SG11201911977VA - Tuning and calibration features of a sequence-detection system - Google Patents

Tuning and calibration features of a sequence-detection system

Info

Publication number
SG11201911977VA
SG11201911977VA SG11201911977VA SG11201911977VA SG11201911977VA SG 11201911977V A SG11201911977V A SG 11201911977VA SG 11201911977V A SG11201911977V A SG 11201911977VA SG 11201911977V A SG11201911977V A SG 11201911977VA SG 11201911977V A SG11201911977V A SG 11201911977VA
Authority
SG
Singapore
Prior art keywords
tuning
sequence
detection system
calibration features
calibration
Prior art date
Application number
SG11201911977VA
Inventor
Jeffrey G Mandell
Kevin L Gunderson
Michael Gregory Keehan
Erin Christine Garcia
Original Assignee
Illumina Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Illumina Inc filed Critical Illumina Inc
Publication of SG11201911977VA publication Critical patent/SG11201911977VA/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • B01L3/5027Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
    • B01L3/502707Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by the manufacture of the container or its components
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • B01L3/5027Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
    • B01L3/502715Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by interfacing components, e.g. fluidic, electrical, optical or mechanical interfaces
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/26Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
    • G01N27/416Systems
    • G01N27/447Systems using electrophoresis
    • G01N27/44756Apparatus specially adapted therefor
    • G01N27/44791Microapparatus
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/483Physical analysis of biological material
    • G01N33/487Physical analysis of biological material of liquid biological material
    • G01N33/48707Physical analysis of biological material of liquid biological material by electrical means
    • G01N33/48721Investigating individual macromolecules, e.g. by translocation through nanopores

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Genetics & Genomics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Dispersion Chemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Hematology (AREA)
  • Clinical Laboratory Science (AREA)
  • Electrochemistry (AREA)
  • Pathology (AREA)
  • General Physics & Mathematics (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Transmission And Conversion Of Sensor Element Output (AREA)
  • Measurement Of Resistance Or Impedance (AREA)
  • Indication And Recording Devices For Special Purposes And Tariff Metering Devices (AREA)
  • Investigating Or Analyzing Materials By The Use Of Electric Means (AREA)
SG11201911977VA 2017-09-15 2018-09-14 Tuning and calibration features of a sequence-detection system SG11201911977VA (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201762559251P 2017-09-15 2017-09-15
PCT/US2018/051191 WO2019055856A1 (en) 2017-09-15 2018-09-14 Tuning and calibration features of a sequence-detection system

Publications (1)

Publication Number Publication Date
SG11201911977VA true SG11201911977VA (en) 2020-01-30

Family

ID=65723148

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201911977VA SG11201911977VA (en) 2017-09-15 2018-09-14 Tuning and calibration features of a sequence-detection system

Country Status (8)

Country Link
EP (1) EP3682023A4 (en)
JP (2) JP2020533951A (en)
KR (2) KR102322055B1 (en)
CN (1) CN111094540A (en)
AU (2) AU2018334245B2 (en)
CA (1) CA3067230A1 (en)
SG (1) SG11201911977VA (en)
WO (1) WO2019055856A1 (en)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US11210554B2 (en) 2019-03-21 2021-12-28 Illumina, Inc. Artificial intelligence-based generation of sequencing metadata
NL2023312B1 (en) * 2019-03-21 2020-09-28 Illumina Inc Artificial intelligence-based base calling
US11783917B2 (en) 2019-03-21 2023-10-10 Illumina, Inc. Artificial intelligence-based base calling
WO2020191387A1 (en) * 2019-03-21 2020-09-24 Illumina, Inc. Artificial intelligence-based base calling
US11593649B2 (en) 2019-05-16 2023-02-28 Illumina, Inc. Base calling using convolutions
AU2021224871A1 (en) 2020-02-20 2022-09-08 Illumina, Inc. Artificial intelligence-based many-to-many base calling
US20220336054A1 (en) 2021-04-15 2022-10-20 Illumina, Inc. Deep Convolutional Neural Networks to Predict Variant Pathogenicity using Three-Dimensional (3D) Protein Structures

