OA20146A - Bi-specific monovalent diabodies that are capable of binding to GPA33 and CD3, and uses thereof. - Google Patents
Bi-specific monovalent diabodies that are capable of binding to GPA33 and CD3, and uses thereof. Download PDFInfo
- Publication number
- OA20146A OA20146A OA1201600052 OA20146A OA 20146 A OA20146 A OA 20146A OA 1201600052 OA1201600052 OA 1201600052 OA 20146 A OA20146 A OA 20146A
- Authority
- OA
- OAPI
- Prior art keywords
- domain
- seq
- diabody
- cells
- dart
- Prior art date
Links
Abstract
The present invention is directed to sequenceoptimized CD 123 x CD3 bi-specific monovalent diabodies that are capable of simultaneous binding to CD 123 and CD3, and to the uses of such diabodies in the treatment of hematologic malignancies.
Description
Title of the Invention:
Bi-Specific Monovalent Diabodies That Are Capable Of Binding CD123 And CD3, And Uses Thereof
Cross-Reference to Related Applications
[0001] This Application daims priority to United States Patent Applications No. 61/869,510 (filed on August 23, 2013; pending), 61/907,749 (filed on November 22, 2013; pending), and 61/990,475 (filed on May 8, 2014; pending), and European Patent Application No. 13198784 (filed on December 20, 2013), each of which applications is herein incorporated by reference in its entirety.
Reference to Sequence Listing:
[0002] This application includes one or more Sequence Listings pursuant to 37 C.F.R. 1.821 et seq., which are disclosed in both paper and computer-readable media, and which paper and computer-readable disclosures are herein incorporated by reference in their entirety.
Background of the Invention:
Field of the Invention:
[0003] The présent invention is directed to CD123 x CD3 bi-specific monovalent diabodies that are capable of simultaneous binding to CD 123 and CD3, and to the uses of such molécules in the treatment of hématologie malignancies.
Description of Related Art:
I. CD123
[0004] CD 123 (interleukin 3 receptor alpha, IL-3Ra) is a 40 kDa molécule and is part of the interleukin 3 receptor complex (Stomski, F.C. et al. (1996) “Human Interleukin-3 (IL-3) Incluces Disulfide-Linked IL-3 Receptor Alpha- And Beta-Chain Heterodimerization, Which Is Required For Receptor Activation But Not High-Affinity Binding,' Mol. Cell. Biol. 16(6):3035-3046). Interleukin 3 (IL-3) drives early différentiation of multipotent stem cells into cells of the erythroid, myeloid and lymphoid progenitors. CD 123 is expressed on CD34+ committed progenitors
- 1 20146 (Taussig, D.C. et al. (2005) “Hematopoietic Stem Cells Express Multiple Myeloid Markers: Implications For The Origin And Targeted Therapy Of Acute Myeloid Leukemia, Blood 106:4086-4092), but not by CD34+/CD38- normal hematopoietic stem cells. CD 123 is expressed by basophils, mast cells, plasmacytoid dendritic cells, some expression by monocytes, macrophages and eosinophils, and low or no expression by neutrophils and megakaryocytes. Some non-hematopoietic tissues (placenta, Leydig cells of the testis, certain brain cell éléments and some endothélial cells) express CD123; however expression is mostly cytoplasmic.
[0005] CD 123 is reported to be expressed by leukemic blasts and leukemia stem cells (LSC) (Jordan, C.T. et al. (2000) “The Interleukin-3 Receptor Alpha Chain Is A Unique Marker For Human Acute Myelogenous Leukemia Stem Cells, Leukemia 14:1777-1784; Jin, W. et al. (2009) “Régulation Of Thl7 Cell Différentiation And EAE Induction By MAP3K NIK, Blood 113:6603-6610) (Figure 1). In human normal precursor populations, CD 123 is expressed by a subset of hematopoietic progenitor cells (HPC) but not by normal hematopoietic stem cells (HSC). CD 123 is also expressed by plasmacytoid dendritic cells (pDC) and basophils, and, to a lesser extent, monocytes and eosinophils (Lopez, A.F. et al. (1989) “Reciprocal Inhibition Of Binding Between Interleukin 3 And Granulocyte-Macrophage Colony-Stimulating Factor To Human Eosinophils, Proc. Natl. Acad. Sci. (U.S.A.) 86:7022-7026; Sun, Q. et al. (1996) “Monoclonal Antibody 7G3 Recognizes The N-Terminal Domain Of The Human Interleukin-3 (IL-3) Receptor Alpha Chain And Functions As A Spécifie IL-3 Receptor Antagonist, Blood 87:83-92; Muhoz, L. et al. (2001) “Interleukin-3 Receptor Alpha Chain (CD 123) Is Widely Expressed In Hématologie Malignancies, Haematologica 86(12): 1261-1269; Masten, B.J. et al. (2006) “Characterization Of Myeloid And Plasmacytoid Dendritic Cells In Human Lung, J. Immunol. 177:77847793; Korpelainen, E.I. et al. (1995) “Interferon-Gamma Upregulates Interleukin-3 (IL-3) Receptor Expression In Human Endothélial Cells And Synergizes With IL-3 In Stimulating Major Histocompatibility Complex Class II Expression And Cytokine Production, Blood 86:176-182).
[0006] CD 123 has been reported to be overexpressed on malignant cells in a wide range of hématologie malignancies including acute myeloid leukemia (AML) and
-2 20146 myelodysplastic syndrome (MDS) (Munoz, L. et al. (2001) “InterleukinC Receptor Alpha Chain (CD123) Is Widely Expressed In Hématologie Malignancies, Haematologica 86(12):1261-1269). Overexpression of CD123 is associated with poorer prognosis in AML (Tettamanti, M.S. et al. (2013) “Targeting Of Acute Myeloid Leukaemia By Cytokine-Induced Killer Cells Redirected With A Novel CDI23-Specific Chimeric Antigen Receptor, Br. J. Haematol. 161:389-401).
[0007] AML and MDS are thought to arise in and be perpetuated by a small population of leukemic stem cells (LSCs), which are generally dormant (i.e., not rapidly dividing cells) and therefore resist cell death (apoptosis) and conventional chemotherapeutic agents. LSCs are charactcrized by high levcls of CD 123 expression, which is not présent in the corresponding normal hematopoietic stem cell population in normal human bone marrow (Jin, W. et al. (2009) “Régulation OfThl7 Cell Différentiation And EAE Induction By MAP3K NIKf Blood 113:6603-6610; Jordan, C.T. et al. (2000) “The Interleukin-3 Receptor Alpha Chain Is A Unique Marker For Human Acute Myelogenous Leukemia Stem Cells, Leukemia 14:17771784). CD123 is expressed in 45%-95% of AML, 85% of Hairy cell leukemia (HCL), and 40% of acute B lymphoblastic leukemia (B-ALL). CD 123 expression is also associated with multiple other malignancies/pre-malignancies: chronic myeloid leukemia (CML) progenitor cells (including blast crisis CML); Hodgkin’s Reed Sternberg (RS) cells; transformed non-Hodgkin’s lymphoma (NHL); some chronic lymphocytic leukemia (CLL) (CDI lc+); a subset of acute T lymphoblastic leukemia (T-ALL) (16%, most immature, mostly adult), plasmacytoid dendritic cell (pDC) (DC2) malignancies and CD34+/CD38- myelodysplastic syndrome (MDS) marrow cell malignancies.
[0008] AML is a clonal disease characterized by the prolifération and accumulation of transformed myeloid progenitor cells in the bone marrow, which ultimately leads to hematopoietic failure. The incidence of AML increases with âge, and older patients typically hâve worse treatment outcomes than do younger patients (Robak, T. et al. (2009) “Current And Emerging Thérapies For Acute Myeloid Leukemia, Clin. Ther. 2:2349-2370). Unfortunately, at présent, most adults with AML die from their disease.
!*h «1.. '' I ' h - ;
[0009] Treatment for AML initially focuses in the induction of remission (induction therapy). Once remission is achieved, treatment shifts to focus on securing such remission (post-remission or consolidation therapy) and, in some instances, maintenance therapy. The standard remission induction paradigm for AML is chemotherapy with an anthracycline/cytarabine combination, followed by either consolidation chemotherapy (usually with higher doses of the same drugs as were used during the induction period) or human stem cell transplantation, depending on the patient's ability to tolerate intensive treatment and the likelihood of cure with chemotherapy alone (see, e.g., Roboz, G.J. (2012) “Current Treatment Of Acute MyeloidLeukemiaf Curr. Opin. Oncol. 24:711-719).
[0010] Agents frequently used in induction therapy include cytarabine and the anthracyclines. Cytarabine, also known as AraC, kills cancer cells (and other rapidly dividing normal cells) by interfering with DNA synthesis. Side effects associated with AraC treatment include decreased résistance to infection, a resuit of decreased white blood cell production; bleeding, as a resuit of decreased platelet production; and anémia, due to a potential réduction in red blood cells. Other side effects include nausea and vomiting. Anthracyclines (e.g., daunorubicin, doxorubicin, and idarubicin) hâve several modes of action including inhibition of DNA and RNA synthesis, disruption of higher order structures of DNA, and production of cell damaging free oxygen radicals. The most consequential adverse effect of anthracyclines is cardiotoxicity, which considerably limits administered life-time dose and to some extent their usefulness.
[0011] Thus, unfortunately, despite substantial progress in the treatment of ncwly diagnosed AML, 20% to 40% of patients do not achieve remission with the standard induction chemotherapy, and 50% to 70% of patients entering a first complété remission are expected to relapse within 3 years. The optimum strategy at the time of relapse, or for patients with the résistant disease, remains uncertain. Stem cell transplantation has been established as the most effective form of anti-leukemic therapy in patients with AML in first or subséquent remission (Roboz, G.J. (2012) “Current Treatment Of Acute Myeloid Leukemia,” Curr. Opin. Oncol. 24:711-719).
I,
-47
IL CD3
[0012] CD3 is a T cell co-receptor composée! of four distinct chains (Wuchcrpfennig, K.W. et al. (2010) “Structural Biology Of The T-Cell Receptor: Insights Into Receptor Assembly, Ligand Récognition, And Initiation Of Signaling,” Cold Spring Harb. Perspect. Biol. 2(4):a005140; pages 1-14). In mammals, the complcx contains a CD3y chain, a CD36 chain, and two CD3c chains. These chains associate with a molécule known as the T cell receptor (TCR) in order to generate an activation signal in T lymphocytes. In the absence of CD3, TCRs do not assemble properly and are degraded (Thomas, S. et al. (2010) “Molecular Immunology: Lessons From Therapeutic T-Cell Receptor Gene Transfer,” Immunology 129(2):170-177). CD3 is found bound to the membranes of ail mature T cells, and in virtually no other cell type (see, Janeway, C.A. et al. (2005) In: Immunobiology: Tue Immune System In Health And Disease,” 6th ed. Garland Science Publishing, NY, pp. 214- 216; Sun, Z. J. et al. (2001) “Mechanisms Contributing To T Cell Receptor Signaling And Assembly Revealed By The Solution Structure Of An Ectodomain Fragment Of The CD3e:y Heterodimer,” Cell 105(7):913-923 ; Kuhns, M.S. et al. (2006) “Deconstructing The Form And Function Of The TCR/CD3 Complex,” Immunity 2006 Feb;24(2):133-139).
III. Bi-Specific Diabodies
[0013] The ability of an intact, unmodified antibody (e.g., an IgG) to bind an epitope of an antigen dépends upon the presence of variable domains on the immunoglobulin light and heavy chains (i.e., the VL and VH domains, respectively). The design of a diabody is based on the single chain Fv construct (scFv) (see, e.g., Holliger et al. (1993) “'Diabodies’: Small Bivalent And Bispecific Antibody Fragments,” Proc. Natl. Acad. Sci. (U.S.A.) 90:6444-6448; US 2004/0058400 (Hollinger et alf US 2004/0220388 (Mertens et ail); Alt étal. (1999) FEBS Lett. 454(1-2):90-94 ; Lu, D. et al. (2005) “A Fully Human Recombinant IgG-Like Bispecific Antibody To Both The Epidermal Growth Factor Receptor And The Insulin-Like Growth Factor Receptor For Enhanced Antitumor Activity,” J. Biol. Chem. 280(20): 19665-19672; WO 02/02781 (Mertens et alp, Olafsen, T. et al. (2004) “Covalent Disulfide-Linked AntiCEA Diabody Allows Site-Specific Conjugation And Radiolabeling For Tumor
- 5 20146
Targeting Applications” Protein Eng. Des. Sel. 17(l):21-27; Wu, A. et al. (2001) “Multimerization Of A Chimeric Anti-CD20 Single Chain Fv-Fv Fusion Protein Is Mediated Through Variable Domain Exchange,” Protein Engineering 14(2):10251033; Asano et al. (2004) “A Diabody For Cancer Immunotherapy AndIts Functional Enhancement By Fusion Of Human Fc Domain,” Abstract 3P-683, J. Biochem. 76(8):992; Takemura, S. et al. (2000) “Construction Of A Diabody (Small Recombinant Bispecific Antibody) Using A Refolding System,” Protein Eng. 13(8):583-588; Baeuerle, P.A. et al. (2009) “Bispecific T-Cell Engaging Antibodies For Cancer Therapy,” Cancer Res. 69(12):4941-4944).
[0014] Interaction of an antibody light chain and an antibody heavy chain and, in particular, interaction of its VL and VH domains forms one of the epitope binding sites of the antibody. In contrast, the scFv construct comprises a VL and VH domain of an antibody containcd in a single polypeptide chain wherein the domains arc separated by a flexible linker of sufficient length to allow self-assembly of the two domains into a functional epitope binding site. Where self-assembly ofthe VL and VH domains is rendered impossible duc to a linker of insuffïcicnt length (less than about 12 amino acid residues), two of the scFv constructs interact with one another other to form a bivalent molécule in which the VL of one chain associâtes with the VH of the other (reviewed in Marvin et al. (2005) “Recombinant Approaches To IgGLike Bispecific Antibodies, ” Acta Pharmacol. Sin. 26:649-658).
[0015] Natural antibodies are capable of binding to only one epitope species (i.e., mono-specific), although they can bind multiple copies of that species (i.e., exhibiting bi-valcncy or multi-valcncy). The art has noted the capability to produce diabodics that differ from such natural antibodies in being capable of binding two or more different epitope species (i.e., exhibiting bi-specificity or multispecificity in addition to bi-valency or multi-valency) (see, e.g., Holliger et al. (1993) “’Diabodies ’: Small Bivalent And Bispecific Antibody Fragments,” Proc. Natl. Acad. Sci. (U.S.A.) 90:6444-6448; US 2004/0058400 (Hollinger et al fi US 2004/0220388 (Mertens et al fi, Alt et al. (1999) FEBS Lett. 454(1-2):90-94; Lu, D. et al. (2005) “A Fully Human Recombinant IgG-Like Bispecific Antibody To Both The Epidermal Growth Factor Receptor And The Insulin-Like Growth Factor Receptor For Enhanced Antitumor
-620146
Activity,” J. Biol. Chem. 280(20):19665-19672; WO 02/02781 (Mertens et al.); Mertens, N. et al., “New Recombinant Bi- and Trispecific Antibody Dérivatives,” In: Novel Frontiers In The Production Of Compounds For Biomédical Use, A. VanBroekhoven et al. (Eds.), Kluwer Academie Publishers, Dordrecht, The Netherlands (2001), pages 195-208; Wu, A. et al. (2001) “Multimerization Of A Chimeric Anti-CD20 Single Chain Fv-Fv Fusion Protein Is Mediated Through Variable Domain Exchange,” Protein Engineering 14(2):1025-1033; Asano et al. (2004) “A Diabody For Cancer Immunotherapy And Its Functional Enhancement By Fusion Of Human Fc Domain,” Abstract 3P-683, J. Biochem. 76(8):992; Takemura, S. et al. (2000) “Construction Of A Diabody (Small Recombinant Bispecific Antibody) Using A Refolding System,” Protein Eng. 13(8):583-588; Baeuerle, P.A. et al. (2009) “Bispecific T-Cell Engaging Antibodies For Cancer Therapy,” Cancer Res. 69(12):4941-4944).
[0016] The provision of non-monospecific diabodies provides a significant advantage: the capacity to co-ligate and co-localize cells that express different épitopes. Bi-spccific diabodies thus hâve wide-ranging applications including therapy and immunodiagnosis. Bi-specificity allows for great flexibility in the design and engineering of the diabody in various applications, providing enhanced avidity to multimeric antigens, the cross-linking of differing antigens, and directed targeting to spécifie cell types relying on the presence of both target antigens. Due to their increased valency, low dissociation rates and rapid clearance from the circulation (for diabodies of small size, at or below ~50 kDa), diabody molécules known in the art hâve also shown particular use in the field of tumor imaging (Fitzgerald et al. (1997) “Iniproved Tumour Targeting By Disulphide Stabilized Diabodies Expressed In Pichia pastoris, ” Protein Eng. 10:1221). Of particular importance is the co-ligating of differing cells, for example, the cross-linking of cytotoxic T cells to tumor cells (Staerz et al. (1985) “Hybrid Antibodies Can Target Sites For Attack By T Cells, ” Nature 314:628-631, and Elolliger et al. (1996) “Spécifie Killing Of Lymphoma Cells By Cytotoxic T-Cells MediatedBy A Bispecific Diabody, ” Protein Eng. 9:299-305).
[0017] Diabody epitope binding domains may also be directed to a surface déterminant of any immune effector cell such as CD3, CD16, CD32, or CD64, which
-7 20146 are expressed on T lymphocytes, natural killer (NK) cells or other mononuclear cells. In many studies, diabody binding to effector cell déterminants, e.g., Fcy receptors (FcyR), was also found to activate the effector cell (Holliger et al. (1996) “Spécifie Killing Of Lymphoma Cells By Cytotoxic T-Cells Mediated By A Bispecific Diabody, ” Protein Eng. 9:299-305; Holliger et al. (1999) “Carcinoemhryonic Antigen (CEA)Specific T-cell Activation In Colon Carcinoma Induced By Anti-CD3 x Anti-CEA Bispecific Diabodies And B7 x Anti-CEA Bispecific Fusion Proteins, ” Cancer Res. 59:2909-2916; WO 2006/113665; WO 2008/157379; WO 2010/080538; WO 2012/018687; WO 2012/162068). Normally, effector cell activation is triggered by the binding of an antigen bound antibody to an effector cell via Fc-FcyR interaction; thus, in this regard, diabody molécules may exhibit Ig-like functionality independent of whether they comprise an Fc Domain (e.g., as assayed in any effector function assay known in the art or exemplified herein (e.g., ADCC assay)). By cross-linking tumor and effector cells, the diabody not only brings the effector cell within the proximity of the tumor cells but leads to effective tumor killing (see e.g., Cao et al. (2003) “Bispecific Antibody Conjugates In Therapeutics, ” Adv. Drug. Deliv. Rev. 55:171-197).
[0018] However, the above advantages corne at a salient cost. The formation of such non-monospecific diabodies requires the successful assembly of two or more distinct and different polypeptides (i.e., such formation requires that the diabodies be formed through the heterodimerization of different polypeptide chain species). This fact is in contrast to mono-specific diabodies, which are formed through the homodimerization of identical polypeptide chains. Because at least two dissimilar polypeptides (i.e., two polypeptide species) must be provided in order to form a nonmonospecific diabody, and because homodimerization of such polypeptides leads to inactive molécules (Takemura, S. et al. (2000) “Construction Of A Diabody (Small Recombinant Bispecific Antibody) Using A Refolding System, Protein Eng. 13(8):583-588), the production of such polypeptides must be accomplished in such a way as to prevent covalent bonding between polypeptides of the same species (i.e., so as to prevent homodimerization) (Takemura, S. et al. (2000) “Construction Of A Diabody (Small Recombinant Bispecific Antibody) Using A Refolding System, Protein Eng. 13(8):583-588). The art has therefore taught the non-covalent
association of such polypeptides (see, e.g., Olafsen et al. (2004) “Covalent DisulfideLinked Anti-CEA Diabody Allows Site-Specific Conjugation And Radiolabeling For Tumor Targeting Applications,” Prot. Engr. Des. Sel. 17:21-27; Asano et al. (2004) “A Diabody For Cancer Immunotherapy And Its Functional Enhancement By Fusion Of Human Fc Domain,” Abstract 3P-683, J. Biochem. 76(8):992; Takemura, S. et al. (2000) “Construction Of A Diabody (Small Recombinant Bispecific Antibody) Using A Refolding System,” Protein Eng. 13(8):583-588; Lu, D. et al. (2005) “A Fully Human Recombinant IgG-Like Bispecific Antibody To Both The Epidermal Growth Factor Receptor And The Insulin-Like Growth Factor Receptor For Enhanced Antitumor Activity,” J. Biol. Chem. 280(20):19665-19672).
[0019] However, the art has recogriized that bi-speciftc diabodies composed of noncovalently associated polypeptides are unstable and readily dissociate into nonfunctional monomers (scc, e.g., Lu, D. et al. (2005) “A Fully Human Recombinant IgG-Like Bispecific Antibody To Both The Epidermal Growth Factor Receptor And The Insulin-Like Growth Factor Receptor For Enhanced Antitumor Activity,” J. Biol. Chem. 280(20):19665-19672).
[0020] In the face of this challenge, the art has succeeded in developing stable, covalently bonded heterodimeric non-monospecific diabodies (see, e.g., WO 2006/113665; WO/2008/157379; WO 2010/080538; WO 2012/018687;
WO/2012/162068; Johnson, S. et al. (2010) “Effector Cell Recruitment With Novel Fv-Based Dual-Affinity Re-Targeting Protein Leads To Patent Tumor Cytolysis And In Vivo B-Cell Déplétion,” J. Molec. Biol. 399(3):436-449; Veri, M.C. et al. (2010) “Therapeutic Control Of B Cell Activation Via Recruitment Of Fcgamma Receptor Ilb (CD32B) Inhibitory Function With A Novel Bispecific Antibody Scaffold,” Arthritis Rheum. 62(7):1933-1943; Moore, P.A. et al. (2011) “Application Of Dual Affinity Retargeting Molécules To Achieve Optimal Redirected T-Cell Killing Of B-Cell Lymphoma,” Blood 117(17):4542-4551). Such approaches involve engineering one or more cysteine residues into each of the employed polypeptide species. For example, the addition of a cysteine residue to the C-terminus of such constructs has been shown to allow disulfîde bonding between the polypeptide chains, stabilizing the
-920146 resulting heterodimer without interfering with the binding characteristics of the bivalent molécule.
[0021| Notwithstanding such success, the production of stable, functional heterodimeric, non-monospccifîc diabodies can bc further optimized by the carcful considération and placement of cysteine residues in one or more of the employed polypeptide chains. Such optimized diabodies can be produced in higher yield and with greater activity than non-optimized diabodies. The présent invention is thus directed to the problem of providing polypeptides that are particularly designed and optimized to form heterodimeric diabodies. The invention solves this problem through the provision of exemplary, optimized CD 123 x CD3 diabodies.
Summary of the Invention:
[0022] The présent invention is directed to CD 123 X CD3 bi-specific diabodies that are capable of simultaneous binding to CD 123 and CD3, and to the uses of such molécules in the treatment of disease, in particular hématologie malignancies.
[0023] The CD 123 x CD3 bi-specific diabodies of the invention comprise at least two different polypeptide chains that associate with one another in a heterodimeric manner to form one binding site spécifie for an epitope of CD 123 and one binding site spécifie for an epitope of CD3. A CD 123 x CD3 diabody of the invention is thus monovalent in that it is capable of binding to only one copy of an epitope of CD 123 and to only one copy of an epitope of CD3, but bi-specific in that a single diabody is able to bind simultaneously to the epitope of CD 123 and to the epitope of CD3. The individual polypeptide chains of the diabodies are covalently bonded to one another, for example by disulfide bonding of cysteine residues located within each polypeptide chain. In particular embodiments, the diabodies of the présent invention further hâve an immunoglobulin Fc Domain or an Albumin-Binding Domain to extend half-life in vivo.
