs that are capable of producing a homogeneous product of a single BiAb without the need for extensive purification to remove unwanted by-products. Such constructs include tandem scFv, diabodies, tandem diabodies, dual variable domain antibodies and heterodimerization using motifs such as Ch1/Ck domains or DNLTM (Chames & Baty, Curr. Opin. Drug. Discov. Devel., 12:276-83, 2009; Chames & Baty, mAbs, 1:539-47). Relevant purification techniques are well known.
還可以使用單淋巴細胞抗體方法通過克隆和表達由選擇用於產生特異性抗體的單個淋巴細胞產生的免疫球蛋白可變區cDNA來產生抗體,例如由Babcook J等人,Proc. Natl. Acad. Sci. USA. 93:7843-7848,1996;WO 92/02551;WO 2004/051268和WO 2004/106377所述的方法。Antibodies can also be produced using single lymphocyte antibody methods by cloning and expressing immunoglobulin variable region cDNAs produced by single lymphocytes selected for production of specific antibodies, for example by Babcook J et al., Proc. Natl. Acad. Sci. USA. 93:7843-7848, 1996; Methods described in WO 92/02551; WO 2004/051268 and WO 2004/106377.
用於產生例如用於免疫宿主或用於淘選諸如用於噬菌體展示(或酵母細胞或細菌細胞表面表達)的抗體的抗原多肽可以通過本領域熟知的方法從包含表達系統的遺傳工程改造的宿主細胞製備,或者它們可以是從天然生物來源回收。例如,可將編碼雙特異性抗體的一條或兩條多肽鏈的核酸通過多種已知的方法(如轉化、轉染、電穿孔、用核酸包被的微粒轟擊等)引入培養的宿主細胞。在一些實施方案中,編碼雙特異性抗體的核酸在被引入宿主細胞前可先插入至適於在宿主細胞中表達的載體中。典型的所述載體可包含使插入的核酸能夠在RNA和蛋白質水平上表達的序列元件。Antigenic polypeptides for use in generating, for example, immunizing a host or for panning for antibodies, such as for phage display (or yeast cell or bacterial cell surface expression) can be obtained from a genetically engineered host containing an expression system by methods well known in the art. Cells are prepared, or they can be recovered from natural biological sources. For example, nucleic acids encoding one or both polypeptide chains of a bispecific antibody can be introduced into cultured host cells by a variety of known methods (eg, transformation, transfection, electroporation, bombardment with nucleic acid-coated microparticles, etc.). In some embodiments, the nucleic acid encoding the bispecific antibody can be inserted into a vector suitable for expression in the host cell before being introduced into the host cell. Typically such vectors may contain sequence elements that enable expression of the inserted nucleic acid at both the RNA and protein levels.
本發明的雙特異性抗體,或其部分可通過常規的免疫學分析方法,例如酶聯免疫吸附試驗(ELISA),放射免疫分析(RIA)或組織免疫組織化學用於檢測任一或所有這些抗原(例如在生物樣品,如血清或血漿中)。本發明提供檢測生物樣品中的抗原的方法,該方法包括:使所述生物樣品與本發明的可特異識別所述抗原的雙特異性抗體,或抗體部分抗原相接觸,並檢測與抗原結合的抗體(或抗體部分),或非結合抗體(或抗體部分),由此檢測所述生物樣品中的所述抗原。所述抗體用可檢測的物質進行直接或間接的標記,以便於檢測結合或非結合抗體。合適的可檢測物質包括多種酶,修復基團,熒光物質,發光物質和放射性物質。合適的酶的例子包括,辣根過氧化物酶,鹼性磷酸酶,β-半乳糖苷酶,乙酰膽鹼酯酶;合適的修復基團複合物的例子包括鏈黴抗生物素蛋白/生物素和抗生物素蛋白/生物素;合適的熒光物質的例子包括7-羥基香豆素,熒光素,熒光素異硫氰酸鹽,鹼性蕊香紅B,二氯三嗪基胺熒光素,丹磺酰氯或藻紅蛋白;發光物質的例子包括3-氨基鄰苯二甲酰環肼;合適的放射性物質的例子包括I 125、I 131、 35S或 3H。 藥物組合物 Bispecific antibodies of the invention, or portions thereof, may be used to detect any or all of these antigens by conventional immunological assays, such as enzyme-linked immunosorbent assay (ELISA), radioimmunoassay (RIA) or tissue immunohistochemistry. (e.g. in biological samples such as serum or plasma). The present invention provides a method for detecting an antigen in a biological sample. The method includes: contacting the biological sample with a bispecific antibody of the present invention that can specifically recognize the antigen, or an antibody partial antigen, and detecting the antigen-binding An antibody (or antibody portion), or a non-binding antibody (or antibody portion), thereby detecting said antigen in said biological sample. The antibodies are directly or indirectly labeled with a detectable substance to facilitate detection of bound or unbound antibodies. Suitable detectable substances include various enzymes, repair groups, fluorescent substances, luminescent substances and radioactive substances. Examples of suitable enzymes include horseradish peroxidase, alkaline phosphatase, beta-galactosidase, acetylcholinesterase; examples of suitable repair group complexes include streptavidin/biotin and Avidin/Biotin; examples of suitable fluorescent substances include 7-hydroxycoumarin, fluorescein, fluorescein isothiocyanate, rhodopsin B, dichlorotriazinylamine fluorescein, fluorescein, Sulfonyl chloride or phycoerythrin; examples of luminescent substances include 3-aminophthaloyl cyclohydrazine; examples of suitable radioactive substances include I 125 , I 131 , 35 S or 3 H. pharmaceutical composition
本發明的雙特異性融合多肽或多功能融合蛋白或編碼其的核酸可以應用於製備藥物組合物或無菌組合物,例如,將雙特異性融合多肽或多功能融合蛋白與藥學上可接受的載體、賦形劑或穩定劑混合。藥物組合物可包括一種或組合的(如兩種或更多不同的)本發明的抗體其功能片段。例如,本發明的藥物組合物可包含與靶抗原上的不同表位結合的具有互補活性的抗體或抗體片段(或免疫綴合物)的組合。治療和診斷劑的製劑可通過以例如凍乾粉末、漿液、水性溶液或懸浮液的形式與藥學可接受的載體、賦形劑或穩定劑混合來製備。The bispecific fusion polypeptide or multifunctional fusion protein of the present invention or the nucleic acid encoding the same can be used to prepare pharmaceutical compositions or sterile compositions, for example, the bispecific fusion polypeptide or multifunctional fusion protein and a pharmaceutically acceptable carrier , excipients or stabilizers. Pharmaceutical compositions may include one or a combination (eg, two or more different) of the antibodies of the invention and functional fragments thereof. For example, a pharmaceutical composition of the invention may comprise a combination of antibodies or antibody fragments (or immunoconjugates) with complementary activities that bind to different epitopes on the target antigen. Formulations of therapeutic and diagnostic agents can be prepared by mixing with pharmaceutically acceptable carriers, excipients or stabilizers in the form of, for example, lyophilized powders, slurries, aqueous solutions or suspensions.
藥物組合物中的雙特異性融合多肽或多功能融合蛋白可以是與第二種激活劑(功能分子)結合的形式。所述第二種激活劑可以是能預防或治療目標疾病的隨機功能分子,可包括化合物,肽,多肽,核酸,碳水化合物,脂質,或無機粒子。在所述藥物組合物中,雙特異性融合多肽或多功能融合蛋白可以本身俱有治療活性;但它可以發揮將所述第二種激活劑靶向特異性疾病區的功能。所述疾病區可以是與抗原特異性結合的雙特異性抗體所聚集和分佈的那些器官,組織,或細胞。靶向所述疾病區的藥物以高濃度存在,使得藥物效應相比注射的量增加。因此,藥物組合物可以用於治療耐藥性腫瘤,並可以減少因非特異性藥物分佈所致的副作用和不利的藥物反應。The bispecific fusion polypeptide or multifunctional fusion protein in the pharmaceutical composition may be in a form combined with a second activator (functional molecule). The second activator can be a random functional molecule that can prevent or treat the target disease, and can include compounds, peptides, polypeptides, nucleic acids, carbohydrates, lipids, or inorganic particles. In the pharmaceutical composition, the bispecific fusion polypeptide or multifunctional fusion protein may itself have therapeutic activity; but it may function to target the second activator to a specific disease area. The disease areas may be those organs, tissues, or cells in which bispecific antibodies that specifically bind to the antigen are accumulated and distributed. Drugs targeting the disease area are present in high concentrations such that the drug effect is increased compared to the amount injected. Therefore, the pharmaceutical composition can be used to treat drug-resistant tumors and can reduce side effects and adverse drug reactions due to non-specific drug distribution.
藥物組合物中包含雙特異性融合多肽或多功能融合蛋白的激活劑可以容納在微膠囊中,或容納在膠體性質的藥物運送系統(如脂質體,白蛋白小球體,微乳劑,納米顆粒及納米膠囊)中,或者容納在大乳劑(macroemulsions)中,所述微膠囊可以通過諸如凝聚(coacervation)技術或界面聚合作用來製備,例子分別有羥甲基纖維素或明膠微膠囊和聚-(異丁烯酸甲酯)微膠囊。 醫藥用途與治療方法 The activator containing bispecific fusion polypeptide or multifunctional fusion protein in the pharmaceutical composition can be contained in microcapsules, or contained in colloidal drug delivery systems (such as liposomes, albumin globules, microemulsions, nanoparticles and Nanocapsules), or contained in macroemulsions, which can be prepared by techniques such as coacervation or interfacial polymerization, examples being hydroxymethylcellulose or gelatin microcapsules and poly-( Methyl methacrylate) microcapsules. Medical uses and treatments
本發明還涉及如上所述的雙特異性融合多肽或多功能融合蛋白在製備用於治療疾病的藥物中的應用。The present invention also relates to the use of the bispecific fusion polypeptide or multifunctional fusion protein as described above in the preparation of drugs for treating diseases.
本發明還涉及用作藥物的如上所述的雙特異性融合多肽或多功能融合蛋白;所述藥物用於治療疾病。The present invention also relates to the bispecific fusion polypeptide or multifunctional fusion protein as described above for use as a medicament; the medicament is used to treat diseases.
根據本發明一個方面,所述疾病可以是例如,癌症、免疫性病症、代謝性疾病以及微生物感染。According to one aspect of the invention, the disease may be, for example, cancer, immune disorders, metabolic diseases and microbial infections.
術語「癌症」是指以體內異常細胞的不受控生長為特徵的一大類疾病。「癌症」包括良性和惡性癌症以及休眠腫瘤或微轉移。The term "cancer" refers to a large group of diseases characterized by the uncontrolled growth of abnormal cells in the body. "Cancer" includes benign and malignant cancers as well as dormant tumors or micrometastases.
