SG11202000581SA - Genomic services platform supporting multiple application providers - Google Patents

Genomic services platform supporting multiple application providers

Info

Publication number
SG11202000581SA
SG11202000581SA SG11202000581SA SG11202000581SA SG11202000581SA SG 11202000581S A SG11202000581S A SG 11202000581SA SG 11202000581S A SG11202000581S A SG 11202000581SA SG 11202000581S A SG11202000581S A SG 11202000581SA SG 11202000581S A SG11202000581S A SG 11202000581SA
Authority
SG
Singapore
Prior art keywords
multiple application
supporting multiple
services platform
platform supporting
application providers
Prior art date
Application number
SG11202000581SA
Other languages
English (en)
Inventor
James Lu
Jim Chou
William Lee
Chris Williams
James Warren
Ruomu Jiang
Original Assignee
Helix Opco Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Helix Opco Llc filed Critical Helix Opco Llc
Publication of SG11202000581SA publication Critical patent/SG11202000581SA/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
    • G06F16/90—Details of database functions independent of the retrieved data types
    • G06F16/95—Retrieval from the web
    • G06F16/951—Indexing; Web crawling techniques
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
    • G06F16/90—Details of database functions independent of the retrieved data types
    • G06F16/95—Retrieval from the web
    • G06F16/953—Querying, e.g. by the use of web search engines
    • G06F16/9535—Search customisation based on user profiles and personalisation
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F9/00—Arrangements for program control, e.g. control units
    • G06F9/06—Arrangements for program control, e.g. control units using stored programs, i.e. using an internal store of processing equipment to receive or retain programs
    • G06F9/46—Multiprogramming arrangements
    • G06F9/54—Interprogram communication
    • G06F9/547—Remote procedure calls [RPC]; Web services
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/10—Ontologies; Annotations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/30—Data warehousing; Computing architectures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/40—Encryption of genetic data
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/50—Compression of genetic data
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06Q—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL OR SUPERVISORY PURPOSES; SYSTEMS OR METHODS SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL OR SUPERVISORY PURPOSES, NOT OTHERWISE PROVIDED FOR
    • G06Q30/00—Commerce
    • G06Q30/06—Buying, selling or leasing transactions
    • G06Q30/0601—Electronic shopping [e-shopping]
    • H—ELECTRICITY
    • H04—ELECTRIC COMMUNICATION TECHNIQUE
    • H04L—TRANSMISSION OF DIGITAL INFORMATION, e.g. TELEGRAPHIC COMMUNICATION
    • H04L67/00—Network arrangements or protocols for supporting network services or applications
    • H04L67/01—Protocols
    • H04L67/10—Protocols in which an application is distributed across nodes in the network

Landscapes

  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Databases & Information Systems (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioethics (AREA)
  • Genetics & Genomics (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Software Systems (AREA)
  • Data Mining & Analysis (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Artificial Intelligence (AREA)
  • Molecular Biology (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
SG11202000581SA 2017-07-21 2018-07-16 Genomic services platform supporting multiple application providers SG11202000581SA (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201762535781P 2017-07-21 2017-07-21
US15/872,655 US10622095B2 (en) 2017-07-21 2018-01-16 Genomic services platform supporting multiple application providers
PCT/US2018/042235 WO2019018262A1 (fr) 2017-07-21 2018-07-16 Plateforme de services génomiques prenant en charge de multiples fournisseurs d'application

Publications (1)

Publication Number Publication Date
SG11202000581SA true SG11202000581SA (en) 2020-02-27

Family

ID=65015825

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11202000581SA SG11202000581SA (en) 2017-07-21 2018-07-16 Genomic services platform supporting multiple application providers

Country Status (6)

Country Link
US (1) US10622095B2 (fr)
EP (1) EP3655957A4 (fr)
AU (1) AU2018304108B2 (fr)
CA (1) CA3070585C (fr)
SG (1) SG11202000581SA (fr)
WO (1) WO2019018262A1 (fr)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10622095B2 (en) 2017-07-21 2020-04-14 Helix OpCo, LLC Genomic services platform supporting multiple application providers
US20200104463A1 (en) 2018-09-28 2020-04-02 Chris Glode Genomic network service user interface
US10861587B2 (en) * 2018-10-24 2020-12-08 Helix OpCo, LLC Cross-network genomic data user interface
CN110504007B (zh) * 2019-08-27 2023-03-14 上海美吉生物医药科技有限公司 一键化完成多场景菌种鉴定的工作方法及系统