[0024] In detail, the invention also provides a sequence-optimized CD 123 x CD3 bispecific monovalent diabody capable of spécifie binding to an epitope of CD 123 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, wherein:
- 10H 1 : ' i L
A. the first polypeptide chain comprises, in the N-tenninal to C-temiinal direction:
i. a Domain 1, comprising:
(1) a sub-Domain (IA), which comprises a VL Domain of a monoclonal antibody capable of binding to CD3 (VLcds) (SEQ ID NO:21); and (2) a sub-Domain (IB), which comprises a VH Domain of a monoclonal antibody capable of binding to CD 123 (VHcdiîî) (SEQ ID NO:26);
whe rein the sub-Domains IA and IB are separated from one another by a peptide linker (SEQ ID NO:29);
ii. a Domain 2, wherein the Domain 2 is an E-coil Domain (SEQ ID NO:34) or a K-coil Domain (SEQ ID NO:35), wherein the Domain 2 is separated from the Domain 1 by a peptide linker (SEQ ID NO:30); and
B. the second polypeptide chain comprises, in the N-terminal to C-terminal direction:
i. a Domain 1, comprising:
(1) a sub-Domain (IA), which comprises a VL Domain of a monoclonal antibody capable of binding to CD123 (VLCD123) (SEQ ID NO:25); and (2) a sub-Domain (IB), which comprises a VH Domain of a monoclonal antibody capable of binding to CD3 (VHcdî) (SEQ ID NO:22);
whe rein the sub-Domains IA and IB are separated from one another by a peptide linker (SEQ ID NO:29);
ii. a Domain 2, wherein the Domain 2 is a K-coil Domain (SEQ ID NO:35) or an E-coil Domain (SEQ ID NO:34), wherein the Domain 2 is separated from the Domain 1 by a peptide linker (SEQ ID NO:30); and wherein the Domain 2 of the first and the second polypeptide chains are not both E-coil Domains or both K-coil Domains;
and wherein:
(a) said VL Domain of said first polypeptide chain and said VH Domain of said second polypeptide chain form an Antigen Binding Domain capable of specifically binding to an epitope of CD3; and (b) said VL Domain of said second polypeptide chain and said VH Domain of said first polypeptide chain form an Antigen Binding Domain capable of specifically binding to an epitope of CD 123.
[0025] The invention also provides a non-sequence-optimized CD 123 x CD3 bispecific monovalent diabody capable of spécifie binding to an epitope of CD 123 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, wherein:
A. the first polypeptide chain comprises, in the N-terminal to C-terminal direction:
i. a Domain 1, comprising:
(1) a sub-Domain (IA), which comprises a VL Domain of a monoclonal antibody capable of binding to CD3 (VLcdî) (SEQ ID NO:23); and (2) a sub-Domain (IB), which comprises a VH Domain of a monoclonal antibody capable of binding to CD 123 (VHcdiz.O (SEQ ID NO:28);
whe rein the sub-Domains IA and IB are separated from one another by a peptide linker (SEQ ID NO:29);
ii. a Domain 2, wherein the Domain 2 is an E-coil Domain (SEQ ID NO:34) or a K-coil Domain (SEQ ID NO:35), wherein the Domain 2 is separated from the Domain 1 by a peptide linker (SEQ ID NO:30); and
B. the second polypeptide chain comprises, in the N-terminal to C-terminal direction:
i. a Domain 1, comprising:
(1) a sub-Domain (IA), which comprises a VL Domain of a monoclonal antibody capable of binding to CD123 (VLCDi23) (SEQ ID NO:27); and
- 1220146 (2) a sub-Domain (IB), which comprises a VH Domain of a monoclonal antibody capable of binding to CD3 (VHcd?) (SEQ ID NO:24);
whe rein the sub-Domains IA and IB are separated from one another by a peptide linker (SEQ ID NO:29);
ii. a Domain 2, wherein the Domain 2 is a K-coil Domain (SEQ ID NO:35) or an E-coil Domain (SEQ ID NO:34), wherein the Domain 2 is separated from the Domain 1 by a peptide linker (SEQ ID NO:30); and wherein the Domain 2 of the first and the second polypeptide chains are not both E-coil Domains or both K-coil Domains and wherein:
(a) said VL Domain of said first polypeptide chain and said VH Domain of said second polypeptide chain form an Antigen Binding Domain capable of specifïcally binding to an epitope of CD3; and (b) said VL Domain of said second polypeptide chain and said VH Domain of said first polypeptide chain form an Antigen Binding Domain capable of specifïcally binding to an epitope of CD123.
[0026] The invention additionally provides the embodiment of the above-described bi-specifîc monovalent diabodies, wherein the first or second polypeptide chain additionally comprises an Albumin-Binding Domain (SEQ ID NO:36) linked, Cterminally to Domain 2 or N-terminally to Domain I, via a peptide linker (SEQ ID NO:31).
[0027] The invention additionally provides the embodiment of the abovc-dcscribcd bi-specific monovalent diabodies wherein the first or second polypeptide chain additionally comprises a Domain 3 comprising a CH2 and CH3 Domain of an immunoglobulin IgG Fc Domain (SEQ ID NO:37), wherein the Domain 3 is linked, N-terminally, to the Domain 1A via a peptide linker (SEQ ID NO:33).
[0028] The invention additionally provides the embodiment of the above-described bi-specific monovalent diabodies wherein the first or second polypeptide chain additionally comprises a Domain 3 comprising a CH2 and CH3 Domain of an
- 13 20146 immunoglobulin IgG Fc Domain (SEQ ID NO:37), wherein the Domain 3 is linked, C-terminally, to the Domain 2 via a peptide linker (SEQ ID NO:32).
[0029] The invention additionally provides the embodiment of any of the abovedescribcd bi-spccific monovalent diabodics wherein the Domain 2 of the first polypeptide chain is a K-coil Domain (SEQ ID NO:35) and the Domain 2 of the second polypeptide chain is an E-coil Domain (SEQ ID NO:34).
[0030] The invention additionally provides the embodiment of any of the abovedescribed bi-specific monovalent diabodies wherein the Domain 2 of the first polypeptide chain is an E-coil Domain (SEQ ID NO:34) and the Domain 2 of the second polypeptide chain is a K-coil Domain (SEQ ID NO:35).
[0031] The invention additionally provides the embodiment of a bi-specific monovalent diabody capable of spécifie binding to an epitope of CD 123 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, wherein: said bi-specific diabody comprises:
A. a first polypeptide chain having the amino acid sequence of SEQ ID NO:1; and
B. a second polypeptide chain having the amino acid sequence of SEQ ID NO:3;
wherein said first and said second polypeptide chains arc covalently bonded to one another by a disulfide bond.
[0032] The diabodies of the invention exhibit unexpectedly enhanced functional activities as further described below.
[0033] The diabodics of the invention arc prcfcrably capable of cross-rcacting with both human and primate CD 123 and CD3 proteins, preferably cynomolgus monkey CD 123 and CD3 proteins.
[0034] The diabodies of the invention are preferably capable of depleting, in an in vitro cell-based assay, plasmacytoid dendritic cells (pDC) from a culture of primary PBMCs with an IC50 of about 1 ng/ml or less, about 0.8 ng/ml or less, about 0.6
- 1420146 ng/ml or less, about 0.4 ng/ml or less, about 0.2 ng/ml or less, about 0.1 ng/ml or less, about 0.05 ng/ml or less, about 0.04 ng/ml or less, about 0.03 ng/ml or less, about 0.02 ng/ml or less or about O.Olng/ml or less. Preferably, the IC50 is about 0.01 ng/ml or less. In the above-described assay, the culture of primary PBMCs may be from cynomolgus monkey in which case said déplétion is of cynomolgus monkey plasmacytoid dendritic cells (pDC). Optionally the diabodies of the invention may be capable of depleting plasmacytoid dendritic cells (pDC) from a primary culture of PBMCs as described above wherein the assay is conducted by or in accordance with the protocol of Example 14, as herein described, or by modification of such assay as would be understood by those of ordinary skiil, or by other means known to those of ordinary skiil.
[0035] The diabodies of the invention preferably exhibit cytotoxicity in an in vitro Kasumi-3 assay with an EC50 of about 0.05 ng/mL or less. Preferably, the EC50 is about 0.04 ng/mL or less, about 0.03 ng/mL or less, about 0.02 ng/mL or less, or about 0.01 ng/mL or less. Optionally the diabodies of the invention may exhibit cytotoxicity as described above wherein the assay is conductcd by or in accordance with the protocol of Example 3 as herein described, or by modification of such assay as would be understood by those of ordinary skiil, or by other means known to those of ordinary skiil.
[0036] The diabodies of the invention preferably exhibit cytotoxicity in an in vitro Molm-13 assay with an EC50 of about 5 ng/mL or less. Preferably, the EC50 is about 3 ng/mL or less, about 2 ng/mL or less, about 1 ng/mL or less, about 0.75 ng/mL or less, or about 0.2 ng/rnL or less. Optionally the diabodies of the invention may exhibit cytotoxicity as described above wherein the assay is conducted by or in accordance with the protocol of Example 3 as herein described, or by modification of such assay as would be understood by those of ordinary skiil, or by other means known to those of ordinary skiil.
[0037] The diabodies of the invention are preferably capable of inhibiting the growth of a MOLM-13 tumor xenograft in a mouse. Preferably the diabodies of the invention may be capable of inhibiting the growth of a MOLM-13 tumor xenograft in li I : j .
a mouse at a concentration of at least about 20 pg/kg, at least about 4 pg/kg, at least about 0.8 pg/kg, at least about 0.6 pg/kg or at least about 0.4 pg/kg. Preferred antibodies of the invention will inhibit growth of a MOLM-13 tumor xenograft in a mouse by at least 25%, but possibly by at least about 40% or more, by at least about 50% or more, by at least about 60% or more, by at least about 70% or more, by at least about 80% or more, by at least about 90% or more, or even by completely inhibiting MOLM-13 tumor growth after some period of time or by causing tumor régression or disappearance. This inhibition will take place for at least an NSG mouse strain. Optionally, the diabodies of the invention may be capable of inhibiting the growth of a MOLM-13 tumor xenograft in a mouse in the above-described mamier by or in accordance with the protocol of Example 6 as herein described, or by modification of such assay as would be understood by those of ordinary skill, or by other means known to those of ordinary skill.
[0038] The diabodies of the invention are preferably capable of inhibiting the growth of an RS4-11 tumor xenograft in a mouse. Preferably the diabodies of the invention may be capable of inhibiting the growth of a RS4-11 tumor xenograft in a mouse at a concentration of at least about 0.5 mg/kg, at least about 0.2 mg/kg, at least about 0.1 mg/kg, at least about 0.02 mg/kg or at least about 0.004 mg/kg. Preferred antibodies of the invention will inhibit grow'th of a RS4-11 tumor xenograft in a mouse by at least about 25%, but possibly at least about 40%, at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90%, or even by completely inhibiting RS4-11 tumor growth after some period of time or by causing tumor régression or disappearance. This inhibition will take place for at least an NSG mouse strain. Optionally, the diabodies of the invention may be capable of inhibiting the growth of a RS4-11 tumor xenograft in a mouse in the above-described manner by or in accordance with the protocol of Example 6 as herein described, or by modification of such assay as would be understood by those of ordinary skill, or by other means known to those of ordinary skill.
[0039] The diabodies of the invention are preferably capable of depleting leukemic blast cells in vitro in a primary culture of AML bone marrow cells. Preferably the diabodies of the invention may be capable of depleting leukemic blast cells in vitro in
- 1620146 a primary culture of AML bone marrow cells at concentrations of at least about 0.01 ng/ml, at least about 0.02 ng/ml, at least about 0.04 ng/ml, at least about 0.06 ng/ml, at least about 0.08 ng/ml or at least about 0.1 ng/ml. Preferably, the diabodies of the invention may be capable of depleting leukemic blast cells in vitro in a primary culture of AML bone marrow cells to less than 20% of the total population of primary leukemic blast cells at diabody concentrations of at least about 0.01 ng/ml, at least about 0.02 ng/ml, at least about 0.04 ng/ml, at least about 0.06 ng/ml, at least about 0.08 ng/ml or at least about 0.1 ng/ml, optionally following incubation of the primary culture with diabody for about 120 hours. Preferably leukemic blast cells are depleted in vitro in a primary culture of AML bone marrow cells to less than 20% of the total population of primary leukemic blast cells at diabody concentrations of about 0.01 ng/ml or 0.1 ng/ml following incubation of the primary culture with diabody for about 120 hours.
[0040] The diabodies of the invention are preferably capable of inducing an expansion of a T cell population in vitro in a primary culture of AML bone marrow cells. Preferably, such expansion may bc to about 70% or more of the maximum T cell population which can be expanded in the assay. Preferably the diabodies of the invention may be capable of inducing an expansion of a T cell population in vitro in a primary culture of AML bone marrow cells to about 70% or more of the maximum T cell population which can be expanded in the assay at diabody concentrations of at least about 0.01 ng/ml, at least about 0.02 ng/ml, at least about 0.04 ng/ml, at least about 0.06 ng/ml, at least about 0.08 ng/ml or at least about 0.1 ng/ml, optionally following incubation of the primary culture with diabody for about 120 hours. Preferably, a T cell population is expanded in vitro in a primary culture of AML bone marrow cells to about 70% or more of the maximum T cell population which can be expanded in the assay at diabody concentrations of about 0.01 ng/ml or about 0.1 ng/ml following incubation of the primary culture with diabody for about 120 hours.
[0041] The diabodies of the invention are preferably capable of inducing an activation of a T cell population in vitro in a primary culture of AML bone marrow cells. Such activation may occur at diabody concentrations of at least about 0.01 ng/ml, at least about 0.02 ng/ml, at least about 0.04 ng/ml, at least about 0.06 ng/ml,
- 1720146 at least about 0.08 ng/ml or at least about 0.1 ng/ml, optionally following incubation of the primary culture with diabody for about 72 hours. Such activation may be measured by the expression of a T cell activation marker such as CD25. Preferably, activation of a T cell population in vitro in a primary culture of AML bone marrow cells as measured by expression of CD25 may occur at diabody concentrations of about 0.01 ng/ml or about 0.1 ng/ml following incubation of the primary culture with diabody for about 72 hours.
[0042] The diabodies of the invention are preferably capable of depleting leukemic blast cells in vitro in a primary culture of AML bone marrow cells to less than 20% of the total population of primary leukemic blast cells and at the same time inducing an expansion of the T cell population in vitro in the primary culture of AML bone marrow cells to about 70% or more of the maximum T cell population which can be expanded in the assay at diabody concentrations of at least about 0.01 ng/ml, at least about 0.02 ng/ml, at least about 0.04 ng/ml, at least about 0.06 ng/ml, at least about 0.08 ng/ml or at least about 0.1 ng/ml, optionally following incubation of the primary culture with diabody for about 120 hours. Preferably, the diabody concentrations arc about 0.01 ng/ml or about 0.1 ng/ml and the primary culture is incubated with diabody for about 120 hours.
|0043] The diabodies of the invention may be capable of depleting leukemic blast cells in vitro in a primary culture of AML bone marrow cells and/or inducing an expansion of a T cell population in vitro in a primary culture of AML bone marrow cells and/or inducing an activation of a T cell population in vitro in a primary culture of AML bone marrow cells in the abovc-dcscribed manner by or in accordance with the protocol of Example 8 as herein described, or by modification of such assay as would be understood by those of ordinary skill, or by other means known to those of ordinary skill.
[0044] For the avoidance of any doubt, the diabodies of the invention may exhibit one, two, three, more than three or ail of the functional attributes described herein. Thus the diabodies of the invention may exhibit any combination of the functional attributes described herein.
- 1820146
[0045] The diabodies of the invention may be for use as a pharmaceutical. Preferably, the diabodies are for use in the treatment of a disease or condition associated with or characterized by the expression of CD 123. The invention also relates to the use of diabodies of the invention in the manufacture of a pharmaceutical composition, preferably for the treatment of a disease or condition associated with or characterized by the expression of CD 123 as further defined herein.
[0046] The disease or condition associated with or characterized by the expression of CD 123 may be cancer. For example, the cancer may be selected from the group consisting of: acute myeloid leukemia (AML), chronic myelogenous leukemia (CML), including blastic crisis of CML and Abelson oncogene associated with CML (Bcr-ABL translocation), myelodysplastic syndrome (MDS), acute B lymphoblastic leukemia (B-ALL), chronic lymphocytic leukemia (CLL), including Richter’s syndrome or Richter’s transformation of CLL, hairy cell leukemia (HCL), blastic plasmacytoid dendritic cell neoplasm (BPDCN), non-Hodgkin lymphomas (NHL), including mantel cell leukemia (MCL), and small lymphocytic lymphoma (SLL), Hodgkin’s lymphoma, systemic mastocytosis, and Burkitt’s lymphoma.
[0047] The disease or condition associated with or characterized by the expression of CD 123 may be an inflammatory condition. For example, the inflammatory condition may be selected from the group consisting of: Autoimmune Lupus (SLE), allergy, asthma and rheumatoid arthritis.
[0048] The invention additionally provides a pharmaceutical composition comprising any of the above-described diabodies and a physiologically acceptable carrier.
[0049] The invention additionally provides a use of the above-described pharmaceutical composition in the treatment of a disease or condition associated with or characterized by the expression of CD 123.
[0050] The invention is particularly directed to the embodiment of such use, wherein the disease or condition associated with or characterized by the expression of CD 123 is cancer (especially a cancer selected from the group consisting of: acute myeloid leukemia (AML), chronic myelogenous leukemia (CML), including blastic
- 1920146 crisis of CML and Abelson oncogene associated with CML (Bcr-ABL translocation), myelodysplastic syndrome (MDS), acute B lymphoblastic leukemia (B-ALL), chronic lymphocytic leukemia (CLL), including Richter’s syndrome or Richter’s transformation of CLL, hairy cell leukemia (HCL), blastic plasmacytoid dendritic cell neoplasm (BPDCN), non-Hodgkin lymphomas (NHL), including mantel cell leukemia (MCL), and small lymphocytic lymphoma (SLL), Hodgkin’s lymphoma, systemic mastocytosis, and Burkitt’s lymphoma).
[0051] The invention is also particularly directed to the embodiment of such use, wherein the disease or condition associated with or characterized by the expression of CD 123 is an inflammatory condition (espccially an inflammatory condition selected from the group consisting of: Autoimmune Lupus (SLE), allergy, asthma, and rheumatoid arthritis).
[0052] Terms such as “about” should be taken to mean within 10%, more preferably within 5%, of the specified value, unless the context requires otherwise.
Brief Description of the Drawings:
[0053] Figure 1 shows that CD 123 was known to be expressed on leukemic stem cells.
[0054] Figure 2 illustrâtes the structures of the first and second polypeptide chains of a two chain CD 123 x CD3 bi-specific monovalent diabody of the présent invention.
[0055] Figures 3A and 3B illustrate the structures of two versions of the first, second and third polypeptide chains of a three chain CD 123 x CD3 bi-spccific monovalent Fc diabody of the présent invention (Version 1, Figure 3A; Version 2, Figure 3B).
[0056] Figure 4 (Panels A-E) shows the ability of different CD 123 x CD3 bispecific diabodies to médiate T cell redirected killing of target cells displaying varying amount of CD123. The Figure provides dose-response curves indicating that the sequence-optimized CD123 x CD3 bi-specific diabody (“DART-A”) having an Albumin-Binding Domain (DART-A with ABD “w/ABD”) exhibited greater
-2020146 cytotoxicity than a control bi-specific diabody (Control DART) or a non-sequenceoptimized CD123 X CD3 bi-specific diabody (“DART-B”) in multiple target cell types: RS4-11 (Panel A); TF-1 (Panel B); Molm-13 (Panel C); Kasumi-3 (Panel D); and THP-1 (Panel E) at an E:T (effector : target) ratio of 10:1.
[0057] Figure 5 (Panels A-D) shows the ability of the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A), sequence-optimized CD 123 x CD3 bi-specific diabody having an Albumin-Binding Domain (DART-A with ABD “w/ABD”) and sequence-optimized CD 123 X CD3 bi-specific diabody having an immunoglobulin IgG Fc Domain (DART-A with Fc “w/Fc”) to médiate T cell activation during redirected killing of target cells. The Figure présents dose-response curves showing the cytotoxicity mediated by DART-A, DART-A w/ABD and DART-A w/Fc in Kasumi-3 (Panel A) and THP-1 (Panel B) cells and purified CD8 T cells at an E:T (effector cell : target cell) ratio of 10:1 (18 hour incubation). Panels C and D show dose-response curves of T cell activation using the marker CD25 on CD8 T cells in the presence (Panel D) and absence (Panel C) of target cells.
[0058] Figure 6 (Panels A-B) shows Granzyme B and Perforin levels in CD4 and CD8 T cells after treatment with the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) (Panel A) or a control bi-specific diabody (Control DART) (Panel B) in the presence of Kasumi-3 target cells and resting T cells at an E:T ratio of 10:1.
[0059] Figure 7 (Panels A-B) shows the in vivo antitumor activity of the sequenceoptimized CD123 X CD3 bi-specific diabody (DART-A) at nanogram per kilogram dosing levels. MOLM-13 cells (intermediate CD 123 expression) were co-mixcd with T cells and implanted subcutaneously (T:E 1:1) in NSG mice. Intravenous treatment was once daily for 8 days (QDx8) starting at implantation. Various concentrations of DART-A were compared to a control bi-specific diabody (Control DART). Panel A shows the Molm-13 cells alone or with T cells, and the effect of various doses of DART-A on tumor volume even to times beyond 30 days. Panel B shows the effect of increasing doses of DART-A on tumor volume seen in NSG mice receiving MOLM-13 cells and T cells (T:E 1:1) for atime course of 0-18 days.
-21 20146
[0060] Figure 8 shows the in vivo antitumor activity of the sequence-optimized CD!23 x CD3 bi-specific diabody (DART-A) on RS4-11 cells (ALL with monocytic features). Cells were co-mixed with T cells and implanted subcutaneously (T:E 1:1) in NSG mice. Intravenous treatment was once daily for 4 days (QDx4) starting at implantation. Various concentrations of DART-A were compared to a control bispecific diabody (Control DART).
[0061] Figure 9 (Panels A-B) shows CD 123+ blasts in bone marrow mononuclcocytes (BM MNC) and peripheral blood mononucleocytes (PBMCs) from AML patient 1 (Panel A) compared to Kasumi-3 AML cell line (Panel B).
[0062] Figure 10 (Panels A-C) shows the ability of the sequence-optimized CD123 x CD3 bi-specific diabody (DART-A) to médiate blast réduction in primary AML at 120h (Panel A), drive T cell expansion in primary AML at 120h (Panel B) and induce T cell activation in AML at 48h and 72 h (Panel C).
[0063] Figure 11 (Panels A-H) shows the identification of the CD123+ blast population in a primary sample of ALL PBMCs. Panels A and E show the forward and side scatter of the input population of normal PBMC (Panel A) and ALL PBMCs (Panel E). Panels B and F show the identification of the lymphocyte population as primarily B cells (Panel B) and leukemic blast cells (Panel F). Panels C and G show identification of the population of lymphocytes that are CD123+. Panels D and H show the identification of CD 19+ cells and CD 123+ cells.
[0064] Figure 12 (Panels A-B) shows the identification of the CD4 and CD8 populations of T cells in a primary sample of ALL PBMCs. Panel A shows the forward and side scatter of the input ALL PBMCs. Panel B shows the CD4 or CD8 populations of T cells présent in the samples. The numbers indicate that CD4 T cells represent approximately 0.5% of the total cells and CD8 T cells represent approximately 0.4% of the total cells présent in the ALL PBMC sample.
[0065] Figure 13 (Panels A-H) shows the ability of the sequence-optimized CD123 x CD3 bi-specific diabody (DART-A) to médiate ALL blast déplétion with autologous CTL. Panels A and E show the forward and side scatter of the input
-22J H' population of normal PBMC (Panel A) and ALL PBMCs (Panel E). The PBMCs were untreated (Panels B and F), treated with a control bi-specific diabody (Control DART) (Panels C and G) or treated with DART-A (Panels D and H) and incubated for 7 days followed by staining for CD34 and CD 19.
[0066] Figure 14 (Panels A-L) shows the ability of the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) to médiate T cell expansion (Panels A, B, C, G, H and I) and activation (Panels D, E, F, J, K and L) in normal PBMC (Panels AF) and ALL PBMC (Panels G-L). The cells were untreated (Panels A, D, G and J), or treated with a control bi-specific diabody (Control DART) (Panels B, E, H and K) or DART-A (Panels C, F, I and L) for 7 days.