在一些實施方式中,微生物感染中微生物可以是外源病原體或帶有外源病原體例如病毒的細胞群體。本發明適用於諸如細菌、真菌、病毒、支原體和寄生蟲的外源病原體。可以用本發明治療的病原體可以是任何本領域熟知的在動物體內致病的感染性生物,包括諸如以下的生物:革蘭氏陰性或革蘭氏陽性球菌或桿菌的細菌、DNA病毒和RNA病毒,包括但不限於諸如乳頭瘤病毒、細小病毒、腺病毒、皰疹病毒和痘苗病毒的DNA病毒、以及諸如沙粒病毒、冠形病毒、鼻病毒、呼吸道合胞病毒、流感病毒、細小核糖核酸病毒、副粘病毒、呼腸孤病毒、逆轉錄病毒和彈狀病毒的RNA病毒。特別感興趣的是抗生素抗性細菌,例如抗生素抗性鏈球菌(Streptococcus species)和葡萄球菌(Staphlococcus species),或者是對抗生素敏感但引起用抗生素治療的複發性感染、以致最終產生抗性生物的細菌。這類生物可以用本發明的配體-免疫原綴合物與低於正常給予患者的劑量的抗生素聯合治療,以避免產生這些抗生素抗性細菌菌株。本發明也適用於任何真菌、支原體種、寄生蟲或在動物中致病的其它感染性生物。可以用本發明方法治療的真菌的實例包括生長為黴或酵母樣的真菌,包括例如引起諸如以下疾病的真菌:癬、組織胞漿菌病、芽生菌病、曲霉病、隱球菌病、孢子絲菌病、球孢子菌病、類球孢子菌病和念珠菌病。本發明可以用來治療寄生蟲感染,包括但不限於由以下寄生蟲引起的感染:體絛蟲、血吸蟲、組織蛔蟲、變形蟲和瘧原蟲屬(Plasmodium)、錐蟲屬(Trypanosoma)、利甚曼原蟲屬(Leishmania)和弓形體屬(Toxoplasma)種。特別感興趣的寄生蟲是表達葉酸受體並結合葉酸的寄生蟲;然而,在文獻中關於對感染性生物表現出高親和性的配體有大量的參考文獻。例如,已知其抗生素活性並且與細菌細胞壁前體特異性結合的青黴素和頭孢菌素同樣可以用作製備按照本發明使用的配體-免疫原綴合物的配體。本發明的配體-免疫原綴合物也可以針對帶有內源病原體的細胞群體,其中所述病原體特異性抗原優先在帶有所述病原體的細胞表面表達,並且用作與所述抗原特異性結合的配體的受體。In some embodiments, the microorganism in the microbial infection may be a foreign pathogen or a population of cells harboring a foreign pathogen, such as a virus. The invention is applicable to exogenous pathogens such as bacteria, fungi, viruses, mycoplasma and parasites. Pathogens that may be treated with the present invention may be any infectious organism known in the art that causes disease in animals, including organisms such as Gram-negative or Gram-positive cocci or bacilli, DNA viruses, and RNA viruses. , including but not limited to DNA viruses such as papillomaviruses, parvoviruses, adenoviruses, herpesviruses, and vaccinia viruses, and DNA viruses such as arenaviruses, coronaviruses, rhinoviruses, respiratory syncytial viruses, influenza viruses, and picornaviruses. RNA viruses of viruses, paramyxoviruses, reoviruses, retroviruses and rhabdoviruses. Of particular interest are antibiotic-resistant bacteria, such as antibiotic-resistant Streptococcus species and Staphlococcus species, or bacteria that are susceptible to antibiotics but cause recurrent infections treated with antibiotics, leading to the eventual development of resistant organisms. germ. Such organisms can be treated with the ligand-immunogen conjugates of the present invention in combination with lower doses of antibiotics than would normally be administered to patients to avoid the development of these antibiotic-resistant bacterial strains. The present invention also applies to any fungus, mycoplasma species, parasite or other infectious organism that causes disease in animals. Examples of fungi that may be treated by the methods of the present invention include fungi that grow like molds or yeasts, including, for example, fungi that cause diseases such as: ringworm, histoplasmosis, blastomycosis, aspergillosis, cryptococcosis, sporotrichosis Mycosis, coccidioidomycosis, coccidioidomycosis and candidiasis. The present invention can be used to treat parasitic infections, including but not limited to infections caused by the following parasites: tapeworms, schistosomiasis, histosomes, amoebae, and Plasmodium, Trypanosoma, Lechon Leishmania and Toxoplasma species. Parasites of particular interest are those that express folate receptors and bind folate; however, there are numerous references in the literature to ligands that exhibit high affinity for infectious organisms. For example, penicillins and cephalosporins, which are known for their antibiotic activity and which bind specifically to bacterial cell wall precursors, may also be used as ligands in the preparation of ligand-immunogen conjugates for use according to the invention. The ligand-immunogen conjugates of the present invention can also be targeted to cell populations harboring endogenous pathogens, wherein the pathogen-specific antigen is preferentially expressed on the surface of cells harboring the pathogen and serves as a target specific for the antigen. Receptors for sexually binding ligands.
本發明還涉及一種預防和/或治療和施用治療有效量的藥物組合物以預防和/或治療如上所述疾病的方法。The present invention also relates to a method of preventing and/or treating and administering a therapeutically effective amount of a pharmaceutical composition to prevent and/or treat diseases as described above.
本發明的方法可以用於人類臨床醫學和獸醫學應用。因此,帶有致病生物群體並且用配體-免疫原綴合物治療的宿主動物可以是人類,或者在獸醫學應用的情況下,可以是實驗室動物、農用動物、馴養動物或野生動物。本發明可以適用於包括但不限於以下的宿主動物:人類;實驗室動物,諸如囓齒動物(例如小鼠、大鼠、倉鼠等)、兔、猴、黑猩猩;馴養動物,例如狗、貓和兔;農用動物,例如牛、馬、豬、綿羊、山羊;和關養的野生動物,例如熊、熊貓、獅、虎、豹、大象、斑馬、長頸鹿、大猩猩、海豚和鯨。The methods of the invention can be used in human clinical medicine and veterinary medicine applications. Thus, the host animal harboring the pathogenic organism population and treated with the ligand-immunogen conjugate may be a human, or in the case of veterinary applications, a laboratory animal, an agricultural animal, a domestic animal, or a wild animal. The present invention may be applicable to host animals including, but not limited to, humans; laboratory animals such as rodents (e.g. mice, rats, hamsters, etc.), rabbits, monkeys, chimpanzees; domesticated animals such as dogs, cats and rabbits ; Agricultural animals, such as cattle, horses, pigs, sheep, goats; and captive wild animals, such as bears, pandas, lions, tigers, leopards, elephants, zebras, giraffes, gorillas, dolphins and whales.
藥物組合物可通過多種途徑注射至實體中,所述實體包括大鼠、小鼠、家養動物、和/或人類。所有註射方法都可以預期,例如,口服,直腸,靜脈,鼻,腹部,皮下,或局部注射都是有可能的。組合物可以用本領域已知的其它方法來注射。Pharmaceutical compositions can be injected into entities, including rats, mice, domestic animals, and/or humans, by a variety of routes. All injection methods are contemplated, for example, oral, rectal, intravenous, nasal, abdominal, subcutaneous, or local injections are possible. The compositions may be injected using other methods known in the art.
「治療有效量」在本文中是指,根據合理的益損比來看,能治療疾病的足夠量。治療有效量可以因患者引起的多種原因而有不同,所述原因例如,疾病類型、嚴重程度、發作、實體的年齡、體重、排泄速度、反應易感性、健康狀態、和/或併發症;和/或藥物活性、注射途徑、注射週期和注射次數、和/或藥物組合;也可以由本領域普通技術人員根據治療目的進行適當選擇。例如,注射量可以隨機分為多次,使得該量為約0.001-100mg/kg成人體重。"Therapeutically effective dose" in this article refers to a sufficient amount that can treat the disease based on a reasonable profit-loss ratio. The therapeutically effective amount may vary for a variety of reasons attributable to the patient, such as disease type, severity, onset, age of the entity, weight, excretion rate, susceptibility to reactions, health status, and/or complications; and /or drug activity, injection route, injection cycle and number of injections, and/or drug combination; can also be appropriately selected according to the purpose of treatment by those of ordinary skill in the art. For example, the injection amount can be randomly divided into multiple times so that the amount is about 0.001-100 mg/kg adult body weight.
本發明的雙特異性融合多肽或多功能融合蛋白或編碼本發明抗體的核酸或多核苷酸還可與例如標準癌症治療(例如,手術、放射和化學療法)組合施用。例如,使用本發明的組合物和/或裝備了這些組合物的效應細胞的抗腫瘤療法與化學療法聯合使用。本發明抗體組合治療的非限制性實例包括手術、化療、放療、免疫療法、基因療法、DNA療法、RNA療法、納米療法、病毒療法、輔助療法及其組合。Bispecific fusion polypeptides or multifunctional fusion proteins of the invention or nucleic acids or polynucleotides encoding antibodies of the invention may also be administered in combination with, for example, standard cancer treatments (eg, surgery, radiation, and chemotherapy). For example, anti-tumor therapy using the compositions of the invention and/or effector cells equipped with these compositions is used in combination with chemotherapy. Non-limiting examples of antibody combination treatments of the invention include surgery, chemotherapy, radiotherapy, immunotherapy, gene therapy, DNA therapy, RNA therapy, nanotherapy, viral therapy, adjuvant therapy, and combinations thereof.
下面將結合實施例對本發明的實施方案進行詳細描述。 實施例 1 、 FiBody 設計 The embodiments of the present invention will be described in detail below with reference to examples. Example 1 , FiBody design
在一些實施例中,FiBody是利用配體及其受體之間特異性親和力,取代雙特異性抗體一側的CL和CH1,重組獲得的雙特異性抗體,其能夠避免或減少雙特異性抗體輕鏈與重鏈發生錯配。In some embodiments, FiBody is a bispecific antibody obtained by recombination by replacing CL and CH1 on one side of the bispecific antibody by utilizing the specific affinity between the ligand and its receptor, which can avoid or reduce the bispecific antibody. A mismatch occurs between the light chain and the heavy chain.
