TW202030327A - Ornithine decarboxylase variants,methods for producing putrescine using the same, polynucleotide, microorganism, method for preparing polyamine, and composition for preparing polyamide - Google Patents

Ornithine decarboxylase variants,methods for producing putrescine using the same, polynucleotide, microorganism, method for preparing polyamine, and composition for preparing polyamide Download PDF

Info

Publication number
TW202030327A
TW202030327A TW108147355A TW108147355A TW202030327A TW 202030327 A TW202030327 A TW 202030327A TW 108147355 A TW108147355 A TW 108147355A TW 108147355 A TW108147355 A TW 108147355A TW 202030327 A TW202030327 A TW 202030327A
Authority
TW
Taiwan
Prior art keywords
seq
ornithine decarboxylase
amino acid
butanediamine
polypeptide
Prior art date
Application number
TW108147355A
Other languages
Chinese (zh)
Other versions
TWI756604B (en
Inventor
李在軒
文熹秀
全愛智
梁榮烈
金秉褀
洪銀姈
Original Assignee
南韓商Cj第一製糖股份有限公司
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by 南韓商Cj第一製糖股份有限公司 filed Critical 南韓商Cj第一製糖股份有限公司
Publication of TW202030327A publication Critical patent/TW202030327A/en
Application granted granted Critical
Publication of TWI756604B publication Critical patent/TWI756604B/en

Links

Images

Abstract

The present application relates to: an ornithine decarboxylase or a protein variant thereof; a polynucleotide encoding same; a microorganism containing same; and a method for producing putrescine by using same. The present invention achieves effects of increasing the productivity, production efficiency or production selectivity of putrescine, and reducing costs during putrescine purification by suppressing side reactions.

Description

鳥胺酸脫羧酶變異體以及使用其製造丁二胺之方法Ornithine decarboxylase variant and method for producing butanediamine using it

本申請案是有關於一種鳥胺酸脫羧酶變異體、編碼鳥胺酸脫羧酶變異體的基因、包括鳥胺酸脫羧酶變異體的微生物及利用其進行的丁二胺合成。This application relates to a variant of ornithine decarboxylase, a gene encoding the ornithine decarboxylase variant, microorganisms including the ornithine decarboxylase variant, and the synthesis of butanediamine using the same.

本申請案主張基於在2018年12月28日申請的台灣專利申請案第107147749號的優先權的利益,該專利申請案的文獻中所揭示的所有內容包括作本說明書的一部分。This application claims the benefit of priority based on Taiwan Patent Application No. 107147749 filed on December 28, 2018, and all the contents disclosed in the documents of this patent application are included as part of this specification.

丁二胺(putrescine,1,4-diamino-butane)雖為導致腐爛的有機體產生惡臭的物質,但可用於合成4,6-尼龍,因此於工業上進行生產。目前,因石油資源而每年生產10,000噸以上的丁二胺,但因石油價格頻繁變動而存在原料供需不穩定的問題。另外,存在因於生產過程中生成大量的毒性物質而會導致環境污染的問題。Putrescine (1,4-diamino-butane) is a substance that causes rotten organisms to produce malodor, but it can be used to synthesize 4,6-nylon, so it is industrially produced. At present, more than 10,000 tons of butanediamine are produced annually due to petroleum resources, but there is a problem of unstable supply and demand of raw materials due to frequent changes in petroleum prices. In addition, there is a problem of environmental pollution due to the production of large amounts of toxic substances during the production process.

為瞭解決此種問題,最近正在積極地研究來自生物的丁二胺的合成。例如,正在對自來自生物的鳥胺酸合成丁二胺或利用糖自微生物大量生產丁二胺的方法進行研究。In order to solve this problem, the synthesis of bio-derived butanediamine is being actively studied recently. For example, research is under way to synthesize butanediamine from ornithine derived from organisms or to mass-produce butanediamine from microorganisms using sugar.

就自微生物生產丁二胺的方法而言,一直以來使用用以增加丁二胺的產量的各種生物學工程方法。上述方法可為如下者:例如,利用啟動子調節參與丁二胺的生物合成的酶的活性;過度表現反向轉運體以容易地向細胞外釋出丁二胺;或阻斷分解丁二胺的路徑。其中,已知調節微生物內的參與丁二胺的生物合成的酶的活性大幅有助於增加丁二胺的產量。Regarding the method of producing butanediamine from microorganisms, various biological engineering methods to increase the production of butanediamine have been used. The above method may be the following: for example, using a promoter to regulate the activity of an enzyme involved in the biosynthesis of butanediamine; overexpression of antiporters to easily release butanediamine to the outside of the cell; or blocking the decomposition of butanediamine route of. Among them, it is known that regulating the activity of enzymes involved in the biosynthesis of butanediamine in microorganisms greatly contributes to increasing the production of butanediamine.

鳥胺酸脫羧酶作為切割鳥胺酸的末端羧基而合成丁二胺的酶,其是於丁二胺的生物合成中執行重要作用的酶之一。然而,鳥胺酸脫羧酶不僅自鳥胺酸合成丁二胺,而且同時具有自離胺酸合成為戊二胺(1,5-diamino-pentane)的活性(副反應),故而於提高其活性的情形時,會連同丁二胺一併生成 戊二胺而降低丁二胺的產量。上述戊二胺於精製丁二胺時亦會導致許多問題。具體而言,於藉由蒸餾方法精製微生物培養液的過程中,由於丁二胺(H2 N(CH2 )4 NH2 )與戊二胺(H2 N(CH2 )5 NH2 )的結構非常相似,故而為了選擇性地精製上述微生物培養液而花費較多的費用及時間。Ornithine decarboxylase is an enzyme that cleaves the terminal carboxyl group of ornithine to synthesize butanediamine, and it is one of the enzymes that performs an important role in the biosynthesis of butanediamine. However, ornithine decarboxylase not only synthesizes butanediamine from ornithine acid, but also has the activity of synthesizing lysine into 1,5-diamino-pentane (side reaction), so its activity is improved In this case, it will produce pentane diamine together with butane diamine and reduce the yield of butane diamine. The above-mentioned pentamethylene diamine can also cause many problems when refining butanediamine. Specifically, in the process of purifying microbial culture broth by distillation, due to the combination of butanediamine (H 2 N(CH 2 ) 4 NH 2 ) and pentane diamine (H 2 N(CH 2 ) 5 NH 2 ) The structure is very similar, so it takes a lot of cost and time to selectively refine the above-mentioned microorganism culture solution.

因此,於欲調節鳥胺酸脫羧酶的活性的情形時,非常重要的是保持自鳥胺酸合成丁二胺的活性,並且降低自離胺酸合成為戊二胺的活性(副反應)。Therefore, when the activity of ornithine decarboxylase is to be adjusted, it is very important to maintain the activity of synthesizing butanediamine from ornithine and to reduce the activity of synthesizing pentanediamine from lysine (side reaction).

因此,本發明者等人發掘出新穎的鳥胺酸脫羧酶,藉由確認上述鳥胺酸脫羧酶中戊二胺的合成活性較低且丁二胺的合成活性較高而完成本申請案。Therefore, the inventors discovered a novel ornithine decarboxylase, and completed the application by confirming that the synthetic activity of pentane diamine is low and the synthesis activity of butanediamine is high among the above-mentioned ornithine decarboxylase.

[發明欲解決的課題][The problem to be solved by the invention]

本申請案提供一種鳥胺酸脫羧酶或其變異體。This application provides an ornithine decarboxylase or a variant thereof.

另外,本申請案提供一種編碼上述鳥胺酸脫羧酶或其變異體的聚核苷酸。In addition, this application provides a polynucleotide encoding the above-mentioned ornithine decarboxylase or a variant thereof.

本申請案提供一種生產包括上述鳥胺酸脫羧酶或其變異體的丁二胺的微生物。This application provides a microorganism that produces butanediamine including the above-mentioned ornithine decarboxylase or a variant thereof.

本申請案的又一目的在於提供一種包括於培養基培養上述微生物的步驟的丁二胺生產方法。Another object of the present application is to provide a method for producing butanediamine including the step of culturing the above-mentioned microorganism in a medium.

本申請案的又一目的在於提供一種包括於培養基培養上述微生物的步驟的增加丁二胺的純度的方法。Another object of the present application is to provide a method for increasing the purity of butanediamine including the step of culturing the above-mentioned microorganism in a medium.

本申請案的又一目的在於提供一種包括於培養基培養上述微生物的步驟的增加丁二胺相對於戊二胺的比率的方法。Another object of the present application is to provide a method for increasing the ratio of butanediamine to pentamethylenediamine that includes the step of culturing the above-mentioned microorganism in a medium.

而且,本申請案的又一目的在於提供一種上述丁二胺合成聚醯胺類聚合物的用途。 [解決課題的手段]Moreover, another objective of the present application is to provide a use of the above-mentioned butanediamine to synthesize polyamide polymers. [Means to solve the problem]

若具體地對其進行說明,則如下。另一方面,本申請案中所揭示的各者的說明及實施方式亦可適用於各者的其他說明及實施方式。即,本申請案中所揭示的各種要素的所有組合屬於本申請案的範疇。另外,本申請案的範疇並不限制於以下所記述的具體敍述。If this is specifically described, it will be as follows. On the other hand, each of the descriptions and embodiments disclosed in this application can also be applied to the other descriptions and embodiments of each. That is, all combinations of various elements disclosed in this application belong to the scope of this application. In addition, the scope of this application is not limited to the specific description described below.

本申請案的一實施方式提供一種鳥胺酸脫羧酶變異體,具有於SEQ ID NO:1的胺基酸序列中包括一個以上的胺基酸取代的丁二胺生產活性。One embodiment of the present application provides a variant of ornithine decarboxylase, which has an amino acid sequence of SEQ ID NO: 1 including more than one amino acid substituted butanediamine production activity.

具體而言,本申請案提供一種蛋白質的變異體,於SEQ ID NO:1的胺基酸序列中,i)作為第713個胺基酸的丙胺酸由其他胺基酸取代及/或ii)作為第698個胺基酸的麩胺酸由其他胺基酸取代。上述胺基酸取代可包括:i)作為第713個胺基酸的丙胺酸由選自白胺酸、異白胺酸、纈胺酸、精胺酸、天冬胺酸、色胺酸及麩醯胺酸中的胺基酸取代;及/或ii)作為第698個胺基酸的麩胺酸由天冬胺酸取代。Specifically, this application provides a protein variant. In the amino acid sequence of SEQ ID NO:1, i) the alanine as the 713th amino acid is substituted with other amino acids and/or ii) The glutamic acid, which is the 698th amino acid, is substituted with another amino acid. The above amino acid substitution may include: i) Alanine as the 713th amino acid is selected from leucine, isoleucine, valine, arginine, aspartic acid, tryptophan and gluten The amino acid in the amino acid is substituted; and/or ii) the glutamic acid as the 698th amino acid is substituted by aspartic acid.

於本申請案中,用語"丁二胺"作為藉由鳥胺酸的脫羧反應或精胺的水解而生成的物質,雖亦存在於腐爛物中,但作為正常的成分廣泛分佈於生物體。作為多元胺的一種,具有構成核糖體,促進細胞生長或促進核糖核酸(Ribonucleic Acid,RNA)合成的功能。特別是,於工業上為用以生產包括尼龍4、尼龍6的聚醯胺4、聚醯胺6的重要的原料物質,且為仍需進行量產研究的物質。In this application, the term "butanediamine" is a substance produced by the decarboxylation reaction of ornithine acid or the hydrolysis of spermine. Although it is also present in decay, it is widely distributed in organisms as a normal component. As a kind of polyamine, it has the function of forming ribosomes, promoting cell growth or promoting ribonucleic acid (RNA) synthesis. In particular, it is an important raw material for the production of polyamide 4 and polyamide 6 including nylon 4 and nylon 6, and is a substance that still needs to be mass-produced.

可藉由使用鳥胺酸作為基質的方法生產丁二胺。另外,可於使用成為鳥胺酸的前驅物的物質作為基質合成鳥胺酸後,自該鳥胺酸生產丁二胺。只要鳥胺酸的合成為可由業者容易地選擇者,則可無限制地使用。Butanediamine can be produced by using ornithine as a substrate. In addition, after synthesizing ornithine using a substance that becomes a precursor of ornithine acid as a substrate, butanediamine can be produced from the ornithine acid. As long as the synthesis of ornithine acid can be easily selected by the manufacturer, it can be used without limitation.

於本申請案中,用語"鳥胺酸"是於鳥胺酸循環中發揮重要作用的鹼性胺基酸,特別是L-鳥胺酸廣泛發現於植物、動物、微生物中。通常,於具有鳥胺酸循環的生物體內,與要素生產相關而於代謝上發揮重要的作用。另外,可於生物體內與精胺酸、麩胺酸、脯胺酸相互轉化,傳遞酮酸、乙醛酸及胺基。作為藉由鳥胺酸脫羧酶生成胺(丁二胺)的基質,由其合成為多元胺。於本發明中,特別是可為可用作鳥胺酸脫羧酶的基質的L-鳥胺酸。In this application, the term "ornithine" is a basic amino acid that plays an important role in the ornithine cycle, especially L-ornithine is widely found in plants, animals, and microorganisms. Generally, in organisms with ornithine acid cycle, it is related to element production and plays an important role in metabolism. In addition, it can mutually transform with arginine, glutamine, and proline in the living body to transfer keto acid, glyoxylic acid and amino groups. As a substrate for the production of amine (butanediamine) by ornithine decarboxylase, it is synthesized into polyamines. In the present invention, L-ornithine is particularly useful as a substrate for ornithine decarboxylase.

於本申請案中,用語"鳥胺酸脫羧酶(ornithine decarboxylase,ODC)"是促進作為合成多元胺時的最初步驟及丁二胺(putrescine)生產路徑中的最後步驟的下述反應式的酶。於本申請案中,鳥胺酸脫羧酶可與鳥胺酸去羧酶(ornithine decarboxylase)混用。ODC以L-鳥胺酸為基質生產丁二胺,磷酸吡哆醛(Pyridoxal phosphate,PLP)作為輔助因子(co-factor)發揮作用。In this application, the term "ornithine decarboxylase (ODC)" is an enzyme that promotes the following reaction formula as the first step in the synthesis of polyamines and the last step in the production route of putrescine . In this application, ornithine decarboxylase can be mixed with ornithine decarboxylase. ODC uses L-ornithine as a substrate to produce butanediamine, and Pyridoxal phosphate (PLP) acts as a co-factor.

[反應式][Reaction formula]

L-鳥胺酸>=>丁二胺+CO2 L-ornithine>=>butanediamine+CO 2

圖1表示利用鳥胺酸脫羧酶以鳥胺酸為基質合成丁二胺的過程的化學反應式。另外,表示需抑制的鳥胺酸脫羧酶的副反應即戊二胺(cadaverine)合成路徑。Figure 1 shows the chemical reaction formula of the process of synthesizing butanediamine using ornithine as a substrate using ornithine decarboxylase. In addition, it indicates the side reaction of ornithine decarboxylase that needs to be inhibited, that is, the cadaverine synthesis pathway.

於本申請案中,獲得ODC(ornithine decarboxylase)的方法可應用本領域中熟知的各種方法。作為該方法的示例,可基於包括以可於通常廣泛用於酶表現的微生物中以高效率獲得酶的方式進行密碼子最佳化的基因合成技術及微生物的大量基因組資訊,利用生物資訊學方法而藉由對有用的酶資源進行篩選的方法獲得,且不限制於此。In this application, the method for obtaining ODC (ornithine decarboxylase) can be applied to various methods well known in the art. As an example of this method, a bioinformatics method can be used based on gene synthesis technology including codon optimization in a way that can obtain enzymes with high efficiency in microorganisms that are generally widely used for enzyme expression, and a large amount of genomic information of microorganisms. It is obtained by screening useful enzyme resources and is not limited to this.

於本申請案中,SEQ ID NO:1是指具有丁二胺生產活性的鳥胺酸脫羧酶的胺基酸序列。上述SEQ ID NO:1的胺基酸序列可自作為公知的資料庫的美國國家生物技術資訊中心(National Center for Biotechnology Information,NCBI)的基因庫(GenBank)其序列。作為一例,鳥胺酸脫羧酶可來自乳桿菌屬(Lactobacillus sp.)、酵母屬(Saccharomyces sp.)或大腸桿菌(Escherichia coli,E. coli),具體而言,可來自雞源乳桿菌(Lactobacillus saerimneri),但並不限制於此,只要為具有與包括上述胺基酸序列的蛋白質相同的活性的蛋白質的胺基酸序列,則可無限制地包括。另外,作為本申請案中的具有丁二胺生產活性的鳥胺酸脫羧酶,記載了包括SEQ ID NO:1的胺基酸序列的蛋白質,但並不排除於SEQ ID NO:1的胺基酸序列前後無意義地追加序列或可自然發生的突變、或者其潛伏性突變(silent mutation),只要為具有與包括SEQ ID NO:1的胺基酸序列的蛋白質彼此相同或相應的活性的情形,則業者明白相當於具有本申請案的丁二胺的活性的蛋白質。具體而言,例如本申請案的具有丁二胺生產活性的蛋白質可為由SEQ ID NO:1的胺基酸序列、或與其具有80%、85%、90%、95%、96%、97%、98%或99%以上的同源性或一致性的胺基酸序列構成的蛋白質。另外,只要為具有此種同源性或一致性且表現出與上述蛋白質相應的功效的胺基酸序列,則應明白具有一部分序列缺失、變形、經取代或加成的胺基酸序列的蛋白質亦包括於成為本申請案的變異對象的蛋白質的範圍內。In this application, SEQ ID NO: 1 refers to the amino acid sequence of ornithine decarboxylase with butanediamine production activity. The amino acid sequence of SEQ ID NO: 1 can be obtained from the GenBank of the National Center for Biotechnology Information (NCBI), which is a well-known database. As an example, ornithine decarboxylase can be derived from Lactobacillus sp., Saccharomyces sp. or Escherichia coli (E. coli), specifically, it can be derived from Lactobacillus sp. saerimneri), but it is not limited to this, as long as it is an amino acid sequence of a protein having the same activity as the protein including the above-mentioned amino acid sequence, it may be included without limitation. In addition, as the ornithine decarboxylase with butanediamine production activity in the present application, a protein including the amino acid sequence of SEQ ID NO:1 is described, but it is not excluded from the amino acid sequence of SEQ ID NO:1 A meaningless addition to the sequence before and after the acid sequence, a mutation that can occur naturally, or a silent mutation thereof, as long as it has the same or corresponding activity as the protein including the amino acid sequence of SEQ ID NO:1 , The industry understands that it is equivalent to the protein with the activity of butanediamine in this application. Specifically, for example, the protein with butanediamine production activity of the present application may be the amino acid sequence of SEQ ID NO:1, or 80%, 85%, 90%, 95%, 96%, 97 %, 98% or 99% homology or identity of the amino acid sequence of the protein. In addition, as long as it is an amino acid sequence that has such homology or identity and exhibits functions corresponding to the above-mentioned protein, it should be understood that a protein has an amino acid sequence in which a part of the sequence is deleted, deformed, substituted, or added. It is also included in the scope of the protein to be the subject of mutation in this application.

即,於本申請案中,即便記載有"具有以特定SEQ ID NO記載的胺基酸序列的蛋白質或多肽"、"包括以特定SEQ ID NO記載的胺基酸序列的蛋白質或多肽",只要為具有與包括相應的SEQ ID NO的胺基酸序列的多肽相同或相應的活性的情形,則應明白具有一部分序列缺失、變形、經取代或加成的胺基酸序列的蛋白質亦可使用於本申請案。例如,只要為"包括SEQ ID NO:1的胺基酸序列的多肽"為與SEQ ID NO:1相應的序列、或具有與其相同或相應的活性的序列的情形,則應明白可屬於"包括SEQ ID NO:1的胺基酸序列的多肽"。例如,只要為具有與上述變異體蛋白質相同或相應的活性的情形,則不排除於上述胺基酸序列前後追加不變更蛋白質的功能的序列、可自然發生的突變、其潛伏性突變(silent mutation)或保留性取代,且應明白於具有此種序列追加或突變的情形時,亦屬於本申請案的範圍內。That is, in the present application, even if "protein or polypeptide having the amino acid sequence described in a specific SEQ ID NO" or "protein or polypeptide including the amino acid sequence described in the specific SEQ ID NO" is described, as long as In order to have the same or corresponding activity as the polypeptide comprising the amino acid sequence of the corresponding SEQ ID NO, it should be understood that the protein with a part of the sequence deletion, modification, substitution or addition of the amino acid sequence can also be used in This application. For example, as long as the "polypeptide including the amino acid sequence of SEQ ID NO: 1" is a sequence corresponding to SEQ ID NO: 1 or a sequence having the same or corresponding activity, it should be understood that it may belong to "including A polypeptide of the amino acid sequence of SEQ ID NO:1". For example, as long as it has the same or corresponding activity to the above-mentioned mutant protein, the addition of sequences that do not change the function of the protein before and after the above-mentioned amino acid sequence, naturally occurring mutations, and silent mutations are not excluded. ) Or reservation substitution, and it should be understood that when there is such a sequence addition or mutation, it also falls within the scope of this application.

於本申請案中,用語"保留性取代(conservative substitution)"是指使一個胺基酸由具有相似的結構及/或化學性質的其他胺基酸取代。上述變體可仍保留一個以上的生物學活性,並且具有例如一個以上的保留性取代。此種胺基酸取代通常可基於殘基的極性、電荷、溶解度、疏水性、親水性及/或兩親媒性(amphipathic nature)中的相似性而發生。例如,具有帶電荷的側鏈(electrically charged amino acid)的胺基酸中帶正電荷的(鹼性)胺基酸包括精胺酸、離胺酸及組胺酸,帶負電荷的(酸性)胺基酸包括麩胺酸及天冬胺酸,具有不帶電荷的側鏈(uncharged amino acid)的胺基酸中的非極性胺基酸(nonpolar amino acid)包括甘胺酸、丙胺酸、纈胺酸、白胺酸、異白胺酸、甲硫胺酸、苯丙胺酸、色胺酸及脯胺酸,極性(polar)或親水性(hydrophilic)胺基酸包括絲胺酸、蘇胺酸、半胱胺酸、酪胺酸、天冬醯胺及麩醯胺酸,上述非極性胺基酸中的芳香族胺基酸包括苯丙胺酸、色胺酸及酪胺酸。In this application, the term "conservative substitution" refers to the substitution of an amino acid by another amino acid with similar structure and/or chemical properties. The aforementioned variants may still retain more than one biological activity, and have, for example, more than one retention substitution. Such amino acid substitutions can generally occur based on similarity in polarity, charge, solubility, hydrophobicity, hydrophilicity, and/or amphipathic nature of the residue. For example, the positively charged (basic) amino acids of the amino acids with electrically charged amino acid include arginine, lysine and histidine, and the negatively charged (acidic) Amino acids include glutamine and aspartic acid. Among the amino acids with uncharged amino acid, the nonpolar amino acid includes glycine, alanine, and valeric acid. Amino acid, leucine, isoleucine, methionine, phenylalanine, tryptophan and proline, polar (polar) or hydrophilic (hydrophilic) amino acids include serine, threonine, Cysteine, tyrosine, asparagine, and glutamic acid. The aromatic amino acids in the non-polar amino acids include amphetamine, tryptophan and tyrosine.

