SG11201404349YA - Detection of target nucleic acid sequence by pto cleavage and extension-dependent signaling oligonucleotide hybridization assay - Google Patents

Detection of target nucleic acid sequence by pto cleavage and extension-dependent signaling oligonucleotide hybridization assay

Info

Publication number
SG11201404349YA
SG11201404349YA SG11201404349YA SG11201404349YA SG11201404349YA SG 11201404349Y A SG11201404349Y A SG 11201404349YA SG 11201404349Y A SG11201404349Y A SG 11201404349YA SG 11201404349Y A SG11201404349Y A SG 11201404349YA SG 11201404349Y A SG11201404349Y A SG 11201404349YA
Authority
SG
Singapore
Prior art keywords
extension
detection
nucleic acid
acid sequence
target nucleic
Prior art date
Application number
SG11201404349YA
Inventor
Joug Yoon Chun
Young Jo Lee
Original Assignee
Seegene Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Seegene Inc filed Critical Seegene Inc
Publication of SG11201404349YA publication Critical patent/SG11201404349YA/en

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6823Release of bound markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6818Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analyzing Non-Biological Materials By The Use Of Chemical Means (AREA)
SG11201404349YA 2012-02-02 2012-07-03 Detection of target nucleic acid sequence by pto cleavage and extension-dependent signaling oligonucleotide hybridization assay SG11201404349YA (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
KR20120010681 2012-02-02
KR1020120028429A KR20130101952A (en) 2012-02-02 2012-03-20 Detection of target nucleic acid sequence by pto cleavage and extension-dependent hybridization
PCT/KR2012/005281 WO2013115442A1 (en) 2012-02-02 2012-07-03 Detection of target nucleic acid sequence by pto cleavage and extension-dependent signaling oligonucleotide hybridization assay

Publications (1)

Publication Number Publication Date
SG11201404349YA true SG11201404349YA (en) 2014-08-28

Family

ID=49451920

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201404349YA SG11201404349YA (en) 2012-02-02 2012-07-03 Detection of target nucleic acid sequence by pto cleavage and extension-dependent signaling oligonucleotide hybridization assay

Country Status (15)

Country Link
US (2) US9868980B2 (en)
EP (1) EP2809797B1 (en)
JP (1) JP6005180B2 (en)
KR (2) KR20130101952A (en)
CN (2) CN106011234B (en)
AU (2) AU2012368436B2 (en)
BR (1) BR112014018940B1 (en)
CA (1) CA2862488C (en)
IL (1) IL233773B (en)
MX (1) MX361903B (en)
NO (1) NO20140948A1 (en)
RU (1) RU2608501C2 (en)
SG (1) SG11201404349YA (en)
WO (1) WO2013115442A1 (en)
ZA (1) ZA201405463B (en)