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US20040018506A1 (en) * 2002-01-25 2004-01-29 Koehler Ryan T. Methods for placing, accepting, and filling orders for products and services
EP3261006A1 (fr) * 2003-04-09 2017-12-27 Omicia Inc. Procedes de selection, report et analyse de marqueurs genetiques a l'aide d'applications a profil genetique large
WO2008025093A1 (fr) * 2006-09-01 2008-03-06 Innovative Dairy Products Pty Ltd Évaluation génétique basée sur le génome entier et procédé de sélection
US20110296753A1 (en) * 2010-06-03 2011-12-08 Syngenta Participations Ag Methods and compositions for predicting unobserved phenotypes (pup)
WO2012097106A2 (fr) * 2011-01-11 2012-07-19 Locus Development, Inc. Systèmes et procédés pour obtenir et gérer des données de séquençage
US10621550B2 (en) * 2011-10-17 2020-04-14 Intertrust Technologies Corporation Systems and methods for protecting and governing genomic and other information
WO2013188838A2 (fr) * 2012-06-15 2013-12-19 Seqster, Inc. Stockage, récupération, analyse, tarification, et commercialisation de données de soins de santé personnelles à l'aide de réseaux sociaux, de réseaux d'experts, et de marchés
WO2014100509A1 (fr) * 2012-12-20 2014-06-26 Dnanexus Inc Interface de programmation d'application pour ensembles de données génomiques tabulaires
CN106462337B (zh) * 2014-02-13 2019-11-01 Illumina公司 综合式消费者基因组服务
EP3561075A1 (fr) * 2014-04-21 2019-10-30 Natera, Inc. Détection de mutations dans des biopsies et dans des échantillons acellulaires
AU2015311866B2 (en) * 2014-09-03 2018-06-07 Nant Holdings Ip, Llc Synthetic genomic variant-based secure transaction devices, systems and methods
WO2016036907A1 (fr) * 2014-09-05 2016-03-10 Admera Health LLC Système, procédé et interface utilisateur graphique pour créer des données d'analyse génomique transportables de patient modulaire
US20160215331A1 (en) * 2015-01-26 2016-07-28 Yale University Flexible and scalable genotyping-by-sequencing methods for population studies
EP3329491A2 (fr) 2015-03-23 2018-06-06 Edico Genome Corporation Procédé et système de visualisation du génome
CN116042833A (zh) * 2015-03-26 2023-05-02 奎斯特诊断投资股份有限公司 比对和变体测序分析管线
CA2982570C (fr) * 2015-04-13 2023-08-22 Invitae Corporation Procedes, systemes et processus d'identification de variation genetique dans des genes extremement similaires
WO2016193891A1 (fr) * 2015-05-30 2016-12-08 Ancestry.Com Dna, Llc Découverte de structure de populations à partir de modèles d'identité par descendance
US20170270245A1 (en) * 2016-01-11 2017-09-21 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods for performing secondary and/or tertiary processing
US20190026433A1 (en) 2017-07-21 2019-01-24 James Lu Genomic services platform supporting multiple application providers
US20190024161A1 (en) 2017-07-21 2019-01-24 Helix OpCo, LLC Genomic services platform supporting multiple application providers
US10622095B2 (en) 2017-07-21 2020-04-14 Helix OpCo, LLC Genomic services platform supporting multiple application providers
US10296842B2 (en) 2017-07-21 2019-05-21 Helix OpCo, LLC Genomic services system with dual-phase genotype imputation

Also Published As

Publication number Publication date
WO2019018262A1 (fr) 2019-01-24
AU2018304108A1 (en) 2020-03-05
EP3655957A4 (fr) 2020-07-15
CA3070585A1 (fr) 2019-01-24
US20190026428A1 (en) 2019-01-24
CA3070585C (fr) 2023-08-08
US10622095B2 (en) 2020-04-14
EP3655957A1 (fr) 2020-05-27
AU2018304108B2 (en) 2021-09-09

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