於本申請案中,用語"變異體(variant)"是指一個以上的胺基酸於保留性取代(conservative substitution)及/或變形(modification)中與所列舉的上述序列(the recited sequence)不同,但保持上述蛋白質的功能(functions)或特性(properties)的蛋白質。變異體因數個胺基酸取代、缺失或加成而與識別的序列(identified sequence)不同。通常,可將上述蛋白質的胺基酸序列中的一個以上胺基酸變形,評估變形的上述蛋白質的特性而識別此種變異體。即,與天然蛋白質(native protein)相比,變異體的能力會增加、不變或降低。另外,一部分變體可包括去除如N-末端前導序列或跨膜域(transmembrane domain)的一個以上的部分而成的變異體。其他變異體可包括自成熟蛋白質(mature protein)的N-及/或C-末端去除一部分而成的變異體。上述用語"變異體"可使用變體、變形、變異的蛋白質、變異體多肽、變異等用語(英文表示為modification、modified protein、modified polypeptide、mutant、mutein、divergent、variant等),只要為以變異的含義使用的用語,則並不限制於此。就本申請案的目的而言,上述變異體可為變異的蛋白質的活性較天然的野生型或非變形蛋白質增加者,但並不限制於此。In this application, the term "variant" means that more than one amino acid is different from the recited sequence (the recited sequence) in conservative substitution and/or modification. , But retain the functions or properties of the aforementioned protein. The variant is different from the identified sequence due to several amino acid substitutions, deletions or additions. Generally, one or more amino acids in the amino acid sequence of the aforementioned protein can be deformed, and the characteristics of the deformed aforementioned protein can be evaluated to identify such variants. That is, compared with the native protein (native protein), the ability of the variant will increase, remain unchanged, or decrease. In addition, a part of the variant may include a variant obtained by removing one or more parts such as the N-terminal leader sequence or the transmembrane domain. Other variants may include variants obtained by removing a part from the N- and/or C-terminus of mature protein. The above-mentioned term "variant" can use terms such as variant, modified, mutated protein, variant polypeptide, and variant (in English, it means modification, modified protein, modified polypeptide, mutant, mutein, divergent, variant, etc.), as long as it is a variant The meaning of the terms used is not limited to this. For the purpose of this application, the aforementioned variant may be a variant protein whose activity is increased compared to a natural wild-type or non-deformed protein, but it is not limited thereto.

另外,變異體可包括對多肽的特性與二級結構影響最小的胺基酸的缺失或加成。例如,多肽可與在轉譯-同時(co-translationally)或轉譯-後(post-translationally)參與蛋白質的轉移(transfer)的蛋白質N-末端的訊號(或前導)序列共軛。另外,上述多肽可與其他序列或連接子共軛以可對多肽進行確認、精製或合成。In addition, variants may include deletions or additions of amino acids that have the least impact on the properties and secondary structure of the polypeptide. For example, the polypeptide may be conjugated to a signal (or leader) sequence at the N-terminus of a protein that participates in the transfer of the protein co-translationally or post-translationally. In addition, the above-mentioned polypeptides can be conjugated with other sequences or linkers to confirm, refine or synthesize the polypeptides.

本申請案的蛋白質變異體可為鳥胺酸脫羧酶變異體。於本申請案中,用語"鳥胺酸脫羧酶變異體"可與"變異體ODC蛋白質、ODC變異體、變異體鳥胺酸脫羧酶、變異體鳥胺酸去羧酶、變異體ODC蛋白質、ODC變異體、變異體ODC酶蛋白質、變異體ODC酶"等混用。The protein variant of this application may be an ornithine decarboxylase variant. In this application, the term "ornithine decarboxylase variant" can be used with "variant ODC protein, ODC variant, variant ornithine decarboxylase, variant ornithine decarboxylase, variant ODC protein, ODC variant, variant ODC enzyme protein, variant ODC enzyme "etc. are mixed.

上述變異體可為SEQ ID NO:1的胺基酸序列中第713個及第698個胺基酸中的任一個以上的胺基酸由與取代前的胺基酸不同的胺基酸取代而成者。The above variant may be that any one or more of the 713th and 698th amino acids in the amino acid sequence of SEQ ID NO: 1 is substituted with an amino acid different from the amino acid before substitution. Winner.

只要為與取代前的胺基酸不同的胺基酸,則上述"由其他胺基酸取代"並無限制。例如,可包括作為SEQ ID NO:1的胺基酸序列的第713個胺基酸的丙胺酸由除丙胺酸以外的疏水性胺基酸、鹼性胺基酸、酸性胺基酸、中性胺基酸或芳香族性胺基酸取代。即,只要為作為SEQ ID NO:1的胺基酸序列的第713個胺基酸的丙胺酸由除丙胺酸以外的其他胺基酸殘基取代、或作為第698個胺基酸的麩胺酸由除麩胺酸以外的其他胺基酸殘基取代,則並無限制。另一方面,於本申請案中,於表述為"已取代特定胺基酸"的情形時,即便未另外表明由其他胺基酸取代,亦應明白為由與取代前的胺基酸不同的胺基酸取代者。As long as it is an amino acid different from the amino acid before substitution, the above-mentioned "substitution with another amino acid" is not limited. For example, alanine, which may include the 713th amino acid as the amino acid sequence of SEQ ID NO:1, is composed of hydrophobic amino acids, basic amino acids, acidic amino acids, neutral Amino acid or aromatic amino acid substitution. That is, as long as the alanine, which is the 713th amino acid of the amino acid sequence of SEQ ID NO: 1, is substituted with an amino acid residue other than alanine, or the glutamine is the 698th amino acid The acid is substituted by amino acid residues other than glutamic acid without limitation. On the other hand, in this application, when it is expressed as "the specific amino acid has been substituted", even if it is not otherwise indicated that it is substituted by another amino acid, it should be understood that it is different from the amino acid before substitution. Amino acid substitutes.

具體而言,上述變異體可為於SEQ ID NO:1的胺基酸序列中,i)作為第713個胺基酸的丙胺酸由其他胺基酸取代、及/或ii)作為第698個胺基酸的麩胺酸由其他胺基酸取代的變異體。上述由其他胺基酸取代可為如下者:i)作為第713個胺基酸的丙胺酸由選自白胺酸、異白胺酸、纈胺酸、精胺酸、天冬胺酸、色胺酸及麩醯胺酸中的胺基酸取代;及/或ii)作為第698個胺基酸的麩胺酸由天冬胺酸取代。更具體而言,上述變異體可為i)作為第713個胺基酸的丙胺酸由選自白胺酸、異白胺酸、纈胺酸、精胺酸、天冬胺酸、色胺酸及麩醯胺酸中的胺基酸取代、及/或ii)作為第698個胺基酸的麩胺酸由天冬胺酸取代的變異體。Specifically, the above variant may be in the amino acid sequence of SEQ ID NO:1, i) the alanine as the 713th amino acid is substituted by another amino acid, and/or ii) as the 698th amino acid. A variant in which the glutamic acid of an amino acid is substituted by another amino acid. The above substitution by other amino acids may be the following: i) Alanine as the 713th amino acid is selected from leucine, isoleucine, valine, arginine, aspartic acid, tryptamine The amino acid in the acid and glutamic acid is substituted; and/or ii) the glutamic acid as the 698th amino acid is substituted with aspartic acid. More specifically, the above variant may be i) Alanine as the 713th amino acid is selected from leucine, isoleucine, valine, arginine, aspartic acid, tryptophan and The amino acid in the glutamic acid is substituted, and/or ii) a variant in which the glutamic acid of the 698th amino acid is substituted by aspartic acid.

於SEQ ID NO:1的胺基酸序列中,i)作為第713個胺基酸的丙胺酸由選自白胺酸、異白胺酸、纈胺酸、精胺酸、天冬胺酸、色胺酸及麩醯胺酸中的胺基酸取代、及/或ii)作為第698個胺基酸的麩胺酸由天冬胺酸取代的變異體可包括選自SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9、SEQ ID NO:19至SEQ ID NO:23中的任一胺基酸序列,具體而言,可必須由SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9、SEQ ID NO:19至SEQ ID NO:23中的任一胺基酸序列構成(consisting essentially of),更具體而言,可包括SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9、SEQ ID NO:19至SEQ ID NO:23中的任一胺基酸序列,但並不限制於此。In the amino acid sequence of SEQ ID NO: 1, i) alanine as the 713th amino acid is selected from leucine, isoleucine, valine, arginine, aspartic acid, The amino acid substitution of the amino acid and the glutamic acid, and/or ii) the variant in which the 698th amino acid is substituted by aspartic acid, may include a variant selected from SEQ ID NO: 4, SEQ ID NO: 8, SEQ ID NO: 9, SEQ ID NO: 19 to SEQ ID NO: 23 of any amino acid sequence, specifically, may have to be from SEQ ID NO: 4, SEQ ID NO: 8, Any amino acid sequence of SEQ ID NO: 9, SEQ ID NO: 19 to SEQ ID NO: 23 constitutes (consisting essentially of), more specifically, may include SEQ ID NO: 4, SEQ ID NO: 8 , SEQ ID NO: 9, SEQ ID NO: 19 to SEQ ID NO: 23, any amino acid sequence, but it is not limited thereto.

上述變異體可為如下者:於與SEQ ID NO:1的第713個及/或第698個位置相應的位置包括其他胺基酸的取代,與SEQ ID NO:1的胺基酸序列具有至少80%、90%、95%、96%、97%、98%或99%以上且未滿100%的序列同源性,且具有丁二胺生產活性。The above-mentioned variants may be the following: at positions corresponding to the 713th and/or 698th positions of SEQ ID NO:1, the substitution of other amino acids is included, and the amino acid sequence of SEQ ID NO:1 has at least 80%, 90%, 95%, 96%, 97%, 98% or more than 99% and less than 100% sequence homology, and has butanediamine production activity.

另外,上述變異體可包括SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9及SEQ ID NO:19至SEQ ID NO:23中的任一胺基酸序列、或與上述胺基酸序列具有80%以上的同源性或一致性的胺基酸序列,但並不限制於此。具體而言,本申請案的變異體可包括與SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9及SEQ ID NO:19至SEQ ID NO:23中的任一胺基酸序列具有至少80%、90%、95%、96%、97%、98%或99%同源性或一致性的多肽。另外,只要為具有此種同源性或一致性且表現出與上述蛋白質相應的功效的胺基酸序列,則具有除第713個或第698個胺基酸位置以外,一部分序列缺失、變形、經取代或加成的胺基酸序列的蛋白質亦包括於本申請案的範圍內。In addition, the above-mentioned variant may include any amino acid sequence of SEQ ID NO: 4, SEQ ID NO: 8, SEQ ID NO: 9 and SEQ ID NO: 19 to SEQ ID NO: 23, or a combination with the above-mentioned amino acid sequence. The acid sequence has more than 80% homology or identity of the amino acid sequence, but it is not limited to this. Specifically, the variant of the present application may include any amino acid sequence in SEQ ID NO: 4, SEQ ID NO: 8, SEQ ID NO: 9, and SEQ ID NO: 19 to SEQ ID NO: 23. A polypeptide having at least 80%, 90%, 95%, 96%, 97%, 98%, or 99% homology or identity. In addition, as long as it is an amino acid sequence that has such homology or identity and exhibits functions corresponding to the above-mentioned protein, it has a part of the sequence that is missing, deformed, excluding the 713th or 698th amino acid position. Proteins with substituted or added amino acid sequences are also included in the scope of this application.

於本申請案中,用語"同源性(homology)"或"一致性(identity)"是指與兩個給出的胺基酸序列或鹼基序列相關的程度,能夠以百分比表示。用語同源性及一致性時常可互換使用。In this application, the term "homology" or "identity" refers to the degree of correlation with two given amino acid sequences or base sequences, which can be expressed as a percentage. The terms homology and consistency are often used interchangeably.

藉由標準排列演算法確定保留的(conserved)聚核苷酸或多肽的序列同源性或一致性,可一併利用藉由使用的程式確立的預設空隙處罰。實質上,具有同源性(homologous)或相同(identical)的序列通常可沿著整個序列或整體-長度的至少約50%、60%、70%、80%或90%於中等或高度嚴格的條件(stringent conditions)下雜交。雜交亦考慮於聚核苷酸中含有簡並密碼子來代替密碼子的聚核苷酸。The sequence homology or identity of the conserved polynucleotide or polypeptide is determined by standard permutation algorithms, and the preset gap penalty established by the program used can be used together. In essence, a homologous or identical sequence can usually be along the entire sequence or at least about 50%, 60%, 70%, 80%, or 90% of the entire length. Hybridization under stringent conditions. Hybridization also considers polynucleotides that contain degenerate codons instead of codons.

例如,可利用如Pearson et al (1988)[美國科學學院學報(Proc. Natl. Acad. Sci. USA )85]: 2444中的預設參數而藉由如"FASTA"程式的公知的電腦演算法確定任意兩個聚核苷酸或多肽序列是否具有同源性、相似性或一致性。或者,可使用如於EMBOSS包的尼德曼程式(EMBOSS:歐洲分子生物學開放軟體包(The European Molecular Biology Open Software Suite),Rice et al., 2000, 遺傳學趨勢(Trends Genet.)16: 276-277)(5.0.0版本或更高版本)中執行的尼德曼-翁施(Needleman-Wunsch)演算法(Needleman and Wunsch, 1970, 分子生物學雜誌(J. Mol. Biol.)48: 443-453)確定(包括GCG程式包(Devereux, J., et al, 核酸研究(Nucleic Acids Research)12: 387 (1984))、BLASTP、BLASTN、FASTA(Atschul, [S.] [F.,] [ET AL, J MOLEC BIOL 215]: 403 (1990); Guide to Huge Computers, Martin J. Bishop, [ED.,] Academic Press, San Diego,1994,及[CARILLO ETA/.](1988)工業和應用數學學會(SIAM J Applied Math)48: 1073)。例如,可利用國立生物工程學資訊資料庫中心的BLAST或ClustalW確定同源性、相似性或一致性。For example, the default parameters in Pearson et al (1988) [Proc. Natl. Acad. Sci. USA 85]: 2444 can be used by well-known computer algorithms such as the "FASTA" program Determine whether any two polynucleotide or polypeptide sequences have homology, similarity or identity. Alternatively, you can use the Nederman program (EMBOSS: The European Molecular Biology Open Software Suite), such as the EMBOSS package, Rice et al., 2000, Trends Genet. 16: 276-277) (version 5.0.0 or higher) implemented in the Needleman-Wunsch algorithm (Needleman and Wunsch, 1970, J. Mol. Biol.) 48 : 443-453) confirmed (including GCG package (Devereux, J., et al, Nucleic Acids Research 12: 387 (1984)), BLASTP, BLASTN, FASTA (Atschul, [S.] [F. ,] [ET AL, J MOLEC BIOL 215]: 403 (1990); Guide to Huge Computers, Martin J. Bishop, [ED.,] Academic Press, San Diego, 1994, and [CARILLO ETA/.] (1988) The Society for Industrial and Applied Mathematics (SIAM J Applied Math) 48: 1073). For example, BLAST or ClustalW of the National Center for Bioengineering Information Database can be used to determine homology, similarity or consistency.

例如,如Smith and Waterman, 應用數學進展(Adv. Appl. Math)(1981) 2:482中所公告,例如利用如Needleman et al. (1970), 分子生物學雜誌(J Mol Biol.)48:443的GAP電腦程式對序列資訊進行比較,藉此可確定聚核苷酸或多肽的同源性、相似性或一致性。簡要而言,GAP程式定義為將相似的排列的符號(即,核苷酸或胺基酸)的數量除以兩個序列中更短者的符號的總數所得的值。用於GAP程式的預設參數可包括:(1)二進制比較矩陣(為了一致性而含有1的值,並且為了非-一致性而含有0的值)、及如Schwartz and Dayhoff, eds.,蛋白質序列和結構圖集(Atlas Of Protein Sequence And Structure),國家政務醫學研究基金會(National Biomedical Research Foundation),pp. 353-358 (1979)所揭示,Gribskov et al(1986) 核酸研究(Nucl. Acids Res.)14: 6745的加權比較矩陣(或EDNAFULL(NCBI NUC4.4的EMBOSS版本)取代矩陣);(2)用於各空隙的3.0處罰及各空隙中用於各符號的追加的0.10處罰(或空隙開放處罰10、空隙擴展處罰0.5);及(3)用於末端空隙的無處罰。因此,作為本申請案中所使用者,用語"同源性"或"一致性"表示序列間的相關性(relevance)。For example, as announced in Smith and Waterman, Advances in Applied Mathematics (Adv. Appl. Math) (1981) 2:482, such as Needleman et al. (1970), J Mol Biol. 48: The 443 GAP computer program compares sequence information to determine the homology, similarity or identity of polynucleotides or polypeptides. Briefly, the GAP formula is defined as the number of similarly arranged symbols (ie, nucleotides or amino acids) divided by the total number of symbols in the shorter of the two sequences. The default parameters for the GAP program can include: (1) Binary comparison matrix (contains a value of 1 for consistency and a value of 0 for non-consistency), and such as Schwartz and Dayhoff, eds., protein Atlas Of Protein Sequence And Structure, National Biomedical Research Foundation, pp. 353-358 (1979), disclosed by Gribskov et al (1986) Nucl. Acids Res.) 14: 6745 weighted comparison matrix (or EDNAFULL (EMBOSS version of NCBI NUC4.4) replacement matrix); (2) 3.0 penalty for each gap and 0.10 penalty for each symbol in each gap ( Or gap opening penalty 10, gap expansion penalty 0.5); and (3) no penalty for end gaps. Therefore, as the user in this application, the term "homology" or "identity" means the relevance between sequences.

另外,可藉由在定義的嚴格條件下藉由南方雜交實驗比較序列來確認任意兩個聚核苷酸或多肽序列是否具有同源性、相似性或一致性,定義的適當的雜交條件為相應技術範圍內,可藉由業者所熟知的方法(例如,J. Sambrook et al., Molecular Cloning, A Laboratory Manual, 2nd Edition, Cold Spring Harbor Laboratory press, Cold Spring Harbor, New York, 1989; F.M. Ausubel et al., Current Protocols in Molecular Biology, John Wiley & Sons, Inc., New York)確定。In addition, you can confirm whether any two polynucleotide or polypeptide sequences have homology, similarity or identity by comparing sequences under defined stringent conditions by southern hybridization experiments. The defined appropriate hybridization conditions are corresponding Within the technical scope, methods well known to the industry can be used (for example, J. Sambrook et al., Molecular Cloning, A Laboratory Manual, 2nd Edition, Cold Spring Harbor Laboratory press, Cold Spring Harbor, New York, 1989; FM Ausubel et al. al., Current Protocols in Molecular Biology, John Wiley & Sons, Inc., New York).

於本申請案中,用語"鳥胺酸脫羧酶變異體"可與具有丁二胺生產能力的鳥胺酸脫羧酶的變異體多肽、鳥胺酸脫羧酶蛋白質的變異體、鳥胺酸脫羧酶蛋白質的變異體多肽、鳥胺酸脫羧酶變異體多肽、鳥胺酸脫羧酶的變體、鳥胺酸脫羧酶蛋白質的變體、變異體鳥胺酸脫羧酶、變異體鳥胺酸脫羧酶蛋白質等混用。另外,上述鳥胺酸脫羧酶可來自乳桿菌屬(Lactobacillus sp.)、酵母屬(Saccharomyces sp.)或大腸桿菌(Escherichia coli,E. coli),但並不限制於此。In this application, the term "ornithine decarboxylase variant" can be used in conjunction with ornithine decarboxylase variant polypeptides, ornithine decarboxylase protein variants, ornithine decarboxylase capable of producing butanediamine. Protein variant polypeptide, ornithine decarboxylase variant polypeptide, ornithine decarboxylase variant, ornithine decarboxylase protein variant, variant ornithine decarboxylase, variant ornithine decarboxylase protein And so mixed. In addition, the aforementioned ornithine decarboxylase may be derived from Lactobacillus sp., Saccharomyces sp. or Escherichia coli (E. coli), but is not limited thereto.

上述鳥胺酸脫羧酶變異體可於SEQ ID NO:1的胺基酸序列中第713個及/或第698個位置包括變異,即便為於SEQ ID NO:1加成、缺失胺基酸的胺基酸序列,只要為與自SEQ ID NO:1的N-末端起713號及/或698號胺基酸相應的位置的胺基酸經取代的變異體,則包括於本申請案的範圍。The above-mentioned ornithine decarboxylase variants may include variations at the 713th and/or 698th positions in the amino acid sequence of SEQ ID NO:1, even those with addition or deletion of amino acids in SEQ ID NO:1 The amino acid sequence, as long as it is a variant of the amino acid substitution at the position corresponding to the amino acid No. 713 and/or No. 698 from the N-terminus of SEQ ID NO: 1, is included in the scope of the application .

關於胺基酸殘基位置,本申請案中所揭示的用語"相應的(corresponding to)"是指蛋白質或肽中列舉的位置的胺基酸殘基,或者與蛋白質或肽中列舉的殘基相似、相同或同源的胺基酸殘基。本申請案中所使用的"相應區域"通常是指相關蛋白質或參考蛋白質中的相似的位置。Regarding the positions of amino acid residues, the term "corresponding to" disclosed in this application refers to the amino acid residues at the positions listed in the protein or peptide, or with the residues listed in the protein or peptide. Similar, identical or homologous amino acid residues. The "corresponding region" used in this application usually refers to a similar position in a related protein or a reference protein.

上述鳥胺酸脫羧酶蛋白質的變異體為SEQ ID NO:1的胺基酸序列中第713個及/或第698個胺基酸由其他胺基酸取代者,可為包括SEQ ID NO:1的胺基酸序列或具有較來自野生型微生物的變異前鳥胺酸脫羧酶強化的活性的變異體鳥胺酸脫羧酶蛋白質。如上所述的鳥胺酸脫羧酶蛋白質的變異體是指與以上所說明的SEQ ID NO:1的胺基酸序列具有至少80%、85%、90%、95%、96%、97%、98%或99%以上的同源性或一致性的胺基酸中與SEQ ID NO:1的第713個或第698個相應的位置的胺基酸變異者。The above-mentioned ornithine decarboxylase protein variants are those in which the 713th and/or 698th amino acid in the amino acid sequence of SEQ ID NO: 1 are replaced by other amino acids, which may include SEQ ID NO: 1 The amino acid sequence or the mutant ornithine decarboxylase protein with enhanced activity compared with the mutant pre-ornithine decarboxylase from wild-type microorganisms. The above-mentioned ornithine acid decarboxylase protein variant refers to the amino acid sequence of SEQ ID NO: 1 described above having at least 80%, 85%, 90%, 95%, 96%, 97%, The amino acid at the 713th or 698th position corresponding to SEQ ID NO:1 among amino acids with 98% or more homology or identity.

上述第713個及/或第698個胺基酸變異可為i)作為第713個胺基酸的丙胺酸由白胺酸、異白胺酸、纈胺酸、精胺酸、天冬胺酸、色胺酸或麩醯胺酸取代、及/或ii)作為第698個胺基酸的麩胺酸由天冬胺酸取代者。The above-mentioned 713th and/or 698th amino acid variation can be i) Alanine as the 713th amino acid consists of leucine, isoleucine, valine, arginine, aspartic acid , Tryptophan or glutamic acid substitution, and/or ii) the glutamine as the 698th amino acid is substituted by aspartic acid.

具體而言,上述鳥胺酸脫羧酶變異體可為於SEQ ID NO:1的胺基酸序列中,i)作為第713個胺基酸的丙胺酸由白胺酸、異白胺酸、纈胺酸、精胺酸、天冬胺酸、色胺酸或麩醯胺酸取代、及/或ii)作為第698個胺基酸的麩胺酸由天冬胺酸取代者,且可為具有較包括上述SEQ ID NO:1的胺基酸序列的蛋白質或來自野生型微生物的變異前鳥胺酸脫羧酶蛋白質強化的活性者。Specifically, the aforementioned ornithine decarboxylase variant may be in the amino acid sequence of SEQ ID NO:1, i) alanine as the 713th amino acid is composed of leucine, isoleucine, and valerate. Amino acid, arginine, aspartic acid, tryptophan or glutamic acid substitution, and/or ii) the glutamic acid as the 698th amino acid is substituted by aspartic acid, and may have Compared with the protein including the amino acid sequence of SEQ ID NO: 1 above or the protein with enhanced activity of the mutant pre-ornithine decarboxylase protein from wild-type microorganisms.