[0067] Figure 15 (Panels A-C) shows the identification of the AML blast population and T cells in a primary AML sample. Panel A shows the forward and side scatter of the input AML PBMCs. Panel B shows the identification of the AML blast population in the AML sample. Panel C shows the identification of the T cell population in the AML sample.
[0068] Figure 16 (Panels A-C) shows the ability of the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) to médiate AML blast dcplction with autologous CTL and T cell expansion. Primary AML PBMCs from patient 2 were incubated with PBS, a control bi-specific diabody (Control DART) or DART-A for 14411. Blast cells (Panel A), CD4 T cells (Panel B) and CD8 T cells (Panel C) were counted.
[0069] Figure 17 (Panels A-D) shows the ability of the sequence-optimized CD 123 X CD3 bi-specific diabody (DART-A) to médiate T cell activation in AML. CD25 (Panel A) and Ki-67 (Panel B) expression was determined for the CD4 and CD8 T cells from AML patient 2 following incubation with a control bi-specific diabody (Control DART) or DART-A with autologous PBMCs. The level of perforin (Panel C) and granzyme B (Panel D) was determined for the CD4 and CD8 T cells from AML patient 2 following incubation with Control DART or DART-A with autologous PBMCs.
-231
[0070] Figure 18 (Panels A-D) shows that the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) is capable of cross-reacting with both human and primate CD 123 and CD3 proteins. The panels show BIACORE1M sensogram traces of the results of analyses conducted to assess the ability of DART-A to bind to human (Panels A and C) and non-human primate (Panels B and D) CD3 (Panels A and B) and CD123 (Panels C and D) proteins. The KD values are provided.
[0071] Figure 19 (Panels A-B) shows the ability of the sequence-optimized CD123 x CD3 bi-specific diabody (DART-A) to médiate autologous monocyte dcpletion in vitro with human and cynomolgus monkey PBMCs. The Panels présent the results of dose-response curves of DART-A-mediated cytotoxicity with primary human PBMCs (Panel A) or cynomolgus monkey PBMCs (Panel B).
[0072] Figure 20 (Panels A-N) shows the ability of the sequence-optimized CDI23 x CD3 bi-specific diabody (DART-A) to médiate the déplétion of pDC in cynomolgus monkeys without systemic cytokine induction. Panels A-D show control results obtained at 4h and 4d with vehicle and carrier. Panels E-H show control results obtained at 4h and 4d with a control bi-specific diabody (Control DART). Panels I-N show results obtained at 4h and 4d at 10 ng/kg/d and at 4d with 30 ng/kg/d of DARTA.
[0073] Figure 21 (Panels A-D) shows the ability of the sequence-optimized CDI 23 x CD3 bi-specific diabody (DART-A) to médiate dose-dependent déplétion of pDC in cynomolgus monkeys. Cynomolgus monkeys were dosed with DART-A at 0.1, 1, 10, 30 100, 300, or 1000 ng/kg. PBMCs were evaluated at the indicated time and total B cells (Panel A), monocytes (Panel B), NK cells (Panel C) and pDC (Panel D) were counted.
[0074] Figure 22 (Panels A-D) shows the ability of the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) to intermittently modulate T cells in cynomolgus monkeys. Cynomolgus monkeys were dosed with DART-A at at 0.1, 1, 10, 30 100, 300, or 1000 ng/kg. PBMCs were evaluated at the indicated time and total T cells (Panel A), CD4 T cells (Panel B), CD69 cells (Panel C) and CD8 T cells (Panel D) were counted.
-2420146
[0075] Figure 23 shows the SDS-PAGE analysis of purified DART-A protein under reducing (left) and non-reducing (right) conditions.
[0076] Figures 24A-24B show the physicochemical characterization of purified DART-A. Figure 24A; SEC profile of DART-A protein on a calibrated TSK G3000SWxL column. Figure 24B: Mass spectrum of DART-A protein.
[0077] Figures 25A-25D show SPR analysis of DART-A binding to immobilized human or cynomolgus monkey CD 123 and CD3. Dashed lines represent the global fit to a 1:1 Langmuir model of the experimental binding curves obtained at DART-A concentrations of 0, 6.25, 12.5, 25, 50 or lOOnM (continuons lines). The data are représentative of three independent experiments.
[0078] Figures 26A-26E show that DART-A was capable of simultancously binding both CD3 and CD123. Figure 26A-26B provides the results of a bifunctional ELISA and demonstrates simultaneous engagement of both target antigens of DARTA. ELISA plates were coated with human CD123 (Figure 26A) or cynomolgus monkey CD 123 (Figure 26B). Titrating DART-A and Control DART concentrations were followed by détection with human CD3-biotin. Figures 26C-26E demonstrate cell-surfacc binding of DART-A on CD123+ Molm-13 target cell (Figure 26C), human T cells (Figure 26D) and cynomolgus T cells (Figure 26E). Binding was detected by FACS analysis using a monoclonal antibody spécifie to E-coil and K-coil région of the DART-A or Control DART molécule.
[0079] Figures 27A-27H show the ability of DART-A to médiate redirected target cell killing by human or monkey effector cells against CD 123+ Kasumi-3 leukemic cell lines, demonstrate the ability of the molécules to bind to subsets of normal circulating leukocytes, including pDCs and monocytes and demonstrate the ability of the molécules to deplete CD 14 CD123h‘sh cells (pDC and basophils) without affecting monocytes (CD14+ cells). Figure 27A shows the relative anti-CD123-PE binding sites on U937 and Kasumi-3 leukemic cell lines as determined by QFACS analysis. Figure 27B shows the relatively low percent cytotoxicity mediated by DART-A or Control DART on an AML cell line (U937 cells) which, as shown in Figure 27A hâve relatively few CD123 binding sites). Figure 27C shows the percent cytotoxicity
-2520146 mediated by DART-A or Control DART in the presence of purified human T cells (as effector cells) on an AML cell line (Kasumi-3 cells) which, as shown in Figure 27A hâve a substantial number of CD 123 binding sites. In Figures 27B-27C, the E:T ratio is 10:1. Figure 27D shows the percent cytotoxicity mediated by DART-A or Control DART in the presence of purified cynomolgus monkey PBMCs (as effector cells) on Kasumi-3 cells (the E:T ratio is 15:1), and demonstrates that DART-A can bind cynomolgus monkey T cells. Figure 27E shows the relative anti-CD123-PE binding sites on Kasumi-3 cells, human monocytes, human plasmacytoid dendritic cells (“pDC”), cynomolgus monkey monocytes and cynomolgus monkey plasmacytoid dendritic cells as determined by QFACS analysis. Figure 27F shows the ability of DART-A to deplete CD 14 CD123l° cells. Figure 27G shows the ability of DART-A to deplete human CD14 CD123Hl cells. Figure 27H shows the ability of DART-A to deplete cynomolgus monkey CD 14“ CD123H| cells. Cytotoxicity was determined by LDH release, with EC50 values determined using GraphPad PRISM® software.
[0080] Figure 28 shows the use of a two-compartment model to estimate pharmacokinctic parameters of DART-A. The data show the end of infusion (EOI) sérum concentrations of DART-A in cynomolgus monkeys after receiving a 96-hour infusion at 100 ng/kg/day 300 ng/kg/day, 600 ng/kg/day, and 1000 ng/kg/day Dose. Each point represents an individual animal; horizontal fines represent the mean value for the dose group.
[0081] Figures 29A-29C show the effect of DART-A infusions on the production of the cytokine, 1L-6. Sérum 1L-6 levels (mean ± SEM) in monkeys infused with DART-A arc shown by treatment group. Cynomolgus monkeys were treated with vehicle control on Day 1, followed by 4 weekly infusions of either vehicle (Group 1) (Figure 29A) or DART-A administered as 4-day weekly infusions starting on Days 8, 15, 22, and 29 (Groups 2-5) (Figure 29B) or as a 7-day/week infusion for 4 weeks starting on Days 8 (Group 6) (Figure 29C). Treatment intervals are indicated by the filled gray bars.
[0082] Figures 30A-30F show the effect of DART-A infusions on the déplétion of CD14-/CD123+ cells (Figures 30A-30C) and CD303+ cells (Figures 30D-30F). The
-2620146 mean ± SEM of the circulating levels of CD14-/CD123+ (Figures 30A-30C) or CD303+ (Figures 30D-30F) by Study Day and by group is shown. Cynomolgus monkeys were treated with vehicle control on Day 1, followed by 4 weekly infusions of either vehicle (Group 1) (Figures 30A and 30D) or DART-A administered as 4day weekly infusions starting on Days 8, 15, 22, and 29 (Groups 2-5) (Figures 30A and 30E) or as a 7-day/week infusion for 4 weeks starting on Days 8 (Group 6) (Figures 30C and 30F). Treatment intervals are indicated by the fïlled gray bars.
[0083] Figures 31A-31I show the observed changes in T cell populations (Figures 31A-31C), CD4+ cell populations (Figures 31D-31F) and CD8+ cell populations (Figures 31G-31I) receiving DART-A administered as 4-day infusions starting on Days 8, 15, 22, and 29. Legend: CD25+ (gray squares); CD69+ (gray triangles), PD1+ (white triangles); Tim-3+ (white squares). T cells were enumerated via the CD4 and CD8 markcrs, rathcr than the canonical CD3, to climinate possible interférence the DART-A. Cynomolgus monkeys were treated with vehicle control on Day 1, followed by 4 weekly infusions of either vehicle (Group 1) or DART-A administered as 4-day weekly infusions starting on Days 8, 15, 22, and 29 (Group 5) or as a 7day/week infusion for 4 weeks starting on Days 8 (Group 6). Treatment intervals are indicated by the fïlled gray bars. The mean ± SEM of the absolute number of total circulating T cells by Study Day and group is shown (Figures 31A-31C). Relative values (mean percent ± SEM) of CD25+, CD69+, PD-1+ and Tim-3+ of CD4 (Figures 31D-31E) or CD8 T cells (Figures 31F-31H) by Study Day and by group is shown.
[0084] Figures 32A-32F show the observed changes in T CD4+ cell populations (Figures 32A-32C) and CD8+ cell populations (Figures 32D-32F) during and after a continuous 7-day infusion of DART-A. The mean ± SEM percent of CD25+, CD69+, PD-1+ and Tim-3+ on CD4 (Figures 32A-32C) or CD8 (Figures 32D-32F) T cells by Study Day for Groups 2, 3 and 4 are shown. Treatment intervals are indicated by the fïlled gray bars. Legend: CD25+ (gray squares); CD69+ (gray triangles), PD-1+ (white triangles); Tim-3+ (white squares).
-27' ' s /
[0085] Figures 33A-33F show the observed changes in T CD4+ cell populations (Figures 33A-33C) and CD8+ cell populations (Figures 33D-33F) during and after a continuous 7-day infusion of DART-A. The mean ± SEM percent of CD4+ Naïve (CD95-/CD28+), CMT (CD95+/CD28+), and EMT (CD95+/CD28-) T cells in CD4+ population (Figures 33A-33C) or CD8 population (Figures 33D-33F) by Study Day for Groups 2, 3 and 4 are shown. Cynomolgus monkeys were treated with vehicle control on Day 1, followed by 4 weekly infusions of or DART-A administered as 4day weekly infusions starting on Days 8, 15, 22, and 29 (Groups 2-4). Treatment intervals are indicated by the filled gray bars. Legend: Naïve (white triangles); CMT (black triangles), EMT (gray squares).
Figure 34 shows DART-A-mediated cytotoxicity against Kasumi-3 cells with PBMCs from either naïve monkeys or monkeys treated with multiple infusions of DART-A.
[0086] Figures 35A-35F show that DART-A exposure increased the relative frequency of central memory CD4 cells and effector memory CD8+ cells at the expense of the corresponding naïve T cell population. The mean ± SEM percent of CD4+ Naïve (CD95-/CD28+), CMT (CD95+/CD28+), and EMT (CD95+/CD28-) T cells in CD4+ population (Figures 35A-35C) or in CD8+ population (Figures 35D35F) by Study Day and by Group is shown. Cynomolgus monkeys were treated with vehicle control on Day 1, followed by 4 weekly infusions of either vehicle (Group 1) or DART-A administered as 4-day weekly infusions starting on Days 8, 15, 22, and 29 (Group 5) or as a 7-day/week infusion for 4 weeks starting on Days 8 (Group 6). Treatment intervals arc indicated by the filled gray bars. Legend: Naïve (white triangles); CMT (black triangles), EMT (gray squares).
[0087] Figures 36A-36F show the effect of DART-A on red cell parameters in monkeys that had received infusions of the molécules. Circulating RBCs (Figures 36A-36C) or réticulocytes (Figures 36D-36F) levels (mean ± SEM) in samples collected at the indicated time points from monkeys treated with DART-A are shown.
[0088] Figures 37A-37B show that the frequency (mean percent ± SEM) of CD123+ cells (Figure 37A) or HSC (CD34+/CD38-/CD45-/CD90+ cells) (Figure
-28|| fl I- il : *' < t ' Y I
37B) within the Lin- cell population in bone marrow samples collected at the indicated time points from monkeys treated with DART-A. Cynomolgus monkeys were treated with vehicle control on Day 1, followed by 4 weekly infusions of either vehicle (Group 1) or DART-A administered as 4-day weekly infusions starting on Days 8, 15, 22, and 29 (Groups 2-5) or as a 7-day/week infusion for 4 weeks starting on Days 8 (Group 6).
Detailed Description of the Invention:
[0089] The présent invention is directed to sequence-optimized CD 123 x CD3 bispecifïc monovalent diabodies that are capable of simultaneous binding to CD 123 and CD3, and to the uses of such molécules in the treatment of hématologie malignancies. Although non-optimized CD 123 X CD3 bi-specific diabodies are fully functional, analogous to the improvements obtained in gene expression through codon optimization (see, e.g., Grosjean, H. et al. (1982) Preferential Codon Usage In Prokaryotic Genes: The Optimal Codon-Anticodon Interaction Energy And The Sélective Codon Usage In Efficiently Expressed Genes Gene 18(3):199-209), it is possible to further enhance the stability and/or function of CD 123 x CD3 bi-specific diabodies by modifying or refîning their sequences.
[0090] The preferred CD 123 x CD3 bi-specific diabodies of the présent invention are composed of at least two polypeptide chains that associatc with onc another to form one binding site spécifie for an epitope of CD 123 and one binding site spécifie for an epitope of CD3 (Figure 2). The individual polypeptide chains of the diabody are covalently bonded to one another, for example by disulfide bonding of cysteine residues located within each polypeptide chain. Each polypeptide chain contains an Antigen Binding Domain of a Light Chain Variable Domain, an Antigen Binding Domain of a Heavy Chain Variable Domain and a heterodimerization domain. An intervening linker peptide (Linker 1) séparâtes the Antigen Binding Domain of the Light Chain Variable Domain from the Antigen Binding Domain of the Heavy Chain Variable Domain. The Antigen Binding Domain of the Light Chain Variable Domain ofthe first polypeptide chain interacts with the Antigen Binding Domain ofthe Heavy Chain Variable Domain of the second polypeptide chain in order to form a first functional antigen binding site that is spécifie for the first antigen (i.e., either CD 123
-2920146 or CD3). Likewise, the Antigen Binding Domain of the Light Chain Variable Domain of the second polypeptide chain interacts with the Antigen Binding Domain of the Heavy Chain Variable Domain of the first polypeptide chain in order to form a second functional antigen binding site that is spécifie for the second antigen (i.e., either CD 123 or CD3, depending upon the identity of the first antigen). Thus, the sélection of the Antigen Binding Domain of the Light Chain Variable Domain and the Antigen Binding Domain of the Heavy Chain Variable Domain of the first and second polypeptide chains are coordinated, such that the two polypeptide chains collectively comprise Antigen Binding Domains of light and Heavy Chain Variable Domains capable of binding to CD 123 and CD3.
[0091] The formation of heterodimers of the first and second polypeptide chains can be driven by the heterodimerization domains. Such domains include GVEPKSC (SEQ ID NO:50) (or VEPKSC; SEQ ID NO:51) on one polypeptide chain and GFNRGEC (SEQ ID NO:52) (or FNRGEC; SEQ ID NO:53) on the other polypeptide chain (US2007/0004909). Alternatively, such domains can be engineered to contain coils of opposing charges. The heterodimerization domain of one of the polypeptide chains comprises a sequence of at least six, at least seven or at least eight positively charged amino acids, and the heterodimerization domain of the other of the polypeptide chains comprises a sequence of at least six, at least seven or at least eight negatively charged amino acids. For example, the first or the second heterodimerization domain will preferably comprise a sequence of eight positively charged amino acids and the other of the heterodimerization domains will preferably comprise a sequence of eight negatively charged amino acids. The positively charged amino acid may be lysine, arginine, histidine, etc. and/or the negatively charged amino acid may be glutamic acid, aspartic acid, etc. The positively charged amino acid is preferably lysine and/or the negatively charged amino acid is preferably glutamic acid.
[0092] The CD 123 x CD3 bi-specific diabodies of the présent invention are engineered so that such first and second polypeptide chains covalently bond to one another via cysteine residues along their length. Such cysteine residues may be introduced into the intervening linker that séparâtes the VL and VH domains of the polypeptides. Alternatively, and more preferably, a second peptide (Linker 2) is
- 3020146 introduced into each polypeptide chain, for example, at the amino-terminus of the polypeptide chains or a position that places Linker 2 between the heterodimerization domain and the Antigen Binding Domain of the Light Chain Variable Domain or Heavy Chain Variable Domain.
[0093] In particular embodiments, the sequence-optimized CD 123 x CD3 bi-specific monovalent diabodies of the présent invention further hâve an immunoglobulin Fc Domain or an Albumin-Binding Domain to extend half-life in vivo.
[0094] The CD 123 x CD3 bi-specific monovalent diabodies of the présent invention that comprise an immunoglobulin Fc Domain (i.e., CD123 X CD3 bi-specific monovalent Fc diabodies) are composed of a first polypeptide chain, a second polypeptide chain and a third polypeptide chain. The first and second polypeptide chains associate with one another to form one binding site spécifie for an epitope of CD 123 and one binding site spécifie for an epitope of CD3. The first polypeptide chain and the third polypeptide chain associate with one another to form an immunoglobulin Fc Domain (Figure 3A and Figure 3B). The first and second polypeptide chains of the bi-specific monovalent Fc diabody are covalently bonded to one another, for example by disulfîde bonding of cysteine residues located within each polypeptide chain.
[0095] The first and third polypeptide chains are covalently bonded to one another, for cxamplc by disulfîde bonding of cysteine residues located within each polypeptide chain. The first and second polypeptide chains each contain an Antigen Binding Domain of a Light Chain Variable Domain, an Antigen Binding Domain of a Heavy Chain Variable Domain and a heterodimerization domain. An intervening linker peptide (Linker 1) séparâtes the Antigen Binding Domain of the Light Chain Variable Domain from the Antigen Binding Domain of the Heavy Chain Variable Domain The Antigen Binding Domain of the Light Chain Variable Domain of the first polypeptide chain interacts with the Antigen Binding Domain of the Heavy Chain Variable Domain of the second polypeptide chain in order to form a first functional antigen binding site that is spécifie for the first antigen (Le., either CD 123 or CD3). Likewise, the Antigen Binding Domain of the Light Chain Variable Domain of the
second polypeptide chain interacts with the Antigen Binding Domain of the Heavy Chain Variable Domain of the first polypeptide chain in order to form a second functional antigen binding site that is spécifie for the second antigen (i.e., either CD3 or CD123, depending upon the identity of the first antigen). Thus, the sélection of the Antigen Binding Domain of the Light Chain Variable Domain and the Antigen Binding Domain of the Heavy Chain Variable Domain of the first and second polypeptide chains are coordinated, such that the two polypeptide chains collectively comprise Antigen Binding Domains of light and Heavy Chain Variable Domains capable of binding to CD123 and CD3. The first and third polypeptide chains each contain some or ail of the CH2 Domain and/or some or ail of the CH3 Domain of a complété immunoglobulin Fc Domain and a cysteine-containing peptide. The some or ail of the CH2 Domain and/or the some or ail of the CH3 Domain associate to form the immunoglobulin Fc Domain of the bi-specific monovalent Fc diabodies of the présent invention. The first and third polypeptide chains of the bi-specific monovalent Fc diabodies of the présent invention are covalently bonded to one another, for example by disulfide bonding of cysteine residues located within the cysteine-containing peptide of the polypeptide chains.
1. The Sequence-Optimized CD123 x CD3 Bi-Specific Diabody, “DART-A”
[0096] The invention provides a scquence-optimized bi-specific diabody capable of simultaneously and specifically binding to an epitope of CD 123 and to an epitope of CD3 (a “CD123 x CD3” bi-specific diabody or DART-A). As discussed below, DART-A was found to exhibit enhanced functional activity relative to other nonsequence-optimized CD 123 x CD3 bi-specific diabodies of similar composition, and is thus termed a “sequence-optimized” CD123 x CD3 bi-specific diabody.
[0097] The sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) comprises a first polypeptide chain and a second polypeptide chain. The first polypeptide chain of the bi-specific diabody will comprise, in the N-terminal to Cterminal direction, an N-terminus, a Light Chain Variable Domain (VL Domain) of a monoclonal antibody capable of binding to CD3 (VLCD3), an intervening linker peptide (Linker 1), a Heavy Chain Variable Domain (VH Domain) of a monoclonal
-32ί N . 1,1 i | t f î !
antibody capable of binding to CD123 (VHcdus), and a C-terminus. A preferred sequence for such a VLcd3 Domain is SEQ ID NO:21 :
QAVVTQEPSLTVSPGGTVTLTCRSSTGAVTTSNYANWVQQKPGQAPRGLIGG TNKRAPWTPARFSGSLLGGKAALTITGAQAEDEADYYCALWYSNLWVFGGGT KLTVLG
[0098] The Antigen Binding Domain of VLcds comprises CDR1 SEQ ID NO:38: RSSTGAVTTSNYAN, CDR2 SEQ ID NO:39: GTNKRAP, and CDR3 SEQ ID NO:40: ALWYSNLWV.
[0099] A preferred sequence for such Linker l is SEQ ID NO:29: GGGSGGGG. A preferred sequence for such a VHcdizs Domain is SEQ ID NO:26:
EVQLVQSGAELKKPGASVKVSCKASGYTFTDYYMKWVRQAPGQGLEWIGDII PSNGATFYNQKFKGRVTITVDKSTSTAYMELSSLRSEDTAVYYCARSHLLRA SWFAYWGQGTLVTVS S
[00100] The Antigen Binding Domain of νΗα)122 comprises CDR1 SEQ ID NO:47: DYYMK, CDR2 SEQ ID NO:48: DI IPSNGATFYNQKFKG, and CDR3 SEQ ID NO:49: SHLLRAS.
[00101] The second polypeptide chain will comprise, in the N-terminal to C-terminal direction, an N-terminus, a VL domain of a monoclonal antibody capable of binding to CD 123 (VLCdi23), an intervening linker peptide (e.g., Linker 1 ), a VH domain of a monoclonal antibody capable of binding to CD3 (VHCd3), and a C-terminus. A preferred sequence for such a VLCDi23 Domain is SEQ ID NO:25:
DFVMTQSPDSLAVSLGERVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKL LIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPYTF GQGTKLEIK
[00102] The Antigen Binding Domain of VLCdi23 comprises CDR1 SEQ ID NO:44: KSSQSLLNSGNQKNYLT, CDR2 SEQ ID NO:45: WASTRES, and CDR3 SEQ ID NO:46: QNDYSYPYT.
[00103] A preferred sequence for such a VHCd3 Domain is SEQ ID NO:22:
EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMNWVRQAPGKGLEWVGRIR SKYNNYATYYADSVKDRFTISRDDSKNSLYLQMNSLKTEDTAVYYCVRHGNF GN S YVSWFAYWGQGTLVTVS S
- 33 20146
[00104] The Antigen Binding Domain of VHcds comprises CDR1 SEQ ID NO:41: TYAMN, CDR2 SEQ ID NO:42: RIRSKYNNYATYYADSVKD, and CDR3 SEQ ID NO:43: HGNFGNSYVSWFAY.
