SG11201506146TA - Highly selective nucleic acid amplification primers - Google Patents

Highly selective nucleic acid amplification primers

Info

Publication number
SG11201506146TA
SG11201506146TA SG11201506146TA SG11201506146TA SG11201506146TA SG 11201506146T A SG11201506146T A SG 11201506146TA SG 11201506146T A SG11201506146T A SG 11201506146TA SG 11201506146T A SG11201506146T A SG 11201506146TA SG 11201506146T A SG11201506146T A SG 11201506146TA
Authority
SG
Singapore
Prior art keywords
nucleic acid
acid amplification
highly selective
amplification primers
selective nucleic
Prior art date
Application number
SG11201506146TA
Inventor
Salvatore Marras
Diana Vargas-Gold
Sanjay Tyagi
Fred Russell Kramer
Original Assignee
Univ Rutgers
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Family has litigation
First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=51300164&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=SG11201506146T(A) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Application filed by Univ Rutgers filed Critical Univ Rutgers
Publication of SG11201506146TA publication Critical patent/SG11201506146TA/en

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00Preparation of compounds containing saccharide radicals
    • C12P19/26Preparation of nitrogen-containing carbohydrates
    • C12P19/28N-glycosides
    • C12P19/30Nucleotides
    • C12P19/34Polynucleotides, e.g. nucleic acids, oligoribonucleotides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6858Allele-specific amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/161Modifications characterised by incorporating target specific and non-target specific sites
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/191Modifications characterised by incorporating an adaptor
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/125Allele specific primer extension
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/131Allele specific probes

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • General Chemical & Material Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
SG11201506146TA 2013-02-07 2014-02-07 Highly selective nucleic acid amplification primers SG11201506146TA (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201361762117P 2013-02-07 2013-02-07
PCT/US2014/015351 WO2014124290A1 (en) 2013-02-07 2014-02-07 Highly selective nucleic acid amplification primers

Publications (1)

Publication Number Publication Date
SG11201506146TA true SG11201506146TA (en) 2015-09-29

Family

ID=51300164

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201506146TA SG11201506146TA (en) 2013-02-07 2014-02-07 Highly selective nucleic acid amplification primers

Country Status (11)

Country Link
US (3) US9909159B2 (en)
EP (2) EP2953958B1 (en)
JP (1) JP6544861B2 (en)
KR (2) KR102222546B1 (en)
CN (2) CN105102467B (en)
AU (1) AU2014214725B2 (en)
CA (2) CA3096478C (en)
IL (2) IL240347B (en)
SG (1) SG11201506146TA (en)
WO (1) WO2014124290A1 (en)
ZA (1) ZA201505637B (en)

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US10801070B2 (en) 2013-11-25 2020-10-13 The Broad Institute, Inc. Compositions and methods for diagnosing, evaluating and treating cancer
US11725237B2 (en) 2013-12-05 2023-08-15 The Broad Institute Inc. Polymorphic gene typing and somatic change detection using sequencing data
KR20160101073A (en) 2013-12-20 2016-08-24 더 브로드 인스티튜트, 인코퍼레이티드 Combination therapy with neoantigen vaccine
WO2016100977A1 (en) 2014-12-19 2016-06-23 The Broad Institute Inc. Methods for profiling the t-cel- receptor repertoire
WO2016100975A1 (en) 2014-12-19 2016-06-23 Massachsetts Institute Ot Technology Molecular biomarkers for cancer immunotherapy
CN116196401A (en) 2015-05-20 2023-06-02 博德研究所 Consensus neoantigens
CN105274096A (en) * 2015-09-07 2016-01-27 中国人民解放军第三军医大学第一附属医院 Bridge type fluorescent probe with bridge type sequence zone doping into mismatched bases and application and method
US11542547B2 (en) 2016-04-07 2023-01-03 Rutgers, The State University Of New Jersey Multiplex nucleic acid assay methods capable of detecting closely related alleles, and reagents therefor
CA3023256A1 (en) * 2016-05-18 2017-11-23 Integrated Nano-Technologies, Inc. Method for detection of a pcr product
CN106399484B (en) * 2016-08-31 2020-03-24 中国人民解放军第三军医大学第一附属医院 Double-bubble fluorescent probe and application and kit thereof
US11434540B2 (en) * 2016-11-15 2022-09-06 Arizona Board Of Regents On Behalf Of Arizona State University Ultraspecific nucleic acid sensors for low-cost liquid biopsies
US11549149B2 (en) 2017-01-24 2023-01-10 The Broad Institute, Inc. Compositions and methods for detecting a mutant variant of a polynucleotide
WO2018175258A1 (en) * 2017-03-20 2018-09-27 Illumina, Inc. Methods and compositions for preparing nuclelic acid libraries
JP7240733B2 (en) 2017-05-23 2023-03-16 ラトガース,ザ ステート ユニバーシティ オブ ニュー ジャージー Target-mediated in situ signal amplification using dual-interacting hairpin probes
US20210071246A1 (en) * 2018-01-12 2021-03-11 Natera, Inc. Novel primers and uses thereof
WO2019150414A1 (en) * 2018-01-30 2019-08-08 学校法人 慶應義塾 Method for detecting nucleic acid
CN110964814B (en) * 2018-09-30 2024-05-03 迈克生物股份有限公司 Primers, compositions and methods for nucleic acid sequence variation detection
CN111647650B (en) * 2020-07-06 2023-06-27 河南赛诺特生物技术有限公司 Primer, primer probe composition and kit for detecting V600E mutation of human B-raf gene
CN112575072B (en) * 2020-12-29 2021-12-31 苏州科贝生物技术有限公司 Primer pair and kit for detecting BRAF gene V600E mutation in plasma free DNA
US20230112648A1 (en) * 2021-09-17 2023-04-13 Homology Medicines, Inc. Non-naturally occurring polyadenylation elements and methods of use thereof
CN116121453A (en) * 2022-11-11 2023-05-16 重庆浦济生命科技有限公司 Improved structure of high-sensitivity fluorescent PCR detection primer and probe and application thereof

