TW201831503A - Mphosph1 epitope peptides for th1 cells and vaccines containing the same - Google Patents

Mphosph1 epitope peptides for th1 cells and vaccines containing the same Download PDF

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TW201831503A
TW201831503A TW106139302A TW106139302A TW201831503A TW 201831503 A TW201831503 A TW 201831503A TW 106139302 A TW106139302 A TW 106139302A TW 106139302 A TW106139302 A TW 106139302A TW 201831503 A TW201831503 A TW 201831503A
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西村泰治
平山真敏
鶴田未季
山下祥子
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日商腫瘤療法 科學股份有限公司
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Abstract

Isolated MPHOSPH1-derived epitope peptides having Th1 cell inducibility are disclosed herein. Such peptides can be recognized by MHC class II molecules and induce Th1 cells. In preferred embodiments, such a peptide of the present invention can promiscuously bind to MHC class II molecules and induce MPHOSPH1-specific CTLs in addition to Th1 cells. Such peptides are thus suitable for use in enhancing immune response in a subject, and accordingly find use in cancer immunotherapy, in particular, as cancer vaccines. Also disclosed herein are polynucleotides that encode any of the aforementioned peptides, APCs and Th1 cells induced by such peptides and methods of induction associated therewith. Pharmaceutical compositions that comprise any of the aforementioned components as active ingredients find use in the treatment and/or prevention of cancers or tumors including, for example, bladder cancer and breast cancer.

Description

對於TH1細胞的MPHOSPH1抗原決定位胜肽及包含其之疫苗    MPHOSPH1 epitope peptide for TH1 cells and vaccine containing same   

本發明係關於生物科學領域,更具體而言,係關於癌症治療的領域。尤其,本發明係關於新穎的胜肽,其作為癌症疫苗與治療或預防腫瘤、或治療及預防腫瘤的藥物極為有效。 The present invention relates to the field of biological sciences, and more specifically to the field of cancer treatment. In particular, the present invention relates to novel peptides, which are extremely effective as cancer vaccines and drugs for treating or preventing tumors, or for treating and preventing tumors.

[優先權] [Priority]

本申請案基於2016年11月18日提申的日本專利申請案號JP2016-224625主張優惠,其完整內容引入於此作為參考。 This application claims a benefit based on Japanese Patent Application No. JP2016-224625 filed on November 18, 2016, the entire contents of which are incorporated herein by reference.

已有人證明CD8陽性細胞毒性T淋巴球(CTL)會辨識在主要組織相容性複合體(MHC)第I類分子上發現之衍生自腫瘤關聯抗原(TAA)的抗原決定基胜肽,且之後殺死該腫瘤細胞。自從發現黑色素瘤抗原(MAGE)家族為TAA的第一例以來,已主要利用免疫學方法發現了許多其他的TAA(非專利文獻1、2)。此等TAA當中有些正當做免疫療法的標靶進行臨床開發當中。 It has been demonstrated that CD8-positive cytotoxic T-lymphocytes (CTLs) recognize epitope-derived peptides derived from tumor-associated antigens (TAA) found on major histocompatibility complex (MHC) class I molecules, and have Kill the tumor cells. Since the discovery of the melanoma antigen (MAGE) family as the first case of TAA, many other TAAs have been mainly discovered using immunological methods (Non-Patent Documents 1, 2). Some of these TAAs are being used as targets for immunotherapy in clinical development.

對於癌細胞的增殖與存活不可欠缺之TAA對於做為免疫療法之標靶是有利的,由於使用此種TAA能降低在治療所驅使的免疫選擇當中由於TAA的刪除、突變或下調所造成的癌細胞的免疫逃脫的風險到最小。因此,能夠誘導有效及專一性抗腫瘤免疫反應的新TAA之鑑別確保進一步的發展。目 前,對於許多類型癌症的胜肽疫苗策略的臨床應用正在進行著(非專利文獻3~10)。到目前,已有數個使用這些TAA衍生胜肽的臨床試驗的報告。不幸地,到目前為止,這些癌症疫苗試驗僅產生低目標反應率(非專利文獻11至13)。因此,於本技術領域中,仍需要適合作為免疫治療的標靶之新的TAA。 TAA, which is indispensable for the proliferation and survival of cancer cells, is advantageous as a target for immunotherapy, because the use of this TAA can reduce cancer caused by deletion, mutation or down-regulation of TAA in the immune selection driven by treatment. The risk of cellular immune escape is minimized. Therefore, the identification of new TAAs capable of inducing effective and specific anti-tumor immune responses ensures further development. Currently, the clinical application of peptide vaccine strategies for many types of cancer is ongoing (Non-Patent Documents 3 to 10). To date, several clinical trials using these TAA-derived peptides have been reported. Unfortunately, these cancer vaccine trials have so far produced only low target response rates (Non-Patent Documents 11 to 13). Therefore, there is still a need in the art for new TAAs suitable as targets for immunotherapy.

最近,本案發明人利用全基因組(genome-wide)cDNA微陣列分析鑑別出一種癌症-睪丸抗原,M期磷蛋白1(M-phase phosphoproteinl,MPHOSPH1),其經常於膀胱癌、乳癌及許多其他的惡性腫瘤中過度表現(非專利文獻14至17)。藉由使用小干擾RNA抑制MPHOSPH1表現,顯著地抑制膀胱癌細胞的生長。因此,MPHOSPH1對腫瘤生長和存活是必需的,其顯示這些抗原作為抗原專一性癌症免疫療法的標靶的臨床重要性。本案發明人也鑑別出能夠從膀胱癌病患的周邊血液單核細胞(PBMC)誘導經HLA-A24(A*24:02)限制之CTL之高免疫原性MPHOSPH1-衍生短胜肽(SP)(專利文獻1、2、非專利文獻18)。在膀胱內接種BCG和MPHOSPH1-衍生SP疫苗的結合免疫療法臨床試驗第I/II期顯示,對於預防非肌肉入侵的膀胱癌的復發及誘導CTL的安全性和良好免疫原性具有大有可為的臨床效果(非專利文獻18)。因此,對癌症免疫療法而言,MPHOSPH1是有吸引力的目標分子。 Recently, the inventors of the present case have used a genome-wide cDNA microarray analysis to identify a cancer-testicle antigen, M-phase phosphoprotein1 (MPHOSPH1), which is often used in bladder cancer, breast cancer and many other Excessive expression in malignant tumors (Non-Patent Documents 14 to 17). By using small interfering RNA to suppress MPHOSPH1 performance, it significantly inhibits the growth of bladder cancer cells. Therefore, MPHOSPH1 is necessary for tumor growth and survival, which shows the clinical importance of these antigens as targets for antigen-specific cancer immunotherapy. The inventors also identified a highly immunogenic MPHOSPH1-derived short peptide (SP) capable of inducing HLA-A24 (A * 24: 02) -restricted CTLs from peripheral blood mononuclear cells (PBMCs) of bladder cancer patients (Patent Documents 1, 2, and Non-Patent Documents 18). Phase I / II clinical trials of combined immunotherapy with BCG and MPHOSPH1-derived SP vaccine in the bladder have shown promising safety and good immunogenicity in preventing the recurrence of non-muscle invasive bladder cancer and inducing CTL. (Non-Patent Document 18). Therefore, MPHOSPH1 is an attractive target molecule for cancer immunotherapy.

腫瘤專一性CD4+輔助T(Th)細胞,特別是T-輔助1型(Th1)細胞,在有效率地誘導CTL媒介之抗腫瘤免疫性方面扮演關鍵性角色(非專利文獻19)。主要由Th1細胞產生的干擾素(interferon,IFN)-γ及腫瘤壞死因子(tumor necrosis facto,TNF)-α,對於誘導及維持長期CTL反應係關鍵性的,其介由對於保持免疫記憶為關鍵性之多重交互作用提供幫助(非專利文獻20、21、22)。Th1細胞所分泌的IFN-γ,也媒介直接的抗腫瘤或抗血管生成作用(非專利文獻23)。又,據顯示Th細胞必須鋪路以供CTL進入腫瘤部位(非專利文獻24)。Melief等人最近報導,人類乳頭狀瘤病毒(papillomavirus)-衍生的合成LP自然地包含CTL抗 原決定位作為治療外陰癌和子宮頸癌的有吸引力的疫苗化合物(非專利文獻25)。在注射LP之後,病患的DC攝入並處理LP,並分別在病患的HLA第I和II類分子的背景下,呈現可能的CTL和Th細胞抗原決定位(非專利文獻28)。此外,當結合放射治療和化學治療時,最近的臨床研究使用稱為GV1001的混雜端粒酶-衍生的輔助-抗原決定位(telomerase-derived helper-epitope)的疫苗增加癌症病患的存活(非專利文獻26、27)。所以,能夠活化專一性Th1細胞的TAA-衍生的Th細胞抗原決定位的鑑別,對於在罹患腫瘤的主體誘導有效的腫瘤免疫是重要;理想上,設計有效的疫苗應包括多個抗原決定位,以刺激CTL與Th1細胞兩者(非專利文獻25)。但是,目前尚未鑑別出衍生自MPHOSPH1的此種抗原決定位。 Tumor-specific CD4 + helper T (Th) cells, especially T-helper type 1 (Th1) cells, play a key role in efficiently inducing the antitumor immunity of CTL vectors (Non-Patent Document 19). Interferon (IFN) -γ and tumor necrosis facto (TNF) -α, which are mainly produced by Th1 cells, are critical to the induction and maintenance of long-term CTL response, and their key role is to maintain immune memory. Multiple sexual interactions help (Non-Patent Documents 20, 21, 22). IFN-γ secreted by Th1 cells also has a direct antitumor or antiangiogenic effect (Non-Patent Document 23). Furthermore, it has been shown that Th cells must pave the way for CTLs to enter the tumor site (Non-patent Document 24). Melief et al. Recently reported that human papillomavirus-derived synthetic LP naturally contains a CTL epitope as an attractive vaccine compound for the treatment of vulvar cancer and cervical cancer (Non-Patent Document 25). After injection of LP, the patient's DC takes up and processes the LP, and presents possible CTL and Th cell epitopes in the context of the patient's HLA class I and II molecules, respectively (Non-Patent Document 28). In addition, when combining radiation and chemotherapy, recent clinical studies have used a hybrid telomerase-derived helper-epitope vaccine called GV1001 to increase the survival of cancer patients (non- (Patent Documents 26, 27). Therefore, the identification of TAA-derived Th cell epitopes capable of activating specific Th1 cells is important for inducing effective tumor immunity in subjects suffering from tumors; ideally, designing an effective vaccine should include multiple epitopes, In order to stimulate both CTL and Th1 cells (Non-Patent Document 25). However, no such epitope derived from MPHOSPH1 has yet been identified.

[引用列表] [Quote list]

[專利文獻] [Patent Literature]

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[專利文獻2] WO2013/024582 [Patent Document 2] WO2013 / 024582

[非專利文獻] [Non-patent literature]

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膀胱癌是有關泌尿系統最常見的惡性腫瘤。以鉑為基礎的化學療法仍為末期/轉移性泌尿上皮癌(urothelial carcinoma,UC)的第一線治療的標準照 護(van der Maase H,et al.J Clin Oncol 1996;156;9:3308-14;Gupta S,et al.,Cancers 2017;9;(2):pii:E15)。在接收以鉑為基礎的化學療法的標準治療的那些轉移性膀胱癌中,估計整體存活9-15個月;膀胱癌第IV期具有約15%的五年相對存活率(van der Maase H,et al.,supra;De Sanis M,et al.,J Clin Oncol 2012;30;2:191-9)。直到最近,對化學療法有耐受性或因嚴重的有害反應而無法忍受化學療法的病患才有一些治療選擇,且整體結果仍非常差(Gupta S,et al.,supra)。目前,使用計劃性細胞死亡蛋白質1(programmed cell death protein 1,PD-1)-和PD-1配位體(PD-L1)-專一性單株抗體的全身性免疫療法,亦即分別為Nivolumab/Pembrolizumab和Atezolizumab,已許可用於泌尿膀胱癌的治療,以達成反應率顯著的改善(Gupta S,et al.,supra;Zichi C,et al.,Biomed Res Int 2017;2017(561874.Doi:10.1155/2017/5618174))。另一最近的臨床試驗顯示,對進展中的UC所投予的MPHOSPH1-衍生的SP疫苗是安全且被良好耐受且有效率地活化CTL(Obara W,et al.,Ann Oncol)2017;28;4;798-803)。 Bladder cancer is the most common malignancy related to the urinary system. Platinum-based chemotherapy remains standard care for first-line treatment of end-stage / metastatic urothelial carcinoma (UC) (van der Maase H, et al. J Clin Oncol 1996; 156; 9: 3308- 14; Gupta S, et al., Cancers 2017; 9; (2): pii: E15). Among those with metastatic bladder cancer receiving standard treatment with platinum-based chemotherapy, overall survival is estimated to be 9-15 months; bladder cancer stage IV has a five-year relative survival rate of about 15% (van der Maase H, et al., supra; De Sanis M, et al., J Clin Oncol 2012; 30; 2: 191-9). Until recently, there were some treatment options for patients who were resistant to chemotherapy or could not tolerate chemotherapy due to severe adverse reactions, and overall results were still very poor (Gupta S, et al., Supra). At present, systemic immunotherapy using programmed cell death protein 1 (PD-1)-and PD-1 ligand (PD-L1) -specific monoclonal antibodies, namely Nivolumab, respectively / Pembrolizumab and Atezolizumab, have been licensed for the treatment of urinary bladder cancer to achieve a significant improvement in response rate (Gupta S, et al., Supra; Zichi C, et al., Biomed Res Int 2017; 2017 (561874. Doi: 10.1155 / 2017/5618174)). Another recent clinical trial shows that MPHOSPH1-derived SP vaccine administered to UC in progress is safe, well tolerated, and efficiently activates CTL (Obara W, et al., Ann Oncol) 2017; 28 4; 798-803).

於本發明之上下文,本案發明人考慮一種理想的供癌免疫療法的胜肽疫苗係包括針對CTL與Th1細胞兩者的抗原決定位的單一胜肽,此兩者的抗原決定位在天然上係彼此靠近。 In the context of the present invention, the present inventors consider an ideal peptide vaccine line for cancer immunotherapy comprising a single peptide against epitopes of both CTL and Th1 cells, the epitopes of both of which are naturally occurring Close to each other.

為此,本案發明人設計一策略以鑑別一新穎的MPHOSPH1衍生的Th1細胞的抗原決定位,其係可於混雜的HLA第II類分子之背景中被辨識且含有CTL抗原決定位,並假設所辨識之抗原決定位會誘導更有效率之經T細胞媒介之腫瘤免疫性。使用了預測HLA第II類結合胜肽與已知由經HLA-A24(A*24:02)或HLA-A2(A*02:01)限制之CTL辨識之CTL抗原決定位序列的電腦演算法,來選擇候選的含有CTL抗原決定位之混雜的HLA-第II類限制Th1細胞抗原決定位。 For this reason, the inventors of this case devised a strategy to identify a novel epitope of MPHOSPH1-derived Th1 cells, which can be identified in the context of promiscuous HLA class II molecules and contains CTL epitopes, assuming that The identified epitopes will induce more efficient T cell-mediated tumor immunity. Computer algorithm for predicting HLA class II binding peptides and CTL epitope sequences known to be recognized by CTLs restricted by HLA-A24 (A * 24: 02) or HLA-A2 (A * 02: 01) To select candidate hybrid HLA-type II restricted epitopes containing CTL epitopes.

本發明至少部分係基於發現作為誘導Th1細胞反應之免疫療法的標靶的適合抗原決定位胜肽。體認到MPHOSPH1基因在一些癌症類型中係向 上調控,包括膀胱癌及乳癌,本發明目標為進一步分析此MPHOSPH1基因之基因產物,特別是由GenBank存取如編號NM_001284259(序列識別號:5)或由GenBank存取如編號NM_016195(序列識別號:7)所示之基因編碼陳列於之序列識別號:6或8中的多胜肽。在進一步的研究中特別選擇含有會誘導專一於對應分子之Th1細胞的抗原決定位胜肽的MPHOSPH1基因產物。例如,將從健康捐贈者獲得之周邊血液單核細胞(PBMC)使用衍生自人類MPHOSPH1的混雜的HLA-DR及/或DP結合胜肽予以刺激。建立辨識經以各別的候選胜肽脈衝的HLA-DR或DP陽性目標細胞的Th1細胞,並且鑑別可誘導對抗MPHOSPH1之有效及專一性免疫反應之經HLA-DR及/或DP限制之抗原決定位胜肽。此等結果證明MPHOSPH1有強力的免疫原性,且其抗原決定位對於經由Th1細胞反應媒介的腫瘤免疫療法有效。更進一步的研究顯示含有至少一種CTL抗原決定位之混雜的HLA-DR及/或DP結合胜肽也會在同一捐贈者以MPHOSPH1專一性的方式刺激CTL反應。此等結果確認MPHOSPH1係強力免疫原性,且MPHOSPH1-衍生胜肽含有Th1細胞與CTL抗原決定位兩者,對於經由Th1細胞與CTL反應媒介之腫瘤免疫療法係有效。 The invention is based at least in part on finding suitable epitope peptides as targets for immunotherapy that induces Th1 cell responses. It is recognized that the MPHOSPH1 gene is up-regulated in some types of cancer, including bladder cancer and breast cancer. The objective of the present invention is to further analyze the gene product of the MPHOSPH1 gene, and especially to be accessed by GenBank such as number NM_001284259 (sequence identification number: 5) or The gene code shown in No. NM_016195 (sequence identification number: 7) from GenBank accesses the polypeptide in sequence identification number: 6 or 8. In further research, the MPHOSPH1 gene product containing an epitope peptide that induces Th1 cells specific to the corresponding molecule was specifically selected. For example, peripheral blood mononuclear cells (PBMCs) obtained from healthy donors are stimulated with a hybrid HLA-DR and / or DP-binding peptide derived from human MPHOSPH1. Establish Th1 cells that identify HLA-DR or DP-positive target cells pulsed with individual candidate peptides, and identify HLA-DR and / or DP-restricted antigenic decisions that induce an effective and specific immune response against MPHOSPH1 Peptides. These results demonstrate that MPHOSPH1 has strong immunogenicity and that its epitope is effective for tumor immunotherapy via Th1 cell response vector. Further studies have shown that hybrid HLA-DR and / or DP-binding peptides containing at least one CTL epitope can also stimulate CTL responses in the same donor in a MPHOSPH1-specific manner. These results confirm that MPHOSPH1 is strongly immunogenic, and that MPHOSPH1-derived peptide contains both Th1 cells and CTL epitopes, and is effective for tumor immunotherapy systems via Th1 cells and CTL response vectors.

因此本發明之一目的係提供具有Th1細胞誘導能力及選自序列識別號:1至2之胺基酸序列的胜肽。本發明思考修飾之胜肽,即具有Th1誘導能力且長度至多30個胺基酸且具有選自序列識別號:6或8(MPHOSPH1)之胺基酸序列之連續胺基酸序列的胜肽,及其功能上均等物。或者,本發明提供一具有Th1細胞誘導能力和CTL誘導能力的胜肽。於一些具體例,本發明之胜肽回應於序列識別號:1至2之胺基酸序列或其經修飾的版本,其中,有2個或更多的胺基酸被取代、刪除、插入及/或加成而仍維持誘導Th1細胞的能力。 Therefore, an object of the present invention is to provide a peptide having Th1 cell inducing ability and an amino acid sequence selected from the sequence identification numbers: 1 to 2. The present invention contemplates modified peptides, that is, peptides having Th1 inducing ability and up to 30 amino acids in length and having a continuous amino acid sequence selected from the amino acid sequence of sequence identification number: 6 or 8 (MPHOSPH1), And functionally equivalent. Alternatively, the present invention provides a peptide having Th1 cell inducing ability and CTL inducing ability. In some specific examples, the peptides of the present invention respond to the sequence identification numbers: amino acid sequences of 1 to 2 or modified versions thereof, in which 2 or more amino acids are substituted, deleted, inserted, and / Or addition while still maintaining the ability to induce Th1 cells.

當本胜肽對於一對象投予時,本發明胜肽較佳係呈現在一或多種抗原呈現細胞(antigen-presenting cell,APC)的表面上,而誘導Th1細胞。當本發 明之胜肽更含有至少一CTL抗原決定位,此APC也會處理此胜肽以呈現從此胜肽產生之CTL抗原決定位,因而誘導靶向於各胜肽之CTL。因此,本發明之另一目的為提供呈現任一本發明之胜肽或其片段的APC,並提供誘導APC之方法。 When the peptide is administered to a subject, the peptide of the present invention is preferably presented on the surface of one or more antigen-presenting cells (APC) to induce Th1 cells. When the peptide of the present invention further contains at least one CTL epitope, the APC will also process the peptide to present the CTL epitope generated from the peptide, thereby inducing CTLs targeted to each peptide. Therefore, another object of the present invention is to provide an APC that presents any of the peptides or fragments thereof of the present invention, and to provide a method for inducing APC.

投予一或更多本發明之胜肽或編碼為此種胜肽之聚核苷酸,或呈現此種胜肽或其片段之APC,會因而誘導強力的抗腫瘤免疫反應。因此本發明之又另一目的為提供一種醫藥藥劑或組合物,其包含作為有效成分如以下成分中之一或更多種:(a)一或多種本發明之胜肽、(b)一或多種編碼為此種胜肽之聚核苷酸,及(c)一或多種本發明之APC。如此之本發明之醫藥藥劑或組合物,特別作為疫苗有用。 Administration of one or more of the peptides of the present invention, or polynucleotides encoding such peptides, or APCs presenting such peptides or fragments thereof, will thus induce a potent anti-tumor immune response. Therefore, another object of the present invention is to provide a medicinal medicament or composition comprising, as an active ingredient, one or more of the following ingredients: (a) one or more peptides of the present invention, (b) one or more A plurality of polynucleotides encoding such peptides, and (c) one or more APCs of the invention. Such a pharmaceutical agent or composition of the present invention is particularly useful as a vaccine.

本發明另一目的為提供癌症(即腫瘤)之治療及/或預防(亦即(避免)及/或避免其術後再復發之方法。也考慮用於誘導Th1細胞或用於誘導抗腫瘤免疫性之方法,包括投予一或多種本發明之胜肽、聚核苷酸、APC、或醫藥藥劑或組合物的步驟。再者,本發明之Th1細胞,也發現有用於作為對抗癌症之疫苗,例子包括但不限於膀胱癌及乳癌。 Another object of the present invention is to provide a method for treating and / or preventing cancer (i.e., tumor) (i.e. (avoiding) and / or preventing recurrence after surgery. It is also considered for inducing Th1 cells or for inducing anti-tumor immunity The method includes the step of administering one or more peptides, polynucleotides, APCs, or pharmaceutical agents or compositions of the present invention. Furthermore, the Th1 cells of the present invention are also found to be useful as vaccines against cancer Examples include, but are not limited to, bladder cancer and breast cancer.

本發明特別考慮之目的的例子包括以下各項: Examples of objects specifically contemplated by the present invention include the following:

[1]一種單離的胜肽,其長度為10-30個胺基酸且包含序列識別號:6或8的一部分胺基酸序列,其中該胜肽包含選自由以下構成之群組的胺基酸序列:(a)一連續的胺基酸序列,其具有選自於序列識別號:1或2之胺基酸序列中的長於9個胺基酸;及(b)一胺基酸序列,其中於(a)之胺基酸序列中有一個、二個或數個胺基酸係經取代、刪除、插入及/或附加,該胜肽有誘導Th1細胞的能力。 [1] An isolated peptide having a length of 10-30 amino acids and comprising a part of the amino acid sequence of the sequence identification number: 6 or 8, wherein the peptide includes an amine selected from the group consisting of Amino acid sequence: (a) a continuous amino acid sequence having more than 9 amino acids selected from the amino acid sequence of sequence identification number: 1 or 2; and (b) a monoamino acid sequence In which, one, two, or several amino acids in the amino acid sequence of (a) are substituted, deleted, inserted, and / or added, the peptide has the ability to induce Th1 cells.

[2]如[1]之單離的胜肽,其中,該胜肽或其片段有結合於至少2種MHC第II類分子的能力。 [2] The isolated peptide of [1], wherein the peptide or a fragment thereof has the ability to bind to at least two MHC class II molecules.

[3]如[2]之單離的胜肽,其中,該MHC第II類分子選自於由HLA-DP2, HLA-DP5,HLA-DR4及HLA-DR9構成之群組。 [3] The isolated peptide of [2], wherein the MHC class II molecule is selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9.

[4]如[1]至[3]中任一項之單離的胜肽,其中,該胜肽包含具有MPHOSPH1-專一性CTL誘導能力之胜肽的胺基酸序列。 [4] The isolated peptide according to any one of [1] to [3], wherein the peptide comprises an amino acid sequence of a peptide having MPHOSPH1-specific CTL inducing ability.

[5]如[4]之單離的胜肽,其中,該胜肽包含選自由以下構成之群組的胺基酸序列:(a)一胺基酸序列,其選自於序列識別號:1至2構成之群組;及(b)一胺基酸序列,其中於(a)之胺基酸序列中有一個、二個或數個胺基酸係經取代、刪除、插入及/或附加。 [5] The isolated peptide of [4], wherein the peptide comprises an amino acid sequence selected from the group consisting of: (a) a monoamino acid sequence selected from a sequence identification number: A group consisting of 1 to 2; and (b) an amino acid sequence in which one, two, or several amino acids are substituted, deleted, inserted, and / or in the amino acid sequence of (a) Attached.

[6]一種單離的聚核苷酸,其編碼為如[1]至[5]中任一項之胜肽。 [6] An isolated polynucleotide encoding a peptide as described in any one of [1] to [5].

[7]一種組合物,係用於誘導選自於由以下構成之群組中至少一種細胞: [7] A composition for inducing at least one cell selected from the group consisting of:

(i)Th1細胞 (i) Th1 cells

(ii)CTL (ii) CTL

(iii)有能力誘導Th1細胞之APC,及 (iii) the ability to induce APC in Th1 cells, and

(iv)有能力誘導CTL之APC;其中該組合物包含一或多種如[1]至[5]中任一項之胜肽,或一或多種編碼為此等胜肽的聚核苷酸,或一種組合物,係用於誘導選自於由以下構成之群組中至少一類型的細胞: (iv) an APC capable of inducing CTL; wherein the composition comprises one or more peptides such as any one of [1] to [5], or one or more polynucleotides encoding such peptides, Or a composition for inducing at least one type of cell selected from the group consisting of:

(i)Th1細胞 (i) Th1 cells

(ii)CTL (ii) CTL

(iii)有能力誘導Th1細胞之APC,及 (iii) the ability to induce APC in Th1 cells, and

(iv)有能力誘導CTL之APC,其中該組合物包含一或多種如[1]至[5]中任一項之胜肽,或一或多種編碼為此等胜肽的聚核苷酸。 (iv) an APC capable of inducing CTL, wherein the composition comprises one or more peptides such as any one of [1] to [5], or one or more polynucleotides encoding such peptides.

[8]一種醫藥組合物,包含選自於由以下構成之群組中之至少一種有效成分: (a)一或多種如[1]至[5]中任一項之胜肽;(b)一或多種如[6]之聚核苷酸;(c)一或多種APC,其在表面上呈現如[1]至[5]中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如[1]至[5]中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合;且此組合物被配製為供選自於由下列構成之群組中之用途: [8] A pharmaceutical composition comprising at least one active ingredient selected from the group consisting of: (a) one or more peptides according to any one of [1] to [5]; (b) One or more polynucleotides such as [6]; (c) one or more APCs that present a peptide or fragment thereof as in any one of [1] to [5] on the surface; (d) one or more A variety of Th1 cells that recognize APCs that exhibit a peptide or fragment thereof as in any of [1] to [5] on the surface; and (e) any two or more of (a) to (d) above And the composition is formulated for use in a group selected from the group consisting of:

(i)癌治療 (i) Cancer treatment

(ii)癌預防 (ii) Cancer prevention

(iii)預防癌之術後再復發,及 (iii) preventing recurrence of cancer after surgery, and

(iv)上述(i)至(iii)中任意兩或更多種的組合。 (iv) a combination of any two or more of (i) to (iii) above.

[9]如[8]之醫藥組合物,其中該組合物被配製為投予至以選自於由HLA-DP2,HLA-DP5,HLA-DR4及HLA-DR9構成之群組中至少一種作為MHC第II類分子之對象,或如[8]之醫藥組合物,其中該組合物被配製為投予至具有至少一種MHC第II類分子係選自於由HLA-DP2,HLA-DP5,HLA-DR4及HLA-DR9構成之群組之對象。 [9] The pharmaceutical composition according to [8], wherein the composition is formulated to be administered to at least one selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9 Object of MHC class II molecules, or a pharmaceutical composition as in [8], wherein the composition is formulated for administration to at least one MHC class II molecule selected from the group consisting of HLA-DP2, HLA-DP5, HLA -Objects of a group consisting of DR4 and HLA-DR9.

[10]如[8]或[9]之醫藥組合物,其中該組合物更包含有CTL誘導能力之一或多種胜肽。 [10] The pharmaceutical composition according to [8] or [9], wherein the composition further comprises one or more peptides capable of CTL induction.

[11]一種組合物,係供增強由MHC第II類分子媒介之免疫反應,該組合物包含選自於由以下構成之群組中之至少一種有效成分:(a)一或多種如[1]至[5]中任一項之胜肽;(b)一或多種如[6]之聚核苷酸;(c)一或多種APC,其在表面上呈現如[1]至[5]中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如[1]至[5]中任一項之胜肽或其 片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合。 [11] A composition for enhancing the immune response by MHC class II molecular mediators, the composition comprising at least one active ingredient selected from the group consisting of (a) one or more of the following as [1 A peptide according to any one of] to [5]; (b) one or more polynucleotides such as [6]; (c) one or more APCs, which appear on the surface as [1] to [5] A peptide or a fragment thereof according to any one; (d) one or more Th1 cells that recognize an APC that presents a peptide or a fragment thereof according to any one of [1] to [5] on the surface; and (e) ) A combination of any two or more of the above (a) to (d).

[12]一種誘導APC之方法,該APC有能力誘導Th1細胞,該方法包含使APC於體外(in vitro)、生物體外(ex vivo)或體內(in vivo)與如[1]至[5]中任一項之胜肽接觸的步驟。 [12] A method for inducing APC, the APC being capable of inducing Th1 cells, the method comprising inducing APC in vitro, ex vivo, or in vivo, as in [1] to [5] Step of contacting any of the peptides.

[13]一種誘導APC之方法,該APC有能力誘導CTL,該方法包含選自於由以下構成之群組中之步驟:(a)使APC於體外(in vitro)、生物體外(ex vivo)或體內(in vivo)與如[1]至[5]中任一項之胜肽接觸;及(b)將編碼為如[1]至[5]中任一項之胜肽的聚核苷酸導入APC。 [13] A method for inducing APC, the APC being capable of inducing CTL, the method comprising a step selected from the group consisting of: (a) inducing APC in vitro, ex vivo Or in vivo with a peptide as in any of [1] to [5]; and (b) a polynucleoside encoding a peptide as in any of [1] to [5] Acid was introduced into APC.

[14]一種誘導Th1細胞之方法,包含選自於由以下構成之群組中之步驟:(a)共同培養CD4+ T細胞,及在表面呈現MHC第II類分子與如[1]至[5]中任一項之胜肽或其片段之複合體的APC;及(b)將編碼為兩種T細胞受體(TCR)次單元之聚核苷酸、或編碼為各TCR次單元之聚核苷酸導入CD4+ T細胞內,其中該TCR能結合於在細胞表面上呈現的MHC第II類分子與如[1]至[5]中任一項之胜肽或其片段之複合體,或一種誘導Th1細胞之方法,包含選自於由以下構成之群組中之步驟:(a)共同培養CD4+ T細胞,及在表面呈現MHC第II類分子與如[1]至[5]中任一項之胜肽或其片段之複合體的APC;及(b)將編碼為兩種TCR次單元之聚核苷酸、或編碼為各TCR次單元之多重(multiple)聚核苷酸導入CD4+ T細胞內,其中該TCR能結合於在若為APC之一細胞表面上呈現的MHC第II類分子與如[1]至[5]中任一項之胜肽或其片段之複合體。 [14] A method for inducing Th1 cells, comprising the steps selected from the group consisting of: (a) co-culturing CD4 + T cells, and presenting MHC class II molecules on the surface, as in [1] to [5 APC of any of the peptides or fragments thereof; and (b) a polynucleotide encoding two T cell receptor (TCR) subunits, or a polymer encoding each TCR subunit. A nucleotide is introduced into a CD4 + T cell, wherein the TCR is capable of binding to a complex of a MHC class II molecule present on the cell surface and a peptide or a fragment thereof as in any of [1] to [5], or A method for inducing Th1 cells, comprising the steps selected from the group consisting of: (a) co-culturing CD4 + T cells, and presenting MHC class II molecules on the surface and any of [1] to [5] APC of a peptide or fragment thereof; and (b) introduction of a polynucleotide encoding two TCR subunits, or a multiple polynucleotide encoding each TCR subunit into CD4 + In T cells, the TCR is capable of binding to a complex of a MHC class II molecule and a peptide such as [1] to [5] or a fragment thereof on a cell surface if it is one of APCs.

[15]一種誘導CTL細胞之方法,該方法包含選自於由以下構成之群組中之步 驟:(a)共同培養CD4+ T細胞與CD8+ T細胞兩者,及已接觸如[4]或[5]之胜肽的APC;及(b)共同培養CD8+ T細胞,及已接觸如[4]或[5]之胜肽的APC。 [15] A method for inducing CTL cells, the method comprising the steps selected from the group consisting of: (a) co-culturing both CD4 + T cells and CD8 + T cells, and having been contacted as in [4] or [ 5] APC of the peptide; and (b) co-culture of CD8 + T cells, and APC that has been contacted with the peptide of [4] or [5].

[16]一種增強由MHC第II類分子媒介之免疫反應的方法,該方法包含對於對象投予選自於由以下構成之群組中之至少一種有效成分的步驟:(a)一或多種如[1]至[5]中任一項之胜肽;(b)一或多種如[6]之聚核苷酸;(c)一或多種APC,其在表面上呈現如[1]至[5]中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如[1]至[5]中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合。 [16] A method for enhancing an immune response by a MHC class II molecular medium, the method comprising the step of administering to a subject at least one active ingredient selected from the group consisting of: (a) one or more of the following as [ The peptide of any one of [1] to [5]; (b) one or more polynucleotides such as [6]; (c) one or more APCs that appear as [1] to [5 on the surface A peptide or a fragment thereof according to any one of []; (d) one or more Th1 cells that recognize an APC that presents a peptide or a fragment thereof according to any of [1] to [5] on a surface; and ( e) A combination of any two or more of the above (a) to (d).

[17]一種單離的APC,其在表面上呈現MHC第II類分子與如[1]至[5]中任一項之胜肽或其片段之複合體。 [17] A detached APC showing on its surface a complex of a MHC class II molecule and a peptide or a fragment thereof according to any one of [1] to [5].

[18]一種APC,係由如[12]或[13]之方法所誘導。 [18] An APC induced by a method such as [12] or [13].

[19]一種單離的Th1細胞,其辨識在表面上呈現如[1]至[5]中任一項之胜肽或其片段之APC。 [19] An isolated Th1 cell that recognizes APC that presents a peptide or a fragment thereof according to any one of [1] to [5] on the surface.

[20]一種Th1細胞,係由如[14]之方法所誘導。 [20] A Th1 cell induced by the method as described in [14].

[21]如[20]之Th1細胞,其中TCR的α和β次單元分別包含由序列辨識號9和19的胺基酸序列所組成的CDR3。 [21] The Th1 cell according to [20], wherein the α and β subunits of the TCR contain CDR3 composed of the amino acid sequences of sequence identification numbers 9 and 19, respectively.

[22]一種誘導在有須要的對象中對抗癌之免疫反應的方法,該方法包含對於該對象投予包含選自於由以下構成之群組中至少一種有效成分的組合物的步驟:(a)一或多種如[1]至[5]中任一項之胜肽; (b)一或多種如[6]之聚核苷酸;(c)一或多種APC,其在表面上呈現如[1]至[5]中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如[1]至[5]中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合。 [22] A method of inducing an immune response against cancer in a subject in need thereof, the method comprising the step of administering to the subject a composition containing at least one active ingredient selected from the group consisting of: ( a) one or more peptides as in any one of [1] to [5]; (b) one or more polynucleotides as in [6]; (c) one or more APCs which appear on the surface A peptide or a fragment thereof according to any one of [1] to [5]; (d) One or more Th1 cells that recognize a peptide or any of the peptides according to any one of [1] to [5] on a surface or The APC of the fragment thereof; and (e) a combination of any two or more of (a) to (d) above.

[23]一種抗體或其在免疫上有活性的片段,係對抗如[1]至[5]中任一項之胜肽。 [23] An antibody or an immunologically active fragment thereof against a peptide according to any one of [1] to [5].

[24]一種載體,包含編碼為如[1]至[5]中任一項之胜肽的核苷酸序列。 [24] A vector comprising a nucleotide sequence encoded as a peptide according to any one of [1] to [5].

[25]一種宿主細胞,其經過以如[24]之表現載體轉形或轉染。 [25] A host cell that has been transformed or transfected with an expression vector such as [24].

[26]一種診斷套組,包含如[1]至[5]中任一項之胜肽、如[6]之聚核苷酸或如[23]之抗體。 [26] A diagnostic kit comprising a peptide according to any one of [1] to [5], a polynucleotide such as [6] or an antibody such as [23].

[27]一種在個體中評估及/或監測對胜肽專一性的Th1反應的方法,該胜肽包含序列識別號:1或2的胺基酸序列,該方法包括:(a)提供取自經投予胜肽的個體的樣本,其中樣本包含T細胞;(b)偵測在樣本中T細胞的存在,T細胞表現結合於MHC第II類分子與胜肽或其片段之複合體的TCR;及(c)當在(b)中偵測到T細胞的存在時,顯示對胜肽專一性的Th1反應的誘導。 [27] A method of assessing and / or monitoring a Th1 response specific to a peptide in an individual, the peptide comprising an amino acid sequence of sequence identification number: 1 or 2, the method comprising: (a) providing a A sample of an individual administered to a peptide, wherein the sample contains T cells; (b) detection of the presence of T cells in the sample, the T cells exhibiting TCR that binds to a complex of a MHC class II molecule and a peptide or a fragment thereof ; And (c) when the presence of T cells is detected in (b), induction of a peptide-specific Th1 response is shown.

[28]如[27]之方法,其中TCR包括一對特定的α和β次單元,其中每個α和β次單元分別包含由序列識別號:9和19的胺基酸序列組成的CDR3。 [28] The method of [27], wherein the TCR includes a specific pair of α and β subunits, and each of the α and β subunits contains a CDR3 consisting of amino acid sequences of sequence identification numbers: 9 and 19, respectively.

如上述之外,當閱讀下列詳細敘述並結合伴隨之圖式與實施例時,本發明之其他目標或特徵將變得更全然明顯。然而,需要了解的是,本發明之前述發明內容與下列詳細敘述為做為例子之實施例,並不限制本發明或本發明之其他替代實施例。特別是,當以一些特定實施例敘述本發明於此處,可以了解的是,敘述為說明本發明,並不被構築為本發明之限制。熟悉此技藝人 士可想到各種修飾與應用,而不違反本發明之精神與範圍,如附上之申請專利為所描述。同樣地,從此發明內容與下述特定實施例,本發明之其他目標、特徵、優勢與優點為明顯的,且對熟悉此技藝人士而言為無困難地明白無誤。自上述結合伴隨之例子、資料、圖式與由其而來被描寫之所有合理的推論,單獨或考慮此處引入之參考文獻,上述的目標、特徵、優勢與優點為明顯。 As mentioned above, other objects or features of the present invention will become more apparent when reading the following detailed descriptions and the accompanying drawings and embodiments. However, it should be understood that the foregoing summary of the present invention and the following detailed description are examples of embodiments, and do not limit the present invention or other alternative embodiments of the present invention. In particular, when the present invention is described here with some specific embodiments, it can be understood that the description is for the purpose of illustrating the present invention and is not intended to limit the present invention. Those skilled in the art can think of various modifications and applications without violating the spirit and scope of the present invention, as described in the attached application patent. Likewise, from this summary and the specific embodiments described below, other objects, features, advantages, and advantages of the present invention are obvious and will be understood without difficulty by those skilled in the art. The above objectives, features, advantages, and advantages are obvious from the combination of the examples, materials, diagrams, and all reasonable inferences described therefrom, alone or considering the references introduced here.

本發明之各種態樣及應用將會於該技術領域中具有通常知識者在考慮圖式之簡單說明以及本發明之詳細敘述及上述較佳實施例後顯明。 Various aspects and applications of the present invention will become apparent to those having ordinary knowledge in the technical field after considering the simple description of the drawings and the detailed description of the present invention and the above-mentioned preferred embodiments.

[第1-1圖]第1圖顯示MPHOSPH1-衍生和混雜的HLA第II類結合胜肽,其包含由最近發展出的電腦演算法預測的CTL抗原決定位。(A)使用演算法分析人類MPHOSPH1蛋白質的胺基酸序列。水平軸上的數字指的是在MPHOSPH1-衍生的15員胜肽的N端的胺基酸位置。較低的一致性百分比分級指的是對HLA第II類分子的較強結合親和力。(B)合成對複數個HLA第II類對偶(DRB1*09:01、DRB1*04:05和DRB1*15:02)產物具有較低的一致性百分比分級的26員和27員的LP,MPHOSPH1326-351-LP(LP-2)和MPHOSPH1272-298-LP(LP-1)(第1A圖,黑色長條)及由HLA-A24(MPHOSPH1-A24278-286)或-A2(MPHOSPH1-A2282-291)-限制的CTL所辨識的9員胜肽。 [Figure 1-1] Figure 1 shows MPHOSPH1-derived and promiscuous HLA class II binding peptides, which contain CTL epitopes predicted by a recently developed computer algorithm. (A) Analysis of the amino acid sequence of human MPHOSPH1 protein using an algorithm. The number on the horizontal axis refers to the amino acid position at the N-terminus of the MPHOSPH1-derived 15-membered peptide. A lower percent identity rating refers to a stronger binding affinity for HLA class II molecules. (B) Synthesis of multiple HLA type II dual (DRB1 * 09: 01, DRB1 * 04: 05, and DRB1 * 15: 02) products with a low consistency percentage of 26 and 27 LPs, MPHOSPH1 326-351 -LP (LP-2) and MPHOSPH1 272-298 -LP (LP-1) ( FIG. 1A, black bars) and the HLA-A24 (MPHOSPH1-A24 278-286 ) or -A2 (MPHOSPH1- A2 282-291 ) -restricted CTL recognized 9-membered peptide.

[第1-2圖](C)使用演算法分析人類MPHOSPH1蛋白質的胺基酸序列。水平軸上的數字指的是在MPHOSPH1-衍生的15員胜肽的N端的胺基酸位置。較低的一致性百分比分級指的是對HLA第II類分子的較強結合親和力。黑色長條指的是第1B圖所述的LP的位置。 [Figures 1-2] (C) Analysis of the amino acid sequence of human MPHOSPH1 protein using an algorithm. The number on the horizontal axis refers to the amino acid position at the N-terminus of the MPHOSPH1-derived 15-membered peptide. A lower percent identity rating refers to a stronger binding affinity for HLA class II molecules. The black bar indicates the position of the LP shown in Figure 1B.

[第2A圖]第2圖顯示來自健康捐贈者的MPHOSPH1專一性Th細胞的誘導。(A)藉由以MPHOSPH1-LP1刺激,從DR9+健康捐贈者(HD1)產生MPHOSPH1專一 性Th細胞。產生的Th細胞以自體PBMC或經MPHOSPH1-LP1脈衝之L細胞再次刺激。以ELISPOT分析法分析IFN-γ產生Th細胞的數目。顯示從HD1得到有類似結果的至少3次獨立實驗的代表性資料。捐贈者HD1的HLA第II類基因型顯示於分格頂端。畫底線之HLA第II類對偶基因編碼將此胜肽對於Th細胞呈現之HLA第II類分子。藉由以MPHOSPH1-LP1刺激,從健康捐贈者(HD1)產生MPHOSPH1-LP1專一性、經HLA-DR9限制的Th細胞。 [Figure 2A] Figure 2 shows the induction of MPHOSPH1-specific Th cells from healthy donors. (A) MPHOSPH1-specific Th cells are generated from DR9 + healthy donors (HD1) by stimulation with MPHOSPH1-LP1. The Th cells produced were stimulated again with autologous PBMC or L cells pulsed with MPHOSPH1-LP1. The number of Th cells produced by IFN-γ was analyzed by ELISPOT analysis. Representative data showing at least 3 independent experiments with similar results from HD1. The HLA class II genotype of donor HD1 is shown at the top of the bin. The underlined HLA class II dual gene encodes the HLA class II molecule that this peptide presents to Th cells. By stimulation with MPHOSPH1-LP1, MPHOSPH1-LP1 specific, HLA-DR9 restricted Th cells were generated from healthy donors (HD1).

[第2B圖](B)藉由以MPHOSPH1-LP1刺激,從健康捐贈者(HD3)產生MPHOSPH1-LP1專一性及經HLA-DP5限制之Th細胞。 [Figure 2B] (B) MPHOSPH1-LP1 specific and HLA-DP5 restricted Th cells were generated from healthy donors (HD3) by stimulation with MPHOSPH1-LP1.