本實施例以白細胞介素及其受體為例構建FiBody,根據白細胞介素及其受體的立體構像將其分為四類,見下表5和圖5:In this embodiment, interleukin and its receptor are used as an example to construct FiBody. Interleukin and its receptor are divided into four categories according to their three-dimensional conformation, as shown in Table 5 below and Figure 5:
表5. FiBody分類
基於以上4類白細胞介素及其受體分別構建雙特異性抗體。 實施例 2 、基於白細胞介素及其受體 FiBody 的構建 Bispecific antibodies were constructed based on the above four types of interleukins and their receptors. Example 2. Construction of FiBody based on interleukin and its receptor
選取靶向第一抗體的VH通過Linker連接在受體蛋白上,再通過Hinge與抗體的Fc連接;靶向第一抗體的VL通過Linker連接在配體蛋白上,以降低或避免輕鏈與重鏈發生錯配;另一端為靶向第二抗體(抗TIGIT抗體)的完整Fab結構,組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以降低或避免重鏈發生錯配。或Select the VH targeting the first antibody to be connected to the receptor protein through a Linker, and then connect to the Fc of the antibody through Hinge; the VL targeting the first antibody is connected to the ligand protein through a Linker to reduce or avoid the interaction between the light chain and the heavy chain. Chain mismatch occurs; the other end is the complete Fab structure targeting the second antibody (anti-TIGIT antibody). The Fc of the first antibody and the Fc of the second antibody have conventional KiH modifications to reduce or avoid heavy chain mismatches. match. or
選取靶向第一抗體的VH通過Linker連接在配體蛋白上,再通過Hinge與抗體的Fc連接;靶向第二抗體的VL通過Linker連接在受體蛋白(IL15)上,以降低或避免輕鏈與重鏈發生錯配;另一端為靶向第一抗體的完整Fab結構,組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以降低或避免重鏈錯配。構建的一些示例性FiBody分子結構及序列表見表6及表7Select the VH targeting the first antibody and connect it to the ligand protein through a linker, and then connect it to the Fc of the antibody through Hinge; the VL targeting the second antibody is connected to the receptor protein (IL15) through a linker to reduce or avoid mild disease. The chain and heavy chain mismatch occurs; the other end is the complete Fab structure targeting the first antibody. The Fc that makes up the first antibody and the Fc that makes up the second antibody have conventional KiH modifications to reduce or avoid heavy chain mismatches. Some exemplary FiBody molecular structures and sequence lists constructed are shown in Table 6 and Table 7
表6. FiBody分子結構
表7.示例性FiBody分子序列
3.1為了進一步改善雙特異性抗體穩定性並且延長雙特異性抗體的半衰期,對雙特異性抗體進行二硫鍵改造,見圖8。3.1 In order to further improve the stability of the bispecific antibody and extend the half-life of the bispecific antibody, the disulfide bond of the bispecific antibody is modified, see Figure 8.
配受體二硫鍵改造:選取靶向第二抗體(抗TIGIT)的VH通過Linker連接在受體蛋白(IL15RA)上,再通過Hinge與抗體的Fc連接;靶向第二抗體的VL通過Linker連接在配體蛋白(IL15)上;另一端為靶向第一抗體的完整Fab結構,組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以避免重鏈錯配。同時,對受體、配體蛋白進行突變,目的形成分子間二硫鍵,進一步提高分子的穩定性,具體例如下表8:Ligand receptor disulfide bond modification: select the VH targeting the second antibody (anti-TIGIT) and connect it to the receptor protein (IL15RA) through the Linker, and then connect it to the Fc of the antibody through Hinge; the VL targeting the second antibody is connected through the Linker Connected to the ligand protein (IL15); the other end is the complete Fab structure targeting the first antibody. The Fc that makes up the first antibody and the Fc that makes up the second antibody have conventional KiH modifications to avoid heavy chain mismatching. At the same time, the receptor and ligand proteins are mutated in order to form intermolecular disulfide bonds and further improve the stability of the molecules. For example, Table 8 below:
表8. 二硫鍵改造的的雙特異性抗體的氨基酸序列
3.2在VH、VL之間設計二硫鍵改造,形成dsFv,幫助非共價設計的受配體重、輕鏈之間形成共價二硫鍵鏈接。二硫鍵改造位置包括但不限於以下突變位點:3.2 Design disulfide bond modification between VH and VL to form dsFv, which helps to form covalent disulfide linkage between the non-covalently designed ligand heavy and light chains. Disulfide bond modification positions include but are not limited to the following mutation sites:
表9. VH、VL之間設計二硫鍵改造位置
表10. VH/VL二硫鍵改造的雙特異性抗體的氨基酸序列
Fab-IL15/IL15RA_Fc的構建方法,具體選取靶向第二抗體(抗TIGIT)的VH通過Linker連接在受體蛋白(IL15RA)上,再通過Hinge與抗體的Fc連接;靶向第二抗體的VL通過Linker連接在配體蛋白(IL15)上;另一端為靶向第一抗體的完整Fab結構,組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以避免重鏈錯配。同時,對受體、配體蛋白進行突變,目的形成分子間二硫鍵,進一步提高分子的穩定性;進一步的,對受體、配體蛋白上的糖基化位點進行改造,目的是消除分子的異質性,具體例如:The construction method of Fab-IL15/IL15RA_Fc specifically selects the VH targeting the second antibody (anti-TIGIT) to be connected to the receptor protein (IL15RA) through the Linker, and then connects to the Fc of the antibody through Hinge; the VL targeting the second antibody is Connected to the ligand protein (IL15) through a Linker; the other end is the complete Fab structure targeting the first antibody. The Fc that makes up the first antibody and the Fc that makes up the second antibody have conventional KiH modifications to avoid heavy chain mismatching. . At the same time, the receptor and ligand proteins are mutated to form intermolecular disulfide bonds to further improve the stability of the molecules; further, the glycosylation sites on the receptor and ligand proteins are modified to eliminate Molecular heterogeneity, such as:
表11. IL15/IL15RA改造的雙特異性抗體的氨基酸序列
在某些應用中,為了避免IL15/IL15RA及其組成的雙特異性抗體與IL2/15Rβ/γC複合物相互作用,引起不需要的非特異性結合,我們對IL15/IL15RA及其組成的雙特異性抗體進行改造,以降低或完全喪失IL15/IL15RA與IL2/15Rβ/γC複合物親和力。通過檢查IL15/IL15RA與IL2/15Rβ/γC複合物作用界面晶體結構,以及使用Molecular Operating Environment(MOE;Chemical Computing Group, Montreal,Quebec,加拿大)軟件建模,我們預測在IL15/IL15RA界面處可以進行氨酸突變改造以便降低或完全喪失IL15/IL15RA與IL2/15Rβ/γC複合物親和力,如圖9中描繪的。In some applications, in order to avoid IL15/IL15RA and its component bispecific antibodies from interacting with the IL2/15Rβ/γC complex and causing unwanted non-specific binding, we have designed IL15/IL15RA and its component bispecific antibodies. The specific antibody is modified to reduce or completely lose the affinity of IL15/IL15RA and IL2/15Rβ/γC complex. By examining the crystal structure of the interface between IL15/IL15RA and the IL2/15Rβ/γC complex and modeling using Molecular Operating Environment (MOE; Chemical Computing Group, Montreal, Quebec, Canada) software, we predict that at the IL15/IL15RA interface Amino acid mutations were engineered to reduce or completely lose the affinity of IL15/IL15RA to the IL2/15Rβ/γC complex, as depicted in Figure 9 .
描述Fab-IL15/IL15RA_Fc的構建方法,具體選取靶向第二抗體(抗TIGIT)的VH通過Linker連接在受體蛋白(IL15RA)上,再通過Hinge與抗體的Fc連接;靶向第二抗體的VL通過Linker連接在配體蛋白(IL15)上;另一端為靶向第一抗體的完整Fab結構,組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以避免重鏈錯配。同時,對配體蛋白進行突變,目的是降低或失活受、配體複合物的生物學功能,具體例如:Describe the construction method of Fab-IL15/IL15RA_Fc. Specifically, the VH targeting the second antibody (anti-TIGIT) is connected to the receptor protein (IL15RA) through the Linker, and then connected to the Fc of the antibody through Hinge; the VH targeting the second antibody is VL is connected to the ligand protein (IL15) through a Linker; the other end is a complete Fab structure targeting the first antibody. The Fc that makes up the first antibody and the Fc that makes up the second antibody have conventional KiH modifications to avoid heavy chain misunderstandings. match. At the same time, the ligand protein is mutated in order to reduce or inactivate the biological function of the receptor and ligand complex, for example:
表12. IL15/IL15RA改造的雙特異性抗體的氨基酸序列
實施例6、構建基於scFv、CrossMab結構的雙特異性抗體作為實驗對照Example 6. Construction of bispecific antibodies based on scFv and CrossMab structures as experimental controls
正如前文所描述,scFv和CrossMab都是常用的雙特異性抗體構建技術手段,在這裡作為設計對照,跟我們的分子進行對比:As described above, scFv and CrossMab are both commonly used bispecific antibody construction technologies. Here they are used as a design control to compare with our molecules:
基於scFv結構雙抗的構建方法,具體選取靶向第二抗體(抗TIGIT)的VH通過Linker連接至第二抗體的VL上形成scFv結構,再通過Hinge與抗體的Fc連接;另一端為靶向第一抗體的完整Fab結構,(此雙抗平台為武漢友芝友開發,命名為Ybody),組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以避免重鏈錯配。具體例如:Based on the construction method of scFv structure double antibody, the VH of the targeting second antibody (anti-TIGIT) is specifically selected to be connected to the VL of the second antibody through the Linker to form the scFv structure, and then connected to the Fc of the antibody through Hinge; the other end is the targeting The complete Fab structure of the first antibody (this dual-antibody platform was developed by Wuhan Youzhiyou and named Ybody). The Fc that makes up the first antibody and the Fc that makes up the second antibody have conventional KiH modifications to avoid heavy chain mismatching. . Specific examples:
表13. Y-Body結構雙抗分子序列
描述基於scFv結構雙抗的構建方法,具體選取靶向第二抗體(抗TIGIT)的VH通過Linker連接至第二抗體的VL上形成scFv結構,再通過Linker與完整的靶向第一抗體的Fc的C端連接;組成一個對稱的結構。具體例如:Describes the construction method of double antibodies based on the scFv structure. Specifically, the VH targeting the second antibody (anti-TIGIT) is connected to the VL of the second antibody through a Linker to form an scFv structure, and then the linker is used with the complete Fc targeting the first antibody. The C-terminal connection; forming a symmetrical structure. Specific examples:
表14. scFv結構雙抗分子序列
基於CrossMab結構雙抗的構建方法,具體選取靶向第二抗體(抗TIGIT)的VH連接至CL結構域,再通過Hinge與抗體的Fc連接,靶向第二抗體(抗TIGIT)的VL連接至CH1結構域,形成輕鏈;另一端為靶向第一抗體的完整Fab結構,組成第一抗體的Fc與組成第二抗體的Fc具有常規的KiH改造,以避免重鏈錯配。具體例如:Based on the CrossMab structural double antibody construction method, the VH targeting the second antibody (anti-TIGIT) is specifically selected to be connected to the CL domain, and then connected to the Fc of the antibody through Hinge, and the VL targeting the second antibody (anti-TIGIT) is connected to The CH1 domain forms the light chain; the other end is the complete Fab structure targeting the first antibody. The Fc that makes up the first antibody and the Fc that makes up the second antibody have conventional KiH modifications to avoid heavy chain mismatches. Specific examples:
表15. CrossMab結構雙抗分子序列
輕鏈錯配是雙抗平檯面臨的一個難點問題。為了驗證本平台防錯配性能,我們專門設計了受體、配體分佈在抗體兩邊的Fab,故意設計錯配的重、輕鏈結構,並進行表達驗證。Light chain mismatch is a difficult problem faced by dual-antibody platforms. In order to verify the anti-mismatch performance of this platform, we specially designed a Fab with receptors and ligands distributed on both sides of the antibody, deliberately designed mismatched heavy and light chain structures, and performed expression verification.