就本申請案的目的而言,於包括上述鳥胺酸脫羧酶蛋白質的變異體的微生物的情形時,特徵在於增加丁二胺的產量、增加丁二胺的純度或增加丁二胺的生產選擇性。本申請案的蛋白質變異體的特徵在於:具有基因調節活性以較天然的野生型或非變異鳥胺酸脫羧酶增加丁二胺的生產能力、丁二胺的純度或丁二胺的生產選擇性。特別是,於可藉由導入有本申請案的蛋白質變異體的微生物阻礙作為鳥胺酸脫羧酶的副反應之一的戊二胺(cadaverine)的合成且增加丁二胺產量的方面存在意義。For the purpose of this application, in the case of microorganisms including the above-mentioned ornithine decarboxylase protein variants, it is characterized by increasing the production of butanediamine, increasing the purity of butanediamine or increasing the production options of butanediamine Sex. The protein variant of the present application is characterized in that it has gene regulation activity to increase the production capacity of butanediamine, the purity of butanediamine or the selectivity of butanediamine production by a more natural wild-type or non-mutated ornithine decarboxylase. . In particular, it is significant in that it is possible to inhibit the synthesis of cadaverine, which is one of the side reactions of ornithine decarboxylase, by microorganisms into which the protein variant of the present application is introduced, and to increase the production of butanediamine.

本申請案的又一實施方式提供一種編碼上述鳥胺酸脫羧酶蛋白質的變異體的聚核苷酸。Another embodiment of the present application provides a polynucleotide encoding a variant of the aforementioned ornithine decarboxylase protein.

包括SEQ ID NO:1的胺基酸序列的鳥胺酸脫羧酶蛋白質及其變異體如上所述。The ornithine decarboxylase protein including the amino acid sequence of SEQ ID NO: 1 and its variants are as described above.

於本申請案中,用語"聚核苷酸"作為核苷酸單體(monomer)藉由共價鍵較長地連成鏈狀的核苷酸的聚合物(polymer),其是固定長度以上的(Deoxyribonucleic Acid,DNA)或RNA鏈,更具體而言,是指編碼上述變體的聚核苷酸片段。In this application, the term "polynucleotide" is used as a polymer of nucleotide monomers (monomers) that are linked by covalent bonds to form a chain of nucleotides longer than a fixed length. Deoxyribonucleic Acid (DNA) or RNA strands, more specifically, refer to polynucleotide fragments encoding the aforementioned variants.

本申請案的編碼鳥胺酸脫羧酶變異體的聚核苷酸只要為編碼本申請案的具有丁二胺的生產活性的變異體多肽的聚核苷酸序列,則可無限制地包括。於本申請案中,編碼鳥胺酸脫羧酶蛋白質的胺基酸序列的基因例如可為speC、odc、spe1或speF基因,上述基因可來自乳桿菌屬、酵母屬或大腸桿菌(Escherichia coli,E. coli),但並不受此限制。另外,上述基因可為編碼SEQ ID NO:1、SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9、SEQ ID NO:19至SEQ ID NO:23中的任一胺基酸序列的鹼基序列,更具體而言,可為包括SEQ ID NO:10、SEQ ID NO:13、SEQ ID NO:17、SEQ ID NO:18及SEQ ID NO:24至SEQ ID NO:28中的任一鹼基序列的序列,但並不限制於此。The polynucleotide encoding the ornithine decarboxylase variant of the present application may be included without limitation as long as it is a polynucleotide sequence encoding the variant polypeptide having the production activity of butanediamine of the present application. In the present application, the gene encoding the amino acid sequence of the ornithine decarboxylase protein can be, for example, the speC, odc, spe1 or speF gene, and the aforementioned genes can be from Lactobacillus, Saccharomyces or Escherichia coli (Escherichia coli, E . coli), but not subject to this restriction. In addition, the above-mentioned gene may encode any amino acid sequence of SEQ ID NO: 1, SEQ ID NO: 4, SEQ ID NO: 8, SEQ ID NO: 9, SEQ ID NO: 19 to SEQ ID NO: 23 More specifically, the base sequence of SEQ ID NO: 10, SEQ ID NO: 13, SEQ ID NO: 17, SEQ ID NO: 18, and SEQ ID NO: 24 to SEQ ID NO: 28 The sequence of any base sequence, but not limited to this.

具體而言,本申請案的聚核苷酸因密碼子的簡並性(degeneracy)或考慮到欲表現上述多肽的生物所喜好的密碼子而可於不改變多肽的胺基酸序列的範圍內對編碼區域實現各種變形。具體而言,只要為編碼SEQ ID NO:1的胺基酸序列中第713個及/或第698個胺基酸由其他胺基酸取代的鳥胺酸脫羧酶蛋白質的變異體的聚核苷酸序列,則可無限制地包括。Specifically, the polynucleotide of the present application can be within the range of not changing the amino acid sequence of the polypeptide due to the degeneracy of the codons or considering the codons preferred by the organisms that intend to express the above-mentioned polypeptides. Realize various deformations to the coding area. Specifically, as long as it is a polynucleoside encoding a variant of ornithine decarboxylase protein in which the 713th and/or 698th amino acid of the amino acid sequence of SEQ ID NO: 1 is substituted by another amino acid Acid sequences can be included without limitation.

另外,只要為編碼於嚴格的條件下與可自公知的基因序列製備的探針、例如上述鹼基序列整體或一部分的互補序列雜交而SEQ ID NO:1的胺基酸序列中第713個及/或第698個胺基酸由其他胺基酸取代的具有丁二胺生產活性的鳥胺酸脫羧酶蛋白質的序列,則可無限制地包括。上述"嚴格的條件(stringent condition)"是指可使聚核苷酸間實現特異性雜交的條件。於文獻(例如,J. Sambrook et al.,同源)中有具體地記載有此種條件。例如,可列舉如下條件:同源性或一致性較高的基因間雜交、具有40%以上、具體而言為90%以上、更具體而言為95%以上、進而具體而言為97%以上、特別具體而言為99%以上的同源性或一致性的基因間雜交,同源性或一致性低於其的基因間不雜交的條件;或普通的南方雜交(southern hybridization)的清洗條件、即於相當於60℃、1×SSC、0.1%十二烷基磺酸鈉(Sodium Dodecyl Sulfonate,SDS)、具體而言為60℃、0.1×SSC、0.1% SDS、更具體而言為68℃、0.1×SSC、0.1% SDS的鹽濃度及溫度下清洗1次、具體而言為2次至3次的條件。In addition, as long as it is encoded under stringent conditions with a probe that can be prepared from a known gene sequence, such as the complementary sequence of the whole or part of the above-mentioned base sequence, the 713th and the 713th in the amino acid sequence of SEQ ID NO:1 /Or the sequence of the ornithine decarboxylase protein with butanediamine production activity in which the 698th amino acid is substituted by another amino acid, can be included without limitation. The above-mentioned "stringent conditions" refer to conditions that can achieve specific hybridization between polynucleotides. Such conditions are specifically described in the literature (for example, J. Sambrook et al., homology). For example, the following conditions can be cited: intergene hybridization with high homology or identity, having 40% or more, specifically 90% or more, more specifically 95% or more, and more specifically 97% or more , In particular, the hybridization between genes with more than 99% homology or identity, and the conditions for non-hybridization between genes whose homology or identity is lower; or the cleaning conditions of ordinary southern hybridization , Which is equivalent to 60℃, 1×SSC, 0.1% Sodium Dodecyl Sulfonate (SDS), specifically 60℃, 0.1×SSC, 0.1% SDS, more specifically 68 The conditions of washing once, specifically 2 to 3 times under the salt concentration and temperature of ℃, 0.1×SSC, 0.1% SDS.

雜交即便根據雜交的嚴格度而會發生鹼基間的失配(mismatch),但要求兩個核酸具有互補序列。用語"互補"用於記述可彼此雜交的核苷酸鹼基間的關係。例如,關於DNA,腺苷與胸嘧啶互補,胞嘧啶與鳥嘌呤互補。因此,本申請案不僅可包括實質上相似的核酸序列,而且亦包括與整個序列互補的單離的核酸片段。Even though hybridization may cause mismatch between bases according to the stringency of hybridization, it requires that the two nucleic acids have complementary sequences. The term "complementary" is used to describe the relationship between nucleotide bases that can hybridize to each other. For example, with regard to DNA, adenosine is complementary to thymine, and cytosine is complementary to guanine. Therefore, the present application may not only include substantially similar nucleic acid sequences, but also include isolated nucleic acid fragments that are complementary to the entire sequence.

具體而言,具有同源性或一致性的聚核苷酸可於55℃的Tm值下使用包括雜交步驟的雜交條件,並使用上述條件而進行探測。另外,上述Tm值可為60℃、63℃或65℃,但並不限制於此,可根據其目的由業者適當地調節。Specifically, polynucleotides with homology or identity can be probed using hybridization conditions including a hybridization step at a Tm value of 55°C and using the above-mentioned conditions. In addition, the above-mentioned Tm value may be 60°C, 63°C, or 65°C, but it is not limited to this, and can be appropriately adjusted by the operator according to the purpose.

雜交聚核苷酸的適當的嚴格度依存於聚核苷酸的長度及互補性程度,參數於本技術領域內熟知(參照Sambrook et al., supra, 9.50-9.51, 11.7-11.8)。The appropriate stringency of a hybrid polynucleotide depends on the length and degree of complementarity of the polynucleotide, and the parameters are well known in the art (see Sambrook et al., supra, 9.50-9.51, 11.7-11.8).

本申請案的又一實施方式提供一種包括編碼鳥胺酸脫羧酶變異體的聚核苷酸的載體。Another embodiment of the present application provides a vector including a polynucleotide encoding an ornithine decarboxylase variant.

包括SEQ ID NO:1的胺基酸序列的鳥胺酸脫羧酶、其變異體及上述聚核苷酸如上所述。The ornithine decarboxylase including the amino acid sequence of SEQ ID NO:1, its variants, and the above-mentioned polynucleotide are as described above.

本申請案中所使用的用語"載體(vector)"是指含有編碼以可於適當的宿主內表現目標多肽的方式可進行動作地連接於適當的調節序列的上述目標多肽的聚核苷酸的鹼基序列的DNA製備物。上述調節序列可包括可開始進行轉錄的啟動子、用以調節此種轉錄的任意的操縱序列、編碼適當的信使核糖核酸(Messenger RNA,mRNA)核糖體結合位點的序列、及調節轉錄及解碼的終止的序列。載體轉形至適當的宿主細胞內後,可與宿主基因組無關地複製或發揮功能,可整合至基因組本身。The term "vector" as used in this application refers to a polynucleotide that encodes the above-mentioned target polypeptide operably linked to an appropriate regulatory sequence in a manner that can express the target polypeptide in an appropriate host DNA preparation of base sequence. The above-mentioned regulatory sequence may include a promoter that can initiate transcription, any manipulation sequence used to regulate such transcription, a sequence encoding an appropriate messenger RNA (mRNA) ribosome binding site, and regulation of transcription and decoding The terminating sequence. After the vector is transformed into an appropriate host cell, it can replicate or function independently of the host genome, and can be integrated into the genome itself.

本申請案中使用的載體並無特別限定,可利用業界內已知的任意的載體。作為通常使用的載體的示例,可列舉:天然狀態或重組狀態的質體、黏質體、病毒及細菌噬菌體。例如,作為噬菌體載體或黏質體載體,可使用pWE15、M13、MBL3、MBL4、IXII、ASHII、APII、t10、t11、Charon4A及Charon21A等,作為質體載體,可使用pBR類、pUC類、pBluescriptII類、pGEM類、pTZ類、pCL類及pET類等。具體而言,可使用pDZ、pACYC177、pACYC184、pCL、pECCG117、pUC19、pBR322、pMW118、pCC1BAC載體等。The carrier used in this application is not particularly limited, and any carrier known in the industry can be used. Examples of commonly used vectors include natural or recombinant plastids, mucilages, viruses, and bacteriophages. For example, as a phage vector or a mucin vector, pWE15, M13, MBL3, MBL4, IXII, ASHII, APII, t10, t11, Charon4A, Charon21A, etc. can be used, and as a plastid vector, pBR, pUC, pBluescriptII can be used Class, pGEM class, pTZ class, pCL class and pET class, etc. Specifically, pDZ, pACYC177, pACYC184, pCL, pECCG117, pUC19, pBR322, pMW118, pCC1BAC vector, etc. can be used.

作為一例,可藉由細胞內染色體插入用載體將於染色體內編碼目標多肽的聚核苷酸插入至染色體內。可藉由業界內已知的任意方法、例如同源重組(homologous recombination)將上述聚核苷酸插入至染色體內,但並不限定於此。可更包括用以確認上述染色體插入與否的篩選標誌(selection marker)。篩選標誌用以篩選以載體轉形的細胞、即確認目標核酸分子的插入與否,可使用賦予如耐藥物性、營養需求性、對細胞毒性劑的耐性或表面多肽的表現的可選擇的表型的標誌。於經選擇劑(selective agent)處理的環境中,僅存活表現篩選標誌的細胞或表現出不同的表型性狀,因此可篩選轉形的細胞。As an example, the polynucleotide encoding the target polypeptide in the chromosome can be inserted into the chromosome by using a vector for intracellular chromosome insertion. The polynucleotide can be inserted into the chromosome by any method known in the industry, such as homologous recombination, but it is not limited to this. It may further include a selection marker to confirm whether the chromosome is inserted or not. Screening markers are used to screen cells transformed with vectors, that is, to confirm whether the target nucleic acid molecule has been inserted or not, and can use selectable tables that confer drug resistance, nutritional requirements, resistance to cytotoxic agents, or surface polypeptide performance Type logo. In an environment treated with a selective agent, only cells that exhibit screening markers or show different phenotypic traits survive, so transformed cells can be screened.

作為本申請案的又一實施方式,本申請案提供一種包括上述鳥胺酸脫羧酶或其變異體,或者包括編碼上述酶的聚核苷酸而生產丁二胺的微生物。As another embodiment of the present application, the present application provides a microorganism that includes the above-mentioned ornithine decarboxylase or a variant thereof, or includes a polynucleotide encoding the above-mentioned enzyme to produce butanediamine.

於本申請案中,用語"包括變異體多肽的微生物"或"包括鳥胺酸脫羧酶變異體的微生物"只要為包括本申請案的蛋白質變異體而可生產丁二胺的微生物,則均可,但並不限制於此。例如,包括本申請案的蛋白質變異體的微生物可為於天然的野生型微生物或生產丁二胺的微生物中表現本申請案的蛋白質變異體,從而丁二胺的生產能力、丁二胺的生產純度或丁二胺的生產選擇性增加的重組微生物。上述重組微生物可為丁二胺的生產能力、生產純度或丁二胺的生產選擇性較天然的野生型微生物或非變形微生物增加的微生物,但並不限制於此。In the present application, the term "microorganisms including variant polypeptides" or "microorganisms including ornithine decarboxylase variants" can be used as long as they include the protein variants of the present application and can produce butanediamine. , But not limited to this. For example, the microorganisms including the protein variants of the present application may be natural wild-type microorganisms or microbes that produce butanediamine that express the protein variants of the present application, so that the production capacity of butanediamine and the production of butanediamine Recombinant microorganisms with increased purity or selective production of butanediamine. The above-mentioned recombinant microorganisms may be microorganisms with increased production capacity, production purity, or butanediamine production selectivity compared to natural wild-type microorganisms or non-deformed microorganisms, but are not limited thereto.

具體而言,上述微生物作為表現包括SEQ ID NO:1的胺基酸序列內的一個以上胺基酸變異的鳥胺酸脫羧酶變異體的微生物,上述胺基酸變異可包括自N-末端起第713個及/或第698個胺基酸由其他胺基酸取代。另外,上述微生物可為於SEQ ID NO:1的胺基酸序列中第713個或第698個胺基酸由其他胺基酸取代且具有丁二胺的生產活性的表現變異體多肽的微生物,但並不限制於此。Specifically, the above-mentioned microorganisms are microorganisms that exhibit ornithine decarboxylase variants that include more than one amino acid mutation in the amino acid sequence of SEQ ID NO:1, and the above-mentioned amino acid mutations may include those from the N-terminus. The 713th and/or 698th amino acid is replaced by another amino acid. In addition, the above-mentioned microorganism may be a microorganism expressing a variant polypeptide in which the 713th or 698th amino acid in the amino acid sequence of SEQ ID NO: 1 is substituted with another amino acid and has butanediamine production activity, But it is not limited to this.

上述丁二胺、包括SEQ ID NO:1的胺基酸序列的鳥胺酸脫羧酶蛋白質及其變異體如上所述。The above-mentioned butanediamine, ornithine decarboxylase protein including the amino acid sequence of SEQ ID NO:1 and variants thereof are as described above.

於本申請案中,用語"以表現/表現"蛋白質是指靶蛋白導入至微生物內、或以於微生物內表現的方式變形的形態。於上述靶蛋白為存在於微生物內的蛋白質的情形時,指活性較內在或變形前強化的狀態。就本申請案的目的而言,"靶蛋白"可為上述具有丁二胺生產能力的鳥胺酸脫羧酶蛋白質的變異體。In this application, the term "expressing/expressing" protein refers to a form in which the target protein is introduced into the microorganism or deformed in a manner expressed in the microorganism. When the above-mentioned target protein is a protein that exists in a microorganism, it refers to a state in which the activity is more intrinsic or strengthened before deformation. For the purpose of this application, the "target protein" may be a variant of the aforementioned ornithine decarboxylase protein with butanediamine production capacity.

具體而言,"蛋白質的導入"是指表現出微生物原本未具有的特定蛋白質的活性,或表現出較上述蛋白質的內在活性或修飾前活性提高的活性。例如,可為編碼特定蛋白質的聚核苷酸導入至微生物內的染色體,或包括編碼特定蛋白質的聚核苷酸的載體導入至微生物內而表現出其活性。另外,"活性的強化"是指活性較微生物所具有的特定蛋白質的內在活性或修飾前活性提高。上述"內在活性"是指於因自然或人為因素引起的遺傳性變異而微生物轉形的情形時,轉形前的母菌株原本所具有的特定蛋白質的活性。Specifically, "introduction of protein" refers to exhibiting the activity of a specific protein that the microorganism does not originally possess, or exhibiting an activity that is higher than the intrinsic activity of the aforementioned protein or the activity before modification. For example, a polynucleotide encoding a specific protein may be introduced into a chromosome in a microorganism, or a vector including a polynucleotide encoding a specific protein may be introduced into a microorganism to exhibit its activity. In addition, "enhancement of activity" means that the activity is higher than the intrinsic activity of the specific protein possessed by the microorganism or the activity before modification. The above-mentioned "intrinsic activity" refers to the activity of a specific protein originally possessed by the parent strain before the transformation when the microorganism is transformed due to genetic variation caused by natural or human factors.

具體而言,本申請案的活性強化可藉由選自由如下方法所組成的族群中的任一種以上的方法實現,但並不限制於此:增加編碼本申請案的蛋白質變異體的基因的細胞內的複製數,將變異導入至編碼上述蛋白質變異體的基因的表現調節序列的方法;將編碼鳥胺酸脫羧酶蛋白質變異體的基因表現調節序列更換為活性強烈的序列的方法;以編碼上述蛋白質變異體的基因代替染色體上的編碼鳥胺酸脫羧酶的野生型蛋白質的基因的方法;以強化上述蛋白質變異體的活性的方式亦將變異導入至編碼上述鳥胺酸脫羧酶蛋白質的基因的方法;及將蛋白質變異體導入至微生物的方法。Specifically, the activity enhancement of the present application can be achieved by any one or more methods selected from the group consisting of the following methods, but is not limited to this: increase the cell of the gene encoding the protein variant of the present application A method of introducing a mutation into the expression regulatory sequence of a gene encoding the aforementioned protein variant; a method of replacing the gene expression regulatory sequence encoding an ornithine decarboxylase protein variant with a strongly active sequence; A method of replacing the gene of the protein variant with the gene encoding the wild-type protein of ornithine decarboxylase on the chromosome; and introducing the mutation into the gene encoding the aforementioned ornithine decarboxylase protein in a manner that enhances the activity of the aforementioned protein variant Methods; and methods for introducing protein variants into microorganisms.

於上述內容中,增加基因的複製數並無特別限制,但能夠以可進行動作地連接於載體的形態執行、或藉由插入至宿主細胞內的染色體內而執行。具體而言,可將如下載體導入至宿主細胞內:以可進行動作的方式連接有編碼本申請案的蛋白質的聚核苷酸且可與宿主無關地複製並發揮功能。或者,可將如下載體導入至宿主細胞的染色體內:以可進行動作的方式連接有上述聚核苷酸且可將上述聚核苷酸插入至宿主細胞內的染色體內。可藉由業界內已知的任意方法、例如同源重組將上述聚核苷酸插入至染色體內。In the above description, increasing the number of copies of the gene is not particularly limited, but it can be performed in a form that can be operably linked to a vector, or by being inserted into a chromosome in a host cell. Specifically, a vector can be introduced into a host cell in which a polynucleotide encoding the protein of the present application is linked in an operable manner and can be replicated and function independently of the host. Alternatively, a vector may be introduced into the chromosome of the host cell: the polynucleotide is operably linked and the polynucleotide may be inserted into the chromosome of the host cell. The polynucleotide can be inserted into the chromosome by any method known in the industry, such as homologous recombination.

以增加聚核苷酸的表現的方式變形表現調節序列並無特別限制,但可藉由缺失、插入、非保留性或保留性取代或其組合對核酸序列誘導序列上的變異以進一步強化上述表現調節序列的活性來執行,或藉由更換為具有更強的活性的核酸序列來執行。上述表現調節序列並不特別限制於此,可包括啟動子、操縱序列、編碼核糖體結合位點的序列、調節轉錄及解碼的終止的序列等。There is no particular restriction on the modification of the expression regulating sequence in a manner that increases the expression of the polynucleotide, but it can be further enhanced by inducing sequence variation on the nucleic acid sequence by deletion, insertion, non-retention or retention substitution or a combination thereof It can be performed by regulating the activity of the sequence, or by replacing it with a nucleic acid sequence with stronger activity. The above-mentioned expression regulating sequences are not particularly limited thereto, and may include promoters, operating sequences, sequences encoding ribosome binding sites, sequences regulating the termination of transcription and decoding, and the like.

可於上述聚核苷酸表現單位的上部連接強大的啟動子來代替原本的啟動子,且並不限定於此。於公知的強大的啟動子的示例中,有cj1至cj7啟動子(韓國註冊專利第10-0620092號)、lac啟動子、trp啟動子、trc啟動子、tac啟動子、λ噬菌體PR啟動子、PL啟動子、tet啟動子、gapA啟動子、SPL7啟動子、SPL13(sm3)啟動子(韓國註冊專利第10-1783170號)、O2啟動子(韓國註冊專利第10-1632642號)、tkt啟動子及yccA啟動子等,但並不限定於此。A powerful promoter can be connected to the upper part of the polynucleotide expression unit to replace the original promoter, and it is not limited to this. Examples of well-known powerful promoters include cj1 to cj7 promoters (Korea Registered Patent No. 10-0620092), lac promoter, trp promoter, trc promoter, tac promoter, lambda phage PR promoter, PL promoter, tet promoter, gapA promoter, SPL7 promoter, SPL13 (sm3) promoter (Korean registered patent No. 10-1783170), O2 promoter (Korean registered patent No. 10-1632642), tkt promoter And yccA promoter, but not limited to this.

染色體上的聚核苷酸序列的變形並無特別限制,可藉由缺失、插入、非保留性或保留性取代或其組合對核酸序列誘導表現調節序列上的變異以進一步強化上述聚核苷酸序列的活性來執行,或藉由更換為以具有更強的活性的方式改良的聚核苷酸序列來執行。The deformation of the polynucleotide sequence on the chromosome is not particularly limited, and the nucleic acid sequence can be induced to express a regulatory sequence variation by deletion, insertion, non-reserved or reserved substitution or a combination thereof to further strengthen the aforementioned polynucleotide The activity of the sequence is performed, or it is performed by replacing it with a polynucleotide sequence that is improved in a way that has stronger activity.