[第2C圖](C)藉由以MPHOSPH1-LP1刺激,從健康捐贈者(HD4)產生MPHOSPH1-LP1專一性及經HLA-DR4限制之Th細胞。 [Fig. 2C] (C) MPHOSPH1-LP1 specific and HLA-DR4-restricted Th cells were generated from healthy donors (HD4) by stimulation with MPHOSPH1-LP1.

[第2D圖](D)藉由以MPHOSPH1-LP2刺激,從健康捐贈者(HD1)產生MPHOSPH1-LP2專一性及經HLA-DR4限制之Th細胞。 [Fig. 2D] (D) MPHOSPH1-LP2 specific and HLA-DR4-restricted Th cells were generated from healthy donors (HD1) by stimulation with MPHOSPH1-LP2.

[第2E圖](E)藉由以MPHOSPH1-LP2刺激,從健康捐贈者(HD2)產生MPHOSPH1-LP2專一性及經HLA-DP2限制之Th細胞。 [Figure 2E] (E) MPHOSPH1-LP2 specific and HLA-DP2-restricted Th cells were generated from healthy donors (HD2) by stimulation with MPHOSPH1-LP2.

[第2F圖](F)藉由以MPHOSPH1-LP2刺激,從健康捐贈者(HD4)產生MPHOSPH1-LP2專一性及經HLA-DR4限制之Th細胞。 [Fig. 2F] (F) MPHOSPH1-LP2 specific and HLA-DR4-restricted Th cells were generated from healthy donors (HD4) by stimulation with MPHOSPH1-LP2.

[第3圖]第3圖顯示經天然處理及由DC呈現之MPHOSPH1-LP。從捐贈者-HD4建立的經HLA-DR4限制及MPHOSPH1-LP2專一性之Th細胞辨認裝載重組MPHOSPH1蛋白質的自體DC。顯示有類似結果的2次獨立實驗的代表性資料。 [Figure 3] Figure 3 shows MPHOSPH1-LP, which is naturally treated and presented by DC. HLA-DR4 restricted and MPHOSPH1-LP2 specific Th cells established from donor-HD4 identified autologous DCs loaded with recombinant MPHOSPH1 protein. Representative data from 2 independent experiments with similar results are shown.

[第4圖]第4圖顯示MPHOSPH1-LP1於體內(in vivo)誘導有效的CTL交叉起動(cross-priming)。以乳化於IFA中之MPHOSPH1-LP1對HLA-A2或HLA-A24 Tgm實施免疫。在以MPHOSPH1-LP1的第二次免疫疫苗之後,以經MPHOSPH1-A2282-291 SP或HIV-A2 SP(第4A圖)和經MPHOSPH1-A24278-286 SP或HIV-A24 SP(第4B圖)脈衝的BM-DC刺激在鼠蹊部淋巴節的小鼠CD8+ T細胞。藉 由生物體外(ex vivo)ELISPOT分析產生IFN-γ之小鼠CD8+ T細胞的數量。顯示有類似結果的至少3次獨立實驗的代表性資料。 [Figure 4] Figure 4 shows that MPHOSPH1-LP1 induces effective CTL cross-priming in vivo. HLA-A2 or HLA-A24 Tgm was immunized with MPHOSPH1-LP1 emulsified in IFA. After the second immunization vaccine MPHOSPH1-LP1 to by MPHOSPH1-A2 282-291 SP or HIV-A2 SP (Figure 4A) and by MPHOSPH1-A24 278-286 SP or HIV-A24 SP (Figure 4B ) Pulsed BM-DC stimulated mouse CD8 + T cells in the mucosal lymph nodes. The number of CD8 + T cells in mice producing IFN-γ was analyzed by ex vivo ELISPOT. Representative data showing at least 3 independent experiments with similar results.

[第5-1圖]第5圖顯示在MPHOSPH1-LP專一性Th選殖體中的各種Th1型細胞激素的產生。(A-D)以經過或沒有經過同源胜肽脈衝之自體PBMC刺激MPHOSPH1-LP專一性散裝(bulk)Th細胞或Th選殖體。如材料和方法的部分所述,測量於培養上清液中的所指細胞激素的濃度。以三重複分析的平均+/-SD呈現資料。(A)以經過或沒有經過同源胜肽脈衝之自體PBMC刺激MPHOSPH1-LP1專一性Th細胞選殖體。(B)以經過或沒有經過同源胜肽脈衝之自體PBMC刺激MPHOSPH1-LP1專一性散裝Th細胞。 [Fig. 5-1] Fig. 5 shows the production of various Th1-type cytokines in the MP-HOSPH1-LP-specific Th clone. (A-D) MPHOSPH1-LP-specific bulk Th cells or Th colonies were stimulated with autologous PBMCs with or without homologous peptide pulses. The concentration of the indicated cytokines in the culture supernatant was measured as described in the Materials and Methods section. Data are presented as the mean +/- SD of triplicate analysis. (A) MPHOSPH1-LP1 specific Th cell colonies were stimulated with autologous PBMC with or without homologous peptide pulses. (B) MPHOSPH1-LP1 specific bulk Th cells are stimulated with autologous PBMCs with or without homologous peptide pulses.

[第5-2圖](C)以經過或沒有經過同源胜肽脈衝之自體PBMC刺激MPHOSPH1-LP2專一性Th細胞選殖體。(D)以經過或沒有經過同源胜肽脈衝之自體PBMC刺激MPHOSPH1-LP2專一性散裝Th細胞。 [Fig. 5-2] (C) MPHOSPH1-LP2 specific Th cell colonies were stimulated with autologous PBMC with or without homologous peptide pulses. (D) MPHOSPH1-LP2 specific bulk Th cells were stimulated with autologous PBMC with or without homologous peptide pulses.

[第6-1圖]第6圖顯示MPHOSPH1-LP1專一性Th細胞的TCR基因分析結果。(A-B)使用次世代定序儀,藉由TCR-α和-β基因的深cDNA定序,分析MPHOSPH1-LP1專一性T細胞庫(repertoire)。TCR-α顯示在分格頂端,且TCR-β顯示在分格較低端。Y軸指的是以經同源胜肽脈衝之DC刺激Th細胞的次數。在以經過同源胜肽脈衝之經輻射的PBMC對主體Th細胞刺激4次之後,完成MPHOSPH1-LP1專一性散裝Th細胞的選殖。總刺激頻率為9次。X軸指的是前10頻繁的V-J-CDR3序列(細節顯示於右邊方塊)。Z軸指的是個別V-J-CDR3序列的頻率。 [Fig. 6-1] Fig. 6 shows the results of TCR gene analysis of MPHOSPH1-LP1 specific Th cells. (A-B) Analysis of MPHOSPH1-LP1 specific T cell bank (repertoire) by deep cDNA sequencing of TCR-α and -β genes using next-generation sequencer. TCR-α is displayed at the top of the division, and TCR-β is displayed at the lower end of the division. The Y-axis refers to the number of times Th cells were stimulated with DC pulsed with homologous peptides. After stimulating the subject Th cells with irradiated PBMCs pulsed with homologous peptides 4 times, the colonization of MPHOSPH1-LP1 specific bulk Th cells was completed. The total stimulation frequency was 9 times. The X-axis refers to the top 10 frequent V-J-CDR3 sequences (details are shown in the right box). The Z axis refers to the frequency of individual V-J-CDR3 sequences.

[第6-2圖](C)小鼠TCR-陰性T細胞株TG40,其表現單離自MPHOSPH1-LP1專一性T細胞選殖體的全長TCR-α和-β基因,對經過同源胜肽脈衝的表現HLA-DR之L細胞專一性地反應,如CD69和CD137的細胞表面表現所示。 [Fig. 6-2] (C) Mouse TCR-negative T cell line TG40, which expresses the full-length TCR-α and -β genes isolated from MPHOSPH1-LP1 specific T cell clones, The expression of peptide pulses specifically responded to L cells of HLA-DR, as shown by the cell surface manifestations of CD69 and CD137.

[第7圖]第7圖顯示在病患的PBMC中存在MPHOSPH1-LP專一性Th細胞。於 體外(in vitro)以MPHOSPH1-LP1、和MPHOSPH1-LP2加上IL-2及IL-7的混合物對單離自泌尿上皮癌(UC)病患的周邊血液單核細胞(PBMC)進行刺激,且使用ELISPOT評估個別的MPHOSPH1-LP專一性T細胞的頻率。觀察五個UC病患(A至F)中,Th細胞對MPHOSPH1-LP1和MPHOSPH1-LP2的專一性反應。利用對HLA-DR或-DP具有專一性的單株抗體以阻斷分析法(blocking assay)的方式確認HLA第II類限制之MPHOSPH1-LP專一性Th細胞。 [Figure 7] Figure 7 shows the presence of MPHOSPH1-LP-specific Th cells in PBMCs of patients. Peripheral blood mononuclear cells (PBMC) isolated from patients with urinary epithelial cancer (UC) were stimulated in vitro with a mixture of MPHOSPH1-LP1 and MPHOSPH1-LP2 plus IL-2 and IL-7, The frequency of individual MPHOSPH1-LP specific T cells was evaluated using ELISPOT. Observe the specific responses of Th cells to MPHOSPH1-LP1 and MPHOSPH1-LP2 in five UC patients (A to F). HLA class II-restricted MPHOSPH1-LP-specific Th cells were confirmed by a blocking assay using a monoclonal antibody specific for HLA-DR or -DP.

雖然任何類似於或均等於在此所述的方法或材料可用於實施或測試本發明具體例,以下仍敘述較佳的材料、方法及裝置。然而,敘述該材料及方法前,應了解此等敘述僅為供理解而非意欲限制。應了解本發明不限於在此敘述的特定大小、形狀、方向、尺寸、材料、方法學、試驗步驟等,因為此等會由於例行的實驗及/或最適化而改變。再者,在敘述中使用的用語僅係用敘述特定版本或具體例,不意欲限制本發明的範圍,本發明範圍僅由附帶的申請專利範圍限制。 Although any methods or materials similar or equivalent to those described herein can be used in the practice or testing of specific examples of the invention, the preferred materials, methods and devices are described below. However, before describing this material and method, it should be understood that such description is for understanding only and is not intended to be limiting. It should be understood that the invention is not limited to the particular sizes, shapes, directions, dimensions, materials, methodologies, test procedures, etc. described herein, as these may vary due to routine experimentation and / or optimization. In addition, the terms used in the description are only used to describe specific versions or specific examples, and are not intended to limit the scope of the present invention, which is limited only by the scope of the accompanying patent application.

在本說明書中提到的各出版物、專利或專利申請案的揭示係特別完整納入於此作為參考。但是,不理解為承認本發明不早於此揭示或早先的發明。 The disclosures of each publication, patent, or patent application mentioned in this specification are specifically incorporated by reference in their entirety. However, it is not to be construed as an admission that the present invention is not entitled to antedate such disclosure or invention.

I.定義 I. Definition

除非特別指明,在此使用的所有技術及科學用語與本發明所屬技術領域中具有通常知識者一般了解的含意相同。然而,若有抵觸,依本說明書,包括定義為準。 Unless specified otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. However, in the event of conflict, the present specification, including definitions, will control.

除非特別指明,此處使用的單字「一」(“a” or “an”)及「該」意指「至少一」。 Unless specifically stated otherwise, the words "a" ("a" or "an") and "the" means "at least one".

與物質(例如,胜肽、抗體、聚核苷酸等)關連使用的用語「經單離」及「經純化」,係指該物質實質上不含有可能會包括在天然來源的至少一種物質。因此,一經單離或經純化的胜肽係指實質上不含細胞材料例如碳水化合物、脂質或來自該胜肽從其衍生出之細胞或組織來源的其他污染蛋白質,或當係化學合成時實質上不含化學前驅體或其他化學物質。 The terms "isolated" and "purified" used in connection with a substance (eg, peptide, antibody, polynucleotide, etc.) mean that the substance does not substantially contain at least one substance that may be included in natural sources. Thus, an isolated or purified peptide means substantially free of cellular material such as carbohydrates, lipids, or other contaminating proteins from cell or tissue sources from which the peptide is derived, or substantially chemically synthesized when chemically synthesized. Does not contain chemical precursors or other chemicals.

用語「實質上不含細胞材料」,包括製備一胜肽,其中該胜肽係從其單離的細胞的細胞成分單離,或重組產生。因此,實質上不含細胞材料的胜肽,包括多胜肽之製備物其具有少於約30%、20%、10%或5%(以乾重計)的異質蛋白質(在此也稱為「污染蛋白質」)。當該胜肽係以重組產生時,其亦較佳為實質上不含培養基,其包括胜肽之製備物且具有少於約該胜肽製備物的20%、10%、或5%體積的培養基。當該胜肽係以化學合成生產時,較佳為實質上不含化學前驅體或其他化學物質,其包括胜肽之製備物且少於約該胜肽製備物的30%、20%、10%、5%(以乾重計)之涉及合成該胜肽的化學前驅體或其他化學物質。含有經單離的或經純化的胜肽的特定胜肽,例如可藉由將該在蛋白質製備物進行之十二烷基硫酸鈉(SDS)聚丙烯醯胺凝膠電泳與考馬西亮藍(Coomassie Brilliant Blue)染色或類似之膠體後之單一譜帶的出現而顯示。於一較佳具體例,本發明之胜肽及聚核苷酸係經單離的或經純化。 The term "substantially free of cellular material" includes the preparation of a peptide in which the peptide is isolated from the cellular components of the cell in which it is isolated, or is produced recombinantly. Therefore, peptides that are substantially free of cellular material, including preparations of polypeptides, have less than about 30%, 20%, 10%, or 5% (on a dry weight basis) of a heterogeneous protein (also referred to herein as "Contaminated protein"). When the peptide is produced recombinantly, it is also preferably substantially free of culture medium, which includes the preparation of the peptide and has less than about 20%, 10%, or 5% by volume of the peptide preparation. Culture medium. When the peptide is produced by chemical synthesis, it is preferably substantially free of chemical precursors or other chemicals, including preparations of the peptide and less than about 30%, 20%, 10% of the peptide preparation. %, 5% (by dry weight) of chemical precursors or other chemicals involved in the synthesis of the peptide. Specific peptides containing isolated or purified peptides can be obtained, for example, by performing sodium dodecyl sulfate (SDS) polyacrylamide gel electrophoresis on the protein preparation and Coomassie brilliant blue (Coomassie). The appearance of a single band after Brilliant Blue) staining or similar colloids is shown. In a preferred embodiment, the peptides and polynucleotides of the present invention are isolated or purified.

用語「多胜肽」、「胜肽」及「蛋白質」在此係可互換地指胺基酸殘基的聚合物。此用語適用於胺基酸聚合物,於其中一個或更多胺基酸殘基為經修飾的殘基,或非天然發生的殘基,例如對應的天然發生的胺基酸及對應的天然發生的胺基酸聚合物的人造化學擬似物。 The terms "polypeptide", "peptide" and "protein" are used herein interchangeably to refer to polymers of amino acid residues. This term applies to amino acid polymers in which one or more amino acid residues are modified residues, or non-naturally occurring residues, such as the corresponding naturally occurring amino acid and the corresponding naturally occurring amino acid Artificial chemical analogues of amino polymers.

用語「胺基酸」在此意指天然發生的及合成的胺基酸,及胺基酸類似物及與天然發生的胺基酸的作用類似的胺基酸擬似物。天然發生的胺基酸係由遺傳碼編碼者,以及於細胞中轉譯後經過修飾者(例如羥基脯胺酸、γ-羧基 麩胺酸,及O-磷絲胺酸)。用詞「胺基酸類似物」意指與天然發生胺基酸具有相同基本化學結構(鍵結於氫的α-碳、羧基、胺基及R基)但是具有經過修飾的R基或經過修飾的骨架(例如高絲胺酸、正白胺酸、甲硫胺酸、亞碸、甲硫胺酸甲基鋶鹽)。用詞「胺基酸擬似物」意指與一般胺基酸具有不同結構但有類似功能的化學化合物。 The term "amino acid" herein means naturally occurring and synthetic amino acids, and analogs of amino acids and analogs of amino acids analogous to the action of naturally occurring amino acids. Naturally occurring amino acids are encoded by genetic codes and those that have been modified after translation in a cell (eg, hydroxyproline, γ-carboxyglutamic acid, and O -phosphoserine). The term "amino acid analog" means that it has the same basic chemical structure as the naturally occurring amino acid (α-carbon, carboxyl, amine, and R groups bonded to hydrogen) but has a modified R group or a modification (Eg, homoserine, n-leucine, methionine, sulfonium, methionine methyl phosphonium salt). The term "amino acid mimetic" means a chemical compound that has a different structure from a general amino acid but has a similar function.

胺基酸在此可使用其通用的三字母符號或由IUPAC-IUB生化命名協會建議的單字母符號指明。 Amino acids can be indicated here using their common three-letter symbols or the one-letter symbols recommended by the IUPAC-IUB Biochemical Nomenclature Association.

用語「基因」、「聚核苷酸」及「核酸」在此可互換使用,且如無特別指明,係以其通用可接受的單字母碼所指明者。 The terms "gene", "polynucleotide" and "nucleic acid" are used interchangeably herein and, unless otherwise specified, are specified by their universally acceptable one-letter code.

用語「劑」、及「組合物」在此可互換使用,意指以特定量含有特定成分的產品,以及將該特定成分以特定量直接或間接組合得到的任意產品。關於醫藥組合物之此種用語係意欲包含含該有效成分及成為擔體的任意鈍性成分的產品,及由直接或間接組合、複合或聚集該等成分中任意2種或更多而獲得的任意產品,或由該等成分中2種或更多解離而得到的任意產品,或由該等成分中2種或更多的其他類型的反應或交互作用而得到的任意產品。因此本發明之醫藥組合物包括藉由混合本發明化合物及醫藥上或生理上可接受擔體而製作的任意組合物。 The terms "agent" and "composition" are used interchangeably herein, and mean a product containing a specific ingredient in a specific amount, and any product obtained by directly or indirectly combining the specific ingredient in a specific amount. Such a term for a pharmaceutical composition is intended to include a product containing the active ingredient and any inactive ingredient that becomes a carrier, and obtained by directly or indirectly combining, compounding, or aggregating any two or more of these ingredients Any product, or any product obtained by dissociating 2 or more of these ingredients, or any product obtained by 2 or more other types of reactions or interactions in these ingredients. Therefore, the pharmaceutical composition of the present invention includes any composition prepared by mixing the compound of the present invention and a pharmaceutically or physiologically acceptable carrier.

用詞「有效成分」意指在組合物當中有生物學活性或生理活性的物質。尤其,於一醫藥組合物的背景中,「有效成分」係指顯示目標的藥理作用的物質。例如,當醫藥組合物使用在癌症治療或預防時,組合物中的有效成分可直接或間接引導至少一種作用在癌細胞及/或組織的生物學或生理學作用。較佳者,該作用包括減少或抑制癌細胞生長,損害或殺死癌細胞及/或組織等。通常,有效成分的間接作用係誘導MHC第II類分子媒介的免疫反應。在被配製(formulated)前,「有效成分」也稱為「散裝物質(bulk)」、「藥物物質」或「技 術品」。此處使用之用語「醫藥上可接受之擔體」或「生理上可接受之擔體」,係指醫藥上或生理上可接受之材料、組合物、物質、化合物或載體,包括但不限於液體或固體填料、稀釋劑、賦形劑、溶劑或膠囊化材料。 The term "active ingredient" means a substance that is biologically or physiologically active in a composition. In particular, in the context of a pharmaceutical composition, "active ingredient" refers to a substance that exhibits the pharmacological effects of a target. For example, when a pharmaceutical composition is used in the treatment or prevention of cancer, the active ingredients in the composition can directly or indirectly direct at least one biological or physiological effect on cancer cells and / or tissues. Preferably, the effect includes reducing or inhibiting the growth of cancer cells, damaging or killing cancer cells and / or tissues. In general, the indirect action of the active ingredient is to induce an immune response of MHC class II molecular mediators. Prior to being formulated, "active ingredients" are also referred to as "bulks", "drug substances" or "technical products". As used herein, the terms "pharmaceutically acceptable carrier" or "physiologically acceptable carrier" refer to a pharmaceutically or physiologically acceptable material, composition, substance, compound, or carrier, including but not limited to Liquid or solid fillers, diluents, excipients, solvents or encapsulated materials.

除非另外定義,用語「癌症」意指表現MPHOSPH1基因的癌症,例如包括膀胱癌及黑色素瘤(melanoma)。表現MPHOSPH1基因之癌症也被稱作表現MPHOSPH1之癌,或表現編碼MPHOSPH1基因之癌。 Unless otherwise defined, the term "cancer" means a cancer expressing the MPHOSPH1 gene, and includes, for example, bladder cancer and melanoma. Cancers expressing the MPHOSPH1 gene are also referred to as cancers expressing the MPHOSPH1 gene, or cancers expressing the MPHOSPH1 gene.

除非另外定義,用語「T淋巴球」及「T細胞」在此可以互換使用。 Unless otherwise defined, the terms "T-lymphocyte" and "T-cell" are used interchangeably herein.

除非另外定義,用語「細胞毒性T淋巴球」、「細胞毒性T細胞」及「CTL」,在此可互換使用,且除非特別指明,意指T淋巴球的次群組,其能辨識非己細胞(例如腫瘤細胞、受病毒感染的細胞),並誘導此種細胞的死亡。CTL係從CD8+ T淋巴球分化,且能辨識由MHC第I類分子呈現的胜肽。 Unless otherwise defined, the terms "cytotoxic T-lymphocytes", "cytotoxic T-cells" and "CTL" are used interchangeably herein and, unless otherwise specified, means a subgroup of T-lymphocytes that can identify non-self Cells (e.g., tumor cells, virus-infected cells) and induce death of such cells. CTLs are differentiated from CD8 + T lymphocytes and can recognize peptides presented by MHC class I molecules.

除非另外定義,用語「HLA-A24」在此意指包含亞型HLA-A24的型,亞型的例子包括但不限於HLA-A*24:01、HLA-A*24:02、HLA-A*24:03、HLA-A*24:04、HLA-A*24:07、HLA-A*24:08、HLA-A*24:20、HLA-A*24:25及HLA-A*24:88。 Unless otherwise defined, the term "HLA-A24" herein means a type comprising the subtype HLA-A24. Examples of the subtype include but are not limited to HLA-A * 24: 01, HLA-A * 24: 02, HLA-A * 24: 03, HLA-A * 24: 04, HLA-A * 24: 07, HLA-A * 24: 08, HLA-A * 24: 20, HLA-A * 24: 25, and HLA-A * 24 : 88.

除非另外定義,用語「HLA-A2」在此代表性意指亞型,亞型的例子包括但不限於HLA-A*02:01、HLA-A*02:02、HLA-A*02:03、HLA-A*02:04、HLA-A*02:05、HLA-A*02:06、HLA-A*02:07、HLA-A*02:10、HLA-A*02:11、HLA-A*02:13、HLA-A*02:16、HLA-A*02:18、HLA-A*02:19、HLA-A*02:28及HLA-A*02:50。 Unless otherwise defined, the term "HLA-A2" here means representatively a subtype, examples of which include but are not limited to HLA-A * 02: 01, HLA-A * 02: 02, HLA-A * 02: 03 HLA-A * 02: 04, HLA-A * 02: 05, HLA-A * 02: 06, HLA-A * 02: 07, HLA-A * 02: 10, HLA-A * 02: 11, HLA -A * 02: 13, HLA-A * 02: 16, HLA-A * 02: 18, HLA-A * 02: 19, HLA-A * 02: 28, and HLA-A * 02: 50.

除非另外定義,用語「T輔助1型細胞」及「Th1細胞」,在此係可互換使用,且除非特別指明,係指能夠辨識由MHC第II類分子呈現的胜肽且關連於細胞免疫的CD4+ T淋巴球次群組。除非另有定義,用語「Th細胞」、「CD4+ T細胞」及「CD4+輔助T細胞」,在此亦可互換使用。Th1細胞分泌多種細胞素(例如IFN-γ、IL-2、TNF-β、GM-CSF、TNF-α等)來幫忙活化及/或刺激其他關於細胞免疫的免疫細胞(例如CTL、巨噬體)。 Unless otherwise defined, the terms "T helper type 1 cells" and "Th1 cells" are used interchangeably herein, and unless otherwise specified, refer to those capable of recognizing peptides presented by MHC class II molecules and related to cellular immunity CD4 + T lymphocytic subgroup. Unless otherwise defined, the terms "Th cell", "CD4 + T cell" and "CD4 + helper T cell" are also used interchangeably herein. Th1 cells secrete a variety of cytokines (e.g., IFN-γ, IL-2, TNF-β, GM-CSF, TNF-α, etc.) to help activate and / or stimulate other immune cells (such as CTL, macrophages) related to cellular immunity ).

除非另有定義,用語「HLA-DP2」係指亞型,其例子包括但不限於HLA-DPB1*02:01及HLA-DPB1*02:02。 Unless otherwise defined, the term "HLA-DP2" refers to a subtype, examples of which include, but are not limited to, HLA-DPB1 * 02: 01 and HLA-DPB1 * 02: 02.

除非另有定義,用語「HLA-DP5」係指亞型,其例子包括但不限於HLA-DPB1*05:01。 Unless otherwise defined, the term "HLA-DP5" refers to a subtype, examples of which include, but are not limited to, HLA-DPB1 * 05: 01.

除非另有定義,用語「HLA-DR4」係指亞型,其例子包括但不限於HLA-DRB1*04:01、HLA-DRB1*04:02、HLA-DRB1*04:03、HLA-DRB1*04:04、HLA-DRB1*04:05、HLA-DRB1*04:06、HLA-DRB1*04:07、HLA-DRB1*04:08、HLA-DRB1*04:09、HLA-DRB1*04:10及HLA-DRB1*04:11。 Unless otherwise defined, the term "HLA-DR4" refers to a subtype, examples of which include, but are not limited to, HLA-DRB1 * 04: 01, HLA-DRB1 * 04: 02, HLA-DRB1 * 04: 03, HLA-DRB1 * 04:04, HLA-DRB1 * 04: 05, HLA-DRB1 * 04: 06, HLA-DRB1 * 04: 07, HLA-DRB1 * 04: 08, HLA-DRB1 * 04: 09, HLA-DRB1 * 04: 10 and HLA-DRB1 * 04: 11.

除非另有定義,用語「HLA-DR9」係指亞型,其例子包括但不限於HLA-DRB1*09:01、HLA-DRB1*09:02、HLA-DRB1*09:03、HLA-DRB1*09:04、HLA-DRB1*09:05、HLA-DRB1*09:06、HLA-DRB1*09:07、HLA-DRB1*09:08及HLA-DRB1*09:09。 Unless otherwise defined, the term "HLA-DR9" refers to a subtype, examples of which include, but are not limited to, HLA-DRB1 * 09: 01, HLA-DRB1 * 09: 02, HLA-DRB1 * 09: 03, HLA-DRB1 * 09:04, HLA-DRB1 * 09: 05, HLA-DRB1 * 09: 06, HLA-DRB1 * 09: 07, HLA-DRB1 * 09: 08, and HLA-DRB1 * 09: 09.

除非另有定義,詞語「經由MHC第II類分子媒介的免疫反應」,係指由於MHC第II類分子呈現胜肽所誘導之免疫反應。在此「由MHC第II類抗原媒介之免疫反應」,包括由CD4+ T細胞,特別是Th1細胞誘導的免疫反應。此種免疫反應的例子包括但不限於生產細胞素(例如IFN-γ、IL-2、TNF-β、GM-CSF、TNF-α等),及活化及/或刺激其他免疫細胞(例如CTL、巨噬體等)。 Unless otherwise defined, the term "immune response via MHC class II molecular mediator" refers to the immune response induced by MHC class II molecules exhibiting peptides. "Immune response by MHC class II antigens" includes immune response induced by CD4 + T cells, especially Th1 cells. Examples of such immune responses include, but are not limited to, cytokine production (e.g., IFN-γ, IL-2, TNF-β, GM-CSF, TNF-α, etc.), and activation and / or stimulation of other immune cells (e.g., CTL, Macrophages, etc.).

除非另有定義,詞語「專一於MPHOSPH1之Th1細胞」,係指由呈現衍生自MPHOSPH1之胜肽的APC所專一性活化,而不被其他APC活化的Th1細胞。 Unless otherwise defined, the term "Th1 cells specific to MPHOSPH1" refers to Th1 cells specifically activated by APCs presenting peptides derived from MPHOSPH1, but not activated by other APCs.

除非另有定義,詞語「MPHOSPH1-專一性CTL」,係指對抗表現MPHOSPH1之目標細胞專一性顯示細胞毒殺性的CTL。除非另有定義,當使用在胜肽上下文,詞語「CTL誘導能力」,係指一胜肽當被呈現於APC上時,誘導CTL的能力。除非另有定義,在此使用之用語「套組」,係參照試劑及其他材料的組合來使用。在此考慮到此套組可包括微陣列、晶片、標記等。此用語「套組」不意欲限制在特定的試劑及/或材料的組合。 Unless otherwise defined, the term "MPHOSPH1-specific CTL" refers to a CTL that specifically exhibits cytotoxicity against a target cell expressing MPHOSPH1. Unless otherwise defined, when used in the context of peptides, the term "CTL-inducing ability" refers to the ability of a peptide to induce CTL when presented on an APC. Unless otherwise defined, the term "set" as used herein refers to a combination of reagents and other materials. It is contemplated herein that this set may include microarrays, wafers, tags, and the like. The term "kit" is not intended to be limited to a particular combination of reagents and / or materials.

本發明上下文中,用語「抗體」意指專一性地對於指定蛋白質或其胜肽反應的免疫球蛋白及其片段。抗體的例子可包括人類抗體、靈長源抗體、嵌合抗體、雙專一抗體、人類化抗體、融合於其他蛋白質或放射性標記的抗體,及抗體片段。再者,抗體在此係以最廣的含意使用,且具體而言含蓋完整無缺的單株抗體、多株抗體、多專一性抗體(例如雙專一性抗體),及抗體片段,該抗體片段只要能顯現所望的生物學活性即可。「抗體」代表所有類型者(例如IgA、IgD、IgE、IgG及IgM)。 In the context of the present invention, the term "antibody" means an immunoglobulin and fragments thereof that specifically respond to a given protein or its peptide. Examples of antibodies may include human antibodies, primate antibodies, chimeric antibodies, bispecific antibodies, humanized antibodies, antibodies fused to other proteins or radiolabeled antibodies, and antibody fragments. Furthermore, antibodies are used here in the broadest sense, and specifically include intact monoclonal antibodies, polyclonal antibodies, multispecific antibodies (such as bispecific antibodies), and antibody fragments, the antibody fragments As long as the desired biological activity can be exhibited. "Antibody" stands for all types (eg IgA, IgD, IgE, IgG and IgM).

除非另外定義,在此使用的所有技術及科學用語與本發明所屬技術領域中具有通常知識者一般了解的含意相同。 Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs.

II.胜肽 II. Peptide

以下詳述之本發明之胜肽,可指稱為「MPHOSPH1胜肽」或「MPHOSPH1多胜肽」。 The peptide of the present invention described in detail below may be referred to as "MPHOSPH1 peptide" or "MPHOSPH1 polypeptide".

為了證明衍生自MPHOSPH1之胜肽作用如一被Th1細胞所辨認之抗原,分析衍生自MPHOSPH1之胜肽(序列識別號:6或8)以確定是否其為由一MHC第II類分子混雜地限制之抗原決定位。衍生自MPHOSPH1之混雜的MHC第II類結合胜肽的候選物,基於其對HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9之結合親和力確認。在藉由載有這些胜肽之樹突細胞(dendritic cell,DC)以體外刺激CD4+ T細胞後,使用下列各個胜肽成功建立Th1細胞:MPHOSPH1272-298/ WVSFFEIYNEYIYDLFVPVSSKFQKRK(序列識別號:1)及MPHOSPH1326-351/AYRLLKLGIKHQSVAFTKLNNASSRS(序列識別號:2)。 To demonstrate that the peptide derived from MPHOSPH1 functions as an antigen recognized by Th1 cells, the peptide derived from MPHOSPH1 (sequence identification number: 6 or 8) was analyzed to determine whether it was confined by an MHC class II molecule Epitope. Candidates of hybrid MHC class II binding peptides derived from MPHOSPH1 were confirmed based on their binding affinities to HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9. After stimulating CD4 + T cells in vitro by dendritic cells (DC) loaded with these peptides, Th1 cells were successfully established using each of the following peptides: MPHOSPH1 272-298 / WVSFFEIYNEYIYDLFVPVSSKFQKRK (sequence identification number: 1) And MPHOSPH1 326-351 / AYRLLKLGIKHQSVAFTKLNNASSRS (serial identification number: 2).

此等上述提及的已建立的Th1細胞,顯示回應於經各別的胜肽脈衝之APC的刺激,顯示強的專一性的Th1細胞活性。再者,上述胜肽可以刺激由數種日本群體常見的HLA-DR及HLA-DP分子(例如HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9)限制的Th1細胞。此等結果證明MPHOSPH1係由Th1細胞辨識的抗原,且此胜肽係受數種HLA-第II類分子(例如HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9)混雜地限制的MPHOSPH1的抗原決定位胜肽。 These above-mentioned established Th1 cells have shown strong specific Th1 cell activity in response to stimulation of APC by individual peptide pulses. Furthermore, the above peptides can stimulate Th1 cells restricted by HLA-DR and HLA-DP molecules (eg, HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9) common in several Japanese populations. These results demonstrate that MPHOSPH1 is an antigen recognized by Th1 cells, and that the peptide line is confined by several HLA-type II molecules (such as HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9). Of the epitope.

上述鑑別的一些胜肽更包括一CTL抗原決定位之胺基酸序列,其有誘導專一於MPHOSPH1之CTL的能力,且如同此處證明,此胜肽可誘導專一於MPHOSPH1之CTL及Th1細胞。因此此等胜肽作可用於誘導對抗表現MPHOSPH1之癌的免疫反應之適合的胜肽。因為MPHOSPH1基因在大多數癌組織係過度表現,包括例如HCC及黑色素瘤,代表其係免疫療法的一個良好標的。 Some of the peptides identified above include a CTL epitope amino acid sequence that has the ability to induce CTL specific to MPHOSPH1, and as demonstrated herein, this peptide can induce CTL and Th1 cells specific to MPHOSPH1. These peptides are therefore suitable peptides that can be used to induce an immune response against cancers expressing MPHOSPH1. Because the MPHOSPH1 gene is overexpressed in most cancer tissue lines, including, for example, HCC and melanoma, it represents a good target for its line of immunotherapy.

因此本發明提供有誘導專一於MPHOSPH1之Th1細胞之能力的胜肽。本發明之胜肽可結合於至少一MHC第II類分子,並被呈現在APC上。或本發明之胜肽之片段可結合於至少一MHC第II類分子,並被呈現在APC上。此胜肽之片段,可藉由在APC處理而產生。於較佳具體例,本發明之胜肽或其片段有能力結合於2或更多種MHC第II類分子(例如HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9)。換言之,本發明之胜肽有能力誘導受2或更多種MHC第II類分子限制之Th1細胞。於另一具體例,本發明之胜肽包括有MPHOSPH1-專一性CTL誘導能力之胜肽之胺基酸序列。此種具MPHOSPH1-專一性CTL誘導能力的胜肽的典型例,包括有序列識別號:3或4之胺基酸序列的胜肽。 Therefore, the present invention provides a peptide having the ability to induce Th1 cells specific to MPHOSPH1. The peptide of the present invention can bind to at least one MHC class II molecule and be presented on APC. Or a fragment of the peptide of the present invention can be bound to at least one MHC class II molecule and presented on APC. The peptide fragment can be generated by APC treatment. In a preferred embodiment, the peptide or fragment thereof of the present invention is capable of binding to two or more MHC class II molecules (eg, HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9). In other words, the peptide of the present invention is capable of inducing Th1 cells restricted by 2 or more MHC class II molecules. In another specific example, the peptide of the present invention includes an amino acid sequence of a peptide having MPHOSPH1-specific CTL inducing ability. Typical examples of such peptides with MPHOSPH1-specific CTL inducing ability include peptides with amino acid sequences of sequence identification number: 3 or 4.

由於MHC第II類分子中之結合溝係在兩端開放,所以可容MHC第II類結合胜肽於長度有靈活性。MHC第II類分子的核心模體由9個胺基酸殘基 組成,且MHC第II類結合胜肽一般在此核心結合模體的側面有其他的胺基酸殘基。側面胺基酸殘基之數目不限。因此,並非序列識別號1或2之所有胺基酸殘基對結合於MHC第II類分子為必要。因此本發明之胜肽可為有能力誘導Th1細胞之胜肽,此種胜肽包括選自於由以下構成之群組之胺基酸序列:(a)一連續的胺基酸序列,其具有選自於序列識別號:1或2之胺基酸序列中的長於9個胺基酸;及(b)如(a)之胺基酸序列,其中胺基酸序列有1個、2個或數個胺基酸係經取代、刪除、插入及/或附加。 Since the binding grooves in the MHC class II molecules are open at both ends, the MHC class II binding peptides can be flexible in length. The core motif of the MHC class II molecule is composed of 9 amino acid residues, and the MHC class II binding peptide generally has other amino acid residues on the side of this core binding motif. The number of flanking amino acid residues is not limited. Therefore, not all amino acid residues of sequence identification numbers 1 or 2 are necessary for binding to MHC class II molecules. Therefore, the peptide of the present invention may be a peptide capable of inducing Th1 cells. Such a peptide includes an amino acid sequence selected from the group consisting of: (a) a continuous amino acid sequence having Longer than 9 amino acids selected from the amino acid sequence of the sequence identification number: 1 or 2; and (b) the amino acid sequence of (a), wherein the amino acid sequence has 1, 2 or Several amino acids are substituted, deleted, inserted, and / or added.

MHC第II類結合胜肽通常為10-30個胺基酸。當序列識別號:1至2之胺基酸序列係由MPHOSPH1(序列識別號:6或8)之部分胺基酸序列構成,本發明之胜肽可為以下[1]至[5]之胜肽: MHC class II binding peptides typically have 10-30 amino acids. When the amino acid sequence of the sequence identification number: 1 to 2 is composed of a part of the amino acid sequence of MPHOSPH1 (sequence identification number: 6 or 8), the peptide of the present invention may be the following [1] to [5] Peptide:

[1]一種單離的胜肽,其長度為10-30個胺基酸且包含序列識別號:6或8的一部分胺基酸序列,其中該胜肽包含選自由以下構成之群組的胺基酸序列:(a)一連續的胺基酸序列,其具有選自於序列識別號:1或2之胺基酸序列中的長於9個胺基酸;及(b)一胺基酸序列,其中(a)之胺基酸序列有1個、2個或數個胺基酸係經取代、刪除、插入及/或附加,該胜肽有誘導T輔助1型(Th1)細胞的能力。 [1] An isolated peptide having a length of 10-30 amino acids and comprising a part of the amino acid sequence of the sequence identification number: 6 or 8, wherein the peptide includes an amine selected from the group consisting of Amino acid sequence: (a) a continuous amino acid sequence having more than 9 amino acids selected from the amino acid sequence of sequence identification number: 1 or 2; and (b) a monoamino acid sequence In which, the amino acid sequence of (a) has 1, 2, or several amino acids are substituted, deleted, inserted, and / or added, and the peptide has the ability to induce T helper type 1 (Th1) cells.

[2]如[1]之單離的胜肽,其中,該胜肽或其片段有結合於至少2種MHC第II類分子的能力。 [2] The isolated peptide of [1], wherein the peptide or a fragment thereof has the ability to bind to at least two MHC class II molecules.

[3]如[2]之單離的胜肽,其中,該MHC第II類分子選自於由HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9構成之群組。 [3] The isolated peptide of [2], wherein the MHC class II molecule is selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9.

[4]如[1]至[3]中任一項之單離的胜肽,其中,該胜肽包含具有MPHOSPH1-專一性CTL誘導能力之胜肽的胺基酸序列。 [4] The isolated peptide according to any one of [1] to [3], wherein the peptide comprises an amino acid sequence of a peptide having MPHOSPH1-specific CTL inducing ability.

[5]如[4]之單離的胜肽,其中,該胜肽包含選自由以下構成之群組的胺基酸 序列:(a)一胺基酸序列,其選自於序列識別號:1至2構成之群組;及(b)一胺基酸序列,其中(a)之胺基酸序列有1個、2個或數個胺基酸係經取代、刪除、插入及/或附加。 [5] The isolated peptide of [4], wherein the peptide comprises an amino acid sequence selected from the group consisting of: (a) a monoamino acid sequence selected from a sequence identification number: A group of 1 to 2; and (b) an amino acid sequence, wherein (a) the amino acid sequence has one, two, or several amino acids which are substituted, deleted, inserted, and / or appended .

本發明之胜肽誘導之Th1細胞對於MPHOSPH1係專一。因此於一些具體例,本發明提供長度少於30個胺基酸之胜肽,其由序列識別號:6或8的胺基酸序列的一部分胺基酸序列所構成,其中該胜肽包含序列識別號1或2之胺基酸序列。 The peptide-induced Th1 cells of the present invention are specific to MPHOSPH1 line. Therefore, in some specific examples, the present invention provides a peptide having an amino acid length of less than 30, which is composed of a part of the amino acid sequence of the amino acid sequence of sequence identification number: 6 or 8, wherein the peptide includes a sequence The amino acid sequence of identification number 1 or 2.

一般而言,現在例如在網際網路上已有軟體程式例如Wang P,et al.2008.PLoS Comput Biol。4(4):e1000048.11:568;及Wang,P et al.2010.BMC Bioinformatics所述者可用於以電腦模擬計算各種胜肽與HLA抗原的結合親和性。與HLA抗原的結合親和性可例如以於例如Nielsen M and Lund O.2009.BMC Bioinformatics.10:296;Nielsen M,et al.2007.BMC Bioinformatics.8:238;Bui HH,et al.2005.Immunogenetics.57:304-14;Sturniolo T,et al.1999.Nat Biotechnol.17(6):555-61 and Nielsen M,et al.2008.PLoS Comput Biol.4(7)e1000107敘述者測量。因此本發明包含MPHOSPH1的胜肽片段,其係以此種已知程式預測會與鑑別的HLA抗原結合。 In general, software programs such as Wang P, et al. 2008. PLoS Comput Biol are now available on the Internet, for example. 4 (4): e1000048.11: 568; and those described by Wang, P et al. 2010. BMC Bioinformatics can be used to calculate the binding affinity of various peptides to HLA antigens by computer simulation. The binding affinity to the HLA antigen can be, for example, Nielsen M and Lund O. 2009. BMC Bioinformatics. 10: 296; Nielsen M, et al. 2007. BMC Bioinformatics. 8: 238; Bui HH, et al. 2005. Immunogenetics. 57: 304-14; Sturniolo T, et al. 1999. Nat Biotechnol. 17 (6): 555-61 and Nielsen M, et al. 2008. PLoS Comput Biol. 4 (7) e1000107 narrator measurement. Therefore, the present invention includes a peptide fragment of MPHOSPH1, which is predicted to bind to the identified HLA antigen using this known formula.

如上述,MHC第II類結合胜肽在其長度有靈活性,序列識別號1或2之胺基酸序列可選擇性地有額外的胺基酸殘基位在側面,條件是獲得之胜肽保留必要的Th1細胞誘導能力即可。此種有Th1細胞誘導能力的胜肽一般少約於30個胺基酸,常少於約29個胺基酸,經常少於約28或27個胺基酸。位在選自序列識別號:1至2中之胺基酸序列側面的胺基酸序列,不特別限制,且可包括任意種類胺基酸,條件是只要此側面胺基酸序列不要減弱原始胜肽之Th1細胞誘導能力即可。於典型的具體例,此種側面胺基酸序列可選自於鄰近於序列識別號: 1或2之胺基酸序列的序列識別號:6或8之胺基酸序列;但本發明不限於此。如上,本發明也包括有Th1細胞誘導能力的胜肽,及選自序列識別號:1至2之胺基酸序列。 As mentioned above, the MHC class II binding peptide has flexibility in its length, and the amino acid sequence of sequence identification number 1 or 2 may optionally have additional amino acid residues on the side, provided that the obtained peptide is Retain the necessary Th1 cell induction capacity. Such peptides capable of inducing Th1 cells are generally less than about 30 amino acids, often less than about 29 amino acids, and often less than about 28 or 27 amino acids. The amino acid sequence located on the side of the amino acid sequence selected from the sequence identification numbers: 1 to 2 is not particularly limited and may include any kind of amino acid, provided that the amino acid sequence on this side does not weaken the original victory The Th1 cell inducing ability of the peptide is sufficient. In typical specific examples, such a side amino acid sequence may be selected from an amino acid sequence adjacent to the sequence identification number: 1 or 2 of the amino acid sequence: 6 or 8; however, the present invention is not limited to this. this. As described above, the present invention also includes a peptide capable of inducing Th1 cells, and an amino acid sequence selected from sequence identification numbers: 1 to 2.