描述Fab-IL15/IL15RA_Fc錯配的構建方法:Describe the construction method of Fab-IL15/IL15RA_Fc mismatch:
R1042:具體選取靶向第一抗體(抗PD-L1抗體)的VH通過Linker連接在受體蛋白(IL15RA)上,再通過Hinge與抗體的Fc連接;靶向第二抗體(抗TIGIT抗體)的VL通過Linker連接在配體蛋白(IL15)上;另一端為靶向第二抗體的VH通過常規序列連接在CH1,再通過Hinge與抗體的Fc連接,靶向第一抗體的VL通過常規序列連接在CL,兩個Fc具有常規的KiH改造,以避免重鏈錯配。具體例如:R1042: Specifically select the VH targeting the first antibody (anti-PD-L1 antibody) to be connected to the receptor protein (IL15RA) through Linker, and then connect to the Fc of the antibody through Hinge; the VH targeting the second antibody (anti-TIGIT antibody) VL is connected to the ligand protein (IL15) through Linker; the other end is the VH targeting the second antibody, which is connected to CH1 through a conventional sequence, and then connected to the Fc of the antibody through Hinge, and the VL targeting the first antibody is connected through a conventional sequence In CL, both Fcs have conventional KiH modifications to avoid heavy chain mispairing. Specific examples:
表16. 錯配的FiBody抗體序列
R1043:具體選取靶向第二抗體(抗TIGIT抗體)的VH通過Linker連接在受體蛋白(IL15RA)上,再通過Hinge與抗體的Fc連接;靶向第一抗體(抗PD-L1抗體)的VL通過Linker連接在配體蛋白(IL15)上;另一端為靶向第一抗體的VH通過常規序列連接在CH1,再通過Hinge與抗體的Fc連接,靶向第二抗體的VL通過常規序列連接在CL,兩個Fc具有常規的KiH改造,以避免重鏈錯配。R1043: Specifically select the VH targeting the second antibody (anti-TIGIT antibody) to be connected to the receptor protein (IL15RA) through Linker, and then connect to the Fc of the antibody through Hinge; the VH targeting the first antibody (anti-PD-L1 antibody) VL is connected to the ligand protein (IL15) through Linker; the other end is the VH targeting the first antibody connected to CH1 through a conventional sequence, and then connected to the Fc of the antibody through Hinge, and the VL targeting the second antibody is connected through a conventional sequence In CL, both Fcs have conventional KiH modifications to avoid heavy chain mispairing.
表17. KiH雙抗序列
描述Fab-IL21/IL21R_Fc錯配的構建方法:Describe the construction method of Fab-IL21/IL21R_Fc mismatch:
選取靶向第二抗體(抗PD-L1抗體)的VH通過Linker連接在受體蛋白(IL21R)上,再通過Hinge與抗體的Fc連接;靶向第一抗體(抗TIGIT抗體)的VL通過Linker連接在配體蛋白(IL21)上;另一端為靶向第二抗體(抗PD-L1抗體)的VL連接在CL上,靶向結構第一抗體(抗TIGIT抗體)的VH連接在CH1上 ,再通過Hinge與抗體的Fc連接,兩端的Fc具有常規的KiH改造。具體例如:Select the VH targeting the second antibody (anti-PD-L1 antibody) and connect it to the receptor protein (IL21R) through Linker, and then connect it to the Fc of the antibody through Hinge; the VL targeting the first antibody (anti-TIGIT antibody) is connected through Linker Connected to the ligand protein (IL21); the other end is the VL of the targeting second antibody (anti-PD-L1 antibody) connected to CL, and the VH of the targeting structure first antibody (anti-TIGIT antibody) is connected to CH1, Then it is connected to the Fc of the antibody through Hinge, and the Fc at both ends has conventional KiH modification. Specific examples:
表18.Fab-IL21/IL21R_Fc錯配
蛋白瞬轉表達:Protein transient expression:
將含有目的基因的質粒通過與轉染試劑PEI形成陽離子復合物後,導入到宿主細胞Expi293,質粒在細胞內期間,質粒上的外源基因在細胞內發生轉錄翻譯,從而得到目的蛋白。After the plasmid containing the target gene forms a cationic complex with the transfection reagent PEI, it is introduced into the host cell Expi293. While the plasmid is in the cell, the foreign gene on the plasmid is transcribed and translated in the cell to obtain the target protein.
Expi293在37℃、8%二氧化碳、130rpm條件培養,並在轉染前通過細胞計數,將2E6的細胞接種至1L搖瓶中,培養體系約為300ml。配製轉染複合物準備轉染:首先將750μg 目標質粒加入到含有15mlOpti-MEM試劑的50ml離心管中,輕輕混勻,標記為A管;將1.5mg轉染試劑PEI加入到含有15mlOpti-MEM試劑的50ml離心管中,輕輕混勻後,室溫孵育5min,標記為B管;將B管PEI稀釋液逐滴加入到A管DNA稀釋液中,輕輕混勻後,室溫孵育15min,孵育結束後,將PEI-目標質粒 複合物加入到Expi293細胞,置於37℃搖床中繼續培養。直到D7-D10後收樣。Expi293 was cultured at 37°C, 8% carbon dioxide, and 130 rpm, and the cells were counted before transfection. The 2E6 cells were inoculated into a 1L shake flask, and the culture system was about 300 ml. Prepare the transfection complex and prepare for transfection: first add 750 μg of target plasmid into a 50 ml centrifuge tube containing 15 ml Opti-MEM reagent, mix gently, and mark it as tube A; add 1.5 mg transfection reagent PEI into a 50 ml centrifuge tube containing 15 ml Opti-MEM reagent in a 50ml centrifuge tube, mix gently, and incubate at room temperature for 5 minutes, label it tube B; add the PEI diluent in tube B dropwise to the DNA diluent in tube A, mix gently, and incubate at room temperature for 15 minutes. , after the incubation, add the PEI-target plasmid complex to Expi293 cells and place them in a 37°C shaker to continue culturing. Samples were collected after D7-D10.
蛋白純化:Protein purification:
瞬轉細胞表達液經過9000rpm/20min離心,收集上清,再經過0.22μm濾膜除菌過濾。純化採用ProA親和層析。過程如下,使用AKTA avant 150層析設備,用至少5CV平衡緩衝液(10mM PBS)平衡層析柱(如MabSelectSuRe LX,GE),加載樣品至層析柱,使目標蛋白吸附在層析柱上而其他雜質穿透分離。完成上樣後使用至少5CV平衡緩衝液(10mM PBS)再次沖洗層析柱,隨後使用洗脫緩衝液(20mM NaAc,pH=3.4)洗脫目標蛋白,收集管中預先加入中和緩衝液(1M Tris,pH8.0),中和緩衝液的加入體積根據洗脫樣品的預估含量而定,一般加入10%洗脫體積量。
實施例 9 、 FiBody 理化檢測 The transiently transfected cell expression solution was centrifuged at 9000rpm/20min, the supernatant was collected, and then sterilized and filtered through a 0.22μm filter membrane. Purification was performed using ProA affinity chromatography. The process is as follows, use
樣品經過一步純化後通過HPLC-SEC進行檢測(分析柱TOSOH,TSKgel G2000)純度,各個樣品的表達量及純度結果見下表。After one-step purification, the purity of the sample was tested by HPLC-SEC (analytical column TOSOH, TSKgel G2000). The expression level and purity results of each sample are shown in the table below.
表19. 雙特異性抗體理化檢測結果
樣品R0951的HPLC-SEC進行檢測結果如圖11所示,樣品R1042的HPLC-SEC進行檢測結果如圖12所示,樣品R0809的HPLC-SEC進行檢測結果如圖13所示,樣品R1110的HPLC-SEC進行檢測結果如圖14所示。The HPLC-SEC detection results of sample R0951 are shown in Figure 11, the HPLC-SEC detection results of sample R1042 are shown in Figure 12, the HPLC-SEC detection results of sample R0809 are shown in Figure 13, the HPLC-SEC detection results of sample R1110 The results of SEC detection are shown in Figure 14.
結果顯示,相比於非對稱scFv(Y-Body,R0809)、對稱ScFv(R0810)、CrossMab(R0959)結構的雙特異性抗體,FiBody平台製備雙特異性抗體(包括各種改造優化抗體)具有更高的表達量和/或更高的純度。The results show that compared with bispecific antibodies with asymmetric scFv (Y-Body, R0809), symmetric ScFv (R0810), and CrossMab (R0959) structures, bispecific antibodies (including various modified and optimized antibodies) prepared on the FiBody platform have better Higher expression and/or higher purity.