Families Citing this family (38)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
MX2017015093A (en) 2011-01-11 2023-03-10 Seegene Inc Detection of target nucleic acid sequences by pto cleavage and extension assay.
KR101569479B1 (en) 2011-03-29 2015-11-16 주식회사 씨젠 Detection of Target Nucleic Acid Sequence by PTO Cleavage and Extension-Dependent Cleavage
US9850524B2 (en) 2011-05-04 2017-12-26 Seegene, Inc. Detection of target nucleic acid sequences by PO cleavage and hybridization
KR20130101952A (en) 2012-02-02 2013-09-16 주식회사 씨젠 Detection of target nucleic acid sequence by pto cleavage and extension-dependent hybridization
JP5976849B2 (en) 2012-03-05 2016-08-24 シージーン アイエヌシー Detection of nucleotide mutations in target nucleic acid sequences by PTO cleavage and extension assays {Detection of Nucleotide Variation on Target Nucleic Acid Sequence PTO Cleavage and Extension Assay}
EP2839031B1 (en) * 2012-04-19 2017-03-29 Seegene, Inc. Detection of target nucleic acid sequence by pto cleavage and extension-dependent signaling oligonucleotide cleavage
KR101572682B1 (en) 2013-05-30 2015-11-30 케이맥(주) Real time quantitative and qualitative analizing method
WO2015147370A1 (en) 2014-03-28 2015-10-01 Seegene, Inc. Detection of target nucleic acid sequences using different detection temperatures
JP6734851B2 (en) 2014-12-09 2020-08-05 シージーン アイエヌシー Discrimination of signals for target nucleic acid sequences
US20180355413A1 (en) 2014-12-22 2018-12-13 Anapa Biotech A/S Dual quenching assay for multiplex detection of target nucleic acids
WO2017086762A1 (en) 2015-11-20 2017-05-26 Seegene, Inc. Method for calibrating a data set of a target analyte
WO2017135756A1 (en) 2016-02-05 2017-08-10 Seegene, Inc. Method for reducing noise level of data set for a target analyte
KR101961642B1 (en) * 2016-04-25 2019-03-25 (주)진매트릭스 A method for detecting target nucleic acid sequence using cleaved complementary tag fragment and a composition therefor
US11066704B2 (en) 2016-06-10 2021-07-20 Seegene, Inc. Methods for preparing tagging oligonucleotides
KR102264865B1 (en) 2016-06-30 2021-06-14 주식회사 씨젠 Fluorescence-detecting device for analysis of reaction
EP3512959B1 (en) * 2016-09-15 2021-08-11 Roche Diagnostics GmbH Methods for performing multiplexed pcr
KR102523355B1 (en) * 2016-12-23 2023-04-20 알베르트-루드빅스-유니베르지텟 푸라이부르그 2-piece vector probe
IL267372B2 (en) 2016-12-29 2024-02-01 Seegene Inc Method for reducing primer dimer formation and increasing amplification efficiency
KR102408564B1 (en) * 2017-03-28 2022-06-14 주식회사 씨젠 Analytical signal for determination of the presence of a target nucleic acid sequence
CN108823287B (en) * 2017-04-28 2019-04-12 厦门大学 A method of detection target nucleic acid sequence
WO2019045532A2 (en) 2017-08-31 2019-03-07 Seegene, Inc. Evaluation of performance of components using a pair of dimer-forming primers
KR102345601B1 (en) * 2017-09-29 2021-12-30 주식회사 씨젠 Detection of target nucleic acid sequences by PTO cleavage and extension-dependent extension analysis
US20190112636A1 (en) * 2017-10-16 2019-04-18 ChromaCode, Inc. Methods and compositions for nucleic acid detection
WO2019135567A1 (en) 2018-01-05 2019-07-11 Seegene, Inc. . Method for determining the presence or absence of m. tuberculosis, m. bovis and m. bovis bcg in a sample
BR112020019755A2 (en) 2018-04-20 2021-01-26 Seegene, Inc. method and apparatus for detecting a plurality of target nucleic acid sequences in the sample
KR20230031343A (en) * 2020-06-30 2023-03-07 스피디엑스 피티와이 리미티드 Multiplex detection of nucleic acids using mixed reporters
CN114250275B (en) * 2020-09-22 2023-04-28 武汉艾米森生命科技有限公司 Fluorescent quantitative PCR reaction system, PCR reaction kit and nucleic acid quantitative detection method
CN114622000B (en) * 2020-12-14 2024-05-07 厦门大学 Method for detecting target nucleic acid sequence with high specificity
CN112592964B (en) * 2020-12-17 2024-09-27 厦门大学 Method for performing multiplex detection of nucleic acids
WO2022192758A1 (en) * 2021-03-11 2022-09-15 BioSpyder Technologies, Inc. Tempo-span
WO2023043280A1 (en) * 2021-09-17 2023-03-23 주식회사 씨젠 Detection of target nucleic acid sequence by using synthetic non-natural base-bearing tag oligonucleotide
KR20240056605A (en) 2021-09-30 2024-04-30 주식회사 씨젠 Sample processing and analysis methods for molecular diagnostic systems
KR20240093623A (en) 2021-10-21 2024-06-24 주식회사 씨젠 Positive and negative reading device and method for target analyte in sample
CN114032337B (en) * 2021-12-14 2024-08-02 广州市金圻睿生物科技有限责任公司 Respiratory tract pathogen detection kit and preparation method and application thereof
CN114134219A (en) * 2021-12-14 2022-03-04 广州市金圻睿生物科技有限责任公司 Multiple nucleic acid detection system and preparation method and application thereof
KR20240028084A (en) 2022-08-24 2024-03-05 주식회사 멀티렉스 Label-conjugated Tag Probe and Uses thereof
WO2024106890A1 (en) * 2022-11-16 2024-05-23 주식회사 씨젠 Detection of target nucleic acid by quenching-pto cleavage and extension (q-ptoce) assay
WO2024181774A1 (en) * 2023-02-28 2024-09-06 Seegene, Inc. Detection of target nucleic acid by lpho-assisted pto cleavage and extension assay