另一方面,由於MHC第II類分子之核心結合模體由9個胺基酸殘基組成,所以序列識別號:1或2之胺基酸序列全長對於結合於MHC第II類分子及誘導Th1細胞並非為必要。因此,本發明胜肽之形式可為有超過來自序列識別號1或2之胺基酸序列之9個連續胺基酸的胜肽,前提是此胜肽保留必要的Th1細胞誘導能力。有Th1細胞誘導能力之胜肽,一般長於約10個胺基酸,時常超過11或12個胺基酸,經常長於13或14個胺基酸。因此本發明之胜肽可為有Th1細胞誘導能力之胜肽,且為有來自序列識別號:1或2之胺基酸序列之長於9、10、11、12、13或14個連續胺基酸之胺基酸序列。 On the other hand, because the core binding motif of MHC class II molecules consists of 9 amino acid residues, the full length of the amino acid sequence of sequence identification number: 1 or 2 is for binding to MHC class II molecules and inducing Th1 Cells are not necessary. Therefore, the peptide of the present invention may be in the form of a peptide having more than 9 consecutive amino acids from the amino acid sequence of sequence identification number 1 or 2, provided that the peptide retains the necessary Th1 cell inducing ability. The peptides capable of inducing Th1 cells are generally longer than about 10 amino acids, often more than 11 or 12 amino acids, and often longer than 13 or 14 amino acids. Therefore, the peptide of the present invention can be a peptide capable of inducing Th1 cells, and has an amino acid sequence from the sequence identification number: 1 or 2 which is longer than 9, 10, 11, 12, 13, or 14 consecutive amino groups. Amino acid sequences of acids.

一般而言,已知在蛋白質中修飾一個或更多胺基酸不會影響該蛋白質的功能,或有時甚至會增強原始蛋白質的所望功能。事實上,經修飾的胜肽(即,相較於原始參考序列,由在其中一、二或數個胺基酸殘基已被修飾(即,取代、刪除、插入或加成)之胺酸序列所構成的胜肽)已知會保留原始胜肽的生物學活性(Mark,et al.,Proc Natl Acad Sci USA 1984,81:5662-6;Zoller and Smith,Nucleic Acids Res 1982,10:6487-500;Dalbadie-McFarland et al.,Proc Natl Acad Sci USA 1982,79:6409-13)。因此,於本發明一具體例中,本發明之胜肽可具有Th1細胞誘導能力與其中一、二或更多胺基酸經加成、插入、刪除及/或取代之選自序列識別號:1至2中的胺基酸序列兩者。或者,本發明之胜肽可具有Th1細胞誘導能力,及具有一胺基酸序列於其中一、二或更多胺基酸加成、插入、刪除及/或取代於序列識別號:1或2中。亦即,在一些具體例中,本發明的胜肽可具有Th1細胞誘導能力及一胺基酸序列,於其中對胺基酸序列識別號:1或2中進行一、二或選自於下列所構成之族群:加成、插入、刪除及取代之數個修飾。 In general, it is known that modifying one or more amino acids in a protein does not affect the function of the protein, or sometimes even enhances the desired function of the original protein. In fact, modified peptides (i.e., amino acids in which one, two, or several amino acid residues have been modified (i.e., substituted, deleted, inserted, or added) compared to the original reference sequence The peptides formed by the sequence) are known to retain the biological activity of the original peptides (Mark, et al., Proc Natl Acad Sci USA 1984, 81: 5662-6; Zoller and Smith, Nucleic Acids Res 1982, 10: 6487- 500; Dalbadie-McFarland et al., Proc Natl Acad Sci USA 1982, 79: 6409-13). Therefore, in a specific example of the present invention, the peptide of the present invention may have the ability to induce Th1 cells and one, two or more amino acids are added, inserted, deleted, and / or substituted from the sequence identification number: Both the amino acid sequences in 1 to 2. Alternatively, the peptide of the present invention may have the ability to induce Th1 cells, and have a monoamino acid sequence in which one, two, or more amino acid additions, insertions, deletions, and / or substitutions are made in the sequence identification number: 1 or 2 in. That is, in some specific examples, the peptides of the present invention may have the ability to induce Th1 cells and a monoamino acid sequence, in which the amino acid sequence identification number: 1 or 2 is performed one or two or is selected from the following Formation of the group: several modifications of additions, insertions, deletions and substitutions.

熟悉此技藝人士會認定改變單一胺基酸或一小百分比之胺基酸之對於一胺基酸序列的個別的添加或取代傾向產生保存原始胺基酸支鏈的特性。因此它們常被意指為「保守取代(conservative substitutions)」或「保守修飾(conservative modifications)」,其中一蛋白質之改變導致對原始蛋白質而言一具有功能相似的蛋白質。提供功能相似胺基酸之保守取代表已為本技術領域所熟知。胺基酸支鏈的特徵的例子為疏水胺基酸(A,I,L,M,F,P,W,Y,V)、親水胺基酸(R,D,N,C,E,Q,G,H,K,S,T)與具有下列共同官能基或特徵之支鏈:一脂肪族支鏈(G,A,V,L,I,P);一含羥基支鏈(S,T,Y);含硫原子支鏈(C,M);含羧酸與胺基支鏈(D,N,E,Q);含鹼支鏈(R,K,H);以及含芳香族支鏈(H,F,Y,W)。此外,下列八個群體各包含為彼此保守取代之胺基酸:1)丙胺酸(A)、甘胺酸(G);2)天門冬胺酸(D)、麩胺酸(E);3)天門冬醯胺酸(N)、麩醯胺酸(Q);4)精胺酸(R)、離胺酸(K);5)異白胺酸(I)、白胺酸(L)、甲硫胺酸(M)、纈胺酸(V);6)苯丙胺酸(F)、酪胺酸(Y)、色胺酸(W);7)絲胺酸(S)、蘇胺酸(T);以及8)半胱胺酸(C)、甲硫胺酸(M)(參見,例如Creighton,Proteins 1984)。 Those skilled in the art will recognize that the tendency of individual amino acids to be added or substituted by changing a single amino acid or a small percentage of amino acids results in the preservation of the original amino acid branch chain. Therefore they are often referred to as "conservative substitutions" or "conservative modifications", in which a change in a protein results in a protein with a similar function to the original protein. Conservative substitution tables providing functionally similar amino acids are well known in the art. Examples of characteristics of amino acid branches are hydrophobic amino acids (A, I, L, M, F, P, W, Y, V), hydrophilic amino acids (R, D, N, C, E, Q) , G, H, K, S, T) and branches with the following common functional groups or characteristics: an aliphatic branch (G, A, V, L, I, P); a hydroxyl-containing branch (S, T, Y); sulfur atom-containing branch (C, M); carboxylic acid and amine branch (D, N, E, Q); alkali branch (R, K, H); and aromatic Branches (H, F, Y, W). In addition, the following eight groups each contain amino acids that are conservatively substituted with each other: 1) alanine (A), glycine (G); 2) aspartic acid (D), glutamic acid (E); 3 ) Aspartic acid (N), glutamic acid (Q); 4) Arginine (R), lysine (K); 5) Isoleucine (I), leucine (L) , Methionine (M), valine (V); 6) phenylalanine (F), tyrosine (Y), tryptophan (W); 7) serine (S), threonine (T); and 8) cysteine (C), methionine (M) (see, for example, Creighton, Proteins 1984).

此種經保守修飾胜肽也被視為本發明之胜肽。然而,本發明之胜肽並不限於此,且可包括非保守修飾,只要經修飾之胜肽維持原始胜肽的Th1細胞誘導能力。更進一步而言,經修飾之胜肽不排除多形變體(polymorphic variants)、種間同質體(interspecies homologues)與MPHOSPH1對偶基因(alleles)可誘導Th1細胞的胜肽。 Such conservatively modified peptides are also considered to be peptides of the present invention. However, the peptide of the present invention is not limited thereto, and may include non-conservative modifications as long as the modified peptide maintains the Th1 cell-inducing ability of the original peptide. Furthermore, modified peptides do not exclude polymorphic variants, interspecies homologues and MPHOSPH1 alleles, which can induce peptides in Th1 cells.

為了維持Th1細胞誘導能力,可修飾(插入、加入、刪除/或取代) 一小數目(例如一、二或數個)或小百分比之胺基酸。此處用語「數個」指5或更少個胺基酸,例如4個或3個或更少。被修飾之胺基酸之百分比可為,較佳20%或更少,更較佳為,15%或更少,甚至更佳為為,10%或8%,少或1至5%。 In order to maintain the Th1 cell-inducing ability, a small number (eg, one, two, or several) or a small percentage of amino acids can be modified (inserted, added, deleted, or substituted). The term "several" here means 5 or less amino acids, such as 4 or 3 or less. The percentage of the modified amino acid may be, preferably 20% or less, more preferably 15% or less, even more preferably 10% or 8%, less or 1 to 5%.

本發明之較佳胜肽,即序列識別號:1至2(MPHOSPH1272-298-LP、MPHOSPH1326-351-LP)之同源性分析結果確認此等胜肽與其他任何已知人類基因產物所衍生的胜肽不具顯著同源性。所以,當使用於免疫療法時,可顯著降低這些胜肽產生未知或不欲的免疫反應的可能性。因此,此等胜肽被預期對於在癌症病患中誘出對抗MPHOSPH1的免疫性高度有用。 The preferred peptides of the present invention, that is, sequence identification numbers: 1 to 2 (MPHOSPH1 272-298- LP , MPHOSPH1 326-351-LP ), the homology analysis results confirm that these peptides and any other known human gene products The derived peptides do not have significant homology. Therefore, when used in immunotherapy, the potential for these peptides to produce an unknown or unwanted immune response can be significantly reduced. Therefore, these peptides are expected to be highly useful for eliciting immunity against MPHOSPH1 in cancer patients.

當使用於免疫療法之背景中,本發明之胜肽或其片段應呈現在APC的表面,較佳為以與HLA第II類抗原之複合體的形式呈現。因此宜選擇不僅會誘導Th1細胞,而且對於HLA第II類抗原擁有高結合親和性的胜肽。為此,可將胜肽利用取代、插入、刪除及/或加成胺基酸殘基進行修飾,以產生結合親和性有所改善的修飾胜肽。 When used in the context of immunotherapy, the peptides or fragments thereof of the present invention should be presented on the surface of APC, preferably in the form of a complex with HLA class II antigen. Therefore, it is advisable to choose peptides that not only induce Th1 cells, but also have high binding affinity for HLA class II antigens. To this end, the peptide can be modified with substitutions, insertions, deletions and / or additions of amino acid residues to produce modified peptides with improved binding affinity.

本發明也考量附加一、二或數個胺基酸到該胜肽的N及C端之一或兩者。此種經修飾的具有高度HLA抗原結合親和性的胜肽並保留Th1細胞誘導能力者,也包括於本發明。 The invention also contemplates the addition of one, two, or several amino acids to one or both of the N and C termini of the peptide. Such modified peptides having high HLA antigen-binding affinity and retaining Th1 cell-inducing ability are also included in the present invention.

例如本發明提供長度短於31、30、29、28、27或26個胺基酸的單離的胜肽,其結合於HLA第II類抗原且具有Th1細胞誘導能力,且包含選自於序列識別號:1至2構成的群組中的胺基酸序列中有1、2或數個胺基酸經修飾的胺基酸序列。 For example, the present invention provides isolated peptides shorter than 31, 30, 29, 28, 27, or 26 amino acids, which bind to HLA class II antigens and have the ability to induce Th1 cells, and comprise selected from the sequence Identification number: 1, 2 or several amino acid modified amino acid sequences are included in the amino acid sequence in the group composed of 1 to 2.

當此等胜肽與APC接觸,或被導入APC,會在APC中被處理而在APC上以經處理的片段被呈現。例如,本發明之胜肽可被處理成通常由11-26個(普通為15-25個)胺基酸殘基構成的片段,以呈現在APC表面。 When these peptides come into contact with APC or are introduced into APC, they are processed in APC and presented as processed fragments on APC. For example, the peptides of the present invention can be processed into fragments usually composed of 11-26 (usually 15-25) amino acid residues for presentation on the surface of APC.

但,當該胜肽序列與具有不同功能的內生或外生蛋白質的胺基酸 序列有一部分相同時,可能會引起副作用,例如自體免疫病症或對於特定物質之過敏症狀。因此,可使用可得的資料庫一開始進行同源性檢索,以避免該胜肽的序列符合其他蛋白質的胺基酸序列的情況。當與自然存在之目標胜肽相較,同源性檢索顯示沒有相同或與目標胜肽有1或2個胺基酸差異的胜肽時,可將該目標胜肽修飾以增強與HLA抗原的結合親和性,及/或增強其Th1細胞誘導能力及/或CTL誘導能力而不會有此種副作用的危險。 However, when the peptide sequence is partly the same as the amino acid sequence of an endogenous or exogenous protein with different functions, it may cause side effects such as autoimmune disorders or allergic symptoms to specific substances. Therefore, homology searches can be performed initially using available databases to avoid situations where the peptide sequence matches the amino acid sequences of other proteins. When compared with naturally occurring target peptides, homology searches show no peptides that are the same or differ from the target peptide by 1 or 2 amino acids, the target peptide can be modified to enhance the HLA antigen Binding affinity, and / or enhancing its Th1 cell inducing ability and / or CTL inducing ability without the risk of such side effects.

雖然上述對於該HLA第II類抗原具有高度結合親和性的胜肽,預期為高度有效,但是依照存在高度結合親和性當做指標的候選胜肽,仍然進一步要檢驗其Th1細胞誘導能力的存在性。在此,用詞「Th1細胞誘導能力」代表當與抗原呈現細胞(APC)接觸時,胜肽經由抗原呈現細胞(APC)授予誘導Th1細胞的能力。又,「Th1細胞誘導能力」包括胜肽誘導Th1細胞活化及/或Th1細胞增殖、促進Th1細胞媒介細胞激素產生,其包括IFN-γ產生,以幫助及/或刺激其他的細胞(例如CTL、巨噬體)。 Although the above peptides with high binding affinity for the HLA class II antigen are expected to be highly effective, according to candidate peptides with high binding affinity as an indicator, the existence of Th1 cell inducing ability is still further tested. Here, the term "Th1 cell-inducing ability" means that when contacted with an antigen-presenting cell (APC), the peptide imparts the ability to induce Th1 cells via the antigen-presenting cell (APC). In addition, "Th1 cell-inducing ability" includes peptide activation of Th1 cells and / or Th1 cell proliferation, and promotion of Th1 cell cytokine production, which includes IFN-γ production to help and / or stimulate other cells (such as CTL, Macrophage).

Th1細胞誘導能力的確認係由以下方式達成:誘導攜帶人類MHC抗原的APC(例如B-淋巴球、巨噬體、及樹狀細胞(DC)),較佳由人類周邊血液單核白血球衍生的DC,與以該胜肽刺激後,與CD4-陽性T細胞(CD4+ T細胞)混合,然後測量該CD4+ T細胞生產與釋出的IFN-γ。或者,該胜肽的Th1細胞誘導能力,可藉由Th1細胞對於CTL之活化來評估。比如,將CD4+ T細胞與由測試胜肽刺激的DC一起培養,然後跟CTL及針對CTL之標靶細胞混合。可將目標細胞以51Cr等放射性標定,從該Th1細胞釋出的細胞素所活化的CTL的細胞毒殺活性,可藉由計算從該標靶細胞釋出的放射性活性計算。或者,Th1細胞誘導活性,可藉由測量於經測試胜肽刺激的APC存在下,Th1細胞所生產及釋出的IFN-γ,並使用抗IFN-γ單株抗體使培養基上的抑制區可見化來評估。 Confirmation of Th1 cell inducing ability is achieved by inducing APCs carrying human MHC antigens (such as B-lymphocytes, macrophages, and dendritic cells (DC)), preferably derived from human peripheral blood mononuclear white blood cells DC was mixed with CD4-positive T cells (CD4 + T cells) after stimulation with the peptide, and then the IFN-γ produced and released by the CD4 + T cells was measured. Alternatively, the Th1 cell-inducing ability of the peptide can be evaluated by the activation of CTL by Th1 cells. For example, CD4 + T cells are cultured with DCs stimulated with test peptides, and then mixed with CTL and target cells targeting CTL. The target cells can be calibrated with radioactivity such as 51 Cr, and the cytotoxic activity of CTLs activated by cytokines released from the Th1 cells can be calculated by calculating the radioactivity released from the target cells. Alternatively, Th1 cell-inducing activity can be measured by measuring the IFN-γ produced and released by Th1 cells in the presence of APC stimulated by the test peptide, and using an anti-IFN-γ monoclonal antibody to make the inhibitory area on the medium visible To evaluate.

除了上述修飾,本發明之胜肽可進一步連結於其他物質,只要所 產生之經連結的胜肽保留原始胜肽的Th1細胞誘導能力即可。適當物質的例子包括,例如:胜肽、脂質、糖類及糖鏈、乙醯基、天然及合成的聚合物等。本發明之胜肽可包含修飾,例如糖化、側鏈氧化或磷酸化等,所提供之修飾不會損害該原始胜肽的生物學活性。此等種類修飾可實施以用於提供額外的功能(例如標靶功能,及傳遞功能),或使該胜肽穩定化。 In addition to the above modifications, the peptides of the present invention may be further linked to other substances, as long as the resulting linked peptide retains the Th1 cell-inducing ability of the original peptide. Examples of suitable substances include, for example, peptides, lipids, sugars and sugar chains, acetamyl, natural and synthetic polymers, and the like. The peptides of the present invention may include modifications, such as saccharification, side chain oxidation or phosphorylation, etc. The modifications provided will not impair the biological activity of the original peptide. These kinds of modifications can be implemented to provide additional functions (such as target function, and delivery function), or to stabilize the peptide.

例如,為了增加一胜肽的體內穩定性,該技術領域中已知導入D-胺基酸、胺基酸擬似物或非天然胺基酸;此概念也可採用於本發明之胜肽。一胜肽的穩定性,可以用多種方式分析。例如可使用胜肽酶及各種生物學介質,例如人類血漿及血清,以測試穩定性(參見例如Verhoef et al.,Eur J Drug Metab Pharmacokin 1986,11:291-302)。 For example, in order to increase the in vivo stability of a peptide, it is known in the art to introduce D-amino acids, amino acid mimetics or unnatural amino acids; this concept can also be applied to the peptides of the present invention. The stability of a peptide can be analyzed in a variety of ways. For example, peptidase and various biological media such as human plasma and serum can be used to test stability (see, for example, Verhoef et al. , Eur J Drug Metab Pharmacokin 1986, 11: 291-302).

本發明之胜肽,可以與HLA第II類抗原一起以複合體形式呈現於APC之表面,然後誘導Th1細胞。因此本發明也包括與HLA第II類抗原形成複合體在APC表面上的胜肽。呈現本發明胜肽之APC,可作為疫苗接種。 The peptide of the present invention can be presented on the surface of APC as a complex together with HLA type II antigen, and then induce Th1 cells. The present invention therefore also includes peptides on the surface of APCs that form complexes with HLA class II antigens. APCs presenting the peptides of the present invention can be vaccinated.

包括在上述複合體中之HLA抗原之形式必須匹配於須治療及/或預防之對象之HLA抗原之形式。例如,日本群體中,HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9係盛行,故適於治療日本病患。一般而言,臨床上會預先檢查須治療之病患的HLA抗原類型,以能夠適當選擇具有對於特定HLA第II類抗原結合之能力的胜肽。於較佳具體例,本發明之胜肽可以混雜的方式誘導Th1細胞。在此,當胜肽可誘導由至少2種不同的MHC第II類分子限制之Th1細胞時,則此胜肽之Th1細胞誘導能力係稱為是「混雜的(promiscuous)」。換言之,當一胜肽被至少2種不同的MHC第II類分子辨識,則此抗原辨識被視為「混雜的」。當使用於胜肽之上下文,詞彙「由至少2種不同之MHC第II類分子辨識」,係指此胜肽或其片段可結合於至少2種不同的MHC第II類分子。例如,MPHOSPH1272-298-LP(序列識別號:1)係被HLA-DR9、HLA-DP5及HLA-DR4辨 識,MPHOSPH1326-351-LP(序列識別號:2)係被HLA-DR4和HLA-DP2辨識。因此此等胜肽係「混雜的」抗原決定位的典型例。 The form of the HLA antigen included in the complex must match the form of the HLA antigen in the subject to be treated and / or prevented. For example, in the Japanese population, HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9 are prevalent, so they are suitable for treating Japanese patients. In general, the HLA antigen type of the patient to be treated is pre-checked clinically to be able to appropriately select a peptide having the ability to bind to a specific HLA class II antigen. In a preferred embodiment, the peptide of the present invention can induce Th1 cells in a promiscuous manner. Here, when the peptide can induce Th1 cells restricted by at least two different MHC class II molecules, the peptide's Th1 cell inducing ability is referred to as "promiscuous". In other words, when a peptide is recognized by at least two different MHC class II molecules, this antigen recognition is considered "hybrid." When used in the context of peptides, the term "identified by at least 2 different MHC class II molecules" means that the peptide or fragment thereof can bind to at least 2 different MHC class II molecules. For example, MPHOSPH1 272-298- LP (sequence identification number: 1) is recognized by HLA-DR9, HLA-DP5, and HLA-DR4, and MPHOSPH1 326-351 -LP (sequence identification number: 2) is recognized by HLA-DR4 and HLA. -DP2 identification. These peptides are therefore typical examples of "hybrid" epitopes.

當使用HLA-DR9、HLA-DP5或HLA-DR4陽性APC,宜使用具有序列識別號:1之胺基酸序列的胜肽。當使用HLA-DR4或HLA-DP2陽性APC,較佳使用具有序列識別號:2之胺基酸序列的胜肽。 When using HLA-DR9, HLA-DP5 or HLA-DR4-positive APC, it is preferable to use a peptide having an amino acid sequence of sequence identification number: 1. When HLA-DR4 or HLA-DP2 positive APC is used, it is preferable to use a peptide having an amino acid sequence having a sequence identification number: 2.

因此,於較佳具體例中,可使用具有序列識別號:1之胺基酸序列的胜肽,於在誘導前已鑑別具有HLA-DR9、HLA-DP5或HLA-DR4之對象中誘導Th1細胞。同樣地,可使用具有序列識別號:2之胺基酸序列的胜肽,於在誘導前已鑑別具有HLA-DR4或HLA-DP2之對象中誘導Th1細胞。 Therefore, in a preferred embodiment, a peptide having an amino acid sequence of sequence identification number: 1 can be used to induce Th1 cells in a subject that has been identified to have HLA-DR9, HLA-DP5, or HLA-DR4 before induction. . Similarly, a peptide having an amino acid sequence of SEQ ID NO: 2 can be used to induce Th1 cells in a subject that has been identified to have HLA-DR4 or HLA-DP2 before induction.

III.製備MPHOSPH1胜肽 III. Preparation of MPHOSPH1 peptide

本發明之胜肽可使用周知的技術製備。例如本發明胜肽可藉由使用重組DNA技術或化學合成被合成製備。本發明之胜肽可個別合成,或製成包括兩個或更多胜肽的較長的多胜肽。本發明胜肽可之後單離成亦即經精製或單離成實質上不含其他天然發生的宿主蛋白質及其片段,或其他任意的化學物質。 The peptides of the present invention can be prepared using well-known techniques. For example, the peptides of the present invention can be prepared synthetically by using recombinant DNA technology or chemical synthesis. The peptides of the present invention can be synthesized individually or made into longer polypeptides including two or more peptides. The peptides of the present invention can then be isolated, that is, purified or isolated, substantially free of other naturally occurring host proteins and fragments thereof, or other arbitrary chemicals.

本發明之胜肽可包含修飾,例如糖化、側鏈氧化或磷酸化;所提供之修飾不損害原始參考胜肽的生物學活性。其他說明性的修飾包括引入D-胺基酸或其他胺基酸擬似物。可使用這些修飾以增加該胜肽的血清半衰期。 The peptides of the invention may include modifications such as saccharification, side chain oxidation or phosphorylation; the modifications provided do not impair the biological activity of the original reference peptide. Other illustrative modifications include the introduction of D-amino acids or other amino acid mimetics. These modifications can be used to increase the serum half-life of the peptide.

本發明之胜肽可依據選擇的胺基酸序列由化學合成獲得。例如可採用於合成的習知胜肽合成方法包括:(i)Peptide Synthesis,Interscience,New York,1966;(ii)The Proteins,Vol.2,Academic Press,New York,1976;(iii)Peptide Synthesis(in Japanese),Maruzen Co.,1975;(iv)Basics and Experiment of Peptide Synthesis(in Japanese),Maruzen Co.,1985; (v)Development of Pharmaceuticals(second volume)(in Japanese),Vol.14(peptide synthesis),Hirokawa,1991;(vi)WO99/67288;及(vii)Barany G.& Merrifield R.B.,Peptides Vol.2,"Solid Phase Peptide Synthesis",Academic Press,New York,1980,100-118. The peptide of the present invention can be obtained by chemical synthesis according to the selected amino acid sequence. For example, conventional peptide synthesis methods that can be used for synthesis include: (i) Peptide Synthesis, Interscience, New York, 1966; (ii) The Proteins, Vol. 2, Academic Press, New York, 1976; (iii) Peptide Synthesis (in Japanese), Maruzen Co., 1975; (iv) Basics and Experiment of Peptide Synthesis (in Japanese), Maruzen Co., 1985; (v) Development of Pharmaceuticals (second volume) (in Japanese), Vol. 14 (peptide synthesis ), Hirokawa, 1991; (vi) WO99 / 67288; and (vii) Barany G. & Merrifield RB, Peptides Vol. 2, "Solid Phase Peptide Synthesis", Academic Press, New York, 1980, 100-118.

或者,本發明之胜肽可採用任何已知用於生產胜肽的的遺傳工程方法獲得(例如Morrison J,J Bacteriology 1977,132:349-51;Clark-Curtiss & Curtiss,Methods in Enzymology(eds.Wu et al.)1983,101:347-62)。例如,先製備庇護有編碼為可表現形式(例如對應於啟動子序列的調節序列的下游)的目標胜肽的聚核苷酸的適當載體,並轉形到適當的宿主細胞中。然後將該宿主細胞培養以生產關注的胜肽。本發明之胜肽也可採用體外轉譯系統於體外生產。 Alternatively, the peptides of the present invention can be obtained using any genetic engineering method known for the production of peptides (e.g., Morrison J, J Bacteriology 1977, 132: 349-51; Clark-Curtiss & Curtiss, Methods in Enzymology (eds. Wu et al. ) 1983, 101: 347-62). For example, an appropriate vector sheltering a polynucleotide encoding a peptide of interest in an expressible form (eg, downstream of a regulatory sequence corresponding to a promoter sequence) is first prepared and transformed into an appropriate host cell. This host cell is then cultured to produce the peptide of interest. The peptides of the present invention can also be produced in vitro using an in vitro translation system.

IV.聚核苷酸 IV. Polynucleotides

本發明亦提供聚核苷酸,其編碼為前述本發明胜肽當中任意者。此包括從天然發生的MPHOSPH1基因(GenBank存取號NM_001284259(序列識別號:5)或NM_016195(序列識別號:7))衍生的聚核苷酸,及其具有經保守性修飾的核苷酸序列的那些。在此用詞「經保守性修飾的核苷酸序列」係指編碼為相同或基本上相同的胺基酸序列的序列。因為遺傳密碼的退化性,有大量的功能上相同的核酸會編碼為任意給定的蛋白質。比如,密碼子GCA、GCC、GCG及GCU都編碼為胺基酸丙胺酸。因此,當密碼子在每個位置指明丙胺酸時,該密碼子可改變成任意對應的所述密碼子,而不會改變所編碼的多胜肽。此種核酸變異為「靜默變異」,其為一種經保守性修飾的變異。每個在此敘述的編碼為一胜肽的核酸,也敘述所有該核酸的可能的靜默變異。該技術領域中具有通常知識者將體認到一核酸中的各密碼子(除了AUG以外,AUG通常為甲硫胺酸的唯一密碼子,而TGG通常為色胺酸的唯一密碼子)可經修飾以產生功能上同一的分子。因此, 編碼為一胜肽的核酸的各靜默變異係暗示敘述在各揭露的序列中。 The present invention also provides a polynucleotide encoding any of the aforementioned peptides of the present invention. This includes polynucleotides derived from the naturally occurring MPHOSPH1 gene (GenBank Accession No. NM_001284259 (sequence identification number: 5) or NM_016195 (sequence identification number: 7)), and nucleotide sequences with conservative modifications. Of those. The term "conservatively modified nucleotide sequence" as used herein refers to a sequence encoded as the same or substantially the same amino acid sequence. Because of the degenerative nature of the genetic code, there are a large number of functionally identical nucleic acids that can encode any given protein. For example, the codons GCA, GCC, GCG, and GCU are all encoded as amino acid alanine. Therefore, when a codon indicates alanine at each position, the codon can be changed to any corresponding codon without changing the encoded polypeptide. This nucleic acid mutation is a "silent mutation", which is a conservatively modified mutation. Each nucleic acid encoding a peptide described herein also describes all possible silent variations of that nucleic acid. Those with ordinary knowledge in the technical field will recognize each codon in a nucleic acid (except for AUG, AUG is usually the only codon for methionine, and TGG is usually the only codon for tryptophan). Modifications to produce functionally identical molecules. Therefore, each silent variation of a nucleic acid encoded as a peptide is implicitly described in each disclosed sequence.

本發明之聚核苷酸可由DNA、RNA及其衍生物構成。如該技術領域中為人所知者,DNA分子係適當的由鹼基例如A、T、C及G構成,而在RNA中T係置換為U。該技術領域中具有通常知識者將體認非天然發生的鹼基也會包括在聚核苷酸中。 The polynucleotide of the present invention may be composed of DNA, RNA, and derivatives thereof. As is known in the art, DNA molecules are suitably composed of bases such as A, T, C, and G, and T is replaced with U in RNA. Non-naturally occurring bases recognized by those of ordinary skill in the art will also be included in the polynucleotide.

本發明之聚核苷酸可編碼為有或沒有中介(intervening)胺基酸序列的多種本發明之胜肽。例如,該中介胺基酸序列可提供該聚核苷酸或該經轉譯的胜肽的切斷部位(例如,酵素辨識序列)。再者該聚核苷酸可包括對於編碼為本發明胜肽的編碼序列的任何額外的序列。例如該聚核苷酸可為一重組聚核苷酸,其包括對表現該胜肽所需的調節序列,或可為具有標記基因的表現載體(質體)等。一般而言,此種重組聚核苷酸可利用習知的重組技術,使用例如聚合酶及內切核酸酶操作聚核苷酸而製備。 The polynucleotides of the invention can be encoded as a variety of peptides of the invention with or without intervening amino acid sequences. For example, the intervening amino acid sequence can provide a cleavage site for the polynucleotide or the translated peptide (eg, an enzyme recognition sequence). Furthermore, the polynucleotide may include any additional sequence for a coding sequence encoding a peptide of the present invention. For example, the polynucleotide may be a recombinant polynucleotide, which includes regulatory sequences required for expression of the peptide, or may be a expression vector (plasmid) with a marker gene, and the like. In general, such recombinant polynucleotides can be prepared using conventional recombinant techniques using, for example, polymerases and endonucleases to manipulate the polynucleotides.

重組及化學合成技術均可使用於生產本發明之聚核苷酸。例如聚核苷酸可藉由插到適當載體中而生產,該載體當轉染到勝任細胞內時可表現。或者,聚核苷酸可使用PCR技術放大,或在適當宿主中表現(參見例如Sambrook et al.,Molecular Cloning:A Laboratory Manual,Cold Spring Harbor Laboratory,New York,1989)。或者,聚核苷酸可使用固相技術合成,如Beaucage SL & Iyer RP,Tetrahedron 1992,48:2223-311;Matthes et al.,EMBO J 1984,3:801-5所敘述。 Both recombinant and chemical synthesis techniques can be used to produce the polynucleotides of the present invention. For example, polynucleotides can be produced by insertion into a suitable vector, which can be expressed when transfected into competent cells. Alternatively, the polynucleotides can be amplified using PCR technology or expressed in an appropriate host (see, eg, Sambrook et al. , Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, New York, 1989). Alternatively, the polynucleotides can be synthesized using solid-phase techniques, as described by Beaucage SL & Iyer RP, Tetrahedron 1992, 48: 2223-311; Matthes et al. , EMBO J 1984, 3: 801-5.

V.抗原呈現細胞(APC) V. Antigen presenting cells (APC)

本發明也提供抗原呈現細胞(APC),其在表面上呈現於HLA第II類抗原與本發明之胜肽或其片段之間形成的複合體。藉由與本發明胜肽接觸而獲得之該APC可由受治療及/或預防的病患獲得,且本身可當做疫苗投予,或與其他包括本發明之胜肽、Th1細胞或CTL的藥物組合投予。 The present invention also provides an antigen-presenting cell (APC) that appears on the surface as a complex formed between an HLA class II antigen and a peptide or fragment thereof of the present invention. The APC obtained by contacting with the peptide of the present invention can be obtained from a treated and / or prevented patient, and can be administered as a vaccine itself, or in combination with other drugs including the peptide of the present invention, Th1 cells or CTL Vote.

該APC不限於特定種類的細胞,且包括但不限於樹狀細胞(DC)、 蘭氏(Langerhans)細胞、巨噬體、B細胞及經活化的T細胞,此等已知會在表面上呈現蛋白質性抗原,而會被淋巴球所辨識。因為DC係代表性的APC,其在APC中具有最強的Th1細胞誘導活性,故DC當成本發明的APC有用。 The APC is not limited to a specific type of cell and includes, but is not limited to, dendritic cells (DC), Langerhans cells, macrophages, B cells, and activated T cells, which are known to present proteins on the surface Sexual antigens, but will be recognized by lymphocytes. Because DC is a representative APC, it has the strongest Th1 cell-inducing activity in APC, so DC is useful as the APC of the invention.

再者,於較佳具體例,本發明之胜肽也會誘導經由MHC第I類抗原調節之CTL反應及由MHC第II類抗原媒介之Th1細胞反應。一般,已周知MHC第I類抗原辨識的抗原決定位的長度較短(例如8-10個胺基酸殘基)於MHC第II類(15或更長)。因此,本發明之一些胜肽之經處理產物可造成誘導CTL。事實上,MPHOSPH1272-298-LP(序列識別號:1)可誘導會辨識片段(YIYDLFVPVS:序列識別號:3),且MPHOSPH1272-298-LP(序列識別號:1)可誘導會辨識片段(IYNEYIYDL:序列識別號:4)的CTL。因此,本發明之此等胜肽不僅可誘導Th1細胞,也可在APC中將其處理後誘導CTL。換言之,與本發明之上述胜肽接觸過的APC會將此等胜肽與MHC第II類抗原一起呈現並同時將此等處理以將此等片段與MHC第I類抗原一起呈現。結果,使用本發明之上述胜肽,可以誘導Th1細胞和CTL。 Furthermore, in preferred embodiments, the peptides of the present invention also induce CTL responses regulated by MHC class I antigens and Th1 cell responses mediated by MHC class II antigens. In general, it is known that epitopes recognized by MHC class I antigens are shorter in length (eg, 8-10 amino acid residues) than MHC class II (15 or longer). Therefore, the processed products of some of the peptides of the present invention can cause the induction of CTL. In fact, MPHOSPH1 272-298- LP (sequence identification number: 1) can induce recognizable fragments (YIYDLFVPVS: sequence identification number: 3), and MPHOSPH1 272-298-LP (sequence identification number: 1) can induce recognizable fragments (IYNEYIYDL: sequence identification number: 4). Therefore, these peptides of the present invention can not only induce Th1 cells, but can also induce CTL after treating them in APC. In other words, APCs that have been in contact with the above peptides of the present invention will present these peptides with MHC class II antigens and simultaneously process these to present these fragments with MHC class I antigens. As a result, using the above peptides of the present invention, Th1 cells and CTLs can be induced.

例如APC可藉由從周邊血液單核細胞誘導DC,然後使其與本發明之胜肽在體外、生物體外或體內接觸(刺激)而獲得。當本發明之胜肽對於該對象投予時,在該對象的體內會誘導呈現本發明之胜肽或其片段的APC。用語「誘導一APC」,包括以本發明之胜肽接觸(刺激)一細胞以將於HLA第II類抗原與本發明之胜肽或其片段之間形成的複合體呈現於細胞表面上。或者,於將本發明之胜肽導入於APC使APC呈現此胜肽或其片段後,此等APC可以作為疫苗對於該對象投予。例如生物體外投予可包括以下步驟:(a)從第一對象收集APC:(b)使步驟(a)的APC接觸本發明之胜肽,(c)對於第二對象投予步驟(b)之該已載入胜肽的APC。 For example, APC can be obtained by inducing DC from peripheral blood monocytes and then contacting (stimulating) the peptide of the present invention in vitro, in vitro or in vivo. When the peptide of the present invention is administered to the subject, an APC presenting the peptide of the present invention or a fragment thereof is induced in the body of the subject. The term "inducing an APC" includes contacting (stimulating) a cell with a peptide of the present invention to present a complex formed between a HLA class II antigen and a peptide or a fragment thereof of the present invention on a cell surface. Alternatively, after the peptide of the present invention is introduced into APC so that the APC presents the peptide or a fragment thereof, these APCs can be administered as a vaccine to the subject. For example, biological in vitro administration may include the following steps: (a) collecting APC from a first subject: (b) contacting the APC of step (a) with a peptide of the present invention, (c) step (b) of administering a second subject This should be loaded into the peptide's APC.

該第一對象及第二對象可為同一個體或不同個體。或者,依本發明,提供使用本發明之胜肽製造用於誘導APC的醫藥組合物的用途。此外,本發明提供製造用於誘導APC的醫藥組合物的方法或處理,其中此方法包括將本發明之胜肽與醫藥上可接受的擔體混合或配製的步驟。又,本發明也提供用以誘導APC的本發明之胜肽。由步驟(b)獲得的APC可作為疫苗對於該對象投予。 The first object and the second object may be the same individual or different individuals. Alternatively, according to the present invention, there is provided the use of the peptide of the present invention to produce a pharmaceutical composition for inducing APC. In addition, the present invention provides a method or treatment for manufacturing a pharmaceutical composition for inducing APC, wherein the method includes a step of mixing or formulating a peptide of the present invention with a pharmaceutically acceptable carrier. The present invention also provides a peptide of the present invention for inducing APC. The APC obtained in step (b) can be administered to the subject as a vaccine.

本發明一態樣中,本發明之APC有高水平的Th1細胞誘導能力。在此,用語「高水平的Th1細胞誘導能力」中,高水平係相對於APC沒有與胜肽接觸或與不會誘導Th1細胞的胜肽接觸時的水平。在此,使用於APC的上下文時,用語「Th1細胞誘導能力」,係指APC當與CD4+ T細胞接觸時誘導Th1細胞的能力。如此之具有高水平之Th1細胞誘導能力的APC也可藉由包括於體外將編碼為本發明胜肽的聚核苷酸轉移到APC的步驟的方法來製備。該將被導入的聚核苷酸可為DNA或RNA形式。導入的方法的例子包括,而無特別限制,各種在該領域中實施的習知方法,例如脂染、電穿孔或磷酸鈣法。更具體而言,可依照Cancer Res 1996,56:5672-7;J Immunol 1998,161:5607-13;J Exp Med 1996,184:465-72;國際公開號2000-509281的已公開的日文翻譯所述實施。藉由將該基因傳遞到APC中,該基因會在細胞中進行轉錄、轉譯等,然後獲得的蛋白質會由MHC第I類或第II類處理,並經一呈現路徑進行以呈現本發明之該胜肽。或者,本發明之APC可藉由以包括使APC接觸本發明胜肽之步驟的方法製備。 In one aspect of the present invention, the APC of the present invention has a high level of Th1 cell inducing ability. Here, the term "high level of Th1 cell inducing ability" refers to the level when APC is not in contact with the peptide or when it is not in contact with the peptide that does not induce Th1 cells. Here, in the context of APC, the term "Th1 cell inducing ability" refers to the ability of APC to induce Th1 cells when it comes into contact with CD4 + T cells. Such APCs having a high level of Th1 cell-inducing ability can also be prepared by a method including a step of transferring a polynucleotide encoding a peptide of the present invention to APC in vitro. The polynucleotide to be introduced may be in the form of DNA or RNA. Examples of the method of introduction include, but are not particularly limited to, various conventional methods performed in the field, such as lipid staining, electroporation, or calcium phosphate method. More specifically, published Japanese translations can be made in accordance with Cancer Res 1996, 56: 5672-7; J Immunol 1998, 161: 5607-13; J Exp Med 1996, 184: 465-72; International Publication No. 2000-509281 The implementation. By transferring the gene to APC, the gene will be transcribed, translated, etc. in the cell, and then the protein obtained will be processed by MHC class I or class II and proceeded through a presentation path to present the present invention. Peptide. Alternatively, the APC of the present invention can be prepared by a method including a step of contacting the APC with a peptide of the present invention.

於較佳具體例,本發明之APC,可為呈現選自於HLA-DR9、HLA-DP5及HLA-DR4之MHC第II類分子與本發明之胜肽(包括序列識別號:1之胺基酸序列)之複合體於其表面上的APC。於另一具體例,本發明之APC可為呈現於選自於HLA-DR4和HLA-DP2中之MHC第II類分子與本發明之胜肽(包括序列識別號:2之胺基酸序列)之複合體於其表面上的APC。較佳者,HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9可各為HLA-DPB1*02:01、HLA-DRB1*05: 01、HLA-DRB1*04:05及HLA-DPB1*09:01。 In a preferred embodiment, the APC of the present invention may be an MHC class II molecule selected from the group consisting of HLA-DR9, HLA-DP5, and HLA-DR4 and the peptide of the present invention (including the amino group of sequence identification number: 1). Acid sequence) complex on its surface. In another specific example, the APC of the present invention may be a MHC class II molecule selected from HLA-DR4 and HLA-DP2 and a peptide of the present invention (including the amino acid sequence of SEQ ID NO: 2) APC on its surface. Preferably, HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9 can each be HLA-DPB1 * 02: 01, HLA-DRB1 * 05: 01, HLA-DRB1 * 04: 05, and HLA-DPB1 * 09:01.

VI. T輔助1型細胞(Th1細胞) VI. T helper type 1 cells (Th1 cells)

對抗任意本發明之胜肽所誘導之Th1細胞,會強化任意效應子細胞之免疫反應,此任意效應子細胞包括於體內標靶於癌細胞之CTL,且可以與此胜肽本身以類似方式作為疫苗。因此本發明也提供單離的Th1細胞,其係由任意本發明之胜肽所專一性誘導或活化。 Against the Th1 cells induced by any of the peptides of the present invention, it will strengthen the immune response of any effector cells. This arbitrary effector cells include CTLs that target cancer cells in the body, and can be used in a similar manner to this peptide itself vaccine. The invention therefore also provides isolated Th1 cells which are specifically induced or activated by any of the peptides of the invention.

此種Th1細胞,可藉由(1)對於一對象投予一或多種本發明之胜肽,接著從此對象收集Th1細胞,(2)於體外以本發明之胜肽接觸(刺激)APC及CD4+ T細胞或周邊血液單核細胞,然後單離的Th1細胞,(3)於體外使CD4+ T細胞或周邊血液單核細胞與本發明之APC接觸,或(4)導入編碼為TCR次單元兩者之聚核苷酸或編碼為各TCR次單元之聚核苷酸到CD4+ T細胞中,其中此TCR可結合於MHC第II類分子與本發明之胜肽之複合體。如(3)之方法之APC,可藉由上述方法製備。方法(4)的細節將於以下於項目「VII. T細胞受體(TCR)」詳述。 Such Th1 cells can be obtained by (1) administering one or more peptides of the present invention to a subject, then collecting Th1 cells from the subject, and (2) contacting (stimulating) APC and CD4 with the peptides of the present invention in vitro + T cells or peripheral blood mononuclear cells, and then isolated Th1 cells, (3) contact the CD4 + T cells or peripheral blood mononuclear cells with the APC of the present invention in vitro, or (4) introduce a coded TCR subunit The two polynucleotides or polynucleotides encoded as TCR subunits are incorporated into CD4 + T cells, wherein the TCR can be bound to a complex of a MHC class II molecule and a peptide of the present invention. The APC according to the method (3) can be prepared by the above method. The details of method (4) will be detailed below under item "VII. T cell receptor (TCR)".

藉由以本發明APC刺激而誘導之Th1細胞,可衍生自待治療及/或預防之病患,且其本身可供投予,或與包括本發明胜肽之其他藥物組合投予,以調節效應之用途。此獲得之Th1細胞可活化及/或刺激負責細胞免疫之免疫細胞(例如CTL、巨噬體)。可由本發明之Th1細胞活化的此種免疫細胞,包括:對於目標細胞例如癌細胞顯示細胞毒性的CTL。例如針對此CTL之目標細胞,可為內源性表現MPHOSPH1之細胞(例如癌細胞),或經以MPHOSPH1基因轉染的細胞。於較佳具體例,本發明之胜肽可包括至少一CTL抗原決定位胜肽之胺基酸序列,且除了誘導Th1細胞,也誘導對抗表現MPHOSPH1之細胞例如癌細胞之CTL。於此情形本發明之胜肽,可於體外同時或依序誘導Th1細胞及CTL,且此誘導的Th1細胞可有效活化已誘導的CTL。因此此包括至少一CTL抗原決定位胜肽之胺基酸序列的胜肽,為適於癌症免疫療法的胜肽。 Th1 cells induced by stimulation with the APC of the present invention can be derived from a patient to be treated and / or prevented, and can be administered by themselves or in combination with other drugs including the peptide of the present invention to regulate Uses of effects. The Th1 cells thus obtained can activate and / or stimulate immune cells (eg, CTL, macrophages) responsible for cellular immunity. Such immune cells that can be activated by Th1 cells of the present invention include CTLs that exhibit cytotoxicity to target cells, such as cancer cells. For example, the target cells for this CTL may be cells that endogenously express MPHOSPH1 (such as cancer cells), or cells transfected with the MPHOSPH1 gene. In a preferred embodiment, the peptide of the present invention may include at least one amino acid sequence of a CTL epitope peptide, and in addition to inducing Th1 cells, it may also induce CTL against cells expressing MPHOSPH1, such as cancer cells. In this case, the peptide of the present invention can induce Th1 cells and CTLs simultaneously or sequentially in vitro, and the induced Th1 cells can effectively activate the induced CTLs. Therefore, the peptide including the amino acid sequence of at least one CTL epitope peptide is a peptide suitable for cancer immunotherapy.