意外的是具有錯誤配對形式的雙特異性抗體(樣品R1042、R1043、R1124)也能表達並具有類似正常分子的表達量,但是具有明顯低的純度。 實施例 10 、 FiBody 抗原親和力檢測TIGIT端結合活性分析 Unexpectedly, bispecific antibodies with mispaired forms (samples R1042, R1043, R1124) were also expressed and had expression levels similar to normal molecules, but with significantly lower purity. Example 10 , FiBody antigen affinity detection TIGIT end binding activity analysis
通過FCM實驗方法檢測雙抗分子(TIGIT端)與CHO-TIGIT細胞結合活性。配置3%BSA緩衝液:稱取4.5 gBSA到150mL 1XPBS中,混勻後放置冰上備用;抗體稀釋:將受試抗體、陽性對照用3%BSA稀釋成初始濃度為800nM,亞型對照稀釋成初始濃度為20μg/mL,體積300μL,3倍梯度稀釋(100+200)共10個點; 結合活性檢測:細胞計數並鋪板:將R0254-3細胞計數後,按100μL,2E+05/孔分到96孔V型板中;先將不同濃度抗體50μL加入到細胞中,2-8度孵育0.5h,再加入50μL配體,2-8度孵育0.5h;350xg離心5min後,去掉上清,按200μL/孔3%BSA;350xg離心5min後,去掉上清,3%BSA配製熒光抗體PE Goat anti-human IgG Fc和PE Goat anti-mouse IgG Fc(1:500x稀釋),按100μL/孔加入對應的96孔板中,2-8度孵育30min;350g離心5min,去上清,3%BSA洗一遍細胞;350xg離心5min後,去掉上清,按100μL/孔加入1XPBS重懸細胞;按照CytoFLEX流式細胞儀標準操作規程上機檢測。The binding activity between the double antibody molecule (TIGIT end) and CHO-TIGIT cells was detected by FCM experimental method. Configure 3% BSA buffer: weigh 4.5 gBSA into 150mL 1XPBS, mix well and place on ice for later use; antibody dilution: dilute the test antibody and positive control with 3% BSA to an initial concentration of 800nM, and dilute the subtype control to an initial concentration of 800nM. The initial concentration is 20 μg/mL, the volume is 300 μL, 3-fold gradient dilution (100+200), a total of 10 points; Binding activity detection: Cell counting and plating: After counting R0254-3 cells, divide into 100 μL, 2E+05/well into a 96-well V-type plate; first add 50 μL of antibodies of different concentrations to the cells, incubate at 2-8 degrees for 0.5 hours, then add 50 μL of ligand, and incubate at 2-8 degrees for 0.5 hours; centrifuge at 350xg for 5 minutes, remove the supernatant, Add 200 μL/well of 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, prepare fluorescent antibodies PE Goat anti-human IgG Fc and PE Goat anti-mouse IgG Fc (1:500x dilution) in 3% BSA, add 100 μL/well In the corresponding 96-well plate, incubate at 2-8 degrees for 30 minutes; centrifuge at 350g for 5 minutes, remove the supernatant, and wash the cells with 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, and add 1XPBS at 100 μL/well to resuspend the cells; follow CytoFLEX Flow cytometer standard operating procedures for on-machine testing.
結果如圖15-圖18所示;意外的是R0950(@TIGIT在Fab端)結合活性低於R0951~ R0960(@TIGIT在IL15/IL15R端);R0951~ R0960結合活性與陽性對照R0226(Tigit單克隆抗體,OMP-313R12,WO2016191643)相近;A類和D類白細胞介素及其受體替換CH1和CL後,靶向區結合力並未受到影響,與陽性對照(R0226\R0774(VH如序列如SEQ ID NO:73所示,VL序列如SEQ ID NO:74所示),Tigit單克隆抗體)表現出了相當的親和力; C類分子的替換CH1和CL後靶向區受到影響,靶向結合力明顯低於陽性對照(R0226\R0774, Tigit單克隆抗體)。The results are shown in Figures 15 to 18; unexpectedly, the binding activity of R0950 (@TIGIT is at the Fab end) is lower than that of R0951~R0960 (@TIGIT is at the IL15/IL15R end); the binding activity of R0951~R0960 is the same as the positive control R0226 (Tigit single The cloned antibody, OMP-313R12, WO2016191643) is similar; after replacing CH1 and CL with class A and class D interleukins and their receptors, the binding ability of the targeting region is not affected, and is similar to the positive control (R0226\R0774 (VH as sequence As shown in SEQ ID NO:73, the VL sequence is as shown in SEQ ID NO:74), Tigit monoclonal antibody) showed considerable affinity; after the replacement of CH1 and CL in class C molecules, the targeting region was affected, and the targeting The binding capacity is significantly lower than that of the positive control (R0226\R0774, Tigit monoclonal antibody).
二硫鍵改造優化樣品R1081、R1085及糖基化樣品改造分子與改造之前分子相比tigit端親和力結果相當。The tigit end affinity results of the modified molecules of disulfide bond modified optimized samples R1081, R1085 and glycosylated samples are comparable to those of the molecules before modification.
R1042、R1043及R1124為錯配測試分子,其TIGIT結合活性顯著降低;R0810是ScFv結構分子,結合活性也弱于對照分子R0226。 PD-L1端結合活性分析 R1042, R1043 and R1124 are mismatched test molecules, and their TIGIT binding activity is significantly reduced; R0810 is a ScFv structural molecule, and its binding activity is also weaker than that of the control molecule R0226. PD-L1 terminal binding activity analysis
通過FCM實驗方法檢測雙抗分子(PD-L1端)與CHO-PD-L1細胞結合活性。配置3%BSA緩衝液:稱取4.5 gBSA到150mL 1XPBS中,混勻後放置冰上備用;抗體稀釋:將受試抗體、陽性對照用3%BSA稀釋成初始濃度為800nM,亞型對照稀釋成初始濃度為20μg/mL,體積300μL,3倍梯度稀釋(100+200)共10個點;結合活性檢測:細胞計數並鋪板:將R0254-3細胞計數後,按100μL,2E+05/孔分到96孔V型板中;先將不同濃度抗體50μL加入到細胞中,2-8度孵育0.5h,再加入50μL配體,2-8度孵育0.5h;350xg離心5min後,去掉上清,按200μL/孔3%BSA;350xg離心5min後,去掉上清,3%BSA配製螢光抗體PE Goat anti-human IgG Fc和PE Goat anti-mouse IgG Fc(1:500x稀釋),按100μL /孔加入對應的96孔板中,2-8度孵育30min;350g離心5min,去上清,3%BSA洗一遍細胞;350xg離心5min後,去掉上清,按100μL/孔加入1XPBS重懸細胞;按照CytoFLEX流式細胞儀標準操作規程上機檢測。The binding activity of the double antibody molecule (PD-L1 end) and CHO-PD-L1 cells was detected by FCM experimental method. Configure 3% BSA buffer: weigh 4.5 gBSA into 150mL 1XPBS, mix well and place on ice for later use; antibody dilution: dilute the test antibody and positive control with 3% BSA to an initial concentration of 800nM, and dilute the subtype control to an initial concentration of 800nM. The initial concentration is 20 μg/mL, the volume is 300 μL, 3-fold gradient dilution (100+200), a total of 10 points; binding activity detection: cell counting and plating: after counting R0254-3 cells, divide into 100 μL, 2E+05/well into a 96-well V-type plate; first add 50 μL of antibodies of different concentrations to the cells, incubate at 2-8 degrees for 0.5 hours, then add 50 μL of ligand, and incubate at 2-8 degrees for 0.5 hours; centrifuge at 350xg for 5 minutes, remove the supernatant, 200 μL/well 3% BSA; after centrifugation at 350xg for 5 minutes, remove the supernatant, prepare fluorescent antibodies PE Goat anti-human IgG Fc and PE Goat anti-mouse IgG Fc (1:500x dilution) in 3% BSA, 100 μL/well Add to the corresponding 96-well plate and incubate at 2-8 degrees for 30 minutes; centrifuge at 350g for 5 minutes, remove the supernatant, and wash the cells with 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, and add 1XPBS at 100 μL/well to resuspend the cells; follow CytoFLEX flow cytometer standard operating procedures for on-machine testing.
結果如圖19-圖23所示,意外的是@PD-L1放在IL15端的活性要好於放在Fab端;R1042、R1043及R1124是對應錯配分子,活性明顯很弱,其他FiBody均顯示了與陽性抗體(PD-L1單克隆抗體)相當的親和力。其中R0802為(PD-L1單抗,176F9,VH序列如SEQ ID NO:36所示,VL序列如SEQ ID NO:37所示),R0514為(PD-L1單抗,Avelumab),R0919為(PD-L1單抗,VH如序列如SEQ ID NO:75所示,VL序列如SEQ ID NO:76所示),R0968為(PD-L1單抗,VH如序列如SEQ ID NO:71所示,VL序列如SEQ ID NO:72所示) 實施例 11 、 FiBody 受體配體複合物( IL15/IL15R )的結合活性 The results are shown in Figures 19 to 23. Surprisingly, the activity of @PD-L1 on the IL15 end is better than that on the Fab end; R1042, R1043 and R1124 are corresponding mismatched molecules, and the activity is obviously very weak, and other FiBody all show Comparable affinity to positive antibodies (PD-L1 monoclonal antibodies). Among them, R0802 is (PD-L1 monoclonal antibody, 176F9, the VH sequence is shown in SEQ ID NO: 36, and the VL sequence is shown in SEQ ID NO: 37), R0514 is (PD-L1 monoclonal antibody, Avelumab), and R0919 is ( PD-L1 monoclonal antibody, VH sequence is shown in SEQ ID NO:75, VL sequence is shown in SEQ ID NO:76), R0968 is (PD-L1 monoclonal antibody, VH sequence is shown in SEQ ID NO:71 , the VL sequence is shown in SEQ ID NO:72) Example 11. Binding activity of FiBody receptor ligand complex ( IL15/IL15R )
抗體稀釋:用FACS buffer 將所有分子稀釋成初始濃度400nM,體積180μl,3倍梯度稀釋(60+120),10個濃度;細胞計數並鋪板:將R0255-2(CHO-mTigit)/293T-IL15R-28細胞離心250g 5min後棄去上清,用FACS buffer調整細胞密度為2E+06,按100μL/管均分到96孔V型板中;將上述稀釋好的抗體加入到細胞中,100μL/孔,2-8度孵育0.5h;取出96孔板,250g離心5min,小心去上清後,加入FACS buffer 200μL/孔,再次250g離心5min,小心去上清;用FACS buffer配製PE熒光二抗(1:500稀釋),按100μL/孔加入對於的96孔板中,重懸細胞,2-8度孵育30min;取出96孔板,250g離心5min,小心去上清後,加入FACS buffer 200μL/孔,再次250g離心5min,小心去上清;用 1xPBS 100μL /孔重懸,FACS檢測。Antibody dilution: Use FACS buffer to dilute all molecules to an initial concentration of 400nM, volume 180μl, 3-fold gradient dilution (60+120), 10 concentrations; cell counting and plating: R0255-2 (CHO-mTigit)/293T-IL15R -28 Cells were centrifuged at 250g for 5 minutes and the supernatant was discarded. Use FACS buffer to adjust the cell density to 2E+06 and distribute 100 μL/tube evenly into a 96-well V-shaped plate. Add the above diluted antibodies to the cells at 100 μL/tube. well, incubate at 2-8 degrees for 0.5h; take out the 96-well plate, centrifuge at 250g for 5 minutes, carefully remove the supernatant, add 200 μL/well of FACS buffer, centrifuge again at 250g for 5 minutes, carefully remove the supernatant; use FACS buffer to prepare PE fluorescent secondary antibodies (1:500 dilution), add 100 μL/well to the corresponding 96-well plate, resuspend the cells, and incubate at 2-8 degrees for 30 minutes; take out the 96-well plate, centrifuge at 250g for 5 minutes, carefully remove the supernatant, and add 200 μL/FACS buffer well, centrifuge again at 250g for 5 minutes, carefully remove the supernatant; resuspend in 1xPBS 100μL/well, and detect by FACS.
