SG11202001676PA - Method and system for characterization for female reproductive system-related conditions associated with microorganisms - Google Patents

Method and system for characterization for female reproductive system-related conditions associated with microorganisms

Info

Publication number
SG11202001676PA
SG11202001676PA SG11202001676PA SG11202001676PA SG11202001676PA SG 11202001676P A SG11202001676P A SG 11202001676PA SG 11202001676P A SG11202001676P A SG 11202001676PA SG 11202001676P A SG11202001676P A SG 11202001676PA SG 11202001676P A SG11202001676P A SG 11202001676PA
Authority
SG
Singapore
Prior art keywords
characterization
microorganisms
conditions associated
related conditions
female reproductive
Prior art date
Application number
SG11202001676PA
Inventor
Zachary Apte
Elisabeth Bik
Sara W Bird
Luis Leon
Pamela A Nieto
Victor Algeria-Mera
Christian Bravo
Juan P Cardenas
Paulo Covarrubias
Sarah L Gupta
Kira Harman
Juan Jimenez
Felipe Melis-Arcos
Camila F Navas
Harold Nunez
Eduardo Olivares
Nicolas Ordenes-Aenishanslins
Francisco J Ossandon
Ignacio Varas
Patricia Vera-Wolf
Donna Marie B Hongo
Laurens Kraal
Nathaniel A Walton
Amanda Morton
Juan P Bustamante
Kwasi Addae
Graham Gass
Katia Soto-Liebe
Juan A Ugalde
Eduardo H Morales
Daniel Almonacid
Jessica Richman
Original Assignee
Psomagen Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Psomagen Inc filed Critical Psomagen Inc
Publication of SG11202001676PA publication Critical patent/SG11202001676PA/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701Specific hybridization probes
    • C12Q1/708Specific hybridization probes for papilloma
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20Supervised data analysis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/30Unsupervised data analysis
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/106Pharmacogenomics, i.e. genetic variability in individual responses to drugs and drug metabolism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays
SG11202001676PA 2017-08-28 2018-08-28 Method and system for characterization for female reproductive system-related conditions associated with microorganisms SG11202001676PA (en)

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US201762551155P 2017-08-28 2017-08-28
US201762585131P 2017-11-13 2017-11-13
US201862653402P 2018-04-05 2018-04-05
PCT/US2018/048412 WO2019046347A2 (en) 2017-08-28 2018-08-28 Method and system for characterization for female reproductive system-related conditions associated with microorganisms

Publications (1)

Publication Number Publication Date
SG11202001676PA true SG11202001676PA (en) 2020-03-30

Family

ID=64901054

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11202001676PA SG11202001676PA (en) 2017-08-28 2018-08-28 Method and system for characterization for female reproductive system-related conditions associated with microorganisms

Country Status (7)

Country Link
EP (1) EP3676405A2 (en)
JP (1) JP2020532979A (en)
KR (1) KR20200047626A (en)
CN (1) CN111278995A (en)
AU (1) AU2018323509A1 (en)
SG (1) SG11202001676PA (en)
WO (1) WO2019046347A2 (en)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US11149322B2 (en) * 2019-06-07 2021-10-19 Chapter Diagnostics, Inc. Methods and compositions for human papillomaviruses and sexually transmitted infections detection, identification and quantification
CN112126671B (en) * 2020-08-18 2021-08-31 中山大学附属第五医院 Application of streptococcus agalactiae streptococcus agalactiae in treating endometriosis
CN116568820A (en) * 2020-09-10 2023-08-08 迈克杰尼西斯公司 Methods and compositions related to assessment of fertility-related inflammatory conditions
CN112121066B (en) * 2020-11-25 2021-02-19 北京大学第三医院(北京大学第三临床医学院) Application of ruminococcus in preparation of medicine for treating polycystic ovarian syndrome and culture method
US20220341850A1 (en) * 2021-04-23 2022-10-27 Poppy Health, Inc. System and method for characterizing, monitoring, & detecting bioaerosol presence & movement in an indoor environment
CN115372482A (en) * 2021-05-17 2022-11-22 上海交通大学医学院附属仁济医院 Application of intestinal flora spectrum and metabolic markers in preparation of polycystic ovarian syndrome diagnostic kit
CN113215321B (en) * 2021-05-26 2022-09-30 北京毅新博创生物科技有限公司 Detection product for detecting genital tract pathogen by MALDI-TOF MS and application
CN113355456B (en) * 2021-05-26 2022-09-30 北京毅新博创生物科技有限公司 Preparation method of nucleic acid fingerprint spectrum library for detecting genital tract pathogens by MALDI TOF-MS
US11597980B2 (en) 2021-07-08 2023-03-07 Poppy Health, Inc. System and method for detecting pathogens in an environment via an electrostatic air sampler
WO2023042714A1 (en) * 2021-09-17 2023-03-23 国立大学法人東海国立大学機構 Method for detecting bacteria of genus fusobacterium in order to diagnose endometriosis
KR20230105080A (en) * 2022-01-03 2023-07-11 연세대학교 산학협력단 Method for providing information for diagnosis of endometriosis
CN114420210B (en) * 2022-03-28 2022-09-20 山东大学 Rapid trimming method and system for biological sequencing sequence
CN114480694B (en) * 2022-04-18 2022-06-17 北京起源聚禾生物科技有限公司 Vaginal microecological detection primer probe combination and kit

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20060246423A1 (en) * 2005-02-10 2006-11-02 Adelson Martin E Method and kit for the collection and maintenance of the detectability of a plurality of microbiological species in a single gynecological sample
KR101239387B1 (en) * 2010-06-17 2013-03-11 문우철 Dna chip for genotyping of human papilloma virus, kit comprising the same, and method for genotyping hpv
EP2981623A4 (en) * 2013-04-05 2016-11-23 Robert A Akins Systems and methods to assess microbiomes and treatments thereof
US10633714B2 (en) * 2013-07-21 2020-04-28 Pendulum Therapeutics, Inc. Methods and systems for microbiome characterization, monitoring and treatment
US9703929B2 (en) * 2014-10-21 2017-07-11 uBiome, Inc. Method and system for microbiome-derived diagnostics and therapeutics
US10415105B2 (en) * 2015-06-30 2019-09-17 uBiome, Inc. Method and system for diagnostic testing

Also Published As

Publication number Publication date
AU2018323509A1 (en) 2020-04-09
WO2019046347A2 (en) 2019-03-07
WO2019046347A9 (en) 2019-07-25
CN111278995A (en) 2020-06-12
JP2020532979A (en) 2020-11-19
EP3676405A2 (en) 2020-07-08
KR20200047626A (en) 2020-05-07
WO2019046347A3 (en) 2019-03-28

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