[00105] The sequence-optimized CD 123 x CD3 bi-specific diabodies of the présent invention are engineered so that such first and second polypeptides covalently bond to one another via cysteine residues along their length. Such cysteine residues may be introduced into the intervening linker (e.g., Linker 1) that séparâtes the VL and VH domains of the polypeptides. Alternatively, and more preferably, a second peptide (Linker 2) is introduced into each polypeptide chain, for example, at a position Nterminal to the VL domain or C-terminal to the VH domain of such polypeptide chain. A preferred sequence for such Linker 2 is SEQ ID NO:30: GGCGGG.
[00106| The formation of heterodimers can be driven by further engineering such polypeptide chains to contain polypeptide coils of opposing charge. Thus, in a preferred embodiment, one of the polypeptide chains will be engineered to contain an “E-coil” domain (SEQ ID NO:34: EVAALEKEVAALEKEVAALEKEVAALEK) whose residues will form a négative charge at pH 7, while the other of the two polypeptide chains will be engineered to contain an “K-coil” domain (SEQ ID NO:35: KVAALKEKVAALKEKVAALKEKVAALKE) whose residues will form a positive charge at pH 7. The presence of such charged domains promotes association between the first and second polypeptides, and thus fosters heterodimerization.
[00107] It is immaterial which coil is provided to the first or second polypeptide chains. However, a preferred sequence-optimized CD 123 X CD3 bi-specific diabody of the présent invention (“DART-A”) has a first polypeptide chain having the sequence (SEQ ID NO:1):
QAVVTQEPSLTVSPGGTVTLTCRSSTGAVTTSNYANWVQQKPGQAPRGLIGG TNKRAPWTPARFSGSLLGGKAALTITGAQAEDEADYYCALWYSNLWVFGGGT KLTVLGGGGSGGGGEVQLVQSGAELKKPGASVKVSCKASGYTFTDYYMKWVR QAPGQGLEWIGDIIPSNGATFYNQKFKGRVTITVDKSTSTAYMELSSLRSED TAVYYCARSHLLRASWFAYWGQGTLVTVSSGGCGGGEVAALEKEVAALEKEV AALEKEVAALEK
-341
[00108] DART-A Chain 1 is composée! of: SEQ ID NO:21 - SEQ ID NO:29 SEQ ID NO:26 - SEQ ID NO:30 - SEQ ID NO:34. A DART-A Chain 1 encoding polynucleotide is SEQ ID NO:2:
caggctgtggtgactcaggagccttcactgaccgtgtccccaggcggaactg tgaccctgacatgcagatccagcacaggcgcagtgaccacatctaactacgc caattgggtgcagcagaagccaggacaggcaccaaggggcctgatcgggggt acaaacaaaagggctccctggacccctgcacggttttctggaagtctgctgg gcggaaaggccgctctgactattaccggggcacaggccgaggacgaagccga ttactattgtgctctgtggtatagcaatctgtgggtgttcgggggtggcaca aaactgactgtgctgggagggggtggatccggcggcggaggcgaggtgcagc tggtgcagtccggggctgagctgaagaaacccggagcttccgtgaaggtgtc ttgcaaagccagtggctacaccttcacagactactatatgaagtgggtcagg caggctccaggacagggactggaatggatcggcgatatcattccttccaacg gggccactttctacaatcagaagtttaaaggcagggtgactattaccgtgga caaatcaacaagcactgcttatatggagctgagctccctgcgctctgaagat acagccgtgtactattgtgctcggtcacacctgctgagagccagctggtttg cttattggggacagggcaccctggtgacagtgtcttccggaggatgtggcgg tggagaagtggccgcactggagaaagaggttgctgctttggagaaggaggtc gctgcacttgaaaaggaggtcgcagccctggagaaa
[00109] The second polypeptide chain of DART-A has the sequence (SEQ ID
NO:3):
DFVMTQSPDSLAVSLGERVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKL LIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPYTF GQGTKLEIKGGGSGGGGEVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMN WVRQAPGKGLEWVGRIRSKYNNYATYYADSVKDRFTISRDDSKNSLYLQMNS LKTEDTAVYYCVRHGNFGNSYVSWFAYWGQGTLVTVSSGGCGGGKVAALKEK VAALKEKVAALKEKVAALKE
[00110] DART-A Chain 2 is composed of: SEQ ID NO:25 — SEQ ID NO:29 — SEQ ID NO:22 — SEQ ID NO:30 — SEQ ID NO:35. A DART-A Chain 2 encoding polynucleotide is SEQ ID NO:4:
gacttcgtgatgacacagtctcctgatagtctggccgtgagtctgggggagc gggtgactatgtcttgcaagagctcccagtcactgctgaacagcggaaatca gaaaaactatctgacctggtaccagcagaagccaggccagccccctaaactg ctgatctattgggcttccaccagggaatctggcgtgcccgacagattcagcg gcagcggcagcggcacagattttaccctgacaatttctagtctgcaggccga ggacgtggctgtgtactattgtcagaatgattacagctatccctacactttc ggccaggggaccaagctggaaattaaaggaggcggatccggcggcggaggcg aggtgcagctggtggagtctgggggaggcttggtccagcctggagggtccct gagactctcctgtgcagcctctggattcaccttcagcacatacgctatgaat tgggtccgccaggctccagggaaggggctggagtgggttggaaggatcaggt ccaagtacaacaattatgcaacctactatgccgactctgtgaaggatagatt caccatctcaagagatgattcaaagaactcactgtatctgcaaatgaacagc ctgaaaaccgaggacacggccgtgtattactgtgtgagacacggtaacttcg
-3520146 gcaattcttacgtgtcttggtttgcttattggggacaggggacactggtgac tgtgtcttccggaggatgtggcggtggaaaagtggccgcactgaaggagaaa gttgctgctttgaaagagaaggtcgccgcacttaaggaaaaggtcgcagccc tgaaagag
[00111] As discussed below, the sequcncc-optimized CD 123 x CD3 bi-spccific diabody (DART-A) was found to hâve the ability to simultaneously bind CD 123 and CD3 as arrayed by human and monkey cells. Provision of DART-A was found to cause T cell activation, to médiate blast réduction, to drive T cell expansion, to inducc T cell activation and to cause the redirected killing of target cancer cells.
II. Comparative Non-Sequence-Optimized CD123 x CD3 Bi-Specific Diabody, “DART-B”
[00112] DART-B is a non-sequence-optimized CD 123 x CD3 bi-specific diabody having a gross structure that is similar to that of DART-A. The first polypeptide chain of DART-B will comprise, in the N-tcrminal to C-terminal direction, an Nterminus, a VL domain of a monoclonal antibody capable of binding to CD3 (VLcdî), an intervening linker peptide (Linker 1), a VH domain of a monoclonal antibody capable of binding to CD 123 (VHcdi23), an intervening Linker 2, an E-coil Domain, and a C-terminus. The VLcds Domain of the first polypeptide chain of DART-B has the sequence (SEQ ID NO:23):
DIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSK VASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLE LK
The VHcdi23 Domain of the first polypeptide chain of DART-B has the sequence (SEQID NO:28):
QVQLVQSGAELKKPGASVKVSCKASGYTFTDYYMKWVRQAPGQGLEWIGDII PSNGATFYNQKFKGRVTITVDKSTSTAYMELSSLRSEDTAVYYCARSHLLRA SWFAYWGQGTLVTVS S
[00113] Thus, DART-B Chain 1 is composed of: SEQ ID NO:23 - SEQ ID NO:29 — SEQ ID NO:28 — SEQ ID NO:30 — SEQ ID NO:34. The sequence of the first polypeptide chain of DART-B is (SEQ ID NO:5):
DIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSK VASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLE LKGGGSGGGGQVQLVQSGAELKKPGASVKVSCKASGYTFTDYYMKWVRQAPG QGLEWIGDIIPSNGATFYNQKFKGRVTITVDKSTSTAYMELSSLRSEDTAVY
- 3620146
YCARSHLLRASWFAYWGQGTLVTVSSGGCGGGEVAALEKEVAALEKEVAALE KEVAALEK
[00114] A DART-B Chain 1 encoding polynucleotide is SEQ ID NO:6:
gacattcagctgacccagtctccagcaatcatgtctgcatctccaggggaga aggtcaccatgacctgcagagccagttcaagtgtaagttacatgaactggta ccagcagaagtcaggcacctcccccaaaagatggatttatgacacatccaaa gtggcttctggagtcccttatcgcttcagtggcagtgggtctgggacctcat actctctcacaatcagcagcatggaggctgaagatgctgccacttattactg ccaacagtggagtagtaacccgctcacgttcggtgctgggaccaagctggag ctgaaaggaggcggatccggcggcggaggccaggtgcagctggtgcagtccg gggctgagctgaagaaacccggagcttccgtgaaggtgtcttgcaaagccag tggctacaccttcacagactactatatgaagtgggtcaggcaggctccagga cagggactggaatggatcggcgatatcattccttccaacggggccactttct acaatcagaagtttaaaggcagggtgactattaccgtggacaaatcaacaag cactgcttatatggagctgagctccctgcgctctgaagatacagccgtgtac tattgtgctcggtcacacctgctgagagccagctggtttgcttattggggac agggcaccctggtgacagtgtcttccggaggatgtggcggtggagaagtggc cgcactggagaaagaggttgctgctttggagaaggaggtcgctgcacttgaa aaggaggtcgcagccctggagaaa
[00115] The second polypeptide chain of DART-B will comprise, in the N-terminal to C-terminal direction, an N-tcrminus, a VL domain of a monoclonal antibody capable of binding to CD123 (VLcdiij), an intervening linker peptide (Linker 1) and a VH domain of a monoclonal antibody capable of binding to CD3 (VHcdj), an intervening Linker 2, a K-coil Domain, and a C-tcrminus.
[00116] The VLCdi23 Domain of the second polypeptide chain of DART-B has the sequence (SEQ ID NO:27):
DFVMTQSPDSLAVSLGERVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKL LIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPYTF GQGTKLEIK
The VHCd3 Domain of the second polypeptide chain of DART-B has the sequence (SEQ ID NO:24):
DIKLQQSGAELARPGASVKMSCKTSGYTFTRYTMHWVKQRPGQGLEWIGYIN PSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHY CLDYWGQGTTLTVSS
-3720146
[00117] Thus, DART-B Chain 2 is composée! of: SEQ ID NO:27 - SEQ ID NO:29 — SEQ ID NO:24 — SEQ ID NO:30 — SEQ ID NO:35. The sequence of the second polypeptide chain of DART-B is (SEQ ID NO:7):
DFVMTQSPDSLAVSLGERVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKL LIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPYTF GQGTKLEIKGGGSGGGGDIKLQQSGAELARPGASVKMSCKTSGYTFTRYTMH WVKQRPGQGLEWIGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLT SEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSGGCGGGKVAALKEKVAALKE KVAALKEKVAALKE
[00118] A DART-B Chain 2 encoding polynucleotide is SEQ ID NO:8:
gacttcgtgatgacacagtctcctgatagtctggccgtgagtctgggggagc gggtgactatgtcttgcaagagctcccagtcactgctgaacagcggaaatca gaaaaactatctgacctggtaccagcagaagccaggccagccccctaaactg ctgatctattgggcttccaccagggaatctggcgtgcccgacagattcagcg gcagcggcagcggcacagattttaccctgacaatttctagtctgcaggccga ggacgtggctgtgtactattgtcagaatgattacagctatccctacactttc ggccaggggaccaagctggaaattaaaggaggcggatccggcggcggaggcg atatcaaactgcagcagtcaggggctgaactggcaagacctggggcctcagt gaagatgtcctgcaagacttctggctacacctttactaggtacacgatgcac tgggtaaaacagaggcctggacagggtctggaatggattggatacattaatc ctagccgtggttatactaattacaatcagaagttcaaggacaaggccacatt gactacagacaaatcctccagcacagcctacatgcaactgagcagcctgaca tctgaggactctgcagtctattactgtgcaagatattatgatgatcattact gccttgactactggggccaaggcaccactctcacagtctcctccggaggatg tggcggtggaaaagtggccgcactgaaggagaaagttgctgctttgaaagag aaggtcgccgcacttaaggaaaaggtcgcagccctgaaagag
III. Modified Variants of Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A)
A. Sequence-Optimized CD123 x CD3 Bi-Specific Diabody Having An Albumin-Binding Domain (DART-A with ABD “w/ABD”)
[00119] In a second embodiment of the invention, the sequence-optimized CD 123 x CD3 bi-specifîc diabody (DART-A) will comprise one or more Albumin-Binding Domain (“ABD”) (DART-A with ABD “w/ABD”) on one or both of the polypeptide chains of the diabody.
[00120] As disclosed in WO 2012/018687, in order to improve the in vivo pharmacokinetic properties of diabodies, the diabodies may be modified to contain a polypeptide portion of a serum-binding protein at one or more of the termini of the diabody. Most preferably, such polypeptide portion of a serum-binding protein will
-3820146 be installed at the C-terminus of the diabody. A particularly preferred polypeptide portion of a serum-binding protein for this purpose is the Albumin-Binding Domain (ABD) from streptococcal protein G. The Albumin-Binding Domain 3 (ABD3) of protein G of Streptococcus strain G148 is particularly preferred.
[00121] The Albumin-Binding Domain 3 (ABD3) of protein G of Streptococcus strain G148 consists of 46 amino acid residues forming a stable three-helix bundle and has broad albumin-binding specificity (Johansson, M.U. et al. (2002) “Structure, Specifîcity, And Mode Of Interaction For Bacterial Albumin-Binding Modules,” J. Biol. Chem. 277(10):8114-8120). Albumin is the most abundant protein in plasma and has a half-life of 19 days in humans. Albumin possesses several small molécule binding sites that permit it to non-covalently bind to other proteins and thereby extend their sérum half-lives.
[00122] Thus, the first polypeptide chain of such a sequence-optimized CD 123 X CD3 bi-specific diabody having an Albumin-Binding Domain contains a third linker (Linker 3), which séparâtes the E-coil (or K-coil) of such polypeptide chain from the Albumin-Binding Domain. A preferred sequence for such Linker 3 is SEQ ID NO:31: GGGS. A preferred Albumin-Binding Domain (ABD) has the sequence (SEQ ID NO:36): LAEAKVLANRELDKYGVSDYYKNLIDNAKSAEGVKALIDEILAALP.
[00123] Thus, a preferred first chain of a sequence-optimized CD 123 x CD3 bispecific diabody having an Albumin-Binding Domain has the sequence (SEQ ID NO:9):
QAVVTQEPSLTVSPGGTVTLTCRSSTGAVTTSNYANWVQQKPGQAPRGLIGG TNKRAPWTPARFSGSLLGGKAALTITGAQAEDEADYYCALWYSNLWVFGGGT KLTVLGGGGSGGGGEVQLVQSGAELKKPGASVKVSCKASGYTFTDYYMKWVR QAPGQGLEWIGDIIPSNGATFYNQKFKGRVTITVDKSTSTAYMELSSLRSED TAVYYCARSHLLRASWFAYWGQGTLVTVSSGGCGGGEVAALEKEVAALEKEV AALEKEVAALEKGGGSLAEAKVLANRELDKYGVSDYYKNLIDNAKSAEGVKA LIDEILAALP
[00124] A sequence-optimized CD 123 X CD3 diabody having an Albumin-Binding Domain is composed of: SEQ ID NO:21 — SEQ ID NO:29 — SEQ ID NO:26 — SEQ ID NO:30 - SEQ ID NO:34 - SEQ ID NO:31 - SEQ ID NO:36. A
-39, !
polynucleotide encoding such a sequence-optimized CD 123 x CD3 diabody having an
Albumin-Binding Domain dérivative is SEQ TD NO: 10:
caggctgtggtgactcaggagccttcactgaccgtgtccccaggcggaactg tgaccctgacatgcagatccagcacaggcgcagtgaccacatctaactacgc caattgggtgcagcagaagccaggacaggcaccaaggggcctgatcgggggt acaaacaaaagggctccctggacccctgcacggttttctggaagtctgctgg gcggaaaggccgctctgactattaccggggcacaggccgaggacgaagccga ttactattgtgctctgtggtatagcaatctgtgggtgttcgggggtggcaca aaactgactgtgctgggagggggtggatccggcggcggaggcgaggtgcagc tggtgcagtccggggctgagctgaagaaacccggagcttccgtgaaggtgtc ttgcaaagccagtggctacaccttcacagactactatatgaagtgggtcagg caggctccaggacagggactggaatggatcggcgatatcattccttccaacg gggccactttctacaatcagaagtttaaaggcagggtgactattaccgtgga caaatcaacaagcactgcttatatggagctgagctccctgcgctctgaagat acagccgtgtactattgtgctcggtcacacctgctgagagccagctggtttg cttattggggacagggcaccctggtgacagtgtcttccggaggatgtggcgg tggagaagtggccgcactggagaaagaggttgctgctttggagaaggaggtc gctgcacttgaaaaggaggtcgcagccctggagaaaggcggcgggtctctgg ccgaagcaaaagtgctggccaaccgcgaactggataaatatggcgtgagcga ttattataagaacctgattgacaacgcaaaatccgcggaaggcgtgaaagca ctgattgatgaaattctggccgccctgcct
[00125] The second polypeptide chain of such a sequence-optimized CD 123 X CD3 diabody having an Albumin-Binding Domain has the sequence described above (SEQ ID NO:3) and is encoded by a polynucleotide having the sequence of SEQ ID NO:4.
B. Sequence-Optimized CD123 x CD3 Bi-Specific Diabodies Having An IgG Fc Domain (DART-A with Fc “w/Fc”)
[00126] In a third embodiment, the invention provides a sequence-optimized CD 123 x CD3 bi-specific diabody composed of three polypeptide chains and possessing an IgG Fc Domain (DART-A with Fc “w/Fc” Version 1 and Version 2) (Figure 3A-3B).
[00127] In order to form such IgG Fc Domain, the first and third polypeptide chain of the diabodies contain, in the N-terminal to C-terminal direction, a cysteine-containing peptide, (most preferably, Peptide 1 having the amino acid sequence (SEQ ID NO:55): DKTHTCPPCP), some or ail of the CH2 Domain and/or some or ail of the CH3 Domain of a complété immunoglobulin Fc Domain, and a C-tcrminus. The some or ail of the CH2 Domain and/or the some or ail of the CH3 Domain associate to form the immunoglobulin Fc Domain of the bi-specific monovalent Fc Domaincontaining diabodies of the présent invention. The first and second polypeptide
-4020146 chains of the bi-specific monovalent Fc diabodies of the présent invention are covalently bonded to one another, for example by disulfidc bonding of cysteine residues located within the cysteine-containing peptide of the polypeptide chains.
[00128] The CH2 and/or CH3 Domains of the first and third polypeptides need not be identical, and advantageously are modified to foster complexing between the two polypeptides. For example, an amino acid substitution (preferably a substitution with an amino acid comprising a bulky side group forming a ‘knob’, e.g., tryptophan) can be introduced into the CH2 or CH3 Domain such that steric interférence will prevent interaction with a similarly mutated domain and will obligate the mutated domain to pair with a domain into which a complcmentary, or accommodating mutation has been engineered, i.e., ‘the hole’ (e.g., a substitution with glycine). Such sets of mutations can be engineered into any pair of polypeptides comprising the bi-specific monovalent Fc diabody molécule, and further, engineered into any portion of the polypeptides chains of said pair. Methods of protein engineering to favor heterodimerization over homodimerization are well known in the art, in particular with respect to the engineering of immunoglobulin-likc molécules, and are encompassed herein (see e.g., Ridgway et al. (1996) '“Knobs-Into-Holes’ Engineering Of Antibody CH3 Domains For Heavy Chain Heterodimerization, ” Protein Engr. 9:617-621, Atwell et al. (1997) Stable Heterodimers From Remodeling The Domain Interface Of A Homodimer Using A Phage Display Library, ” J. Mol. Biol. 270: 26-35, and Xie et al. (2005) A New Format Of Bispecific Antibody: Highly Efficient Heterodimerization, Expression And Tumor Cell Lysis, ’’ J. ImmunoL Methods 296:95-101; each of which is hereby incorporated herein by reference in its entirety). Preferably the ‘knob’ is engineered into the CH2-CH3 Domains of the first polypeptide chain and the ‘hole’ is engineered into the CH2-CH3 Domains of the third polypeptide chain. Thus, the ‘knob’ will help in preventing the first polypeptide chain from homodimerizing via its CH2 and/or CH3 Domains. As the third polypeptide chain preferably contains the ‘hole’ substitution it will heterodimerize with the first polypeptide chain as well as homodimerize with itself. A preferred knob is created by modifying a native IgG Fc Domain to contain the modification T366W. A preferred hole is created by modifying a native IgG Fc Domain to contain the modification T366S, L368A and Y407V. To aid in purifying
-41 20146 the third polypeptide chain homodimer from the final bi-specific monovalent Fc diabody comprising the first, second and third polypeptide chains, the protein A binding site of the CH2 and CH3 Domains of the third polypeptide chain is preferably mutated by amino acid substitution at position 435 (H435R). Thus, the third polypeptide chain homodimer will not bind to protein A, whereas the bi-specific monovalent Fc diabody will retain its ability to bind protein A via the protein A binding site on the first polypeptide chain.
[00129] A preferred sequence for the CH2 and CH3 Domains of an antibody Fc Domain présent in the first polypeptide chain is (SEQ ID NO:56):
APEAAGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEK TISKAKGQPREPQVYTLPPSREEMTKNQVSLWCLVKGFYPSDIAVEWESNGQ PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQ KSLSLSPGK
[00130] A preferred sequence for the CH2 and CH3 Domains of an antibody Fc Domain présent in the third polypeptide chain is (SEQ ID NO: 11):
APEAAGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEK TISKAKGQPREPQVYTLPPSREEMTKNQVSLSCAVKGFYPSDIAVEWESNGQ PENNYKTTPPVLDSDGSFFLVSKLTVDKSRWQQGNVFSCSVMHEALHNRYTQ KSLSLSPGK
C. DART-A w/Fc A'ersion 1 Construct
[00131] In order to illustratc such Fc diabodies, the invention provides a DART-A w/Fc version 1 construct. The first polypeptide of the DART-A w/Fc version 1 construct comprises, in the N-tcrminal to C-tcrminal direction, an N-terminus, a VL domain of a monoclonal antibody capable of binding to CD 123 (VLcdizi), an intervening linker peptide (Linker 1), a VH domain of a monoclonal antibody capable of binding to CD3 (VHcdj), a Linker 2, an E-coil Domain, a Linker 5, Peptide 1, a polypeptide that contains the CH2 and CH3 Domains of an Fc Domain and a Cterminus. A preferred Linker 5 has the sequence (SEQ ID NO:32): GGG. A preferred polypeptide that contains the CH2 and CH3 Domains of an Fc Domain has the sequence (SEQ ID NO:37):
-4220146
APEAAGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEK TISKAKGQPREPQVYTLPPSREEMTKNQVSLWCLVKGFYPSDIAVEWESNGQ PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQ KSLSLSPGK
[00132] Thus, the first polypeptide of such a DART-A w/Fc version 1 construct is composed of: SEQ ID NO:25 - SEQ ID NO:29 - SEQ ID NO:22 - SEQ ID NO:30 - SEQ ID NO:34 - SEQ ID NO:32 - SEQ ID NO:55 - SEQ ID NO:37.
