SG11201504266PA - Systems and methods for using an immunostaining mask to selectively refine ish analysis results - Google Patents

Systems and methods for using an immunostaining mask to selectively refine ish analysis results

Info

Publication number
SG11201504266PA
SG11201504266PA SG11201504266PA SG11201504266PA SG11201504266PA SG 11201504266P A SG11201504266P A SG 11201504266PA SG 11201504266P A SG11201504266P A SG 11201504266PA SG 11201504266P A SG11201504266P A SG 11201504266PA SG 11201504266P A SG11201504266P A SG 11201504266PA
Authority
SG
Singapore
Prior art keywords
immunostaining
mask
systems
methods
analysis results
Prior art date
Application number
SG11201504266PA
Inventor
Antti Seppo
Yousef Al-Kofahi
Dirk Ryan Padfield
Original Assignee
Gen Electric
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Gen Electric filed Critical Gen Electric
Publication of SG11201504266PA publication Critical patent/SG11201504266PA/en

Links

Classifications

    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00—Image analysis
    • G06T7/0002—Inspection of images, e.g. flaw detection
    • G06T7/0012—Biomedical image inspection
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00—Image analysis
    • G06T7/0002—Inspection of images, e.g. flaw detection
    • G06T7/0012—Biomedical image inspection
    • G06T7/0014—Biomedical image inspection using an image reference approach
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06V—IMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00—Scenes; Scene-specific elements
    • G06V20/60—Type of objects
    • G06V20/69—Microscopic objects, e.g. biological cells or cellular parts
    • G06V20/695—Preprocessing, e.g. image segmentation
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06V—IMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00—Scenes; Scene-specific elements
    • G06V20/60—Type of objects
    • G06V20/69—Microscopic objects, e.g. biological cells or cellular parts
    • G06V20/698—Matching; Classification
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00—Indexing scheme for image analysis or image enhancement
    • G06T2207/10—Image acquisition modality
    • G06T2207/10064—Fluorescence image
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00—Indexing scheme for image analysis or image enhancement
    • G06T2207/30—Subject of image; Context of image processing
    • G06T2207/30004—Biomedical image processing
    • G06T2207/30024—Cell structures in vitro; Tissue sections in vitro
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00—Indexing scheme for image analysis or image enhancement
    • G06T2207/30—Subject of image; Context of image processing
    • G06T2207/30004—Biomedical image processing
    • G06T2207/30072—Microarray; Biochip, DNA array; Well plate

Landscapes

  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • General Health & Medical Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Biomedical Technology (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Molecular Biology (AREA)
  • Multimedia (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Quality & Reliability (AREA)
  • Radiology & Medical Imaging (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Medical Informatics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
SG11201504266PA 2012-12-04 2013-11-05 Systems and methods for using an immunostaining mask to selectively refine ish analysis results SG11201504266PA (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US13/693,406 US9135694B2 (en) 2012-12-04 2012-12-04 Systems and methods for using an immunostaining mask to selectively refine ISH analysis results
PCT/US2013/068425 WO2014088744A1 (en) 2012-12-04 2013-11-05 Systems and methods for using an immunostaining mask to selectively refine ish analysis results

Publications (1)

Publication Number Publication Date
SG11201504266PA true SG11201504266PA (en) 2015-06-29

Family

ID=49681125

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201504266PA SG11201504266PA (en) 2012-12-04 2013-11-05 Systems and methods for using an immunostaining mask to selectively refine ish analysis results

Country Status (10)

Country Link
US (1) US9135694B2 (en)
EP (1) EP2929505B1 (en)
JP (1) JP2016505823A (en)
KR (1) KR20150091477A (en)
CN (1) CN104813366A (en)
AU (1) AU2013356581A1 (en)
CA (1) CA2890060A1 (en)
RU (1) RU2015119035A (en)
SG (1) SG11201504266PA (en)
WO (1) WO2014088744A1 (en)