如上所述的蛋白質活性的導入及強化可為相應的蛋白質的活性或濃度以野生型或非變形微生物菌株中的蛋白質的活性或濃度為基準而通常增加至最小1%、10%、25%、50%、75%、100%、150%、200%、300%、400%或500%,最大1000%或2000%,但並不限制於此。The introduction and enhancement of protein activity as described above can be that the activity or concentration of the corresponding protein is generally increased to a minimum of 1%, 10%, 25%, etc., based on the activity or concentration of the protein in the wild-type or non-proteomorphic microorganism strain. 50%, 75%, 100%, 150%, 200%, 300%, 400% or 500%, up to 1000% or 2000%, but not limited to this.

於本申請案中,包括上述鳥胺酸脫羧酶變異體或包括編碼上述鳥胺酸脫羧酶變異體的聚核苷酸的微生物可為藉由以包括上述聚核苷酸的載體轉形而製備的重組微生物,但並不限制於此。In the present application, a microorganism including the aforementioned ornithine decarboxylase variant or a polynucleotide encoding the aforementioned ornithine decarboxylase variant can be prepared by transforming a vector comprising the aforementioned polynucleotide Of recombinant microorganisms, but not limited to this.

於本申請案中,用語"轉形"是指將包括編碼靶蛋白的聚核苷酸的載體導入至宿主細胞內而可使上述聚核苷酸編碼的蛋白質可於宿主細胞內表現。轉形的聚核苷酸只要可於宿主細胞內表現,則可包括插入至宿主細胞的染色體內定位或位於染色體外兩者。另外,上述聚核苷酸包括編碼靶蛋白的DNA及RNA。上述聚核苷酸只要為可導入至宿主細胞內而表現者,則能夠以任一形態導入。例如,上述聚核苷酸能夠以作為包括自行表現所需的所有要素的基因結構體的表現卡匣(expression cassette)的形態導入至宿主細胞。上述表現卡匣通常可包括以可進行動作的方式連接於上述聚核苷酸的啟動子(promoter)、轉錄終止訊號、核糖體結合位點及轉譯終止訊號。上述表現卡匣可為可實現自複製的表現載體形態。另外,上述聚核苷酸亦可為以其本身的形態導入至宿主細胞而於宿主細胞以可進行動作的方式與表現所需的序列連接者,且並不限定於此。In this application, the term "transformation" refers to introducing a vector including a polynucleotide encoding a target protein into a host cell so that the protein encoded by the polynucleotide can be expressed in the host cell. As long as the transformed polynucleotide can be expressed in the host cell, it may include both inserted into the chromosome of the host cell or located outside the chromosome. In addition, the aforementioned polynucleotides include DNA and RNA encoding the target protein. The aforementioned polynucleotide can be introduced in any form as long as it can be introduced into a host cell and expressed. For example, the above-mentioned polynucleotide can be introduced into a host cell in the form of an expression cassette as a gene structure including all elements required for self-expression. The performance cassette may generally include a promoter connected to the polynucleotide in an operable manner, a transcription termination signal, a ribosome binding site, and a translation termination signal. The above-mentioned performance cassette may be in the form of a performance vector that can realize self-replication. In addition, the above-mentioned polynucleotide may be introduced into a host cell in its own form and linked to a sequence required for expression in an operable manner in the host cell, and is not limited thereto.

另外,於上述內容中,用語"以可進行動作的方式連接"是指使編碼本申請案的目標多肽的聚核苷酸開始轉錄及進行媒介的啟動子序列與上述基因序列功能性地連接。In addition, in the above-mentioned content, the term "linked in an actionable manner" means that the polynucleotide encoding the target polypeptide of the present application starts transcription and mediates the promoter sequence to be functionally linked to the aforementioned gene sequence.

本申請案的用語"非變形微生物"是指天然型菌株本身、不包括本申請案的蛋白質變異體的微生物、或未以包括編碼本申請案的蛋白質變異體的聚核苷酸的載體轉形的微生物。The term "non-modified microorganism" in this application refers to the natural strain itself, a microorganism that does not include the protein variant of the present application, or a vector that does not include the polynucleotide encoding the protein variant of the present application. Of microorganisms.

本申請案的"微生物"只要為可生產丁二胺的微生物,則可包括原核微生物及真核微生物中的任一者。As long as the "microorganism" in the present application is a microorganism capable of producing butanediamine, it may include any of prokaryotic microorganisms and eukaryotic microorganisms.

於本申請案中,用語"生產丁二胺的微生物"是指天然具有丁二胺生產能力的野生型微生物、或藉由將野生型或變異體導入至無丁二胺生產能力或生產能力明顯較低的母菌株而具有丁二胺生產能力的微生物。具體而言,包括自然或人為地引發遺傳性變形的所有微生物,作為因插入外部基因、強化內在基因的活性、或失活等原因而特定機制弱化或強化的微生物,可以是為了生產目標丁二胺而發生遺傳性變異、或強化活性的微生物。就本申請案的目的而言,本申請案的微生物包括本申請案的蛋白質變異體,因此可增加目標丁二胺的生產能力、生產純度或丁二胺的生產選擇性。具體而言,本申請案的微生物可為如下微生物:丁二胺生物合成路徑內的基因的一部分強化或弱化,或者丁二胺分解路徑內的基因的一部分強化或弱化。就本申請案的目的而言,生產丁二胺的微生物可指特徵如下的微生物:包括上述鳥胺酸脫羧酶變異體,因此欲自培養基中的碳源生成的丁二胺的產量、丁二胺的純度或丁二胺的生產選擇性較野生型或非變形微生物增加增加。於本申請案中,上述"生產丁二胺的微生物"可與"具有丁二胺的生產能力的微生物"或"生產丁二胺的微生物"混用。In this application, the term "microorganisms that produce butanediamine" refers to wild-type microorganisms that naturally have butanediamine production capacity, or by introducing wild-type or variants into non-butanediamine production capacity or obvious production capacity Microorganisms with lower mother strain but with butadiamine production capacity. Specifically, it includes all microorganisms that cause genetic deformation naturally or artificially. As microorganisms that are weakened or strengthened by a specific mechanism due to insertion of external genes, enhancement of the activity of internal genes, or inactivation, etc., it can be used for the production of target diacetyl A microorganism that undergoes genetic mutation or enhanced activity due to amines. For the purpose of this application, the microorganisms of this application include the protein variants of this application, and therefore can increase the production capacity, production purity or production selectivity of the target butanediamine. Specifically, the microorganism of the present application may be a microorganism in which a part of genes in the butanediamine biosynthesis pathway is strengthened or weakened, or a part of the genes in the butanediamine decomposition pathway is strengthened or weakened. For the purpose of this application, a microorganism that produces butanediamine may refer to a microorganism with the following characteristics: including the above-mentioned ornithine decarboxylase variant, and therefore the yield of butanediamine to be produced from the carbon source in the culture medium, and The purity of amine or the selectivity of butanediamine production is increased compared with wild-type or non-deformed microorganisms. In this application, the above-mentioned "microorganisms producing butanediamine" can be mixed with "microorganisms capable of producing butanediamine" or "microorganisms producing butanediamine".

上述生產丁二胺的微生物可為重組微生物。上述重組微生物如上所述。The above-mentioned microorganism producing butanediamine may be a recombinant microorganism. The aforementioned recombinant microorganism is as described above.

生產上述丁二胺的微生物只要可生產丁二胺,則其種類並無特別限制,具體而言,可為屬於棒狀桿菌(Corynebacterium)屬、埃希氏菌(Escherichia)屬、腸桿菌(Enterbacter)屬、歐文氏桿菌(Erwinia)屬、沙雷氏菌(Serratia)屬、普羅威登菌(Providencia)屬及短桿菌(Brevibacterium)屬的微生物,更具體而言,可為屬於棒狀桿菌(Corynebacterium)屬或埃希氏菌(Escherichia)屬的微生物。The microorganisms that produce the above-mentioned butanediamine are not particularly limited as long as they can produce butanediamine. Specifically, they may belong to the genus Corynebacterium, Escherichia, and Enterbacter. ), Erwinia (Erwinia), Serratia, Providencia, and Brevibacterium. More specifically, they may be microorganisms belonging to Corynebacterium ( Corynebacterium) or Escherichia (Escherichia) genus microorganisms.

更進一步具體而言,埃希氏菌屬(Escherichia)微生物可為大腸桿菌(Escherichia coli),棒狀桿菌(Corynebacterium)屬微生物可為谷胺酸棒狀桿菌(Corynebacterium glutamicum)、產胺棒狀桿菌(Corynebacterium ammoniagenes)、克氏棒狀桿菌(Corynebacterium crudilactis)、荒漠棒狀桿菌(Corynebacterium deserti)、高效棒狀桿菌(Corynebacterium efficiens)、帚石南棒狀桿菌(Corynebacterium callunae)、停滯棒狀桿菌(Corynebacterium stationis)、奇棒狀桿菌(Corynebacterium singulare)、耐鹽棒狀桿菌(Corynebacterium halotolerans)、紋狀體棒狀桿菌(Corynebacterium striatum)、污染棒狀桿菌(Corynebacterium pollutisoli)、亞胺棒狀桿菌(Corynebacterium imitans)、睾丸棒狀桿菌(Corynebacterium testudinoris)或微黃棒狀桿菌(Corynebacterium flavescens)等,且可為谷胺酸棒狀桿菌(Corynebacterium glutamicum),但可無限制地包括屬於可導入或強化鳥胺酸脫羧酶蛋白質而增加丁二胺的產量、丁二胺的純度、丁二胺的生產選擇性的棒狀桿菌屬或埃希氏菌屬的微生物。More specifically, the microorganism of the genus Escherichia may be Escherichia coli, and the microorganism of the genus Corynebacterium may be Corynebacterium glutamicum or Corynebacterium amine-producing (Corynebacterium ammoniagenes), Corynebacterium crudilactis, Corynebacterium deserti, Corynebacterium efficiens, Corynebacterium callunae, Corynebacterium callunae, Corynebacterium deserti stationis), Corynebacterium singulare, Corynebacterium halotolerans, Corynebacterium striatum, Corynebacterium pollutisoli, Corynebacterium imitans ), Corynebacterium testudinoris (Corynebacterium testudinoris) or Corynebacterium flavescens (Corynebacterium flavescens), etc., and it can be Corynebacterium glutamicum, but it can include without limitation those that can introduce or strengthen ornithine Decarboxylase proteins to increase the production of butanediamine, the purity of butanediamine, and the production of butanediamine is selective for microorganisms of the genus Corynebacterium or Escherichia.

於本申請案中,生產以表現鳥胺酸脫羧酶蛋白質或上述蛋白質的變異體的方式變形的丁二胺的微生物的母菌株只要為生產丁二胺的微生物,則並無特別限制。In the present application, the mother strain of a microorganism that produces butanediamine deformed to express ornithine decarboxylase protein or a variant of the aforementioned protein is not particularly limited as long as it is a microorganism that produces butanediamine.

棒狀桿菌屬微生物雖無丁二胺的生物合成路徑,但若自外部導入鳥胺酸脫羧酶(ornithine decarboxylase,ODC),則可合成丁二胺。Although the microorganisms of the genus Corynebacterium do not have a biosynthetic pathway for butanediamine, if ornithine decarboxylase (ODC) is introduced from the outside, butanediamine can be synthesized.

另外,生產丁二胺的上述微生物並無特別限制,進而可為如下者:鳥胺酸中參與精胺酸合成的鳥胺酸胺基甲醯轉移酶(ornithine carbamoyltransfrase,ArgF)、參與麩胺酸的排出的蛋白質(NCgl1221)失活者。In addition, the above-mentioned microorganisms that produce butanediamine are not particularly limited, and may be the following: ornithine carbamoyltransfrase (ArgF) involved in the synthesis of arginine in ornithine, and glutamine The excreted protein (NCgl1221) is inactivated.

另外,生產丁二胺的上述微生物並無特別限制,例如可為如下者:為了強化自麩胺酸至鳥胺酸的生物合成路徑,將麩胺酸轉化為乙醯谷胺酸(N-acetylglutamate)的乙醯谷胺酸合酶、或將乙醯鳥胺酸轉化為鳥胺酸的鳥胺酸乙醯轉移酶(ArgJ)、將乙醯谷胺酸轉化為乙醯谷胺醯磷酸(N-acetylglutamyl phosphate)的乙醯谷胺酸激酶(ArgB)、將乙醯谷胺醯磷酸轉化為乙醯谷胺酸半醛(N-acetylglutamate semialdehyde)的乙醯谷胺醯-磷酸還原酶(ArgC)、將乙醯谷胺酸半醛轉化為乙醯鳥胺酸(N-acetylornithine)的乙醯鳥胺酸轉胺酶(ArgD)的活性較內在活性強化,從而用作丁二胺的生物合成原料的鳥胺酸的生產性提高。In addition, the above-mentioned microorganisms that produce butanediamine are not particularly limited. For example, they may be the following: in order to strengthen the biosynthesis pathway from glutamate to ornithine, convert glutamate to acetylglutamate (N-acetylglutamate ) Acetoglutamate synthase, or ornithine acetyltransferase (ArgJ), which converts acetoglutamate to ornithine, converts acetoglutamate to acetoglutamate phosphate (N -Acetylglutamate kinase (ArgB) of acetylglutamyl phosphate, acetylglutamate-phosphate reductase (ArgC) that converts acetylglutamyl phosphate into N-acetylglutamate semialdehyde (N-acetylglutamate semialdehyde) , The activity of acetylornithine transaminase (ArgD), which converts acetylornithine semialdehyde into N-acetylornithine, is stronger than its intrinsic activity, so it can be used as a raw material for the biosynthesis of butanediamine The productivity of ornithine is improved.

另外,生產丁二胺的上述微生物並無特別限制,可進而為丁二胺乙醯轉移酶的活性弱化且具有丁二胺的生產能力的棒狀桿菌屬微生物。而且,生產上述丁二胺的微生物並無特別限制,可為丁二胺排出蛋白質的活性強化者,但並不限制於此。In addition, the above-mentioned microorganisms that produce butanediamine are not particularly limited, and may further be Corynebacterium microorganisms that have weakened butanediamine acetyltransferase activity and have the ability to produce butanediamine. In addition, the microorganism that produces the above-mentioned butanediamine is not particularly limited, and may be those that enhance the activity of butanediamine to excrete proteins, but it is not limited thereto.

於本申請案中,用語"強化/增加"為包括活性較內在活性增加的所有概念。In this application, the term "enhance/increase" includes all concepts that the activity is increased compared to the intrinsic activity.

可藉由應用本領域內所熟知的各種方法而達成此種基因活性的強化或增加。作為上述方法的示例,可包括選自由如下方法所組成的族群中的任一種以上的方法,亦可藉由其組合達成,但並不特別限制於上述示例:增加基因的細胞內複製數;將變異導入至基因的表現調節序列的方法;將基因表現調節序列更換為活性強烈的序列的方法;進而將變異導入至相應基因以強化基因的活性的方法;及將外來基因導入至微生物的方法。The enhancement or increase of such gene activity can be achieved by applying various methods well known in the art. As an example of the above method, it may include any one or more methods selected from the group consisting of the following methods, and can also be achieved by a combination thereof, but is not particularly limited to the above example: increase the number of intracellular copies of genes; Methods of introducing mutations into gene expression regulatory sequences; methods of replacing gene expression regulatory sequences with sequences with strong activity; methods of introducing mutations into corresponding genes to enhance gene activity; and methods of introducing foreign genes into microorganisms.

於本申請案中,用語"失活"為包括活性較內在活性弱化或無活性的所有概念。In this application, the term "inactivation" includes all concepts that the activity is weakened or inactive compared to the intrinsic activity.

可藉由應用本領域內所熟知的各種方法而達成此種基因活性的失活。作為上述方法的示例,有如下等方法,亦可藉由其組合而達成,但並不特別限制於上述示例:包括去除上述基因的活性的情形在內而使染色體上的基因整體或一部分缺失的方法;將染色體上的編碼上述蛋白質的基因替代為以減少相應蛋白質的活性的方式突變的基因的方法;將變異導入至編碼上述蛋白質的染色體上的基因的表現調節序列的方法;將編碼上述蛋白質的基因的表現調節序列更換為活性較弱或無活性的序列的方法(例如,將上述基因的啟動子更換為弱於內在啟動子的啟動子的方法);使編碼上述蛋白質的染色體上的基因整體或一部分缺失的方法;導入互補結合至上述染色體上的基因的轉錄體而阻礙自上述mRNA轉譯為蛋白質的反義寡核苷酸(例如,反義RNA)的方法;於編碼上述蛋白質的基因的SD序列前端人為地附加與SD序列互補的序列而形成二級結構物來使核糖體(ribosome)無法附著的方法;及以逆轉錄至相應序列的開放閱讀框(open reading frame,ORF)的3'末端的方式附加啟動子的逆轉錄工程(Reverse transcription engineering,RTE)方法等。於本申請案中,用語"內在活性"是指於因自然或人為因素引起的遺傳性變異而微生物轉形的情形時,轉形前的母菌株原本所具有的特定蛋白質的活性。The inactivation of such gene activity can be achieved by applying various methods well known in the art. As an example of the above method, there are the following methods, which can also be achieved by a combination thereof, but are not particularly limited to the above example: including the case where the activity of the above gene is removed, and the whole or part of the gene on the chromosome is deleted Method; a method of replacing the gene encoding the aforementioned protein on the chromosome with a gene mutated in a manner that reduces the activity of the corresponding protein; a method of introducing a mutation into the expression regulatory sequence of the gene on the chromosome encoding the aforementioned protein; The method of replacing the expression regulatory sequence of the gene with a weaker or inactive sequence (for example, a method of replacing the promoter of the aforementioned gene with a promoter weaker than the intrinsic promoter); making the gene on the chromosome encoding the aforementioned protein The method of deleting the whole or part of the gene; the method of introducing the transcript of the gene complementary to the above-mentioned chromosome and preventing the translation of the above-mentioned mRNA into protein (for example, antisense RNA); for the gene encoding the above-mentioned protein A method of artificially appending a sequence complementary to the SD sequence at the front end of the SD sequence to form a secondary structure so that the ribosome cannot be attached; and reverse transcription to the open reading frame (ORF) of the corresponding sequence Reverse transcription engineering (Reverse transcription engineering, RTE) method, etc., with a promoter attached to the 3'end. In this application, the term "intrinsic activity" refers to the activity of a specific protein originally possessed by the mother strain before the transformation when the microorganism is transformed due to genetic variation caused by natural or human factors.

作為本申請案的又一實施方式,提供一種包括於培養基培養生產丁二胺的上述微生物的步驟的丁二胺生產方法。As yet another embodiment of the present application, there is provided a method for producing butanediamine including the step of culturing the above-mentioned microorganism that produces butanediamine in a medium.

上述丁二胺、包括SEQ ID NO:1的胺基酸序列的鳥胺酸脫羧酶、其變異體、蛋白質的表現及微生物如上所述。The above-mentioned butanediamine, ornithine decarboxylase including the amino acid sequence of SEQ ID NO:1, its variants, protein expression and microorganisms are as described above.

於本申請案中,用語"培養"是指使上述微生物於適當調節的環境條件下生長。本申請案的培養過程可藉由業界內已知的適當的培養基與培養條件實現。業者可根據所選擇的菌株容易地進行調整而使用此種培養過程。具體而言,上述培養可為分批式、連續式及流加式,但並不限制於此。In this application, the term "cultivation" refers to the growth of the above-mentioned microorganisms under appropriately adjusted environmental conditions. The cultivation process of this application can be realized by the appropriate medium and cultivation conditions known in the industry. The industry can easily adjust and use this kind of culture process according to the selected strain. Specifically, the above-mentioned culture may be batch type, continuous type and fed-batch type, but it is not limited thereto.

於本申請案中,用語"培養基"是指將培養上述微生物所需的營養物質作為主成分混合的物質,包括存活及發育中不可或缺的水在內而供給營養物質及發育因子等。具體而言,用於培養本申請案的微生物的培養基及其他培養條件只要為用於培養普通微生物的培養基,則無特別限制地使用任一培養基,但可於含有適當的碳源、氮源、磷、無機化合物、胺基酸及/或維生素等的普通培養基中,於好氧條件下調節溫度、pH值等而培養本申請案的微生物。In this application, the term "medium" refers to a substance mixed with nutrients required for cultivating the above-mentioned microorganisms as main components, including water that is indispensable for survival and development to supply nutrients and growth factors. Specifically, as long as the medium and other culture conditions used to cultivate the microorganisms of the present application are medium for cultivating common microorganisms, any medium can be used without particular limitation, but may contain appropriate carbon sources, nitrogen sources, The microorganism of the present application is cultivated in a common medium of phosphorus, inorganic compounds, amino acids and/or vitamins, etc., under aerobic conditions by adjusting temperature, pH, etc.

於上述方法中,培養上述微生物的步驟並無特別限制,可藉由公知的分批式培養方法、連續式培養方法、流加式培養方法等而執行。此時,培養條件並無特別限制,可使用鹼性化合物(例如,氫氧化鈉、氫氧化鉀或胺)或酸性化合物(例如,磷酸或硫酸)來調節適當大pH值(例如,pH5至pH9,具體而言為pH6至pH8,最具體而言為pH6.8),可將氧氣或含氧氣體混合物導入至培養物而保持好氧條件。培養溫度可保持20℃至45℃,具體而言為25℃至40℃,可培養約10小時至160小時,但並不限制於此。藉由上述培養生產的丁二胺可分泌至培養基中或殘留於細胞內。In the above method, the step of culturing the above microorganism is not particularly limited, and can be performed by a well-known batch culture method, continuous culture method, fed-batch culture method, and the like. At this time, the culture conditions are not particularly limited, and alkaline compounds (for example, sodium hydroxide, potassium hydroxide, or amines) or acidic compounds (for example, phosphoric acid or sulfuric acid) can be used to adjust an appropriately large pH value (for example, pH 5 to pH 9). , Specifically pH 6 to pH 8, and most specifically pH 6.8), oxygen or oxygen-containing gas mixture can be introduced into the culture to maintain aerobic conditions. The culture temperature may be maintained at 20°C to 45°C, specifically 25°C to 40°C, and the culture may be about 10 hours to 160 hours, but is not limited thereto. The butanediamine produced by the above-mentioned culture can be secreted into the medium or left in the cells.

而且,使用的培養用培養基可單獨使用或混合使用糖及碳水化合物(例如,葡萄糖、蔗糖、乳糖、果糖、麥芽糖、糖蜜、澱粉及纖維素)、油脂及脂肪(例如,大豆油、葵花籽油、花生油及椰子油)、脂肪酸(例如,棕櫚酸、硬脂酸及亞麻油酸)、醇(例如,甘油及乙醇)及有機酸(例如,乙酸)等作為碳供給源,但並不限制於此。可單獨使用或混合使用含氮有機化合物(例如,蛋白腖、酵母萃取液、肉汁、麥芽萃取液、玉米漿、大豆粕粉及尿素)、或無機化合物(例如,硫酸銨、氯化銨、磷酸銨、碳酸銨及硝酸銨)等作為氮供給源,但並不限制於此。可單獨使用或混合使用磷酸二氫鉀、磷酸氫二鉀、與其相應的含鈉鹽等作為磷供給源,但並不限制於此。另外,培養基可包括其他金屬鹽(例如,硫酸鎂或硫酸鐵)、胺基酸及如維生素的必需生長促進物質。Furthermore, the culture medium used can be used alone or in combination with sugars and carbohydrates (for example, glucose, sucrose, lactose, fructose, maltose, molasses, starch and cellulose), oils and fats (for example, soybean oil, sunflower oil) , Peanut oil and coconut oil), fatty acids (e.g. palmitic acid, stearic acid and linoleic acid), alcohols (e.g. glycerol and ethanol) and organic acids (e.g. acetic acid) as carbon sources, but are not limited to this. Nitrogen-containing organic compounds (for example, egg whites, yeast extract, gravy, malt extract, corn steep liquor, soybean meal and urea) or inorganic compounds (for example, ammonium sulfate, ammonium chloride, phosphoric acid) can be used alone or in combination. Ammonium, ammonium carbonate, and ammonium nitrate) are used as nitrogen supply sources, but are not limited thereto. Potassium dihydrogen phosphate, dipotassium hydrogen phosphate, and the corresponding sodium-containing salt can be used alone or in combination as the phosphorus supply source, but it is not limited thereto. In addition, the culture medium may include other metal salts (for example, magnesium sulfate or iron sulfate), amino acids, and essential growth promoting substances such as vitamins.