結果如圖24、圖25所示; R0952(IL15、IL15RA換位)、R0960(減活)分子具有很低的IL15受體複合物結合活性; R0955(去糖基化)IL15活性下降;R0953、R0954共價連接後活性與R0951類似,說明對結構影響很小。The results are shown in Figure 24 and Figure 25; R0952 (IL15, IL15RA transposition), R0960 (inactivated) molecules have very low IL15 receptor complex binding activity; R0955 (deglycosylated) IL15 activity decreases; R0953, The activity of R0954 after covalent linkage is similar to that of R0951, indicating that it has little impact on the structure.
錯配分子R1042、R1043與R0951活性相當,說明沒有產生錯配,即使是錯誤的Fv也能表達出來;其中R0655為(IL15/IL15RFc融合蛋白,見SEQ ID NO:38) 實施例 12 、二硫鍵改造分子電泳檢測 The activities of the mismatched molecules R1042 and R1043 are equivalent to those of R0951, indicating that no mismatch occurs and even the wrong Fv can be expressed; among them, R0655 is (IL15/IL15RFc fusion protein, see SEQ ID NO: 38) Example 12 , disulfide Key modified molecular electrophoresis detection
對二硫鍵雙抗分子進行SDS-PAGE電泳檢測,結果如圖26所示,未進行二硫鍵改造的R1072分子在分子量25KD~35KD之間有條帶,說明存在游離輕鏈;配受體二硫鍵改造分子為R0954、R1085、R1086,其中R0954、R1086電泳結果顯示,仍有非共價輕鏈存在(25KD~35KD之間有條帶),R1085無非共價輕鏈存在(25KD~35KD之間無條帶),說明R1085二硫鍵改造成功。SDS-PAGE electrophoresis was performed on the disulfide bond double antibody molecule. The results are shown in Figure 26. The R1072 molecule without disulfide bond modification has a band between the molecular weight of 25KD and 35KD, indicating the presence of free light chain; ligand receptor The disulfide bond modified molecules are R0954, R1085, and R1086. The electrophoresis results of R0954 and R1086 show that there are still non-covalent light chains (bands between 25KD and 35KD), while R1085 has no non-covalent light chains (25KD and 35KD). There is no band between them), indicating that the R1085 disulfide bond transformation was successful.
輕重鏈二硫鍵改造分子為R1081、R1082、R1084,電泳結果顯示無非共價輕鏈存在(25KD~35KD之間無條帶),說明R1081、R1082、R1084二硫鍵改造成功。The light and heavy chain disulfide bond modified molecules are R1081, R1082, and R1084. The electrophoresis results show that there is no non-covalent light chain (no band between 25KD and 35KD), indicating that the disulfide bond modification of R1081, R1082, and R1084 was successful.
以上所述實施例的各技術特徵可以進行任意的組合,為使描述簡潔,未對上述實施例中的各個技術特徵所有可能的組合都進行描述,然而,只要這些技術特徵的組合不存在矛盾,都應當認為是本說明書記載的範圍。
實施例 13. IL15/IL15Rα 複合物 一. IL15 、 IL15Rα 之間設計二硫鍵 The technical features of the above-described embodiments can be combined in any way. To simplify the description, not all possible combinations of the technical features in the above-described embodiments are described. However, as long as there is no contradiction in the combination of these technical features, All should be considered to be within the scope of this manual. Example 13. IL15/
在IL15、IL15Rα之間設計二硫鍵改造,幫助非共價連接的IL15和IL15Rα之間形成共價二硫鍵鏈接,構建具有靶向性的IL15/IL15Rα複合物, IL15與IL15RA分子間二硫鍵突變配對立體結構示意圖見附圖27。示例性的,突變位點如下表:Design disulfide bond modification between IL15 and IL15Rα to help form covalent disulfide linkage between non-covalently linked IL15 and IL15Rα to construct a targeted IL15/IL15Rα complex. Intermolecular disulfide between IL15 and IL15RA The schematic diagram of the bond mutation pairing three-dimensional structure is shown in Figure 27. For example, the mutation sites are as follows:
表20. IL15/IL15Rα二硫鍵改造
示例性的選取一種IL15/IL15Rα複合物的使用場景:靶向抗原的重鏈可變區(VH)可變區通過Linker連接在IL15Rα上,再通過Hinge與抗體的Fc連接;靶向相同抗原的輕鏈可變區(VL)通過Linker連接在IL15上,製備一種具有靶向性的IL15/IL15Rα複合物。IL15/IL15Rα複合物結構示意圖見附圖28,示例性的,IL15/IL15Rα複合物氨基酸序列見下表21:An exemplary usage scenario of selecting an IL15/IL15Rα complex: the heavy chain variable region (VH) variable region targeting the antigen is connected to IL15Rα through a linker, and then connected to the Fc of the antibody through Hinge; targeting the same antigen The light chain variable region (VL) is connected to IL15 through a linker to prepare a targeted IL15/IL15Rα complex. The schematic structural diagram of the IL15/IL15Rα complex is shown in Figure 28. As an example, the amino acid sequence of the IL15/IL15Rα complex is shown in Table 21 below:
表21. IL15/IL15Rα複合物氨基酸序列
蛋白瞬轉表達:Protein transient expression:
將含有目的基因的質粒通過與轉染試劑PEI形成陽離子復合物後,導入到宿主細胞Expi293,質粒在細胞內期間,質粒上的外源基因在細胞內發生轉錄翻譯,從而得到目的蛋白。After the plasmid containing the target gene forms a cationic complex with the transfection reagent PEI, it is introduced into the host cell Expi293. While the plasmid is in the cell, the foreign gene on the plasmid is transcribed and translated in the cell to obtain the target protein.
Expi293在37℃、8%二氧化碳、130rpm條件培養,並在轉染前通過細胞計數,將2E6的細胞接種至1L搖瓶中,培養體系約為300ml。配製轉染複合物準備轉染:首先將750μg 目標質粒加入到含有15mlOpti-MEM試劑的50ml離心管中,輕輕混勻,標記為A管;將1.5mg轉染試劑PEI加入到含有15mlOpti-MEM試劑的50ml離心管中,輕輕混勻後,室溫孵育5min,標記為B管;將B管PEI稀釋液逐滴加入到A管DNA稀釋液中,輕輕混勻後,室溫孵育15min,孵育結束後,將PEI-目標質粒 複合物加入到Expi293細胞,置於37℃搖床中繼續培養。直到D7-D10後收樣。Expi293 was cultured at 37°C, 8% carbon dioxide, and 130 rpm, and the cells were counted before transfection. The 2E6 cells were inoculated into a 1L shake flask, and the culture system was about 300 ml. Prepare the transfection complex and prepare for transfection: first add 750 μg of target plasmid into a 50 ml centrifuge tube containing 15 ml Opti-MEM reagent, mix gently, and mark it as tube A; add 1.5 mg transfection reagent PEI into a 50 ml centrifuge tube containing 15 ml Opti-MEM reagent in a 50ml centrifuge tube, mix gently, and incubate at room temperature for 5 minutes, label it tube B; add the PEI diluent in tube B dropwise to the DNA diluent in tube A, mix gently, and incubate at room temperature for 15 minutes. , after the incubation, add the PEI-target plasmid complex to Expi293 cells and place them in a 37°C shaker to continue culturing. Samples were collected after D7-D10.