再者,本發明之Th1細胞分泌各種細胞激素(例如IFN-γ),其能以抗原獨立的方式,活化及/或刺激對抗其他目標細胞的CTL。因此本發明之Th1細胞,也有助於增強標靶於表現TAA而非MPHOSPH1之細胞的CTL活性。因此,本發明之Th1細胞不僅對於表現MPHOSPH1之腫瘤的免疫療法有效,對於表現其他TAA,及本發明之胜肽與APC之腫瘤也有效。 Furthermore, the Th1 cells of the present invention secrete various cytokines (such as IFN-γ), which can activate and / or stimulate CTL against other target cells in an antigen-independent manner. Therefore, the Th1 cells of the present invention also help to enhance the CTL activity targeted to cells expressing TAA instead of MPHOSPH1. Therefore, the Th1 cells of the present invention are effective not only for immunotherapy for tumors expressing MPHOSPH1, but also for tumors expressing other TAAs, and peptides and APCs of the present invention.

於一些具體例,本發明之Th1細胞辨識呈現HLA-DR或HLA-DP抗原與本發明之胜肽之複合體的細胞。於Th1細胞之上下文,詞彙「辨識一細胞」,係指經由其TCR結合於細胞表面上的MHC第II類分子與本發明之胜肽的複合體,及被以抗原專一性方式活化。在此,詞彙「被以抗原專一性方式活化」,係指回應於特定MHC第II類分子及胜肽而活化,且誘導從此活化的Th1細胞的細胞素生產。於較佳具體例,HLA-DR及HLA-DP可選自於HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9構成之群組。 In some specific examples, the Th1 cells of the present invention recognize cells that present a complex of HLA-DR or HLA-DP antigen and the peptide of the present invention. In the context of Th1 cells, the term "identifying a cell" refers to a complex of MHC class II molecules bound to the cell surface via its TCR and a peptide of the invention, and is activated in an antigen-specific manner. Here, the term "activated in an antigen-specific manner" refers to activation in response to a specific MHC class II molecule and peptide, and induces cytokine production of Th1 cells activated therefrom. In a preferred embodiment, HLA-DR and HLA-DP can be selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9.

VII. T細胞受體(TCR) VII. T cell receptor (TCR)

本發明也提供一種組合物,其包含編碼一或多個為多胜肽的一或多個聚核苷酸,該多胜肽能形成T細胞受體(TCR)的次單元;並提供使用其之方法。該TCR次單元具有形成TCR的能力,其對於CD4+ T細胞提供MPHOSPH1專一性給對抗呈現MPHOSPH1胜肽的APC。藉由使用該技術領域中的已知方法,可鑑別以本發明之胜肽誘導的Th1細胞的TCR次單元的α-與β-鏈的核酸(WO2007/032255與Morgan,et al.,J Immunol,171,3288(2003))。衍生物TCR可能以高親和力結合於呈現該MPHOSPH1胜肽的APC,且視情形媒介有效率的細胞素生產。 The invention also provides a composition comprising one or more polynucleotides encoding one or more peptides capable of forming a subunit of a T cell receptor (TCR); and providing the use thereof Method. This TCR subunit has the ability to form TCR, which provides MPHOSPH1 specificity for CD4 + T cells to APCs that counteract the presentation of MPHOSPH1 peptides. By using a method known in the technical field, it is possible to identify the α- and β-chain nucleic acids of TCR subunits of Th1 cells induced with the peptide of the present invention (WO2007 / 032255 and Morgan, et al., J Immunol 171, 3288 (2003)). The derivative TCR may bind to the APC presenting the MPHOSPH1 peptide with high affinity and, depending on the situation, mediate efficient cytokine production.

編碼為TCR次單元的一聚核苷酸/多個聚核苷酸(亦即,編碼為TCR次單元兩者的單一聚核苷酸,或編碼為分開之TCR次單元的多個聚核苷酸)可以包含到適當載體內,例如反轉錄病毒載體。此等載體在該技術領域為人所熟知。該聚核苷酸或包含該聚核苷酸的載體,通常可傳送到CD4+T細胞內,例如 來自病患的CD4+ T細胞。有利地,本發明提供一種現成(off-the-shelf)的組合物,能夠快速修飾病患所擁有的T細胞(或另一對象的T細胞),而快速及簡單產生具有優異的癌細胞殺死性質的經修飾的T細胞。 One polynucleotide / polynucleotides encoded as TCR subunits (i.e., a single polynucleotide encoded as both TCR subunits, or multiple polynucleosides encoded as separate TCR subunits The acid) may be contained in a suitable vector, such as a retroviral vector. Such vectors are well known in the art. The polynucleotide, or a vector comprising the polynucleotide, can generally be delivered into a CD4 + T cell, such as a CD4 + T cell from a patient. Advantageously, the present invention provides an off-the-shelf composition capable of rapidly modifying T cells (or T cells of another subject) possessed by a patient, and quickly and simply producing cells with excellent cancer cell killing. Modified T cells that are dead.

舉例而言,在受MPHOSPH1-LP1(MPHOSPH1272-298-LP)刺激的Th細胞中,以HLA-DR9限制的方式增加TCR-α及-β次單元,其每個α和β次單元分別具有由序列識別號:9和19的胺基酸序列所組成的CDR3(第6圖)。因此,對於本發明的Th1誘導而言,編碼這些胺基酸序列的聚核苷酸是較佳的。同樣地,Th1細胞,其表現形成於α和β次單元之間的TCR,其中每個α和β次單元分別具有由序列識別號:9和19的胺基酸序列所組成的CDR3,也為本發明的較佳實施例。通常TCR的抗體專一性主要取決於其CDR3。因此,藉由以序列識別號:9和19分別地取代CDR3的α和β次單元,也可從已知的TCR重建MPHOSPH1-LP1專一性TCR。這樣具有從另一次單元移殖的CDR3的TCR可被稱為嵌合(chimeric)TCR。專一性CDR的移殖方法在本發明所屬技術領域中為習知。 For example, in Th cells stimulated by MPHOSPH1-LP1 (MPHOSPH1 272-298- LP ), TCR-α and -β subunits are added in a HLA-DR9 restricted manner, each of which has α and β subunits, respectively. CDR3 consisting of the amino acid sequences of sequence identification numbers: 9 and 19 (Figure 6). Therefore, for the Th1 induction of the present invention, polynucleotides encoding these amino acid sequences are preferred. Similarly, Th1 cells exhibit a TCR formed between α and β subunits, where each α and β subunit has a CDR3 consisting of the amino acid sequences of sequence identification numbers: 9 and 19, respectively. A preferred embodiment of the present invention. Generally, the antibody specificity of TCR depends mainly on its CDR3. Therefore, by replacing the α and β subunits of CDR3 with sequence identification numbers: 9 and 19, respectively, MPHOSPH1-LP1 specific TCR can also be reconstructed from known TCRs. Such a TCR with CDR3 colonized from another subunit can be referred to as a chimeric TCR. Methods for transplanting specific CDRs are well known in the art to which the present invention pertains.

本發明更提供Th1細胞,其係藉由將編碼為TCR次單元兩者的聚核苷酸,或編碼為各TCR次單元的聚核苷酸進行性狀引入(transduction)而製備,其中此種TCR次單元能結合於MPHOSPH1胜肽(例如序列識別號:1,於HLA-DR9、HLA-DP5或HLA-DR4背景;序列識別號:2,於HLA-DR4或HLA-DP2背景)。該經性狀引入的Th1細胞能夠在體內自導引到癌細胞,且能使用周知的培養方法於體外擴增(例如,Kawakami et al.,J Immunol.,142,3452-3461(1989))。上述製備之Th1細胞,可使用於形成免疫原性組合物,而有用於需要治療或保護的病患中之癌症的治療或避免。 The present invention further provides a Th1 cell, which is prepared by transducing a polynucleotide encoding both TCR subunits or a polynucleotide encoding each TCR subunit, wherein such TCR The subunit can bind to the MPHOSPH1 peptide (for example, sequence identification number: 1, on the background of HLA-DR9, HLA-DP5, or HLA-DR4; sequence identification number: 2, on the background of HLA-DR4 or HLA-DP2). The trait-introduced Th1 cells can be self-directed to cancer cells in vivo and can be expanded in vitro using well-known culture methods (for example, Kawakami et al., J Immunol., 142, 3452-3461 (1989)). The Th1 cells prepared as described above can be used for the formation of immunogenic compositions, and are useful for the treatment or avoidance of cancer in patients in need of treatment or protection.

VIII.醫藥藥劑或組合物 VIII. Pharmaceutical agents or compositions

當本發明的方法與組合物在上下文中指出「治療」癌症有用,若其造成臨床上的益處,例如在該對象中的MPHOSPH1基因表現減低、癌症的大小減小、 流行程度或轉移潛力減低,則治療係視為「有效」。當該治療係以預防性使用時,「有效」意指其延遲或防止癌症形成或防止或減輕癌症的臨床症狀。有效係利用任何已知相關用於診斷或治療特定腫瘤形式的方法決定。 When the methods and compositions of the present invention indicate in context that it is useful to "treat" cancer, if it results in clinical benefits, such as reduced MPHOSPH1 gene expression in the subject, reduced cancer size, reduced prevalence, or reduced metastatic potential, The treatment is considered "effective." When the treatment is used prophylactically, "effective" means that it delays or prevents the formation of cancer or prevents or reduces the clinical symptoms of cancer. Effectiveness is determined using any method known to be relevant for the diagnosis or treatment of a particular tumor form.

若本發明的方法與組合物在上下文中指出「防止」及「預防」癌症有用,此等用語係在此可互換地意指任何減低由於疾病所致之死亡率或發病率之負擔的活性。防止及預防可發生於「初級、次級及三級防止水平」。初級防止及預防避免發展出疾病,次級及三級防止及預防水平包含目標為防止及預防疾病進展及展現出症狀及藉由回復功能及減少疾病相關併發症以減少已建立的疾病的影響的活性。或者,防止及預防可包括廣泛的療法,其目標係減輕特定病症的嚴重度,例如減少腫瘤的增殖及轉移、減少血管新生。 If the methods and compositions of the present invention indicate that "preventing" and "preventing" cancer are useful in the context, these terms are used interchangeably herein to mean any activity that reduces the burden of mortality or morbidity due to disease. Prevention and prevention can occur at "primary, secondary and tertiary levels of prevention." Primary prevention and prevention prevents the development of disease, and secondary and tertiary prevention and prevention levels include goals to prevent and prevent disease progression and show symptoms and reduce the impact of established diseases by restoring function and reducing disease-related complications. active. Alternatively, prevention and prevention can include a wide range of therapies whose goals are to reduce the severity of a particular condition, such as reducing tumor proliferation and metastasis, and reducing angiogenesis.

本發明上下文中,治療及/或預防癌症及/或防止其術後再發,包括以下任何步驟,例如以外科手術移除癌細胞、抑制癌化細胞的生長、腫瘤退化或回復、誘導緩解及抑制腫瘤發生、腫瘤回復,及減少或抑制轉移。有效的治療及/或預防癌症減少死亡率並改善患癌的個體的預後,減少腫瘤標記物在血液中的水平,並減輕伴隨癌症的可偵測的症狀。例如,減少或改善症狀構成有效治療及/或預防,包括10%、20%、30%或以上減少,或穩定的疾病。 In the context of the present invention, treating and / or preventing cancer and / or preventing its recurrence after surgery includes any of the following steps, such as surgically removing cancer cells, inhibiting the growth of cancerous cells, tumor regression or recovery, inducing remission, and Inhibit tumorigenesis, tumor recovery, and reduce or inhibit metastasis. Effective treatment and / or prevention of cancer reduces mortality and improves the prognosis of individuals with cancer, reduces the levels of tumor markers in the blood, and reduces detectable symptoms that accompany cancer. For example, reducing or improving symptoms constitutes effective treatment and / or prevention, including a 10%, 20%, 30% or more reduction, or stable disease.

如上所述,本發明胜肽誘導的Th1細胞能幫助負責細胞免疫之免疫細胞。此種免疫細胞不僅包括對抗表現MPHOSPH1之癌細胞的CTL,也包括對抗表現其他TAA之癌細胞的CTL,由於由Th1細胞分泌的細胞素能以抗原獨立的方式影響CTL。因此本發明提供一種醫藥試劑或組合物,其包含本發明之胜肽中至少一種。於此醫藥試劑或組合物,此胜肽之量係存在治療上或醫藥上有效量。 As described above, the peptide-induced Th1 cells of the present invention can help immune cells responsible for cellular immunity. Such immune cells include not only CTLs against cancer cells expressing MPHOSPH1, but also CTLs against cancer cells expressing other TAAs, since cytokines secreted by Th1 cells can affect CTLs in an antigen-independent manner. Therefore, the present invention provides a pharmaceutical agent or composition comprising at least one of the peptides of the present invention. In the pharmaceutical agent or composition, the amount of the peptide is a therapeutically or pharmaceutically effective amount.

本發明之醫藥試劑或組合物在幫助、刺激及/或增強任何負責細胞免疫之免疫細胞(例如CTL、巨噬體)為有用,由於本發明之藥試劑或組合物誘 導的Th1細胞能分泌影響任何負責細胞免疫之免疫細胞的細胞素。因此,本發明之試劑或組合物對於任何將由包括CTL之此種免疫細胞媒介的免疫反應予以增強或促進的用途有用。例如因為本發明之試劑或組合物能增強或促進對抗由此等免疫細胞媒介的癌或腫瘤的免疫反應,本發明提供包含至少一種本發明之胜肽的試劑或組合物,以用治療及/或預防癌。此種試劑或組合物中的此胜肽量,可為對於罹有表現MPHOSPH1之癌的對象中顯著增強或刺激免疫反應為有效的量。 The pharmaceutical agent or composition of the present invention is useful in helping, stimulating, and / or enhancing any immune cells (such as CTL, macrophages) responsible for cellular immunity, because the Th1 cells induced by the pharmaceutical agent or composition of the present invention can secrete and affect The cytokine of any immune cell responsible for cellular immunity. Therefore, the agent or composition of the present invention is useful for any use that will enhance or promote an immune response mediated by such an immune cell including CTL. For example, because the agent or composition of the invention can enhance or promote an immune response against cancers or tumors mediated by such immune cells, the invention provides an agent or composition comprising at least one of the peptides of the invention for use in therapy and / Or prevent cancer. The amount of the peptide in such an agent or composition may be an amount effective to significantly enhance or stimulate an immune response in a subject suffering from a cancer expressing MPHOSPH1.

本發明也提供一種試劑或組合物,供增強或刺激由MHC第I類抗原,例如HLA-A2及HLA-A24媒介的免疫反應。於另一具體例,本發明更提供本發明胜肽之用途,以供製造用於增強或刺激由MHC第I類抗原媒介的免疫反應的試劑或組合物。 The invention also provides a reagent or composition for enhancing or stimulating an immune response mediated by MHC class I antigens, such as HLA-A2 and HLA-A24. In another specific example, the present invention further provides the use of the peptide of the present invention for the manufacture of an agent or composition for enhancing or stimulating an immune response mediated by a MHC class I antigen.

於較佳具體例,在本發明內容中鑑別的MPHOSPH1衍生之胜肽可誘導Th1細胞,及對抗MPHOSPH1-表現細胞之CTL。因此本發明也提供包含至少一種本發明胜肽之試劑或組合物,以供用於誘導對抗表現MPHOSPH1之癌或腫瘤的CTL。 In a preferred embodiment, the MPHOSPH1-derived peptides identified in the context of the present invention can induce Th1 cells and counteract CTL of MPHOSPH1-expressing cells. The invention therefore also provides an agent or composition comprising at least one peptide of the invention for use in inducing CTLs against cancers or tumors exhibiting MPHOSPH1.

又,包含至少一種本發明胜肽之試劑或組合物,可用於增強或促進由MHC第II類分子媒介的免疫反應。 In addition, an agent or composition comprising at least one of the peptides of the present invention can be used to enhance or promote the immune response by MHC class II molecular agents.

因為MPHOSPH1表現在一些癌類型中,包括膀胱癌、乳癌和許多其它惡性腫瘤(malignancy),相較於在正常組織中係專一性的提高(WO2006/085684,Nishiu M,et al.,Jpn J Cancer Res 2002;93(8):894-901,Kanehira M,et al.,Cancer Res.2007;67(7):3276-85及本案微陣列分析之數據)(未顯示)),本發明之胜肽或編碼為此胜肽之聚核苷酸,可用於癌或腫瘤之治療及/或預防,及/或用於防止其術後再復發。因此,本發明提供一種醫藥試劑或組合物,供癌或腫瘤之治療及/或供預防,及/或防止其術後再復發,其包含一或多種本發明之胜 肽、或編碼為此胜肽之聚核苷酸,作為有效成分。或者,本發明之胜肽可以被表現在任意前述細胞的表面上,例如APC,以用於作為醫藥試劑或組合物。此外上述Th1細胞也可用於作為本發明之醫藥癌或腫瘤之劑或組合物的有效成分。 Because MPHOSPH1 is manifested in some cancer types, including bladder cancer, breast cancer, and many other malignancy, it is more specific than normal tissues (WO2006 / 085684, Nishiu M, et al., Jpn J Cancer Res 2002; 93 (8): 894-901, Kanehira M, et al., Cancer Res. 2007; 67 (7): 3276-85 and data of microarray analysis in this case) (not shown)), the victory of the present invention The peptide or polynucleotide encoded as the peptide can be used for the treatment and / or prevention of cancer or tumor, and / or for preventing its recurrence after surgery. Therefore, the present invention provides a pharmaceutical agent or composition for the treatment and / or prevention of cancer or tumor, and / or preventing its recurrence after surgery, which comprises one or more peptides of the present invention, or encodes the peptides for this purpose. Polynucleotides of peptides as an active ingredient. Alternatively, the peptides of the present invention can be expressed on the surface of any of the aforementioned cells, such as APC, for use as a pharmaceutical agent or composition. In addition, the above-mentioned Th1 cells can also be used as an active ingredient of a pharmaceutical cancer or tumor agent or composition of the present invention.

於另一具體例,本發明也提供使用有效成分製造供治療癌症或腫瘤的醫藥組合物或藥劑的用途,該有效成分選自以下:(a)本發明之胜肽;(b)以可表現形式編碼為此處揭示的此種胜肽的聚核核酸;(c)在其表面上呈現本發明之胜肽或其片段的APC;及(d)本發明之Th1細胞。 In another specific example, the present invention also provides the use of an active ingredient for the manufacture of a pharmaceutical composition or medicament for treating cancer or tumor, the active ingredient is selected from the following: (a) a peptide of the present invention; Polynucleic acids in the form of such peptides disclosed herein; (c) APCs presenting the peptides or fragments thereof of the invention on their surfaces; and (d) Th1 cells of the invention.

或者本發明更提供一種有效成分,使用於治療癌症或腫瘤,該有效成分選自以下:(a)本發明之胜肽;(b)以可表現形式編碼為此處揭示的此種胜肽的聚核核酸;(c)在其表面上呈現本發明之胜肽或其片段的APC;及(d)本發明之Th1細胞。 Alternatively, the present invention further provides an active ingredient for treating cancer or tumor, the active ingredient is selected from the following: (a) a peptide of the present invention; (b) an expressible form of the peptide encoded by the peptide disclosed herein Polynucleic acids; (c) APCs presenting the peptides or fragments thereof of the invention on their surfaces; and (d) Th1 cells of the invention.

或者本發明更提供製造用於治療癌症或腫瘤的醫藥組合物或試劑的方法或處理,其中該方法或處理包括將醫藥上或生理上可接受的擔體與選自以下的有效成分配製的步驟:(a)本發明之胜肽;(b)以可表現形式編碼為此處揭示的此種胜肽的聚核核酸;(c)在其表面上呈現本發明之胜肽或其片段的APC;及(d)本發明之Th1細胞。 Alternatively, the present invention further provides a method or treatment for manufacturing a pharmaceutical composition or agent for treating cancer or tumor, wherein the method or treatment comprises a step of formulating a pharmaceutically or physiologically acceptable carrier with an active ingredient selected from the following : (A) a peptide of the present invention; (b) a polynucleic acid encoding such a peptide disclosed herein in a formable form; (c) an APC presenting the peptide of the present invention or a fragment thereof on its surface ; And (d) a Th1 cell of the invention.

於另一具體例,本發明也提供製造用於治療癌症或腫瘤的醫藥組合物或試劑的方法或處理,其中該方法或處理包括將有效成分與醫藥上或生理 上可接受的擔體混合的步驟,其中該有效成分選自以下:(a)本發明之胜肽;(b)以可表現形式編碼為此處揭示的此種胜肽的聚核核酸;(c)在其表面上呈現本發明之胜肽或其片段的APC;及(d)本發明之Th1細胞。 In another specific example, the present invention also provides a method or treatment for manufacturing a pharmaceutical composition or agent for treating cancer or tumor, wherein the method or treatment includes mixing an active ingredient with a pharmaceutically or physiologically acceptable carrier. Step, wherein the active ingredient is selected from the following: (a) a peptide of the present invention; (b) a polynucleotide encoding such a peptide disclosed herein in a formable form; (c) presenting the present on its surface APCs of the invention peptides or fragments thereof; and (d) Th1 cells of the invention.

或者,本發明之醫藥組合物或此種試劑可用於預防癌症或腫瘤及預防其術後再發中之一者或兩者。 Alternatively, the pharmaceutical composition or such agent of the present invention can be used for one or both of preventing cancer or tumor and preventing recurrence after surgery.

本發明之醫藥試劑或組合物作為疫苗有用。本發明上下文中,詞彙「疫苗」(也稱為免疫原性組合物),係指經由對動物接種,有誘導抗腫瘤免疫性的功能的組合物。 The pharmaceutical agent or composition of the present invention is useful as a vaccine. In the context of the present invention, the term "vaccine" (also referred to as an immunogenic composition) refers to a composition having the function of inducing antitumor immunity through vaccination of an animal.

本發明之醫藥藥劑或組合物可用於治療及/或預防癌症或腫瘤,及/或預防其在對象或病患中之術後復發或轉移復發。此等對象的例子包括人及其他哺乳動物,包括但不限於小鼠、大鼠、豚鼠、兔、貓、狗、綿羊、山羊、豬、牛、馬、猴、狒狒及黑猩猩,尤其是商業上為重要的動物或家畜。 The pharmaceutical agent or composition of the present invention can be used for treating and / or preventing cancer or tumor, and / or preventing its recurrence or metastatic recurrence in a subject or patient after surgery. Examples of such objects include humans and other mammals, including but not limited to mice, rats, guinea pigs, rabbits, cats, dogs, sheep, goats, pigs, cattle, horses, monkeys, baboons and chimpanzees, especially commercially For important animals or livestock.

本發明中,具有選自序列識別號:1至2中之胺基酸序列的胜肽,已發現係由數種HLA-DR及/或HLA-DP分子(例如HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9)限制的混雜的Th1細胞抗原決定位,且可作為能誘導有效且專一性的對抗由於MHC第II類分子媒介的免疫反應之癌症的免疫反應的候選者。因此包括具有序列識別號:1至2之胺基酸序列的此等胜肽中的任一者的本發明的醫藥試劑或組合物,特別適於對於至少具有選自HLA-DRDP2、HLA-DP5、HLA-DR4及HLA-DR9中作為MHC第II類分子的對象來投予。對於包含編碼為此等胜肽中任一者的聚核苷酸的醫藥藥劑或組合物也同樣適用。 In the present invention, a peptide having an amino acid sequence selected from sequence identification numbers: 1 to 2 has been found to be composed of several HLA-DR and / or HLA-DP molecules (for example, HLA-DP2, HLA-DP5, HLA-DR4 and HLA-DR9) restricted hybrid Th1 cell epitopes and can be used as candidates for inducing an immune response that is effective and specific against cancer due to the immune response of MHC class II molecular mediators. The pharmaceutical agent or composition of the present invention thus comprising any one of these peptides having an amino acid sequence of SEQ ID NO: 1 to 2 is particularly suitable for having at least one selected from the group consisting of HLA-DRDP2, HLA-DP5 , HLA-DR4 and HLA-DR9 are administered as targets of MHC class II molecules. The same applies to a pharmaceutical agent or composition containing a polynucleotide encoding any of these peptides.

或者於較佳具體例,本發明鑑別之胜肽,當施用到具有HLA-A2或HLA-A24之對象時,也可誘導對於MPHOSPH1專一之CTL。因此藉由投予本 發明之胜肽,可更預期除了Th1細胞誘導外,可誘導對抗表現MPHOSPH1之癌的CTL反應。又,本發明之胜肽不僅經由將其處理而誘導對抗MPHOSPH1-表現細胞之CTL反應,也藉由因其為媒介之Th1細胞誘導而增強之。因此為了達成在同一對象中誘導Th1細胞及MPHOSPH1-專一性CTL兩者,例如當投予具有序列識別號:1之胺基酸序列之胜肽時,例如欲治療的對象宜具有HLA-DR9、HLA-DP5或HLA-DR4作為MHC第II類分子及HLA-A2或HLA-A24作為MHC第I類分子。 Or in a preferred embodiment, the peptide identified by the present invention can induce a CTL specific to MPHOSPH1 when administered to a subject having HLA-A2 or HLA-A24. Therefore, by administering the peptide of the present invention, in addition to the induction of Th1 cells, it is expected that a CTL response against cancers expressing MPHOSPH1 can be induced. In addition, the peptide of the present invention not only induces a CTL response against MPHOSPH1-expressing cells by treating it, but also enhances it by induction of Th1 cells as a medium. Therefore, in order to achieve the induction of both Th1 cells and MPHOSPH1-specific CTLs in the same subject, for example, when administering a peptide having an amino acid sequence of sequence identification number: 1, for example, the subject to be treated should have HLA-DR9, HLA-DP5 or HLA-DR4 as MHC class II molecules and HLA-A2 or HLA-A24 as MHC class I molecules.

在本發明中,已證實本發明的胜肽會促進由MHC第II類抗原媒介的免疫反應,特別是在以如下所示HLA類型限制之方法組合中: In the present invention, it has been demonstrated that the peptides of the present invention promote an immune response mediated by MHC class II antigens, particularly in a combination of methods restricted by the type of HLA shown below:

MPHOSPH1-LP1:HLA-DR9、HLA-DP5及HLA-DR4 MPHOSPH1-LP1: HLA-DR9, HLA-DP5, and HLA-DR4

MPHOSPH1-LP2:HLA-DR4及HLA-DP2 MPHOSPH1-LP2: HLA-DR4 and HLA-DP2

因此,MPHOSPH1-LP1及-LP2及包含序列辨識號:1至2之任何一胺基酸序列之胜肽有利於治療在病患身上表現MPHOSPH1的癌症,該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,其顯示於上述組合中。或者,本發明提供用以治療在病患身上表現MPHOSPH1的癌症之醫藥組合物,其中該組合物包括選自於由本發明的胜肽構成的群組中任何一種胜肽,且其中該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,其顯示於上述組合中。 Therefore, MPHOSPH1-LP1 and -LP2 and a peptide comprising any of the amino acid sequences of sequence identification numbers: 1 to 2 are beneficial for the treatment of cancer that expresses MPHOSPH1 in a patient having at least one HLA dual gene selected from The corresponding HLA subtype for this peptide is shown in the above combination. Alternatively, the present invention provides a pharmaceutical composition for treating a cancer expressing MPHOSPH1 in a patient, wherein the composition includes any one peptide selected from the group consisting of the peptides of the present invention, and wherein the patient has At least one HLA dual gene is selected from the corresponding HLA subtype of the peptide, which is shown in the above combination.

此外,本發明也提供一種胜肽的用途,該胜肽選自於由本發明之胜肽構成之群組,其係製造用以治療在病患身上表現MPHOSPH1之癌症的組合物,該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,其顯示於上述組合中。此外,於一些具體例,本發明提供一種胜肽,其係選自於由本發明之胜肽構成之群組,用以治療在病患身上表現MPHOSPH1之癌症,該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,其顯示於上述組合中。於其他具體例,本發明提供一種治療在病患身上表現MPHOSPH1之癌症的方 法,包括對該病患投予選自於由本發明之胜肽構成的群組中之一胜肽的步驟,其中該病患具有至少一HLA對偶基因選自於上述組合中該胜肽相應的HLA亞型。 In addition, the present invention also provides the use of a peptide selected from the group consisting of the peptide of the present invention, which is a composition for treating a cancer that expresses MPHOSPH1 in a patient, the patient having At least one HLA dual gene is selected from the corresponding HLA subtype of the peptide, which is shown in the above combination. In addition, in some specific examples, the present invention provides a peptide, which is selected from the group consisting of the peptide of the present invention, and is used to treat cancers that express MPHOSPH1 in patients with at least one HLA dual gene. It is selected from the corresponding HLA subtype of the peptide, which is shown in the above combination. In other specific examples, the present invention provides a method for treating cancer expressing MPHOSPH1 in a patient, comprising the step of administering to the patient a peptide selected from the group consisting of the peptides of the present invention, wherein the disease A patient with at least one HLA dual gene is selected from the corresponding HLA subtype of the peptide in the above combination.

此外,於一些具體例,本發明提供一種製造或配製醫藥組合物的方法,用以治療在病患身上表現MPHOSPH1之癌症,其中該組合物包括選自於由本發明之胜肽構成的群組中之任何一胜肽,且其中該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,其顯示於上述組合中。本發明的方法,例如,可包括混合(admixing)或配製選自於由本發明之胜肽構成的群組中之任何一胜肽,及醫藥上可接受的擔體。 In addition, in some specific examples, the present invention provides a method for manufacturing or formulating a pharmaceutical composition for treating a cancer expressing MPHOSPH1 in a patient, wherein the composition is selected from the group consisting of a peptide of the present invention Any one of the peptides, and wherein the patient has at least one HLA dual gene selected from the corresponding HLA subtype of the peptide, which is shown in the above combination. The method of the present invention, for example, may include admixing or formulating any one peptide selected from the group consisting of the peptides of the present invention, and a pharmaceutically acceptable carrier.

如上述討論的,已知Th1細胞對於在具有腫瘤(tumor-bearing)的宿主誘導有效的腫瘤免疫性是重要的。本發明之胜肽依HLA限制之方式具有Th1細胞的誘導能力,本發明每一個胜肽的專一性HLA限制模式(restriction pattern)顯示如上。所以,本發明提供一種組合物以在表現MPHOSPH1之癌症的病患身上促進或增強Th1細胞反應,其中該組合物包括選自於由本發明之胜肽構成的群組中之任何一胜肽,且其中該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,顯示如上。 As discussed above, it is known that Th1 cells are important for inducing effective tumor immunity in a host with tumor-bearing. The peptides of the present invention have the ability to induce Th1 cells in a HLA-restricted manner, and the specific HLA restriction pattern of each peptide of the present invention is shown above. Therefore, the present invention provides a composition for promoting or enhancing a Th1 cell response in a patient expressing cancer of MPHOSPH1, wherein the composition includes any one peptide selected from the group consisting of the peptides of the present invention, and The patient has at least one HLA dual gene selected from the corresponding HLA subtype of the peptide, as shown above.

此外,本發明也提供一種胜肽的用途,該胜肽選自於由本發明之胜肽構成的群組,其係用以製造一組合物以在表現MPHOSPH1之癌症的病患身上促進或增強Th1細胞反應,該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,顯示於上述組合中。此外,於一些具體例,本發明提供一胜肽選自於由本發明之胜肽構成的群組,其係用以在表現MPHOSPH1之癌症的病患身上促進或增強Th1細胞反應,該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,顯示於上述組合中。於其他具體例,本發明提供一種在表現MPHOSPH1之癌症的病患身上促進或增強Th1細胞反應的方法,該方法包括對該 病患投予選自於由本發明之胜肽構成的群組中之一胜肽,其中該病患具有至少一HLA對偶基因選自於上述組合中該胜肽相應的HLA亞型。 In addition, the present invention also provides the use of a peptide selected from the group consisting of the peptides of the present invention, which is used to make a set of compounds to promote or enhance Th1 in patients with cancer expressing MPHOSPH1. Cell response. The patient has at least one HLA dual gene selected from the corresponding HLA subtype of the peptide, which is shown in the above combination. In addition, in some specific examples, the present invention provides a peptide selected from the group consisting of the peptides of the present invention, which is used to promote or enhance the Th1 cell response in patients with cancer expressing MPHOSPH1. The patient has At least one HLA dual gene is selected from the corresponding HLA subtype of the peptide and is shown in the above combination. In other specific examples, the present invention provides a method for promoting or enhancing a Th1 cell response in a patient expressing a cancer of MPHOSPH1, the method comprising administering to the patient one selected from the group consisting of a peptide of the present invention A peptide, wherein the patient has at least one HLA dual gene selected from the corresponding HLA subtype of the peptide in the above combination.

此外,於一些具體例,本發明提供一種製造或配製在表現MPHOSPH1之癌症的病患身上促進或增強Th1細胞反應的醫藥組合物的方法,其中該組合物包括選自於由本發明之胜肽構成的群組中之任何一胜肽,且其中該病患具有至少一HLA對偶基因選自於該胜肽相應的HLA亞型,顯示於上述組合中。本發明的方法,例如,可包括混合(admixing)或配製選自於由本發明之胜肽構成的群組中之任何一胜肽,及醫藥上可接受的擔體。 In addition, in some specific examples, the present invention provides a method for manufacturing or formulating a pharmaceutical composition that promotes or enhances a Th1 cell response in a patient expressing a cancer of MPHOSPH1, wherein the composition includes a compound selected from the group consisting of a peptide of the present invention Any one of the peptides in the group, and wherein the patient has at least one HLA dual gene selected from the corresponding HLA subtype of the peptide, is shown in the above combination. The method of the present invention, for example, may include admixing or formulating any one peptide selected from the group consisting of the peptides of the present invention, and a pharmaceutically acceptable carrier.

於另一具體例,本發明提供依存於Th1細胞誘導之癌免疫療法。本發明提供之此治療策略可應用且有用於任何獨立於MPHOSPH1表現之癌,只要由Th1細胞分泌的細胞素所活化的免疫細胞係以對象癌細胞為目標。 In another embodiment, the present invention provides a cancer immunotherapy induced by Th1 cells. The treatment strategy provided by the present invention is applicable and applicable to any cancer that is independent of MPHOSPH1 expression, as long as the immune cell line activated by cytokines secreted by Th1 cells targets cancer cells of the subject.

本發明之醫藥試劑或組合物欲治療的癌或腫瘤包括表現MPHOSPH1之任何種類之癌症或腫瘤,包括但不限於,例如膀胱癌及乳癌。 The cancer or tumor to be treated by the pharmaceutical agent or composition of the present invention includes any kind of cancer or tumor exhibiting MPHOSPH1, including but not limited to, for example, bladder cancer and breast cancer.

本發明之醫藥試劑或組合物,除了含有上述有效成分,也可含有其他有能力誘導Th1細胞或CTL之胜肽、其他編碼為其他胜肽之聚核苷酸、呈現其他胜肽或其片段之其他細胞等。此種具有誘導Th1細胞或CTL之能力的「其他」胜肽的例子,包括但不限於源自癌專一性抗原(例如已鑑別之TAA)的胜肽。 The pharmaceutical agent or composition of the present invention, in addition to the above-mentioned active ingredients, may also contain other peptides capable of inducing Th1 cells or CTLs, other polynucleotides encoded as other peptides, and other peptides or fragments thereof. Other cells etc. Examples of such "other" peptides having the ability to induce Th1 cells or CTLs include, but are not limited to, peptides derived from cancer-specific antigens, such as identified TAAs.

若需要,本發明之醫藥試劑或組合物可視情形包括其他治療物質當作額外之有效成分,只要該物質不會抑制該有效成分例如本發明胜肽中任一者的抗腫瘤作用即可。例如,配方可包括抗發炎試劑、止痛劑、化學療劑等。除了在藥劑本身當中的其他治療物質,本發明的藥劑也可依序或同時投予一種或更多其他藥理試劑。藥劑及藥理組合物的量,取決於例如使用的藥理試劑的形式、欲治的疾病及投予的時程及路徑。 If necessary, the pharmaceutical agent or composition of the present invention may include other therapeutic substances as additional effective ingredients, as long as the substance does not inhibit the antitumor effect of the effective ingredients such as any of the peptides of the present invention. For example, the formulation may include anti-inflammatory agents, analgesics, chemotherapeutics, and the like. In addition to other therapeutic substances in the medicament itself, the medicament of the present invention may also be administered sequentially or simultaneously with one or more other pharmacological agents. The amount of the medicament and pharmacological composition depends on, for example, the form of the pharmacological agent used, the disease to be treated, and the time course and route of administration.

該技術領域中具有通常知識者應了解除了此處特別提及的成分 以外,本發明之醫藥試劑或組合物可包括在該技術領域中常見關於配方形式使用的其他試劑(例如,填料、黏結劑、稀釋劑、賦形劑者)。 Those having ordinary knowledge in the technical field should understand that in addition to the ingredients specifically mentioned herein, the pharmaceutical agent or composition of the present invention may include other agents (e.g., fillers, binders) commonly used in the form of formulations in this technical field , Diluents, excipients).

本發明之一具體例中,該醫藥試劑或組合物可包裝在製造品與套組中,該套組含有治療欲治療的疾病例如癌症的致病情形的有用的物質。製造品可包括附有標記的任意該醫藥試劑或組合物的容器。適當的容器包括瓶、小玻璃瓶及試管。該容器可由各種材料形成,例如玻璃或塑膠。容器上的標記必需指示該試劑係用於治療或預防該疾病的一種以上的病況。該標記也可顯示投予指示等。 In one embodiment of the present invention, the pharmaceutical agent or composition may be packaged in an article of manufacture and a kit, the kit containing a substance useful for treating a disease-causing condition such as cancer . The article of manufacture may include a container of any such pharmaceutical agent or composition with a label. Suitable containers include bottles, vials and test tubes. The container can be formed from a variety of materials, such as glass or plastic. The marking on the container must indicate that the agent is used to treat or prevent more than one condition of the disease. This mark may also indicate an administration instruction or the like.

除了上述容器以外,包含本發明的醫藥試劑或組合物的套組可以視情形更包括第二容器,其盛裝醫藥上可容許的稀釋劑。從商業及使用者所需角度,可更包括其他材料,包括其他緩衝液、稀釋劑、濾器、針、針筒及使用指示之包裝插入物。 In addition to the above container, the kit containing the pharmaceutical agent or composition of the present invention may optionally include a second container containing a pharmaceutically acceptable diluent. From the perspective of business and user needs, it can also include other materials, including other buffers, diluents, filters, needles, syringes, and packaging inserts for use instructions.

該醫藥組合物視需要,可放在包裝或分配裝置中,其可包含一種或更多含有該有效成分的單位的劑量。該包裝例如包括金屬或塑膠箔,例如泡殼包裝。該包裝或分配裝置可以隨附投予指示。 The pharmaceutical composition may be placed in a packaging or a dispensing device as necessary, and it may contain a dose of one or more units containing the active ingredient. The package comprises, for example, metal or plastic foil, such as a blister pack. The packaging or dispensing device may be accompanied by dosing instructions.

(1)含有該胜肽當做有效成分之醫藥試劑或組合物: (1) A pharmaceutical agent or composition containing the peptide as an active ingredient:

本發明之胜肽可直接當做醫藥試劑或組合物投予,或若需要以習知配製方法配製。於後者,除了本發明之胜肽,可適當使用通常使用於藥物的擔體、賦形劑等而無特殊限制。此等擔體的例子包括,但不限於無菌水、生理鹽液、磷酸鹽緩衝液、培養液等。再者該醫藥試劑或組合物視需要可包含安定劑、懸浮劑、保存劑、界面活性劑等。本發明之醫藥藥劑或組合物可用於抗癌症用途。 The peptides of the present invention can be administered directly as a pharmaceutical agent or composition, or can be formulated by conventional formulation methods if necessary. In the latter, in addition to the peptide of the present invention, carriers, excipients, etc. which are generally used in medicine can be appropriately used without particular limitation. Examples of such carriers include, but are not limited to, sterile water, physiological saline, phosphate buffered saline, culture fluid, and the like. Furthermore, the pharmaceutical agent or composition may include a stabilizer, a suspending agent, a preservative, a surfactant, and the like, as necessary. The pharmaceutical agent or composition of the present invention can be used for anti-cancer applications.

本發明之胜肽可組合製備成包括兩種或更多本發明之胜肽,以在體內誘導Th1細胞。該胜肽組合可採混合(雞尾酒)形式或使用標準技術彼此接合。例如,該胜肽可以化學連結或表現成單一融合的多胜肽序列。該組合中的 胜肽可相同或不同。 The peptides of the present invention can be prepared in combination to include two or more peptides of the present invention to induce Th1 cells in vivo. The peptide combination can be in mixed (cocktail) form or joined to each other using standard techniques. For example, the peptide can be chemically linked or represented as a single fused polypeptide sequence. The peptides in this combination can be the same or different.

藉由投予本發明之胜肽,該胜肽或其片段藉由該HLA第II類抗原在APC以高密度呈現,然後誘導對於由該呈現的胜肽與該HLA第II類抗原之間形成的複合體為專一性反應的Th1細胞。或者從對象移出APC(例如DC)然後以本發明之胜肽刺激以獲得在其細胞表面呈現任何本發明之胜肽或其片段的APC。此等APC再度對該對象投予以在該對象中誘導Th1細胞,結果可增加對於腫瘤關聯內皮的侵犯。 By administering the peptide of the present invention, the peptide or a fragment thereof is presented at a high density at the APC by the HLA class II antigen, and then the formation between the present peptide and the HLA class II antigen is induced. The complex is a Th1 cell that specifically responds. Alternatively, the APC (eg, DC) is removed from the subject and then stimulated with a peptide of the invention to obtain an APC that presents any of the peptides or fragments of the invention on its cell surface. These APCs were once again administered to the subject to induce Th1 cells in the subject, with the result that the invasion of tumor-associated endothelium can be increased.

包括本發明之胜肽當做有效成分之該用於癌症或腫瘤之治療及/或預防的醫藥試劑或組合物,也可包括已知使細胞免疫有效建立之佐劑。或此醫藥試劑或組合物可以與其他有效成分一起投予,且可藉由配製為顆粒投予。佐劑意指當與具有免疫學活性的蛋白質一起(或連續)投予時,會增強對於蛋白質的免疫反應的一化合物。於此考慮的佐劑包括文獻中敘述者(Clin Microbiol Rev 1994,7:277-89)。適合之佐劑的例子包括但不限於磷酸鋁、氫氧化鋁、明礬、霍亂毒素、沙門毒素、不完全的佛氏佐劑(Incomplete Freund's adjuvant,IFA)、完全的佛氏佐劑(Complete Freund's adjuvant,CFA)、ISCOMatrix、GM-CSF、CpG、O/W乳劑、或其類似物。 The pharmaceutical agent or composition for the treatment and / or prevention of cancer or tumor comprising the peptide of the present invention as an active ingredient may also include an adjuvant known to effectively establish cellular immunity. Or this pharmaceutical agent or composition can be administered together with other active ingredients, and can be administered by granulation. An adjuvant means a compound that, when administered together (or continuously) with a protein having immunological activity, enhances the immune response to the protein. Adjuvants considered here include those described in the literature (Clin Microbiol Rev 1994, 7: 277-89). Examples of suitable adjuvants include, but are not limited to, aluminum phosphate, aluminum hydroxide, alum, cholera toxin, salmonella toxin, Incomplete Freund's adjuvant (IFA), Complete Freund's adjuvant , CFA), ISCOMatrix, GM-CSF, CpG, O / W emulsion, or the like.

再者,可便利地使用微脂體配方、顆粒配方其中該胜肽結合於數微米直徑的珠粒、及脂質結合於該胜肽的配方。 Furthermore, a microlipid formulation, a granule formulation in which the peptide is bound to beads having a diameter of several micrometers, and a formulation in which the peptide is bound to the peptide can be conveniently used.

於本發明另一具體例,本發明之胜肽也可以於醫藥上可接受的鹽的形式投予。較佳的鹽的例子包括與鹼金屬的鹽、與金屬的鹽、與有機鹼的鹽、與有機酸(例如乙酸、甲酸、丙酸、富馬酸、馬來酸、琥珀酸、酒石酸、檸檬酸、蘋果酸、草酸、苯甲酸、甲烷磺酸等)的鹽及與無機酸(例如鹽酸、磷酸、氫溴酸、硫酸等)的鹽。在此使用之用語「醫藥上可接受之鹽」係指保留該化合物之生物學效力以及性質且可藉由與無機酸或鹼例如鹽酸、氫溴酸、硫酸、硝酸、磷酸、 甲烷磺酸、乙烷磺酸、對甲苯磺酸、水楊酸等反應而獲得之鹽。 In another embodiment of the present invention, the peptide of the present invention can also be administered in the form of a pharmaceutically acceptable salt. Examples of preferred salts include salts with alkali metals, salts with metals, salts with organic bases, and organic acids such as acetic acid, formic acid, propionic acid, fumaric acid, maleic acid, succinic acid, tartaric acid, lemon Acid, malic acid, oxalic acid, benzoic acid, methanesulfonic acid, etc.) and salts with inorganic acids (eg, hydrochloric acid, phosphoric acid, hydrobromic acid, sulfuric acid, etc.). The term "pharmaceutically acceptable salt" as used herein means that the biological potency and properties of the compound are retained and can be obtained by contact with an inorganic acid or base such as hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, methanesulfonic acid, Salt obtained by the reaction of ethanesulfonic acid, p-toluenesulfonic acid, salicylic acid, etc.