Family Cites Families (44)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5210015A (en) 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5541311A (en) 1992-12-07 1996-07-30 Third Wave Technologies, Inc. Nucleic acid encoding synthesis-deficient thermostable DNA polymerase
US5538848A (en) 1994-11-16 1996-07-23 Applied Biosystems Division, Perkin-Elmer Corp. Method for detecting nucleic acid amplification using self-quenching fluorescence probe
JP4362150B2 (en) 1996-11-29 2009-11-11 サード ウェーブ テクノロジーズ,インコーポレーテッド FEN-1 endonuclease, mixture, and cleavage method
GB9812768D0 (en) 1998-06-13 1998-08-12 Zeneca Ltd Methods
US6322980B1 (en) 1999-04-30 2001-11-27 Aclara Biosciences, Inc. Single nucleotide detection using degradation of a fluorescent sequence
JP4724380B2 (en) 1999-04-20 2011-07-13 独立行政法人産業技術総合研究所 Nucleic acid probe used in nucleic acid measurement method and data analysis method
US7118860B2 (en) 1999-10-29 2006-10-10 Stratagene California Methods for detection of a target nucleic acid by capture
US7585632B2 (en) 1999-10-29 2009-09-08 Hologic, Inc. Compositions and methods for the detection of a nucleic acid using a cleavage reaction
US7381532B2 (en) * 1999-10-29 2008-06-03 Stratagene California Compositions and methods for the detection of a nucleic acid using a cleavage reaction
US6893819B1 (en) 2000-11-21 2005-05-17 Stratagene California Methods for detection of a nucleic acid by sequential amplification
AU7125401A (en) * 2000-05-19 2001-12-03 David J Marshall Materials and methods for detection of nucleic acids
US7309573B2 (en) 2000-11-21 2007-12-18 Stratagene California Methods for detection of a nucleic acid by sequential amplification
US7678541B2 (en) 2000-11-21 2010-03-16 Hologic, Inc. Methods and compositions for the detection of a nucleic acid using a non-invasive cleavage reaction
US9261460B2 (en) 2002-03-12 2016-02-16 Enzo Life Sciences, Inc. Real-time nucleic acid detection processes and compositions
WO2003033741A1 (en) 2001-10-16 2003-04-24 Aclara Biosciences, Inc. Universal e-tag primer and probe compositions and methods
AU2003217379A1 (en) 2002-02-15 2003-09-09 Somalogic, Inc. Methods and reagents for detecting target binding by nucleic acid ligands
GB0205455D0 (en) 2002-03-07 2002-04-24 Molecular Sensing Plc Nucleic acid probes, their synthesis and use
US8206904B2 (en) 2002-12-18 2012-06-26 Third Wave Technologies, Inc. Detection of nucleic acids
WO2005010199A2 (en) 2003-07-16 2005-02-03 Geneohm Sciences, Inc. Invasive cleavage reaction with electrochemical readout
WO2005047470A2 (en) * 2003-11-07 2005-05-26 U.S. Genomics, Inc. Intercalator fret donors or acceptors
EP1698897B1 (en) * 2003-12-19 2010-03-17 Nippon Steel Kankyo Engineering Co., Ltd. Novel mixtures for assaying nucleic acid, novel method of assaying nucleic acid with the use of the same and nucleic acid probe to be used therefor
US20050191682A1 (en) 2004-02-17 2005-09-01 Affymetrix, Inc. Methods for fragmenting DNA
WO2006005081A2 (en) * 2004-06-30 2006-01-12 Applera Corporation Compositions and methods for identifying nucleotides in polynucleotide sequences
US20060024714A1 (en) 2004-06-30 2006-02-02 Applera Corporation Compositions and methods for detecting and quantitating polynucleotide sequences
EP1885890A4 (en) 2005-05-26 2010-01-20 Univ Boston Quantification of nucleic acids and proteins using oligonucleotide mass tags
WO2007011946A2 (en) * 2005-07-15 2007-01-25 Applera Corporation Detection of nucleic acid amplification
WO2008083261A1 (en) * 2006-12-29 2008-07-10 Applera Corporation Systems and methods for detecting nucleic acids
JP2010514450A (en) * 2006-12-29 2010-05-06 アプライド バイオシステムズ インコーポレイテッド Nucleic acid detection method and system
FI20075124A0 (en) 2007-02-21 2007-02-21 Valtion Teknillinen Method and test kit for detection of nucleotide variations
KR20090067334A (en) 2007-12-21 2009-06-25 주식회사 씨젠 Methods for detecting target nucleic acid using nuclease activity of nucleic acid polymerase
MX2010010161A (en) 2008-03-15 2011-03-21 Hologic Inc Star Compositions and methods for analysis of nucleic acid molecules during amplification reactions.
US9234232B2 (en) * 2008-07-31 2016-01-12 Oxitec Limited Multiplex amplification and detection
CN102186997B (en) * 2008-08-15 2014-12-24 卡斯凯德生物体系股份有限公司 Detecting nucleic acid
GB0818355D0 (en) * 2008-10-08 2008-11-12 Smart Patents Ltd Universal beverage container marker
US20110212451A1 (en) 2008-11-13 2011-09-01 Riboxx Gmbh Rna detection method
EP2256215A1 (en) 2009-04-30 2010-12-01 Steffen Mergemeier Assay system using a nuclease activity of a nucleic acid polymerase
EP2248915B1 (en) 2009-05-05 2013-09-18 Qiagen GmbH Detection of multiple nucleic acid sequences in a reaction cartridge
WO2011027966A2 (en) 2009-09-03 2011-03-10 Seegene, Inc. Td probe and its uses
KR101569476B1 (en) 2009-12-21 2015-11-16 주식회사 씨젠 TSG Primer Target Detection
EP2569449A4 (en) 2010-05-14 2013-12-04 Life Technologies Corp Identification of nucleic acids
MX2017015093A (en) 2011-01-11 2023-03-10 Seegene Inc Detection of target nucleic acid sequences by pto cleavage and extension assay.
KR101569479B1 (en) 2011-03-29 2015-11-16 주식회사 씨젠 Detection of Target Nucleic Acid Sequence by PTO Cleavage and Extension-Dependent Cleavage
KR20130101952A (en) 2012-02-02 2013-09-16 주식회사 씨젠 Detection of target nucleic acid sequence by pto cleavage and extension-dependent hybridization

