PE20191228A1 - METHOD AND APPARATUS FOR COMPACT REPRESENTATION OF BIOINFORMATIC DATA - Google Patents

METHOD AND APPARATUS FOR COMPACT REPRESENTATION OF BIOINFORMATIC DATA

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Publication number
PE20191228A1
PE20191228A1 PE2019000807A PE2019000807A PE20191228A1 PE 20191228 A1 PE20191228 A1 PE 20191228A1 PE 2019000807 A PE2019000807 A PE 2019000807A PE 2019000807 A PE2019000807 A PE 2019000807A PE 20191228 A1 PE20191228 A1 PE 20191228A1
Authority
PE
Peru
Prior art keywords
compact representation
bioinformatic data
data
multiplicity
encoded
Prior art date
Application number
PE2019000807A
Other languages
Spanish (es)
Inventor
Daniele Renzi
Giorgio Zoia
Original Assignee
Genomsys Sa
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Genomsys Sa filed Critical Genomsys Sa
Priority to PE2019000807A priority Critical patent/PE20191228A1/en
Publication of PE20191228A1 publication Critical patent/PE20191228A1/en

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  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)

Abstract

Comprende un metodo y un aparato para la compresion de datos de secuencia genomica producidos por maquinas de secuenciacion genomica; las secuencias de nucleotidos se alinean con una o mas secuencias de referencia, clasificadas de acuerdo con los grados de precision de coincidencia, codificadas como una multiplicidad de capas de elementos de sintaxis, utilizando diferentes modelos fuente y codificadores de entropia para cada capa en la que se dividen los datos.It comprises a method and an apparatus for the compression of genomic sequence data produced by genomic sequencing machines; nucleotide sequences are aligned with one or more reference sequences, ranked according to degrees of matching precision, encoded as a multiplicity of layers of syntax elements, using different source patterns and entropy encoders for each layer in which the data is divided.

PE2019000807A 2016-10-11 2016-10-11 METHOD AND APPARATUS FOR COMPACT REPRESENTATION OF BIOINFORMATIC DATA PE20191228A1 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
PE2019000807A PE20191228A1 (en) 2016-10-11 2016-10-11 METHOD AND APPARATUS FOR COMPACT REPRESENTATION OF BIOINFORMATIC DATA

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PE2019000807A PE20191228A1 (en) 2016-10-11 2016-10-11 METHOD AND APPARATUS FOR COMPACT REPRESENTATION OF BIOINFORMATIC DATA

Publications (1)

Publication Number Publication Date
PE20191228A1 true PE20191228A1 (en) 2019-09-11

Family

ID=68542511

Family Applications (1)

Application Number Title Priority Date Filing Date
PE2019000807A PE20191228A1 (en) 2016-10-11 2016-10-11 METHOD AND APPARATUS FOR COMPACT REPRESENTATION OF BIOINFORMATIC DATA

Country Status (1)

Country Link
PE (1) PE20191228A1 (en)

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