[00133] A preferred sequence of the first polypeptide of such a DART-A w/Fc version 1 construct has the sequence (SEQ ID NO: 13):
DFVMTQSPDSLAVSLGERVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKL LIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPYTF GQGTKLEIKGGGSGGGGEVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMN WVRQAPGKGLEWVGRIRSKYNNYATYYADSVKDRFTISRDDSKNSLYLQMNS LKTEDTAVYYCVRHGNFGNSYVSWFAYWGQGTLVTVSSGGCGGGEVAALEKE VAALEKEVAALEKEVAALEKGGGDKTHTCPPCPAPEAAGGPSVFLFPPKPKD TLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYR VVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPP SREEMTKNQVSLWCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFF LYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
[00134] A preferred polynucleotide encoding such a polypeptide is (SEQ ID
NO: 14):
gacttcgtgatgacacagtctcctgatagtctggccgtgagtctgggggagc gggtgactatgtcttgcaagagctcccagtcactgctgaacagcggaaatca gaaaaactatctgacctggtaccagcagaagccaggccagccccctaaactg ctgatctattgggcttccaccagggaatctggcgtgcccgacagattcagcg gcagcggcagcggcacagattttaccctgacaatttctagtctgcaggccga ggacgtggctgtgtactattgtcagaatgattacagctatccctacactttc ggccaggggaccaagctggaaattaaaggaggcggatccggcggcggaggcg aggtgcagctggtggagtctgggggaggcttggtccagcctggagggtccct gagactctcctgtgcagcctctggattcaccttcagcacatacgctatgaat tgggtccgccaggctccagggaaggggctggagtgggttggaaggatcaggt ccaagtacaacaattatgcaacctactatgccgactctgtgaaggatagatt caccatctcaagagatgattcaaagaactcactgtatctgcaaatgaacagc ctgaaaaccgaggacacggccgtgtattactgtgtgagacacggtaacttcg gcaattcttacgtgtcttggtttgcttattggggacaggggacactggtgac tgtgtcttccggaggatgtggcggtggagaagtggccgcactggagaaagag gttgctgctttggagaaggaggtcgctgcacttgaaaaggaggtcgcagccc tggagaaaggcggcggggacaaaactcacacatgcccaccgtgcccagcacc tgaagccgcggggggaccgtcagtcttcctcttccccccaaaacccaaggac accctcatgatctcccggacccctgaggtcacatgcgtggtggtggacgtga gccacgaagaccctgaggtcaagttcaactggtacgtggacggcgtggaggt
-43 20146 gcataatgccaagacaaagccgcgggaggagcagtacaacagcacgtaccgt gtggtcagcgtcctcaccgtcctgcaccaggactggctgaatggcaaggagt acaagtgcaaggtctccaacaaagccctcccagcccccatcgagaaaaccat ctccaaagccaaagggcagccccgagaaccacaggtgtacaccctgccccca tcccgggaggagatgaccaagaaccaggtcagcctgtggtgcctggtcaaag gcttctatcccagcgacatcgccgtggagtgggagagcaatgggcagccgga gaacaactacaagaccacgcctcccgtgctggactccgacggctccttcttc ctctacagcaagctcaccgtggacaagagcaggtggcagcaggggaacgtct tctcatgctccgtgatgcatgaggctctgcacaaccactacacgcagaagag cctctccctgtctccgggtaaa
[00135] The second chain of such a DART-A w/Fc version 1 construct will comprise, in the N-terminal to C-terminal direction, an N-terminus, a VL domain of a monoclonal antibody capable of binding to CD3 (VLcds), an intervening linker peptide (Linker 1), a VH domain of a monoclonal antibody capable of binding to CD 123 (VHcdi23), a Linker 2, a K-coil Domain, and a C-terminus. Thus, the second polypeptide of such a DART-A w/Fc version 1 construct is composed of: SEQ ID NO:21 - SEQ ID NO:29 - SEQ ID NO:26 - SEQ ID NO:30 - SEQ ID NO:35 Such a polypeptide has the sequence (SEQ ID NO:15):
QAVVTQE P SLTVS PGGTVTLTCRS S TGAVTT SNYANWVQQKPGQAPRGLI GG TNKRAPWTPARFSGSLLGGKAALTITGAQAEDEADYYCALWYSNLWVFGGGT KLTVLGGGGSGGGGEVQLVQSGAELKKPGASVKVSCKASGYTFTDYYMKWVR QAPGQGLEWIGDIIPSNGATFYNQKFKGRVTITVDKSTSTAYMELSSLRSED TAVYYCARSHLLRASWFAYWGQGTLVTVSSGGCGGGKVAALKEKVAALKEKV AALKEKVAALKE
[00136] A preferred polynucleotide encoding such a polypeptide has the sequence (SEQ ID NO: 16):
caggctgtggtgactcaggagccttcactgaccgtgtccccaggcggaactg tgaccctgacatgcagatccagcacaggcgcagtgaccacatctaactacgc caattgggtgcagcagaagccaggacaggcaccaaggggcctgatcgggggt acaaacaaaagggctccctggacccctgcacggttttctggaagtctgctgg gcggaaaggccgctctgactattaccggggcacaggccgaggacgaagccga ttactattgtgctctgtggtatagcaatctgtgggtgttcgggggtggcaca aaactgactgtgctgggagggggtggatccggcggcggaggcgaggtgcagc tggtgcagtccggggctgagctgaagaaacccggagcttccgtgaaggtgtc ttgcaaagccagtggctacaccttcacagactactatatgaagtgggtcagg caggctccaggacagggactggaatggatcggcgatatcattccttccaacg gggccactttctacaatcagaagtttaaaggcagggtgactattaccgtgga caaatcaacaagcactgcttatatggagctgagctccctgcgctctgaagat acagccgtgtactattgtgctcggtcacacctgctgagagccagctggtttg cttattggggacagggcaccctggtgacagtgtcttccggaggatgtggcgg tggaaaagtggccgcactgaaggagaaagttgctgctttgaaagagaaggtc gccgcacttaaggaaaaggtcgcagccctgaaagag
-4420146
[00137] The third polypeptide chain of such a DART-A w/Fc version 1 will comprise the CH2 and CH3 Domains of an IgG Fc Domain. A preferred polypeptide that is composed of Peptide 1 (SEQ ID NO:55) and the CH2 and CH3 Domains of an Fc Domain (SEQ ID NO:11) and has the sequence of SEQ ID NO:54:
DKTHTCPPCPAPEAAGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPE VKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVS NKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLSCAVKGFYPSD IAVEWESNGQPENNYKTTPPVLDSDGSFFLVSKLTVDKSRWQQGNVFSCSVM HEALHNRYTQKSLSLSPGK
[00138] A preferred polynucleotide that encodes such a polypeptide has the sequence (SEQ ID NO:12):
gacaaaactcacacatgcccaccgtgcccagcacctgaagccgcggggggac cgtcagtcttcctcttccccccaaaacccaaggacaccctcatgatctcccg gacccctgaggtcacatgcgtggtggtggacgtgagccacgaagaccctgag gtcaagttcaactggtacgtggacggcgtggaggtgcataatgccaagacaa agccgcgggaggagcagtacaacagcacgtaccgtgtggtcagcgtcctcac cgtcctgcaccaggactggctgaatggcaaggagtacaagtgcaaggtctcc aacaaagccctcccagcccccatcgagaaaaccatctccaaagccaaagggc agccccgagaaccacaggtgtacaccctgcccccatcccgggaggagatgac caagaaccaggtcagcctgagttgcgcagtcaaaggcttctatcccagcgac atcgccgtggagtgggagagcaatgggcagccggagaacaactacaagacca cgcctcccgtgctggactccgacggctccttcttcctcgtcagcaagctcac cgtggacaagagcaggtggcagcaggggaacgtcttctcatgctccgtgatg catgaggctctgcacaaccgctacacgcagaagagcctctccctgtctccgg gtaaa
D. DART-A w/Fc Version 2 Construct
[00139] As a second example of such a DART-A w/Fc diabody, the invention provides a three chain diabody, “DART-A w/Fc Diabody Version 2” (Figure 3B).
[00140] The first polypeptide of such a DART-A w/Fc version 2 construct comprises, in the N-terminal to C-terminal direction, an N-terminus, a peptide linker (Peptide 1), a polypeptide that contains the CH2 and CH3 Domains of an Fc Domain linked (via a Linker 4) to the VL domain of a monoclonal antibody capable of binding to CD 123 (VLCdi23), an intcrvening linker peptide (Linker 1), a VH domain of a monoclonal antibody capable of binding to CD3 (VHcdî), a Linker 2, a K-coil Domain, and a Cterminus.
-45 20146
[00141] A preferred polypeptide that contains the CH2 and CH3 Domains of an Fc
Domain has the sequence (SEQ ID NO:37):
APEAAGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEK TISKAKGQPREPQVYTLPPSREEMTKNQVSLWCLVKGFYPSDIAVEWESNGQ PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQ KSLSLSPGK
[00142] “Linker 4” will preferably comprise the amino acid sequence (SEQ ID
NO:57): APSSS. A preferred “Linker 4” has the sequence (SEQ ID NO:33):
APS S S PME. Thus, the first polypeptide of such a DART-A w/Fc version 2 construct is composed of: SEQ ID NO:55 - SEQ ID NO:37 - SEQ ID NO:33 - SEQ ID NO:25 - SEQ ID NO:29 - SEQ ID NO:22 - SEQ ID NO:30 - SEQ ID NO:35.
A polypeptide having such a sequence is (SEQ ID NO: 17):
DKTHTCPPCPAPEAAGGPSVFLFPPKPKDTLMISRTPEVTCVWDVSHEDPE VKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVS NKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLWCLVKGFYPSD IAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVM HEALHNHYTQKSLSLSPGKAPSSSPMEDFVMTQSPDSLAVSLGERVTMSCKS SQSLLNSGNQKNYLTWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDF TLTISSLQAEDVAVYYCQNDYSYPYTFGQGTKLEIKGGGSGGGGEVQLVESG GGLVQPGGSLRLSCAASGFTFSTYAMNWVRQAPGKGLEWVGRIRSKYNNYAT YYADSVKDRFTISRDDSKNSLYLQMNSLKTEDTAVYYCVRHGNFGNSYVSWF AYWGQGTLVTVSSGGCGGGKVAALKEKVAALKEKVAALKEKVAALKE
[00143] A preferred polynucleotide encoding such a polypeptide has the sequence (SEQ1D NO:18):
gacaaaactcacacatgcccaccgtgcccagcacctgaagccgcggggggac cgtcagtcttcctcttccccccaaaacccaaggacaccctcatgatctcccg gacccctgaggtcacatgcgtggtggtggacgtgagccacgaagaccctgag gtcaagttcaactggtacgtggacggcgtggaggtgcataatgccaagacaa agccgcgggaggagcagtacaacagcacgtaccgtgtggtcagcgtcctcac cgtcctgcaccaggactggctgaatggcaaggagtacaagtgcaaggtctcc aacaaagccctcccagcccccatcgagaaaaccatctccaaagccaaagggc agccccgagaaccacaggtgtacaccctgcccccatcccgggaggagatgac caagaaccaggtcagcctgtggtgcctggtcaaaggcttctatcccagcgac atcgccgtggagtgggagagcaatgggcagccggagaacaactacaagacca cgcctcccgtgctggactccgacggctccttcttcctctacagcaagctcac cgtggacaagagcaggtggcagcaggggaacgtcttctcatgctccgtgatg catgaggctctgcacaaccactacacgcagaagagcctctccctgtctccgg gtaaagccccttccagctcccctatggaagacttcgtgatgacacagtctcc tgatagtctggccgtgagtctgggggagcgggtgactatgtcttgcaagagc tcccagtcactgctgaacagcggaaatcagaaaaactatctgacctggtacc agcagaagccaggccagccccctaaactgctgatctattgggcttccaccag
-4620146 ggaatctggcgtgcccgacagattcagcggcagcggcagcggcacagatttt accctgacaatttctagtctgcaggccgaggacgtggctgtgtactattgtc agaatgattacagctatccctacactttcggccaggggaccaagctggaaat taaaggaggcggatccggcggcggaggcgaggtgcagctggtggagtctggg ggaggcttggtccagcctggagggtccctgagactctcctgtgcagcctctg gattcaccttcagcacatacgctatgaattgggtccgccaggctccagggaa ggggctggagtgggttggaaggatcaggtccaagtacaacaattatgcaacc tactatgccgactctgtgaaggatagattcaccatctcaagagatgattcaa agaactcactgtatctgcaaatgaacagcctgaaaaccgaggacacggccgt gtattactgtgtgagacacggtaacttcggcaattcttacgtgtcttggttt gcttattggggacaggggacactggtgactgtgtcttccggaggatgtggcg gtggaaaagtggccgcactgaaggagaaagttgctgctttgaaagagaaggt cgccgcacttaaggaaaaggtcgcagccctgaaagag
[00144] The second polypeptide chain of such a DART-A w/Fc version 2 construct comprises, in the N-terminal to C-terminal direction, the VL domain of a monoclonal antibody capable of binding to CD3 (VLcdt), an intervening linker peptide (Linker 1) and a VH domain of a monoclonal antibody capable of binding to CD123 (VHcoub)· This portion of the molécule is linked (via Linker 2) to an E-coil Domain. Thus, the third polypeptide of such a DART-A w/Fc version 2 construct is composed of: SEQ
ID NO:21 - SEQ ID NO:29 - SEQ ID NO:26 - SEQ ID NO:30 - SEQ ID
NO:34. A polypeptide having such a sequence is (SEQ ID NO:1), and is preferably encoded by a polynucleotide having the sequence of SEQ ID NO:2.
[00145] The third polypeptide chain will comprise the CH2 and CH3 Domains of an
IgG Fc Domain. A preferred polypeptide is composed of Peptide 1 (SEQ ID NO:55) and the CH2 and CH3 Domains of an Fc Domain (SEQ ID NO: 11) and has the sequence of SEQ ID NO:54.
[00146] In order to assess the activity of the above-mentioned CD 123 x CD3 bispecific diabodies (DART-A, DART-A w/ABD, DART-A w/Fc, DART-B), a control bi-specific diabody (Control DART) was produced. The Control DART is capable of simultaneously binding to FITC and CD3. Its two polypeptide chains hâve the following respective sequences:
Control DART Chain 1 (SEQ ID NO: 19):
DVVMTQT PFSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQS PKVL IYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPWTFG GGTKLEIKGGGSGGGGEVQLVESGGGLVQPGGSLRLSCAASGFTFNTYAMNW VRQAPGKGLEWVARIRSKYNNYATYYADSVKDRFTISRDDSKNSLYLQMNSL
-4720146
KTEDTAVYYCVRHGNFGNSYVSWFAYWGQGTLVTVSSGGCGGGEVAALEKEV AALEKEVAALEKEVAALEK
Control DART Chain 2 (SEQ ID NO:20):
QAVVTQEPSLTVSPGGTVTLTCRSSTGAVTTSNYANWVQQKPGQAPRGLIGG TNKRAPWTPARFSGSLLGGKAALTITGAQAEDEADYYCALWYSNLWVFGGGT KLTVLGGGGSGGGGEVKLDETGGGLVQPGRPMKLSCVASGFTFSDYWMNWVR QSPEKGLEWVAQIRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRV EDMGIYYCTGSYYGMDYWGQGTSVTVSSGGCGGGKVAALKEKVAALKEKVAA LKEKVAALKE
IV. Pharmaceutical Compositions
[00147] The compositions of the invention include bulk dmg compositions useful in the manufacture of pharmaceutical compositions (e.g., impure or non-sterile compositions) and pharmaceutical compositions (Le., compositions that are suitable for administration to a subject or patient) which can be used in the préparation of unit dosage forms. Such compositions comprise a prophylactically or therapeutically effective amount of the sequence-optimized CD 123 x CD3 bi-specific diabodies of the présent invention, or a combination of such agents and a pharmaceutically acceptable carrier. Preferably, compositions of the invention comprise a prophylactically or therapeutically effective amount of the sequence-optimized CD 123 x CD3 bi-specific diabody of the invention and a pharmaceutically acceptable carrier.
[00148] The invention also encompasses pharmaceutical compositions comprising sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention, and a second therapeutic antibody (e.g., tumor spécifie monoclonal antibody) that is spécifie for a particular cancer antigen, and a pharmaceutically acceptable carrier.
[00149] In a spécifie embodiment, the term “pharmaceutically acceptable” means approved by a regulatory agency of the Fédéral or a state government or listed in the U.S. Pharmacopeia or other generally recognized pharmacopeia for use in animais, and more particularly in humans. The term “carrier” refers to a diluent, adjuvant (e.g., Freund’s adjuvant (complété and incomplète), excipient, or vehicle with which the therapeutic is administered. Such pharmaceutical carriers can be stérile liquids, such as water and oils, including those of petroleum, animal, vegetable or synthetic origin, such as peanut oil, soybean oil, minerai oil, sesame oil and the like. Water is a
-4820146 preferred carrier when the pharmaceutical composition is administered intravenously. Saline solutions and aqueous dextrose and glycerol solutions can also be employed as liquid carriers, particularly for injectable solutions. Suitable pharmaceutical excipients include starch, glucose, lactose, sucrose, gelatin, malt, rice, flour, chalk, silica gel, sodium stéarate, glycerol monostearate, talc, sodium chloride, dried skim milk, glycerol, propylene, glycol, water, éthanol and the like. The composition, if desired, can also contain minor amounts of wetting or emulsifying agents, or pH buffering agents. These compositions can take the form of solutions, suspensions, émulsion, tablets, pills, capsules, powders, sustained-release formulations and the like.
[00150] Generally, the ingrédients of compositions of the invention are supplied either separately or mixed together in unit dosage form, for exampie, as a dry lyophilizcd powder or water free concentratc in a hcrmctically sealed container such as an ampoule or sachette indicating the quantity of active agent. Where the composition is to be administered by infusion, it can be dispensed with an infusion bottlc containing stérile pharmaceutical grade water or saline. Where the composition is administered by injection, an ampoule of stérile water for injection or saline can be provided so that the ingrédients may be mixed prior to administration.
100151] The compositions of the invention can be formulated as neutral or sait forms. Pharmaceutically acceptable salts include, but are not limited to those formed with anions such as those derived from hydrochloric, phosphoric, acetic, oxalic, tartaric acids, etc., and those formed with cations such as those derived from sodium, potassium, ammonium, calcium, ferrie hydroxides, isopropylamine, triethylamine, 2ethylamino éthanol, histidine, procaine, etc.
[00152] The invention also provides a pharmaceutical pack or kit comprising one or more containers fïlled with sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention alone or with such pharmaceutically acceptable carrier. Additionally, one or more other prophylactic or therapeutic agents useful for the treatment of a disease can also be included in the pharmaceutical pack or kit. The invention also provides a pharmaceutical pack or kit comprising one or more containers fïlled with
-4920146 one or more of the ingrédients of the pharmaceutical compositions of the invention. Optionally associated with such container(s) can be a notice in the form prescribed by a governmental agcncy regulating the manufacture, use or sale of pharmaceuticals or biological products, which notice reflects approval by the agency of manufacture, use or sale for human administration.
[00153] The présent invention provides kits that can be used in the above methods. A kit can comprise sequence-optimized CD 123 x CD3 bi-specifïc diabodies of the invention. The kit can further comprise one or more other prophylactic and/or therapeutic agents useful for the treatment of cancer, in one or more containers; and/or the kit can further comprise one or more cytotoxic antibodies that bind one or more cancer antigens associated with cancer. In certain embodiments, the other prophylactic or therapeutic agent is a chemotherapeutic. In other embodiments, the prophylactic or therapeutic agent is a biological or hormonal therapeutic.
V. Methods of Administration
[00154] The compositions of the présent invention may be provided for the treatment, prophylaxis, and amelioration of one or more symptoms associated with a disease, disorder or infection by administering to a subject an effective amount of a fusion protein or a conjugated molécule of the invention, or a pharmaceutical composition comprising a fusion protein or a conjugated molécule of the invention. In a preferred aspect, such compositions are substantially purified (i.e., substantially free from substances that limit its effect or produce undesired side effects). In a spécifie embodiment, the subject is an animal, preferably a mammal such as non-primate (e.g., bovine, equine, feline, canine, rodent, etc.) or a primate (e.g., monkey such as, a cynomolgus monkey, human, etc.). In a preferred embodiment, the subject is a human.
[00155] Various delivery Systems are known and can be used to administer the compositions of the invention, e.g., encapsulation in liposomes, microparticles, microcapsules, recombinant cells capable of expressing the antibody or fusion protein, receptor-mediated endocytosis (See, e.g., Wu et al. (1987) “Receptor-Mediated In Vitro Gene Transformation By A Soluble DNA Carrier System, ” J. Biol. Chem.
- 50 r , I 1 I (SV
262:4429-4432), construction of a nucleic acid as part of a rétro viral or other vector, etc.
[00156| Methods of administering a molécule of the invention include, but are not limited to, parentéral administration (e.g., intradermal, intramuscular, intraperitoneal, intravenous and subeutaneous), épidural, and mucosal (e.g., intranasal and oral routes). In a spécifie embodiment, the sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention are administered intramuscularly, intravenously, or subcutaneously. The compositions may be administered by any convenient route, for example, by infusion or bolus injection, by absorption through épithélial or mucocutaneous linings (e.g., oral mucosa, rectal and intestinal mucosa, etc.) and may be administered together with other biologically active agents. Administration can be systemic or local. In addition, pulmonary administration can also be employed, e.g., by use of an inhaler or nebulizer, and formulation with an acrosolizing agent. Sec, e.g., U.S. Patent Nos. 6,019,968; 5,985, 320; 5,985,309; 5,934,272; 5,874,064; 5,855,913; 5,290,540; and 4,880,078; and PCT Publication Nos. WO 92/19244; WO 97/32572; WO 97/44013; WO 98/31346; and WO 99/66903, each of which is incorporated herein by reference in its entirety.
[00157] The invention also provides that the sequence-optimized CD123 x CD3 bispecific diabodies of the invention are packaged in a hermetically sealed container such as an ampoule or sachette indicating the quantity of the molécule. In one embodiment, the sequence-optimized CD 123 X CD3 bi-specific diabodies of the invention are supplied as a dry sterilized lyophilized powder or water free concentrate in a hermetically sealed container and can be reconstituted, e.g., with water or saline to the appropriate concentration for administration to a subject. Preferably, the sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention are supplied as a dry stérile lyophilized powder in a hermetically sealed container at a unit dosage of at least 5 pg, more preferably at least 10 pg, at least 15 pg, at least 25 pg, at least 50 pg, at least 100 pg, or at least 200 pg.
[00158] The lyophilized sequence-optimized CD123 x CD3 bi-specific diabodies of the invention should be stored at between 2 and 8°C in their original container and the
- 51 a '' molécules should be administered within 12 hours, preferably within 6 hours, within 5 hours, within 3 hours, or within 1 hour after being reconstituted. In an alternative embodiment, sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention are supplied in liquid form in a hermetically sealed container indicating the quantity and concentration of the molécule, fusion protein, or conjugated molécule. Preferably, the liquid form of the sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention are supplied in a hermetically sealed container in which the molécules are présent at a concentration of least 1 pg/ml, more preferably at least 2.5 μg/ml, at least 5 μg/ml, at least 10 μg/ml, at least 50 μg/ml, or at least 100 pg/mL
[00159] The amount of the composition of the invention which will be effective in the treatment, prévention or amelioration of one or more symptoms associated with a disorder can be determined by standard clinical techniques. The précisé dose to be employed in the formulation will also dépend on the route of administration, and the seriousness of the condition, and should be decided according to the judgment of the practitioner and each patient’s circumstances. Effective doses may be extrapolated from dose-response curves derived from in vitro or animal model test Systems.
[00160] For sequence-optimized CD 123 x CD3 bi-specific diabodies encompassed by the invention, the dosage administered to a patient is preferably determined based upon the body weight (kg) of the récipient subject. The dosage administered is typically from at least about 0.3 ng/kg per day to about 0.9 ng/kg per day, from at least about 1 ng/kg per day to about 3 ng/kg per day, from at least about 3 ng/kg per day to about 9 ng/kg per day, from at least about 10 ng/kg per day to about 30 ng/kg per day, from at least about 30 ng/kg per day to about 90 ng/kg per day, from at least about 100 ng/kg per day to about 300 ng/kg per day, from at least about 200 ng/kg per day to about 600 ng/kg per day, from at least about 300 ng/kg per day to about 900 ng/kg per day, from at least about 400 ng/kg per day to about 800 ng/kg per day, from at least about 500 ng/kg per day to about 1000 ng/kg per day, from at least about 600 ng/kg per day to about 1000 ng/kg per day, from at least about 700 ng/kg per day to about 1000 ng/kg per day, from at least about 800 ng/kg per day to about 1000 ng/kg per day, from at least about 900 ng/kg per day to about 1000 ng/kg per day, or at least about 1,000 ng/kg per day.
I.
'1
[00161] In another embodiment, the patient is administered a treatment regimen comprising one or more doses of such prophylactically or therapeutically effective amount of the sequence-optimized CD123 x CD3 bi-specifîc diabodies encompassed by the invention, wherein the treatment regimen is administered over 2 days, 3 days, 4 days, 5 days, 6 days or 7 days. In certain embodiments, the treatment regimen comprises intermittently administering doses of the prophylactically or therapeutically effective amount of the sequence-optimized CD 123 x CD3 bi-specific diabodies encompassed by the invention (for example, administering a dose on day 1, day 2, day 3 and day 4 of a given week and not administering doses of the prophylactically or therapeutically effective amount of the sequence-optimized CD 123 x CD3 bi-specific diabodies encompassed by the invention on day 5, day 6 and day 7 of the same week). Typically, there are 1, 2, 3, 4, 5 or more courses of treatment. Each course may be the same regimen or a different regimen.