複合物樣品的純化:Purification of complex samples:
瞬轉細胞表達液經過9000rpm/20min離心,收集上清,再經過0.22μm濾膜除菌過濾。純化採用ProA親和層析。過程如下,使用AKTA avant 150層析設備,用至少5CV平衡緩衝液(10mM PBS)平衡層析柱(如MabSelectSuRe LX,GE),加載樣品至層析柱,使目標蛋白吸附在層析柱上而其他雜質穿透分離。完成上樣後使用至少5CV平衡緩衝液(10mM PBS)再次沖洗層析柱,隨後使用洗脫緩衝液(20mM NaAc,pH=3.4)洗脫目標蛋白,收集管中預先加入中和緩衝液(1M Tris,pH8.0),中和緩衝液的加入體積根據洗脫樣品的預估含量而定,一般加入10%洗脫體積量。
三. IL15/IL15Rα 複合物凝膠電泳檢測 The transiently transfected cell expression solution was centrifuged at 9000rpm/20min, the supernatant was collected, and then sterilized and filtered through a 0.22μm filter membrane. Purification was performed using ProA affinity chromatography. The process is as follows, use
對二硫鍵改造IL15/IL15Rα複合物進行SDS-PAGE電泳檢測,檢測結果如圖29所示,在分子量25KD~35KD之間有條帶,說明存在游離輕鏈;複合物1和復合物2(二硫鍵改造位置IL15(E90C)/IL15Rα(P67C))在分子量25KD~35KD之間無條帶,說明二硫鍵改造成功,複合物3(二硫鍵改造位置IL15(E87C)/IL15Rα(D96+C97))、複合物4(二硫鍵改造位置IL15(E93C)/IL15Rα(R35C))在分子量25KD~35KD之間有條帶,說明存在游離輕鏈,二硫鍵改造失敗。
四.靶向部分親和力檢測TIGIT端結合活性分析
The disulfide bond modified IL15/IL15Rα complex was detected by SDS-PAGE electrophoresis. The detection results are shown in Figure 29. There are bands between the molecular weight of 25KD and 35KD, indicating the presence of free light chains;
通過FCM實驗方法檢測雙抗分子(TIGIT端)與CHO-TIGIT細胞結合活性。配置3%BSA緩衝液:稱取4.5 gBSA到150mL 1XPBS中,混勻後放置冰上備用;抗體稀釋:將受試抗體、陽性對照用3%BSA稀釋成初始濃度為800nM,亞型對照稀釋成初始濃度為20μg/mL,體積300μL,3倍梯度稀釋(100+200)共10個點;結合活性檢測:細胞計數並鋪板:將R0254-3細胞計數後,按100μL,2E+05/孔分到96孔V型板中;先將不同濃度抗體50μL加入到細胞中,2-8度孵育0.5h,再加入50μL配體,2-8度孵育0.5h;350xg離心5min後,去掉上清,按200μL/孔3%BSA;350xg離心5min後,去掉上清,3%BSA配製熒光抗體PE Goat anti-human IgG Fc和PE Goat anti-mouse IgG Fc(1:500x稀釋),按100μL/孔加入對應的96孔板中,2-8度孵育30min;350g離心5min,去上清,3%BSA洗一遍細胞;350xg離心5min後,去掉上清,按100μL/孔加入1XPBS重懸細胞;按照CytoFLEX流式細胞儀標準操作規程上機檢測,檢測結果見圖30與未進行二硫鍵改造的分子相比親和力相當,說明二硫鍵改造不會影響靶向區的親和力。 PD-L1端結合活性分析 The binding activity between the double antibody molecule (TIGIT end) and CHO-TIGIT cells was detected by FCM experimental method. Configure 3% BSA buffer: weigh 4.5 gBSA into 150mL 1XPBS, mix well and place on ice for later use; antibody dilution: dilute the test antibody and positive control with 3% BSA to an initial concentration of 800nM, and dilute the subtype control to an initial concentration of 800nM. The initial concentration is 20 μg/mL, the volume is 300 μL, 3-fold gradient dilution (100+200), a total of 10 points; binding activity detection: cell counting and plating: after counting R0254-3 cells, divide into 100 μL, 2E+05/well into a 96-well V-type plate; first add 50 μL of antibodies of different concentrations to the cells, incubate at 2-8 degrees for 0.5 hours, then add 50 μL of ligand, and incubate at 2-8 degrees for 0.5 hours; centrifuge at 350xg for 5 minutes, remove the supernatant, Add 200 μL/well of 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, prepare fluorescent antibodies PE Goat anti-human IgG Fc and PE Goat anti-mouse IgG Fc (1:500x dilution) in 3% BSA, add 100 μL/well In the corresponding 96-well plate, incubate at 2-8 degrees for 30 minutes; centrifuge at 350g for 5 minutes, remove the supernatant, and wash the cells with 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, and add 1XPBS at 100 μL/well to resuspend the cells; follow CytoFLEX The flow cytometer standard operating procedures were tested on the machine. The test results are shown in Figure 30. Compared with the molecules without disulfide bond modification, the affinity is equivalent, indicating that the disulfide bond modification will not affect the affinity of the target region. PD-L1 terminal binding activity analysis
通過FCM實驗方法檢測雙抗分子(PD-L1端)與CHO-PD-L1細胞結合活性。配置3%BSA緩衝液:稱取4.5 gBSA到150mL 1XPBS中,混勻後放置冰上備用;抗體稀釋:將受試抗體、陽性對照用3%BSA稀釋成初始濃度為800nM,亞型對照稀釋成初始濃度為20μg/mL,體積300μL,3倍梯度稀釋(100+200)共10個點; 結合活性檢測:細胞計數並鋪板:將R0254-3細胞計數後,按100μL,2E+05/孔分到96孔V型板中;先將不同濃度抗體50μL加入到細胞中,2-8度孵育0.5h,再加入50μL配體,2-8度孵育0.5h;350xg離心5min後,去掉上清,按200μL/孔3%BSA;350xg離心5min後,去掉上清,3%BSA配製熒光抗體PE Goat anti-human IgG Fc和PE Goat anti-mouse IgG Fc(1:500x稀釋),按100μL /孔加入對應的96孔板中,2-8度孵育30min;350g離心5min,去上清,3%BSA洗一遍細胞;350xg離心5min後,去掉上清,按100μL/孔加入1XPBS重懸細胞;按照CytoFLEX流式細胞儀標準操作規程上機檢測。檢測結果見圖31與未進行二硫鍵改造的分子相比親和力相當,說明二硫鍵改造不會影響靶向區的親和力。The binding activity between the double antibody molecule (PD-L1 end) and CHO-PD-L1 cells was detected by FCM experimental method. Configure 3% BSA buffer: weigh 4.5 gBSA into 150mL 1XPBS, mix well and place on ice for later use; antibody dilution: dilute the test antibody and positive control with 3% BSA to an initial concentration of 800nM, and dilute the subtype control to an initial concentration of 800nM. The initial concentration is 20 μg/mL, the volume is 300 μL, 3-fold gradient dilution (100+200), a total of 10 points; Binding activity detection: Cell counting and plating: After counting R0254-3 cells, divide into 100 μL, 2E+05/well into a 96-well V-type plate; first add 50 μL of antibodies of different concentrations to the cells, incubate at 2-8 degrees for 0.5 hours, then add 50 μL of ligand, and incubate at 2-8 degrees for 0.5 hours; centrifuge at 350xg for 5 minutes, remove the supernatant, Add 200 μL/well of 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, prepare fluorescent antibodies PE Goat anti-human IgG Fc and PE Goat anti-mouse IgG Fc (1:500x dilution) in 3% BSA, add 100 μL/well In the corresponding 96-well plate, incubate at 2-8 degrees for 30 minutes; centrifuge at 350g for 5 minutes, remove the supernatant, and wash the cells with 3% BSA; centrifuge at 350xg for 5 minutes, remove the supernatant, and add 1XPBS at 100 μL/well to resuspend the cells; follow CytoFLEX Flow cytometer standard operating procedures for on-machine testing. The test results are shown in Figure 31. Compared with the molecule without disulfide bond modification, the affinity is equivalent, indicating that disulfide bond modification will not affect the affinity of the targeting region.
本發明實施例中提及的其它相關蛋白的序列:Sequences of other related proteins mentioned in the examples of the present invention:
序列36:@PD-L1:VH (SEQ ID NO:36) EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYIMMWVRQAPGKGLEWVSSIYPSGGITFYADTVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARIKLGTVTTVDYWGQGTLVTVSS Sequence 36:@PD-L1:VH (SEQ ID NO:36) EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYIMMWVRQAPGKGLEWVSSIYPSGGITFYADTVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARIKLGTVTTVDYWGQGTLVTVSS
序列37:@PD-L1:VL (SEQ ID NO:37) QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL Sequence 37:@PD-L1:VL (SEQ ID NO:37) QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL
R0655氨基酸序列:(SEQ ID NO:38) EPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLHNHHTTKSFSRTPGAGGGGSGGGGSGGGGSGGGGSGITCPPPMSVEHADIWVKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCIRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTSGGSGGGGSGGGSGGGGSLQNWVNVISDLKKIEDLIQSMHIDATLYTESDVHPSCKVTAMKCFLLELQVISLESGDASIHDTVENLIILANDSLSSNGNVTESGCKECEELEEKNIKEFLQSFVHIVQMFINTS R0655 amino acid sequence: (SEQ ID NO:38) EPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVER NSYSCSVVHEGLHNHHTTKSFSRTPGAGGGGSGGGGSGGGGSGGGGSGITCPPPMSVEHADIWVKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCIRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTTSGGSG GGGSGGGSGGGGSLQNWVNVISDLKKIEDLIQSMHIDATLYTESDVHPSCKVTAMKCFLLELQVISLESGDASIHDTVENLIILANDSLSSNGNVTESGCKECEELEEKNIKEFLQSFVHIVQMFINTS
R0968 PD-L1 VH氨基酸序列:(SEQ ID NO:71) QVQLQESGPGLVKPSETLSLTCAVYGDSITSGYWNWIRKPPGKCLEYIGYISYTGSTYQNPSLKSRITMSRDTSKNQYYLKLSSVTAADTAVYYCARSRAWIRTYFDYWGQGTLVTVSS R0968 PD-L1 VH amino acid sequence: (SEQ ID NO:71) QVQLQESGPGLVKPSETLSLTCAVYGDSITSGYWNWIRKPPGKCLEYIGYISYTGSTYQNPSLKSRITMSRDTSKNQYYLKLSSVTAADTAVYYCARSRAWIRTYFDYWGQGTLVTVSS
R0968 PD-L1 VL氨基酸序列:(SEQ ID NO:72) DIQMTQSPSSLSASVGDRVTITCSVSSSISSSNLHWYQQKPGKAPKPWIYGTSNLASGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQWSSYPLTFGCGTKLEIK R0968 PD-L1 VL amino acid sequence: (SEQ ID NO:72) DIQMTQSPSSSLSASVGDRVTITCSVSSSISSSNLHWYQQKPGKAPKPWIYGTSNLASGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQWSSYPLTFGCGTKLEIK
R0774 TIGIT VH氨基酸序列:(SEQ ID NO:73) QVQLVQSGAEVKKPGSSVKVSCKASGYSFTSYWMNWVRQAPGQGLEWIGMIRPSDSETRLNQMFKDRVTITVDKSTSTAYMELSSLRSEDTAVYYCAGIHDYGHGAYWGQGTLVTVSS R0774 TIGIT VH amino acid sequence: (SEQ ID NO:73) QVQLVQSGAEVKKPGSSVKVSCKASGYSFTSYWMNWVRQAPGQGLEWIGMIRPSDSETRLNQMFKDRVTITVDKSTSTAYMELSSLRSEDTAVYYCAGIHDYGHGAYWGQGTLVTVSS
R0774 TIGIT VL氨基酸序列:(SEQ ID NO:74) DIQMTQSPSSLSASVGDRVTITCRASENIYSNLAWYQQKPGKSPKLLVYAASHLPDGVPSRFSGSGSGTDYSLTISSLQPEDFATYYCQHFWGTPRTFGQGTKLEIK R0774 TIGIT VL amino acid sequence: (SEQ ID NO:74) DIQMTQSPSSSLSASVGDRVTITCRASENIYSNLAWYQQKPGKSPKLLVYAASHLPDGVPSRFSGSGSGTDYSLTISSLQPEDFATYYCQHFWGTPRTFGQGTKLEIK
R0919 PD-L1 VH氨基酸序列:(SEQ ID NO:75) EVQLQESGPGLVKPSETLSLTCAVYGDSITSGYWNWIRKPPGKGLEYMGYISYTGSTYQNPSLKSRITFSRDTSKNQYYLKLSSVTAADTATYYCARSRAWIRTYFDYWGQGTLVTVSS R0919 PD-L1 VH amino acid sequence: (SEQ ID NO:75) EVQLQESGPGLVKPSETLSLTCAVYGDSITSGYWNWIRKPPGKGLEYMGYISYTGSTYQNPSLKSRITFSRDTSKNQYYLKLSSVTAADTATYYCARSRAWIRTYFDYWGQGTLVTVSS