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030215816A1 (en) * 2002-05-20 2003-11-20 Narayan Sundararajan Method for sequencing nucleic acids by observing the uptake of nucleotides modified with bulky groups
JP5519088B2 (en) * 2004-09-28 2014-06-11 ソニー株式会社 Nucleic acid molecule base sequence determination method and determination apparatus
JP2010026067A (en) * 2008-07-16 2010-02-04 Akita Prefectural Univ Braille reader
US8652779B2 (en) * 2010-04-09 2014-02-18 Pacific Biosciences Of California, Inc. Nanopore sequencing using charge blockade labels
WO2013188841A1 (en) * 2012-06-15 2013-12-19 Genia Technologies, Inc. Chip set-up and high-accuracy nucleic acid sequencing
US20140147833A1 (en) * 2012-11-28 2014-05-29 International Business Machines Corporation Base recognition based on the conformation change of a motor molecule
US8943611B2 (en) * 2013-07-23 2015-01-27 National Institute Of Standards And Technology Probe module, method for making and use of same
WO2015081178A1 (en) * 2013-11-26 2015-06-04 Illumina, Inc. Compositions and methods for polynucleotide sequencing
EP3152320B1 (en) * 2014-06-03 2020-10-28 Illumina, Inc. Compositions, systems, and methods for detecting events using tethers anchored to or adjacent to nanopores
CA2971268A1 (en) * 2014-12-18 2016-06-23 The Regents Of The University Of California Detection of nucleic acid polymerase conformational changes using a nanotube
BR112017023189A2 (en) * 2015-05-12 2018-07-31 Illumina Inc field effect apparatus and methods for sequencing nucleic acids
EP3334840A1 (en) * 2015-08-10 2018-06-20 Stratos Genomics, Inc. Single molecule nucleic acid sequencing with molecular sensor complexes
WO2017042038A1 (en) * 2015-09-10 2017-03-16 F. Hoffmann-La Roche Ag Polypeptide tagged nucleotides and use thereof in nucleic acid sequencing by nanopore detection

Also Published As

Publication number Publication date
KR20210135344A (en) 2021-11-12
JP2022084798A (en) 2022-06-07
KR20200026216A (en) 2020-03-10
CA3067230A1 (en) 2019-03-21
WO2019055856A1 (en) 2019-03-21
NZ759992A (en) 2022-03-25
US20200123603A1 (en) 2020-04-23
AU2018334245B2 (en) 2022-03-17
JP2020533951A (en) 2020-11-26
EP3682023A1 (en) 2020-07-22
CN111094540A (en) 2020-05-01
AU2022203458A1 (en) 2022-06-09
KR102322055B1 (en) 2021-11-04
AU2018334245A1 (en) 2020-01-16
EP3682023A4 (en) 2021-06-02

Similar Documents

Publication Publication Date Title
SG11201911977VA (en) Tuning and calibration features of a sequence-detection system
SG11202003607TA (en) Implant-cinching devices and systems
GB201516806D0 (en) Methods and systems for calibrating user devices
EP3111299A4 (en) Calibration of sensors and projector
EP3416368A4 (en) Calibration system and calibration apparatus
EP3308466A4 (en) Calibration and tracking of receiver
PL3329167T3 (en) Line element having an inner element and an outer element
EP3965705A4 (en) Measurement and ordering system for orthotic devices
IL272808B (en) Pyridinamine-pyridone and pyrimidinamine-pyridone compounds
GB2572956B (en) Calibration system and method
EP3529570A4 (en) A telemetric fitting and a method of telemetric measurement
EP3398775A4 (en) Bioprinter and calibration method thereof
EP3269056A4 (en) Methods and apparatuses for antenna calibration
GB201710767D0 (en) Methods and systems for manufacture of a garment
ZA201905681B (en) Methods and apparatuses for reference signal configuration
PL3682214T3 (en) Calibration device and process
GB201800552D0 (en) Clock calibration
ZA202001741B (en) Inhaler and mesh for an inhaler
EP3242794A4 (en) Zero-porosity npr structure and tuning of npr structure for particular localities
HUE054263T2 (en) Antenna segment and multi-segment antenna
IL292482B1 (en) Azaindolylpyridone and diazaindolylpyridone compounds
GB2559619B (en) Sensor calibration system
SG11201802305QA (en) Transmitter and receiver
GB201700404D0 (en) Compounds and composistions
GB2552948B (en) Calibration of measurement devices