[00162] In another embodiment, the administered dose escalatcs over the first quarter, first half or first two-thirds or three-quarters of the regimen(s) (e.g., over the first, second, or third regimens of a 4 course treatment) until the daily prophylactically or therapeutically effective amount of the sequence-optimized CD 123 x CD3 bispecifîc diabodies encompassed by the invention is achieved.
[00163] Table 1 provides 5 examples of different dosing regimens described above for a typical course of treatment.
| Table 1 | ||||||
| Regimen | Day | Diabody Dosage (ng diabody per kg subject weight per day) | ||||
| 1 | 1,2,3,4 | 100 | 100 | 100 | 100 | 100 |
| 5,6,7 | none | none | none | none | none | |
| 2 | 1,2,3,4 | 300 | 500 | 700 | 900 | 1,000 |
| 5,6,7 | none | none | none | none | none | |
| 3 | 1,2,3,4 | 300 | 500 | 700 | 900 | 1,000 |
| 5,6,7 | none | none | none | none | none | |
| 4 | 1,2,3,4 | 300 | 500 | 700 | 900 | 1,000 |
| 5,6,7 | none | none | none | none | none |
[00164] The dosage and frequency of administration of sequence-optimized CD 123 x
CD3 bi-specific diabodies of the invention may be reduced or altered by enhancing
- 53 I uptake and tissue pénétration of the sequence-optimized CD 123 x CD3 bi-specific diabodies by modifications such as, for example, lipidation.
[00165] The dosage of the sequence-optimized CD123 x CD3 bi-specific diabodies of the invention administered to a patient may be calculated for use as a single agent therapy. Alternatively, the sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention are used in combination with other therapeutic compositions and the dosage administered to a patient are lower than when said molécules are used as a single agent therapy.
[00166] The pharmaceutical compositions of the invention may be administered locally to the area in need of treatment; this may be achieved by, for example, and not by way of limitation, local infusion, by injection, or by means of an implant, said implant being of a porous, non-porous, or gelatinous material, including membranes, such as sialastic membranes, or fibers. Preferably, when administering a molécule of the invention, care must be taken to use materials to which the molécule does not absorb.
[00167] The compositions of the invention can be delivered in a vesicle, in particular a liposome (See Langer (1990) New Methods Of Drug Delivery, ” Science 249:15271533); Treat et al., in Liposomes in the Therapy of Infectious Disease and Cancer, Lopez-Berestein and Fidler (eds.), Liss, New York, pp. 353- 365 (1989); LopezBcrestein, ibid., pp. 3 17-327; sec generally ibid.).
[00168] The compositions of the invention can be delivered in a controlled-release or sustained-release System. Any technique known to one of skill in the art can be used to produce sustained-release formulations comprising one or more sequenceoptimized CD123 x CD3 bi-specific diabodies of the invention. See, e.g., U.S. Patent No. 4,526,938; PCT publication WO 91/05548; PCT publication WO 96/20698; Ning et al. (1996) Intratumoral Radioimmunotheraphy Of A Human Colon Cancer Xenograft Using A Sustained-Release Gel,” Radiotherapy & Oncology 39:179-189, Song et al. (1995) Antibody Mediated Lung Targeting Of Long-Circulating Emulsions, ” PDA Journal of Pharmaceutical Science & Technology 50:372-397; Cleek et al. (1997) Biodégradable Polymeric Carriers For A bFGF Antibody For
-5420146
Cardiovascular Application, ” Pro. Int’l. Symp. Control. ReL Bioact. Mater. 24:853-854; and Lam et al. (1997) “Microencapsulation Of Recombinant Humanized Monoclonal Antibody For Local Delivery, ’’ Proc. Int’l. Symp. Control ReL Bioact. Mater. 24:759-760, each of which is incorporated herein by reference in its entirety. In one embodiment, a pump may be used in a controlled-release system (See Langer, supra-, Sefton, (1987) “Implantable Pumps,’’ CRC Crit. Rev. Biomed. Eng. 14:201240; Buchwald et al. (1980) “Long-Term, Continuous Intravenous Heparin Administration By An Implantable Infusion Pump In Ambulatory Patients With Récurrent Venons Thrombosis,” Surgery 88:507-516; and Saudek et al. (1989) “A Preliminary Trial Of The Programmable Implantable Médication System For Insulin Delivery,” N. Engl. J. Med. 321:574-579). In another embodiment, polymeric materials can be used to achieve controlled-release of the molécules (see e.g., Medical Applications of Controlled Release, Langer and Wise (eds.), CRC Près., Boca Raton, Florida (1974); CONTROLLED Drug Bioavailability, Drug Product Design and Performance, Smolen and Bail (eds.), Wiley, New York (1984); Levy et al. (1985) “Inhibition Of Calcification Of Bioprosthetic Heart Valves By Local Controlled-Release Diphosphonate,” Science 228:190-192; During et al. (1989) “Controlled Release Of Dopamine From A Polymeric Brain Implant: In Vivo Characterization,” Ann. Neurol. 25:351-356; Howard et al. (1989) “Intracérébral Drug Delivery In Rats With Lesion-Induced Memory: Déficits, ” J. Neurosurg. 7(1):105-112); ILS. Patent No. 5,679,377; U.S. Patent No. 5,916,597; U.S. Patent No. 5,912,015; U.S. Patent No. 5,989,463; U.S. Patent No. 5,128,326; PCT Publication No. WO 99/15154; and PCT Publication No. WO 99/20253). Examples of polymers used in sustained-release formulations include, but are not limited to, poly(2-hydroxy ethyl méthacrylate), poly(methyl méthacrylate), poly(acrylic acid), poly(ethylene-covinyl acetate), poly(methacrylic acid), polyglycolides (PLG), polyanhydrides, poly(Nvinyl pyrrolidone), poly(vinyl alcohol), polyacrylamide, poly(ethylene glycol), polylactides (PLA), poly(lactide-co-glycolides) (PLGA), and polyorthoesters. A controlled-release system can be placed in proximity of the therapeutic target (e.g., the lungs), thus requiring only a fraction of the systemic dose (see, e.g., Goodson, in Medical Applications of Controlled Release, supra, vol. 2, pp. 115-138 (1984)). Polymeric compositions useful as controlled-release implants can be used
-55) according to Dunn et al. (See U.S. 5,945,155). This particular method is based upon the therapeutic effect of the in situ controlled-release of the bioactive materiai from the polymer System. The implantation can generallv occur anywhere within the body of the patient in need of therapeutic treatment. A non-polymeric sustained delivery System can be used, whereby a non-polymeric implant in the body of the subject is used as a drug delivery system. Upon implantation in the body, the organic solvent of the implant will dissipate, disperse, or leach from the composition into surrounding tissue fluid, and the non-polymeric materiai will gradually coagulate or precipitate to form a solid, microporous matrix (See U.S. 5,888,533).
[00169] Controlled-release Systems are discussed in the review by Langer (1990, “New Methods Of Drug Delivery, ” Science 249:1527-1533). Any technique known to one of skill in the art can be used to produce sustained-release formulations comprising one or more therapeutic agents of the invention. Sec, e.g., U.S. Patent No. 4,526,938; International Publication Nos. WO 91/05548 and WO 96/20698; Ning et al. (1996) “Intratumoral Radioimmunotheraphy Of A Human Colon Cancer Xenograft Using A Sustained-Release Gel,” Radiotherapy & Oncology 39:179-189, Song et al. (1995) “Antibody Mediated Lung Targeting Of Long-Circulating Emulsions,” PDA Journal of Pharmaceutical Science & Technology 50:372-397; Cleek et al. (1997) “Biodégradable Polymeric Carriers For A b FGF Antibody For Cardiovascular Application, ” Pro. Int’l. Symp. Control. Rel. Bioact. Mater. 24:853-854; and Lam et al. (1997) “Microencapsulation Of Recombinant Humanized Monoclonal Antibody For Local Delivery, ” Proc. Int’l. Symp. Control Rel. Bioact. Mater. 24:759-760, each of which is incorporated herein by reference in its entirety.
[00170] Where the composition of the invention is a nucleic acid encoding a sequence-optimized CD 123 x CD3 bi-specific diabody of the invention, the nucleic acid can be administered in vivo to promote expression of its encoded sequenceoptimized CD 123 X CD3 bi-specific diabody, by constructing it as part of an appropriate nucleic acid expression vector and administering it so that it becomes intracellular, e.g., by use of a retroviral vector (See U.S. Patent No. 4,980,286), or by direct injection, or by use of microparticle bombardment (e.g., a gene gun; Biolistic, Dupont), or coating with lipids or cell-surface receptors or transfecting agents, or by
- 5620146 administering it in linkage to a homeobox-like peptide which is known to enter the nucléus (See e.g., Joliot et al. (1991) “Antennapedia Homeobox Peptide Régulâtes Neural Morphogenesis,” Proc. Natl. Acad. Sci. (U.S.A.) 88:1864-1868), etc. Altematively, a nucleic acid can be introduced intracellularly and incorporated within host cell DNA for expression by homologous recombination.
[00171] Treatment of a subject with a therapeutically or prophylactically effective amount of sequence-optimized CD 123 x CD3 bi-specific diabodies of the invention can include a single treatment or, preferably, can include a sériés of treatments. In a preferred example, a subject is treated with sequence-optimized CD 123 x CD3 bispecific diabodies of the invention one time per week for between about 1 to 10 weeks, preferably between 2 to 8 weeks, more preferably between about 3 to 7 weeks, and even more preferably for about 4, 5, or 6 weeks. The pharmaceutical compositions of the invention can be administered once a day, twice a day, or three times a day. Altematively, the pharmaceutical compositions can be administered once a week, twice a week, once every two weeks, once a month, once every six weeks, once every two months, twice a ycar or once per ycar. It will also bc appreciated that the effective dosage of the molécules used for treatment may increase or decrease over the course of a particular treatment.
VI. Uses of the Compositions of the Invention
[00172] The sequence-optimized CD 123 x CD3 bi-specific diabodies of the présent invention hâve the ability to treat any disease or condition associated with or characterized by the expression of CD 123. Thus, without limitation, such molécules may be employed in the diagnosis or treatment of acute myeloid leukemia (AML), chronic myelogenous leukemia (CML), including blastic crisis of CML and Abelson oncogene associated with CML (Bcr-ABL translocation), myelodysplastic syndrome (MDS), acute B lymphoblastic leukemia (B-ALL), chronic lymphocytic leukemia (CLL), including Richter’s syndrome or Richter’s transformation of CLL, hairy cell leukemia (HCL), blastic plasmacytoid dendritic cell neoplasm (BPDCN), nonHodgkin lymphomas (NHL), including mantel cell leukemia (MCL), and small lymphocytic lymphoma (SLL), Hodgkin’s lymphoma, systemic mastocytosis, and Burkitt’s lymphoma (see Example 2); Autoimmune Lupus (SLE), allergy, asthma and
- 57i i- ij f i' rheumatoid arthritis. The bi-specific diabodies of the présent invention may additionally be used in the manufacture of médicaments for the treatment of the above-described conditions.
[00173] Having now generally described the invention, the same will be more readily understood through reference to the following examples, which are provided by way of illustration and are not intended to be limiting of the présent invention unless specified.
Example 1
Construction Of CD123 x CD3 Bi-Specific Diabodies And Control Protein
[00174] Table 2 contains a list of bi-specific diabodies that were expressed and purified. Sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) and nonsequence-optimized CD 123 x CD3 bi-specific diabody (DART-B) are capable of simultaneously binding to CD 123 and CD3. The control bi-specific diabody (Control DART) is capable of simultaneously binding to FITC and CD3. The bi-specific diabodies are heterodimers or heterotrimers of the recited amino acid sequences.
Methods for forming bi-specific diabodies are provided in WO 2006/113665, WO 2008/157379, WO 2010/080538, WO 2012/018687, WO 2012/162068 and WO 2012/162067.
| Table 2 | ||
| Bi-Specific Diabodies | Polypeptide Chain Amino Acid Sequences | Nucleic Acid Encoding Sequences |
| Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A) (Binds to CD3 at epitope 1) | SEQID NO:1 SEQ ID NO:3 | SEQ ID NO:2 SEQ ID NO:4 |
| Non-Sequence-Optimized CDI23 X CD3 Bi-Specific Diabody (DART-B) (Binds to CD3 at epitope 2) | SEQ ID NO:5 SEQ TD NO:7 | SEQ ID NO:6 SEQ TD NO:8 |
| Sequence-Optimized CD123 x CD3 Bi-Specific Diabody Having an Albumin-Binding Domain (DART-A w/ABD) (Binds to CD3 at epitope 1 ) Comprises an Albumin-Binding Domain (ABD) for extension of halflife in vivo | SEQ ID NO:9 SEQ TD NO:3 | SEQID NQ:10 SEQ ID NO:4 |
-5820146
| Table 2 | ||
| Bi-Specific Diabodies | Polypeptide Chain Amino Acid Sequences | Nucleic Acid Encoding Sequences |
| Sequencc-Optimized CD123 x CD3 Bi-Specific Diabody Having an IgG Fc Domain Version 1 (DART-A w/Fc version 1) (Binds to CD3 at epitope 1 ) Comprises an Fc Domain for extension of half-life in vivo | SEQ ID NO:54 SEQ ED NO:13 SEQIDNO:15 | SEQID NO:12 SEQID NO:14 SEQID NO:16 |
| Sequence-Optimized CD123 x CD3 Bi-Speciiïc Diabody Having an IgG Fc Domain Version 2 (DART-A w/Fc version 2) (Binds to CD3 at epitope 1) Comprises an Fc Domain for extension of half-life in vivo | SEQ ID NO:54 SEQ ID NO:17 SEQID NO:1 | SEQID NO:12 SEQ ID NO:18 SEQ ED NO:2 |
| Control Bi-Specific Diabody (Control DART (or Control DART) (Binds to CD3 at epitope 1) (Binds to an irrelevant target - FITC) | SEQ ED NO:19 SEQ ID NO:20 |
Example 2
Antibody Labeling Of Target Cells For Quantitative FACS (QFACS)
[00175] A total of 106 target cells were harvested from the culture, resuspended in 10% human AB sérum in FACS buffer (PBS + 1% BSA+ 0.1% NaAzide) and incubated for 5 min for blocking Fc receptors. Antibody labeling of microspheres with different antibody binding capacities (Quantum™ Simply Cellular® (QSC), Bangs Laboratories, Inc., Fishers, IN) and target cells were labeled with anti-CD 123 PE antibody (BD Biosciences) according to the manufacturer’s instructions. Briefly, one drop of each QSC microsphere was added to a 5 mL polypropylene tube and PE labeled-anti-CD123 antibody was added at 1 pg/mL concentration to both target cells and microspheres. Tubes were incubated in the dark for 30 minutes at 4 °C. Cells and microspheres were washed by adding 2mL FACS buffer and centrifuging at 2500 x G for 5 minutes. One drop of the blank microsphere population was added after washing. Microspheres were analyzed first on the flow cytometer to set the testspecific instrument settings (PMT voltages and compensation). Using the same instrument settings, géométrie mean fluorescence values of microspheres and target
- 5920146 cells were recorded. A standard curve of antibody binding sites on microsphere populations was generated from géométrie mean fluorescence of microsphere populations. Antibody binding sites on target cells were calculated based on géométrie mean fluorescence of target cells using the standard curve generated for microspheres in QuickCal spreadsheet (Bangs Laboratories).
[00176] To détermine suitable target cell lines for evaluating CD123 x CD3 bispecific diabodies, CD 123 surface expression levels on target lines Kasumi-3 (AML), Molml3 (AML), THP-1 (AML), TF-1 (Erythroleukemia), and RS4-11 (ALL) were evaluated by quantitative FACS (QFACS). Absolute numbers of CD 123 antibody binding sites on the cell surface were calculated using a QFACS kit. As shown in Table 3, the absolute number of CD 123 antibody binding sites on cell lines were in the order of Kasumi-3 (high) > MolmI3 (medium) > THP-1 (medium) > TF-1 (medium low) > RS4-11 (low). The three highest expressing cell fines were the AML cell fines: Kasumi-3, M0LM13, and THP-1. The non-AML cell lines: TF-1 and RS41 1 had medium-low / low expression of CDI23, respectively.
| Table 3 | |
| Target Cell Line | CD123 Surface Expression (Antibody Binding Sites) |
| Kasumi-3 | 118620 |
| Molml3 | 27311 |
| THP-1 | 58316 |
| TF-1 | 14163 |
| RS4-11 | 957 |
| A498 | Négative |
| HT29 | Négative |
Example 3
CTL Cytotoxicity Assay (LDH Release Assay)
[00177] Adhèrent target tumor cells were detached with 0.25% Trypsin-EDTA solution and collected by centrifugation at 1000 rpm for 5 min. Suspension target cell lines were harvested from the culture, washed with assay medium. The cell concentration and viability were measured by Trypan Blue exclusion using a Beckman Coulter Vi-Cell counter. The target cells were diluted to 4 xlO5 cells/mL in
-6020146 the assay medium. 50 pL of the diluted cell suspension was added to a 96-wcll Ubottom cell culture treated plate (BD Falcon Cat#353077).
[00178| Three sets of Controls to measure target maximal release (MR), antibody independcnt cellular cytotoxicity (AICC) and target cell spontancous release (SR) were set up as follows:
1)MR: 200 pL assay medium without CD123 x CD3 bi-specific diabodies and 50 pL target cells; detergent added at the end of the experiment to détermine the maximal LDH release.
2) AICC: 50 pL assay medium without CD123 x CD3 bi-specific diabodies, 50 pL target cells and 100 pL T cells.
3) SR: 150 pL medium without CD123 X CD3 bi-specific diabodies and pL target cells.
[00179] CD 123 X CD3 bi-specific diabodies (DART-A, DART-A w/ABD and DART-B) and Controls were initially diluted to a concentration of 4 pg/mL, and serial dilutions were then prepared down to a final concentration of 0.00004 ng/mL (Le., 40 fg/mL). 50 pL of dilutions were added to the plate containing 50 pL target cclls/wclL
[00180] Purified T cells were washed once with assay medium and resuspended in assay medium at cell density of 2 x 106 cells/mL. 2 x ΙΟ3 T cells in 100 pL were added to each well, for a final effector-to-target cell (E:T) ratio of 10:1. Plates were incubated for approximately 18hr at 37°C in 5% CO2.
[00181] Following incubation, 25 pL of lOx lysis solution (Promega # G182A) or 1 mg/mL digitonin was added to the maximum release control wells, mixed by pipetting 3 times and plates were incubated for 10 min to completely lyse the target cells. The plates were centrifuged at 1200 rpm for 5 minutes and 50 pL of supernatant were transferred from each assay plate well to a fiat bottom ELISA plate and 50 pl of LDH substrate solution (Promega #G1780) was added to each well. Plates were incubated for 10-20 min at room température (RT) in the dark, then 50 pL of Stop solution was added. The optical density (O.D.) was measured at 490 nm within 1 hour on a Victor2 Multilabel plate reader (Perkin Elmer #1420-014). The percent cytotoxicity
- 61 20146 was calculated as described below and dose-response curves were generated using GraphPad PRISM5® software.
[00182| Spécifie cell lysis was calculated from O.D. data using the following formula:
Cytotoxicity (%) = 100 x (OD of Sample - OD of AICC) / (OD of MR - OD of SR)
Redirected Killing of Target Cell Lines with Different Levels of CD123 Surface Levels:
[00183] The CD123 x CD3 bi-specific diabodies exhibited a potent redirected killing ability with concentrations required to achieve 50% of maximal activity (EC50s) in sub-ng/mL range, regardless of CD3 epitope binding specificity (DART-A versus DART-B) in target cell lines with high CD 123 expression, Kasumi-3 (EC50=0.01 ng/mL) (Figure 4 Panel D), medium CD123-expression, Molml3 (EC50=0.18 ng/mL) and THP-1 (EC50=0.24 ng/mL) (Figure 4, Panel C and E, respectively) and medium low or low CD123 expression, TF-1 (EC50=0.46 ng/mL) and RS4-11 (EC50=0.5 ng/mL) (Figure 4, Panel B and A, respectively). Similarly, CD 123 x CD3 bi-specific molécules mediated redirected killing was also observed with multiple target cell lines with T cells from different donors and no redirected killing activity was observed in cell lines that do not express CD123. Results are summarized in Table 4.
| Table 4 | |||
| Target cell line | CD123 surface expression (antibody binding sites) | EC50 of Sequenceoptimized CD123 x CD3 bi-specific diabodies (ng/mL) E:T=10:l | Max % killing |
| Kasumi-3 | 118620 | 0.01 | 94 |
| Molm 13 | 27311 | 0.18 | 43 |
| THP-1 | 58316 | 0.24 | 40 |
| TF-1 | 14163 | 0.46 | 46 |
| RS4-11 | 957 | 0.5 | 60 |
| A498 | Négative | No activity | No activity |
| HT29 | Négative | No activity | No activity |
[00184] Should it be necessary to replicate this example it will be appreciated that one of skill in the art may, within reasonable and acceptable limits, vary the above
-6220146 described protocol in a manner appropriate for replicating the described results. Thus, the exemplified protocol is not intended to be adhered to in a precisely rigid manner.
Example 4
T Cell Activation During Redirected Killing By Sequence-Optimized CD123 x CD3 Bi-Specifîc Diabodies (DART-A, DART-A w/ABD and DART-A w/Fc)
[00185] The sequence-optimized CD 123 x CD3 bi-specific diabodies exhibited a potent redirected killing ability regardless of the presence or absence of half-life extension technology (DART-A versus DART-A w/ABD versus DART-A w/Fc) in target cell lines with high CD123 expression, Kasumi-3, and medium, THP-1, CD123-expression, (Figure 5, Panels A and B, respectively) To characterize T cell activation during sequence-optimized CD 123 x CD3 bi-specific diabody mediated redirected killing process, T cells from redirected killing assays were stained for T cell activation marker CD25 and analyzed by FACS. As shown in Figure 5, Panel D, CD25 was up-regulated in CD8 T cells in a dose-dependent manner indicating that sequence-optimized CD 123 x CD3 bi-specific diabodies induce T cell activation in the process of redirected killing. Conversely, in the absence of target cells there is no activation of CD8 T cells (Figure 5, Panel C) indicating the sequence-optimized CD 123 x CD3 bi-specific diabodies do not activate T cells in the absence of target cells. Likewise, CD8 T cells are not activated when incubated with target cells and a control bi-specific diabody (Control DART) (Figure 5, Panel D) indicating the requirement of cross-linking the T cell and target cell with the sequence-optimized CD 123 x CD3 bi-specific diabodies.
Example 5 Intracellular Staining for Granzyme B and Perforin
[00186] To détermine the intracellular levels of granzyme B and perforin in T cells, a CTL assay was setup as described above. After approximately 18 h, cells from the assay plate were stained with anti-CD4 and anti-CD8 antibodies by incubating for 30 minutes at 4°C. Following surface staining, cells were incubated in 100 pL fixation and permeabilization buffer (BD BioScicnces) for 20 min at 4°C. Cells were washed with permeabilization/wash buffer (BD BioSciences) and incubated in 50 pL of granzyme B and a perforin antibody mixture (prepared in IX permeabilization/wash
-6320146 buffer) at 4°C for 30 minutes. Then cells were washed with 250 pL pcrmcabilization/wash buffer and resuspended in permeabilization/wash buffer for FACS acquisition.
Upregulation Of Granzyme B And Perforin By Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A) In T Cells During Redirected Killing
[00187] To investigate the possible mechanism for sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) mediated cytotoxicity by T cells, intracellular granzyme B and perforin levels were measured in T cells after the redirected killing. Dose-depcndcnt upregulation of granzyme B and perforin levels in both CD8 and CD4 T cells was observed following incubation of T cells and Kasumi-3 cells with DART-A (Figure 6, Panel A). Interestingly, the upregulation was almost two-fold higher in CD8 T cells compared to CD4 T cells (Figure 6, Panel A). When the assay was performed in the presence of granzyme B and perforin inhibitors no cell killing was observed. There was no upregulation of granzyme B or perforin in CD8 or CD4 T cells when T cells were incubated with Kasumi-3 target cells and a control bispecific diabody (Control DART) (Figure 5, Panel B). These data indicate that DART-A mediated target cell killing may be mediated through granzyme B and perforin mechanisms.