R0919 PD-L1 VL氨基酸序列:(SEQ ID NO:76) EIVLTQSPDFQSVTPKEKVTITCSVSSSISSSNLHWYQQKPDQSPKLLIYGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCQQWSSYPLTFGQGTKLEIK R0919 PD-L1 VL amino acid sequence: (SEQ ID NO:76) EIVLTQSPDFQSVTPKEKVTITCSVSSSISSSNLHWYQQKPDQSPKLLIYGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCQQWSSYPLTFGQGTKLEIK
無without
圖1為4種經典的雙抗平台:圖1A為KiH異源二聚Fc改造技術;圖1B為CrossMab雙特異性抗體技術;圖1C為武漢友芝友YBody雙抗技術(非對稱型scFv雙抗);圖1D為對稱型scFv雙抗; 圖2為本發明提供的一種新型雙特性抗體FiBody,由具有特異性親和力的配受體替換一側Fab的CH1、CL; 圖3為示例性的展示FiBody的4中可行方案:圖3-1為改造的配受體,配受體之間具有非天然存在的鏈間鍵;圖3-2為兩側Fab的CH1、CL均被受體、配體取代,兩側選自不同的配受體;圖3-3為抗體除一側Fab的CH1、CL被配受體替換,Fc二聚體中CH3段也被配受體替換;圖3-4為抗體除一側Fab的CH1、CL被配受體替換,Fc二聚體中CH2也被配受體替換;其他的可行性改造方式還有很多; 圖4為示例性的當本發明的雙特異性抗體用於治療腫瘤時,雙特異性抗體的抗原結合部分的靶向結合包括示例性的3種類型:圖4-A第一抗原結合部分靶向T細胞,第二抗原結合部分靶向腫瘤細胞;圖4-B第一抗原結合部分和第二抗原結合部分均靶向腫瘤細胞;圖4-C第一抗原結合部分與第二抗原結合部分均靶向T細胞;圖4-D示例性的體現本發明雙特性抗體可選的為三功能融合蛋白,除發揮不同的抗原結合,還能激活配受體通路,激發配受體生物學活性; 圖5為白細胞介素及其受體的立體構像圖,可以分為四類:A類為托舉型,B類為蝴蝶結型,C類為棒球手型,D類為鉗型; 圖6為四類立體構像的白介素及其受體的舉例,A類托舉型為IL2/ IL2R,B類蝴蝶結型為IL22/IL22R,C類蝴蝶結型為IL18/IL18R,D類鉗型為IL21/IL21R; 圖7為本發明實施例中基於IL15(配體)與IL15RA(受體)FiBody設計,第二抗原結合區VH與IL15RA相連,第二抗原結合區VL與IL15相連; 圖8為二硫鍵改造優化結構示意圖; 圖9為IL15/IL15RA與IL2/15Rβ/γC複合物相互作用立體結構示意圖; 圖10為本發明實施例中錯配分子R1042/R1124結構示意圖; 圖11為本發明實施例中樣品R0951的HPLC-SEC檢測結果; 圖12為本發明實施例中樣品R1042的HPLC-SEC檢測結果; 圖13為本發明實施例中樣品R0809的HPLC-SEC檢測結果; 圖14為本發明實施例中樣品R1110的HPLC-SEC檢測結果; 圖15為本發明實施例中FCM法檢測雙抗TIGIT端與CHO-Tigit細胞結合活性(R0950、R0951、R0952、R0954、R0955、R0960); 圖16為本發明實施例中FCM法檢測雙抗TIGIT端與CHO-Tigit細胞結合活性(R1123/R1119/ R1120/ R1124); 圖17為本發明實施例中FCM法檢測雙抗TIGIT端與CHO-Tigit細胞結合活性(R1042/R1043); 圖18為本發明實施例中FCM法檢測雙抗TIGIT端與CHO-Tigit細胞結合活性(R0810); 圖19為本發明實施例中FCM法檢測雙抗PD-L1端與CHO- PD-L1細胞結合活性(R0950、 R0951、R0952、R0954、R0955、R0960); 圖20為本發明實施例中FCM法檢測雙抗PD-L1端與CHO- PD-L1細胞結合活性(R1072、R1115-R1120、R1123-R1124); 圖21為本發明實施例中FCM法檢測雙抗PD-L1端與CHO- PD-L1細胞結合活性(R0950、R1042、R1043); 圖22為本發明實施例中FCM法檢測雙抗PD-L1端與CHO- PD-L1細胞結合活性(R1072、R1081-R1086); 圖23為本發明實施例中FCM法檢測雙抗PD-L1端與CHO- PD-L1細胞結合活性(R1072、R1109-R1111); 圖24為本發明實施例中樣品受配體複合物(IL15/IL15R)的結合活性(R0950、 R0951、R0952、R0954、R0955、R0960); 圖25為本發明實施例中樣品受配體複合物(IL15/IL15R)的結合活性(R1042、R1043); 圖26為本發明實施例中二硫鍵改造優化樣品凝膠電泳檢測結果(R1072、R1081、R1082、R0954、R1084-R1086) 圖27為IL15(配體)與IL15RA(受體)分子間二硫鍵突變配對立體結構示意圖; 圖28為示例性的IL15/IL15Rα複合物結構示意圖; 圖29為複合物1-4凝膠電泳檢測結果; 圖30為IL15/IL15Rα複合物對靶向區結合力(@TIGIT)的檢測結果; 圖31為IL15/IL15Rα複合物對靶向區結合力(@PD-L1)的檢測結果。 Figure 1 shows four classic double antibody platforms: Figure 1A shows KiH heterodimeric Fc transformation technology; Figure 1B shows CrossMab bispecific antibody technology; Figure 1C shows Wuhan Youzhiyou YBody double antibody technology (asymmetric scFv double antibody technology). Antibody); Figure 1D shows symmetric scFv double antibody; Figure 2 is a novel bispecific antibody FiBody provided by the present invention, which replaces CH1 and CL of one side of the Fab with a ligand with specific affinity; Figure 3 is an example showing the four possible solutions of FiBody: Figure 3-1 is a modified ligand receptor with non-naturally occurring inter-chain bonds between the ligand receptors; Figure 3-2 shows the CH1 and CH1 of the Fab on both sides. CL is replaced by receptors and ligands, and both sides are selected from different ligands; Figure 3-3 shows the CH1 and CL of the Fab on one side of the antibody are replaced by ligands, and the CH3 segment in the Fc dimer is also liganded. Receptor replacement; Figure 3-4 shows that CH1 and CL of the Fab on one side of the antibody are replaced by ligand receptors, and CH2 in the Fc dimer is also replaced by ligand receptors; there are many other feasible transformation methods; Figure 4 is an exemplary example. When the bispecific antibody of the present invention is used to treat tumors, the target binding of the antigen-binding portion of the bispecific antibody includes three exemplary types: Figure 4-A First antigen-binding portion target To T cells, the second antigen-binding part targets tumor cells; Figure 4-B The first antigen-binding part and the second antigen-binding part both target tumor cells; Figure 4-C The first antigen-binding part and the second antigen-binding part Both target T cells; Figure 4-D illustrates the exemplary embodiment of the bispecific antibody of the present invention, which can be a trifunctional fusion protein. In addition to exerting different antigen binding functions, it can also activate the ligand receptor pathway and stimulate the biological activity of the ligand receptor. ; Figure 5 shows the three-dimensional conformation of interleukins and their receptors, which can be divided into four categories: type A is the lift type, type B is the bowtie type, type C is the baseball hand type, and type D is the clamp type; Figure 6 shows examples of four types of interleukins and their receptors in three-dimensional configurations. Type A push-up type is IL2/IL2R, type B bow-tie type is IL22/IL22R, type C bow-tie type is IL18/IL18R, and type D clamp type is IL21/IL21R; Figure 7 is a FiBody design based on IL15 (ligand) and IL15RA (receptor) in an embodiment of the present invention. The second antigen-binding region VH is connected to IL15RA, and the second antigen-binding region VL is connected to IL15; Figure 8 is a schematic diagram of the structure optimized by disulfide bond modification; Figure 9 is a schematic diagram of the three-dimensional structure of the interaction between IL15/IL15RA and IL2/15Rβ/γC complex; Figure 10 is a schematic structural diagram of the mismatched molecule R1042/R1124 in an embodiment of the present invention; Figure 11 is the HPLC-SEC detection result of sample R0951 in the embodiment of the present invention; Figure 12 is the HPLC-SEC detection result of sample R1042 in the embodiment of the present invention; Figure 13 is the HPLC-SEC detection result of sample R0809 in the embodiment of the present invention; Figure 14 is the HPLC-SEC detection result of sample R1110 in the embodiment of the present invention; Figure 15 shows the FCM method in the embodiment of the present invention to detect the binding activity of the double antibody TIGIT end to CHO-Tigit cells (R0950, R0951, R0952, R0954, R0955, R0960); Figure 16 shows the FCM method in the embodiment of the present invention to detect the binding activity of the double antibody TIGIT end to CHO-Tigit cells (R1123/R1119/R1120/R1124); Figure 17 shows the FCM method in the embodiment of the present invention to detect the binding activity of the TIGIT end of the double antibody to CHO-Tigit cells (R1042/R1043); Figure 18 shows the FCM method in the embodiment of the present invention to detect the binding activity between the TIGIT end of the double antibody and CHO-Tigit cells (R0810); Figure 19 shows the FCM method in the embodiment of the present invention to detect the binding activity of the dual antibody PD-L1 end to CHO-PD-L1 cells (R0950, R0951, R0952, R0954, R0955, R0960); Figure 20 shows the FCM method in the embodiment of the present invention to detect the binding activity of the dual antibody PD-L1 end to CHO-PD-L1 cells (R1072, R1115-R1120, R1123-R1124); Figure 21 shows the FCM method in the embodiment of the present invention to detect the binding activity of the dual antibody PD-L1 terminal to CHO-PD-L1 cells (R0950, R1042, R1043); Figure 22 shows the FCM method in the embodiment of the present invention to detect the binding activity of the dual antibody PD-L1 terminal to CHO-PD-L1 cells (R1072, R1081-R1086); Figure 23 shows the FCM method in the embodiment of the present invention to detect the binding activity of the dual antibody PD-L1 terminal to CHO-PD-L1 cells (R1072, R1109-R1111); Figure 24 shows the binding activity (R0950, R0951, R0952, R0954, R0955, R0960) of the sample receptor ligand complex (IL15/IL15R) in the example of the present invention; Figure 25 shows the binding activity (R1042, R1043) of the sample receptor ligand complex (IL15/IL15R) in the example of the present invention; Figure 26 shows the gel electrophoresis detection results of disulfide bond modified and optimized samples in the embodiment of the present invention (R1072, R1081, R1082, R0954, R1084-R1086) Figure 27 is a schematic diagram of the three-dimensional structure of the mutated disulfide bond between IL15 (ligand) and IL15RA (receptor) molecules; Figure 28 is a schematic structural diagram of an exemplary IL15/IL15Rα complex; Figure 29 shows the gel electrophoresis detection results of complex 1-4; Figure 30 shows the detection results of the binding ability of IL15/IL15Rα complex to the targeting region (@TIGIT); Figure 31 shows the detection results of the binding ability of IL15/IL15Rα complex to the targeting region (@PD-L1).
TW202321315A_111136248_SEQL.xmlTW202321315A_111136248_SEQL.xml
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