於一些實施例,本發明之醫藥試劑或組合物可更包括會起動(primes)Th1細胞,且選擇性起動CTL的成分。脂質已鑑別係能夠於體內起動對抗病毒抗原的Th1細胞,選擇性起動CTL的試劑。例如可將棕櫚酸殘基附著在離胺酸殘基的ε-及α-胺基然後連結到本發明之胜肽。然後可將該脂質化的胜肽直接以微胞或微粒投予、包入微脂體或於佐劑中乳化而投予。另一例的脂質起動Th1細胞且選擇性地起動CTL反應,當共價附著於一適當胜肽時,可使用E.coli脂蛋白,例如三棕櫚醯基-S-甘胺醯基半胱胺醯基-絲胺醯基-絲胺酸(P3CSS)可起動(prime)Th1細胞且選擇性起動CTL(參見例如Deres et al.,Nature 1989,342:561-4)。 In some embodiments, the pharmaceutical agent or composition of the present invention may further include a component that primes Th1 cells and selectively activates CTL. Lipids have been identified as agents capable of activating Th1 cells against viral antigens in vivo and selectively activating CTL agents. For example, a palmitic acid residue can be attached to the ε- and α-amino groups of an lysine residue and then linked to the peptide of the present invention. The lipidated peptide can then be administered directly as microcells or microparticles, encapsulated in microliposomes, or emulsified in an adjuvant. Another example of lipids activates Th1 cells and selectively initiates CTL reactions. When covalently attached to an appropriate peptide, E. coli lipoproteins, such as tripalmitinyl-S-glycolamine cysteamine, can be used. Pyro-seramine-serine (P3CSS) primes Th1 cells and selectively activates CTLs (see, eg, Deres et al. , Nature 1989, 342: 561-4).

適當的投予方法的例子可包括,但不限於口服、皮內、真皮下、肌肉內、髓內、腹膜、靜脈內注射等,及全身性投予或對於目標部位的鄰近處局部投予(即直接注射)。該投予可藉由單一投予或以多次投予追加實施。可將醫藥上或治療上有效量之本發明之此胜肽對於須要治療表現MPHOSPH1之癌症的對象投予。或者可將足以增強或刺激由Th1細胞媒介之免疫反應及/或誘導對抗表達MPHOSPH1之癌症或腫瘤之CTL的本發明胜肽,對於罹患表現MPHOSPH1之癌症的對象投予。本發明之胜肽的劑量可取決於欲治療的疾病、病患年紀及體重、投予方法等適當調整。胜肽的劑量通常可為0.001mg至1,000mg,例如0.01mg至100mg,例如0.1mg至10mg,例如0.5mg至5mg,且可數天至數月投予一次該胜肽。該技術領域中具有通常知識者可容易地選擇適當且最適的劑量。 Examples of suitable methods of administration may include, but are not limited to, oral, intradermal, subdermal, intramuscular, intramedullary, peritoneal, intravenous, etc., and systemic administration or local administration in the vicinity of the target site ( Ie direct injection). This administration may be implemented by a single administration or by multiple administrations. A pharmaceutical or therapeutically effective amount of this peptide of the present invention can be administered to a subject in need of treatment for a cancer that manifests MPHOSPH1. Alternatively, the peptides of the present invention sufficient to enhance or stimulate the immune response mediated by Th1 cells and / or induce CTLs against cancers or tumors expressing MPHOSPH1 can be administered to subjects suffering from cancers expressing MPHOSPH1. The dose of the peptide of the present invention can be appropriately adjusted depending on the disease to be treated, the age and weight of the patient, the method of administration, and the like. The dosage of the peptide may generally be 0.001 mg to 1,000 mg, such as 0.01 mg to 100 mg, such as 0.1 mg to 10 mg, such as 0.5 mg to 5 mg, and the peptide may be administered once a few days to several months. Those skilled in the art can easily select an appropriate and optimum dose.

(2)含有聚核苷酸當做有效成分的醫藥試劑或組合物: (2) Pharmaceutical reagent or composition containing polynucleotide as an active ingredient:

本發明之醫藥試劑或組合物也可以可表現形式包括編碼為在此揭露的胜肽的聚核核酸。在此用詞「於可表現的形式」意指當聚核苷酸導入細胞中時,會在體內表現為誘導抗腫瘤免疫性的多胜肽。於說明的具體例中,關注的聚核苷酸的核酸序列包括表現該聚核苷酸需要的調節要素。該聚核苷酸可裝備有助於 達到在目標細胞的基因體中穩定插入的序列(參見例如Thomas KR & Capecchi MR,Cell 1987,51:503-12 for a description of homologous recombination cassette vectors。亦參見例如Wolff et al.,Science 1990,247:1465-8;美國專利號碼5,580,859;5,589,466;5,804,566;5,739,118;5,736,524;5,679,647;and WO 98/04720),DNA-為主的運送技術的例子包括「裸DNA」、經促進的(普寧卡因(bupivacaine)、聚合物、胜肽-媒介的)運送、陽離子性脂質複合體及微粒媒介的(「基因槍」)或壓力媒介的運送(參見例如美國專利號碼5,922,687)。 The pharmaceutical agent or composition of the present invention may also include, in the form of expression, a polynucleotide encoding a peptide disclosed herein. The term "in expressable form" herein means that when a polynucleotide is introduced into a cell, it will appear in vivo as a polypeptide that induces antitumor immunity. In the specific example described, the nucleic acid sequence of the polynucleotide of interest includes regulatory elements required to express the polynucleotide. The polynucleotide can be equipped with sequences that help achieve stable insertion in the genome of the target cell (see, eg, Thomas KR & Capecchi MR, Cell 1987, 51: 503-12 for a description of homologous recombination cassette vectors. See also For example, Wolff et al. , Science 1990, 247: 1465-8; U.S. Patent Nos. 5,580,859; 5,589,466; 5,804,566; 5,739,118; 5,736,524; 5,679,647; and WO 98/04720), examples of DNA-based delivery technologies include "naked DNA ", Facilitated (bupivacaine, polymer, peptide-mediated) delivery, cationic lipid complexes and particulate-based delivery (" gene gun ") or pressure delivery (see, e.g., U.S. Patent No. 5,922,687).

本發明之胜肽也可藉由病毒或細菌載體表現。表現載體的例子包括減毒病毒宿主,例如牛痘或禽痘。此方法涉及使用牛痘病毒,例如當作載體以表現編碼為該胜肽的核苷酸序列。藉由導入宿主中,該重組牛痘病毒會表現該免疫產生性胜肽,且因而引起免疫反應。有用於免疫實驗步驟的牛痘載體與方法敘述於例如美國專利號碼4,722,848。另一載體為BCG(Bacille Calmette Guerin)。BCG載體敘述於Stover et al.,Nature 1991,351:456-60。廣泛種類之其他有用於治療性投予或免疫的載體例如腺病毒及腺病毒相關的病毒載體、反轉錄病毒載體、傷寒載體、去毒炭疽毒素載體等是顯而易見。參見例如Shata et al.,Mol Med Today 2000,6:66-71;Shedlock et al.,J Leukoc Biol 2000,68:793-806;Hipp et al.,In Vivo 2000,14:571-85。 The peptides of the invention can also be expressed by viral or bacterial vectors. Examples of expression vectors include attenuated virus hosts, such as cowpox or fowlpox. This method involves using vaccinia virus, for example, as a vector to express a nucleotide sequence encoded as the peptide. By introduction into a host, the recombinant vaccinia virus will exhibit the immune-producing peptide and thus cause an immune response. Vaccinia vectors and methods useful in immunoassay procedures are described, for example, in U.S. Patent No. 4,722,848. Another carrier is BCG (Bacille Calmette Guerin). BCG vectors are described in Stover et al. , Nature 1991, 351: 456-60. A wide variety of other vectors useful for therapeutic administration or immunization, such as adenovirus and adenovirus-associated viral vectors, retroviral vectors, typhoid vectors, detoxifying anthrax toxin vectors, and the like are apparent. See, for example, Shata et al. , Mol Med Today 2000, 6: 66-71; Shedlock et al. , J Leukoc Biol 2000, 68: 793-806; Hipp et al. , In Vivo 2000, 14: 571-85.

將聚核苷酸運送到病患可為直接進行,於此情形使病患直接暴露於攜帶聚核苷酸的載體,或間接進行,於此情形先使細胞以關注的聚核苷酸於體外轉形,然後將該細胞移殖到對象中。此兩種方法各已知為體內及生物體外基因療法。 Delivery of the polynucleotide to the patient can be performed directly, in which case the patient is directly exposed to the carrier carrying the polynucleotide, or indirectly, in which case the cell is first exposed to the polynucleotide of interest in vitro Transform and then transplant the cells into a subject. These two methods are each known as in vivo and in vitro gene therapy.

針對基因治療的方法的一般評論,參見Goldspiel et al.,Clinical Pharmacy 1993,12:488-505;Wu and Wu,Biotherapy 1991,3:87-95;Tolstoshev,Ann Rev Pharmacol Toxicol 1993,33:573-96;Mulligan,Science 1993,260:926-32; Morgan & Anderson,Ann Rev Biochem 1993,62:191-217;Trends in Biotechnology 1993,11(5):155-215。可適用於本發明該技術領域中普通已知的的重組DNA技術的方法,敘述於Ausubel et al.,in Current Protocols in Molecular Biology,John Wiley & Sons,NY,1993;及Krieger,in Gene Transfer and Expression,A Laboratory Manual,Stockton Press,NY,1990。 For a general review of methods for gene therapy, see Goldspiel et al. , Clinical Pharmacy 1993, 12: 488-505; Wu and Wu, Biotherapy 1991, 3: 87-95; Tolstoshev, Ann Rev Pharmacol Toxicol 1993, 33: 573- 96; Mulligan, Science 1993, 260: 926-32; Morgan & Anderson, Ann Rev Biochem 1993, 62: 191-217; Trends in Biotechnology 1993, 11 (5): 155-215. Methods applicable to recombinant DNA technology commonly known in the technical field of the present invention are described in Ausubel et al. , In Current Protocols in Molecular Biology, John Wiley & Sons, NY, 1993; and Krieger, in Gene Transfer and Expression, A Laboratory Manual, Stockton Press, NY, 1990.

如同胜肽的投予,聚核苷酸的投予方法可為口服、皮內、真皮下、髓內、腹腔的及/或靜脈內注射等,且全身性投予或對於目標部位的鄰近處局部投予係有用。該投予可藉由單一投予或以多次投予追加實施。可將醫藥上或治療上有效量之本發明之此聚核苷酸對於須要治療表現MPHOSPH1之癌症的對象投予。或者可將足以增強或刺激由Th1細胞中介之免疫反應及/或誘導對抗表達MPHOSPH1之癌症或腫瘤之CTL的本發明聚核苷酸,對於罹患表現MPHOSPH1之癌症的對象投予。於適合擔體或經編碼為本發明胜肽的聚核苷酸轉形的細胞中的聚核苷酸的劑量可取決於欲治療的疾病、病患年紀及體重、投予方法等適當調整。胜肽的劑量通常可為0.001mg至1,000mg,例如0.01mg至100mg,例如0.1mg至10mg,例如,0.5mg至5mg,且可數天至數月投予一次該胜肽。該技術領域中具有通常知識者可輕易選擇適當及最適的劑量。 As with peptide administration, polynucleotides can be administered orally, intradermally, subdermally, intramedullarily, intraperitoneally, and / or intravenously, etc., and administered systemically or in the vicinity of the target site Local administration is useful. This administration may be implemented by a single administration or by multiple administrations. A pharmaceutically or therapeutically effective amount of this polynucleotide of the present invention can be administered to a subject in need of treatment for a cancer exhibiting MPHOSPH1. Alternatively, a polynucleotide of the present invention sufficient to enhance or stimulate an immune response mediated by Th1 cells and / or induce CTL against a cancer or tumor expressing MPHOSPH1 may be administered to a subject suffering from a cancer expressing MPHOSPH1. The dosage of the polynucleotide in a cell suitable for a carrier or a cell transformed with a polynucleotide encoding a peptide of the present invention can be appropriately adjusted depending on the disease to be treated, the age and weight of the patient, the method of administration, and the like. The dosage of the peptide may generally be 0.001 mg to 1,000 mg, such as 0.01 mg to 100 mg, such as 0.1 mg to 10 mg, such as 0.5 mg to 5 mg, and the peptide may be administered once a few days to several months. Those skilled in the art can easily select an appropriate and optimum dosage.

IX.使用該胜肽、APC或Th1細胞的方法 IX. Method for using the peptide, APC or Th1 cells

本發明之胜肽及編碼為此胜肽之聚核苷酸可用於誘導本發明之APC及Th1細胞。本發明之APC也可用於誘導本發明之Th1細胞。該胜肽、聚核苷酸及APC可與其他任何化合物組合使用,只要該額外的化合物不會抑制Th1細胞誘導能力即可。因此任意上述本發明之醫藥試劑或組合物可用於誘導Th1細胞,此外,可用於誘導APC的包括本發明之該胜肽或聚核苷酸說明如下。 The peptide of the present invention and a polynucleotide encoded by the peptide can be used to induce APC and Th1 cells of the present invention. The APC of the present invention can also be used to induce Th1 cells of the present invention. The peptide, polynucleotide, and APC can be used in combination with any other compound as long as the additional compound does not inhibit the Th1 cell inducing ability. Therefore, any of the above-mentioned pharmaceutical agents or compositions of the present invention can be used to induce Th1 cells. In addition, the peptides or polynucleotides of the present invention that can be used to induce APC are described below.

(1)誘導抗原呈現細胞(APC)的方法: (1) Method for inducing antigen-presenting cells (APC):

本發明提供使用本發明之胜肽或編碼為此胜肽之聚核苷酸誘導APC的方 法。誘導APC可如上述項目「V.抗原呈現細胞」般實施。本發明也提供一種誘導具有Th1細胞誘導能力之APC之方法,此誘導也已在上述項目「V.抗原呈現細胞」中提及過。 The present invention provides a method for inducing APC using the peptide of the present invention or a polynucleotide encoding the peptide. Induction of APC can be performed as described in the above item "V. Antigen-presenting cells". The present invention also provides a method for inducing APCs having the ability to induce Th1 cells, and this induction has also been mentioned in the above-mentioned item "V. Antigen-presenting cells".

或者,本發明提供提供製備具有誘導Th1細胞之能力的APC之方法,其中此方法可包括以下步驟之一:(a)使本發明胜肽於體外、生物體外或體內與APC接觸;及(b)將編碼為本發明胜肽之聚核苷酸導入到APC中。 Alternatively, the present invention provides a method for preparing APC having the ability to induce Th1 cells, wherein the method may include one of the following steps: (a) contacting the peptide of the present invention with APC in vitro, in vitro or in vivo; and (b ) The polynucleotide encoding the peptide of the present invention is introduced into APC.

或者,本發明提供誘導具有Th1細胞誘導能力之APC之方法,其中此方法包括選自以下群組中之步驟:(a)使本發明之胜肽與一APC接觸,(b)將編碼為本發明胜肽之聚核苷酸導入一APC中。 Alternatively, the present invention provides a method for inducing APCs having the ability to induce Th1 cells, wherein the method comprises a step selected from the group consisting of (a) contacting a peptide of the present invention with an APC, and (b) encoding the The polynucleotide of the invention peptide is introduced into an APC.

本發明之方法可於體外(in vitro)、生物體外(ex vivo)或體內(in vivo)實施。較佳為,本發明之方法可於體外(in vitro)或生物體外(ex vivo)實施。在較佳具體例中,用於誘導具有Th1細胞誘導能力之APC的APC,較佳為表現擇自HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9中之至少1種作為MHC第II類分子之APC。此種APC可藉由該技術領域中周知的技術,從具有擇自HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9中之至少1種作為MHC第II類分子的對象所獲得之周邊血液單核細胞(PBMC)製備。本發明之方法所誘導之APC可為在其表面上呈現本發明之胜肽或其片段與HLA第II類抗原(例如HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9)之複合體的APC。當投予本發明之方法所誘導之APC到一對象以誘導於該對象中對抗癌症之免疫反應時,該對象較佳為與APC的來源為同一者。然而,該對象也可與APC捐贈者為不同者,只要該對象與APC捐贈者具有相同HLA類型即可。 The method of the present invention can be performed in vitro, ex vivo, or in vivo. Preferably, the method of the present invention can be performed in vitro or ex vivo. In a preferred embodiment, the APC for inducing APCs capable of inducing Th1 cells preferably exhibits at least one selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9 as MHC II APC-like molecules. This type of APC can be obtained from an object having at least one selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9 as an object of the MHC class II molecule by a technique known in the technical field. Preparation of blood mononuclear cells (PBMC). The APC induced by the method of the present invention may be a complex that presents a peptide of the present invention or a fragment thereof and an HLA class II antigen (such as HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9) on its surface. APC. When the APC induced by the method of the present invention is administered to a subject to induce an immune response against cancer in the subject, the subject is preferably the same source as the APC. However, the object may be different from the APC donor as long as the object and the APC donor have the same HLA type.

於另一具體例,本發明提供用於誘導具有Th1細胞誘導能力的 APC的試劑或組合物,且此種試劑或組合物包括本發明之胜肽或聚核苷酸中1或更多種。 In another specific example, the present invention provides a reagent or composition for inducing APC having Th1 cell inducing ability, and such reagent or composition includes one or more of the peptides or polynucleotides of the present invention.

於另一具體例,本發明提供本發明之胜肽或編碼為該胜肽的聚核苷酸之用途,其係用於製造試劑或組合物以配製供誘導APC。 In another specific example, the present invention provides the use of the peptide of the present invention or a polynucleotide encoding the peptide, which is used for manufacturing a reagent or a composition to be formulated for inducing APC.

或者,本發明更提供本發明之胜肽或編碼為該胜肽的聚核苷酸之用途,係用於誘導具有Th1細胞誘導能力之APC。 Alternatively, the present invention further provides the use of the peptide of the present invention or a polynucleotide encoding the peptide, which is used to induce APCs having the ability to induce Th1 cells.

於較佳具體例,本發明之胜肽不僅可誘導Th1反應,還可於APC中經處理後誘導CTL反應。因此於較佳具體例,本發明之方法製備的APC對於誘導對抗表現MPHOSPH1之細胞的CTL,包括誘導對抗癌細胞之CTL亦有用。例如當由含有序列辨識號3之胺基酸序列的胜肽誘導時,表現HLA-A2的APC適於誘導MPHOSPH1-專一性CTL。或者,當由含有序列辨識號:4之胺基酸序列的胜肽誘導時,表現HLA-A24之APC係適於誘導MPHOSPH1-專一性CTL。 In a preferred embodiment, the peptide of the present invention can not only induce a Th1 response, but can also induce a CTL response after being treated in APC. Therefore, in a preferred embodiment, the APC prepared by the method of the present invention is also useful for inducing CTLs against cells expressing MPHOSPH1, including inducing CTLs against cancer cells. For example, when induced by a peptide containing the amino acid sequence of sequence identification number 3, APC expressing HLA-A2 is suitable for inducing MPHOSPH1-specific CTL. Alternatively, when induced by a peptide containing an amino acid sequence having the sequence identification number: 4, an APC expressing HLA-A24 is suitable for inducing MPHOSPH1-specific CTL.

(2)誘導Th1細胞的方法: (2) Method for inducing Th1 cells:

此外,本發明也提供使用本發明之胜肽、編碼為此胜肽之聚核苷酸、或呈現本發明之胜肽或其片段之APC誘導Th1細胞的方法。本發明也提供使用編碼為多胜肽(即,TCR次單元)的一聚核苷酸誘導Th1細胞的方法,該多胜肽能形成辨識本發明之胜肽與HLA第II類抗原的複合體的TCR。較佳者,誘導Th1細胞的方法包括選自以下步驟至少其中之一:(a)使CD4+ T細胞與APC接觸,該抗原呈現細胞在其表面呈現HLA第II類抗原與本發明胜肽或其片段的複合體;(b)導入編碼TCR次單元兩者之聚核苷酸或編碼TCR次單元之各個的聚核苷酸到CD4+ T細胞內,其中TCR能夠辨識或結合本發明之胜肽或其片段與HLA第II類抗原的複合體。 In addition, the present invention also provides a method for inducing Th1 cells using the peptide of the present invention, a polynucleotide encoded as the peptide, or APC presenting the peptide of the present invention or a fragment thereof. The present invention also provides a method for inducing Th1 cells using a polynucleotide encoding a peptide (ie, a TCR subunit) that can form a complex that recognizes the peptide of the present invention and an HLA class II antigen TCR. Preferably, the method for inducing Th1 cells comprises at least one selected from the following steps: (a) contacting CD4 + T cells with APC, and the antigen-presenting cells present HLA class II antigens on the surface thereof with the peptide of the present invention or A complex of fragments thereof; (b) introducing a polynucleotide encoding both TCR subunits or a polynucleotide encoding each of the TCR subunits into a CD4 + T cell, wherein the TCR can recognize or combine the victory of the present invention Complex of peptide or fragment thereof with HLA class II antigen.

當投予本發明之胜肽到對象中時,會在該對象體內誘導Th1細 胞,且由MHC第II類分子媒介的(例如以該癌細胞為目標的之免疫反應)免疫反應強度增強。或者,該胜肽及編碼為該胜肽之聚核苷酸可用於一生物體外的治療法,其中,該對象來源的APC、CD4陽性細胞或周邊血液單核白血球和本發明胜肽在體外接觸(刺激),誘導出Th1細胞後,已活化的Th1細胞回到該對象。例如該方法可包括以下步驟:(a)從該對象收集APC;(b)使步驟(a)的APC接觸本發明之該胜肽;(c)將步驟(b)之APC與CD4+ T細胞混合並共同培養,以誘導Th1細胞,及(d)從步驟(c)之共同培養物收集CD4+ T細胞。 When the peptide of the present invention is administered to a subject, Th1 cells are induced in the subject, and the immune response intensity is enhanced by MHC class II molecular mediators (for example, the immune response targeting the cancer cell). Alternatively, the peptide and the polynucleotide encoding the peptide can be used in the treatment of an organism in vitro, wherein the subject's APC, CD4-positive cells or peripheral blood mononuclear white blood cells and the peptide of the present invention are contacted in vitro (Stimulation) After Th1 cells are induced, activated Th1 cells return to the subject. For example, the method may include the following steps: (a) collecting APC from the subject; (b) contacting the APC of step (a) with the peptide of the present invention; (c) contacting the APC of step (b) with CD4 + T cells Mix and co-culture to induce Th1 cells, and (d) collect CD4 + T cells from the co-culture of step (c).

再者,可藉由導入編碼為TCR次單元兩者之一聚核苷酸或編碼為各TCR次單元之多個聚核苷酸到CD4+ T細胞內來誘導Th1細胞,其中,該TCR能夠結合於本發明之胜肽或其片段與HLA第II類抗原的複合體。此種的轉導可如項目「VII.T細胞受體(TCR)」所述般實施。 Furthermore, Th1 cells can be induced by introducing into the CD4 + T cells one polynucleotide encoding one of the TCR subunits or a plurality of polynucleotides encoding each TCR subunit, wherein the TCR can Complex of the peptide or fragment thereof bound to the HLA class II antigen of the present invention. Such transduction can be performed as described in item "VII. T cell receptor (TCR)".

本發明之方法可於體外、生物體外或體內實施。較佳者,本發明之方法可於體外或生物體外實施。用於誘導Th1細胞的CD4+ T細胞可藉由該技術領域周知的方法從對象獲得之PBMC製備。於較佳具體例,CD4+ T細胞的捐贈者可為具有至少一選自HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9作為MHC第II類分子的對象。由本發明之方法誘導的Th1細胞,可為能辨識在其表面呈現本發明胜肽或其片段與HLA第II類抗原之複合體的APC者。當本發明方法所誘導之Th1細胞對於一對象投予以誘導該對象中對抗癌症之免疫反應(或由MHC第I類分子媒介之免疫反應)時,該對象較佳為與CD4+ T細胞之來源為同一對象。但,該對象也可與CD4+ T細胞之來源為不同對象,只要該對象與CD4+ T細胞之捐贈者有相同HLA類型即可。 The method of the invention can be performed in vitro, in vitro or in vivo. Preferably, the method of the present invention can be performed in vitro or in vitro. CD4 + T cells for inducing Th1 cells can be prepared from PBMC obtained from a subject by a method known in the art. In a preferred embodiment, the donor of the CD4 + T cells may be a subject having at least one member selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9 as a MHC class II molecule. The Th1 cell induced by the method of the present invention can be an APC capable of recognizing a complex of the peptide of the present invention or a fragment thereof and an HLA class II antigen on its surface. When Th1 cells induced by the method of the present invention are administered to a subject to induce an immune response against cancer in the subject (or an immune response by MHC class I molecular mediator), the subject is preferably derived from CD4 + T cells as The same object. However, the subject may be different from the source of the CD4 + T cells, as long as the subject has the same HLA type as the donor of the CD4 + T cells.

於較佳具體例,本發明之胜肽可誘導對抗表現MPHOSPH1之細 胞的CTL,及誘導Th1細胞。因此本發明更提供用於誘導CTL之方法,其包含選自以下構成之群組的至少一步驟:(a)將CD4+ T細胞與CD8+ T細胞兩者與已接觸本發明胜肽之APC共同培養;及(b)將CD8+ T細胞與與已接觸本發明胜肽之APC共同培養。 In a preferred embodiment, the peptide of the present invention can induce CTL against cells expressing MPHOSPH1, and induce Th1 cells. Therefore, the present invention further provides a method for inducing CTL, which comprises at least one step selected from the group consisting of: (a) co-culturing both CD4 + T cells and CD8 + T cells with APC that has been exposed to the peptide of the present invention ; And (b) co-culturing the CD8 + T cells with an APC that has been contacted with a peptide of the present invention.

於此種誘導CTL之方法,本發明之胜肽在APC中被處理以產生CTL抗原決定位胜肽,且產生之CTL抗原決定位胜肽被呈現在APC的表面。 In such a method for inducing CTL, the peptide of the present invention is processed in APC to generate a CTL epitope peptide, and the generated CTL epitope peptide is presented on the surface of APC.

或者依本發明,提供本發明之胜肽之用途,係供製造誘導Th1細胞之醫藥試劑或組合物。此外本發明提供一種用於製造誘導Th1細胞之醫藥試劑或組合物之方法或處理,其中此方法包含將本發明之胜肽與醫藥上可接受之擔體混合或配製之步驟。又,本發明也提供用於誘導Th1細胞之本發明之胜肽。 Or according to the present invention, the use of the peptide of the present invention is provided for the manufacture of a pharmaceutical agent or composition that induces Th1 cells. In addition, the present invention provides a method or treatment for manufacturing a pharmaceutical agent or composition that induces Th1 cells, wherein the method comprises the step of mixing or formulating the peptide of the present invention with a pharmaceutically acceptable carrier. The present invention also provides a peptide of the present invention for inducing Th1 cells.

由本發明方法誘導之CD4+ T細胞,可對於一對象投予以作為疫苗。 The CD4 + T cells induced by the method of the present invention can be administered to a subject as a vaccine.

本發明上下文中,過度表現MPHOSPH1之癌症可以此等有效成分治療。此種癌的例子,包括但不限於膀胱癌及乳癌。因此在投予包含此有效成分之疫苗或醫藥組合物前,宜先確認是否在欲治療之癌細胞或組織中,比起相同器官的正常細胞,MPHOSPH1的表現水平有所增加。因此於一具體例,本發明提供一種用於治療(過度)表現MPHOSPH1之癌症之方法,此方法可包括以下步驟:(i)測定在欲治療癌症的對象獲得的癌細胞或組織當中的MPHOSPH1表現水平;(ii)將此MPHOSPH1表現水平與正常的對照組比較;及(iii)投予由上述(a)至(d)構成之群組中至少一成分至患有比起正常對照組而言有過度表現MPHOSPH1之癌症的對象。 In the context of the present invention, cancers that overexpress MPHOSPH1 can be treated with these active ingredients. Examples of such cancers include, but are not limited to, bladder cancer and breast cancer. Therefore, before administering a vaccine or pharmaceutical composition containing this active ingredient, it is advisable to confirm whether the expression level of MPHOSPH1 has increased in cancer cells or tissues to be treated compared to normal cells of the same organ. Therefore, in a specific example, the present invention provides a method for treating (excessive) cancer expressing MPHOSPH1. The method may include the following steps: (i) measuring MPHOSPH1 expression in cancer cells or tissues obtained from a subject to be treated with cancer. Level; (ii) compare the performance level of this MPHOSPH1 with a normal control group; and (iii) administer at least one component of the group consisting of (a) to (d) above to those suffering from disease compared with the normal control group Subjects with cancer that overexpresses MPHOSPH1.

或者本發明可提供疫苗或醫藥組合物以供對罹患過度表現MPHOSPH1之癌症的對象投予,其包括選自由上述(a)至(d)構成之群組中至少一種成分。換言之本發明更提供鑑別欲以本發明MPHOSPH1多胜肽治療之對象的方法,此方法包括決定衍生自對象之癌細胞或組織中的MPHOSPH1表現水平的步驟,其中,相較於該基因之正常對照為增加的水平代表此對象具有可用本發明之MPHOSPH1多胜肽治療的癌症。本發明之癌症治療方法將於以下更詳細敘述。 Alternatively, the present invention can provide a vaccine or a pharmaceutical composition for administration to a subject suffering from a cancer that overexpresses MPHOSPH1, which comprises at least one component selected from the group consisting of (a) to (d) above. In other words, the present invention further provides a method for identifying a subject to be treated with the MPHOSPH1 polypeptide of the present invention. The method includes a step of determining the expression level of MPHOSPH1 in cancer cells or tissues derived from the subject, wherein the gene is compared to a normal control of the gene The increased levels represent that this subject has a cancer that can be treated with the MPHOSPH1 polypeptide of the invention. The cancer treatment method of the present invention will be described in more detail below.

再者,於較佳具體例,可於投予本發明胜肽前先鑑別一對象之HLA型。例如宜對於鑑別為具有HLA-DR9、HLA-DP5或HLA-DR4之對象投予具有序列識別號:1之胺基酸序列的胜肽。或者,宜對於鑑別為具有HLA-DR4或HLA-DP2之對象投予具有序列識別號:2之胺基酸序列的胜肽。 Furthermore, in a preferred embodiment, the HLA type of a subject can be identified before administration of the peptide of the present invention. For example, a subject identified as having HLA-DR9, HLA-DP5 or HLA-DR4 is preferably administered with a peptide having an amino acid sequence having a sequence identification number: 1. Alternatively, it is preferable to administer a peptide having an amino acid sequence having a sequence identification number: 2 to a subject identified as having HLA-DR4 or HLA-DP2.

可使用任何由對象而來的細胞或組織決定MPHOSPH1-表現,只要其包括MPHOSPH1的目標轉錄或轉譯產物即可。適合的樣本的例子包括但不限於體組織及體液,例如血、唾液及尿。較佳者,由對象而來的細胞或組織樣本含有包括上皮細胞的細胞群體,更佳為癌上皮細胞或由懷疑為癌的組織所衍生的上皮細胞。又,視需要可從獲得的體組織及體液純化該細胞然後使用當做對象衍生的樣本。 Any cell or tissue derived from the subject can be used to determine MPHOSPH1-expression as long as it includes the target transcription or translation product of MPHOSPH1. Examples of suitable samples include, but are not limited to, body tissues and fluids, such as blood, saliva, and urine. Preferably, the cell or tissue sample from the subject contains a cell population including epithelial cells, more preferably cancerous epithelial cells or epithelial cells derived from tissue suspected of being cancerous. If necessary, the cells can be purified from the obtained body tissues and fluids and then used as a subject-derived sample.

以本發明方法治療的對象較佳為哺乳動物。哺乳動物例如包括但不限於例如人、非人類靈長類、小鼠、大鼠、犬、貓、馬及牛。 The subject to be treated by the method of the present invention is preferably a mammal. Mammals include, for example, but are not limited to, for example, humans, non-human primates, mice, rats, dogs, cats, horses, and cattle.

依照本發明,可決定由一對象獲得的癌細胞或組織中的MPHOSPH1表現水平。該表現水平可於轉錄(核酸)產物層級,使用該技術領域已知的方法決定。例如MPHOSPH1的mRNA可以藉由雜交法使用探針定量(例如北方雜交法)。該檢測可於晶片上、陣列上等實施。使用陣列對於偵測MPHOSPH1的表現水平為較佳。該技術領域中具有通常知識者可利用MPHOSPH1的序列資 訊製備此種探針。例如可使用MPHOSPH1的cDNA當做探針。視需要,可將該探針以適合的標記例如染料、螢光物質及同位素標記,且該基因的表現水平可以該雜交的標記的強度檢測。 According to the present invention, the expression level of MPHOSPH1 in cancer cells or tissues obtained from a subject can be determined. This level of performance can be determined at the transcription (nucleic acid) product level, using methods known in the art. For example, the mRNA of MPHOSPH1 can be quantified by hybridization using a probe (eg, northern hybridization). This inspection can be performed on a wafer, on an array, or the like. Using an array is better for detecting the performance level of MPHOSPH1. Those of ordinary skill in the art can use the sequence information of MPHOSPH1 to prepare such probes. For example, cDNA of MPHOSPH1 can be used as a probe. If necessary, the probe can be labeled with a suitable label such as a dye, a fluorescent substance, and an isotope, and the expression level of the gene can be detected by the intensity of the hybridized label.

再者,MPHOSPH1的轉錄產物(例如序列識別號:5或7),可藉由擴增為主的檢測方法(例如RT-PCR)使用引子定量。此種引子可依照該基因可得的序列資訊製備。 Furthermore, the transcription product of MPHOSPH1 (for example, sequence identification number: 5 or 7) can be quantified using primers by amplification-based detection methods (for example, RT-PCR). Such primers can be prepared based on the sequence information available for the gene.

具體而言,將供本發明使用的探針或引子於嚴苛、中度嚴苛或低嚴苛條件下,雜交於MPHOSPH1之mRNA。此處使用的用詞「嚴苛(雜交)條件」係指在此條件下,探針或引子會雜交於其目標序列但不會與其他序列雜交。嚴苛條件為序列依存性,且在不同狀況下會不同。較長序列的特定雜交比起較短的序列會在較高溫觀察到。一般而言,嚴苛條件的溫度係選自比起特定序列在一定義的離子強度及pH時的熱熔點(Tm)低約攝氏5度的溫度。該Tm係指50%互補於其目標序列的探針與該目標序列之雜交達到平衡的溫度(於一定義的離子強度、pH及核酸濃度)。由於該目標序列一般係過量呈現,於Tm,50%的探針會以平衡佔據。通常嚴苛條件為鹽濃度少於約1.0M鈉離子,通常約0.01至1.0M鈉離子(或其他鹽)、pH 7.0至8.3,且對於短的探針或引子(例如10至50個核苷酸),溫度至少約攝氏30度,對於較長的探針或引子,至少約攝氏60度。嚴苛條件也可藉由添加去安定物質例如甲醯胺而達到。 Specifically, the probe or primer for use in the present invention is hybridized to MPHOSPH1 mRNA under severe, moderately severe, or lowly severe conditions. As used herein, the term "stringent (hybrid) conditions" means that under these conditions, a probe or primer will hybridize to its target sequence but will not hybridize to other sequences. Stringent conditions are sequence dependencies and will be different under different conditions. Specific hybrids of longer sequences are observed at higher temperatures than shorter sequences. Generally speaking, the temperature of a severe condition is selected from a temperature about 5 degrees Celsius lower than the thermal melting point (Tm) at a defined ionic strength and pH of a specific sequence. The Tm refers to the temperature (at a defined ionic strength, pH, and nucleic acid concentration) at which hybridization between a probe that is 50% complementary to its target sequence and the target sequence reaches equilibrium. Since the target sequence is generally overexpressed, at Tm, 50% of the probes will be occupied by equilibrium. Usually harsh conditions are less than about 1.0M sodium ions, usually about 0.01 to 1.0M sodium ions (or other salts), pH 7.0 to 8.3, and for short probes or primers (e.g. 10 to 50 nucleosides) Acid), at least about 30 degrees Celsius, and at least about 60 degrees Celsius for longer probes or primers. Harsh conditions can also be achieved by adding destabilizing substances such as formamidine.

或者可偵測轉譯產物以診斷本發明。例如可決定MPHOSPH1蛋白質(序列識別號:6或8)的量。確認轉譯產物的蛋白質量的方法,包括使用專一性辨識該蛋白質的抗體的免疫分析方法。該抗體可為單株抗體或多株抗體。再者可使用抗體的任何片段或修飾(例如嵌合抗體、scFv、Fab、F(ab')2、Fv等)以供偵測,只要該片段或修飾抗體保留對於該MPHOSPH1蛋白質的結合能力即可。製備此種用於偵測蛋白質的抗體的方法在該技術領域中為周知,且可採用任意 方法於本發明中以製備此種抗體及其均等物。 Alternatively, translation products can be detected to diagnose the invention. For example, the amount of MPHOSPH1 protein (sequence identification number: 6 or 8) can be determined. A method for confirming the protein quality of a translation product includes an immunoassay method using an antibody that specifically recognizes the protein. The antibody may be a single antibody or multiple antibodies. Furthermore, any fragment or modification of the antibody (such as a chimeric antibody, scFv, Fab, F (ab ') 2 , Fv, etc.) can be used for detection, as long as the fragment or modified antibody retains the ability to bind to the MPHOSPH1 protein. can. Methods for preparing such antibodies for detecting proteins are well known in the art, and any method can be used in the present invention to prepare such antibodies and their equivalents.

就基於轉譯產物偵測MPHOSPH1基因的表現水平的另一方法而言,染色強度可使用對抗該MPHOSPH1蛋白質的抗體,利用免疫組織化學分析測定。亦即,於該測量中,強染色代表該蛋白質的存在/水平增加,且同時,MPHOSPH1基因表現水平高。 In another method for detecting the expression level of the MPHOSPH1 gene based on the translation product, the intensity of staining can be determined using an antibody against the MPHOSPH1 protein using immunohistochemical analysis. That is, in this measurement, strong staining represents an increase in the presence / level of the protein, and at the same time, the MPHOSPH1 gene expression level is high.

目標基因例如MPHOSPH1基因於癌細胞中的表現水平,若水平比起該目標基因的對照組水平(例如於正常細胞中的水平細胞)增加例如10%、25%或50%;或增加超過1.1倍、高於1.5倍、高於2.0倍、高於5.0倍、高於10.0倍或更多,則決定為增加。 The expression level of a target gene such as MPHOSPH1 gene in cancer cells, if the level is increased by 10%, 25%, or 50% compared to the control level of the target gene (such as horizontal cells in normal cells); or increased by more than 1.1 times , Higher than 1.5 times, higher than 2.0 times, higher than 5.0 times, higher than 10.0 times or more, it is decided to increase.

該對照水平可與癌細胞同時決定,係藉由使用預先從對象收集並保存的樣本實施,該對象的疾病狀態(有罹癌或未罹癌)為已知。此外,從具有欲治療的癌的一器官的非癌化區獲得的細胞可當做正常對照。或者該對照水平可依據先前對於從疾病狀態已知的對象得到的樣本中MPHOSPH1基因的表現水平決定的結果分析的統計方法決定。再者,該對照水平可從衍生自先前測試的細胞的表現樣式的資料庫衍生。又,依照本發明一態樣,於一生物學樣本中的MPHOSPH1基因表現水平可以與從多個參考樣本決定的多個對照水平比較。較佳為使用從衍生自與該對象得到的生物學樣本類似的組織類型的參考樣本所決定的對照水平。再者,較佳為使用疾病狀態已知的群體當中的MPHOSPH1基因的表現水平的標準值。該標準值可由該技術領域中已知的任意方法獲得。例如,平均值+/- 2 S.D.或平均值+/- 3 S.D.的範圍可當作該標準值。 This control level can be determined at the same time as the cancer cells, and is performed by using a sample collected and stored from a subject in advance, and the subject's disease state (with or without cancer) is known. In addition, cells obtained from a non-cancerous region of an organ with cancer to be treated can be used as normal controls. Alternatively, the control level may be determined according to a statistical method of result analysis previously determined for the expression level of the MPHOSPH1 gene in a sample obtained from a subject with a known disease state. Furthermore, the control level can be derived from a database derived from the performance patterns of previously tested cells. In addition, according to one aspect of the present invention, the expression level of MPHOSPH1 gene in a biological sample can be compared with multiple control levels determined from multiple reference samples. It is preferred to use a control level determined from a reference sample derived from a tissue type similar to the biological sample obtained from the subject. In addition, it is preferable to use a standard value of the expression level of the MPHOSPH1 gene in a population whose disease state is known. The standard value can be obtained by any method known in the art. For example, a range of average +/- 2 S.D. or average +/- 3 S.D. can be used as the standard value.

本發明文中,由已知非癌化的生物學樣本決定的對照水平,稱為「正常對照水平」。另一方面,若該對照水平係從癌化的生物學樣本決定,其稱為「癌化的對照水平」。樣本表現水平與對照水平之間的差異可常態化為對照核酸例如管家基因的表現水平,其表現水平已知不會取決於細胞的癌化或非 癌化而不同。示例之對照基因包括但不限於β-肌動蛋白、甘油醛3磷酸去氫酶及核糖體蛋白質P1。 In the context of the present invention, a control level determined from a known non-cancerous biological sample is referred to as a "normal control level". On the other hand, if the control level is determined from a cancerous biological sample, it is called a "control level for canceration". The difference between the performance level of a sample and the control level can be normalized to the performance level of a control nucleic acid, such as a housekeeping gene, whose performance level is known not to vary depending on whether the cell is cancerous or non-cancerous. Exemplary control genes include, but are not limited to, β-actin, glyceraldehyde 3 phosphate dehydrogenase, and ribosomal protein P1.

當MPHOSPH1基因的表現水平比起正常對照水平為增加時,或者相近/均等於癌化對照水平時,該對象可診斷為患有欲治療的癌症。 When the expression level of the MPHOSPH1 gene is increased compared to the normal control level, or when the expression level of the MPHOSPH1 gene is close to or equal to the level of the cancerous control, the subject can be diagnosed as having cancer to be treated.

更具體而言,本發明提供一種方法,係(i)診斷是否一對象患有欲治療的癌症及/或(ii)選擇供癌症治療的對象,該方法包括以下步驟:(a)測定由懷疑患有欲治療的癌症的對象獲得的癌細胞或組織中的MPHOSPH1表現水平;(b)比較其MPHOSPH1表現水平與正常對照水平;(c)若MPHOSPH1的表現水平比起正常對照水平為增加,則診斷該對象是患有欲治療的癌症;(d)若步驟(c)中診斷該對象患有欲治療的癌症時,則選擇供癌症治療的對象。 More specifically, the present invention provides a method for (i) diagnosing whether a subject has a cancer to be treated and / or (ii) selecting a subject for cancer treatment, the method comprising the following steps: The expression level of MPHOSPH1 in cancer cells or tissues obtained by the subject with the cancer to be treated; (b) comparing its expression level of MPHOSPH1 with the normal control level; (c) if the expression level of MPHOSPH1 is increased compared to the normal control level, then The subject is diagnosed as having a cancer to be treated; (d) if the subject is diagnosed as having a cancer to be treated in step (c), a subject for cancer treatment is selected.

或者該方法可包括以下步驟:(a)測定由懷疑患有欲治療的癌症的對象獲得的癌細胞或組織樣本中的MPHOSPH1表現水平;(b)比較其MPHOSPH1表現水平與癌化對照水平;(c)若MPHOSPH1的表現水平相似於或等同於癌化對照水平,則診斷該對象是患有欲治療的癌症;及(d)若步驟(c)中診斷該對象患有欲治療的癌症時,則選擇供癌症治療的對象。 Alternatively, the method may include the steps of: (a) determining the MPHOSPH1 expression level in a cancer cell or tissue sample obtained from a subject suspected of having a cancer to be treated; (b) comparing its MPHOSPH1 expression level with a cancerous control level; ( c) if the expression level of MPHOSPH1 is similar to or equivalent to a cancerous control level, the subject is diagnosed as having the cancer to be treated; and (d) if the subject is diagnosed as having the cancer to be treated in step (c) Then choose a subject for cancer treatment.

於一些具體例,此方法在上述定義的(a)-(d)步驟後,可更包含鑑別具有選自於由HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9構成之群組之HLA的對象的步驟。依本發明之癌症療法較佳係針對罹患過度表現MPHOSPH1之癌且具有HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9中之任一者的對象。HLA分型的方法係該技術領域中為人熟知者。例如針對將HLA對偶基因分型的以 PCR為主的方法係為人熟知。專一於各HLA分子的抗體,在鑑別一對象之HLA型時亦為適當的工具。 In some specific examples, after the steps (a)-(d) defined above, the method may further include identifying a group selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9. HLA object steps. The cancer therapy according to the present invention is preferably directed to a subject suffering from a cancer overexpressing MPHOSPH1 and having any one of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9. Methods of HLA typing are well known in the art. For example, PCR-based methods for genotyping HLA dual genotypes are well known. Antibodies specific to each HLA molecule are also appropriate tools in identifying the HLA type of a subject.