Example 6 in vivo Antitumor Activity Of Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A)
Isolation of PBMCs and T Cells from Human Whole Blood
[00188] PBMCs from healthy human donors were isolated from whole blood by using Ficoll gradient centrifugation. In brief, whole blood was diluted 1:1 with stérile PBS. Thirty-five mL of the diluted blood was layered onto 15 mL Ficoll-Paque™ Plus in 50-mL tubes and the tubes were centrifüged at 1400 rpm for 20 min with the brake off. The buffy coat layer between the two phases was collected into a 50 mL tube and washed with 45 mL PBS by centrifuging the tubes at 600 x g (1620 rpm) for 5 min. The supernatant was discarded and the cell pellet was washed once with PBS and viable cell count was determined by Trypan Blue dye exclusion. The PBMCs were resuspended to a final concentration of 2.5x106 cells/mL in complété medium
-6420146 (RPM1 1640, 10%FBS, 2 mM Glutamine, lOmM HEPES, ΙΟΟμ/ΙΟΟμ/mL penicillin/Streptomycin (P/S).
[00189) T cell isolation: Untouched T cells were isolated by négative sélection from PBMCs from human whole blood using Dynabeads Untouched Human T Cell isolation kit (Life Technologies) according to manufacturer’s instructions. After the isolation, T cells were cultured overnight in RPMI medium with 10% FBS, 1% penicillin/Streptomycin.
Tumor Model
[00190] Human T cells and tumor cells (Molml3 or RS4-11) were combined at a ratio of 1:5 (1 x 106 and 5 x 106, respectively) and suspended in 200 uL of stérile saline and injected subcutaneously (SC) on Study Day 0 (SD0). Sequence-optimized CD123 x CD3 bi-specific diabody (DART-A) or a control bi-specifïc diabody (Control DART) were administered intravenously (IV) via tail vein injections in 100 pL as outlined in Table 5 (MOLM13) and Table 6 (RS4-11).
| Table 5 Study Design for MOLM13 Model | |||
| Treatment Group | Dose (mg/kg) | Schedule | Number of Animais |
| Vehicle Control (MOLM-13 cells alone implanted or + T cells) | - | SD0, 1,2,3 | 8 |
| DART-A | 0.5 | SD0, 1,2,3 | 8 |
| DART-A | 0.2 | SD0, 1,2,3 | 8 |
| DART-A | 0.1 | SD0, 1,2,3 | 8 |
| DART-A | 0.02 | SD0, 1, 2, 3 | 8 |
| DART-A | 0.004 | SD0, 1,2,3 | 8 |
| DART-A | 0.0008 | SD0, 1, 2, 3 | 8 |
| DART-A | 0.00016 | SD0, 1,2,3 | 8 |
-6520146
| Table 6 Study Design for RS4-11 Model | |||
| Treatment Group | Dose (mg/kg) | Schedule | Number of Animais |
| Vehicle Control (RS4-11 cells alone implanted) | - | SD0, 1,2,3 | 8 |
| Vehicle Control (RS4-11 + T cells implanted) | - | SD0, 1,2,3 | 8 |
| Control DART | 0.2 | SD0, 1,2,3 | 8 |
| DART-A | 0.5 | SD0, 1,2, 3 | 8 |
| DART-A | 0.2 | SD0, 1,2, 3 | 8 |
| DART-A | 0.1 | SD0, 1,2, 3 | 8 |
| DART-A | 0.02 | SD0, 1,2,3 | 8 |
| DART-A | 0.004 | SD0, 1,2,3 | 8 |
Data Collection and Statistical Analysis:
[00191] Animal weights - Individual animal weights were recorded twice weekly until study completion beginning at the time of tumor cell injection.
[00192] Moribundity/Mortality - Animais were observed twice weekly for general moribundity and daily for mortality. Animal deaths were assessed as drug-related or tcchnical based on factors including gross observation and weight loss; animal deaths were recorded daily.
[00193] Tumor volume - Individual tumor volumes were recorded twice weekly beginning within one week of tumor implantation and continuing until study completion.
,, , , Length (mm)xwidth?
Tumor Volume mm ) =----—1'-----2
[00194] Animais experiencing technical or drug-related deaths were censored from the data calculations.
[00195] Tumor growth inhibition - Tumor growth inhibition (TGI) values were calculated for each group containing treated animais using the formula:
Mean Final Tumor Volume (Treated) - Mean Initial Tumor Volume (Treated)χ^θθ Mean Final Tumor Volume (Control) - Mean Initial Tumor Volume (Control)
- 6620146
[00196] Animais experiencing a partial or complété response, or animais experiencing technical or drug-related deaths were censored from the TGI calculations. The National Cancer Institute criteria for compound activity is TGI>58% (Corbett et al. (2004) Anticancer Drug Development Guide', Totowa, NJ: Humana 99-123).
[00197] Partial/Complete Tumor Response - Individual mice possessing tumors measuring less than 1mm3 on Day 1 were classified as having partial response (PR) and a percent tumor régression (%TR) value was determined using the formula:
. Final Tumor Volume (mm3) Initial Tumor Volume (mm’)
[00198] Individual mice lacking palpable tumors were classified as undergoing a complété response (CR).
[00199] Tumor Volume Statistics - Statistical analyses were carricd out between treated and control groups comparing tumor volumes. For these analyses, a two-way analyses of variance followed by a Bonferroni post-test were employed. Ail analyses were performed using GraphPad PRISM® software (version 5.02). Weight and tumor data from individual animais experiencing technical or drug-related deaths were censored from analysis. However, tumor data from animais reporting partial or complète rcsponscs were includcd in thèse calculations.
MOLM13 Results
[00200] The AML cell line M0LM13 was pre-mixed with activated T cells and implanted SC in NOD/SCID gamma (NSG) knockout mice (N = 8,zgroup) on SD0 as detailed above. The MOLM13 tumors in the vehicle-treated group (MOLM13 cells alone or plus T cells) demonstrated a relatively aggressive growth profile in vivo (Figure 7, Panels A and B). At SD8, the average volume of the tumors in the vehicle-treated group was 129.8 ± 29.5 mm3 and by SD15 the tumors had reached an average volume of 786.4 ± 156.7 mm3. By the end of the experiment on SD18, the tumors had reached an average volume of 1398.8 ± 236.9 mm3.
-6720146
[00201] Treatment with DART-A was initiated on the same day the tumor cell/T cell mixture was implanted [(SDO)] and proceeded subsequently with daily injections for an additional 7 days for a total of 8 daily injections. The animais were treated with DART-A at 9 dose levels (0.5, 0.2, 0.1, 0.02, and 0.004 mg/kg and 20, 4, 0.8 and 0.16 pg/kg). Results are shown in Figure 7, Panel A (0.5, 0.2, 0.1, 0.02, and 0.004 mg/kg) and Figure 7, Panel B (20, 4, 0.8 and 0.16 pg/kg). By Study Day 11, the growth of the M0LM13 tumors was significantly inhibited at the 0.16, 0.5, 0.2, 0.1, 0.02, and 0.004 mg/kg dose levels (p < 0.001). Moreover, the treatment of the MOLM13 tumor-bearing mice at the 20 and 4 pg/kg dose levels resulted in 8/8 and 7/8 CRs, respectively. By the end of the experiment on SD 18, the average volume of the tumors treated with DART-A at the 0.8 - 20 pg/kg) ranged from 713.6.0 ± 267.4 to 0 mm3, ail of which were significantly smaller than the tumors in the vehicle-treated control group. The TGI values were 100, 94, and 49% for the 20, 4, and 0.8 pg/kg dose groups, respectively. In comparison to the vehicle-treated MOLM13 tumor cell group, the groups that received DART-A at the 20 and 4 pg/kg dose level reached statistical significance by SD 15 while the group treated with 0.8 pg/kg reached signifïcance on SD 18.
RS4-11 Results
[00202] The ALL cell line RS4-11 was prc-mixed with activated T cells and implanted SC in NOD/SCID gamma knockout mice (N = 8/group) on SDO as detailed above. The RS4-11 tumors in the vehicle-treated group (RS4-11 cells alone or plus T cells) demonstrated a relatively aggressive growth profde in vivo (Figure 8).
[00203] Treatment with DART-A was initiated on the same day the tumor cell/T cell mixture was implanted [(SDO)] and proceeded subsequently with daily injections for an additional 3 days for a total of 4 daily injections. The animais were treated with DART-A at 5 dose levels (0.5, 0.2, 0.1, 0.02, and 0.004 mg/kg). Results are shown in Figure 8.
[00204] Sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) effectively inhibited the growth of both M0LM13 AML and RS4-11ALL tumors implanted SC in NOD/SCID mice in the context of the Winn model when dosing was
-6820146 initiated on the day of implantation and continued for 3 or more consecutive days. Based on the criteria established by the National Cancer Institute, DART-A at the O.l mg/kg dose level and higher (TGI >58) is considered active in the RS4-11 model and an DART-A dose of 0.004 mg/kg and higher was active in the MOLM13 model. The lower DART-A doses associated with the inhibition of tumor growth in the MOLM13 model compared with the RS4-11 model are consistent with the in vitro data demonstrating that MOLM 13 cells hâve a higher level of CD 123 expression than RS4-11 cells, which correlated with increased sensitivity to DART-A mediated cytotoxicity in vitro in MOLM 13 cells.
[00205] Should it be neccssary to replicate this example it will be appreciatcd that one of skill in the art may, within reasonable and acceptable limits, vary the abovedescribed protocol in a manner appropriate for replicating the described results. Thus, the cxemplificd protocol is not intended to be adhered to in a prcciscly rigid manner.
Example 7
CD123 Surface Expression On Leukemic Blast Cells And Stem Cells In Primary Tissue Sample From AME Patient 1
[00206] To define the CD 123 expression pattern in AML patient 1 primary samples, cryopreserved primary AML patient bonc marrow and PBMC samples were evaluated for CD 123 surface expression on leukemic blast cells.
[00207] AML Bone Marrow Sample - Clinical Report
Age: 42
Gender: Female
AML Subtype: M2
Cancer cell percentage based on morphology: 67.5%
Bone marrow immunophenotyping:
CD15=19%, CD33=98.5%, CD38=28.8%, CD45=81.8%, CD64=39.7%, CD117=42.9%, HLA-DR=17%, CD2=1.8%, CD5=0.53%, CD7=0.2%, CD10=0.41%, CD19=1.1%, CD20=1.4%, CD22=0.71% CD34=0.82%
-6920146
CD123 Expression in Leukemic Blast Cells in Bone Marrow Mononucleocytes (BM MNC)
[00208] A total of 0.5x106 bone marrow mononucleocytes (BM MNC) and peripheral blood mononucleocytes (PBMC)) from AML patient 1 were evaluated for CD 123 expression. The Kasumi-3 cell line wras included as a control. Leukemic blast cells were identifïed using the myeloid marker CD33. As shown in Figure 9, Panel A, 87% of the cells from AML bone marrow from patient 1 expressed CD 123 and CD33. CD 123 expression levels were slightly lower than the CD 123 high-expressing Kasumi-3 AML cell line (Figure 9, Panel B).
Example 8
Autologous CTL Killing Assay Using AML Patient Primary Specimens
[00209] Cryopreservcd primary AML specimen (bone marrow mononucleocytes (BMNC) and peripheral blood mononucleocytes (PBMC)) from AML patient 1 were thawed in RPMI 1640 with 10% FBS and allowed to rccover overnight at 37°C in 5% CO2. Cells were washed with assay medium (RPMI 1640+10%FBS) and viable cell count was determined by Trypan Bluc exclusion. 150,000 cells / well in 150 pL assay medium were added to 96-well U-bottom plate (BD Biosciences). Sequenceoptimized CD123 x CD3 bi-specific diabody (DART-A) was diluted to 0.1, and 0.01 ng/mL and 50 pL of each dilution was added to each well (final volume = 200 pL). Control bi-specific diabody (Control DART) was diluted to 0.1 ng/mL and 50 pL of each dilution was added to each well (final volume = 200 pL). A separate assay plate was set up for each time point (48, 72, 120 and 144 hours) and plates were incubated at 37 °C in a 5% CO2 incubator. At cach time point, cells wcrc staincd with CD4, CD8, CD25, CD45, CD33, and CD123 antibodies. Labeled cells were analyzed in FACS Calibur flow cytometer equipped with CellQuest Pro acquisition software, Version 5.2.1 (BD Bioscicnces). Data analysis was performed using Flowjo v9.3.3 software (Treestar, Inc).T cell expansion was measured by gating on CD4+ and CD8+ populations and activation was determined by measuring CD25 mean fluorescent intensity (MFI) on the CD4+ and CD8+ -gated populations. Leukemic blast ccll population was identifïed by CD45+CD33+ gating.
- 7020146
Autologous Tumor Cell Déplétion, T Cell Expansion And Activation By Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A) In Primary Specimens From AML Patient 1
[002101 To détermine the sequence-optmized CD 123 x CD3 bi-specific diabody (DART-A) mediatcd activity in AML patient 1, patient samples were incubated with 0.1 ng/mL or 0.01 ng/mL of DART-A and percentages of leukemic blast cells and T cells were measured at different time points following the treatment. Leukemic blast cells were identified by CD45+/CD33+ gating. Incubation of primary AML bone marrow samples with DART-A resulted in déplétion of the leukemic cell population over time (Figure 10, Panel A), accompanied by a concomitant expansion of the residual T cells (Figure 10, Panel B) and the induction of T cell activation markers (Figure 10, Panel C). In DART-A treated samples, T cells were expanded from around 7 % to around 80% by 120 hours. T cell activation measured by CD25 expression on CD4 and CD8 cells peaked at 72 h and dccrcased by the 120 h timepoint.
[00211] Should it be necessary to replicate this example it will be appreciated that one of skiil in the art may, within reasonable and acceptable limits, vary the abovedescribed protocol in a manner appropriate for replicating the described results. Thus, the exemplified protocol is not intended to be adhered to in a precisely rigid manner.
Example 9
CD123 Surface Expression On Leukemic Blast Cells And Stem Cells In Primary Tissue Sample From ALL Patient
[00212] To define the CD123 expression pattern in ALL patient primary samples, cryopreserved primary ALL patient PBMC sample was evaluated for CD 123 surface expression on leukemic blast cells.
CD123 Expression in Leukemic Blast Cells in Peripheral Blood Mononucleocytes (PBMC)
[00213] A total of 0.5xl06 peripheral blood mononucleocytes (PBMC)) from a healthy donor and an ALL patient were evaluated for CD 123 expression. As shown in Figure 11, Panels E-H, the vast majority of the cells from ALL bone marrow
- 71 20146 expressed CD 123. Conversely, as expected in the normal donor B cells are CD 123 négative and pDCs and monocytes are CD123 positive (Figure 11, Panel D).
[00214] The T cell population was identified in the ALL patent sample by staining the cells for CD4 and CD8. As shown in Figure 12, Panel B, only a small fraction of the total PBMCs in the ALL patient sample are T cells (approximately 0.5% are CD4 T cells and approximately 0.4% are CD8 T cells.
Example 10
Autologous CTL Killing Assay Using ALL Patient Primary Specimens
[00215] Cryopreserved primary ALL specimen (peripheral blood mononucleocytes (PBMC)) were thawed in RPM 11640 with 10% FBS and allowed to recover overnight at 37°C in 5% CO2. Cells were washed with assay medium (RPMI 1640+10%FBS) and viable cell count was determined by Trypan Blue exclusion. 150,000 cells / well in 150 qL assay medium were added to 96-well U-bottom plate (BD Bioscicnces). Sequence-optimized CD123 x CD3 bi-specific diabody (DART-A) was diluted to 10, 1 ng/mL and 50 pL of each dilution was added to each well (final volume = 200 pL). A separate assay plate was set up for each time point (48, 72, 120 and 144 hours) and plates were incubated at 37 °C in a 5% CO2 incubator. At each time point, cells were stained with CD4, CD8, CD25, CD45, CD33, and CD123 antibodies. Labeled cells were analyzed in FACS Calibur flow cytometer equipped with CellQucst Pro acquisition software, Version 5.2.1 (BD Biosciences). Data analysis was performed using Flowjo v9.3.3 software (Treestar, lnc).T cell expansion was measured by gating on CD4+ and CD8+ populations and activation was determined by measuring CD25 MFI on the CD4+ and CD8 -gated populations. Leukemic blast cell population was identified by CD45 CD33 gating.
Autologous Tumor Cell Déplétion, T Cell Expansion And Activation By Sequence-Optimized CD 123 x CD3 Bi-Specific Diabody (DART-A) In Primary Specimens From ALL Patients
[00216] To détermine the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) mediated activity in ALL patient primary patient samples, patient samples were incubated with 1 ng/mL of DART-A and percentages of leukemic blast cells and T cells were measured at different time points following the treatment. Leukemic
-7220146 blast cells were identified by CD45 /CD33 gating. Incubation of primary ALL bone marrow samples with DART-A resulted in déplétion of the leukemic cell population over time compared to untreated control or Control DART (Figure 13, Panel H versus Panels F and G). When the T cells were counted (CD8 and CD4 staining) and activation (CD25 staining) were assayed, the T cells expanded and were activated in the DART-A sample (Figure 14, Panels I and L, respectively) compared to untreated or Control DART samples (Figure 14, Panels H, G, K and J, respectively).
Example 11
CD123 Surface Expression On Leukemic Blast Cells And Stem Cells In Primary Tissue Sample From AML Patient 2
[00217] To define the CD 123 expression pattern in AML patient 2 primary samples, cryopreserved primary AML patient bone marrow and PBMC samples wrere evaluated for CD 123 surface expression on leukemic blast cells.
CD123 Expression in Leukemic Blast Cells in Bone Marrow Mononucleocytes (BMNC)
[00218] A total of 0.5x106 bone marrow mononucleocytes (BM MNC) and periphcral blood mononucleocytes (PBMC)) from an AML patient 2 were evaluated for leukemic blast cell identification. Leukemic blast cells were identified using the myeloid markers CD33 and CD45. As shown in Figure 15, Panel B, 94% of the cells from AML bone marrow are leukemic blast cells. The T cell population was identified by CD3 expression. As shown in Figure 15, Panel C, approximately 15% of the cell from the AML bone marrow and PBMC sample are T cells.
Example 12
Autologous CTL Killing Assay Using AML Patient 2 Primary Specimens
[00219] Cryopreserved primary AML specimen (bone marrow mononucleocytes (BM MNC) and periphcral blood mononucleocytes (PBMC)) from AML patient 2 were thawed in RPMI 1640 with 10% FBS and allowed to recover overnight at 37°C in 5% CO2. Cells were washed with assay medium (RPMI 1640+10%FBS) and viable cell count was determined by Trypan Blue exclusion. 150,000 cells / well in 150 pL assay medium were added to 96-well U-bottom plate (BD Biosciences). Sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) and control bi
-7320146 spécifie diabody (Control DART) were diluted to 0.1, and 0.01 ng/mL and 50 μΤ of each dilution was added to each well (final volume = 200 pL). A separate assay plate was set up for each time point (48, 72, 120 and 144 hours) and plates were incubated at 37 °C in a 5% CCh incubator. At each time point, cells were stained with CD4, CD8, CD25, CD45, CD33, and CD123 antibodies. Labeled cells were analyzed in FACS Calibur flow cytometcr equipped with CellQuest Pro acquisition software, Version 5.2.1 (BD Biosciences). Data analysis was performed using Flowjo v9.3.3 software (Treestar, Inc). T cell expansion was measured by gating on CD4+ and CD8+ populations and activation was determined by measuring CD25 MFI on the CD4+ and CD8+ -gated populations. Leukemic blast cell population was identified by CD45+CD33+ gating.
Autologous Tumor Cell Déplétion, T Cell Expansion and Activation in Primary Specimens from AML Patient 2
[00220] To détermine the sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) mediated activity in AML patient primary patient 2 samples, patient samples were incubated with 0.1 or 0.01 ng/mL of DART-A and percentages of leukemic blast cells and T cells were measured at different time points following the treatment. Incubation of primary AML bonc marrow samples with DART-A resulted in déplétion of the leukemic cell population over time (Figure 16, Panel A), accompanied by a concomitant expansion of the residual T cells (both CD4 and CD8) (Figure 16, Panel B and Figure 16, Panel C, respectively). To détermine if the T cells were activated, cells were stained for CD25 or K.i-67, both markers of T cell activation. As shown in Figure 17, Panels A and B, incubation of primary AML bone marrow samples with DART-A resulted in T cell activation. These data represent the 144h time point.
Intracellular Staining for Granzyme B and Perforin
[00221] To détermine the intracellular levels of granzyme B and Perforin in T cells, CTL assay was setup. After approximately 18 h, cells from the assay plate were stained with anti-CD4 and anti-CD8 antibodies by incubating for 30 minutes at 4 °C. Following surface staining, cells were incubated in 100 μΐ Fixation and Permeabilization buffer for 20 min at 4 ’C. Cells were washed with
- 7420146 permeabilization/wash buffer and incubated in 50 μΐ of granzyme B and perforin antibody mixture prepared in IX Perm/Wash buffer at 4 C for 30 minutes. Then cells were washed with 250 μΐ Perm/Wash buffer and resuspended in Perm/Wash buffer for FACS acquisition.
Upregulation Of Granzy me B And Perforin By Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A) In T Cells During Redirected Killing.
[00222] To investigate the possible mechanism for sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) mediated cytotoxicity by T cells, intracellular granzyme B and perforin Icvcls were measured in T cells after the redirected killing. There was no upregulation of granzyme B and perforin when T cells were incubated with control bi-specific diabody (Control DART). Upregulation of granzyme B and perforin Icvcls in both CD8 and CD4 T cells was observed with scqucnce-optimizcd CD 123 x CD3 bi-specific diabody (DART-A) (Figure 17, Panels C and D). Interestingly, the upregulation was almost two-fold higher in CD8 T cells compared to CD4 T cells (Figure 17, Panel C and Figure 17, Panel D). These data indicate that DART-A-mediated target cell killing was mediated through granzyme B and perforin pathway.
Example 13 Sequence-Optimized CD123 x CD3 Bi-Specific Diabody Cross-Reacts With NonHuman Primate CD123 And CD3 Proteins.
[00223] In order to quantitate the extent of binding between sequence-optimized CD 123 x CD3 bi-specific diabody (DART-A) and human or cynomolgus monkey CD3, BIACORE™ analyses were conducted. BIACORE™ analyses measure the dissociation off-rate, kd. The binding affinity (KD) between an antibody and its target is a function of the kinetic constants for association (on rate, ka) and dissociation (off-rate, kd) according to the formula: KD = [kd]/[ka], The BIACORE™ analysis uses surface plasmon résonance to directly measure these kinetic parameters. Recombinant human or cynomolgus monkey CD3 was directly immobilized to a support. Purified human or cynomolgus monkey CD 123 was captured and immolbilized to a support. The time course of dissociation was measured and a bivalent fit of the data conducted. Binding constants and affinity were obtained using a 1:1 binding fit. The results of the BIACORE™ analyses comparing binding to
-75 2 I i
human versus cynomologus monkey CD 123 and CD3 proteins are shown in Figure 18. Binding affinities to the cynomolgus monkey CD 123 (Figure 18D) and CD3 (Figure 18B) proteins is comparable to binding affinities for human CD 123 (Figure 18C) and CD3 (Figure 18A) proteins.
Example 14 Autologus Monocyte Déplétion In Vitro With Human And Cynomolgus Monkey PBMCs
[00224] PBMCs from human or cynomolgus monkey whole blood samples were added to U-bottom plates at cell density of 200,000 cells/well in 150 pL of assay medium. Dilutions of sequence-optimized CD 123 x CD3 bi-specific diabodies (DART-A or DART-A w/ABD) were prepared in assay medium. 50 pL of each DART-A or DART-A w/ABD dilution was added to the plate containing PBMCs in duplicate wells. The plates were incubated for ~ 18 - 24 h at 37°C. Supematants were used to déterminé the cytotoxicity as described above. As shown in Figure 19 (Panels A and B), déplétion of pDCs cells was observed in both human (Figure 19, Panel A) and cynomolgus monkey PBMCs (Figure 19, Panel B). These results indicate that circulating pDC can be used as a pharmacodynamie marker for preclinical toxicology studies in cynomolgus monkeys.