回收本申請案的上述培養步驟中生產的丁二胺的方法可根據培養方法利用本領域內公知的適當的方法自培養液收集目標胺基酸。例如,可使用離心分離、過濾、陰離子交換層析法、結晶化及高效液相層析法(High Performance Liquid Chromatography,HPLC)等,可利用本領域內公知的適當的方法自培養基或微生物回收目標丁二胺。回收上述丁二胺的方法可更包括精製步驟。The method of recovering the butanediamine produced in the above-mentioned culture step of the present application can collect the target amino acid from the culture solution by an appropriate method known in the art according to the culture method. For example, centrifugal separation, filtration, anion exchange chromatography, crystallization and high performance liquid chromatography (High Performance Liquid Chromatography, HPLC) etc. can be used, and an appropriate method known in the art can be used to recover the target from the culture medium or microorganism. Butanediamine. The method for recovering the above-mentioned butanediamine may further include a refining step.

作為本申請案的又一實施方式,提供一種包括培養生產上述丁二胺的微生物的步驟的提高丁二胺的純度的方法。另外,提供一種包括培養生產上述丁二胺的微生物的步驟的增加丁二胺相對於戊二胺的比率的方法。上述丁二胺及微生物如上所述。As another embodiment of the present application, there is provided a method for improving the purity of butanediamine including the step of cultivating the above-mentioned butanediamine-producing microorganism. In addition, there is provided a method of increasing the ratio of butanediamine to pentamethylenediamine including the step of cultivating the above-mentioned butanediamine-producing microorganism. The above-mentioned butanediamine and microorganisms are as described above.

作為本申請案的又一實施方式,提供一種培養生產上述丁二胺的微生物而製備的丁二胺的用以製備聚醯胺的用途。另外,提供一種包括生產上述丁二胺的微生物的聚醯胺製備用組成物。上述丁二胺及微生物如上所述。As another embodiment of the present application, there is provided a use of butanediamine prepared by culturing the above-mentioned butanediamine-producing microorganism to prepare polyamide. In addition, there is provided a polyamide preparation composition including a microorganism that produces the above-mentioned butanediamine. The above-mentioned butanediamine and microorganisms are as described above.

生產上述丁二胺的微生物包括包含如下的鳥胺酸脫羧酶的微生物:包括SEQ ID NO:1的多肽、或於SEQ ID NO:1的a)第713個、b)第698個或c)與第713個及第698個相應的位置包括胺基酸取代,於SEQ ID NO:1的多肽包括具有至少80%以上且未滿100%的序列同源性的多肽。另外,培養上述生產丁二胺的微生物的步驟包括培養包括如下的鳥胺酸脫羧酶的微生物的步驟:包括SEQ ID NO:1的多肽、或於SEQ ID NO:1的a)第713個、b)第698個或c)與第713個及第698個相應的位置包括胺基酸取代,於SEQ ID NO:1的多肽包括具有至少80%以上且未滿100%的序列同源性的多肽。The microorganisms that produce the above-mentioned butanediamine include microorganisms comprising the following ornithine decarboxylase: including the polypeptide of SEQ ID NO:1, or a) the 713th, b) the 698th or c) of SEQ ID NO:1 The positions corresponding to the 713th and 698th positions include amino acid substitutions. The polypeptide in SEQ ID NO:1 includes a polypeptide having a sequence homology of at least 80% and less than 100%. In addition, the step of cultivating the above-mentioned butanediamine-producing microorganism includes the step of cultivating a microorganism including the following ornithine decarboxylase: including the polypeptide of SEQ ID NO:1, or the 713th, a) of SEQ ID NO:1, b) The 698th or c) The positions corresponding to the 713th and 698th positions include amino acid substitutions. The polypeptide of SEQ ID NO:1 includes those with at least 80% sequence homology and less than 100% Peptides.

上述聚醯胺作為活用於各種素材的物質,因醯胺鍵間的氫鍵而耐熱性、耐藥品性等優異,因此開發為各種素材的材料。例如,上述聚醯胺可為纖維原料,具體而言可為尼龍的原料。聚醯胺纖維於高強度、耐磨耗性、柔軟性、光澤特性、染色鮮明性等方面具有優異的特徵,因此可用於絲襪等腿部穿戴物(leg wear)、內衣(inner wear)、運動裝(sports wear)等服飾類製品。另外,上述聚醯胺可為醫藥品、界面活性劑、膜、塑膠等的原料。例如,於利用聚醯胺製備膜的情形時,可實現優異的光學物性及機械物性,同時亦具備柔軟性,因此可用作各種成形品的材料,上述聚醯胺膜可應用於顯示用基板、顯示用保護膜、觸控面板、摺疊式設備的窗蓋等。 [發明效果]The above-mentioned polyamides are used as materials for various materials, and are excellent in heat resistance, chemical resistance, etc. due to the hydrogen bonds between the amide bonds, and therefore have been developed as materials for various materials. For example, the above-mentioned polyamide may be a fiber raw material, specifically, a nylon raw material. Polyamide fibers have excellent characteristics in terms of high strength, abrasion resistance, flexibility, gloss characteristics, and vividness of dyeing. Therefore, they can be used for leg wear such as stockings, inner wear, and sports. Clothing products such as sports wear. In addition, the above-mentioned polyamide can be a raw material for pharmaceuticals, surfactants, films, plastics, and the like. For example, in the case of using polyamide to prepare a film, it can achieve excellent optical properties and mechanical properties, as well as flexibility. Therefore, it can be used as a material for various molded products. The above polyamide film can be applied to a display substrate , Display protective film, touch panel, window cover of folding equipment, etc. [Invention Effect]

本申請案的鳥胺酸脫羧酶具有增大丁二胺的生產性或生產效率且抑制副反應的效果。特別是,本申請案具有阻礙作為鳥胺酸脫羧酶的副反應之一的戊二胺合成的效果,因此達成簡化丁二胺精製/分離製程且減少生產費用的效果。The ornithine decarboxylase of the present application has the effect of increasing the productivity or production efficiency of butanediamine and suppressing side reactions. In particular, the present application has the effect of hindering the synthesis of pentanediamine, which is one of the side reactions of ornithine decarboxylase, and thus achieves the effect of simplifying the purification/separation process of butanediamine and reducing production costs.

另外,本申請案可藉由量產丁二胺而實現聚合物前驅物、醫藥品、化學添加劑等的各種活用。In addition, this application can realize various utilizations of polymer precursors, pharmaceuticals, chemical additives, etc. by mass production of butanediamine.

以下,藉由實施例而更詳細地對本申請案進行說明。然而,上述實施例用以例示性地對本申請案進行說明,本申請案的範圍並不限制於上述實施例,對於本申請案所屬的技術領域內具有常識者而言是顯而易見的。Hereinafter, the present application will be described in more detail through examples. However, the above-mentioned embodiments are used to exemplarily describe the present application, and the scope of the present application is not limited to the above-mentioned embodiments, which is obvious to those with common sense in the technical field to which the present application belongs.

實施例 1. 各種來源的鳥胺酸脫羧酶的活性比較 對來自四種微生物的鳥胺酸脫羧酶的基質的反應性進行比較。以來自雞源乳桿菌(Lactobacillus saerimneri (誘導型))、釀酒酵母(saccharomyces cerevisiae (誘導型))、大腸桿菌(E.coli(組成型))、大腸桿菌(E.coli(誘導型))的野生型鳥胺酸脫羧酶為對象,將其分別標記為ODC_Lb、ODC_Sc、ODC_Ec、ODC_Ef。將與上述酶相應的基因插入至pET24ma載體後,利用大腸桿菌BL21(DE3)於0.1 mM的異丙基硫代半乳糖苷(Isopropyl Thiogalactoside,IPTG)及18℃的條件下表現蛋白質。此後,利用10%細胞萃取物於45℃下比較初始反應速度。分別對使用4 m的鳥胺酸作為基質的情形與使用4 mM的離胺酸作為基質的情形進行比較。 Example 1. Comparison of the activity of ornithine decarboxylase from various sources The reactivity of the substrates of ornithine decarboxylase from four microorganisms was compared. Based on chicken-derived Lactobacillus (Lactobacillus saerimneri (inducible)), Saccharomyces cerevisiae (inducible), Escherichia coli (E.coli (constitutive)), Escherichia coli (E.coli (inducible)) The wild-type ornithine decarboxylase is the target, which is labeled ODC_Lb, ODC_Sc, ODC_Ec, ODC_Ef. After inserting the gene corresponding to the above enzyme into the pET24ma vector, E. coli BL21 (DE3) was used to express the protein under the conditions of 0.1 mM Isopropyl Thiogalactoside (IPTG) and 18°C. After that, the initial reaction rate was compared with 10% cell extract at 45°C. Compare the case of using 4 mM ornithine as the substrate and the case of using 4 mM lysine as the substrate.

圖2表示來自上述四種微生物的ODC酶的活性。具體而言,表示將鳥胺酸用作基質而生產丁二胺的鳥胺酸脫羧酶活性、及將離胺酸用作基質而生產戊二胺的離胺酸脫羧酶活性。離胺酸脫羧酶活性全部相似,但來自乳桿菌的鳥胺酸脫羧酶(ODC_Lb)的鳥胺酸脫羧酶活性最優異。即,於ODC_Lb中,離胺酸脫羧酶活性相對於鳥胺酸脫羧酶活性、即副反應的生成比率最低,因此基於如上所述的內容製作變異體。Figure 2 shows the activity of ODC enzymes from the above four microorganisms. Specifically, it means ornithine decarboxylase activity that produces butanediamine using ornithine as a substrate, and lysine decarboxylase activity that produces pentane diamine using lysine as a substrate. The activities of lysine decarboxylase are all similar, but the ornithine decarboxylase from Lactobacillus (ODC_Lb) has the best activity. That is, in ODC_Lb, the lysine decarboxylase activity relative to the ornithine decarboxylase activity, that is, the generation ratio of side reactions is the lowest, and therefore the variants were prepared based on the above-mentioned content.

實施例 2. 鳥胺酸脫羧酶的變異位置的選擇 已知乳桿菌鳥胺酸脫羧酶的結晶結構,可藉由分析結構預測基質進出酶的隧道。為了選擇預測的隧道部分中執行飽和變異的功能性殘基(functional residues),執行利用生物資訊學的序列資訊的多序列排列(multiple sequence alignment),自本發明中利用的鳥胺酸脫羧酶胺基酸序列的N末端選擇A696、V702、A713、E698的位置作為變異位置。 Example 2. Selection of the mutation position of ornithine decarboxylase The crystal structure of ornithine decarboxylase of Lactobacillus is known, and the tunnel through which the substrate enters and exits the enzyme can be predicted by analyzing the structure. In order to select the functional residues that perform saturation mutation in the predicted tunnel part, multiple sequence alignment using sequence information from bioinformatics is performed, from the ornithine decarboxylase amine used in the present invention. The positions of A696, V702, A713, and E698 were selected as the mutation positions for the N-terminus of the base acid sequence.

於蛋白質結構內保存有特定位置的胺基酸殘基的殘基於上述蛋白質中在結構與功能方面發揮非常重要的作用,特別是於觸媒過程中發揮直接作用的可能性較高,故而排除其為變異殘基。Residues that store amino acid residues at specific positions in the protein structure play a very important role in the structure and function of the above-mentioned protein. In particular, they are more likely to play a direct role in the catalytic process, so they are excluded. Is a variant residue.

實施例 3. 對鳥胺酸脫羧 酶的功能性殘基執行飽和變異及探索變異體 飽和變異(saturation mutagenesis)是指於基因的指定位置導入各種鹼基序列的變化。飽和變異是指於鍵結至模板鏈的互補序列的引子(primer)上插入NNK密碼子(codon)來代替欲使變異的序列來藉由聚合酶鏈反應(Polymerase Chain Reaction,PCR)插入變異。此時,於NNK密碼子中,N是指核苷酸的A、T、G、C,K是指T、G。 Example 3. Functional residues of ornithine decarboxylase embodiment performs saturation variation and explore variants variants saturated (saturation mutagenesis) is specified position refers to a gene into various changes in the nucleotide sequence. Saturation mutation refers to inserting the NNK codon (codon) in the primer of the complementary sequence of the template strand to replace the sequence to be mutated to insert the mutation by polymerase chain reaction (PCR). At this time, in the NNK codon, N refers to A, T, G, and C of nucleotides, and K refers to T, G.

使用NNK密碼子對所選擇的功能性殘基執行飽和變異後,對變異體庫執行篩選。所有庫藉由全細胞反應進行一次及二次篩選。上述全細胞反應是指如下反應:對包括特定酶的細胞進行粉碎而利用細胞內容物,或不對酶進行分離精製而利用完整的細胞整體。藉由鳥胺酸全細胞反應進行一次篩選,選擇與野生型進行比較時表現出相似或更快的活性的變異體作為吸光度的變化。藉由離胺酸全細胞反應進行二次篩選,對於在一次篩選的篩選出的變異體,若對離胺酸的反應性低於野生型,則選擇。After using NNK codons to perform saturation mutation on the selected functional residues, perform screening on the variant library. All libraries are screened once and twice by whole cell reaction. The above-mentioned whole-cell reaction refers to a reaction in which cells including a specific enzyme are crushed and the cell contents are used, or the whole cell is used without isolating and purifying the enzyme. A screening is performed by the whole cell reaction of ornithine acid, and a variant that shows similar or faster activity when compared with the wild type is selected as the change in absorbance. The secondary screening is performed by whole-cell lysine reaction, and the variants selected in the first screening are selected if their reactivity to lysine is lower than that of the wild type.

對於篩選出的變異體酶,測定使用鳥胺酸或離胺酸作為基質時的比活度。比活度(specific activity)表示藉由酶精製去除雜質及其他蛋白質的純蛋白質的單位活性,通常以1分鐘促進1 μmol的基質變化的酶量為單位而表示為每1 mg的單位數。具體而言,將來自乳桿菌的野生型及變異體的鳥胺酸脫羧酶轉形至大腸桿菌BL21(DE3)而利用作為誘導體的IPTG以50 mL的培養體積表現後,利用Ni-NTA管柱僅精製純蛋白質。首先,於蛋白質表現後,藉由音波粉碎機對細胞進行粉碎,於離心分離後獲得細胞萃取液。將細胞萃取液放入至藉由添加有300 mM的氯化鈉的50 mM磷酸鹽(phosphate)緩衝液(pH8.0)平衡化的管柱而於0℃下與鎳樹脂(resin)結合1小時。此後,將未能與樹脂結合的蛋白質流棄,藉由包括50 mM咪唑的Tris緩衝液去除非特異性地結合的其他蛋白質。最後,利用包括250 mM咪唑的Tris緩衝液僅溶出所期望的蛋白質。為了自溶出的蛋白質去除咪唑,執行利用過濾管柱的脫鹽過程而最終僅獲得有活性的蛋白質。此後,使用布拉德福(Bradford)蛋白質定量套組測定蛋白質量,使用相同量的蛋白質測定比活度。For the selected variant enzymes, the specific activity when ornithine or lysine is used as the substrate is measured. Specific activity refers to the unit activity of pure protein that is purified by enzymes to remove impurities and other proteins. It is usually expressed as the number of units per 1 mg in units of the amount of enzyme that promotes 1 μmol of matrix changes in 1 minute. Specifically, ornithine decarboxylase derived from wild-type and variants of Lactobacillus was transformed into E. coli BL21 (DE3) and expressed in a culture volume of 50 mL using IPTG as an inducer, and then a Ni-NTA tube The column only refines pure protein. First, after protein expression, the cells are crushed by a sonic crusher, and the cell extract is obtained after centrifugal separation. The cell extract was put into a column equilibrated with 50 mM phosphate buffer (pH 8.0) added with 300 mM sodium chloride and combined with nickel resin (resin) at 0°C 1 hour. After that, the proteins that failed to bind to the resin were discarded, and other proteins that were not specifically bound were removed by Tris buffer including 50 mM imidazole. Finally, a Tris buffer containing 250 mM imidazole was used to dissolve only the desired protein. In order to remove imidazole from the eluted protein, a desalting process using a filter column is performed to obtain only active protein in the end. Thereafter, the Bradford protein quantification kit was used to determine the protein quality, and the same amount of protein was used to determine the specific activity.

藉由HPLC(High-performance liquid chromatography)分析法測定將鳥胺酸或離胺酸用作基質時的來自乳桿菌的野生型及變異體的鳥胺酸脫羧酶的比活度。於50℃下執行30分鐘至300分鐘的反應而求出三次實驗的平均值。測定表現出10%至25%的轉化產率時的初始反應速度。使用陽離子交換管柱,流動相包括0.6 g/L檸檬酸、4 g/L酒石酸、1.4 g/L乙二胺、5%甲醇及95%水。所使用的pH緩衝液於pH5.0的情形時,使用檸檬酸鹽緩衝液(citric-sodium citrate buffer)。野生型及變異體的鳥胺酸脫羧酶的比活度如圖3所示。The specific activity of ornithine decarboxylase derived from wild-type and variants of Lactobacillus when ornithine or lysine is used as a substrate is measured by HPLC (High-performance liquid chromatography) analysis method. The reaction was performed at 50°C for 30 minutes to 300 minutes, and the average value of three experiments was obtained. The initial reaction rate when a conversion yield of 10% to 25% is shown is determined. Using a cation exchange column, the mobile phase includes 0.6 g/L citric acid, 4 g/L tartaric acid, 1.4 g/L ethylenediamine, 5% methanol and 95% water. When the pH buffer used is at pH 5.0, use citric-sodium citrate buffer. The specific activity of ornithine decarboxylase of wild type and variants is shown in Figure 3.

如圖3(a)及圖3(b)所示,確認野生型及變異體(A696E、V702G、A713L、A696E/A713L、V702G/A713L、A696E/V702G/A713L、E698D及E698D/A713L)酶的比活度,結果確認到上述功能性殘基(A696、V702、A713、E698)均位於活性部位(active site)或基質接近隧道。As shown in Figure 3(a) and Figure 3(b), the wild-type and variants (A696E, V702G, A713L, A696E/A713L, V702G/A713L, A696E/V702G/A713L, E698D and E698D/A713L) enzyme Specific activity, the results confirmed that the above functional residues (A696, V702, A713, E698) are located in the active site (active site) or matrix close to the tunnel.

具體而言,於使用鳥胺酸作為基質時,確認到變異體(A696E、V702G、A713L、A696E/A713L、V702G/A713L、A696E/V702G/A713L、E698D、E698D/A713L)的比活度相對於野生型的比活度分別為19.9%、4.3%、89.4%、12.8%、4.9%、0.1%、75.6%、74.4%(圖3(a))。Specifically, when ornithine was used as a substrate, it was confirmed that the specific activity of the variants (A696E, V702G, A713L, A696E/A713L, V702G/A713L, A696E/V702G/A713L, E698D, E698D/A713L) was relative to The specific activities of the wild type were 19.9%, 4.3%, 89.4%, 12.8%, 4.9%, 0.1%, 75.6%, 74.4% (Figure 3(a)).

於使用離胺酸作為基質時,變異體(A696E、V702G、A713L、A696E/A713L、V702G/A713L、A696E/V702G/A713L、E698D、E698D/A713L)酶的比活度相對於野生型酶的比活度分別為16.9%、0.6%、42.4%、4.4%、0.9%、0.7%、50.8%、29.2%而確認到副反應得到抑制(圖3(b))。When using lysine as a substrate, the ratio of the specific activity of the variant (A696E, V702G, A713L, A696E/A713L, V702G/A713L, A696E/V702G/A713L, E698D, E698D/A713L) to the wild-type enzyme The activities were 16.9%, 0.6%, 42.4%, 4.4%, 0.9%, 0.7%, 50.8%, 29.2%, and it was confirmed that side reactions were suppressed (Figure 3(b)).

實施例 4. 確認鳥胺酸脫羧酶的功能性殘基的動力學係數 更細緻地確認上述實施例3中所使用的鳥胺酸脫羧酶變異體中具有70%以上的比活度的變異體A713L、E698D及E698D/A713L的特性。為了比較上述變異體及野生型的動力學係數(Kinetic parameter),利用各種濃度條件的離胺酸。動力學係數利用具有不同的濃度的基質溶液來表示酶的基質親和度及基質轉化能力數值。 Example 4. Confirmation of the kinetic coefficients of the functional residues of ornithine decarboxylase. More detailed confirmation of the variants of ornithine decarboxylase used in the above example 3 that have a specific activity of 70% or more Features of A713L, E698D and E698D/A713L. In order to compare the kinetic parameters of the above variant and wild type, lysine with various concentration conditions was used. The kinetic coefficient uses matrix solutions with different concentrations to represent the matrix affinity and matrix conversion capacity values of enzymes.

具體而言,為了確認完成蛋白質精製的野生型及變異體的鳥胺酸脫羧酶的離胺酸的動力學係數,使用0.45 mM至140 mM的離胺酸濃度。pH緩衝液使用pH5.0檸檬酸鹽緩衝液(citric-sodium citrate buffer),於200μl的反應體積下進行。藉由所明示的上述HPLC分析方法進行分析,求出三次實驗的平均值。野生型及變異體的離胺酸去羧酶的動力學係數如圖4所示。Specifically, in order to confirm the kinetic coefficient of lysine of wild-type and variant ornithine decarboxylase that has completed protein purification, a lysine concentration of 0.45 mM to 140 mM is used. The pH buffer is pH5.0 citrate buffer (citric-sodium citrate buffer), and the reaction volume is 200μl. The analysis was performed by the above-mentioned HPLC analysis method as indicated, and the average value of three experiments was obtained. The kinetic coefficients of wild-type and variant lysine decarboxylase are shown in Figure 4.

如圖4所示,確認到變異體(A713L)的離胺酸的kcat 值較與野生型下降2.16倍。確認到因kcat 值的減小而變異體(A713L)的離胺酸的kcat /KM 值較野生型減少1.93倍。其結果,確認到變異體(A713L)可降低離胺酸脫羧酶活性。確認到變異體E698D及E698D/A713L的離胺酸的kcat 值亦分別降低2.08倍與2.59倍,且確認到離胺酸的kcat /KM 值減小1.28倍及1.67倍。即,確認到上述變異體可減少副反應。As shown in Figure 4, it was confirmed that the k cat value of the lysine acid of the variant (A713L) was 2.16 times lower than that of the wild type. K cat lysine was confirmed due to the decrease of the value of k cat variants (A713L) is / K M value of 1.93 times compared to the wild-type reduction. As a result, it was confirmed that the variant (A713L) can reduce the activity of lysine decarboxylase. It was confirmed that the k cat values of lysine acid of variants E698D and E698D/A713L were also reduced by 2.08 times and 2.59 times, respectively, and the k cat /K M values of lysine acid were confirmed to be reduced by 1.28 times and 1.67 times. That is, it was confirmed that the aforementioned variants can reduce side reactions.