Also Published As

Publication number Publication date
AU2012368436B2 (en) 2016-05-12
JP2015505470A (en) 2015-02-23
AU2016204887B2 (en) 2018-01-25
CN106011234A (en) 2016-10-12
CA2862488C (en) 2018-11-20
BR112014018940B1 (en) 2021-03-23
RU2014133695A (en) 2016-03-27
US20150072887A1 (en) 2015-03-12
US9868980B2 (en) 2018-01-16
CN104145029B (en) 2016-06-01
CN104145029A (en) 2014-11-12
KR20140112060A (en) 2014-09-22
CN106011234B (en) 2019-11-12
MX361903B (en) 2018-12-18
RU2608501C2 (en) 2017-01-18
IL233773B (en) 2018-12-31
CA2862488A1 (en) 2013-08-08
NZ627919A (en) 2016-11-25
MX2014009403A (en) 2015-07-06
US10731203B2 (en) 2020-08-04
AU2012368436A1 (en) 2014-08-21
IL233773A0 (en) 2014-09-30
BR112014018940A2 (en) 2017-06-20
EP2809797A1 (en) 2014-12-10
KR101832867B1 (en) 2018-03-02
ZA201405463B (en) 2015-12-23
AU2016204887A1 (en) 2016-07-28
BR112014018940A8 (en) 2017-07-11
EP2809797A4 (en) 2015-09-09
KR20130101952A (en) 2013-09-16
NO20140948A1 (en) 2014-10-30
EP2809797B1 (en) 2018-11-28
JP6005180B2 (en) 2016-10-12
US20180127812A1 (en) 2018-05-10
WO2013115442A1 (en) 2013-08-08

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