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WO2017057970A1 (en) * 2015-09-30 2017-04-06 주식회사 싸이토젠 Optical cell identification method
EP3455789A1 (en) 2016-06-10 2019-03-20 Amnis Corporation A method to combine brightfield and fluorescent channels for cell image segmentation and morphological analysis using images obtained from imaging flow cytometer (ifc)
US10846848B2 (en) * 2016-06-10 2020-11-24 Hoffman-La Roche Inc. System for bright field image simulation
CN106327508B (en) * 2016-08-23 2019-04-02 马跃生 Ki67 index automatic analysis method
JP6959755B2 (en) * 2017-04-14 2021-11-05 シスメックス株式会社 Fluorescence image analyzer, fluorescence image analysis method and computer program
US10776607B2 (en) * 2017-05-19 2020-09-15 Case Western Reserve University Predicting prostate cancer biochemical recurrence and metastasis with computer extracted features from tumor nuclei and benign regions
JP7026694B2 (en) * 2017-09-27 2022-02-28 富士フイルム株式会社 Image analyzers, methods and programs
JP7080976B2 (en) * 2017-12-22 2022-06-06 ベンタナ メディカル システムズ， インコーポレイテッド Systems and methods for generating selective dye segmentation images for the cell type of interest
WO2019121555A1 (en) * 2017-12-22 2019-06-27 Ventana Medical Systems, Inc. System and method for classifying cells in tissue images based on membrane features
CN109003255B (en) * 2018-06-11 2020-11-10 武汉海星通技术股份有限公司 Cell nucleus segmentation method and system of fluorescence in-situ hybridization image
EP3644044B1 (en) * 2018-10-24 2020-12-23 Leica Biosystems Imaging, Inc. Camera exposure control when acquiring fluorescence in situ hybridization images
WO2022046494A1 (en) * 2020-08-24 2022-03-03 Applied Materials, Inc. Cell detection using segmentation based on nuclear staining and mfish images
RU2755392C1 (en) * 2021-02-25 2021-09-15 федеральное государственное бюджетное образовательное учреждение высшего образования "Ставропольский государственный аграрный университет" Method for fluorescent hybridization in situ using the fgfr1 dna probe in different mammalian species on cytological preparations
KR102441907B1 (en) * 2021-07-08 2022-09-08 가톨릭대학교 산학협력단 Image classification apparatus for cancer diagnosis and method for classifying image

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US7045292B2 (en) 1998-03-25 2006-05-16 University Of Manitoba Method and marker for identification of pre-malignancy and malignancy and therapeutic intervention
US20080241848A1 (en) 1998-05-09 2008-10-02 Ikonisys, Inc. Methods for prenatal diagnosis of aneuploidy
US6573043B1 (en) 1998-10-07 2003-06-03 Genentech, Inc. Tissue analysis and kits therefor
US7648826B1 (en) 1999-04-02 2010-01-19 The Regents Of The University Of California Detecting CYP24 expression level as a marker for predisposition to cancer
US20050037406A1 (en) 2002-06-12 2005-02-17 De La Torre-Bueno Jose Methods and apparatus for analysis of a biological specimen
US7760927B2 (en) * 2003-09-10 2010-07-20 Bioimagene, Inc. Method and system for digital image based tissue independent simultaneous nucleus cytoplasm and membrane quantitation
WO2005076216A2 (en) 2004-02-03 2005-08-18 Bioimagene, Inc. Method and system for automaticed digital image based flourescent in situ hybridization (fish) analysis
US7570797B1 (en) * 2005-05-10 2009-08-04 Kla-Tencor Technologies Corp. Methods and systems for generating an inspection process for an inspection system
EP1934607B1 (en) 2005-10-13 2013-08-28 Fundação D. Anna Sommer Champalimaud E Dr. Carlos Montez Champalimaud Multiplex in situ immunohistochemical analysis
WO2007106837A2 (en) 2006-03-13 2007-09-20 Ikonisys, Inc. Method for combining immunostaining and fish using covalently binding fluorophores
US7629125B2 (en) 2006-11-16 2009-12-08 General Electric Company Sequential analysis of biological samples
US8189884B2 (en) 2008-03-26 2012-05-29 General Electric Company Methods for assessing molecular expression of subcellular molecules
US9779213B2 (en) * 2008-07-25 2017-10-03 Fundacao D. Anna Sommer Champalimaud E Dr. Carlos Montez Champalimaud System for evaluating a pathological stage of prostate cancer
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US20110091081A1 (en) 2009-10-16 2011-04-21 General Electric Company Method and system for analyzing the expression of biomarkers in cells in situ in their tissue of origin

Also Published As

Publication number Publication date
RU2015119035A (en) 2017-01-12
US20140153811A1 (en) 2014-06-05
WO2014088744A1 (en) 2014-06-12
AU2013356581A2 (en) 2015-07-16
AU2013356581A1 (en) 2015-05-14
KR20150091477A (en) 2015-08-11
EP2929505B1 (en) 2019-10-16
US9135694B2 (en) 2015-09-15
CA2890060A1 (en) 2014-06-12
EP2929505A1 (en) 2015-10-14
JP2016505823A (en) 2016-02-25
CN104813366A (en) 2015-07-29

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