實施例 5. 變異體鳥胺酸脫羧酶的特性分析 欲研究變異體中作為具有最高的鳥胺酸比活度的變異體的鳥胺酸脫羧酶(A713L)對丁二胺或戊二胺的生成產生的影響。分別進行將高濃度51.5 g/L(0.39 M)的鳥胺酸用作基質的情形、及將濃度為2.57 g/L(17.6 mM)的離胺酸用作基質的情形。為了於在兩種基質條件下進行反應時設定適宜的反應條件,於兩種條件(0.1 M或0.37 M)下進行使pH適當的緩衝液濃度。 Example 5. Analysis of the characteristics of the variant ornithine decarboxylase. The ornithine decarboxylase (A713L), which is the variant with the highest specific activity of ornithine among the variants, has the effect of butanediamine or pentanediamine. The impact of generation. A case where a high concentration of 51.5 g/L (0.39 M) ornithine was used as a substrate and a case where a concentration of 2.57 g/L (17.6 mM) lysine was used as a substrate were performed respectively. In order to set the appropriate reaction conditions for the reaction under the two substrate conditions, the buffer concentration was performed under the two conditions (0.1 M or 0.37 M) to make the pH appropriate.

具體而言,於反應中使用0.1 mg的完成蛋白質精製的野生型及變異體酶。使用0.39 M的鳥胺酸或17.6 mM的離胺酸作為基質,使用0.1 M或0.37 M的檸檬酸鹽緩衝液(citric-sodium citrate buffer,pH5.0)作為緩衝液。使用0.1 mM的PLP輔酶,於50℃下進行反應, 以2 mL的反應體積進行。將其結果示於圖5。Specifically, 0.1 mg of wild-type and variant enzymes that completed protein purification were used in the reaction. Use 0.39 M ornithine or 17.6 mM lysine as the matrix, and use 0.1 M or 0.37 M citric-sodium citrate buffer (pH 5.0) as the buffer. Using 0.1 mM PLP coenzyme, the reaction was carried out at 50°C with a reaction volume of 2 mL. The results are shown in Fig. 5.

圖5(a)是將51.5 g/L(0.39 M)的鳥胺酸用作基質的情形。於將鳥胺酸轉化為丁二胺的情形時,在使用0.37 M的緩衝液時(參照圖5(a)的●及○),4小時後自野生型及變異體(A713L)分別生成33.0 g/L及31.6 g/L的丁二胺。另外,於使用低濃度的緩衝液(0.1 M)時(參照圖5(a)的◆及◇),7小時後野生型及變異體(A713L)分別生成20.2 g/L及20.7 g/L的丁二胺。確認到野生型及變異體(A713L)的丁二胺生產能力相似,且確認到使用高濃度緩衝液(0.37 M)有益於反應性。Figure 5(a) is the case where 51.5 g/L (0.39 M) ornithine acid is used as the substrate. In the case of converting ornithine to butanediamine, when 0.37 M buffer is used (refer to ● and ○ in Figure 5(a)), 33.0 are generated from the wild type and the mutant (A713L) after 4 hours. g/L and 31.6 g/L butanediamine. In addition, when using a low-concentration buffer (0.1 M) (refer to ◆ and ◇ in Figure 5(a)), 7 hours later, the wild-type and variant (A713L) produced 20.2 g/L and 20.7 g/L, respectively Butanediamine. It was confirmed that the butanediamine production capacity of the wild-type and variant (A713L) was similar, and it was confirmed that the use of a high-concentration buffer (0.37 M) is beneficial to the reactivity.

圖5(b)是將2.57 g/L(17.6 mM)的離胺酸用作基質的情形。於將離胺酸轉化成戊二胺的情形時,在使用0.37 M的緩衝液時(參照圖5(b)的●及○),4小時後自野生型及變異體(A713L)分別生成0.03 g/L及0.007 g/L的戊二胺。另外,於使用0.1 M的緩衝液時(參照圖5(b)的◆及◇),生成戊二胺的副反應增加,於7小時後自野生型及變異體(A713L)分別生成0.59 g/L及0.38 g/L的戊二胺作為副反應。藉此,確認到自變異體(A713L)生成戊二胺的副反應得到抑制,且確認到於使用高濃度的緩衝液(0.37 M)時,上述副反應抑制效果更突出。Figure 5(b) shows the case where 2.57 g/L (17.6 mM) lysine is used as the substrate. In the case of converting lysine into pentanediamine, when using 0.37 M buffer (refer to ● and ○ in Figure 5(b)), 0.03 is generated from the wild type and the mutant (A713L) after 4 hours. g/L and 0.007 g/L pentanediamine. In addition, when using 0.1 M buffer (refer to ◆ and ◇ in Figure 5(b)), the side reaction of pentane diamine increased, and after 7 hours, 0.59 g/m of the wild-type and variant (A713L) were generated respectively. L and 0.38 g/L pentanediamine were used as side reactions. As a result, it was confirmed that the side reaction of the self-mutant (A713L) to produce pentane diamine was suppressed, and it was confirmed that the above-mentioned side reaction suppression effect was more prominent when a high concentration buffer (0.37 M) was used.

實施例 6. 重組 ODC 基因於棒狀菌株中的表現量的比較測定 用以表現實施例1中所提及的來自四種微生物的鳥胺酸脫羧酶ODC_Lb、ODC_Sc、ODC_Ec、ODC_Ef的重組基因的製作方法如下。 Example 6. Comparative determination of the expression level of recombinant ODC genes in coryneform strains to express the recombinant genes of ornithine decarboxylase ODC_Lb, ODC_Sc, ODC_Ec, ODC_Ef from the four microorganisms mentioned in Example 1. The production method is as follows.

具體而言,利用雞源乳桿菌(ACCESSION no. P43099)、釀酒酵母(ACCESSION no. J02777.1)及大腸桿菌str. K-12 (ACCESSION no.BAA35349)遺傳體資訊以表1中明示的基因序列藉由PCR對鳥胺酸脫羧酶基因進行基因編碼區域擴增後,對PCR生成物處理限制酶而插入至質體。Specifically, the genetic information of Lactobacillus from chicken (ACCESSION no. P43099), Saccharomyces cerevisiae (ACCESSION no. J02777.1) and E. coli str. K-12 (ACCESSION no. BAA35349) are used to specify the genes in Table 1. After the sequence is amplified by the gene coding region of the ornithine decarboxylase gene by PCR, the PCR product is treated with restriction enzymes and inserted into the plastids.

[表1] 引子 引子序列 odc_Lb_F (SEQ ID NO:32)

Figure 02_image001
oclc_Lb_R (SEQ ID NO:33)
Figure 02_image003
odc_Sc_F (SEQ ID NO:34)
Figure 02_image005
cdc_Sc_R (SEQ ID NO:35)
Figure 02_image007
Odc_Ec_F (SEQ ID NO:36)
Figure 02_image009
Odc_Ec_R (SEQ ID NO:37)
Figure 02_image011
Odc_Ef_F (SEQ ID NO:38)
Figure 02_image013
Odc_Ef_R (SEQ ID NO:39)
Figure 02_image015
[Table 1] Introduction Primer sequence odc_Lb_F (SEQ ID NO: 32)
Figure 02_image001
oclc_Lb_R (SEQ ID NO: 33)
Figure 02_image003
odc_Sc_F (SEQ ID NO: 34)
Figure 02_image005
cdc_Sc_R (SEQ ID NO: 35)
Figure 02_image007
Odc_Ec_F (SEQ ID NO: 36)
Figure 02_image009
Odc_Ec_R (SEQ ID NO: 37)
Figure 02_image011
Odc_Ef_F (SEQ ID NO: 38)
Figure 02_image013
Odc_Ef_R (SEQ ID NO: 39)
Figure 02_image015

以可於蛋白質C-末端另外轉譯His-tag的方式製作重組的基因。將大腸桿菌DH5α用作用以操作DNA的宿主菌株,將大腸桿菌BL21(DE3)用作用以表現C-末端His6-tag ODC基因的宿主菌株。於含有50 μg/mL的康黴素的50mL LB培養基中在37℃下生長重組大腸桿菌BL21。於培養液於OD600 條件下達到0.8時,將0.2 mM IPTG添加至培養液。於18℃至30℃下誘導蛋白質表現後,收穫細胞。將細胞再懸浮至溶解緩衝液,進行超音波處理而破壞細胞。將所獲得的重組ODC於4℃下精製成Quiagen(Hilden,Germany)的Ni-NTA瓊脂糖樹脂。連同100 kDa的分子質量切斷(cut off)一併使用Centriplus YM-30(Millipore,Bedford,MA)獲得重組蛋白質。表現結果如圖6。The recombinant gene can be produced in a way that can additionally translate His-tag at the C-terminal of the protein. E. coli DH5α was used as a host strain for DNA manipulation, and E. coli BL21 (DE3) was used as a host strain for expressing the C-terminal His6-tag ODC gene. Recombinant Escherichia coli BL21 was grown in 50 mL of LB medium containing 50 μg/mL of kangmycin at 37°C. When the culture solution reached 0.8 under the OD 600 condition, 0.2 mM IPTG was added to the culture solution. After induction of protein expression at 18°C to 30°C, cells were harvested. The cells are resuspended in the lysis buffer and subjected to ultrasonic treatment to destroy the cells. The obtained recombinant ODC was refined into Quiagen (Hilden, Germany) Ni-NTA agarose resin at 4°C. Centriplus YM-30 (Millipore, Bedford, MA) was used together with a molecular mass cut off of 100 kDa to obtain recombinant protein. The performance results are shown in Figure 6.

若於十二烷基磺酸鈉聚丙烯醯胺凝膠電泳(Sodium Dodecyl Sulfonate Polyacrylamide Gel Electrophoresis,SDS-PAGE)凝膠(gel)上分析30℃表現誘導條件的結果,則可確認到重組ODC_Lb與ODC_Ec的表現量高於ODC_Sc、ODC_Ef。然而,於ODC_Ec的情形時,確認到中溫條件表現時可溶性蛋白質量明顯減少。進而,於進行37℃表現時,ODC_Ec的可溶性蛋白質量進一步減少。If the results of induction conditions at 30℃ are analyzed on the Sodium Dodecyl Sulfonate Polyacrylamide Gel Electrophoresis (SDS-PAGE) gel, it can be confirmed that the recombinant ODC_Lb and The performance of ODC_Ec is higher than ODC_Sc and ODC_Ef. However, in the case of ODC_Ec, it was confirmed that the soluble protein mass was significantly reduced when the temperature was expressed. Furthermore, when performing expression at 37°C, the soluble protein mass of ODC_Ec was further reduced.

於棒狀菌株中,表現ODC_Lb與ODC_Ec基因而對表現為可溶性蛋白質的量進行比較評估。於ODC_Lb基因及ODC_Ec基因的起始密碼子前導入CJ7啟動子(KCCM10617,韓國註冊專利第10-0620092號)。首先,為了獲得包括CJ7啟動子序列的基因,以谷胺酸棒狀桿菌ATCC13032的基因組DNA為模板執行利用表2中明示的引子對的PCR。PCR反應是反覆進行30次如下過程而實施:於95℃下改質30秒、於55℃下退火30秒及於72℃下伸長30秒。In coryneform strains, the ODC_Lb and ODC_Ec genes are expressed and the amount of soluble protein expressed as a comparative evaluation. The CJ7 promoter (KCCM10617, Korean Registered Patent No. 10-0620092) was introduced before the start codons of the ODC_Lb gene and ODC_Ec gene. First, in order to obtain a gene including the CJ7 promoter sequence, PCR using the primer pair specified in Table 2 was performed using the genomic DNA of Corynebacterium glutamicum ATCC13032 as a template. The PCR reaction was carried out by repeating the following process 30 times: modification at 95°C for 30 seconds, annealing at 55°C for 30 seconds, and elongation at 72°C for 30 seconds.

[表2] 引子 引子序列 Co-CJ7_5 (SEQ ID NO:40)

Figure 02_image017
Co-CJ7_3 (SEQ ID NO:41)
Figure 02_image019
[Table 2] Introduction Primer sequence Co-CJ7_5 (SEQ ID NO: 40)
Figure 02_image017
Co-CJ7_3 (SEQ ID NO: 41)
Figure 02_image019

於利用1.5%瓊脂糖凝膠進行電泳後,確認具有400鹼基對(bp)的尺寸的PCR核酸產物。利用PCR prep kit (GeneAll,首爾)對所獲得的PCR產物進行精製。將BamHI與XbaI放入至精製的PCR產物與pSCEC載體溶液樣品,藉由於37℃下反應4小時而進行限制酶處理,於利用1.5%瓊脂糖凝膠進行電泳後,切斷具有400bp的尺寸的PCR核酸產物條帶與載體尺寸的條帶,之後利用Gel prep kit (GeneAll,Seoul)獲得核酸片段。於利用T4連接酶(ligase)將精製的各1 mg的CJ7啟動子片段與載體連接後,對大腸桿菌DH5α菌株進行電致孔(electrophoration)。以2500 V施加電致孔。將回收的菌株塗抹至包括50 µg/L觀黴素(spectinomycin)的LB平板培養基而於37℃下培養1日後,篩選表現出耐性的菌株。於篩選18個菌株而以SEQ ID NO:9及SEQ ID NO:10進行菌落PCR後,可確認具有400bp尺寸的PCR產物。根據菌落PCR結果確認具有CJ7啟動子的pSCEC_cj7的製作。After electrophoresis using a 1.5% agarose gel, it was confirmed that the PCR nucleic acid product had a size of 400 base pairs (bp). Use PCR prep kit (GeneAll, Seoul) to refine the obtained PCR products. BamHI and XbaI were put into the purified PCR product and pSCEC vector solution sample, and subjected to restriction enzyme treatment due to the reaction at 37°C for 4 hours. After electrophoresis on 1.5% agarose gel, the 400bp size was cut PCR nucleic acid product band and vector size band, and then use Gel prep kit (GeneAll, Seoul) to obtain nucleic acid fragments. After ligating the purified CJ7 promoter fragments of 1 mg each with the vector using T4 ligase, electrophoration was performed on the E. coli DH5α strain. Electroporation was applied at 2500 V. The recovered strains were smeared on an LB plate medium containing 50 µg/L spectinomycin and cultured at 37°C for 1 day, and then strains showing resistance were selected. After screening 18 strains and performing colony PCR with SEQ ID NO: 9 and SEQ ID NO: 10, PCR products with a size of 400 bp can be confirmed. According to the colony PCR results, the production of pSCEC_cj7 with CJ7 promoter was confirmed.

基於所獲得的pSCEC_cj7載體而利用表3中所明示的引子來藉由PCR對2個基因ODC_Lb與ODC_Ec進行擴增。Based on the obtained pSCEC_cj7 vector and the primers shown in Table 3, the two genes ODC_Lb and ODC_Ec were amplified by PCR.

[表3] 引子 引子序列 Co-ODC_Lb_5 (SEQ ID NO:42)

Figure 02_image021
Co-ODC_Lb_3 (SEQ ID NO:43)
Figure 02_image023
Co-ODC_Ec_5 (SEQ ID NO:44)
Figure 02_image025
Co-ODC_Ec_3 (SEQ ID NO:45)
Figure 02_image027
[table 3] Introduction Primer sequence Co-ODC_Lb_5 (SEQ ID NO: 42)
Figure 02_image021
Co-ODC_Lb_3 (SEQ ID NO: 43)
Figure 02_image023
Co-ODC_Ec_5 (SEQ ID NO: 44)
Figure 02_image025
Co-ODC_Ec_3 (SEQ ID NO: 45)
Figure 02_image027

藉由限制酶XbaI與SalI對所獲得的上述PCR產物及pSCEC_cj7載體進行處理。對經限制酶處理的核酸進行凝膠預備而將ODC_Lb、ODC_Ec及pSCEC_cj7核酸片段連接,插入至大腸桿菌DH5α菌株。自確認到插入的篩選出的菌株分別獲得pSCEC_cj7_ODC_Lb及pSCEC_cj7_ODC_Ec,對生產丁二胺的棒狀桿菌屬微生物KCCM11240P分別以2500確V進行電致孔(electrophoration)。The obtained PCR product and pSCEC_cj7 vector were processed by restriction enzymes XbaI and SalI. The nucleic acid treated with restriction enzymes was gel-prepared, and the ODC_Lb, ODC_Ec, and pSCEC_cj7 nucleic acid fragments were ligated and inserted into E. coli DH5α strain. PSCEC_cj7_ODC_Lb and pSCEC_cj7_ODC_Ec were obtained from the selected strains whose insertion was confirmed, and electrophoration was performed on the Corynebacterium genus KCCM11240P, which produces butanediamine, at 2500 V, respectively.

於包括50 µg/L觀黴素(spectinomycin)的BHIS平板培養基(腦心浸液(Braine heart infusion)37 g/l,山梨醇91 g/l,瓊脂2%)塗抹上述菌株進行培養,藉此形成菌落。確認到篩選出的上述菌株可於包括50 µg/L觀黴素(spectinomycin)的CM培養基(葡萄糖(glucose)10 g/L,多聚蛋白腖(polypeptone)10 g/L,酵母萃(yeast extract)5 g/L,牛肉萃(beef extract)5 g/L,NaCl 2.5 g/L,尿素(Urea)2 g/L,pH6.8)進行振盪培養。於將所製作的2種谷胺酸棒狀桿菌變異株培養3 mL後,進行離心分離而獲得菌體。藉由超音波處理方法對所獲得的菌體進行細胞粉碎後,進行離心分離而獲得包括可溶性蛋白質的溶液。Spread the above strains on BHIS plate medium (Braine heart infusion 37 g/l, sorbitol 91 g/l, agar 2%) containing 50 µg/L spectinomycin to cultivate, thereby Form colonies. It has been confirmed that the selected strains can be used in CM medium (glucose 10 g/L, polypeptone 10 g/L, and yeast extract) containing 50 µg/L spectinomycin. 5 g/L, beef extract 5 g/L, NaCl 2.5 g/L, Urea 2 g/L, pH 6.8) for shaking culture. After culturing 3 mL of the produced two kinds of Corynebacterium glutamicum mutant strains, they were centrifuged to obtain bacterial cells. After pulverizing the cells of the obtained bacterial cells by an ultrasonic treatment method, they are centrifuged to obtain a solution containing soluble proteins.

利用Ni-NTA離心柱(Spin Columns)(Hilden,Germany)分別對包括His-tag的ODC_Lb、ODC_Ec蛋白質進行精製。利用Nano drop獲得而對蛋白質的濃度進行測定。基於測定值計算的重組蛋白質濃度分別為ODC_Lb:1.282g/L、ODC_Ec:0.039 g/L,確認到獲得棒狀菌株中ODC_Lb較ODC_Ec為30倍以上的可溶性蛋白質。The ODC_Lb and ODC_Ec proteins including His-tag were purified by Ni-NTA Spin Columns (Hilden, Germany). Use Nano drop to obtain and measure the protein concentration. The recombinant protein concentrations calculated based on the measured values were ODC_Lb: 1.282 g/L and ODC_Ec: 0.039 g/L. It was confirmed that ODC_Lb in the coryneform strain was 30 times more soluble protein than ODC_Ec.

可確認到於在中溫條件下將大腸桿菌與棒狀菌株用作宿主而表現ODC_Lb時,因高表現量與正常蛋白質皺褶而可生產可溶性較高的蛋白質。 It can be confirmed that when E. coli and coryneform strains are used as hosts to express ODC_Lb under moderate temperature conditions, a highly soluble protein can be produced due to high expression levels and normal protein wrinkles.

實施例 7. 導入有變異體鳥胺酸脫羧酶的棒狀丁二胺生產菌株的製備及丁二胺生產能力的測定 為了研究本申請案的鳥胺酸脫羧酶變異體對丁二胺生產產生的影響,製作將上述鳥胺酸脫羧酶變異體導入至丁二胺生產能力提高的棒狀桿菌屬微生物的菌株。 Example 7. Preparation of rod-shaped butanediamine producing strain with variant ornithine decarboxylase introduced and measurement of butanediamine production capacity In order to study the production and production of butanediamine by the ornithine decarboxylase variant of this application As a result of the influence of the above-mentioned ornithine decarboxylase variants, strains of microorganisms of the genus Corynebacterium with improved butanediamine production capacity were produced.

具體而言,作為上述丁二胺生產能力提高的棒狀桿菌屬微生物,使用專利申請案(韓國公開專利第2013-0082478號)中所揭示的具有丁二胺生產能力的棒狀桿菌屬微生物(KCCM11240P)。具有丁二胺生產能力的上述棒狀桿菌屬微生物(KCCM11240P)為於由谷胺酸棒狀桿菌ATCC13032製備的微生物(ATCC 13032 ΔargF ΔNCgl1221 P(CJ7)-argCJBD bioAD::P(CJ7)-speC(Ec): KCCM11138P(韓國公開專利第2012-0064046號))內缺失NCgl1469的微生物。Specifically, as the microorganism of the genus Corynebacterium having the above-mentioned butanediamine-producing ability, the microorganism of the genus Corynebacterium having the ability to produce butanediamine disclosed in the patent application (Korea Patent Publication No. 2013-0082478) is used ( KCCM11240P). The above-mentioned Corynebacterium microorganism (KCCM11240P) with the ability to produce butanediamine is a microorganism prepared from Corynebacterium glutamicum ATCC13032 (ATCC 13032 ΔargF ΔNCgl1221 P(CJ7)-argCJBD bioAD::P(CJ7)-speC( Ec): KCCM11138P (Korean Published Patent No. 2012-0064046)) a microorganism lacking NCgl1469.

製作用以於上述丁二胺生產微生物內以來自上述乳桿菌的鳥胺酸脫羧酶變異體取代鳥胺酸脫羧酶的載體。更具體而言,利用下述表4中揭示的ODC_Lb_start (EcoRV)_5、ODC_Lb_stop (MfeI)_3引子對上述實施例1及實施例3中製作的來自乳桿菌的鳥胺酸脫羧酶變異體的DNA進行擴增。具體而言,於所製作的上述pET24ma載體插入野生型及變異體(E698D、A713L)的乳桿菌鳥胺酸脫羧酶而分別將其作為模板,使用下述表4中揭示的兩個引子L-odc_start (EcoRV)_5、L-odc_stop (MfeI)_3執行PCR。A vector for replacing ornithine decarboxylase with a variant of ornithine decarboxylase derived from the above-mentioned Lactobacillus in the above-mentioned butanediamine producing microorganism is prepared. More specifically, the ODC_Lb_start (EcoRV)_5 and ODC_Lb_stop (MfeI)_3 primers disclosed in Table 4 below were used to compare the DNA of the Lactobacillus-derived ornithine decarboxylase variant prepared in Example 1 and Example 3. Perform amplification. Specifically, wild-type and variant (E698D, A713L) Lactobacillus ornithine decarboxylase were inserted into the prepared pET24ma vector and used as templates respectively, and the two primers L- disclosed in Table 4 below were used. odc_start (EcoRV)_5, L-odc_stop (MfeI)_3 execute PCR.

[表4] 引子 引子序列 ODC_Lb_start (EcoRV)_5 (SEQ ID NO:46)

Figure 02_image029
ODC_Lb_stop (Mfel)_3 (SEQ ID NO:47)
Figure 02_image031
[Table 4] Introduction Primer sequence ODC_Lb_start (EcoRV)_5 (SEQ ID NO: 46)
Figure 02_image029
ODC_Lb_stop (Mfel)_3 (SEQ ID NO: 47)
Figure 02_image031

利用EcoRV與MfeI限制酶對藉由PCR擴增獲得的基因片段進行處理(37℃、3小時),將來自乳桿菌的野生型及變異體(E698D、A713L)鳥胺酸脫羧酶的基因片段插入至利用與韓國公開專利第2012-0064046號中揭示的方法相同的方法製作的pDZ-bioAD-P(CJ7)載體。於上述方法中,使用EcoRV與MfeI限制酶。藉由序列分析對藉由上述方法製作的染色體插入用重組載體(pDZ-ODC_Lb、pDZ-ODC_Lb_E698D、pDZ-ODC_Lb_A713L)進行確認。Treat the gene fragments amplified by PCR with EcoRV and MfeI restriction enzymes (37°C, 3 hours), and insert the gene fragments of wild-type and variant (E698D, A713L) ornithine decarboxylase from Lactobacillus To the pDZ-bioAD-P (CJ7) vector produced by the same method as that disclosed in Korean Patent Publication No. 2012-0064046. In the above method, EcoRV and MfeI restriction enzymes are used. The recombinant vectors for chromosome insertion (pDZ-ODC_Lb, pDZ-ODC_Lb_E698D, pDZ-ODC_Lb_A713L) prepared by the above method were confirmed by sequence analysis.