本發明也提供一種套組,係用於確認患有可利用本發明之MPHOSPH1多胜肽治療的癌症的對象,其也對於評估及/或監控特定癌症療法,更特別是癌症免疫療法的效力是有用的。適合之癌症的例子包括但不限於膀胱癌及乳癌。尤其,該套組較佳為包括偵測對象衍生的癌細胞中的該MPHOSPH1基因的表現的至少一種試劑,該試劑可選自以下群組:(a)偵測該MPHOSPH1基因之mRNA的試劑;(b)偵測該MPHOSPH1蛋白質的試劑;及(c)偵測該MPHOSPH1蛋白質的生物學活性的試劑。 The present invention also provides a kit for identifying a subject with a cancer that can be treated with the MPHOSPH1 polypeptide of the present invention, which is also useful for assessing and / or monitoring the efficacy of specific cancer therapies, and more particularly cancer immunotherapy. useful. Examples of suitable cancers include, but are not limited to, bladder cancer and breast cancer. In particular, the set preferably includes at least one agent that detects the expression of the MPHOSPH1 gene in cancer cells derived from the subject, and the agent may be selected from the following group: (a) a reagent that detects mRNA of the MPHOSPH1 gene; (b) an agent for detecting the MPHOSPH1 protein; and (c) an agent for detecting the biological activity of the MPHOSPH1 protein.

適合偵測該MPHOSPH1基因之mRNA的試劑的例子,可包括專一性結合於該MPHOSPH1 mRNA或鑑別該MPHOSPH1 mRNA的核酸,例如具有互補於該MPHOSPH1 mRNA的序列的寡核苷酸。此等種類的寡核苷酸例如專一於該MPHOSPH1 mRNA的引子及探針。此等種類的寡核苷酸可依照該技術領域周知的方法製備。若需要,可將偵測該MPHOSPH1 mRNA的試劑固定化在固體基質上。又,該套組中可包括多於一種偵測該MPHOSPH1 mRNA的試劑。 Examples of reagents suitable for detecting the mRNA of the MPHOSPH1 gene may include a nucleic acid that specifically binds to or identifies the MPHOSPH1 mRNA, such as an oligonucleotide having a sequence complementary to the MPHOSPH1 mRNA. These kinds of oligonucleotides are, for example, primers and probes specific to the MPHOSPH1 mRNA. These kinds of oligonucleotides can be prepared according to methods well known in the art. If necessary, a reagent for detecting the MPHOSPH1 mRNA can be immobilized on a solid substrate. In addition, the kit may include more than one reagent for detecting the MPHOSPH1 mRNA.

另一方面,適合偵測該MPHOSPH1蛋白質的試劑的例子,包括對於該MPHOSPH1蛋白質的抗體。該抗體可為單株抗體或多株抗體。再者,可使用抗體的任何片段或修飾(例如嵌合抗體、scFv、Fab、F(ab')2、Fv等)當做該試劑,只要該片段或修飾抗體保留對於該MPHOSPH1蛋白質的結合能力即可。製備此等種類的偵測蛋白質的抗體的方法,在該技術領域為人周知,且可在本發明中採用任意方法以製備此種抗體及其均等物。再者,該抗體可經由直接連結或間接標定技術而以訊號產生分子標記。標記抗體及偵測該抗體結合於其目標的標記及方法,在該技術領域係為人周知,且在本發明可使用任意標記及方法。 又,該套組中可包括多於一種偵測該MPHOSPH1蛋白質的試劑。 On the other hand, examples of reagents suitable for detecting the MPHOSPH1 protein include antibodies to the MPHOSPH1 protein. The antibody may be a single antibody or multiple antibodies. Furthermore, any fragment or modification of the antibody (such as a chimeric antibody, scFv, Fab, F (ab ') 2 , Fv, etc.) can be used as the reagent, as long as the fragment or modified antibody retains the ability to bind to the MPHOSPH1 protein. can. Methods for preparing these kinds of antibodies that detect proteins are well known in the art, and any method can be used in the present invention to prepare such antibodies and their equivalents. Furthermore, the antibody can generate molecular markers with signals via direct link or indirect calibration techniques. Labeling antibodies and labels and methods for detecting the binding of the antibodies to their targets are well known in the art, and arbitrary labels and methods can be used in the present invention. In addition, the kit may include more than one reagent for detecting the MPHOSPH1 protein.

該套組可含有多於一種的上述試劑。例如由沒有癌症或患有癌症的對象獲得的組織樣本,可當做有用的對照試劑。本發明的套組從商業及使用者角度所需,可更包括其他材料,包括其他緩衝液、稀釋劑、濾器、針、針筒及有使用指示的包裝插入物(例如紙、錄音帶、CD-ROM等)。此等試劑保留在有標籤的容器中。適合的容器包括瓶、小玻璃瓶及試管。此等容器可由各種材料形成,例如玻璃或塑膠。 The kit may contain more than one of the aforementioned agents. For example, a tissue sample obtained from a subject without or with cancer can be used as a useful control reagent. The kit of the present invention is required from a commercial and user perspective, and may further include other materials, including other buffers, thinners, filters, needles, syringes, and packaging inserts with instructions for use (such as paper, audio tapes, CD- ROM, etc.). These reagents are kept in labeled containers. Suitable containers include bottles, vials and test tubes. These containers can be formed from a variety of materials, such as glass or plastic.

本發明之一具體例中,當該試劑為對抗該MPHOSPH1 mRNA的探針時,該試劑可固定化在固體基質上,例如多孔條,以形成至少一個偵測部位。該多孔條的測量或偵測區可包括多個部位,各含有核酸(探針)。試條也可含有供陰性及/或陽性對照的部位。或者對照部位可位在與試條分開的條片上。視情形,該不同的偵測部位可含有不同量的固定化核酸,亦即在第一偵測部位為較高量,而在接續的部位為較低量。藉由添加測試樣本,顯示可偵測訊號的部位的數目提供存在於該樣本中的MPHOSPH1 mRNA量的定量指示。該偵測部位可為任何適於偵測的形狀,通常為或跨越試條寬度方向的桿狀或點狀。 In a specific example of the present invention, when the reagent is a probe against the MPHOSPH1 mRNA, the reagent may be immobilized on a solid substrate, such as a porous strip, to form at least one detection site. The measurement or detection area of the porous strip may include multiple sites, each containing a nucleic acid (probe). Test strips can also contain sites for negative and / or positive controls. Alternatively, the control site may be located on a strip separate from the test strip. Depending on the situation, the different detection sites may contain different amounts of immobilized nucleic acid, that is, a higher amount at the first detection site and a lower amount at the succeeding site. By adding a test sample, the number of sites showing a detectable signal provides a quantitative indication of the amount of MPHOSPH1 mRNA present in the sample. The detection position may be any shape suitable for detection, and is usually a rod or dot shape that spans the width of the test strip.

本發明的套組可更包含陽性對照樣本或MPHOSPH1標準樣本。本發明的陽性對照樣本可藉由收集MPHOSPH1陽性樣本,然後分析其MPHOSPH1水平而製備。或者可對不表現MPHOSPH1的細胞添加純化的MPHOSPH1蛋白質或聚核苷酸,以形成該陽性樣本或該MPHOSPH1標準樣本。本發明中,純化的MPHOSPH1可為重組蛋白質。該陽性對照樣本的MPHOSPH1水平例如高於截斷值。 The kit of the present invention may further include a positive control sample or a MPHOSPH1 standard sample. The positive control sample of the present invention can be prepared by collecting a MPHOSPH1 positive sample and then analyzing its MPHOSPH1 level. Alternatively, purified MPHOSPH1 protein or polynucleotide may be added to cells that do not express MPHOSPH1 to form the positive sample or the MPHOSPH1 standard sample. In the present invention, the purified MPHOSPH1 may be a recombinant protein. The MPHOSPH1 level of the positive control sample is, for example, higher than the cutoff value.

X.抗體 X. Antibodies

本發明更提供結合於本發明之胜肽的抗體。較佳的抗體係專一性結合於本發明之胜肽的抗體且不會(或微弱結合於)非本發明之胜肽。或者結合於本發明的 胜肽的抗體,以及其同系物。對抗本發明胜肽的抗體於癌症診斷及預後分析法、及造影方法中有用。同樣地,此種抗體在其他癌症治療、診斷及/或預後方面有用,只要MPHOSPH1在癌症病患中也有表現或過度表現。又,細胞內表現的抗體(例如單鏈抗體)在治療上用於治療涉及MPHOSPH1表現的癌症為有用,癌症的例子包括但不限於膀胱癌及乳癌。 The invention further provides antibodies that bind to the peptides of the invention. Preferred antibodies have antibodies that specifically bind to the peptides of the invention and do not (or weakly bind) to non-peptides of the invention. Alternatively, antibodies that bind to the peptides of the present invention, and homologues thereof. Antibodies against the peptides of the present invention are useful in cancer diagnostic and prognostic analysis methods and angiographic methods. Similarly, such antibodies are useful in the treatment, diagnosis, and / or prognosis of other cancers, as long as MPHOSPH1 is also expressed or overexpressed in cancer patients. In addition, antibodies (for example, single-chain antibodies) expressed intracellularly are useful for the treatment of cancers involving the expression of MPHOSPH1. Examples of cancers include, but are not limited to, bladder cancer and breast cancer.

本發明也提供偵測及/或定量包括由選自序列識別號:1至2之胺基酸序列構成之多胜肽之MPHOSPH1蛋白質(序列識別號:6或8)或其片段的各種免疫分析法。此種分析法可包括一種或更多抗MPHOSPH1抗體,其能適當辨識及結合於MPHOSPH1蛋白質或片段。本發明中,結合於MPHOSPH1多胜肽的抗MPHOSPH1抗體較佳為辨識由選自序列識別號:1至2之胺基酸序列構成之多胜肽者,更佳為排除其他的胜肽。抗體的結合專一性,可利用抑制試驗確認。即,當欲分析的抗體與全長之MPHOSPH1多胜肽間的結合在存在具有選自序列識別號:1至2中之胺基酸序列之多胜肽時受抑制,則視為該抗體「專一性地結合」於該片段。本發明中,此種免疫分析法係以該技術領域中周知的各種免疫分析法格式實施,包括但不限於各種放射免疫分析法、免疫層析技術、酵素連結免疫吸附分析法(ELISA)、酵素連結免疫螢光分析法(ELIFA)等。 The present invention also provides various immunoassays that detect and / or quantify the MPHOSPH1 protein (sequence identification number: 6 or 8) or a fragment thereof comprising a polypeptide consisting of amino acid sequences selected from the sequence identification numbers: 1 to 2 law. Such assays may include one or more anti-MPHOSPH1 antibodies that are capable of properly identifying and binding to MPHOSPH1 proteins or fragments. In the present invention, the anti-MPHOSPH1 antibody bound to the MPHOSPH1 polypeptide is preferably one that recognizes a polypeptide composed of an amino acid sequence selected from sequence identification numbers: 1 to 2, and more preferably excludes other peptides. The binding specificity of an antibody can be confirmed by an inhibition test. That is, when the binding between the antibody to be analyzed and the full-length MPHOSPH1 polypeptide is inhibited in the presence of a polypeptide having an amino acid sequence selected from the sequence identification numbers: 1 to 2, the antibody is considered "specific "Sexually bind" to the fragment. In the present invention, such an immunoassay is implemented in various immunoassay formats known in the technical field, including but not limited to various radioimmunoassays, immunochromatographic techniques, enzyme-linked immunosorbent assay (ELISA), enzyme Linked immunofluorescence analysis (ELIFA), etc.

相關的本發明的免疫學但非抗體分析法可包括T細胞免疫產生性分析法(抑制性或刺激性),及MHC結合分析法。此外,本發明也提供能偵測表現MPHOSPH1的癌症的免疫造影法,包括但不限於使用本發明經標記抗體的放射閃爍攝影造影法。此種分析法可在臨床上於偵測、監控及預測MPHOSPH1表現的癌症為提供效用,癌症包括但不限於膀胱癌及乳癌。 Related immunological but non-antibody assays of the invention may include T cell immunogenicity assays (inhibitory or irritant), and MHC binding assays. In addition, the present invention also provides an immunocontrast method capable of detecting a cancer expressing MPHOSPH1, including but not limited to a radioscintigraphy method using a labeled antibody of the present invention. This analysis method can be used clinically to detect, monitor and predict the performance of MPHOSPH1 cancer, including but not limited to bladder cancer and breast cancer.

本發明也提供結合於本發明胜肽的抗體。本發明的抗體可以任意形式使用,例如單株抗體或多株抗體,且包括藉由以本發明胜肽將動物例如兔子免疫所得的抗血清、所有類型的多株及及單株抗體、人類抗體與由基因重組 產生的人類化抗體。 The invention also provides antibodies that bind to the peptides of the invention. The antibodies of the present invention can be used in any form, such as monoclonal antibodies or polyclonal antibodies, and include antisera obtained by immunizing animals such as rabbits with peptides of the invention, all types of polyclonal and monoclonal antibodies, and human antibodies. With humanized antibodies produced by genetic recombination.

本發明的胜肽當做抗原以獲得的抗體,可由任意動物種衍生,但較佳為衍生自哺乳動物例如人、小鼠、大鼠,更佳為人。人類來源的胜肽可由此處所揭露的核苷酸或胺基酸序列獲得。 The peptides of the present invention are used as antigens to obtain antibodies, which can be derived from any animal species, but preferably derived from mammals such as humans, mice, rats, and more preferably humans. Human-derived peptides can be obtained from the nucleotide or amino acid sequences disclosed herein.

依照本發明,作為免疫抗原的該胜肽,可為本發明多胜肽之完整胜肽或部分胜肽。適合之部分胜肽的例子可包括例如本發明胜肽的胺基(N)末端或羧基(C)末端片段。 According to the present invention, the peptide as an immune antigen may be a complete peptide or a partial peptide of the polypeptide of the present invention. Examples of suitable partial peptides may include, for example, the amine (N) terminal or carboxy (C) terminal fragment of a peptide of the present invention.

在此,抗體定義為與MPHOSPH1胜肽的全長或片段反應的蛋白質。於一較佳具體例,本發明抗體可辨識具有選自序列識別號:1至2中之胺基酸序列的MPHOSPH1片段胜肽。用於合成寡胜肽的方法在該技術領域為周知。合成後,在使用為免疫原之前可視情形將胜肽純化。本發明中,該寡胜肽(例如24員或26員)可以與擔體接合或連結以增強免疫產生性。鑰孔血藍蛋白(Keyhole-limpet hemocyanin,KLH)為周知的擔體。合KLH與胜肽的方法,也是該技術領域中周知的。 Here, an antibody is defined as a protein that reacts with the full length or a fragment of the MPHOSPH1 peptide. In a preferred embodiment, the antibody of the present invention can recognize an MPHOSPH1 fragment peptide having an amino acid sequence selected from sequence identification numbers: 1 to 2. Methods for synthesizing oligopeptides are well known in the art. After synthesis, the peptide may be purified optionally before use as an immunogen. In the present invention, the oligopeptide (for example, 24 members or 26 members) may be conjugated or linked to a support to enhance immunogenicity. Keyhole-limpet hemocyanin (KLH) is a well-known carrier. The method of binding the peptides to KLH, is well known in the art.

或者,可將編碼為本發明胜肽或其片段的基因插入已知的表現載體,然後用於轉形在此敘述的宿主細胞。可從該宿主細胞的外面或裡面以標準方法回收所望的胜肽或其片段,且接著可當做抗原。或者可將表現該胜肽的整個細胞或其溶解物或化學合成的胜肽當做抗原。 Alternatively, a gene encoding a peptide or fragment thereof of the present invention can be inserted into a known expression vector and then used to transform a host cell described herein. The desired peptide or fragment thereof can be recovered from the outside or inside of the host cell by standard methods, and can then be used as an antigen. Alternatively, the whole cell expressing the peptide or its lysate or chemically synthesized peptide can be used as an antigen.

可將任何哺乳動物以該抗原免疫,但較佳為考量與用在細胞融合的母細胞的相容性。一般而言,可使用囓齒科動物、兔或靈長科動物。囓齒科的動物包括例如小鼠、大鼠、倉鼠。兔科動物包括例如兔子。靈長科動物例如狹鼻小目(Catarrhini)猴(舊世界猴),例如食蟹猴(Macaca fascicularis)、獼猴,狒狒、黑猩猩。 Any mammal can be immunized with the antigen, but it is preferred to consider compatibility with the mother cell used for cell fusion. In general, rodents, rabbits or primates can be used. Animals of the rodent family include, for example, mice, rats, and hamsters. Rabbits include, for example, rabbits. Primates such as Catarrhini monkeys (Old World monkeys) such as Macaca fascicularis, macaques, baboons, chimpanzees.

以抗原免疫動物的方法為該技術領域中已知。腹膜內注射或皮下 注射抗原為免疫動物的標準方法。更具體而言,可將抗原稀釋及懸浮於適當量的磷酸鹽緩衝鹽液(PBS)、生理鹽液等。若需要,可將抗原懸浮液與適量的標準佐劑混合,標準佐劑例如佛洛依德(Freund)完全佐劑,而形成乳劑後對於哺乳動物投予。較佳者,每4至21天數次投予與適量佛洛依德(Freund)不完全佐劑混合的抗原。適當的擔體也可用於進行免疫。如上免疫進行後,可藉由標準方法檢驗血清中所望抗體量的增加。 Methods of immunizing animals with antigens are known in the art. Intraperitoneal or subcutaneous injection of antigen is the standard method for immunizing animals. More specifically, the antigen can be diluted and suspended in an appropriate amount of phosphate buffered saline (PBS), physiological saline, or the like. If desired, the antigen suspension can be mixed with an appropriate amount of a standard adjuvant, such as Freund's complete adjuvant, and the emulsion can be administered to a mammal. Preferably, an antigen mixed with an appropriate amount of Freund's incomplete adjuvant is administered several times every 4 to 21 days. Appropriate carriers can also be used for immunization. After immunization as described above, the expected increase in the amount of antibody in the serum can be checked by standard methods.

對抗本發明胜肽的多株抗體可藉由從檢查血清中所望抗體增加的受免疫哺乳動物收集血液,並從血液以習知方法單離血清而製備。多株抗體包括含有該多株抗體的血清且可從該血清單離含有該多株抗體的級分(fraction)。免疫球蛋白G或M從來製備,藉由使用例如偶聯於本發明胜肽的親和管柱,與進一步使用蛋白質A或蛋白質G管柱純化該級分。 Polyclonal antibodies against the peptides of the present invention can be prepared by collecting blood from an immunized mammal whose serum is expected to increase in antibodies, and isolating the serum from the blood in a conventional manner. The polyclonal antibody includes a serum containing the polyclonal antibody and a fraction containing the polyclonal antibody can be isolated from the serum. Immunoglobulin G or M was never prepared by using, for example, an affinity column coupled to a peptide of the invention, and the fraction was further purified using a protein A or protein G column.

為了製備單株抗體用於本發明之內容,從以該抗原免疫的哺乳動物收集免疫細胞,並如上述檢查血清中所望抗體的水平是否增加,之後進行細胞融合。用於細胞融合的免疫細胞較佳為從脾臟取得。其他較佳的與上述免疫細胞融合的母細胞,包括例如哺乳動物的骨髓瘤細胞,更佳為具有以藥物選擇融合細胞的所需性質的骨髓瘤細胞。 In order to prepare a monoclonal antibody for use in the present invention, immune cells are collected from a mammal immunized with the antigen, and the level of the desired antibody in the serum is checked as described above, and then cell fusion is performed. The immune cells used for cell fusion are preferably obtained from the spleen. Other preferred mother cells fused with the above-mentioned immune cells include, for example, mammalian myeloma cells, and more preferably myeloma cells having desired properties for selecting fused cells with drugs.

上述免疫細胞及骨髓瘤細胞可依照已知方法融合,該方法例如Milstein等人的方法(Galfre and Milstein,Methods Enzymol 73:3-46(1981))。 The above-mentioned immune cells and myeloma cells can be fused according to a known method, such as the method of Milstein et al. (Galfre and Milstein, Methods Enzymol 73: 3-46 (1981)).

由細胞融合得到的融合瘤可藉由將其在標準選擇培養基例如HAT培養基(含次黃嘌呤、氨基蝶呤和胸腺嘧啶的培養基)中培養而選擇。通常該細胞培養物係在該HAT培養基中繼續培養數天至數週,時間足以使除了所望融合瘤以外的其他細胞(非融合細胞)死亡。然後,可實施標準極限稀釋以篩選並選殖生產所望抗體的融合瘤細胞。 The fusion tumor obtained by cell fusion can be selected by culturing it in a standard selection medium such as a HAT medium (a medium containing hypoxanthine, aminopterin, and thymine). Generally, the cell culture line is further cultured in the HAT medium for several days to several weeks, which is sufficient for the death of other cells (non-fusion cells) other than the desired fusion tumor. Standard limiting dilutions can then be performed to screen and breed fusion tumor cells that produce the desired antibody.

除了上述方法,其中非人類動物係以抗原免疫以製備融合瘤,可 將人類淋巴球例如受EB病毒感染者以胜肽、胜肽表現細胞或其溶解物於體外免疫。然後,將經免疫的淋巴球與能無限分裂的人類來源的骨髓瘤細胞例如U266融合,以得到生產能結合於該胜肽的所望人類抗體的融合瘤(未審查的日本公開專利申請案號昭63-17688)。 In addition to the above method, in which non-human animals are immunized with antigens to prepare fusion tumors, human lymphocytes, such as those infected with EB virus, can be immunized in vitro with peptides, peptide-expressing cells, or lysates thereof. Then, the immunized lymphocytes are fused with human-derived myeloma cells such as U266 that can divide indefinitely to obtain a fusion tumor that produces the desired human antibody capable of binding to the peptide (Unexamined Japanese Published Patent Application No. Zhao 63-17688).

接著將獲得的融合瘤移殖到小鼠的腹腔,並抽取腹水。獲得的單株抗體可利用例如硫酸銨沉澱、蛋白質A或蛋白質G管柱、DEAE離子交換層析或偶聯有本發明胜肽的親和性管柱純化。本發明抗體不僅可用於純化及偵測本發明胜肽,也可當成本發明胜肽的增效劑及拮抗劑的候選者。 The obtained fusion tumors were then transplanted into the abdominal cavity of mice and ascites fluid was extracted. The obtained monoclonal antibodies can be purified using, for example, ammonium sulfate precipitation, protein A or protein G columns, DEAE ion exchange chromatography, or affinity columns coupled with peptides of the present invention. The antibodies of the present invention can be used not only for purification and detection of the peptides of the present invention, but also as candidates for potentiators and antagonists of the peptides of the present invention.

或者,可將免疫細胞例如經免疫的淋巴球、生產抗體利用致癌基因使不死化並用於製備單株抗體。 Alternatively, immune cells such as immunized lymphocytes, antibody production can be immortalized with oncogenes and used to make monoclonal antibodies.

獲得的單株抗體也可使用遺傳工程技術以重組方式製備(參見例如Borrebaeck and Larrick,Therapeutic Monoclonal Antibodies,於英國由MacMillan Publishers LTD(1990)出版)。例如可從免疫細胞例如融合瘤或經免疫的生產該抗體的淋巴球選殖編碼為抗體的DNA,插入適當載體,並導入宿主細胞以製備重組抗體。本發明也提供如上述製備的重組抗體。 The obtained monoclonal antibodies can also be produced recombinantly using genetic engineering techniques (see, for example, Borrebaeck and Larrick, Therapeutic Monoclonal Antibodies, published by MacMillan Publishers LTD (1990) in the UK). For example, an antibody-encoding DNA can be cloned from an immune cell such as a fusion tumor or an immune lymphocyte producing the antibody, inserted into an appropriate vector, and introduced into a host cell to prepare a recombinant antibody. The present invention also provides a recombinant antibody prepared as described above.

再者本發明抗體可為抗體片段或經修飾的抗體,只要其結合於一個或更多本發明的胜肽即可。例如,該抗體片段可為Fab、F(ab')2、Fv或單鏈Fv(scFv),其中來自H及L鏈的Fv片段以適當連結子連接(Huston et al.,Proc Natl Acad Sci USA 85:5879-83(1988))。更具體而言,可利用以酵素例如木瓜酵素或胃蛋白酶處理抗體而產生抗體片段。或者可構建編碼為該抗體片段的基因,插入表現載體並於適當的宿主中表現(參見例如,Co et al.,J Immunol 152:2968-76(1994);Better與Horwitz,Methods Enzymol 178:476-96(1989);Pluckthun and Skerra,Methods Enzymol 178:497-515(1989);Lamoyi,Methods Enzymol 121:652-63(1986);Rousseaux et al.,Methods Enzymol 121:663-9(1986);Bird and Walker,Trends Biotechnol 9:132-7(1991))。 Furthermore, the antibody of the present invention may be an antibody fragment or a modified antibody as long as it binds to one or more peptides of the present invention. For example, the antibody fragment may be Fab, F (ab ') 2 , Fv, or single chain Fv (scFv), in which Fv fragments from H and L chains are linked by appropriate linkers (Huston et al. , Proc Natl Acad Sci USA 85: 5879-83 (1988)). More specifically, antibody fragments can be produced by treating the antibody with an enzyme such as papain or pepsin. Alternatively, a gene encoding the antibody fragment can be constructed, inserted into a expression vector, and expressed in an appropriate host (see, eg, Co et al. , J Immunol 152: 2968-76 (1994); Better and Horwitz, Methods Enzymol 178: 476 -96 (1989); Pluckthun and Skerra, Methods Enzymol 178: 497-515 (1989); Lamoyi, Methods Enzymol 121: 652-63 (1986); Rousseaux et al. , Methods Enzymol 121: 663-9 (1986); Bird and Walker, Trends Biotechnol 9: 132-7 (1991)).

抗體可藉由與各種分子例如聚乙二醇(PEG)接合而修飾。本發明提供此種經修飾的抗體。該經修飾的抗體可藉由將抗體化學修飾而獲得。此等修飾方法在該領域為習知。 Antibodies can be modified by conjugation to various molecules such as polyethylene glycol (PEG). The present invention provides such a modified antibody. The modified antibody can be obtained by chemically modifying the antibody. Such modification methods are well known in the art.

或者,本發明抗體可獲得為衍生自非人類抗體的可變區與衍生自人類抗體的不變區的嵌合抗體,或人類化抗體,其包括衍生自非人類抗體的互補決定區(CDR)、框架區(FR)及衍生自人類抗體的不變區。此種抗體可依照已知技術製備。人類化可藉由取代囓齒類CDR或CDR序列為人類抗體的對應序列而實施(參見例如Verhoeyen et al.,Science 239:1534-1536(1988))。因此此種人類化抗體為嵌合抗體,其中實質上少於完整的人類可變區域已取代成衍生自非人類種的對應序列。 Alternatively, the antibodies of the invention may be obtained as chimeric antibodies derived from non-human antibody variable regions and human antibody-derived constant regions, or as humanized antibodies, including complementarity determining regions (CDRs) derived from non-human antibodies. Framework regions (FR) and invariant regions derived from human antibodies. Such antibodies can be prepared according to known techniques. Humanization can be performed by substituting a rodent CDR or CDR sequence as the corresponding sequence of a human antibody (see, eg, Verhoeyen et al. , Science 239: 1534-1536 (1988)). Such humanized antibodies are therefore chimeric antibodies in which substantially less than the entire human variable region has been replaced with a corresponding sequence derived from a non-human species.

也可使用除了人類框架及不變區外包括人類可變區的完全人類抗體。此種抗體可使用該技術領域已知的各種技術製造。例如體外方法涉及使用呈現在噬菌體的人類抗體片段的重組庫(例如Hoogenboom & Winter,J.Mol.Biol.227:381(1991)。同樣地,可藉由將人類免疫球蛋白基因位導入基因轉殖動物例如內生免疫球蛋白已部分或全部失活的小鼠中,而製備人類抗體。此方法敘述於例如美國專利號6,150,584;5,545,807;5,545,806;5,569,825;5,625,126;5,633,425;5,661,016。 Fully human antibodies that include human variable regions in addition to the human framework and constant regions can also be used. Such antibodies can be made using various techniques known in the art. For example, in vitro methods involve the use of a recombinant library of human antibody fragments that are presented on phages ( e.g., Hoogenboom & Winter, J. Mol. Biol. 227: 381 (1991). Similarly, human immunoglobulin loci can be introduced into a gene transfection Animal antibodies such as mice in which endogenous immunoglobulins have been partially or completely inactivated are used to prepare human antibodies. This method is described, for example, in US Patent Nos. 6,150,584; 5,545,807; 5,545,806; 5,569,825; 5,625,126; 5,633,425; 5,661,016.

如上獲得的抗體可純化成同質。例如可依照一般蛋白質使用的單離及純化方法將抗體單離及純化。例如可利用適當選擇及合併使用的管柱層析單離及單離抗體,管柱層析例如親和性層析、過濾、超過濾、鹽析、透析、SDS聚丙烯醯胺凝膠電泳及等電點集中法(Antibodies:A Laboratory Manual.Ed Harlow and David Lane,Cold Spring Harbor Laboratory(1988)),但不限於此等。可使用蛋白質A管柱及蛋白質G管柱當做該親和性管柱。示例之可使用的蛋白質A 管柱包括例如Hyper D、POROS及Sepharose F.F.(Pharmacia)。 The antibodies obtained above can be purified to homogeneity. For example, antibodies can be isolated and purified according to the isolation and purification methods used for general proteins. For example, column chromatography can be used with appropriate selection and combined use of isolation and antibody, column chromatography such as affinity chromatography, filtration, ultrafiltration, salting-out, dialysis, SDS polyacrylamide gel electrophoresis, etc. Electric point concentration method (Antibodies: A Laboratory Manual. Ed Harlow and David Lane, Cold Spring Harbor Laboratory (1988)), but is not limited thereto. As the affinity column, a protein A column and a protein G column can be used. Exemplary protein A columns that can be used include, for example, Hyper D, POROS, and Sepharose F.F. (Pharmacia).

親和層析以外的適合之層析技術的例子,包括例如離子交換層析、疏水性層析、凝膠過濾、反相層析、吸附層析等(Strategies for Protein Purification and Characterization:A Laboratory Course Manual.Ed Daniel R.Marshak et al.,Cold Spring Harbor Laboratory Press(1996))。該等層析程序可利用液相層析,例如HPLC與FPLC實施。 Examples of suitable chromatography techniques other than affinity chromatography include, for example, ion exchange chromatography, hydrophobic chromatography, gel filtration, reversed phase chromatography, adsorption chromatography, etc. (Strategies for Protein Purification and Characterization: A Laboratory Course Manual Ed Daniel R. Marshak et al. , Cold Spring Harbor Laboratory Press (1996)). These chromatography procedures can be performed using liquid chromatography, such as HPLC and FPLC.

例如可使用測量吸光度、ELISA、酵素免疫分析法(EIA)、放射免疫分析法(RIA)及/或免疫螢光以測量本發明抗體的抗原結合活性。ELISA中,係將本發明抗體固定化在一平板上,塗佈本發明胜肽於該平板,然後塗佈含有所望抗體的樣本,例如抗體產生細胞的培養上清或純化的抗體。然後,將辨識該初級抗體的二次抗體以酵素例如鹼性磷解酶標記,然後溫育該平板。清洗後,添加酵素受質例如對硝基苯基磷酸酯到該平板,測量吸光度以評估該樣本的抗原結合活性。可使用該胜肽的片段例如C末端或N端片段當做抗原以評估該抗體的結合活性。可使用BIAcore(Pharmacia)來評估本發明抗體的活性。 For example, measurement of absorbance, ELISA, enzyme immunoassay (EIA), radioimmunoassay (RIA), and / or immunofluorescence can be used to measure the antigen-binding activity of the antibodies of the invention. In the ELISA, the antibody of the present invention is immobilized on a plate, the peptide of the present invention is coated on the plate, and then a sample containing a desired antibody, such as a culture supernatant of a antibody-producing cell or a purified antibody, is coated. Then, the secondary antibody recognizing the primary antibody is labeled with an enzyme such as alkaline phosphatase, and then the plate is incubated. After washing, an enzyme substrate such as p-nitrophenyl phosphate is added to the plate, and the absorbance is measured to evaluate the antigen-binding activity of the sample. A fragment of the peptide, such as a C-terminal or N-terminal fragment, can be used as an antigen to evaluate the binding activity of the antibody. BIAcore (Pharmacia) can be used to assess the activity of the antibodies of the invention.

上述方法,藉由使本發明抗體暴露於假定含有本發明胜肽的樣本,並偵測或測量該抗體與該胜肽形成的免疫複合體,能偵測或測量本發明的胜肽。 The above method can detect or measure the peptide of the present invention by exposing the antibody of the present invention to a sample presumed to contain the peptide of the present invention and detecting or measuring an immune complex formed by the antibody and the peptide.

由於根據本發明之偵測或測量本發明胜肽的方法能夠專一性偵測或測量一胜肽,故該方法有用於使用該胜肽的許多實驗中。 Since the method for detecting or measuring the peptide of the present invention can specifically detect or measure a peptide, the method is useful in many experiments using the peptide.

舉例來說,當從病患獲得的癌細胞或組織中偵測到本發明之胜肽時,將預期對抗它們的Th1細胞(或CTL細胞)可做為癌症免疫療法的有效工具。 For example, when a peptide of the invention is detected from cancer cells or tissues obtained from a patient, Th1 cells (or CTL cells) that are expected to combat them can be used as an effective tool for cancer immunotherapy.

XI.載體與宿主細胞 XI. Vectors and host cells

本發明也提供導入有編碼為本發明胜肽的核苷酸的載體與宿主細胞。本發明的載體在攜帶核苷酸尤其是本發明DNA到宿主細胞以表現本發明之胜肽,或 投予本發明核苷酸供基因治療為有用。 The present invention also provides a vector and a host cell into which a nucleotide encoding a peptide of the present invention is introduced. The vector of the present invention is useful for carrying nucleotides, particularly DNA of the present invention, to a host cell to express a peptide of the present invention, or administration of the nucleotides of the present invention for gene therapy.

當選用宿主細胞為E.coli且載體在E.coli(例如JM109、DH5α、HB101或XL1Blue)中大量放大及生產時,該載體應具有欲在E.coli中放大的「ori」以及用於選擇經轉形的E.coli的標誌基因(例如由安皮西林、四環黴素、嘉那黴素、氯黴素等藥物選擇的抗藥性基因)。例如,可使用M13系列載體、pUC系列載體、pBR322、pBluescript、pCR-Script等。此外,也可使用pGEM-T、pDIRECT及pT7次選殖及萃取cDNA及上述載體。當使用載體產生本發明蛋白質時,表現載體為有用。例如欲在E.coli中表現的載體應具有上述欲在E.coli中擴增需要的特性。當使用E.coli例如JM109、DH5α、HB101或XL1 Blue當做宿主細胞,該載體應具有啟動子例如lacZ啟動子(Ward et al.,Nature 341:544-6(1989);FASEB J 6:2422-7(1992))、araB啟動子(Better et al.,Science 240:1041-3(1988))、T7啟動子等。其能有效率地在E.coli中表現所望的基因。於此方面,可使用pGEX-5X-1(Pharmacia)、「QIAexpress system」(Qiagen)、pEGFP及pET(於此情形,宿主較佳為表現T7 RNA聚合酶的BL21)取代上述載體。此外,該載體也可含有訊號序列以供胜肽分泌。引導該胜肽分泌到E.coli胞間質之示例的訊號序列,為pelB訊號序列(Lei et al.,J Bacteriol 169:4379(1987))。將該等載體導入目標宿主細胞的方法包括例如氯化鈣法及電穿孔法。 When selecting the host cell is E.coli and the carrier in E.coli (e.g. JM109, DH5α, HB101 or XLlBlue) amplification and production of a large number, the vector should have to be amplified in E.coli "ori" for selecting Transformed marker genes of E. coli (for example, resistance genes selected by drugs such as ampicillin, tetracycline, kanamycin, and chloramphenicol). For example, M13 series vectors, pUC series vectors, pBR322, pBluescript, pCR-Script, etc. can be used. In addition, pGEM-T, pDIRECT, and pT7 can also be used for colonization and extraction of cDNA and the above-mentioned vectors. When a vector is used to produce a protein of the invention, a performance vector is useful. For example, a vector to be expressed in E.coli should have the above-mentioned characteristics required to be amplified in E.coli . When E. coli such as JM109, DH5α, HB101 or XL1 Blue is used as a host cell, the vector should have a promoter such as the lacZ promoter (Ward et al. , Nature 341: 544-6 (1989); FASEB J 6: 2422- 7 (1992)), the araB promoter (Better et al. , Science 240: 1041-3 (1988)), the T7 promoter, and the like. It can efficiently express the desired gene in E.coli . In this regard, pGEX-5X-1 (Pharmacia), "QIAexpress system" (Qiagen), pEGFP and pET (in this case, the host is preferably BL21 expressing T7 RNA polymerase) may be used in place of the above vector. In addition, the vector may also contain signal sequences for peptide secretion. An exemplary signal sequence for secreting the peptide into the E.coli intercellular substance is the pelB signal sequence (Lei et al. , J Bacteriol 169: 4379 (1987)). Methods for introducing these vectors into a target host cell include, for example, a calcium chloride method and an electroporation method.

除了E.coli,例如可使用衍生自哺乳動物的表現載體(例如pcDNA3(Invitrogen)及pEGF-BOS(Nucleic Acids Res 18(17):5322(1990))、pEF、pCDM8)、衍生自昆蟲細胞的表現載體(例如「Bac-to-BAC baculovirus expression system」(GIBCO BRL)、pBacPAK8)、衍生自植物的表現載體(例如pMH1、pMH2)、衍生自動物病毒的表現載體(例如pHSV、pMV、pAdexLcw)、衍生自反轉錄病毒的表現載體(例如pZIpneo)、衍生自酵母菌的表現載體(例如「Pichia Expression Kit」(Invitrogen)、pNV11、SP-Q01),及衍生自枯草芽孢桿菌(Bacillus subtilis)的表現載體(例如pPL608、pKTH50),用於生產本發明之多胜肽。 In addition to E. coli , for example, mammalian-derived expression vectors (e.g., pcDNA3 (Invitrogen) and pEGF-BOS (Nucleic Acids Res 18 (17): 5322 (1990)), pEF, pCDM8), insect cell-derived Expression vectors (e.g. `` Bac-to-BAC baculovirus expression system '' (GIBCO BRL), pBacPAK8), plant-derived expression vectors (e.g. pMH1, pMH2), animal virus-derived expression vectors (e.g. pHSV, pMV, pAdexLcw) , Expression vectors derived from retroviruses (e.g. pZIpneo), expression vectors derived from yeast (e.g. "Pichia Expression Kit" (Invitrogen), pNV11, SP-Q01), and those derived from Bacillus subtilis Expression vectors (eg, pPL608, pKTH50) are used to produce the peptides of the present invention.

為了於動物細胞例如CHO、COS或NIH3T3細胞中表現載體,該載體應具有對於在此種細胞中表現所需要的啟動子例如SV40啟動子(Mulligan et al.,Nature 277:108(1979))、MMLV-LTR啟動子、EF1α啟動子(Mizushima et al.,Nucleic Acids Res 18:5322(1990))、CMV啟動子等,較佳為具有用於選擇轉形體的標記基因(例如由藥物(例如新黴素、G418)選擇的抗藥性基因)。具有此等特性的已知載體的例子包括,例如pMAM、pDR2、pBK-RSV、pBK-CMV、pOPRSV及pOP13。 In order to express a vector in animal cells such as CHO, COS or NIH3T3 cells, the vector should have a promoter such as the SV40 promoter required for expression in such cells (Mulligan et al. , Nature 277: 108 (1979)), MMLV-LTR promoter, EF1α promoter (Mizushima et al. , Nucleic Acids Res 18: 5322 (1990)), CMV promoter, etc., preferably with a marker gene for selection of a transformant (e.g., by a drug (e.g., new) Mycin, G418) resistance gene of choice). Examples of known vectors having these characteristics include, for example, pMAM, pDR2, pBK-RSV, pBK-CMV, pOPRSV, and pOP13.

XII.胜肽媒介的Th1反應的監測 XII. Monitoring of Th1 response of peptide-mediated

透過TCR-α和-β基因的深cDNA序列分析,顯示在經本發明的胜肽刺激的Th細胞中,特定的基因對的頻率增加。因此,當在接種經本發明的胜肽疫苗後的個體中偵測到這樣的基因對時,其顯示胜肽專一性的Th1反應在個體中被誘導。因此,在經本發明的胜肽刺激的Th細胞中,特定的基因對的增加可作為在經刺激後監測或偵測個體中的Th1反應的替代(surrogate)標記。在本發明的背景中,「胜肽專一性的Th1反應」理解為,意指形成在α和β次單元對之間的TCR專一地辨認形成在本發明的胜肽和HLA分子之間的複合體。如上述所討論的,即使在胺基酸修飾之後,仍可維持以本發明的特定序列所界定的胜肽的Th1細胞誘導能力。因此,除了經專一性的胜肽刺激外,即使當Th1細胞被突變的胜肽誘導時,其抗原專一性被認為是「胜肽專一性」,只要前述的TCR專一地辨認由原始胜肽所形成的這樣的複合體。 Deep cDNA sequence analysis of the TCR-α and -β genes revealed that the frequency of specific gene pairs increased in Th cells stimulated with the peptides of the present invention. Therefore, when such a gene pair is detected in an individual vaccinated with the peptide vaccine of the present invention, it shows that the peptide-specific Th1 response is induced in the individual. Therefore, in Th cells stimulated with the peptides of the present invention, the increase in specific gene pairs can serve as a surrogate marker for monitoring or detecting Th1 responses in individuals after stimulation. In the context of the present invention, "peptide-specific Th1 response" is understood to mean that the TCR formed between the α and β subunit pair specifically recognizes the complex formed between the peptide of the present invention and the HLA molecule body. As discussed above, even after amino acid modification, the Th1 cell-inducing ability of the peptides defined by the specific sequences of the present invention can be maintained. Therefore, in addition to being stimulated with specific peptides, even when Th1 cells are induced by mutant peptides, their antigenic specificity is considered to be "peptide specificity", as long as the aforementioned TCR specifically recognizes the original peptide. The formation of such a complex.

舉例而言,在經MPHOSPH1-LP1(MPHOSPH1272-298-LP)刺激的Th細胞中,以HLA-DR9限制的方式增加TCR-α及-β次單元,每個TCR-α及-β次單元分別具有由序列識別號:9和19的胺基酸序列所組成的CDR3(第6圖)。因此,個體的Th細胞族群的累積顯示,在接種MPHOSPH1-LP1疫苗的個體中成功地誘導 被MPHOSPH1-LP1媒介的Th1反應。可藉由以抗體為依據的分析偵測由序列識別號:9和19的胺基酸序列所組成的CDR3的存在。在本案的另一實施例中,也可藉由偵測編碼TCR-α和-β次單元的聚核苷酸,來估計特定的TCR-α和-β次單元對。舉例而言,分別以序列識別號:29和30的核苷酸序列代表編碼每個由序列識別號:9和19的胺基酸序列所組成的CDR3的聚核苷酸。因此,由編碼MPHOSPH1-專一性TCR的α和β次單元之mRNA合成的每個cDNA可分別包含序列識別號:29和30的核苷酸序列。可藉由以PCR為依據的分析來偵測這樣的聚核苷酸。 For example, in Th cells stimulated by MPHOSPH1-LP1 (MPHOSPH1 272-298- LP ), TCR-α and -β subunits are increased in a HLA-DR9 restricted manner, each TCR-α and -β subunit Each has a CDR3 consisting of the amino acid sequences of sequence identification numbers: 9 and 19 (Figure 6). Thus, the accumulation of Th cell populations in individuals shows that Th1 responses mediated by MPHOSPH1-LP1 were successfully induced in individuals vaccinated with MPHOSPH1-LP1 vaccine. The presence of CDR3 consisting of the amino acid sequences of sequence identification numbers: 9 and 19 can be detected by antibody-based analysis. In another embodiment of the present invention, specific TCR-α and -β subunit pairs can also be estimated by detecting polynucleotides encoding the TCR-α and -β subunits. For example, the nucleotide sequences with sequence identification numbers: 29 and 30 respectively represent polynucleotides encoding each of the CDR3 composed of the amino acid sequences of sequence identification numbers: 9 and 19. Therefore, each cDNA synthesized from mRNA encoding the alpha and beta subunits of MPHOSPH1-specific TCR may contain the nucleotide sequences of sequence identification numbers: 29 and 30, respectively. Such polynucleotides can be detected by PCR-based analysis.