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US5866336A (en) * 1996-07-16 1999-02-02 Oncor, Inc. Nucleic acid amplification oligonucleotides with molecular energy transfer labels and methods based thereon
US6207379B1 (en) 1998-09-11 2001-03-27 One Lambda Method for amplification of DNA
US6277607B1 (en) 1999-05-24 2001-08-21 Sanjay Tyagi High specificity primers, amplification methods and kits
US7198897B2 (en) 2001-12-19 2007-04-03 Brandeis University Late-PCR
WO2006095941A1 (en) 2005-03-05 2006-09-14 Seegene, Inc. Processes using dual specificity oligonucleotide and dual specificity oligonucleotide
KR100977186B1 (en) 2005-03-05 2010-08-23 주식회사 씨젠 Processes Using Dual Specificity Oligonucleotide and Dual Specificity Oligonucleotide
CA2610863C (en) * 2005-06-07 2017-01-17 Eragen Biosciences, Inc. Methods for detection and typing of nucleic acids
KR100860619B1 (en) 2006-02-23 2008-09-29 주식회사 씨젠 Oligonucleotides for Detecting Nucleic Acids of Pathogen Causing Sexually Transmitted Diseases
KR100881924B1 (en) * 2007-03-14 2009-02-04 주식회사 씨젠 Method for Detecting Nucleotide Variations Using Labelled Primers
EP2412718B1 (en) * 2009-03-26 2016-10-12 Xiamen Amoy Diagnostics Co., Ltd Loop-shaped primer employed in nucleic acid amplification and the use thereof
WO2011001496A1 (en) 2009-06-29 2011-01-06 株式会社 東芝 Sample analysis method and assay kit for use in the method
WO2011027966A2 (en) * 2009-09-03 2011-03-10 Seegene, Inc. Td probe and its uses
CA2778449C (en) * 2009-10-23 2017-06-20 Luminex Corporation Amplification primers with non-standard bases for increased reaction specificity
KR20110050327A (en) * 2009-11-07 2011-05-13 주식회사 씨젠 T h d primer target detection
KR101569476B1 (en) * 2009-12-21 2015-11-16 주식회사 씨젠 TSG Primer Target Detection
CN103703013A (en) 2011-02-14 2014-04-02 斯威夫特生物科学公司 Polynucleotide primers and probes
NO2817421T3 (en) 2012-02-20 2018-05-12

Also Published As

Publication number Publication date
CN110195097A (en) 2019-09-03
CA3096478A1 (en) 2014-08-14
KR20150115932A (en) 2015-10-14
ZA201505637B (en) 2016-07-27
IL240347B (en) 2019-02-28
JP6544861B2 (en) 2019-07-17
IL264555B (en) 2021-10-31
EP2953958A1 (en) 2015-12-16
AU2014214725B2 (en) 2018-04-05
US10815512B2 (en) 2020-10-27
EP2953958A4 (en) 2016-08-17
US11111515B2 (en) 2021-09-07
NZ710851A (en) 2020-11-27
IL264555A (en) 2019-02-28
KR20210024220A (en) 2021-03-04
KR102351434B1 (en) 2022-01-17
US20180216151A1 (en) 2018-08-02
US20150361475A1 (en) 2015-12-17
CA3096478C (en) 2021-06-22
CN105102467A (en) 2015-11-25
KR102222546B1 (en) 2021-03-08
EP3346016A1 (en) 2018-07-11
CA2900259C (en) 2020-12-29
EP3346016B1 (en) 2019-10-02
JP2016506748A (en) 2016-03-07
US20210164009A1 (en) 2021-06-03
WO2014124290A1 (en) 2014-08-14
AU2014214725A1 (en) 2015-08-20
CA2900259A1 (en) 2014-08-14
EP2953958B1 (en) 2018-04-11
US9909159B2 (en) 2018-03-06
IL240347A0 (en) 2015-09-24
CN105102467B (en) 2019-01-22

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