為了獲得於染色體內插入有來自乳桿菌的野生型及變異體鳥胺酸脫羧酶的棒狀菌株,利用電穿孔法將以上所製作的pDZ-ODC_Lb、pDZ-ODC_Lb_E698D、pDZ-ODC_Lb_A713L重組載體分別轉染至KCCM11240P菌株後,塗抹至BHIS平板培養基(腦心浸液37 g/l,山梨醇91 g/l,瓊脂(agar)2%,1 L基準+康黴素(kanamycin)25 ug/ml)。In order to obtain a coryneform strain with wild-type and variant ornithine decarboxylase from Lactobacillus inserted in the chromosome, the pDZ-ODC_Lb, pDZ-ODC_Lb_E698D, and pDZ-ODC_Lb_A713L recombinant vectors prepared above were respectively transformed by electroporation. After staining KCCM11240P strain, apply to BHIS plate medium (brain heart infusion 37 g/l, sorbitol 91 g/l, agar (agar) 2%, 1 L standard + kanamycin (kanamycin) 25 ug/ml) .

藉由是否在包括X-gal(5-溴-4-氯-3-吲哚基-β-D-半乳糖苷)的固體培養基中顯示出藍色來判別載體成功插入至染色體內。於營養培養基中振盪培養(30℃,8小時)插入有一次染色體的菌株後,分別進行連續稀釋而塗抹於包括X-gal的固體培養基。大部分菌落呈藍色,相反地,能夠以低比率篩選白色的菌落,篩選出的菌落可藉由二次交叉(cross over)獲得於染色體導入有最終乳桿菌鳥胺酸脫羧酶變異體的菌株。最後,藉由變異體的序列分析確認菌株。將確認到的菌株命名為KCCM11240P::ODC_Lb、KCCM11240P::ODC_Lb_E698D、KCCM11240P::ODC_Lb_A713L。The successful insertion of the vector into the chromosome is determined by whether it shows blue in a solid medium containing X-gal (5-bromo-4-chloro-3-indolyl-β-D-galactoside). After shaking culture (30°C, 8 hours) in a nutrient medium, strains with a chromosome inserted once were serially diluted and smeared on a solid medium containing X-gal. Most of the colonies are blue. Conversely, white colonies can be screened at a low rate. The selected colonies can be obtained by cross over to the strain with the final Lactobacillus ornithine decarboxylase variant introduced into the chromosome . Finally, the strain was confirmed by sequence analysis of the variant. The confirmed strains were named KCCM11240P::ODC_Lb, KCCM11240P::ODC_Lb_E698D, KCCM11240P::ODC_Lb_A713L.

為了確認導入來自乳桿菌的野生型及變異體鳥胺酸脫羧酶對丁二胺生產菌株的丁二胺生產能力產生的影響,對丁二胺生產能力進行評估。In order to confirm the effect of the introduction of wild-type and variant ornithine decarboxylase from Lactobacillus on the butanediamine production capacity of the butanediamine producing strain, the butanediamine production capacity was evaluated.

具體而言,將以上所製作的菌株於包括1 mM精胺酸的CM平板培養基(葡萄糖1%,多聚蛋白腖1%,酵母萃取物0.5%,牛肉萃0.5%,NaCl 0.25%,尿素0.2%,50%NaOH 100 ul,瓊脂2%,pH6.8,1 L基準)中以30℃培養16小時後,將約一種鉑接種至具有下述表5的組成的25 ml效價培養基,之後將其於30℃下以200 rpm振盪培養24小時。於醱酵時在培養基添加1 mM精胺酸來培養所製作的所有菌株。Specifically, the above-prepared strain was placed on a CM plate medium containing 1 mM arginine (glucose 1%, polyprotein 1%, yeast extract 0.5%, beef extract 0.5%, NaCl 0.25%, urea 0.2% , 50% NaOH 100 ul, 2% agar, pH 6.8, 1 L standard) after culturing at 30°C for 16 hours, inoculate about one type of platinum into 25 ml titer medium having the composition of Table 5 below, and then It was cultured with shaking at 200 rpm at 30°C for 24 hours. During fermentation, 1 mM arginine was added to the medium to cultivate all the strains produced.

[表5] 組成成分 濃度/含量(1 L基準) 葡萄糖 8% 大豆蛋白質 0.25% 玉米漿固形物 0.5% (NH4 )2 SO4 4% 要素 0.15% KH2 PO4 0.1% MgSO4 -7H2 O 0.05% 生物素 100 ug 鹽酸硫胺 3000 ug 泛酸鈣 3000 ug 菸醯胺 3000 ug CaCO3 5% [table 5] Composition Concentration/content (1 L standard) glucose 8% Soy protein 0.25% Corn steep liquor solids 0.5% (NH 4 ) 2 SO 4 4% Element 0.15% KH 2 PO 4 0.1% MgSO 4 -7H 2 O 0.05% Biotin 100 ug Thiamine Hydrochloride 3000 ug thbrthdrexvbdr 3000 ug Nicotinamide 3000 ug CaCO 3 5%

其結果,如表6所示,於培養12小時後,在導入來自乳桿菌的變異體(A713L)鳥胺酸脫羧酶的菌株中,與具有大腸桿菌鳥胺酸脫羧酶的菌株(KCCM11240P)相比,丁二胺產量增加約115%P。另外,於導入A713L鳥胺酸脫羧酶的菌株中,表現出較具有來自乳桿菌的野生型鳥胺酸脫羧酶的菌株(KCCM11240P::ODC_Lb)增加約40%P的狀態。As a result, as shown in Table 6, after 12 hours of culture, the strain introduced with the Lactobacillus-derived variant (A713L) ornithine decarboxylase was similar to the strain with E. coli ornithine decarboxylase (KCCM11240P). Compared with, butanediamine production increased by about 115%P. In addition, the strains introduced with A713L ornithine decarboxylase showed an increase of approximately 40% P compared to the strain with wild-type ornithine decarboxylase derived from Lactobacillus (KCCM11240P::ODC_Lb).

另外,可知與KCCM11240P相比,導入有A713L鳥胺酸脫羧酶的菌株(KCCM11240P::ODC_Lb_A713L)因生產丁二胺時的副反應產生的戊二胺減少約48%P,且根據殘留於培養液內的葡萄糖濃度推測,相同時間內的糖消耗量增加,生產性一併增加。In addition, it can be seen that compared with KCCM11240P, the strain with A713L ornithine decarboxylase (KCCM11240P::ODC_Lb_A713L) produced pentane diamine due to side reactions during the production of butanediamine reduced by about 48% P, and it was found that the amount remained in the culture medium. It is estimated that the sugar consumption in the same time increases, and the productivity also increases.

[表6] 菌株 12 hrs 插入(g/L) 摺疊(%) Cad (ppm) 摺疊(%) 殘留葡萄糖 (g/L) KCCM11240P 1.3 100 39.427 100 41.7 KCCM11240P::ODC_Lb 2.0 154 26.196 66 37.3 KCCM11240P::ODC_Lb_A713L 2.8 215 20.367 52 29.0 KCCM11240P::ODC_Lb_E698D 2.7 208 23.243 59 29.8 [Table 6] Strain 12 hrs Insert (g/L) fold(%) Cad (ppm) fold(%) Residual glucose (g/L) KCCM11240P 1.3 100 39.427 100 41.7 KCCM11240P::ODC_Lb 2.0 154 26.196 66 37.3 KCCM11240P::ODC_Lb_A713L 2.8 215 20.367 52 29.0 KCCM11240P::ODC_Lb_E698D 2.7 208 23.243 59 29.8

如上所述的結果表明,因導入來自乳桿菌的變異體鳥胺酸脫羧酶而不僅可自丁二胺生產菌株生產相對糖消耗而高於現有的濃度的丁二胺,而且具有減少戊二胺及提高生產性的效果。The above results indicate that the introduction of a variant ornithine decarboxylase from Lactobacillus can not only produce butanediamine whose relative sugar consumption is higher than the existing concentration from butanediamine producing strains, but also reduce pentamethylenediamine. And the effect of improving productivity.

實施例 8. 乳桿菌鳥胺酸脫羧酶的第 713 個胺基酸殘基的飽和變異影響的預測 於所選擇的變異中,針對乳桿菌鳥胺酸脫羧酶的第713個丙胺酸由白胺酸取代的功能性殘基(A713L)以除丙胺酸及白胺酸以外的其他胺基酸取代,之後導入至丁二胺生產菌株KCCM11240P而研究對丁二胺生產造成的影響。 Example 8. Prediction of the influence of the saturation variation of the 713th amino acid residue of Lactobacillus ornithine decarboxylase In the selected variation, the 713th alanine of Lactobacillus ornithine decarboxylase is determined by leucine The acid-substituted functional residues (A713L) were replaced with amino acids other than alanine and leucine, and then introduced into the butanediamine production strain KCCM11240P to study the impact on butanediamine production.

具體而言,製作如下的變異菌株:代替丁二胺生產能力提高的棒狀桿菌屬微生物(KCCM11240P)的染色體內的來自大腸桿菌的野生型鳥胺酸脫羧酶取代於SEQ ID NO:1的胺基酸序列中以包括疏水性胺基酸的其他胺基酸取代自N-末端起第713個胺基酸的形態的變異體。更具體而言,為了分別製作以疏水性胺基酸之一的纈胺酸、鹼性胺基酸之一的精胺酸、酸性胺基酸之一的天冬胺酸、中性胺基酸之一的麩醯胺酸、芳香族性胺基酸之一的色胺酸取代的載體,以實施例7中製作的pDZ-ODC_Lb載體為模板而使用上述表4與下述表7中揭示的引子來執行PCR。以欲引發變異的部位為中心分別對前側部分(5')與後側部分(3')進行一次PCR,之後執行使兩個PCR片段吻合的二次PCR。例如,於將第713個胺基酸自丙胺酸取代為纈胺酸的變異(A713V)的情形時,前側部分使用ODC_Lb_start (EcoRV)_5與ODC_Lb_A713V_3引子而藉由PCR進行擴增,後側部分使用ODC_Lb_A713V_5與ODC_Lb_stop (MfeI)_3引子而藉由PCR進行擴增。將藉由一次PCR獲得的兩個PCR片段用作二次PCR的模板,使用ODC_Lb_start(EcoRV)_5與ODC_Lb_stop(MfeI)_3引子進行PCR。最終獲得的乳桿菌鳥胺酸脫羧酶變異體A713V基因片段藉由與實施例7相同的方法插入至pDZ-bioAD-P(CJ7)載體。除此之外的剩餘變異體A713R、A713D、A713W、A713Q亦使用表7中揭示的引子而藉由與上述相同的方法進行PCR來插入至pDZ-bioAD-P(CJ7)載體。藉由序列分析對所製作的染色體插入用重組載體(pDZ-ODC_Lb_A713V、pDZ-ODC_Lb_A713R、pDZ-ODC_Lb_A713D、pDZ-ODC_Lb_A713W、pDZ-ODC_Lb_A713Q)進行確認。Specifically, the following mutant strain was produced: instead of the wild-type ornithine decarboxylase derived from E. coli in the chromosome of a microorganism of the genus Corynebacterium (KCCM11240P) with improved butanediamine production capacity, the amine of SEQ ID NO:1 The base acid sequence is a variant in which the 713th amino acid from the N-terminus is substituted with another amino acid including a hydrophobic amino acid. More specifically, in order to separately produce valine, which is one of hydrophobic amino acids, arginine, which is one of basic amino acids, and aspartic acid, which is one of acidic amino acids, and neutral amino acids. One of the glutamic acid and the tryptophan-substituted vector of one of the aromatic amino acids, using the pDZ-ODC_Lb vector prepared in Example 7 as a template, using the above-mentioned Table 4 and the following Table 7 Primer to perform PCR. Perform a PCR on the front part (5') and the back part (3') centering on the site to be changed, and then perform a second PCR to match the two PCR fragments. For example, in the case of a variant (A713V) where the 713th amino acid is substituted from alanine to valine, the front part uses ODC_Lb_start (EcoRV)_5 and ODC_Lb_A713V_3 primers for amplification by PCR, and the back part uses ODC_Lb_A713V_5 and ODC_Lb_stop (MfeI)_3 primers are amplified by PCR. The two PCR fragments obtained by one PCR were used as templates for the second PCR, and PCR was performed using ODC_Lb_start (EcoRV)_5 and ODC_Lb_stop (MfeI)_3 primers. The finally obtained Lactobacillus ornithine decarboxylase variant A713V gene fragment was inserted into the pDZ-bioAD-P (CJ7) vector by the same method as in Example 7. The remaining variants A713R, A713D, A713W, and A713Q were also inserted into the pDZ-bioAD-P(CJ7) vector by PCR using the same method as above using the primers disclosed in Table 7. The prepared recombinant vectors for chromosome insertion (pDZ-ODC_Lb_A713V, pDZ-ODC_Lb_A713R, pDZ-ODC_Lb_A713D, pDZ-ODC_Lb_A713W, pDZ-ODC_Lb_A713Q) were confirmed by sequence analysis.

[表7] 引子 引子序列 ODC_Lb_A713V_3 (SEQ ID NO:48)

Figure 02_image033
ODC_Lb_A713V_5 (SEQ ID NO:49)
Figure 02_image035
ODC_Lb_A713R_3 (SEQ ID NO:50)
Figure 02_image037
ODC_Lb_A713R_5 (SEQ ID NO:51)
Figure 02_image039
ODC_Lb_A713D_3 (SEQ ID NO:52)
Figure 02_image041
ODC_Lb_A713D_5 (SEQ ID NO:53)
Figure 02_image043
ODC_Lb_A713Q_3 (SEQ ID NO:54)
Figure 02_image045
ODC_Lb_A713Q_5 (SEQ ID NO:55)
Figure 02_image047
ODC_Lb_A713W_3 (SEQ ID NO:56)
Figure 02_image049
ODC_Lb_A713W_5 (SEQ ID NO:57)
Figure 02_image051
[Table 7] Introduction Primer sequence ODC_Lb_A713V_3 (SEQ ID NO: 48)
Figure 02_image033
ODC_Lb_A713V_5 (SEQ ID NO: 49)
Figure 02_image035
ODC_Lb_A713R_3 (SEQ ID NO: 50)
Figure 02_image037
ODC_Lb_A713R_5 (SEQ ID NO: 51)
Figure 02_image039
ODC_Lb_A713D_3 (SEQ ID NO: 52)
Figure 02_image041
ODC_Lb_A713D_5 (SEQ ID NO: 53)
Figure 02_image043
ODC_Lb_A713Q_3 (SEQ ID NO: 54)
Figure 02_image045
ODC_Lb_A713Q_5 (SEQ ID NO: 55)
Figure 02_image047
ODC_Lb_A713W_3 (SEQ ID NO: 56)
Figure 02_image049
ODC_Lb_A713W_5 (SEQ ID NO: 57)
Figure 02_image051

為了獲得於染色體內插入有乳桿菌鳥胺酸脫羧酶的第713個丙胺酸由包括疏水性胺基酸的其他胺基酸取代的形態的變異體的菌株,可藉由如實施例7的方法將以上所製作的pDZ-ODC_Lb_A713V、pDZ-ODC_Lb_A713R、pDZ-ODC_Lb_A713D、pDZ-ODC_Lb_A713W、pDZ-ODC_Lb_A713Q重組載體分別轉染至KCCM11240P菌株並進行篩選而最終獲得於染色體導入有最終乳桿菌鳥胺酸脫羧酶變異體的菌株。最後,藉由變異體的序列分析而確認菌株。將確認的菌株命名為KCCM11240P::ODC_Lb_A713V、KCCM11240P::ODC_Lb_A713R、KCCM11240P::ODC_Lb_A713D、KCCM11240P::ODC_Lb_A713Q、KCCM11240P::ODC_Lb_A713W。In order to obtain a strain in which the 713th alanine of Lactobacillus ornithine decarboxylase inserted into the chromosome is substituted by other amino acids including hydrophobic amino acids, the method described in Example 7 can be used The pDZ-ODC_Lb_A713V, pDZ-ODC_Lb_A713R, pDZ-ODC_Lb_A713D, pDZ-ODC_Lb_A713W, and pDZ-ODC_Lb_A713Q recombinant vectors prepared above were respectively transfected into the KCCM11240P strain, and the final lactobacillus decarboxylase was introduced into the chromosome KCCM11240P strain. Variant strains. Finally, the strain was confirmed by sequence analysis of the variant. The confirmed strains were named KCCM11240P::ODC_Lb_A713V, KCCM11240P::ODC_Lb_A713R, KCCM11240P::ODC_Lb_A713D, KCCM11240P::ODC_Lb_A713Q, KCCM11240P::ODC_Lb_A713W.

為了確認導入乳桿菌鳥胺酸脫羧酶的第713個丙胺酸由包括疏水性胺基酸的其他胺基酸取代的形態的變異體對丁二胺生產菌株的丁二胺生產能力產生的影響,藉由如上述實施例7的方法對丁二胺生產能力進行評估。In order to confirm the effect of a variant of the form in which the 713th alanine acid introduced into Lactobacillus ornithine decarboxylase is replaced by other amino acids including hydrophobic amino acids on the butanediamine production capacity of the butanediamine producing strain, The production capacity of butanediamine was evaluated by the method as in Example 7 above.

[表8] 菌株 12 hrs 插入(g/L) 摺疊(%) Cad (ppm) 摺疊(%) 殘留葡萄糖 (g/L) KCCM11240P 1.3 100 39.024 100 40.9 KCCM11240P::ODC_Lb 2.0 154 27.283 70 37.6 KCCM11240P::ODC_Lb_A713L 2.8 215 20.069 51 29.8 KCCM11240P::ODC_Lb_A713V 2.2 169 24.123 62 31.6 KCCM11240P::ODC_Lb_A713R 2.5 192 22.961 59 25.9 KCCM11240P::ODC_Lb_A713D 2.3 177 23.615 61 33.4 KCCM11240P::ODC_Lb_A713Q 2.6 200 21.845 56 27.8 KCCM11240P::ODC_Lb_A713W 2.1 162 26.074 67 30.0 [Table 8] Strain 12 hrs Insert (g/L) fold(%) Cad (ppm) fold(%) Residual glucose (g/L) KCCM11240P 1.3 100 39.024 100 40.9 KCCM11240P::ODC_Lb 2.0 154 27.283 70 37.6 KCCM11240P::ODC_Lb_A713L 2.8 215 20.069 51 29.8 KCCM11240P::ODC_Lb_A713V 2.2 169 24.123 62 31.6 KCCM11240P::ODC_Lb_A713R 2.5 192 22.961 59 25.9 KCCM11240P::ODC_Lb_A713D 2.3 177 23.615 61 33.4 KCCM11240P::ODC_Lb_A713Q 2.6 200 21.845 56 27.8 KCCM11240P::ODC_Lb_A713W 2.1 162 26.074 67 30.0

其結果,如表8所示,導入有以包括疏水性的其他胺基酸取代的形態的乳桿菌鳥胺酸脫羧酶變異體的菌株的丁二胺產量亦較培養12小時後具有來自大腸桿菌的野生型鳥胺酸脫羧酶的菌株(KCCM11240P)平均增加約86%P。另外,表現出較具有來自乳桿菌的野生型鳥胺酸脫羧酶的菌株平均增加約21%P的狀態。As a result, as shown in Table 8, the strain introduced with a variant of Lactobacillus ornithine decarboxylase in the form of substitution with other hydrophobic amino acids also had a higher yield of butanediamine from Escherichia coli than after 12 hours of cultivation. The wild-type ornithine decarboxylase strain (KCCM11240P) increased by an average of about 86% P. In addition, it showed an average increase of about 21% P compared to the strain with wild-type ornithine decarboxylase derived from Lactobacillus.

另外,可知因丁二胺生產時的副反應而戊二胺生產減少約41%P,並且根據殘留於培養液內的葡萄糖濃度推算,相同時間內的糖消耗量增加,生產性一併增加。In addition, it can be seen that the production of pentamethylenediamine was reduced by about 41%P due to the side reaction during the production of butanediamine, and it was estimated from the concentration of glucose remaining in the culture solution that the sugar consumption in the same time increased, and the productivity also increased.

如上所述的結果表示,由於除乳桿菌鳥胺酸脫羧酶的第713個丙胺酸被白胺酸取代的變異體以外,被其他疏水性胺基酸中之一的纈胺酸、鹼性胺基酸中之一的精胺酸、酸性胺基酸中之一的天冬胺酸、中性胺基酸中之一的麩醯胺酸、芳香族性胺基酸中之一的色胺酸取代,因此,不僅可生產相對於丁二胺生產菌株中的糖消耗高於現有的濃度的丁二胺,而且具有減少戊二胺及提高生產性的效果。The above results show that, in addition to the 713th alanine of the Lactobacillus ornithine decarboxylase, which is replaced by leucine, it is replaced by valine and basic amine, which is one of the other hydrophobic amino acids. Arginine, one of the base acids, aspartic acid, one of the acidic amino acids, glutamic acid, one of the neutral amino acids, tryptophan, one of the aromatic amino acids Substitution, therefore, not only can produce butanediamine with a higher concentration than the existing concentration of sugar consumption in the butanediamine production strain, but also has the effects of reducing pentamethylenediamine and improving productivity.