在一較佳實施例中,本發明提供一種在以胜肽免疫的個體中監測、評定或評估胜肽-專一性Th1反應的方法,其包含步驟:(a)提供取自經投予胜肽的個體的樣本,其中樣本包含T細胞;(b)偵測在樣本中T細胞的存在,T細胞表現結合於MHC第II類分子與胜肽或其片段之複合體的TCR;及(c)當在(b)中偵測到T細胞的存在時,顯示對胜肽專一性的Th1反應的誘導。 In a preferred embodiment, the present invention provides a method for monitoring, assessing, or evaluating a peptide-specific Th1 response in an individual immunized with a peptide, comprising the steps of: (a) providing a peptide obtained from administration of the peptide A sample of an individual, wherein the sample comprises T cells; (b) detecting the presence of T cells in the sample, and the T cells exhibiting TCR that binds to a complex of a MHC class II molecule and a peptide or a fragment thereof; and (c) When the presence of T cells was detected in (b), induction of a peptide-specific Th1 response was shown.

舉例而言,藉由偵測由序列識別號:9和19的胺基酸序列所組成的α-和β-次單元,可偵測以HLA-DR9限制的方式誘導的對MPHOSPH1-LP1(MPHOSPH1272-298-LP)專一的T細胞。 For example, by detecting α- and β-subunits consisting of the amino acid sequences of sequence identification numbers: 9 and 19, it is possible to detect MPHOSPH1-LP1 (MPHOSPH1) induced in a HLA-DR9 restricted manner. 272-298-LP ) specific T cells.

在本發明中,只要Th1細胞包含在樣本中,取自個體的任何生物樣本都可用於監測Th1反應。舉例而言,就本發明的目的而言,血液或衍生自血液的樣本可做為生物樣本使用。在本發明中,衍生自血液的樣本包含包括T細胞的細胞族群。包括T細胞的細胞族群的取得方法為本發明所屬技術領域中具有通常知識者所熟知。或者,在一些實施例中,以經T細胞滲入的組織或淋巴結做為生物樣本也是有用的。 In the present invention, as long as Th1 cells are contained in a sample, any biological sample taken from an individual can be used to monitor the Th1 response. For example, for the purposes of the present invention, blood or blood-derived samples can be used as biological samples. In the present invention, a blood-derived sample includes a cell population including T cells. The method for obtaining a cell population including T cells is well known to those having ordinary knowledge in the technical field to which the present invention pertains. Alternatively, in some embodiments, a tissue or lymph node infiltrated by T cells is also useful as a biological sample.

在本發明的一些實施例中,包含T細胞的細胞族群可被固定,以 在評估TCR次單元中用於以抗體為依據的分析。在與固定的細胞接觸後,抗體辨認固定的細胞中α和β次單元的CDR3,且當抗體結合至單一細胞上的兩者TCR次單元時,那麼可偵測用一對特定的次單元形成的TCR-抗體複合體。或者,在以核苷酸序列為依據的分析中,由編碼TCR次單元的聚核苷酸合成的擴增子(amplicon)在單一細胞中的累積顯示,一對特定的次單元存在。或者,可藉由如Fang H,et al,Oncoimmunology 3:e968467,2015所示的深cDNA序列分析,監測一對編碼TCR次單元的特定聚核苷酸,其用於免疫疫苗每個胜肽。 In some embodiments of the invention, a population of cells comprising T cells can be immobilized for use in antibody-based analysis in the evaluation of TCR subunits. After contacting the fixed cells, the antibody recognizes the CDR3 of the α and β subunits in the fixed cells, and when the antibody binds to both TCR subunits on a single cell, it can detect the formation of a specific pair of subunits TCR-antibody complex. Alternatively, in a nucleotide sequence-based analysis, the accumulation of amplicons synthesized from polynucleotides encoding TCR subunits in a single cell shows that a specific pair of subunits exists. Alternatively, a pair of specific polynucleotides encoding TCR subunits can be monitored by deep cDNA sequence analysis as shown in Fang H, et al, Oncoimmunology 3: e968467, 2015, which is used to immunize each peptide of a vaccine.

在這方面而言,熟知的是,Th1細胞上的TCR的結構多樣性主要取決於其CDR3。因此,抗原專一性也取決於CDR3。因此,可透過CDR3偵測,監測在單一細胞上一對特定的α和β次單元的存在。在本發明的一些實施例中,為了監測或評估Th1反應,在免疫疫苗之後,可偵測一對特定的TCR-α和-β次單元至少一次或更多次。當透過監測,這對以時間依存的方式增加時,其意指,充分地誘導個體中胜肽媒介的Th1反應。或者,當偵測這特定的一對至少一次時,其顯示,個體中發生Th1反應。 In this regard, it is well known that the structural diversity of TCRs on Th1 cells depends primarily on their CDR3. Therefore, antigen specificity also depends on CDR3. Therefore, CDR3 detection can be used to monitor the presence of a specific pair of α and β subunits on a single cell. In some embodiments of the invention, in order to monitor or evaluate the Th1 response, a specific pair of TCR-α and -β subunits can be detected at least one or more times after immunizing the vaccine. When the pair increases in a time-dependent manner through monitoring, it means that the Th1 response of the peptide-mediated agent in the individual is sufficiently induced. Alternatively, when this particular pair is detected at least once, it shows that a Th1 response occurs in the individual.

以下參考具體的實施例對於本發明更詳細敘述。然而,以下材料、方法及實施例係可協助該技術領域中具有通常知識者製造及使用本發明特定具體例,此等僅是意欲來解說本發明態樣,因此並不限制本發明的範圍。該技術領域中具有通常知識者當可輕易理解到,與在此所述者類似或等同之方法及材料可用於實施或測試本發明。 The invention is described in more detail below with reference to specific examples. However, the following materials, methods, and examples can assist those skilled in the art to make and use the specific examples of the present invention. These are only intended to explain aspects of the present invention, and thus do not limit the scope of the present invention. Those skilled in the art can easily understand that methods and materials similar or equivalent to those described herein can be used to implement or test the present invention.

[實施例] [Example]

材料與方法 Materials and Methods

細胞株 Cell line

收集並使用來自健康捐贈者(healthy donor,HD)和癌症病患的PBMC的研究計畫(research protocol)經過熊本大學人體試驗委員會(Institutional Review Board of Kumamoto University)核可。在取得知情同意書(written informed consent)之後,自HD和癌症病患取得PBMC。如先前所報導(Tomita Y,et al.,Cancer Sci.2011;102(1):71-78;Omita Y,et al.,Clin Cancer Res.2013;19(16):4508-4520;Tomita Y,et al.,Int J Cancer 2014;134(2):352-366;Tomita Y,et al.,Oncoimmunology.2014;3:e28100;Sayem MA,et al.,Oncoimmunolgy.2016;5(1):e1062209;Hirayama M,et al.,Oncoimmunology.2016;5(6):e1123368),產生人類單核球-衍生的DC和小鼠BM-衍生的DC。小鼠纖維母細胞株(L-細胞),其經過基因改造以表現DR4(DRB1*04:05),L-DR4;DR8(DRB1*08:03),L-DR8;DR9(DRB1*09:01),L-DR9;DR15(DRB1*15:02),L-DR15;DR53(DRB4*01:03),L-DR53;DP2(DPA1*01:03/DPB1*02:01),L-DP2;DP4(DPA1*01:03/DPB1*04:01),RM3-DP4;DP5(DPA1*02:02/DPB1*05:01),L-DP5;及DP9(DPB1*09:01)和L-DP9是由Alessandro Sette博士(La Jolla Institute for Allergy and Immunology,CA,USA)提供,且作為APC。 The research protocol for collecting and using PBMCs from healthy donors (HD) and cancer patients was approved by the Institutional Review Board of Kumamoto University. PBMC were obtained from HD and cancer patients after written informed consent was obtained. As previously reported (Tomita Y, et al., Cancer Sci. 2011; 102 (1): 71-78; Omita Y, et al., Clin Cancer Res. 2013; 19 (16): 4508-4520; Tomita Y , et al., Int J Cancer 2014; 134 (2): 352-366; Tomita Y, et al., Oncoimmunology. 2014; 3: e28100; Sayem MA, et al., Oncoimmunolgy. 2016; 5 (1): e1062209; Hirayama M, et al., Oncoimmunology. 2016; 5 (6): e1123368), producing human monocyte-derived DC and mouse BM-derived DC. Mouse fibroblast cell line (L-cell), which has been genetically engineered to express DR4 (DRB1 * 04: 05), L-DR4; DR8 (DRB1 * 08: 03), L-DR8; DR9 (DRB1 * 09: 01), L-DR9; DR15 (DRB1 * 15: 02), L-DR15; DR53 (DRB4 * 01: 03), L-DR53; DP2 (DPA1 * 01: 03 / DPB1 * 02: 01), L- DP2; DP4 (DPA1 * 01: 03 / DPB1 * 04: 01), RM3-DP4; DP5 (DPA1 * 02: 02 / DPB1 * 05: 01), L-DP5; and DP9 (DPB1 * 09: 01) and L-DP9 was provided by Dr. Alessandro Sette (La Jolla Institute for Allergy and Immunology, CA, USA) and is used as APC.

預測HLA第II類結合胜肽 Prediction of HLA class II binding peptides

為了預測有潛力的混雜的HLA第II類結合人類MPHOSPH1-衍生的胜肽,將該人類MPHOSPH1蛋白質之胺基酸序列使用最近發展的電腦演算法(IEDB analysis analysis resource,consensus method,http://tools.immuneepitope.org/analyze/html/mhc_II_binding.html)(Wang P,et al.,BMC Bioinformatics 2010;11:568.Wang P,et al.PLoS Comput Biol 2008;4:e1000048)來分析。該程序分析15個胺基酸長的序列偏移量(offset)以包括完整之MPHOSPH1蛋白質。選擇並合成27及26個胺基酸長的胜肽,MPHOSPH1272-298-LP(MPHOSPH1-LP1;WVSFFEIYNEYIYDLFVPVSSKFQKRK)及MPHOSPH1326-351-LP(MPHOSPH1-LP2;AYRLLKLGIKHQSVAFTKLNNASSRS),其對於由DRB1*04:05、DRB1*09:01或DRB1*15:02、DPB1*02:01及DPB1*05:01對偶基因編碼之 多個HLA第II類分子具有相對低的一致性百分等級,且上述中的兩者包含MPHOSPH1-衍生的9員或10員的CTL抗原決定位(MPHOSPH-A2282-291及/或MPHOSPH1-A24278-286)(第1圖及表1)。 In order to predict the potential hybrid HLA class II binding to human MPHOSPH1-derived peptides, the amino acid sequence of the human MPHOSPH1 protein was developed using a recently developed computer algorithm (IEDB analysis analysis resource, consensus method, http: /// tools.immuneepitope.org/analyze/html/mhc_II_binding.html) (Wang P, et al., BMC Bioinformatics 2010; 11: 568. Wang P, et al. PLoS Comput Biol 2008; 4: e1000048). This program analyzes 15 amino acid long sequence offsets to include the complete MPHOSPH1 protein. Select and synthesize 27 and 26 amino acid long peptides, MPHOSPH1 272-298 -LP (MPHOSPH1-LP1; WVSFFEIYNEYIYDLFVPVSSKFQKRK) and MPHOSPH1 326-351 -LP (MPHOSPH1-LP2; AYRLLKLGIKHQSVAFTKLNNASSRS), which is: 05. DRB1 * 09: 01 or DRB1 * 15: 02, DPB1 * 02: 01 and DPB1 * 05: 01 multiple HLA class II molecules encoded by dual genes have relatively low percent identity, and the above both contain MPHOSPH1- derivative 9 or 10 bits of the CTL epitope (MPHOSPH-A2 282-291 and / or MPHOSPH1-A24 278-286) (FIG. 1 and table 1).

針對指出之HLA-第II類分子的胜肽-結合演演算法分數,係以每15員MPHOSPH1-衍生的重複胜肽表示。 The peptide-binding algorithm scores for the indicated HLA-type II molecules are expressed as repeating peptides derived from MPHOSPH1-derived every 15 members.

針對指出之HLA-第II類分子的胜肽-結合演算法分數,係以每15員MPHOSPH1-衍生的重複胜肽表示。 The peptide-binding algorithm scores for the indicated HLA-type II molecules are expressed as repeating peptides derived from MPHOSPH1-derived every 15 members.

合成胜肽及重組蛋白質 Synthesis of peptides and recombinant proteins

合成2種由HLA-A2(MPHOSPH1-A2282-291)(Nishiu M,et al.,Jpn J Cancer Res.2002 Aug;93(8):894-901)或HLA-A24(MPHOSPH1-A24278-286)(Kanehira M,et al.,Cancer Res.2007;67:3276-85)所呈現的人類MPHOSPH1-衍生SP及兩個LP(MPHOSPH1-LP1及MPHOSPH1-LP2)(MBL,Nagoya,Japan;純度>95%;第1B 圖)。使用結合於HLA-A2(HIV-A2)或HLA-A24(HIV-A24)之人類免疫缺乏病毒(HIV)SPs,作為負對照SP(Nishiu M,et al.Jpn J Cancer Res.2002 Aug;93(8):894-901;Tomita Y,et al.,Cancer Sci 2011;102:697-705)。將胜肽以10mg/mL的濃度溶於二甲基亞碸,並保存在攝氏-80度。在根據廠商說明書以編碼MPHOSPH1和DEPDC1的pET28a載體(Novagen,69864-3)轉形的大腸桿菌(Escherichia coli)BL21中,生產重組的人類全長MPHOSPH1蛋白質和DEPDC1蛋白質。藉由聚丙烯醯胺膠體電泳(SDS-PAGE)評定MPHOSPH1和DEPDC1蛋白質兩者,且藉由HisTrap FF管柱將其純化(GE Healthcare,Little Chalfont,Buckinghamshire,UK)。DEPDC1蛋白質作為負對照。 Synthesis of 2 kinds of HLA-A2 (MPHOSPH1 A2-282-291 ) (Nishiu M, et al, Jpn J Cancer Res.2002 Aug; 93 (8):. 894-901) or HLA-A24 (MPHOSPH1-A24 278- 286 ) (Kanehira M, et al., Cancer Res. 2007; 67: 3276-85) as shown in human MPHOSPH1-derived SP and two LPs (MPHOSPH1-LP1 and MPHOSPH1-LP2) (MBL, Nagoya, Japan; purity >95%; Figure 1B). Human immunodeficiency virus (HIV) SPs bound to HLA-A2 (HIV-A2) or HLA-A24 (HIV-A24) were used as negative control SPs (Nishiu M, et al. Jpn J Cancer Res. 2002 Aug; 93 (8): 894-901; Tomita Y, et al., Cancer Sci 2011; 102: 697-705). The peptide was dissolved in dimethyl sulfene at a concentration of 10 mg / mL and stored at -80 ° C. Recombinant human full-length MPHOSPH1 protein and DEPDC1 protein were produced in Escherichia coli BL21 transformed with pET28a vector (Novagen, 69864-3) encoding MPHOSPH1 and DEPDC1 according to the manufacturer's instructions. Both MPHOSPH1 and DEPDC1 proteins were evaluated by polyacrylamide colloid electrophoresis (SDS-PAGE), and purified by HisTrap FF columns (GE Healthcare, Little Chalfont, Buckinghamshire, UK). DEPDC1 protein served as a negative control.

自健康捐贈者產生抗原專一性CD4+ T細胞 Generation of antigen-specific CD4 + T cells from healthy donors

收集與使用衍生自健康捐贈者之PBMC的研究計畫經過熊本大學人體試驗委員會核可。本案發明人從7名具有知情同意書的健康捐贈者獲得PBMC樣本。HLA-A、DRB1及DPB1對偶基因的基因型鑑定(genotyping)是在HLA實驗室中實施(Kyoto,Japan)(表2)。將前述方式進行一些修飾(Tomita Y,et al.,Clin Cancer Res 2013;19:4508-20;Tomita Y,et al.,Int J Cancer 2014;134:352-66;Tomita Y,et al.,OncoImmunology 2014;3:e28100;Sayem MA,et al.,OncoImmunology 2016;5:e1062209;Hirayama M,et al.,OncoImmunology 2016;5:6,e1123368;Inoue M,et al.,Int J Cancer 2010;127:1393-403),實施抗原專一性CD4+ T細胞的誘導。藉由磁性微珠以陽性篩選來從PBMC純化CD4+ T細胞(Miltenyi Biotec,Auburn,CA,USA)(Inoue M,et al.Int J Cancer 2010;127:1393-403)。經由如前述方式之體外培養從CD14+細胞生產單核球來源的樹狀細胞(DC)(Harao M,et al.Int J Cancer 2008;123:2616-25.),並將其作為APC以誘導抗原專一性CD4+ T細胞。以10micro-g/mL的LP脈衝DC(1 X 104/井)三小時並輻射DC(45Gy),接著在96井、平底培養盤的每一井中,於200micro-L的補充5%未經補充之(decomplemented)人類血 血漿之AIM-V中,與CD4+T細胞(3 X 104/井)混合。七天之後,從每個培養中移除一半的培養液,且加入含有以胜肽(10micro-g/mL)和5ng/mL重組人類介白素7(recombinant human interleukin 7,rhIL-7)脈衝的經輻射(50Gy)自體PBMC(1 X 105)的新鮮培養液(100micro-L/井)。以胜肽第二次刺激之後兩天,將rhIL-2加入每一井(10IU/mL)中。一個星期後,在IFN-γ ELISPOT分析中,分析每一井中經刺激的CD4+T細胞的專一性。對同源(cognate)胜肽顯示專一性反應的T細胞被移至24井盤,且以週為間隔,在補充rhIL-2(20IU/mL)和rhIL-7(5ng/mL)的培養液中,用經胜肽脈衝的經輻射自體PBMC(1 X 106/井),再刺激那些T細胞。有些情形,會利用極限稀釋將T細胞選殖,以供前述進一步的研究(Tabata H,et al.Hum Immunol 1998;59:549-60)。 The research plan for the collection and use of PBMCs derived from health donors was approved by the Human Test Committee of Kumamoto University. The inventor of this case obtained PBMC samples from 7 healthy donors with informed consent. The genotyping of HLA-A, DRB1 and DPB1 dual genes was performed in the HLA laboratory (Kyoto, Japan) (Table 2). Some modifications were made to the aforementioned manner (Tomita Y, et al., Clin Cancer Res 2013; 19: 4508-20; Tomita Y, et al., Int J Cancer 2014; 134: 352-66; Tomita Y, et al., OncoImmunology 2014; 3: e28100; Sayem MA, et al., OncoImmunology 2016; 5: e1062209; Hirayama M, et al., OncoImmunology 2016; 5: 6, e1123368; Inoue M, et al., Int J Cancer 2010; 127 : 1393-403) to induce antigen-specific CD4 + T cells. CD4 + T cells (Miltenyi Biotec, Auburn, CA, USA) were purified from PBMCs by positive screening with magnetic microbeads (Inoue M, et al. Int J Cancer 2010; 127: 1393-403). Mononuclear sphere-derived dendritic cells (DC) were produced from CD14 + cells in vitro as described above (Harao M, et al. Int J Cancer 2008; 123: 2616-25.) And used as APC to induce Antigen-specific CD4 + T cells. 10 micro-g / mL LP pulsed DC (1 X 10 4 / well) for three hours and radiated DC (45 Gy), then in each well of a 96-well, flat-bottomed dish, supplemented with 200 micro-L at 5% without AIM-V supplemented with human blood plasma was mixed with CD4 + T cells (3 X 10 4 / well). Seven days later, half of the culture broth was removed from each culture, and pulses containing recombinant human interleukin 7 (rhIL-7) pulsed with peptide (10micro-g / mL) and 5ng / mL were added. irradiated (50Gy) fresh medium (100micro-L / well) autologous PBMC (1 X 10 5) is. Two days after the second stimulation with peptide, rhIL-2 was added to each well (10 IU / mL). One week later, the specificity of stimulated CD4 + T cells in each well was analyzed in an IFN-γ ELISPOT analysis. T cells showing a specific response to cognate peptides were moved to 24-well plates at weekly intervals in a culture medium supplemented with rhIL-2 (20IU / mL) and rhIL-7 (5ng / mL) In the experiment, those T cells were restimulated with irradiated autologous PBMCs (1 × 10 6 / well) pulsed with peptides. In some cases, T cells will be colonized by limiting dilution for further research as described above (Tabata H, et al. Hum Immunol 1998; 59: 549-60).

a對MPHOSPH1-LP專一性的Th細胞衍生自健康捐贈者(HD1、HD2、HD3、HD4、HD6及HD7)的PMBC。 a Th cells specific for MPHOSPH1-LP are derived from PMBCs from healthy donors (HD1, HD2, HD3, HD4, HD6 and HD7).

T細胞對於胜肽及蛋白質的反應的評估 Evaluation of T cell responses to peptides and proteins

使用IFN-γ酵素連結免疫點分析法(ELISPOT)(BD Biosciences),如前述(Tomita Y,et al.Cancer Sci 2011;102:697-705)評估Th細胞對於經過胜肽脈衝的經輻射的APC之免疫反應。簡言之,分析每3 X 104個散裝CD4+ T細胞在以有經 過胜肽脈衝之經輻射的PBMC(3 X 104個細胞/井)刺激時,或每1 X 104個散裝CD4+ T細胞在以有經過胜肽脈衝之HLA-DP或HLA-DR-表現的L細胞(5 X 104/井)刺激時,胜肽專一性CD4+ T細胞產生IFN-γ的頻率。為了判定藉由HLA分子參與抗原呈現的限制,藉由添加抗HLA-AR單株抗體(mAb)(L243,BioLegend)、抗HLA-DP mAb(B7/21,Abcam)、抗人類HLA-DQ mAb(SPV-L3,Abcam)或抗HLA第I類mAb(W6/32,Abcam),探討抗原誘導之IFN-γ生產的阻礙。以5micro-g/mL的最終濃度使用所有的mAb。以三重複或二重複執行所有的IFN-γ ELISPOT分析的評定,且結果以平均+/-標準差呈現。 The IFN-γ enzyme linked immunospot assay (ELISPOT) (BD Biosciences) was used as described previously (Tomita Y, et al. Cancer Sci 2011; 102: 697-705) to evaluate Th cells for irradiated APC pulsed with peptides Immune response. Briefly, every 4 × 10 4 bulk CD4 + T cells were analyzed when stimulated with irradiated PBMC (3 × 10 4 cells / well) with peptide pulses, or every 1 × 10 4 bulk CD4 + The frequency of peptide-specific CD4 + T cells producing IFN-γ when stimulated with L cells (5 × 10 4 / well) with peptides pulsed by HLA-DP or HLA-DR-. In order to determine the restriction of antigen participation by HLA molecules, anti-HLA-AR monoclonal antibody (mAb) (L243, BioLegend), anti-HLA-DP mAb (B7 / 21, Abcam), anti-human HLA-DQ mAb (SPV-L3, Abcam) or anti-HLA class I mAb (W6 / 32, Abcam) to investigate the barriers to antigen-induced IFN-γ production. All mAbs were used at a final concentration of 5 micro-g / mL. All assessments of the IFN-γ ELISPOT analysis were performed in triplicate or duplication, and the results are presented as mean +/- standard deviation.

評估UC病患中MPHOSPH1-LP專一性CD4+ T細胞反應。在37℃以最終體積為2ml之添加5%未經補充之(decomplemented)人類血漿之AIM-V培養液(Invitrogen)中,在MPHOSPH1-LP(20micro-g/mL)的混合物的存在下,在37℃培養取自五名UC病患的PBMC(2 X 106/井,24井盤)。在第0和2天添加IL-2(20U/ml)和IL-7(5ng/ml)。在細胞培養七天之後,收集、清洗並將細胞與單獨的MPHOSPH1-LP或做為對照的LP移至ELISPOT盤中(5-10 X 104/井)18小時。如前所述,計數MPHOSPH1-LP-專一性CD4+T細胞的數量。 Assess MPHOSPH1-LP specific CD4 + T cell response in UC patients. At 37 ° C. in a final volume of 2 ml of AIM-V culture medium (Invitrogen) supplemented with 5% decomplemented human plasma in the presence of a mixture of MPHOSPH1-LP (20 micro-g / mL) in PBMCs (2 × 10 6 / well, 24-well plate) taken from five UC patients were cultured at 37 ° C. IL-2 (20 U / ml) and IL-7 (5 ng / ml) were added on days 0 and 2. After seven days the cell culture was collected, and the cells washed with MPHOSPH1-LP alone as a control or LP moved ELISPOT plate (5-10 X 10 4 / well) for 18 hours. As before, the number of MPHOSPH1-LP-specific CD4 + T cells was counted.

體內交叉起動分析 In vivo cross-start analysis

F.A.Lemonnier博士(Firat H,et al.Eur J Immunol 1999;29:3112-21;Jung Ko,et al.,J Virol 2012;86:7616-24)好心地提供HLA-A2和HLA-A24(HHD)基因轉殖小鼠(transgenic mouse,Tgm)。在尾巴根部以乳化於不完全弗氏佐劑(Freund’s adjuvant,IFA)中的MPHOSPH1-LP1溶液(100micro-g/小鼠),以七天為間隔,皮內(intradermally)注射小鼠。在以MPHOSPH1-LP1的第二次免疫疫苗的七天後,藉由磁性微珠(Miltenyi Biotec,Aubum,CA,USA)自鼠蹊部淋巴結以陽性篩選(positive selection)單離CD8+T細胞。透過生物體外(ex vivo)ELISPOT分析(Harao M,et al.,Int J Cancer 2008;123:2616-25;Inoue M,et al.,Immunol Lett 2009;126: 67-72),計算以經過MPHOSPH1-A2282-291或MPHOSPH1-A24278-286SP-脈衝之自骨髓衍生的DC(BM-DC,2 X 104/井)刺激時,產生IFN-γ之CD8+T細胞(1 X 105/井)的數量。 Dr. FALemonnier (Firat H, et al. Eur J Immunol 1999; 29: 3112-21; Jung Ko, et al., J Virol 2012; 86: 7616-24) kindly provided HLA-A2 and HLA-A24 (HHD) Transgenic mouse (Tgm). Mice were injected intradermally at the root of the tail with a solution of MPHOSPH1-LP1 (100 micro-g / mouse) emulsified in Freund's adjuvant (IFA) at intervals of seven days. Seven days after the second immunization with MPHOSPH1-LP1, CD8 + T cells were isolated from the mucosa lymph nodes by positive selection using magnetic microbeads (Miltenyi Biotec, Autum, CA, USA). By ex vivo ELISPOT analysis (Harao M, et al., Int J Cancer 2008; 123: 2616-25; Inoue M, et al., Immunol Lett 2009; 126: 67-72), calculated to pass MPHOSPH1 -A2 282-291 MPHOSPH1-A24 278-286 or derived from bone marrow DC (BM-DC, 2 X 10 4 / well) of the SP- pulse stimulation, the IFN-γ produced CD8 + T cells (1 X 10 5 / Well).

細胞激素分析 Cytokine analysis

MPHOSPH1-LP-專一性散裝Th細胞或Th選殖體(1 X 104/井)與經過同源胜肽脈衝之自體PBMC(3 X 104/井)一起培養於96井盤中。使用Bio-Plex系統(Bio-Rad),如先前所報導,根據廠商說明書,量測24小時後的培養物上清液中的細胞激素水平。 MPHOSPH1-LP- bulk specific Th or Th cells cloned body (1 X 10 4 / well) and cultured in a 96-well plate with autologous peptide through pulses PBMC (3 X 10 4 / well). Using the Bio-Plex system (Bio-Rad), as previously reported, the cytokine levels in the culture supernatant after 24 hours were measured according to the manufacturer's instructions.

TCR定序 TCR sequencing

使用RNeasy mini套組(Qiagen,Valencia,CA,USA),自MPHOSPH1-LP1-專一性T細胞單離總RNA。使用先所述的計畫(protocol)(Fang H,et al.,Oncoimmunology.2014;3:12:e968467;Choudhury NJ,et al.,European urology focus.2016;2:4:445-52),經過一些修改,準備TRAV和TRBV的定序庫(sequencing library),並且使用600次循環的Miseq Reagent套組V3(Illumina,Inc.,San Diego,CA,USA),在IlluminaMiseq平台進行定序。然後,以先前所述的演算法(Fang H,et al.,Oncoimmunology.2014;3:12:e968467),分析序列讀值。為了辨別個別TRAV和TRBV定序讀值中的V-(D)-J片段(V-(D)-J segment),使Bowtie2對準器(Bowtie2 aligner)(版本2.1.0)(Langmead B,et al.,Nature methods.2012;9(4):357-9;Lefranc MP,et al.,Nucleic acids research 2005;33(Database issue):D593-7),FASTQ檔案中的每個序列讀值對應到(mapped to)衍生自IMGT/GENE-DB(Giudicelli V,et al.,Nucleic acids research.2005;33(Database issue):D256-61)的參考序列。為了界定出在TRAV和TRBV中的互補性決定區3(complementarity determining region 3,CDR3)的胺基酸序列,辨別出由編碼於V片段的3’部的保守性半胱胺酸(cysteine)和編碼於J片段的5’部的保守性苯丙胺酸(phenylalanine)所形成的CDR3的邊界 (Fang H,et al.,Oncoimmunology.2014;3(12);e968467)。萃取出在保守性半胱胺酸和苯丙胺酸兩者之間的核苷酸序列,以確認CDR3區域的胺基酸序列。 Total RNA was isolated from MPHOSPH1-LP1-specific T cells using the RNeasy mini kit (Qiagen, Valencia, CA, USA). Using the protocol described earlier (Fang H, et al., Oncoimmunology. 2014; 3: 12: e968467; Choudhury NJ, et al., European urology focus. 2016; 2: 4: 445-52), After some modifications, a sequencing library for TRAV and TRBV was prepared, and 600 cycles of the Miseq Reagent Kit V3 (Illumina, Inc., San Diego, CA, USA) were used for sequencing on the IlluminaMiseq platform. Then, using the previously described algorithm (Fang H, et al., Oncoimmunology. 2014; 3: 12: e968467), the sequence reads were analyzed. In order to identify the V- (D) -J segment (V- (D) -J segment) in individual TRAV and TRBV sequence reads, Bowtie2 aligner (version 2.1.0) (Langmead B, et al., Nature methods. 2012; 9 (4): 357-9; Lefranc MP, et al., Nucleic acids research 2005; 33 (Database issue): D593-7), each sequence read in the FASTQ file A mapped sequence derived from IMGT / GENE-DB (Giudicelli V, et al., Nucleic acids research. 2005; 33 (Database issue): D256-61). In order to define the amino acid sequence of complementarity determining region 3 (CDR3) in TRAV and TRBV, it was identified that the conserved cysteine and The border of CDR3 formed by the conserved phenylalanine at the 5 'portion of the J fragment (Fang H, et al., Oncoimmunology. 2014; 3 (12); e968467). The nucleotide sequence between the conservative cysteine and phenylalanine was extracted to confirm the amino acid sequence of the CDR3 region.

TCR選殖和在TG40中的表現 TCR breeding and performance in TG40

如先前所述(Hamana H,et al.,Biochemical and Biophysical research communications.2016;474(4):709-14),使用一步多工RT-PCR(one-step multiplex RT-PCR)從T細胞株放大TCR cDNA。藉由直接定序,確認放大的PCR產物的DNA序列。為了分析取得的TCR cDNA的抗原專一性,如先前所述(Mou Z,et al.,Science translational medicine.2015;7(310):310ra167;Kobayashi E,et al.,Nature medicine.2013;19(11):1542-6),建立TCR的表現載體,然後轉移至Plat-E Cell(由東京大學,Toshio Kitamura教授慷慨地提供),以產生重組的反轉錄病毒(retrovirus)。如先前所述(Kobayashi E,et al.,Nature medicine.2013;19(11):1542-6),將產生的TCR轉移至TG40細胞(Ohno H,et al.,Journal of immunology(Baltimore,Md:1950)1991;146(11):3742-6)。在10micro-g/mL的抗原胜肽的存在下,1 X 105個TCR-轉移的TG40細胞與1 X 105個限制HLA-DR表現的L細胞於37℃、5% CO2的氣氛中共同培養,且以流式細胞儀分析細胞表面上CD69和CD137的表現。 As described previously (Hamana H, et al., Biochemical and Biophysical research communications. 2016; 474 (4): 709-14), one-step multiplex RT-PCR was used from T cell lines Amplify the TCR cDNA. The DNA sequence of the amplified PCR product was confirmed by direct sequencing. In order to analyze the antigen specificity of the obtained TCR cDNA, as described previously (Mou Z, et al., Science translational medicine. 2015; 7 (310): 310ra167; Kobayashi E, et al., Nature medicine. 2013; 19 ( 11): 1542-6), establish a TCR expression vector, and transfer it to Plat-E Cell (generally provided by Professor Toshio Kitamura, University of Tokyo) to generate a recombinant retrovirus. The produced TCR was transferred to TG40 cells (Ohno H, et al., Journal of immunology (Baltimore, Md) as previously described (Kobayashi E, et al., Nature medicine. 2013; 19 (11): 1542-6). : 1950) 1991; 146 (11): 3742-6). In the presence of 10 micro-g / mL of the antigen peptide, 1 X 10 5 TCR-transferred TG40 cells and 1 X 105 5 HLA-DR-restricted L cells in an atmosphere of 37 ° C and 5% CO 2 Co-culture, and the expression of CD69 and CD137 on the cell surface was analyzed by flow cytometry.

統計分析 Statistical Analysis

本案使用雙尾學生t(Student t)檢定(條狀圖)或無參數曼-惠特尼(Mann-Whitney)U檢定(散點圖)比較數據。在所有測試中,P值差異小於0.05被認為是統計上顯著。 This case uses a two-tailed Student t test (bar graph) or a parameterless Mann-Whitney U test (scatter plot) to compare data. In all tests, differences in P-values less than 0.05 were considered statistically significant.

結果 The result

含有有潛力之混雜的HLA第II類結合MPHOSPH1長胜肽之CTL-抗原決定位的預測及選擇 Prediction and selection of CTL-epitope containing potential hybrid HLA class II binding MPHOSPH1 long peptide

為了鑑別MPHOSPH1之有潛力之混雜的HLA-第II類結合之Th細胞抗原決定 位,首先使用最近發展的電腦演算法檢驗MPHOSPH1的胺基酸序列(第1A圖、C及表1)(Wang P,et al.BMC Bioinformatics 2010;11:568;Wang P,et al.,PLoS Comput Biol 2008;4:e1000048)。一胜肽MPHOSPH1272-298-LP(MPHOSPH1-LP1)接近CTL-抗原決定位序列,其由經HLA-A2及A24限制之CTL所辨識,而另一胜肽MPHOSPH1326-351-LP(MPHOSPH1-LP2)不包含已知的CTL-抗原決定位序列(第1B圖)。因此,本案發明人合成2個候選LP,MPHOSPH1-LP1及MPHOSPH1-LP2,預測對在日本族群中頻繁的HLA第II類分子(HLA-DR4、HLA-DR9、HLA-DR15、HLA-DP2和HLA-DP5)具有強結合親和力,且其中一者包含用於後續分析的9或10員的胜肽,其由經HLA-A2或A24限制之CTLs所辨識。 In order to identify the potential hybrid HLA-type II binding Th cell epitope of MPHOSPH1, the amino acid sequence of MPHOSPH1 was first tested using a recently developed computer algorithm (Figure 1A, C and Table 1) (Wang P , et al. BMC Bioinformatics 2010; 11: 568; Wang P, et al., PLoS Comput Biol 2008; 4: e1000048). One peptide, MPHOSPH1 272-298- LP (MPHOSPH1-LP1), is close to the CTL- epitope sequence, which is recognized by CTLs restricted by HLA-A2 and A24, while the other peptide, MPHOSPH1 326-351 -LP (MPHOSPH1- LP2) does not contain the known CTL-epitope sequence (Figure 1B). Therefore, the inventors of the present case synthesized two candidate LPs, MPHOSPH1-LP1 and MPHOSPH1-LP2, and predicted that HLA class II molecules (HLA-DR4, HLA-DR9, HLA-DR15, HLA-DP2, and HLA) that are frequent in Japanese population -DP5) has strong binding affinity, and one of them contains a 9- or 10-membered peptide for subsequent analysis, which is identified by HLA-A2 or A24-restricted CTLs.

辨識混雜的MPHOSPH1衍生Th細胞抗原決定位 Identification of hybrid MPHOSPH1-derived Th cell epitopes

將從健康捐贈者之PBMC單離的CD4+ T細胞以週的間隔以經MPHOSPH1-LP1或-LP2脈衝的自體DC與經輻射之PBMC刺激。在至少3回合刺激後,藉由IFN-γ ELISPOT分析檢驗培養之CD4+ T細胞的MPHOSPH1-LP專一性反應。在HLA-DR4及DR9陽性之健康捐贈者(HD1)中,產生的Th細胞以依存HLA-DR的方式產生顯著量的IFN-γ回應於經MPHOSPH1-LP1脈衝的PBMC。散裝Th細胞以依存HLA-DR的方式專一性地辨認經由MPHOSPH1-LP1脈衝之L-DR9細胞,而不是未經脈衝之L-DR9細胞、經MPHOSPH1-LP1-脈衝之L-DR4細胞或L-DR53細胞(第2A圖)。這些結果指出,藉由HLA-DR9呈現MPHOSPH1-LP1。為了探討MPHOSPH1-LP1是否會誘導由其他HLA第II類分子限制之Th細胞的反應,測試來自其它健康捐贈者的CD4+T細胞(HD3及HD4)。本案發明人證實MPHOSPH1-LP1產生HLA-DP5(DPB1*05:01)-限制Th細胞和HLA-DR4(DRB1*04:05)-限制散裝Th細胞(第2B及2C圖)。 CD4 + T cells isolated from PBMCs from healthy donors were stimulated at weekly intervals with autologous DC pulsed with MPHOSPH1-LP1 or -LP2 and radiated PBMC. After at least 3 rounds of stimulation, the MPHOSPH1-LP specific response of the cultured CD4 + T cells was examined by IFN-γ ELISPOT analysis. In HLA-DR4 and DR9 positive healthy donors (HD1), the Th cells produced produced a significant amount of IFN-γ in a HLA-DR-dependent manner in response to MPHOSPH1-LP1 pulsed PBMC. Bulk Th cells specifically identify L-DR9 cells pulsed by MPHOSPH1-LP1 in a HLA-DR-dependent manner, rather than L-DR9 cells unpulsed, L-DR4 cells pulsed by MPHOSPH1-LP1-, or L-DR9. DR53 cells (Figure 2A). These results indicate that MPHOSPH1-LP1 is presented by HLA-DR9. To investigate whether MPHOSPH1-LP1 induces the response of Th cells restricted by other HLA class II molecules, CD4 + T cells (HD3 and HD4) from other healthy donors were tested. The present inventors confirmed that MPHOSPH1-LP1 produces HLA-DP5 (DPB1 * 05: 01) -restricted Th cells and HLA-DR4 (DRB1 * 04: 05) -restricted bulk Th cells (Figures 2B and 2C).

在HLA-DR4、DR9和DR53-陽性之健康捐贈者(HD1)中,藉由以MPHOSPH1-JP2刺激PBMC所產生的Th細胞以依存HLA-DR的方式產生顯著量 的IFN-γ回應於經MPHOSPH1-LP2脈衝的PBMC。散裝Th細胞以依存HLA-DR的方式,專一性地辨認經MPHOSPH1-LP2脈衝之L-DR4細胞,而不是未經脈衝之L-DR4細胞、經MPHOSPH1-LP2脈衝之L-DR9細胞或L-DR53細胞(第2D圖)。這些結果指出,MPHOSPH1-LP2由HLA-DR4呈現。為了探討MPHOSPH1-LP2是否會誘導由其他HLA第II類分子限制之Th細胞的反應,測試來自其它健康捐贈者(HD2及HD4)的CD4+T細胞。本案發明人證實,以MPHOSPH1-LP2刺激會產生HLA-DP2(DPB1*02:01)-限制之Th細胞及HLA-DR4(DRB1*04:05)限制之散裝Th細胞(第2E及2F圖)。因此,MPHOSPH1-LP2結合至HLA-DP2及HLA-DR4,其暗示MPHOSPH1-LP2亦為由在日本族群中常見的HLA第II類分子所呈現之混雜的Th細胞抗原決定位(Saito S,et al.,Tissue Antigens 2000;56:522-9;Mack SJ,et al.,Tissue Antigens 2000;55:383-400)。這些結果顯示,這兩個MPHOSPH1-LP為混雜的Th細胞抗原決定位,如表3所概述。由於這些LP為由在日本族群中常見的HLA第II類所呈現之混雜的Th細胞抗原決定位(表4)(Zarour HM,et al.,Cancer research.2002;62(1):213-8;Grabowska AK,et al.,International journal of cancer.2015;136(1):212-24),所以在許多日本捐贈者的PBMC中,這些胜肽的組合會誘導MPHOSPH1專一性Th細胞反應。 In HLA-DR4, DR9, and DR53-positive healthy donors (HD1), Th cells produced by stimulating PBMCs with MPHOSPH1-JP2 produced a significant amount of IFN-γ in a HLA-DR-dependent manner in response to MPHOSPH1 -LP2 pulsed PBMC. The Th cells in bulk specifically identify the L-DR4 cells pulsed by MPHOSPH1-LP2 in a HLA-DR-dependent manner, not the unpulsed L-DR4 cells, MP-HOSPH1-LP2 pulsed L-DR9 cells, or L- DR53 cells (Figure 2D). These results indicate that MPHOSPH1-LP2 is presented by HLA-DR4. To investigate whether MPHOSPH1-LP2 induces the response of Th cells restricted by other HLA class II molecules, CD4 + T cells from other healthy donors (HD2 and HD4) were tested. The inventors confirmed that stimulation with MPHOSPH1-LP2 will produce HLA-DP2 (DPB1 * 02: 01) -restricted Th cells and HLA-DR4 (DRB1 * 04: 05) -restricted bulk Th cells (Figures 2E and 2F) . Therefore, MPHOSPH1-LP2 binds to HLA-DP2 and HLA-DR4, which implies that MPHOSPH1-LP2 is also a hybrid Th-cell epitope presented by HLA class II molecules common in the Japanese population (Saito S, et al ., Tissue Antigens 2000; 56: 522-9; Mack SJ, et al., Tissue Antigens 2000; 55: 383-400). These results show that these two MPHOSPH1-LPs are promiscuous Th cell epitopes, as summarized in Table 3. Since these LPs are promiscuous Th cell epitopes presented by HLA class II common in Japanese populations (Table 4) (Zarour HM, et al., Cancer research. 2002; 62 (1): 213-8 Grabowska AK, et al., International journal of cancer. 2015; 136 (1): 212-24), so in many PBMCs of Japanese donors, the combination of these peptides induces MPHOSPH1-specific Th cell response.

MPHOSPH1-LP的彙整及Th細胞對五位HD中的MPHOSPH1-LP免疫反應。 The aggregation of MPHOSPH1-LP and the immune response of Th cells to MPHOSPH1-LP in five HDs.

a劃底線的HLA第II類對偶基因編碼在HD中呈現MPHOSPH1-LP至Th細胞的HLA第II類分子;捐贈者的HLA對偶基因的細節顯示於表2中。 a The underlined HLA class II dual genes encode HLA class II molecules that present MPHOSPH1-LP to Th cells in HD; details of donor HLA dual genes are shown in Table 2.

b劃底線且斜粗體的序列為CTL抗原決定位;以由演算法預測高親和力結合至HLA第II類分子,挑選MPHOSPH1-LP2序列;以HLA第II類結合至且靠近已知的CTL抗原決定位兩者,挑選MPHOSPH1-LP1。a.a.:胺基酸,陰性:無法取得陽性數據且未進一步繼續,LP:長胜肽,HD:健康捐贈者 b The underlined and italicized sequence is the CTL epitope; the algorithm is used to predict the high affinity binding to HLA class II molecules, and the MPHOSPH1-LP2 sequence is selected; the HLA class II is bound to and is close to the known CTL antigen Decide on both and pick MPHOSPH1-LP1. aa: Amino acid, Negative: No positive data could be obtained without further progress, LP: Long peptide, HD: Healthy donor

於日本族群中的每個HLA對偶基因的抗原頻率是引用自先前的報導(Kobayashi,et al.,Can res 2001;61(12):4773-8) The antigenic frequency of each HLA dual gene in the Japanese population is quoted from a previous report (Kobayashi, et al., Can res 2001; 61 (12): 4773-8)

MPHOSPH1-LP2經天然處理且由DC呈現 MPHOSPH1-LP2 is naturally processed and presented by DC

評估DC是否攝入並處理MPHOSPH1蛋白質以刺激MPHOSPH1-LP專一性Th選殖。製備載有重組MPHOSPH1蛋白質之DC,並在IFN-γELISPOT分析法中作為APC(Nishiu M,et al.,Jpn J Cancer Res.2002 Aug;93(8):894-901;Harao M,et al.,Int J Cancer 2008;123:2616-25)。HLA-DR4限制之MPHOSPH1-LP2反應性Th選殖有效地辨認載有MPHOSPH1蛋白質之DC,但不辨認載有對照蛋白質之DC,顯示此抗原決定位係從MPHOSPH1蛋白質經天然處理且由HLA-DR4分子呈 現(第3圖)。這些結果顯示,MPHOSPH1-LP2係從MPHOSPH1蛋白質經天然處理且係由DC呈現。 Assess whether DCs ingest and process MPHOSPH1 protein to stimulate MPHOSPH1-LP specific Th colonies. DCs carrying recombinant MPHOSPH1 protein were prepared and used as APC in the IFN-γELISPOT analysis (Nishiu M, et al., Jpn J Cancer Res. 2002 Aug; 93 (8): 894-901; Harao M, et al. Int J Cancer 2008; 123: 2616-25). HLA-DR4-restricted MPHOSPH1-LP2 reactive Th colonies effectively identified DCs carrying the MPHOSPH1 protein, but did not identify DCs carrying the control protein, showing that this epitope was derived from MPHOSPH1 protein by natural processing and by HLA-DR4 Molecular presentation (Figure 3). These results show that the MPHOSPH1-LP2 line is naturally processed from the MPHOSPH1 protein and is presented by DC.