根據以上說明,本申請案所屬的技術領域內的業者應可理解,本申請案可不變更其技術思想或必要特徵而以其他具體的形態實施。與此相關,應理解,以上所記述的實施例於所有方面均為例示,並無限制性含義。本申請案的範圍應解釋為根據下文敍述的申請專利範圍的含義、範圍及其等效概念導出的所有變更或變形的形態包括於本申請案的範圍,而並非上述詳細說明。Based on the above description, those in the technical field to which this application belongs should understand that this application can be implemented in other specific forms without changing its technical ideas or necessary features. In connection with this, it should be understood that the embodiments described above are illustrative in all aspects and have no restrictive meaning. The scope of this application should be interpreted as that all changes or deformations derived from the meaning, scope and equivalent concepts of the scope of patent application described below are included in the scope of this application, rather than the above detailed description.

no

圖1是表示於本申請案中以鳥胺酸為基質而利用鳥胺酸脫羧酶的丁二胺合成的示意圖。另外,表示作為需抑制的鳥胺酸脫羧酶的副反應的戊二胺合成路徑。 圖2是確認各種來源的鳥胺酸脫羧酶活性者,表示將鳥胺酸用作基質時的反應性及將離胺酸用作基質時的反應性(副反應)的相對活性度。ODC_Lb來自雞源乳桿菌(誘導型(inducible)),ODC_Sc來自釀酒酵母(誘導型),ODC_Ec來自大腸桿菌(組成型(constitutive)),ODC_Ef來自大腸桿菌(誘導型)。 圖3是表示利用來自精製的乳桿菌的野生型鳥胺酸脫羧酶及如下變異體分別對(a)鳥胺酸比活度與(b)離胺酸比活度進行定量後進行比較的圖:野生型鳥胺酸脫羧酶的第696個丙胺酸由麩胺酸取代(A696E);野生型鳥胺酸脫羧酶的第702個纈胺酸由甘胺酸取代(V702G);野生型鳥胺酸脫羧酶的第713個丙胺酸由白胺酸取代(A713L);野生型鳥胺酸脫羧酶的第696個丙胺酸與第713個丙胺酸由麩胺酸與白胺酸取代(A696E/A713L);野生型鳥胺酸脫羧酶的第702個纈胺酸與第713個丙胺酸由甘胺酸與白胺酸取代(V702G/A713L);野生型鳥胺酸脫羧酶的第696個丙胺酸、第702個纈胺酸及第713個丙胺酸由麩胺酸、甘胺酸及白胺酸取代(A696E/V702G/A713L);野生型鳥胺酸脫羧酶的第698個麩胺酸由天冬胺酸取代(E698D);野生型鳥胺酸脫羧酶的第698個麩胺酸與第713個丙胺酸由天冬胺酸與白胺酸取代(E698D/A713L)。 圖4是利用來自精製的乳桿菌的野生型鳥胺酸脫羧酶及如下變異體對離胺酸與鳥胺酸的動力學係數進行比較的圖:野生型鳥胺酸脫羧酶的第698個麩胺酸由天冬胺酸取代(E698D);野生型去羧酶的第713個丙胺酸由白胺酸取代(A713L);野生型鳥胺酸脫羧酶的第698個麩胺酸與第713個丙胺酸由天冬胺酸與白胺酸取代(E698D/A713L)。 圖5是對各種條件下的生物轉化反應進行比較的圖。(a)是以鳥胺酸基質定量丁二胺的合成,使來自精製的乳桿菌的野生型鳥胺酸脫羧酶於0.37 M濃度緩衝液中反應時(參照●)、使野生型鳥胺酸脫羧酶的第713個丙胺酸由白胺酸取代的變異體於0.37 M濃度緩衝液中反應時(參照○)、使野生型鳥胺酸脫羧酶於0.1 M濃度緩衝液中反應時(參照◆)、使野生型去羧酶的第713個丙胺酸由白胺酸取代的變異體於0.1 M濃度緩衝液中反應時(參照◇)的圖。(b)是以離胺酸為基質定量戊二胺合成,使來自精製的乳桿菌的野生型鳥胺酸脫羧酶於0.37 M濃度緩衝液中反應時(參照●)、使野生型鳥胺酸脫羧酶的第713個丙胺酸由白胺酸取代的變異體於0.37 M濃度緩衝液中反應時(參照○)、使野生型鳥胺酸脫羧酶於0.1 M濃度緩衝液中反應時(參照◆)、使野生型鳥胺酸脫羧酶的第713個丙胺酸由白胺酸取代的變異體於0.1 M濃度緩衝液中反應時(參照◇)的圖。 圖6是表示來自四種菌株的重組鳥胺酸脫羧酶基因的表現量。ODC_e.coli_SpeC來自大腸桿菌(組成型),ODC_e.coli_SpeF來自大腸桿菌(誘導型),ODC_乳桿菌來自雞源乳桿菌(誘導型),ODC_釀酒酵母來自釀酒酵母(誘導型)。Fig. 1 is a schematic diagram showing the synthesis of butanediamine using ornithine as a substrate and ornithine decarboxylase in this application. In addition, it shows a pentanediamine synthesis route which is a side reaction of ornithine decarboxylase to be inhibited. Figure 2 shows the activity of ornithine decarboxylase from various sources, showing the relative activity of the reactivity when ornithine is used as a substrate and the reactivity (side reaction) when lysine is used as the substrate. ODC_Lb is from Lactobacillus chicken (inducible), ODC_Sc is from Saccharomyces cerevisiae (inducible), ODC_Ec is from Escherichia coli (constitutive), and ODC_Ef is from Escherichia coli (inducible). Figure 3 is a graph showing the comparison of (a) ornithine specific activity and (b) lysine specific activity quantified using wild-type ornithine decarboxylase derived from purified Lactobacillus and the following variants respectively :The 696th alanine of the wild-type ornithine decarboxylase is replaced by glutamine (A696E); the 702nd valine of the wild-type ornithine decarboxylase is replaced by glycine (V702G); the wild-type ornithine The 713th alanine of the acid decarboxylase was replaced by leucine (A713L); the 696th alanine and the 713th alanine of the wild-type ornithine decarboxylase were replaced by glutamine and leucine (A696E/A713L) ); the 702nd valine and 713th alanine of wild-type ornithine decarboxylase are replaced by glycine and leucine (V702G/A713L); the 696th alanine of wild-type ornithine decarboxylase , The 702nd valine and the 713th alanine were replaced by glutamine, glycine and leucine (A696E/V702G/A713L); the 698th glutamine of the wild-type ornithine decarboxylase Partic acid substitution (E698D); the 698th glutamine and 713th alanine of wild-type ornithine decarboxylase are replaced by aspartic acid and leucine (E698D/A713L). Figure 4 is a graph comparing the kinetic coefficients of lysine and ornithine using wild-type ornithine decarboxylase from refined Lactobacillus and the following variants: the 698th bran of wild-type ornithine decarboxylase The amino acid was replaced by aspartic acid (E698D); the 713th alanine of the wild-type decarboxylase was replaced by leucine (A713L); the 698th glutamine and the 713th of the wild-type ornithine decarboxylase Alanine is replaced by aspartic acid and leucine (E698D/A713L). Figure 5 is a graph comparing biotransformation reactions under various conditions. (A) The synthesis of butanediamine is quantitatively based on ornithine acid matrix, and wild-type ornithine decarboxylase from purified Lactobacillus is reacted in a 0.37 M concentration buffer (refer to ●). When the 713th variant of decarboxylase in which alanine is replaced by leucine is reacted in 0.37 M buffer (refer to ○), when wild-type ornithine decarboxylase is reacted in 0.1 M buffer (refer to ◆ ), when the wild-type decarboxylase variant of the 713th alanine replaced by leucine is reacted in a 0.1 M concentration buffer (refer to ◇). (B) When lysine is used as a substrate to quantitatively synthesize pentane diamine, and when wild-type ornithine decarboxylase from purified Lactobacillus is reacted in a 0.37 M concentration buffer (refer to ●), make wild-type ornithine When the 713th variant of decarboxylase in which alanine is replaced by leucine is reacted in 0.37 M buffer (refer to ○), when wild-type ornithine decarboxylase is reacted in 0.1 M buffer (refer to ◆ ). When the wild-type ornithine decarboxylase's 713th variant of alanine is replaced by leucine is reacted in a 0.1 M concentration buffer (refer to ◇). Figure 6 shows the expression levels of recombinant ornithine decarboxylase genes from four strains. ODC_e.coli_SpeC is from Escherichia coli (constitutive), ODC_e.coli_SpeF is from Escherichia coli (inducible), ODC_ Lactobacillus is from chicken Lactobacillus (inducible), ODC_ Saccharomyces cerevisiae is from Saccharomyces cerevisiae (inducible).

 

Figure 12_A0101_SEQ_0001
Figure 12_A0101_SEQ_0001

Figure 12_A0101_SEQ_0002
Figure 12_A0101_SEQ_0002

Figure 12_A0101_SEQ_0003
Figure 12_A0101_SEQ_0003

Figure 12_A0101_SEQ_0004
Figure 12_A0101_SEQ_0004

Figure 12_A0101_SEQ_0005
Figure 12_A0101_SEQ_0005

Figure 12_A0101_SEQ_0006
Figure 12_A0101_SEQ_0006

Figure 12_A0101_SEQ_0007
Figure 12_A0101_SEQ_0007

Figure 12_A0101_SEQ_0008
Figure 12_A0101_SEQ_0008

Figure 12_A0101_SEQ_0009
Figure 12_A0101_SEQ_0009

Figure 12_A0101_SEQ_0010
Figure 12_A0101_SEQ_0010

Figure 12_A0101_SEQ_0011
Figure 12_A0101_SEQ_0011

Figure 12_A0101_SEQ_0012
Figure 12_A0101_SEQ_0012

Figure 12_A0101_SEQ_0013
Figure 12_A0101_SEQ_0013

Figure 12_A0101_SEQ_0014
Figure 12_A0101_SEQ_0014

Figure 12_A0101_SEQ_0015
Figure 12_A0101_SEQ_0015

Figure 12_A0101_SEQ_0016
Figure 12_A0101_SEQ_0016

Figure 12_A0101_SEQ_0017
Figure 12_A0101_SEQ_0017

Figure 12_A0101_SEQ_0018
Figure 12_A0101_SEQ_0018

Figure 12_A0101_SEQ_0019
Figure 12_A0101_SEQ_0019

Figure 12_A0101_SEQ_0020
Figure 12_A0101_SEQ_0020

Figure 12_A0101_SEQ_0021
Figure 12_A0101_SEQ_0021

Figure 12_A0101_SEQ_0022
Figure 12_A0101_SEQ_0022

Figure 12_A0101_SEQ_0023
Figure 12_A0101_SEQ_0023

Figure 12_A0101_SEQ_0024
Figure 12_A0101_SEQ_0024

Figure 12_A0101_SEQ_0025
Figure 12_A0101_SEQ_0025

Figure 12_A0101_SEQ_0026
Figure 12_A0101_SEQ_0026

Figure 12_A0101_SEQ_0027
Figure 12_A0101_SEQ_0027

Figure 12_A0101_SEQ_0028
Figure 12_A0101_SEQ_0028

Figure 12_A0101_SEQ_0029
Figure 12_A0101_SEQ_0029

Figure 12_A0101_SEQ_0030
Figure 12_A0101_SEQ_0030

Figure 12_A0101_SEQ_0031
Figure 12_A0101_SEQ_0031

Figure 12_A0101_SEQ_0032
Figure 12_A0101_SEQ_0032

Figure 12_A0101_SEQ_0033
Figure 12_A0101_SEQ_0033

Figure 12_A0101_SEQ_0034
Figure 12_A0101_SEQ_0034

Figure 12_A0101_SEQ_0035
Figure 12_A0101_SEQ_0035

Figure 12_A0101_SEQ_0036
Figure 12_A0101_SEQ_0036

Figure 12_A0101_SEQ_0037
Figure 12_A0101_SEQ_0037

Figure 12_A0101_SEQ_0038
Figure 12_A0101_SEQ_0038

Figure 12_A0101_SEQ_0039
Figure 12_A0101_SEQ_0039

Figure 12_A0101_SEQ_0040
Figure 12_A0101_SEQ_0040

Figure 12_A0101_SEQ_0041
Figure 12_A0101_SEQ_0041

Figure 12_A0101_SEQ_0042
Figure 12_A0101_SEQ_0042

Figure 12_A0101_SEQ_0043
Figure 12_A0101_SEQ_0043

Figure 12_A0101_SEQ_0044
Figure 12_A0101_SEQ_0044

Figure 12_A0101_SEQ_0045
Figure 12_A0101_SEQ_0045

Figure 12_A0101_SEQ_0046
Figure 12_A0101_SEQ_0046

Figure 12_A0101_SEQ_0047
Figure 12_A0101_SEQ_0047

Figure 12_A0101_SEQ_0048
Figure 12_A0101_SEQ_0048

Figure 12_A0101_SEQ_0049
Figure 12_A0101_SEQ_0049

Figure 12_A0101_SEQ_0050
Figure 12_A0101_SEQ_0050

Figure 12_A0101_SEQ_0051
Figure 12_A0101_SEQ_0051

Figure 12_A0101_SEQ_0052
Figure 12_A0101_SEQ_0052

Figure 12_A0101_SEQ_0053
Figure 12_A0101_SEQ_0053

Figure 12_A0101_SEQ_0054
Figure 12_A0101_SEQ_0054

Figure 12_A0101_SEQ_0055
Figure 12_A0101_SEQ_0055

Figure 12_A0101_SEQ_0056
Figure 12_A0101_SEQ_0056

Figure 12_A0101_SEQ_0057
Figure 12_A0101_SEQ_0057

Figure 12_A0101_SEQ_0058
Figure 12_A0101_SEQ_0058

Figure 12_A0101_SEQ_0059
Figure 12_A0101_SEQ_0059

Figure 12_A0101_SEQ_0060
Figure 12_A0101_SEQ_0060

Figure 12_A0101_SEQ_0061
Figure 12_A0101_SEQ_0061

Figure 12_A0101_SEQ_0062
Figure 12_A0101_SEQ_0062

Figure 12_A0101_SEQ_0063
Figure 12_A0101_SEQ_0063

Figure 12_A0101_SEQ_0064
Figure 12_A0101_SEQ_0064

Figure 12_A0101_SEQ_0065
Figure 12_A0101_SEQ_0065

Figure 12_A0101_SEQ_0066
Figure 12_A0101_SEQ_0066

Claims (16)

一種鳥胺酸脫羧酶變異體,其在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置、或c)第713個位置及第698個位置處包括胺基酸取代,與SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性。A variant of ornithine decarboxylase, which includes an amino acid at a) 713th position, b) 698th position, or c) 713th position and 698th position corresponding to SEQ ID NO:1 Substitution, it has a sequence homology of at least 80% and less than 100% with the polypeptide of SEQ ID NO:1. 如申請專利範圍第1項所述的鳥胺酸脫羧酶變異體,其中所述第713個位置的胺基酸取代是由除丙胺酸以外的疏水性胺基酸、鹼性胺基酸、酸性胺基酸、中性胺基酸或芳香族性胺基酸取代。The ornithine decarboxylase variant as described in item 1 of the scope of patent application, wherein the amino acid substitution at the 713th position is made by hydrophobic amino acids, basic amino acids, acidic amino acids other than alanine Amino acid, neutral amino acid or aromatic amino acid substitution. 如申請專利範圍第1項所述的鳥胺酸脫羧酶變異體,其中所述第713個位置的胺基酸取代為A713L、A713I、A713V、A713R、A713D、A713W或A713Q。The ornithine decarboxylase variant as described in item 1 of the scope of patent application, wherein the amino acid at the 713th position is substituted with A713L, A713I, A713V, A713R, A713D, A713W or A713Q. 如申請專利範圍第1項所述的鳥胺酸脫羧酶變異體,其中所述第698個位置的胺基酸取代為E698D。The ornithine decarboxylase variant described in item 1 of the scope of patent application, wherein the amino acid at the 698th position is substituted with E698D. 如申請專利範圍第1項所述的鳥胺酸脫羧酶變異體,其中所述第713個位置的胺基酸取代為A713L、A713I、A713V、A713R、A713D、A713W或A713Q,所述第698個位置的胺基酸取代為E698D。The ornithine decarboxylase variant described in item 1 of the scope of patent application, wherein the amino acid at the 713th position is substituted with A713L, A713I, A713V, A713R, A713D, A713W or A713Q, the 698th The amino acid at position is substituted with E698D. 如申請專利範圍第1項所述的鳥胺酸脫羧酶變異體,其中所述鳥胺酸脫羧酶變異體包括選自SEQ ID NO:4、SEQ ID NO:8、SEQ ID NO:9及SEQ ID NO:19至SEQ ID NO:23中的多肽。The ornithine decarboxylase variant as described in item 1 of the scope of the patent application, wherein the ornithine decarboxylase variant comprises a variant selected from SEQ ID NO: 4, SEQ ID NO: 8, SEQ ID NO: 9 and SEQ ID NO:19 to the polypeptide in SEQ ID NO:23. 一種聚核苷酸,其編碼如申請專利範圍第1項至第6項中任一項所述的鳥胺酸脫羧酶變異體。A polynucleotide encoding the ornithine decarboxylase variant according to any one of items 1 to 6 in the scope of the patent application. 一種微生物,其包括如下的鳥胺酸脫羧酶:包括SEQ ID NO:1的多肽、或在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置或c)第713個位置及第698個位置處包括胺基酸取代且相對於SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性的多肽。A microorganism comprising the following ornithine decarboxylase: comprising the polypeptide of SEQ ID NO:1, or at a) 713th position, b) 698th position or c) 713th position corresponding to SEQ ID NO:1 A polypeptide that includes amino acid substitutions at two positions and the 698th position and has a sequence homology of at least 80% and less than 100% relative to the polypeptide of SEQ ID NO:1. 如申請專利範圍第8項所述的微生物,其中所述微生物為埃希氏菌屬或棒狀桿菌屬。The microorganism described in item 8 of the scope of patent application, wherein the microorganism is of the genus Escherichia or Corynebacterium. 一種丁二胺的生產方法,其包括培養包含鳥胺酸脫羧酶的微生物, 其中所述鳥胺酸脫羧酶包括SEQ ID NO:1的多肽、或在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置或c)第713個位置及第698個位置處包括胺基酸取代且相對於所述SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性的多肽。A method for producing butanediamine, which includes culturing a microorganism containing ornithine decarboxylase, Wherein the ornithine decarboxylase includes the polypeptide of SEQ ID NO:1, or corresponding to SEQ ID NO:1 at a) the 713th position, b) the 698th position or c) the 713th position and the 698th position. A polypeptide that includes amino acid substitutions at three positions and has at least 80% or more and less than 100% sequence homology relative to the polypeptide of SEQ ID NO:1. 如申請專利範圍第10項所述的丁二胺的生產方法,其包括於培養基內累積丁二胺。The method for producing butanediamine as described in item 10 of the scope of patent application includes accumulating butanediamine in a culture medium. 如申請專利範圍第10項所述的丁二胺的生產方法,其包括自培養的所述微生物或培養基回收丁二胺。The method for producing butanediamine as described in item 10 of the scope of patent application includes recovering butanediamine from the cultured microorganism or culture medium. 一種增加丁二胺的純度的方法,其包括培養包含鳥胺酸脫羧酶的微生物, 其中所述鳥胺酸脫羧酶包括SEQ ID NO:1的多肽、或在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置或c)第713個位置及第698個位置位置處包括胺基酸取代且相對於所述SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性的多肽。A method for increasing the purity of butanediamine, which includes culturing microorganisms containing ornithine decarboxylase, Wherein the ornithine decarboxylase includes the polypeptide of SEQ ID NO:1, or corresponding to SEQ ID NO:1 at a) the 713th position, b) the 698th position or c) the 713th position and the 698th position. A polypeptide that includes amino acid substitutions at each position and has a sequence homology of at least 80% and less than 100% relative to the polypeptide of SEQ ID NO:1. 一種增加丁二胺相對於戊二胺的比率的方法,其包括培養包含鳥胺酸脫羧酶的微生物, 其中所述鳥胺酸脫羧酶包括SEQ ID NO:1的多肽、或在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置或c)第713個位置及第698個位置處包括胺基酸取代且相對於所述SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性的多肽。A method for increasing the ratio of butanediamine to pentamethylenediamine, which includes culturing a microorganism containing ornithine decarboxylase, Wherein the ornithine decarboxylase includes the polypeptide of SEQ ID NO:1, or corresponding to SEQ ID NO:1 at a) the 713th position, b) the 698th position or c) the 713th position and the 698th position. A polypeptide that includes amino acid substitutions at three positions and has at least 80% or more and less than 100% sequence homology relative to the polypeptide of SEQ ID NO:1. 一種聚醯胺的製備方法,其是利用丁二胺製備聚醯胺的方法,所述丁二胺是藉由培養包括鳥胺酸脫羧酶的微生物而製備,所述鳥胺酸脫羧酶包括SEQ ID NO:1的多肽、或在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置或c)第713個位置及第698個位置處包括胺基酸取代且相對於所述SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性的多肽。A preparation method of polyamide, which is a method for preparing polyamide by using butanediamine, said butanediamine is prepared by cultivating microorganisms including ornithine decarboxylase, and said ornithine decarboxylase includes SEQ ID NO:1 polypeptide, or a) corresponding to SEQ ID NO:1 at the 713th position, b) the 698th position or c) the 713th position and the 698th position including amino acid substitution and relative The polypeptide of SEQ ID NO:1 has a sequence homology of at least 80% and less than 100%. 一種聚醯胺製備用組成物,其包括包含鳥胺酸脫羧酶的微生物,所述鳥胺酸脫羧酶包括SEQ ID NO:1的多肽、或在對應於SEQ ID NO:1的a)第713個位置、b)第698個位置或c)第713個位置及第698個位置處包括胺基酸取代且相對於所述SEQ ID NO:1的多肽具有至少80%以上且未滿100%的序列同源性的多肽。A composition for the preparation of polyamides, which comprises a microorganism comprising ornithine decarboxylase, said ornithine decarboxylase comprising the polypeptide of SEQ ID NO: 1 or a) corresponding to SEQ ID NO: 1 Positions, b) the 698th position or c) the 713th position and the 698th position include amino acid substitutions and have at least 80% or more and less than 100% relative to the polypeptide of SEQ ID NO:1 Polypeptides of sequence homology.
TW108147355A 2018-12-28 2019-12-24 Ornithine decarboxylase variants, methods for producing putrescine using the same, polynucleotide, microorganism, method for preparing polyamine, and composition for preparing polyamide TWI756604B (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
TW107147749 2018-12-28
TW107147749 2018-12-28

Publications (2)

Publication Number Publication Date
TW202030327A true TW202030327A (en) 2020-08-16
TWI756604B TWI756604B (en) 2022-03-01

Family

ID=73002771

Family Applications (1)

Application Number Title Priority Date Filing Date
TW108147355A TWI756604B (en) 2018-12-28 2019-12-24 Ornithine decarboxylase variants, methods for producing putrescine using the same, polynucleotide, microorganism, method for preparing polyamine, and composition for preparing polyamide

Country Status (1)

Country Link
TW (1) TWI756604B (en)

Also Published As

Publication number Publication date
TWI756604B (en) 2022-03-01

Similar Documents

Publication Publication Date Title
US11667936B2 (en) Modified polypeptide with attenuated activity of citrate synthase and method for producing L-amino acid using the same
TWI718385B (en) Novel aspartokinase variant and method for producing l-amino acid using the same
RU2763603C1 (en) New variant of an l-tryptophan exporting protein and method for producing l-tryptophan with application thereof
JP6980819B2 (en) A novel O-succinyl homoserine transferase mutant and a method for producing O-succinyl homoserine using the same.
JP2020523989A (en) Novel polypeptide and method for producing ornithine product using the same
RU2732338C1 (en) Microorganism for producing l-amino acid with high activity of α-glucosidase and method of producing l-amino acid using thereof
RU2747494C1 (en) New o-succinyl homoserine transferase mutant and method for synthesis of o-succinyl homoserine using said mutant
JP7214952B2 (en) Ornithine decarboxylase mutant and method for producing putrescine using the same
AU2022206623B2 (en) Glxr protein variant or threonine production method using same
EP4230723A1 (en) Polypeptide with aspartate kinase activity and use thereof in production of amino acid
CN115135759B (en) Novel glucosamine-6-phosphate deaminase variant and method for producing L-glutamic acid using same
TWI756604B (en) Ornithine decarboxylase variants, methods for producing putrescine using the same, polynucleotide, microorganism, method for preparing polyamine, and composition for preparing polyamide
JP2022001049A (en) Novel polypeptide, and method for producing ornithine-based product using the same
CN115500080A (en) Novel bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase variants and methods of producing XMP or GMP using the same
CN115135760A (en) Novel ferrous iron decocting enzyme variant and method for producing L-tryptophan by using same
US20230287382A1 (en) Ornithine decarboxylase variant and method for producing putrescine by using same
RU2805253C1 (en) New modified polypeptide with reduced citrate synthase activity and method for producing l-amino acid using it
JP2022130759A (en) Ornithine decarboxylase mutant and production method of putrescine using the same
RU2793429C1 (en) New variant of dihydrolipoamidacetiltransferase and a method for obtaining l-valine with its use
CA3221038A1 (en) Novel variant regulator of acetate metabolism a and method of producing l-branched-chain amino acid using the same
AU2022229156A1 (en) Isopropylmalate synthase variant and a method of producing L-leucine using the same
CA3228544A1 (en) Novel acetohydroxy acid synthase subunit variant and method for producing l-valine using same
KR20230042224A (en) Recombinant strains producing L-amino acids and their construction methods and applications
CN115551999A (en) Novel adenine phosphoribosyltransferase variant and method for producing IMP using same
CN114981292A (en) Novel protein HTRL variant and method for producing L-tryptophan by using same