經MPHOSPH1-LP誘導之Th細胞產生Th1細胞激素 Th1 cytokines produced by Th cells induced by MPHOSPH1-LP

為了對MPHOSPH1-LP專一性Th細胞定性,本案發明人測量由Th細胞分泌的各種細胞激素,其對以經由各自的同源胜肽脈衝之自體PBMC刺激回應。在以同源胜肽再刺激之後,相對大量的Th1細胞激素,例如IFN-γ、TNF-α、IL-2和GM-CSF,但不是IL-4或IL-17,由MPHOSPH1-LP專一性Th細胞所產生(第5圖),顯示MPHOSPH1-LP具有誘導Th1-極化之Th細胞的能力。因此,Th細胞之經由MPHOSPH1-LP的誘導對於抗腫瘤治療是有用的。 In order to characterize MPHOSPH1-LP-specific Th cells, the inventors measured various cytokines secreted by Th cells, which responded to stimulation of autologous PBMCs pulsed by their respective homologous peptides. After restimulation with homologous peptides, a relatively large amount of Th1 cytokines, such as IFN-γ, TNF-α, IL-2, and GM-CSF, but not IL-4 or IL-17, are specific to MPHOSPH1-LP Th cell production (Figure 5) shows that MPHOSPH1-LP has the ability to induce Th1-polarized Th cells. Therefore, the induction of Th cells via MPHOSPH1-LP is useful for antitumor therapy.

MPHOSPH1-LP1專一性散裝Th細胞表現收斂的(converged)TCR-α和-β基因 MPHOSPH1-LP1 specific bulk Th cells show converged TCR-α and -β genes

使用次世代定序儀,藉由TCR-α和-β基因的深cDNA定序,分析MPHOSPH1-LP1專一性T細胞庫。在散裝Th細胞的多次刺激之後,在散裝Th細胞兩者中一對特定的TCR-α和-β基因使用的頻率增加。由親本散裝T細胞株建立的兩個LP專一性T細胞選殖,其已經以胜肽刺激四或五次,表現和散裝Th細胞相同的一對TCR-α和-β基因(第6A和6B圖)。單離自MPHOSPH1-LP1專一性T細胞選殖的TCR-α和-β基因分別導入小鼠TCR陰性T細胞株TG40,成功地獲得原始的抗原胜肽專一性和親本Th細胞的HLA-限制,如由流式細胞術的分析偵測到的CD69和CD137的上調所示(第6C圖)。這些觀察證實所建立的T細胞的選殖和這些TCR-α和-β鏈對的專一性。 The next generation sequencer was used to analyze the MPHOSPH1-LP1 specific T cell bank by deep cDNA sequencing of the TCR-α and -β genes. After multiple stimulation of bulk Th cells, the frequency of use of a particular pair of TCR-α and -β genes increased in both bulk Th cells. Two LP-specific T cell colonies established from parental bulk T cell strains have been stimulated four or five times with peptides, showing the same pair of TCR-α and -β genes as bulk Th cells (6A and Figure 6B). TCR-α and -β genes isolated from MPHOSPH1-LP1 specific T cells isolated were introduced into mouse TCR-negative T cell line TG40, respectively, and the original antigenic peptide specificity and HLA-restriction of parental Th cells were successfully obtained. As shown by the upregulation of CD69 and CD137 detected by flow cytometry analysis (Figure 6C). These observations confirm the colonization of established T cells and the specificity of these TCR-α and -β chain pairs.

MPHOSPH1-LP的交叉呈現(cross-presentation)有效地於體內(in vivo)啟動MPHOSPH1-SP專一性CD8+T細胞 Cross-presentation of MPHOSPH1-LP effectively activates MPHOSPH1-SP-specific CD8 + T cells in vivo

藉由生物體外IFN-γ ELISPOT分析,檢驗MPHOSPH1-LP1之MPHOSPH1-A2282-291專一性CTL和MPHOSPH1-A24278-226專一性CTL的啟動能 力。以乳化於IFA中的MPHOSPH1-LP1對HLA-A2和HLA-A24 Tgm進行免疫兩次。單離自經接種MPHOSPH1-LP1疫苗之HLA-A2和HLA-A24 Tgm的CD8+T細胞專一性地產生IFN-γ,作為對以經MPHOSPH1-A2282-291SP或MPHOSPH1-A24278-286SP脈衝之BM-DC進行刺激的回應(第4A和4B圖)。這些結果暗示,在攝入MPHOSPH1-LP1之後,在HLA-A2和HLA-A24 Tgm中,APC可於體內交叉啟動MPHOSPH1-A2282-291SP專一性CTL和MPHOSPH1-A24278-286專一性CTL。 The in vitro IFN-γ ELISPOT analysis was used to examine the initiation ability of MPHOSPH1-A2 282-291 specific CTL and MPHOSPH1-A24 278-226 specific CTL for MPHOSPH1-LP1. HLA-A2 and HLA-A24 Tgm were immunized twice with MPHOSPH1-LP1 emulsified in IFA. Isolated from the inoculated MPHOSPH1-LP1 vaccines HLA-A2 and HLA-A24 Tgm of specific CD8 + T cells produced IFN-γ, as to by MPHOSPH1-A2 282-291 SP or MPHOSPH1-A24 278-286 SP The pulsed BM-DC responds to the stimulus (Figures 4A and 4B). These results suggest that, after ingestion MPHOSPH1-LP1, the HLA-A2 and HLA-A24 Tgm in, the APC in vivo cross-priming can MPHOSPH1-A2 282-291 SP-specific CTL and MPHOSPH1-A24 278-286 specific CTL.

單離自UC病患的PBMC辨認一些MPHOSPH1-LP PBMCs isolated from UC patients identify some MPHOSPH1-LP

為了檢驗於UC病患中MPHOSPH1-LP專一性Th細胞反應的誘導,本案發明人在體外(in vitro)以LP刺激單離自後期UC病患的PBMC。病患特性顯示於表5。在刺激之後,量測個別的MPHOSPH1-LP專一性T細胞的頻率。MPHOSPH1-LP1及MPHOSPH1-LP2誘導來自五名病患的胜肽專一性T細胞。由T細胞之胜肽專一性的IFN-γ產生顯著地受抗HLA-DR mAb抑制,但不受抗HLA-DP mAb或抗HLA第I類mAb抑制(第7圖)。這些結果顯示,IFN-γ係由MPHOSPH1-LP專一性及HLA-DR限制之CD4+T細胞所產生,暗示MPHOSPH1-LP1及MPHOSPH1-LP2不僅誘導來自HD的抗原專一性Th細胞,還誘導來自UC病患的抗原專一性Th細胞。 In order to test the induction of MPHOSPH1-LP-specific Th cell response in UC patients, the inventors of the present case stimulated PBMC isolated from late stage UC patients with LP in vitro. Patient characteristics are shown in Table 5. After stimulation, the frequency of individual MPHOSPH1-LP specific T cells was measured. MPHOSPH1-LP1 and MPHOSPH1-LP2 induced peptide-specific T cells from five patients. T-cell peptide-specific IFN-γ production was significantly inhibited by anti-HLA-DR mAb, but not by anti-HLA-DP mAb or anti-HLA class I mAb (Figure 7). These results indicate that IFN-γ is produced by MPHOSPH1-LP-specific and HLA-DR-restricted CD4 + T cells, suggesting that MPHOSPH1-LP1 and MPHOSPH1-LP2 not only induce antigen-specific Th cells from HD, but also from UC The patient's antigen-specific Th cells.

a衍生自五位UC病患的PBMC的MPHOSPH1-LP專一性免疫反應的彙整。使用IFN-γ酵素連結免疫點分析法(enzyme-linked immunospot assay,ELISPOT)測量MPHOSPH1-LP專一性Th細胞的回應。簡言之,衍生自病患的PBMC經所示的 MPHOSPH1-LP所刺激。當IFN-γ點(spot)的平均數量超過25且大於背景訊號兩倍以上時,則反應被記錄為陽性。 a Pooling of MPHOSPH1-LP-specific immune responses derived from PBMCs from five UC patients. The response of MPHOSPH1-LP-specific Th cells was measured using an IFN-γ enzyme-linked immunospot assay (ELISPOT). Briefly, patient-derived PBMCs were stimulated by MPHOSPH1-LP as shown. When the average number of IFN-γ spots exceeds 25 and is more than twice the background signal, the response is recorded as positive.

討論 Discuss

在膀胱內接種BCG和MPHOSPH1-衍生SP疫苗的結合免疫療法臨床試驗第I/II期顯示,對於預防非肌肉入侵的膀胱癌的復發及誘導CTL的安全性和良好免疫原性具有大有可為的臨床效果(Obara W,et al.,Clin Oncol 2012;42:591-600)。因此,本案發明人嘗試鑑別誘導抗原專一性Th1細胞和CTL的LP,以進一步發展出更好的胜肽疫曲免疫療法。 Phase I / II clinical trials of combined immunotherapy with BCG and MPHOSPH1-derived SP vaccine in the bladder have shown promising safety and good immunogenicity in preventing the recurrence of non-muscle invasive bladder cancer and inducing CTL. (Obara W, et al., Clin Oncol 2012; 42: 591-600). Therefore, the inventors of the present case have tried to identify LPs that induce antigen-specific Th1 cells and CTLs to further develop better peptide-ephemeral immunotherapy.

本案發明人鑑別出兩種混雜的MPHOSPH1-衍生的Th細胞抗原決定位胜肽,如表3所彙整。其中一種包含HLA-A2及A24限制之CTL抗原決定位。本案發明人證實,MPHOSPH1-LP2係從MPHOSPH1蛋白質經天然處理且在HLA第II類分子的背景下,於DC的細胞表面上呈現(第3圖)。暗示由這兩種MPHOSPH1-LP誘導之CD4+T細胞對癌症免疫療法具有有益的特性。 The inventors of the present case identified two hybrid MPHOSPH1-derived Th cell epitope peptides, as summarized in Table 3. One of them contains HLA-A2 and A24 restricted CTL epitopes. The inventors of the present case confirmed that MPHOSPH1-LP2 was naturally processed from MPHOSPH1 protein and presented on the cell surface of DCs in the context of HLA class II molecules (Figure 3). It is suggested that CD4 + T cells induced by these two MPHOSPH1-LPs have beneficial properties for cancer immunotherapy.

由於MHC第II類分子為高度多型性(polymorphic),為了在臨床上將活化HLA第II類限制之Th細胞的LP應用於癌症疫苗療法,應考慮的是,胜肽能結合至多個HLA第II類分子且具有更廣範圍的適應性(Kobayashi H,et al.,Cancer research.2001;61(12):4773-8;Zarour HM,et al.,Cancer research.2002;62(1):213-8;Grabowska AK,et al.,International journal of cancer.2015;136(1):212-24)。本案發明人已在本文展示,MPHOSPH1-LP係經由HLA-DR4、HLA-DR9、HLA-DR15、HLA-DR53、HLA-DP2及HLA-DP5所呈現,這暗示用MPHOSPH1-LP的結合之免疫疫苗可涵蓋大多數的日本族群(表4)。事實上,本案發明人觀察到MPHOSPH1-LP專一性Th細胞存在於五位UC病患中,這暗示在許多的這些病患中,MPHOSPH1-LP是廣泛地有用,且應進一步探討使用更多具有各種HLA第II類的癌症病患的研究。 Since MHC class II molecules are highly polymorphic, in order to clinically apply LPs that activate HLA class II-restricted Th cells to cancer vaccine therapy, it should be considered that peptides can bind to multiple HLA class Class II molecules and a wider range of adaptability (Kobayashi H, et al., Cancer research. 2001; 61 (12): 4473-8; Zarou HM, et al., Cancer research. 2002; 62 (1): 213-8; Grabowska AK, et al., International journal of cancer. 2015; 136 (1): 212-24). The inventors of the present case have shown here that MPHOSPH1-LP is presented via HLA-DR4, HLA-DR9, HLA-DR15, HLA-DR53, HLA-DP2, and HLA-DP5, which implies that a combined vaccine with MPHOSPH1-LP Can cover most Japanese ethnic groups (Table 4). In fact, the inventors observed that MPHOSPH1-LP-specific Th cells are present in five UC patients, which suggests that MPHOSPH1-LP is widely useful in many of these patients, and the use of more Studies of various HLA Class II cancer patients.

MPHOSPH1-LP誘導HLA-DP2、DP5、DR4和DR9限制之Th細胞(第2圖和表3)。在日本和太平洋/亞洲族群中,HLA-DP2、DP5、DR4和DR9對偶基因是頻繁的HLA第II類對偶基因,且HLA-A2和A24對偶基因也在那些族群中被觀察到(表4)。此外,在HLA-A2或A24 Tgm中,MPHOSPH1272-298-LP於體內誘導MPHOSPH1-A2282-291專一性CTL和MPHOSPH1-A24278-286專一性CTL的啟動和延伸,這暗示含有MPHOSPH1-SP抗原決定位的MPHOSPH1-LP可誘導MPHOSPH1專一性Th細胞和CTL。因此,本案發明人建議,這些免疫原性MPHOSPH1-LP可具有誘導更強抗腫瘤反應的潛力。 MPHOSPH1-LP induced HLA-DP2, DP5, DR4, and DR9-restricted Th cells (Figure 2 and Table 3). In the Japanese and Pacific / Asian populations, HLA-DP2, DP5, DR4, and DR9 dual genes are frequent HLA class II dual genes, and HLA-A2 and A24 dual genes are also observed in those groups (Table 4) . In addition, the HLA-A2 or A24 Tgm in, MPHOSPH1 272-298 -LP start and extending MPHOSPH1-A2 282-291 vivo induction of specific CTL and MPHOSPH1-A24 278-286 specific CTL, suggesting containing MPHOSPH1-SP Epitope MPHOSPH1-LP can induce MPHOSPH1-specific Th cells and CTLs. Therefore, the present inventors suggest that these immunogenic MPHOSPH1-LPs may have the potential to induce a stronger anti-tumor response.

最近的LP研究已顯示,因為LP的長期交叉呈現,在誘導抗腫瘤CTL免疫的方面,含有天然CTL抗原決定位的免疫疫苗優於那些由最小CTL抗原決定位構成的免疫疫苗(Melief CJ,et al.,E Nat Rev Cancer 2008;8:351-60;Bijker MS,et al.,Eur J Immunol 2008;38:1033-42;Chauvin JM,et al.,J Immunol 2012;188:2102-10)。在HLA-A2或A24 Tgm中,包含已知的CTL抗原決定位的MPHOSPH1-LP1於體內透過交叉呈現路徑誘導CTL抗原決定位專一性CTL(第4圖)。因此,這些胜肽的免疫疫苗可同時誘導在癌症病患中的MPHOSPH1-LP1專一性Th細胞和CTL。 Recent LP studies have shown that because of the long-term cross-presentation of LP, in terms of inducing anti-tumor CTL immunity, immunization vaccines containing natural CTL epitopes are superior to those consisting of minimal CTL epitopes (Melief CJ, et al., E Nat Rev Cancer 2008; 8: 351-60; Bijker MS, et al., Eur J Immunol 2008; 38: 1033-42; Chauvin JM, et al., J Immunol 2012; 188: 2102-10) . In HLA-A2 or A24 Tgm, MPHOSPH1-LP1 containing a known CTL epitope induces CTL epitope-specific CTLs in vivo through a cross-presentation pathway (Figure 4). Therefore, these peptide-based immunization vaccines can simultaneously induce MPHOSPH1-LP1 specific Th cells and CTLs in cancer patients.

MPHOSPH1-LP2有效地誘導那些LP專一性Th細胞反應(第2D至F圖)。然而,他們不含有已知的HLA第I類限制之CTL抗原決定位(第1B圖)。最近已有報導指出,稱為表位擴散(epitope spreading)的現象在有效的抗腫瘤免疫反應的誘導中是關鍵的(Inderberg-Suso EM,et al.,Oncoimmunology.2012;1(5):670-86;Corbiere V,et al.,Cancer research.2011;71(4):1253-62)。事實上,接受治療性癌症(最小CTL抗原決定位胜肽)免疫疫苗的病患表現臨床反應和長期的存活。在那些病患中,皆觀察到Th細胞和CTL對相同的蛋白質或許多不包含於免疫疫苗中之不相關的抗原的其他抗原決定位的反應。這是因為免疫疫苗誘導 對目標抗原專一的CTL,且由於損害腫瘤細胞,其它TAA被釋放出來,被APC攝入且呈現,以誘導其它TAA專一性T細胞反應。如果情況是這樣,無CTL抗原決定位之MPHOSPH1-LP2的免疫疫苗會誘導LP專一性Th1反應,以及其它抗腫瘤Th1和CTL反應。再者,如果抗原決定位分散以包含新抗原(neoantigen),其為衍生自由產生於癌細胞中的體(somatic)誤義突變(missense mutation)基因所編碼之異常(aberrant)胜肽,抗腫瘤T細胞反應會更有效率,因為那些新抗原為非自身的。事實上,最近的研究已顯示有很多對新抗原專一之T細胞,這暗示編碼抗原的基因具有突變且擴散之抗原決定位也可包含新抗原。使用新抗原的癌症抗原免疫疫苗療法已吸引了很多注意力(Kreiter S,et al.,Nature.2015;520(7549):692-6;Linnemann C,et al.,Nature medicine.2015;21(1):81-5)。除了表位擴散的誘導之外,誘導並活化盡可能多的TAA專一性T細胞為癌症免疫疫苗療法成功的關鍵,MPHOSPH1-LP和SP的免疫疫苗配方可為待探討的有前景的免疫疫苗配方。 MPHOSPH1-LP2 effectively induces those LP-specific Th cell responses (Figures 2D to F). However, they do not contain known HLA class I restricted CTL epitopes (Figure 1B). Recently, it has been reported that the phenomenon called epitope spreading is critical in the induction of effective anti-tumor immune responses (Inderberg-Suso EM, et al., Oncoimmunology. 2012; 1 (5): 670 -86; Corbiere V, et al., Cancer research. 2011; 71 (4): 1253-62). In fact, patients receiving a therapeutic cancer (minimum CTL epitope peptide) immunization vaccine show clinical response and long-term survival. In those patients, responses of Th cells and CTLs to the same protein or many other epitopes of unrelated antigens that are not included in the immune vaccine were observed. This is because the immune vaccine induces CTL specific to the target antigen, and due to damage to tumor cells, other TAAs are released, taken up and presented by APC, to induce other TAA-specific T cell responses. If this is the case, the immunized vaccine of MPHOSPH1-LP2 without CTL epitopes induces LP-specific Th1 responses, as well as other anti-tumor Th1 and CTL responses. Furthermore, if the epitopes are dispersed to include neoantigen, it is an aberrant peptide encoded by a somatic missense mutation gene that is freely produced in cancer cells, and is anti-tumor. T-cell responses are more efficient because those neoantigens are non-self. In fact, recent studies have shown that there are many T cells specific for neoantigens, suggesting that the genes encoding the antigens have mutations and that the epitopes that have spread can also include neoantigens. Cancer antigen immunovaccination therapy using neoantigens has attracted a lot of attention (Kreiter S, et al., Nature. 2015; 520 (7549): 692-6; Linnemann C, et al., Nature medicine. 2015; 21 ( 1): 81-5). In addition to the induction of epitope diffusion, inducing and activating as many TAA-specific T cells as possible is the key to the success of cancer immunovaccination therapy. The immune vaccine formulations of MPHOSPH1-LP and SP can be promising immune vaccine formulations to be explored .

當本案發明人打算將含有Th細胞抗原決定位之LP用於癌症免疫療法時,抗腫瘤Th1細胞是否能在病患的體內被誘導是一個主要問題。經報導,Th細胞的表現型不僅受到在不同階段的周圍細胞激素環境(milieu)的影響,還受到TCR和MHC胜肽複合體的親和力(affinity)/結合力(avidity)的影響(Constant S,et al.,The Journal of experimental medicine.1995;182(5):1591-6;Yamane H,et al.,The Journal of experimental medicine.2005;202(6):793-804;van Panhuys N,et al.,Immunity.2014;41(1):63-74;Hosken NA,et al.,The Journal of experimental medicine.1995;182(5):1579-84)。換句話說,在辨認高密度的誘導強烈的TCR媒介之訊號的胜肽-HLA第II類複合體中,CD4+T細胞有分化成Th1細胞的傾向,且在相反的情況中,Th細胞傾向分化成Th2細胞。從此研究中的健康捐贈者誘導的MPHOSPH1-LP專一性Th細胞皆為Th1型細胞,其主要產生IFN-γ、TNF-α、 GM-CSF和IL-2(第5圖)。因此,MPHOSPH1-LP可較佳地引發Th1型Th細胞分化,可能是因為較高結合至HLA第II類分子的親和力,其可產生高密度LP-HLA第II類複合體,以刺激耐久且潛在地強的TCR媒介之活化訊號。 When the inventors of this case intend to use LPs containing Th cell epitopes for cancer immunotherapy, whether anti-tumor Th1 cells can be induced in the patient's body is a major problem. It has been reported that the phenotype of Th cells is not only affected by the surrounding cytokine environment (milieu) at different stages, but also by the affinity / avidity of the TCR and MHC peptide complex (Constant S, et al., The Journal of experimental medicine. 1995; 182 (5): 1591-6; Yamane H, et al., The Journal of experimental medicine. 2005; 202 (6): 793-804; van Panhuys N, et al., Immunity. 2014; 41 (1): 63-74; Hosken NA, et al., The Journal of experimental medicine. 1995; 182 (5): 1579-84). In other words, in the peptide-HLA class II complex that recognizes high-density signals that induce strong TCR, CD4 + T cells have a tendency to differentiate into Th1 cells, and in the opposite case, Th cells have a tendency Differentiate into Th2 cells. The MPHOSPH1-LP-specific Th cells induced by healthy donors from this study were all Th1-type cells, which mainly produced IFN-γ, TNF-α, GM-CSF, and IL-2 (Figure 5). Therefore, MPHOSPH1-LP can better induce Th1 type Th cell differentiation, which may be due to higher affinity for binding to HLA class II molecules, which can produce high-density LP-HLA class II complexes to stimulate durable and potential Ground-strength TCR media activation signal.

相反於藉由免疫疫苗誘導各種TAA專一性Th細胞和CTL,直接將對TAA專一的經基因工程之T細胞導入癌症病患似乎是另一有效的抗腫瘤療法。在臨床試驗中,Rosenberg等人將經反轉錄病毒以NY-ESO-1反應性CTL的TCR基因轉導之自體T細胞導入具有轉移的滑膜細胞肉瘤(synovial cell sarcoma)和黑色素瘤的病患,其顯示客觀的臨床反應(Robbins PF,et al.,Clinical cancer research:an official journal of the American Association for Cancer Research.2015;21(5):1019-27)。在此研究中,MPHOSPH1-LP專一性Th細胞的TCR使用分別在重覆的刺激之後,極端地收斂至一種TCRA和TCRB基因的結合(第6A-B圖)。每一對TCR基因導入小鼠TCR陰性T細胞株TG40展現出原始T細胞對其同源配位基(ligand)的專一性(第6C圖),這暗示表現那些TCR基因的病患自體T細胞的轉移可為有效的療法。MPHOSPH1-LP專一性Th細胞的TCR庫之收斂至具有特定CDR序列似乎類似於最近Dash等人和Glanville等人的觀察,其中相較於未被選為結合至特定的抗原胜肽之隨機TCR庫,抗原專一性TCR共享在CDR中專一地富集的短序列區域(motif)(Dash P,et al.,Nature.2017;547(7661):89-93;Glanville J,et al.,Nature.2017;547(7661):94-8)。 Instead of inducing various TAA-specific Th cells and CTLs by immunizing vaccines, direct introduction of genetically engineered T cells specific to TAA into cancer patients seems to be another effective anti-tumor therapy. In a clinical trial, Rosenberg et al. Introduced autologous T cells transduced with the TCR gene of NY-ESO-1 reactive CTL via retrovirus into disease with metastatic synovial cell sarcoma and melanoma Disease, which shows an objective clinical response (Robbins PF, et al., Clinical cancer research: an official journal of the American Association for Cancer Research. 2015; 21 (5): 1019-27). In this study, TCR use of MPHOSPH1-LP-specific Th cells, after repeated stimulation, respectively, extremely converged to a combination of TCRA and TCRB genes (Figures 6A-B). Each pair of TCR genes introduced into the mouse TCR-negative T cell line TG40 exhibited the specificity of the original T cells to their homologous ligands (Figure 6C), suggesting that patients expressing those TCR genes had autologous T Cell metastasis can be an effective therapy. The convergence of the TCR library of MPHOSPH1-LP-specific Th cells to a specific CDR sequence seems similar to recent observations by Dash et al. And Glanville et al., Compared to a random TCR library that was not selected to bind to a specific antigen peptide Antigen-specific TCRs share short sequence regions (motif) that are specifically enriched in CDRs (Dash P, et al., Nature. 2017; 547 (7661): 89-93; Glanville J, et al., Nature. 2017; 547 (7661): 94-8).

總結來說,本案發明人鑑別出兩種免疫原性MPHOSPH1-LP,其可誘導Th細胞。其中一者包含HLA-A2限制和HLA-A24限制之CTL抗原決定位。結果暗示,MPHOSPH1-LP提供於傳遞MPHOSPH1專一性Th1細胞和CTL有用的工具。這些發現支持以MPHOSPH1胜肽為依據之用於許多種癌症(例如膀胱癌)的免疫療法的可能臨床試驗。此外,在LP專一性Th細胞上表現之收斂的TCR對於在體外(in vitro)和可能於體內監測LP專一性Th細胞可能是有用的。 In summary, the inventors of the present case identified two immunogenic MPHOSPH1-LPs that can induce Th cells. One of them contains HLA-A2 restricted and HLA-A24 restricted CTL epitopes. The results suggest that MPHOSPH1-LP provides a useful tool for delivering MPHOSPH1-specific Th1 cells and CTLs. These findings support possible clinical trials of immunotherapy based on MPHOSPH1 peptides for many types of cancer, such as bladder cancer. In addition, a convergent TCR expressed on LP-specific Th cells may be useful for monitoring LP-specific Th cells in vitro and possibly in vivo.

產業利用性 Industrial availability

本發明敘述能誘導有效抗腫瘤免疫反應之衍生自MPHOSPH1的Th1細胞抗原決定位胜肽,且因此對於廣範圍的癌症類型有用。此種胜肽擔保作為抗癌之胜肽疫苗的進一步發展,尤其對抗表現MPHOSPH1之癌症。本發明之胜肽可誘導Th1細胞反應,且因而由Th1細胞分泌的細胞素可幫助或活化任何以抗原獨立方式擔任細胞免疫的免疫細胞。因此本發明提供的免疫治療策略可適用於包括癌的任意疾病,只要此疾病可藉由由MHC第II類分子媒介之免疫反應而改善。具體而言,本發明之Th1細胞能改善由CTL引起的免疫反應。因此本發明之胜肽對於增強對象中包括癌之疾病的CTL反應有助益。 The present invention describes a Th1 cell epitope peptide derived from MPHOSPH1 that can induce an effective anti-tumor immune response and is therefore useful for a wide range of cancer types. This peptide guarantees the further development of a peptide vaccine against cancer, especially against cancers expressing MPHOSPH1. The peptides of the present invention can induce a Th1 cell response, and thus the cytokines secreted by Th1 cells can help or activate any immune cells that act as cellular immunity in an antigen-independent manner. Therefore, the immunotherapy strategy provided by the present invention can be applied to any disease including cancer, as long as the disease can be improved by the immune response of MHC class II molecular mediator. Specifically, the Th1 cells of the present invention can improve the immune response caused by CTL. Therefore, the peptide of the present invention is useful for enhancing the CTL response of a disease including cancer in a subject.

又,於較佳具體例,本發明之胜肽也誘導對抗表現MPHOSPH1之細胞的CTL及Th1細胞。本發明之如此的胜肽,對於治療相關於MPHOSPH1之疾病,例如表現MPHOSPH1之癌症,更具體而言,膀胱癌及乳癌亦為有效。 Furthermore, in a preferred embodiment, the peptide of the present invention also induces CTL and Th1 cells against cells expressing MPHOSPH1. Such a peptide of the present invention is also effective for treating diseases related to MPHOSPH1, such as cancer expressing MPHOSPH1, and more specifically, bladder cancer and breast cancer.

雖已對於本發明參照特定具體例詳盡敘述,但應了解上述敘述的本質係示範性及解說性,係用來供理解本發明及其較佳具體例。該技術領域中具有通常知識者可輕易理解經由例行實驗可在不偏離本發明精神及範圍之下進行各種改變及潤飾,本發明的邊界和界限由附帶的申請專利範圍界定。 Although the present invention has been described in detail with reference to specific specific examples, it should be understood that the essence of the above description is exemplary and illustrative, and is provided for understanding the present invention and its preferred specific examples. Those with ordinary knowledge in the technical field can easily understand that various changes and modifications can be made without departing from the spirit and scope of the present invention through routine experiments. The boundaries and boundaries of the present invention are defined by the scope of the attached patent application.

<110> 腫瘤療法科學股份有限公司 <110> Cancer Therapy Science Co., Ltd.

<120> 對於TH1細胞的MPHOSPH1抗原決定位胜肽及包含其之疫苗 <120> MPHOSPH1 epitope peptide for TH1 cells and vaccine containing the same

<130> ONC-A1608-TW <130> ONC-A1608-TW

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<211> 15 <211> 15

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 17 <400> 17

<210> 18 <210> 18

<211> 15 <211> 15

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 18 <400> 18

<210> 19 <210> 19

<211> 14 <211> 14

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 19 <400> 19

<210> 20 <210> 20

<211> 15 <211> 15

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 20 <400> 20

<210> 21 <210> 21

<211> 15 <211> 15

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 21 <400> 21

<210> 22 <210> 22

<211> 15 <211> 15

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 22 <400> 22

<210> 23 <210> 23

<211> 15 <211> 15

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 23 <400> 23

<210> 24 <210> 24

<211> 14 <211> 14

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 24 <400> 24

<210> 25 <210> 25

<211> 14 <211> 14

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 25 <400> 25

<210> 26 <210> 26

<211> 14 <211> 14

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 26 <400> 26

<210> 27 <210> 27

<211> 14 <211> 14

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 27 <400> 27

<210> 28 <210> 28

<211> 14 <211> 14

<212> PRT <212> PRT

<213> 人類 <213> Human

<400> 28 <400> 28

<210> 29 <210> 29

<211> 45 <211> 45

<212> DNA <212> DNA

<213> 人類 <213> Human

<220> <220>

<221> misc_feature <221> misc_feature

<222> (78)..(78) <222> (78) .. (78)

<223> n is a,c,g,or t <223> n is a, c, g, or t

<400> 29 <400> 29

<210> 30 <210> 30

<211> 42 <211> 42

<212> DNA <212> DNA

<213> 人類 <213> Human

<400> 30 <400> 30

Claims (28)

一種單離的胜肽,其長度為10-30個胺基酸且包含序列識別號:6或8的一部分胺基酸序列,其中該胜肽包含選自由以下構成之群組的胺基酸序列:(a)一連續的胺基酸序列,其具有選自於序列識別號:1或2之胺基酸序列中的長於9個胺基酸;及(b)一胺基酸序列,其中於(a)之胺基酸序列中有一個、二個或數個胺基酸係經取代、刪除、插入及/或附加,該胜肽有誘導Th1細胞的能力。     A isolated peptide having a length of 10-30 amino acids and containing a sequence identification number: 6 or a part of an amino acid sequence, wherein the peptide comprises an amino acid sequence selected from the group consisting of : (A) a continuous amino acid sequence having more than 9 amino acids selected from the amino acid sequence of the sequence identification number: 1 or 2; and (b) a amino acid sequence, wherein In the amino acid sequence of (a), one, two or several amino acids are substituted, deleted, inserted and / or added, and the peptide has the ability to induce Th1 cells.     如申請專利範圍第1項之單離的胜肽,其中,該胜肽或其片段有結合於至少2種MHC第II類分子的能力。     For example, the isolated peptide of item 1 of the patent application scope, wherein the peptide or a fragment thereof has the ability to bind to at least two MHC class II molecules.     如申請專利範圍第2項之單離的胜肽,其中,該MHC第II類分子選自於由HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9構成之群組。     For example, the isolated peptide of item 2 of the patent application scope, wherein the MHC class II molecule is selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9.     如申請專利範圍第1至3項中任一項之單離的胜肽,其中,該胜肽包含具有MPHOSPH1專一性CTL誘導能力之胜肽的胺基酸序列。     For example, the isolated peptide according to any one of claims 1 to 3, wherein the peptide comprises an amino acid sequence of a peptide having MPHOSPH1 specific CTL inducing ability.     如申請專利範圍第4項之單離的胜肽,其中,該胜肽包含選自由以下構成之群組的胺基酸序列:(a)一胺基酸序列,其選自於序列識別號:1至2構成之群組;及(b)一胺基酸序列,其中於(a)之胺基酸序列中有一個、二個或數個胺基酸係經取代、刪除、插入及/或附加。     For example, the isolated peptide of item 4 of the patent application scope, wherein the peptide comprises an amino acid sequence selected from the group consisting of: (a) a monoamino acid sequence selected from a sequence identification number: A group consisting of 1 to 2; and (b) an amino acid sequence in which one, two, or several amino acids are substituted, deleted, inserted, and / or in the amino acid sequence of (a) Attached.     一種單離的聚核苷酸,其編碼為如申請專利範圍第1至5項中任一項之胜肽。     An isolated polynucleotide encoding a peptide as described in any one of claims 1 to 5 of the patent application scope.     一種組合物,係用於誘導選自於由以下構成之群組中至少一種 細胞:(i)Th1細胞;(ii)CTL;(iii)有能力誘導Th1細胞之APC;及(iv)有能力誘導CTL之APC;其中該組合物包含一或多種如申請專利範圍第1至5項中任一項之胜肽,或一或多種編碼為此等胜肽的聚核苷酸。     A composition for inducing at least one cell selected from the group consisting of: (i) Th1 cells; (ii) CTL; (iii) APC capable of inducing Th1 cells; and (iv) capable of APC that induces CTL; wherein the composition comprises one or more peptides according to any one of claims 1 to 5, or one or more polynucleotides encoding such peptides.     一種醫藥組合物,包含選自於由以下構成之群組中之至少一種有效成分:(a)一或多種如申請專利範圍第1至5項中任一項之胜肽;(b)一或多種如申請專利範圍第6項之聚核苷酸;(c)一或多種APC,其在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合;且此組合物被配製為供選自於由下列構成之群組中之用途:(i)癌治療;(ii)癌預防;(iii)預防癌之術後再復發;及(iv)上述(i)至(iii)中任意兩或更多種的組合。     A pharmaceutical composition comprising at least one active ingredient selected from the group consisting of: (a) one or more peptides according to any one of claims 1 to 5 in the patent application scope; (b) one or A plurality of polynucleotides such as those in the scope of patent application No. 6; (c) one or more APCs that present on the surface a peptide or a fragment thereof as in any of the scopes of patent applications No. 1 to 5; (d) One or more Th1 cells, which recognizes an APC that presents a peptide or fragment thereof according to any one of claims 1 to 5 on the surface; and (e) any two or more of (a) to (d) above or More combinations; and this composition is formulated for use in a group selected from: (i) cancer treatment; (ii) cancer prevention; (iii) prevention of recurrence of cancer after surgery; And (iv) a combination of any two or more of (i) to (iii) above.     如申請專利範圍第8項之醫藥組合物,其中該組合物被配製為 供對於具有選自於由HLA-DP2、HLA-DP5、HLA-DR4及HLA-DR9構成之群組中至少一種作為MHC第II類分子之對象投予。     For example, the pharmaceutical composition under the scope of patent application No. 8 wherein the composition is formulated for use as MHC for having at least one member selected from the group consisting of HLA-DP2, HLA-DP5, HLA-DR4, and HLA-DR9. Targeted administration of Class II molecules.     如申請專利範圍第8或9項之醫藥組合物,其中該組合物更包含有CTL誘導能力之一或多種胜肽。     For example, the pharmaceutical composition of claim 8 or 9, wherein the composition further comprises one or more peptides capable of CTL induction.     一種組合物,係供增強由MHC第II類分子媒介之免疫反應,該組合物包含選自於由以下構成之群組中之至少一種有效成分:(a)一或多種如申請專利範圍第1至5項中任一項之胜肽;(b)一或多種如申請專利範圍第6項之聚核苷酸;(c)一或多種APC,其在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合。     A composition for enhancing the immune response of MHC class II molecular mediators, the composition comprising at least one active ingredient selected from the group consisting of: (a) one or more of A peptide according to any one of 5 to 5 items; (b) one or more polynucleotides as claimed in item 6 of the patent application scope; (c) one or more APCs that appear on the surface as shown in claims 1 to 1 of the patent application scope The peptide or fragment thereof according to any one of 5 items; (d) one or more Th1 cells that recognize the APC that presents the peptide or fragment thereof according to any one of claims 1 to 5 on the surface; And (e) a combination of any two or more of (a) to (d) above.     一種誘導APC之方法,該APC有能力誘導Th1細胞,該方法包含使APC於體外、生物體外或體內與如申請專利範圍第1至5項中任一項之胜肽接觸的步驟。     A method for inducing APC, the APC being capable of inducing Th1 cells, the method comprising the step of contacting APC with a peptide of any one of claims 1 to 5 in vitro, in vitro or in vivo.     一種誘導APC之方法,該APC有能力誘導CTL,該方法包含選自於由以下構成之群組中之步驟:(a)使APC於體外、生物體外或體內與如申請專利範圍第1至5項中任一項之胜肽接觸;及(b)將編碼為如申請專利範圍第1至5項中任一項之胜肽的聚核苷酸導入APC。     A method for inducing APC, the APC being capable of inducing CTL, the method comprising the steps selected from the group consisting of: (a) inducing APC in vitro, in vitro or in vivo, and as described in patent application scopes 1 to 5 Contacting a peptide according to any one of the items; and (b) introducing into the APC a polynucleotide encoding the peptide as described in any one of the claims 1 to 5 of the patent application scope.     一種誘導Th1細胞之方法,包含選自於由以下構成之群組中之步驟:(a)共同培養CD4 + T細胞,及在表面呈現MHC第II類分子與如申請專利範圍第1至5項中任一項之胜肽或其片段之複合體的APC;及(b)將編碼為兩種TCR次單元之聚核苷酸、或編碼為各TCR次單元之聚核苷酸導入CD4 + T細胞內,其中該TCR能結合於在細胞表面上呈現的MHC第II類分子與如申請專利範圍第1至5項中任一項之胜肽或其片段之複合體。 A method for inducing Th1 cells, comprising the steps selected from the group consisting of: (a) co-culturing CD4 + T cells, and presenting MHC class II molecules on the surface and as described in claims 1 to 5 of the patent application scope APC of a complex of any one of the peptides or fragments thereof; and (b) introduction of a polynucleotide encoding two TCR subunits, or a polynucleotide encoding each TCR subunit into a CD4 + T Intracellular, where the TCR is capable of binding to a complex of a MHC class II molecule presented on the cell surface and a peptide or a fragment thereof according to any one of the claims 1 to 5 of the patent application. 一種誘導CTL細胞之方法,該方法包含選自於由以下構成之群組中之步驟:(a)共同培養CD4 + T細胞與CD8 + T細胞兩者,及已接觸如申請專利範圍第4或5項之胜肽的APC;及(b)共同培養CD8 + T細胞,及已接觸如申請專利範圍第4或5項之胜肽的APC。 A method for inducing CTL cells, the method comprising the steps selected from the group consisting of: (a) co-cultivating both CD4 + T cells and CD8 + T cells, and having been contacted as claimed in patent application No. 4 or APC with 5 peptides; and (b) co-cultivation of CD8 + T cells, and APCs that have been exposed to peptides such as those in claims 4 or 5 of the patent application. 一種增強由MHC第II類分子媒介之免疫反應的方法,該方法包含對於對象投予選自於由以下構成之群組中之至少一種有效成分的步驟:(a)一或多種如申請專利範圍第1至5項中任一項之胜肽;(b)一或多種如申請專利範圍第6項之聚核苷酸;(c)一或多種APC,其在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合。     A method for enhancing an immune response by a MHC class II molecular medium, the method comprising the step of administering to a subject at least one active ingredient selected from the group consisting of: (a) one or more of The peptide of any one of items 1 to 5; (b) one or more polynucleotides as in the scope of patent application item 6; (c) one or more APCs that appear on the surface as in the scope of patent application scope 1 The peptide or fragment thereof according to any one of 5 to 5; (d) one or more Th1 cells that recognize the APC that presents the peptide or fragment thereof according to any one of claims 1 to 5 on the surface ; And (e) a combination of any two or more of (a) to (d) above.     一種單離的APC,其在表面上呈現MHC第II類分子與如申請專 利範圍第1至5項中任一項之胜肽或其片段之複合體。     A detached APC showing on its surface a complex of a MHC class II molecule and a peptide or a fragment thereof according to any one of claims 1 to 5 of the patent application.     一種APC,係由如申請專利範圍第12或13項之方法所誘導。     An APC is induced by a method such as the one in claim 12 or 13.     一種單離的Th1細胞,其辨識在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段之APC。     A isolated Th1 cell that recognizes an APC that presents a peptide or fragment thereof as described in any one of claims 1 to 5 on the surface.     一種Th1細胞,係由如申請專利範圍第14項之方法所誘導。     A Th1 cell is induced by a method as described in item 14 of the patent application.     如申請專利範圍第20項之Th1細胞,其中該TCR的α和β次單元分別包括由序列識別號:9和19的胺基酸序列所組成的CDR3。     For example, Th1 cells in the scope of application for patent No. 20, wherein the α and β subunits of the TCR include CDR3 consisting of the amino acid sequences of sequence identification numbers: 9 and 19.     一種誘導在有需要的對象中對抗癌之免疫反應的方法,該方法包含對於該對象投予包含選自於由以下構成之群組中至少一種有效成分的組合物的步驟:(a)一或多種如申請專利範圍第1至5項中任一項之胜肽;(b)一或多種如申請專利範圍第6項之聚核苷酸;(c)一或多種APC,其在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段;(d)一或多種Th1細胞,其辨識在表面上呈現如申請專利範圍第1至5項中任一項之胜肽或其片段之APC;及(e)以上(a)至(d)中任意兩或更多種的組合。     A method of inducing an immune response against cancer in a subject in need thereof, the method comprising the step of administering to the subject a composition comprising at least one active ingredient selected from the group consisting of: (a) a Or one or more of the peptides according to any of claims 1 to 5; (b) one or more of the polynucleotides according to claim 6; (c) one or more APCs on the surface Presenting a peptide or a fragment thereof as in any of claims 1 to 5 in the scope of patent application; (d) One or more Th1 cells, which are identified on the surface as present in any of claims 1 to 5 in the scope of patent application APC of a peptide or a fragment thereof; and (e) a combination of any two or more of (a) to (d) above.     一種抗體或其在免疫上有活性的片段,係對抗如申請專利範圍第1至5項中任一項之胜肽。     An antibody or an immunologically active fragment thereof is directed against a peptide such as any one of claims 1 to 5 of the scope of patent application.     一種載體,包含編碼為如申請專利範圍第1至5項中任一項之胜肽的核苷酸序列。     A vector comprising a nucleotide sequence encoded as a peptide according to any one of claims 1 to 5.     一種宿主細胞,其經過以如申請專利範圍第24項之表現載體轉 形或轉染。     A host cell that has been transformed or transfected with a performance vector such as that described in claim 24.     一種診斷套組,包含如申請專利範圍第1至5項中任一項之胜肽、如申請專利範圍第6項之聚核苷酸或如申請專利範圍第23項之抗體。     A diagnostic kit comprises a peptide as claimed in any one of claims 1 to 5, a polynucleotide as claimed in claim 6 or an antibody as described in claim 23.     一種在一個體中評估及/或監測對胜肽專一性的Th1反應的方法,該胜肽包括序列識別號:1或2的胺基酸序列,該方法包括:(a)提供取自經投予該胜肽的該個體的一樣本,其中該樣本包含T細胞;(b)偵測在該樣本中該T細胞的存在,該T細胞表現結合於MHC第II類分子與該胜肽或其片段之複合體的TCR;及(c)當在(b)中偵測到該T細胞的存在時,顯示對該胜肽專一性的Th1反應的誘導。     A method for assessing and / or monitoring a Th1 response specific to a peptide in a body, the peptide comprising an amino acid sequence having a sequence identification number: 1 or 2, the method comprising: (a) providing A sample of the individual of the peptide, wherein the sample contains T cells; (b) detecting the presence of the T cells in the sample, which T cells appear to bind to MHC class II molecules and the peptide or TCR of the fragment complex; and (c) when the presence of the T cell is detected in (b), it shows the induction of a peptide-specific Th1 response.     如申請專利範圍第27項的方法,其中該TCR包括一對特定的α和β次單元,其中每個α和β次單元分別包括由序列識別號:9和19的胺基酸序列組成的CDR3。     For example, the method of claim 27, wherein the TCR includes a specific pair of α and β subunits, wherein each α and β subunit includes a CDR3 consisting of amino acid sequences of sequence identification numbers: 9 and 19, respectively. .    
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