[00225] Should it be necessary to replicate this cxample it will be apprcciatcd that one of skill in the art may, within reasonable and acceptable limits, vary the abovedescribed protocol in a manner appropriate for replicating the described results. Thus, the exemplified protocol is not intended to be adhered to in a prcciscly rigid manner.
Example 15
Plasmacytoid Dendritic Cell Déplétion In Cynomolgus Monkeys Treated With Sequence-Optimized CD123 x CD3 Bi-Specific Diabody (DART-A)
[00226] As part of a dose-range finding toxicology study, cynomolgus monkeys were administered sequence-optimized CD123 x CD3 bi-specific diabody (DART-A) as 4day infusions at doses of 0.1, 1, 10, 30 100, 300, or 1000 ng/kg . The Control DART was administered at 100 ng/kg. To identify pDCs and monocyte populations in cynomolgus monkey PBMCs, cells were labeled with CD14-FITC antibody. Monocytes were identified as the CD14+ population and pDCs were identified as the
-76I
CD14 CD123 population. As shown in Figure 20 Panels K and L, the pDCs were depleted as early as 4 days post infusion with as little as 10 ng/kg DART-A. No pDC déplétion was seen in the control bi-specific diabody-(Control DART) treated monkeys or the vehicle + carrier-treated monkeys at the 4d time point (Figure 20, Panels G, H, C and D, respectively). Cytokine levels of interferon-gamma,TNFalpha, IL6, IL5, IL4 and IL2 were determined at 4 hours after infusion. There was little to no élévation in cytokine levels at the DART-A treated animais compared to Control DART or vehicle-treated animais.
[00227] Figure 21 and Figure 22 provide the results of the FACS analysis for B cells (CD20+) (Figure 21, Panel A), monocytes (CD14+) (Figure 21, Panel B), NK cells (CD159+CD16 ) (Figure 21, Panel C), pDC (CD123HI, CD14) (Figure 21, Panel D), and T cells (total, CD4, and CD84) (Figure 22, Panel A, Figure 22, Panel B, and Figure 22, Panel D, respectively).
[00228] Treatment of monkeys with Control DART had no noticeable effects on T or B lymphocytes, NK cells, monocytes and pDCs. Treatment of monkeys with DARTA at doses of 10 ng/kg/d or higher resulted in the abrogation of pDCs (Figure 21, Panel D). The déplétion of pDC was complété and durable, retuming to pre-dose levels several weeks after completion of dosing. Circulating levels of T lymphocytes decreased upon DART-A administration, but retumed to pre-dose level by the end of each weekly cycle, suggesting changes in trafficking rather than true déplétion. Both CD4 and CD8 T lymphocytes followed the same pattern. The T-lymphocyte activation marker, CD69 (Figure 22, Panel C), was only marginally positive among circulating cells and did not track with DART-A dosing. B lymphocytes, monocytes and NK cells fluctuated over the course of DART-A dosing with substantial variability observed among monkeys. A trend toward increased circulating levels of B lymphocytes and monocytes was observed in both monkeys at the highest doses.
[00229] In summary, the above results demonstrate the therapeutic efficacy of the sequence-optimized CD123 x CD3 bi-specific diabody (DART-A). The sequenceoptimized CD 123 x CD3 bi-specific diabody (DART-A) may be employed as a therapeutic agent for the treatment of multiple diseases and conditions, including:
-77 •t ri l‘
AML, ABL (ALL), CLL, MDS, pDCL, mantel cell leukemia, hairy cell leukemia, Ricter transformation of CLL, Blastic crisis of CML, BLL (subset are CD 123+) (see Example 2); Autoimmune Lupus (SLE), allergy (basophils are CD123+), asthma, etc.
Example 16
Comparative Properties of Sequence-Optimized CDI23 x CD3 Bi-Specific Diabody (DART-A) and Non-Sequence-Optimized CD123 xCD3 Bi-Specific Diabody (DART-B)
Unexpected Advantage and Attributes of the Sequence-Optimized CD123 x CD3 Bi-Specific Diabodies
[00230] As discussed above, DART-A and DART-B are similarly designed and the first polypeptide of both constructs comprise, in the N-terminal to C-terminal direction, an N-terminus, a VL domain of a monoclonal antibody capable of binding to CD3 (VLcdt), an intervening linker peptide (Linker 1), a VH domain of a monoclonal antibody capable of binding to CD 123 (VHcdi23), a Linker 2, an E-coil Domain, and a C-terminus. Likewise, the second polypeptide of both constructs comprise, in the N-terminal to C-terminal direction, an N-terminus, a VL domain of a monoclonal antibody capable of binding to CD123 (VLcdi23), an intervening linker peptide (Linker 1), a VH domain of a monoclonal antibody capable of binding to CD3 (VHcd3). a Linker 2, a K-coil Domain and a C-terminus.
[00231] As indicated in Example 1, both CD123 x CD3 bi-specific diabodies were found to be capable of simultaneously binding to CD3 and CD123. Additionally, as disclosed in Example 3 and in Figure 4, Panels C and D, the two CD 123 x CD3 bispecific diabodies exhibited a potent redirected killing ability with concentrations required to achieve 50% of maximal activity (EC50s) in sub-ng/mL range, regardless of CD3 epitope binding specificity (DART-A versus DART-B) in target cell lines with high CD 123 expression. Thus, slight variations in the spécifie sequences of the CD 123 x CD3 bi-specific diabodies do not completely abrogate biological activity.
[00232] However, in ail cell lines tested, DART-A was found to be more active and more potent at redirected killing than DART-B (see, e.g., Figure 4, Panels A, C, and D). Thus DART-A exhibited an unexpected advantage over similar DART-B.
-7820146
Example 17
Non-Human Primate Pharmacology of DART-A for the Treatment of Hematological Malignancies
100233| The interleukin 3 (1L-3) receptor alpha chain, CD 123, is overexpressed on malignant cells in a wide range of hematological malignancies (Munoz, L. et al. (2001) “Interleukin-3 Receptor Alpha Chain (CD123) Is Widely Expressed In Hématologie Malignancies,” Haematologica 86:1261-1269; Testa, U. et al. (2014) “CD 123 Is A Membrane Biomarker And A Therapeutic Target In Hématologie Malignancies,” Biomark. Res. 2:4) and is associated with poor prognosis (Vergez, F. et al. (2011) “High Levels Of CD34+CD38low/-CD123+ Blasts Are Prédictive Of An Adverse Outcome In Acute Myeloid Leukemia: A Groupe Ouest-Est Des Leucemies Aigues Et Maladies Du Sang (GOELAMS) Study,” Haematologica 96:1792-1798). Moreover, CD 123 has been reported to be expressed by leukemia stem cells (LSC) (Jordan, C.T. et al. (2000) “The Interleukin-3 Receptor Alpha Chain Is A Unique Marker For Human Acute Myelogenous Leukemia Stem Cells,” Leukemia 14:17771784; Jin, L. et al. (2009) “Monoclonal Antibody-Mediated Targeting Of CD123, IL-3 Receptor Alpha Chain, Eliminâtes Human Acute Myeloid Leukemic Stem Cells,” Cell Stem Cell 5:31-42), which is an attractive feature that enables targeting the root cause of such diseases. Consistent with this conclusion, CD 123 also takes part in an IL-3 autocrine loop that sustains leukemogenesis, as shown by the ability of a CD 123blocking monoclonal antibody to reduce leukemic stem cell engraftment and improve survival in a mouse model of acute myelogenous leukemia (AML) (Jin, L. et al. (2009) “Monoclonal Antibody-Mediated Targeting Of CD123, IL-3 Receptor Alpha Chain, Eliminâtes Human Acute Myeloid Leukemic Stem Cells,” Cell Stem Cell 5:3142). In a phase 1 study in high-risk AML patients, however, the monoclonal antibody exhibited no anti-leukemic activity (Roberts, A. W. et al. (2010) “A Phase I Study Of Anti-CD123 Monoclonal Antibody (mAb) CSL360 Targeting Leukemia Stem Cells (LSC) In AML,” J. Clin. Oncol. 28(Suppl):el3012). Thus, alternate CD123-targeting approaches, including depleting strategies are desired. Although CD123 is expressed by a subset of normal hematopoietic progenitor cells (HPC), hematopoietic stem cells (HSC) express little to no CD123 (Jordan, C.T. et al. (2000) “The Interleukin-3 Receptor Alpha Chain Is A Unique Marker For Human Acute Myelogenous Leukemia Stem Cells,” Leukemia 14:1777-1784; Jin, W. et al. (2009) “Régulation OfThl7 Cell
-Ί920146
Différentiation And EAE Induction By MAP3K NIK,” Blood 113:6603-6610), indicating that CD 123 cell-depleting strategies allow reconstitution via normal hematopoiesis.
[00234] Enabling a paticnt’s own T lymphocytes to target leukemie cells represents a promising immunotherapeutic strategy for the treatment of hematological malignancies. The therapeutic potential of this approach has been attempted using blinatumomab (a bi-specific antibody-based BiTE having the ability to bond CD3 and the B cell CD 19 antigen) in patients with B cell lymphomas and B-precursor acute lymphoblastic leukemia (Klinger, M. et al. (2012) Hmmunopharmacologic Response Of Patients With B-Lineage Acute Lymphoblastic Leukemia To Continuons Infusion Of T Cell-Engaging CD19/CD3-Bispecific BiTE Antibody Blinatumomab,” Blood 119:6226-6233; Topp, M.S. et al. (2012) Long-Term Follow-Up Of Hématologie Relapse-Free Survival In A Phase 2 Study Of Blinatumomab In Patients With MRD In B-Lineage ALL,” Blood 120:5185-5187; Topp, M.S. et al. (2011) “Targeted Therapy With The T-Cell-Engaging Antibody Blinatumomab Of Chemotherapy-Refractory Minimal Residual Disease In B-Lineage Acute Lymphoblastic Leukemia Patients Results In High Response Rate And Prolonged Leukemia-Free Survival,” J. Clin. Oncol. 29:2493-2498).
[00235] The CD 123 x CD3 bi-specific diabody molécules of the présent invention, such as DART-A, comprise an alternate bi-specific, antibody-based modality that offers improved stability and more robust manufacturability properties (Johnson, S. et al. (2010) Effector Cell Recruitment With Novel Fv-Based Dual-Affinity ReTargeting Protein Leads To Potent Tumor Cytolysis And In Vivo B-Cell Déplétion,” J. Mol. Biol. 399:436-449; Moore, P.A. et al. (2011) Application Of Dual Affînity Retargeting Molécules To Achieve Optimal Redirected T-Cell Killing Of B-Cell Lymphoma,” Blood 117:4542-4551).
[00236] In order to demonstrate the superiority and effectiveness of the CD 123 x CD3 bi-specific diabody molécules of the présent invention, the biological activity of the above-described DART-A in in vitro and preclinical models of leukemia was confirmed, and its pharmacokinetics, pharmacodynamies and safety pharmacology in
cynomolgus macaques (Macaca fascicularis) was assessed relative to either the above-described Control DART (bi-specific for CD3 and fluorescein) or a “Control DART-2” that was bi-specific for CD123 and fluorescein).
Amino Acid Sequence of First Polypeptide Chain of “Control DART-2” (CD123VL — Linker — 4-4420VH — Linker — E-coil; linkers are underlined) (SEQ ID NO:58):
DFVMTQSPDS KLLIYWASTR PYTFGQGTKL SDYWMNWVRQ SVYLQMNNLR EKEVAALEKE
LAVSLGERVT ESGVPDRFSG EIKGGGSGGG SPEKGLEWVA VEDMGIYYCT VAALEKEVAA
MSCKSSQSLL SGSGTDFTLT GEVKLDETGG QIRNKPYNYE GSYYGMDYWG LEK
NSGNQKNYLT ISSLQAEDVA GLVQPGRPMK TYYSDSVKGR QGTSVTVSSG
WYQQKPGQPP VYYCQNDYSY LSCVASGFTF FTISRDDSKS GCGGGEVAAL
Amino Acid Sequence of Second Polypeptide Chain of “Control DART-2” (4420VL - Linker- CD123VH — LÎnker - K-coil) (SEQ ID NO:59):
DVVMTQTPFS LPVSLGDQAS ISCRSSQSLV HSNGNTYLRW YLQKPGQSPK VLIYKVSNRF SGVPDRFSGS GSGTDFTLKI SRVEAEDLGV YFCSQSTHVP WTFGGGTKLE IKGGGSGGGG EVQLVQSGAE LKKPGASVKV SCKASGYTFT DYYMKWVRQA PGQGLEWIGD IIPSNGATFY NQKFKGRVTI TVDKSTSTAY MELSSLRSED TAVYYCARSH LLRASWFAYW GQGTLVTVSS GGCGGGKVAA LKEKVAALKE KVAALKEKVA ALKE
Bifunctional ELISA
[00237] A MaxiSorp ELISA plate (Nunc) coated overnight with the soluble human or cynomolgus IL3R-alpha (0.5 pg/mL) in bicarbonate buffer was blocked with 0.5% BSA; 0.1% Tween-20 in PBS (PBST/BSA) for 30 minutes at room température. DART-A molécules were applied, followed by the sequential addition of human CD3ed-biotin and Streptavidin HRP (Jackson ImmunoResearch). HRP activity was detected by conversion of tetramethylbenzidine (BioFX) as substrate for 5 min; the reaction was terminated with 40pL/well of 1% H2SO4 and the absorbance read at 450 nm.
Surface Plasmon Résonance Analysis
[00238] The ability of DART-A to bind to human and cynomolgus monkey CD3 or CD 123 proteins was analyzed using a BIAcore 3000 biosensor (GE, Healthcare) as described by Johnson, S. et al. (2010) (“Effector Cell Recruitment With Novel FvBased Dual-Affinity Re-Targeting Protein Leads To Patent Tumor Cytolysis And In
Vivo B-Cell Déplétion,” J. Mol. Biol. 399:436-449) and Moore, P.A. et al. (2011) (“Application Of Dual A ffinity Retargeting Molécules To Achieve Optimal Redirected T-Cell Killing Of B-Cell Lymphoma,” Blood 117:4542-4551). Briefly, the carboxyl groups on the CM5 sensor chip were activated with an injection of 0.2M N-ethyl-N(3dietylamino-propyl) carbodiimide and 0.05M N-hydroxy-succinimide. Soluble CD3 or CD 123 (Ipg/ml) was injected over the activated CM5 surface in lOmM sodium-acetate, pH 5.0, at flow rate 5 pL/min, followed by 1 M ethanolamine for deactivation. Binding experiments were performed in 10mM HEPES, pH 7.4, 150mM NaCl, 3mM EDTA and 0.005% P20 surfactant. Régénération of the immobilized receptor surfaces was performed by puise injection of 10mM glycine, pH 1.5. KD values were determined by a global fit of binding curves to the Langmuir 1:1 binding model (BIAevaluation software v4.1).
Cell Killing Assay
[00239] Cell lines used for cell killing assays were obtained from the American Type Culture Collection (ATCC) (Manassas, VA). PBMCs were isolated from healthy donor blood using the Ficoll-Paque Plus kit (GE Healthcare); T cells were purified with a négative sélection kit (Life Technologies). CD123 cell-surface density was determined using Quantum Simply Cellular beads (Bangs Laboratories, Inc., Fishers, IN). Cytotoxicity assays wcrc performed as described by Moore, P.A. et al. (2011) (“Application OfDual A ffinity Retargeting Molécules To Achieve Optimal Redirected T-Cell Killing Of B-Cell Lymphoma,” Blood 117:4542-4551). Briefly, target cell lines (105 cells/mL) were treated with serial dilutions of DART-A or Control DART proteins in the presence of T cells at the indicated effector cells:target cells ratios and incubated at 37°C overnight. Cell killing was determined as the release of lactate dehvdrogcnasc (LDH, Promega) in culture supematant. For flow-bascd killing, target cells were labeled with CMTMR (Life Technologies) and cell killing was monitored using a FACSCalibur flow cytometer. Data were analyzed by using PR1SM® 5 software (GraphPad) and presented as percent cytotoxicity.
-8220146
Cynomolgus Monkey Pharmacology
[00240] Non-human primate experiments were performed at Charles River Laboratories (Rcno, NV), according to the guidelines of the local Institutional Animal Care and Use Committee (IACUC). Purpose-bred, naïve cynomolgus monkeys (Macaca fascicularis) of Chinese origin (âge range 2.5-9 years, weight range of 2.7-5 kg) were provided with vehicle or DART-A via intravenous infusion through fémoral and jugular ports using battery-powered programmable infusion pumps (CADDLegacy®, S1MS Deltec, Inc., St. Paul, MN). Peripheral blood or bone marrow samples were collected in anticoagulant containing tubes at the indicated time points. Cell-surface phenotype analyses were performed with an LSR Fortessa analyzer (BD Biosciences) equipped with 488nm, 640nm and 405nm lasers and the following antibodies: CD4-V450, CD8-V450, CD123-PE-Cy7, CD45-PerCP, CD4-APC-H7, CD8-FITC, CD25-PE-Cy7, CD69-PerCP, PD-l-PE, TIM3-APC, CD3-Pacific Blue, CD95-APC, CD28-BV421, CD16-FITC, CD3-Alexa488, CD38-PE, CD123-PE-Cy7, CDU7-PerCP-Cy5.5, CD34-APC, CD90-BV421, CD45RA-APC -H7 and CD33APC (BD Biosciences). The absolute number of cells was determined using TruCOUNT (BD Biosciences). Sérum levels of IL-2, IL-4, IL-5, IL-6, TNF-α, and IFN-γ cytokines were measured with the Non-Human Primate Thl/Th2 Cytokine Cytométrie Bead Array Kit (BD Bioscience). The concentration of DART-A in monkey sérum samples was measured using a sandwich immunoassay with electrochemiluminescence détection (MesoScale Diagnostics, MSD, Rockville, MD). Briefly, the assay plate (MSD) was coated with recombinant human IL-3 Ra (R&D System) and blocked with 5 % BSA. Calibration standards or diluted test samples were applied, followed by the addition of a biotinylated monoclonal antibody exhibiting spécifie binding for the above-described E-coil (SEQ ID NO:34) and Kcoil (SEQ ID NO:35) domains of the molécule A SULFO-TAG™ labeled streptavidin conjugate (MSD) was added and the formation of complexes was analyzed in an MSD SECTOR® imager. DART-A concentrations were determined from standard curves generated by fitting light intensity data in a fîve-parameter logistic model.
- 83 20146
[00241] Physicochemical characterization of the purified DART-A demonstrated a homogeneous heterodimer with a molecular mass of 58.9 kDa (Figure 23; Figures 24A-24B), which was stable at 2-8°C for up to 12 months in PBS. SPR analysis demonstrated nearly identical binding affinities of DART-A to the corresponding soluble human and cynomolgus monkey CD3 and CD123 antigens (Figures 25A-25D and Table 7). Furthermore, DART-A simultaneously bound both antigens in an ELISA format that employed human or monkey CD 123 for capture and human CD3 for détection (Figures 26A-26B), and demonstrated similar binding to human and monkey T lymphocytes (Figures 26C-26E). The data in Table 7 are averages of 3 independent experiments each performed in duplicates.
| Table 7 Equilibrium Dissociation Constants (KD) for the Binding of DART-A to Human and Cynomolgus Monkey CD3 and CD 123 | |||
| Antigens | ka(±SD) (mV*) | kd (± SD) (S1) | Kn(±SD) (nM) |
| Human CD3e/Ô | 5 5.7 (± 0.6) x 10 | 5.0 (± 0.9) x 10 3 | 9.0 ±2.3 |
| Cynomolgus CD3s/Ô | 5.5 (±0.5)x 105 | 5.0 (± 0.9) x 10’3 | 9.2 ±2.3 |
| Human CD123-His | 1.6 (± 0.4) x 106 | 1.9 (±0.4) x IO’4 | 0.13 ± 0.01 |
| Cynomolgus CD123-His | 1.5 (±0.3)x 106 | 4.0 (± 0.7) x 104 | 0.27 ±0.02 |
DART-A Médiates Redirected Killing by Human or Cynomolgus Monkey T Lymphocytes
[00242] DART-A mediated redirected target cell killing by human or monkey effector cells against CD 123+ Kasumi-3 leukemic cell lines (Figure 27A-27D), which was accompanied by induction of activation markers. No activity was observed against CD123-negative targets (U937 cells) or with Control DART, indicating that T cell activation is strictly dépendent upon target cell engagement and that monovalent engagement of CD3 by DART-A was insufficient to trigger T cell activation. Since CD 123 is expressed by subsets of normal circulating leukocytes, including pDCs and monocytes (Figure 27E), the effect of DART-A were further investigated in normal human and monkey’s PBMCs.
- 8420146
[00243] A graded effect was observed among human PBMC, with a dose-dependent rapid déplétion of CD14'CDl23hlsh cells (pDC and basophils) observed as early as 3 hours following initiation of treatment, while monocytes (CD 14+ cells) remained unaffected at this time point (Figures 27F-27G). CD14‘CD123hish cells déplétion increased over time across ail DART-A molécule concentrations, while monocytes were slightly decreased by 6 hours and depleted only after 18 hours and at the concentrations higher than 1 ng/mL. Incubation of monkey PBMCs with DART-A resulted in a comparable dose-dependent déplétion of CD14'CD123hlsh cells (Figure 27H), further supporting the relevance of this species for DART-A pharmacology (CD14+ monkey cells express little to no CD123 and were not depleted).
Pharmacokinetics of DART-A in Cynomolgus Monkeys
[00244] The cynomolgus monkey was selected as an appropriate pharmacological model for DART-A analysis based on the équivalent distribution of both target antigens in this species compared to humans based on immunohistochemistry with the precursor mAbs, consistent with published information (Munoz, L. et al. (2001) “Interleukin-3 Receptor Alpha Chain (CD 123) Is Widely Expressed In Hématologie Malignancies,” Haematologica 86:1261-1269; Korpelainen, E.I. et al. (1996) “1L-3 Receptor Expression, Régulation And Function In Cells OJ The Vasculature,” Immunol. Cell Biol. 74:1-7).
[00245] The study conducted in accordance with the présent invention included 6 treatment groups consisting of 8 cynomolgus monkeys per group (4 males, 4 females) (Table 8). Ail groups received vehicle control for the first infusion; then vehicle or DART-A were administered intravenously for 4 weekly cycles. Group 1 animais received vehicle control for ail 4 subséquent infusions, whereas Groups 2-5 received weekly escalating doses of DART-A for 4 days a week for ail subséquent infusions. Group 6 animais were treated with 7-day uninterrupted weekly escalating doses of DART-A for ail infusions. The 4-day-on/3-day-off and 7-day-on schedules were designed to distinguish between durable from transient effects associated with DARTA administration. Two males and 2 females per group were sacrificed at the end of the treatment phase (Day 36), while the remaining monkeys were necropsied after a 4
-851 week recovery (Day 65). A subset of monkeys developed anti-drug antibodies (ADA) directed against the humanized Fv of both CD3 and CD 123 and the data points following the appearance of ADA were excluded from the PK analysis. Ail monkeys were exposed to DART-A during the study period.
| Table 8 | |||||||
| Infusion No. | Study Days | Vehicle | DART-A Infusion | ||||
| (4-day-on/3-day-off) ng/kg/day [ng/kg/4 days]______________ | (7-day-on) ng/kg/day [ng/kg/7days] | ||||||
| Group 1 | Group 2 | Group 3 | Group 4 | Group 5 | Group 6 | ||
| 1 | 1 | Vehicle | Vehicle | Vehicle | Vehicle | Vehicle | Vehicle |
| 2 | 8 | Vehicle | 100 [400] | 100 [400] | 100 [400] | 100 [400] | 100 [700] |
| 3 | 15 | Vehicle | 100 [400] | 300 [1200] | 300 [1200] | 300 [1200] | 300 [2100] |
| 4 | 22 | Vehicle | 100 [400] | 300 [1200] | 600 [2400] | 600 [2400] | 600 [4200] |
| 5 | 29 | Vehicle | 100 [400] | 300 [1200] | 600 [2400] | 1000 [4000] | 1000 [7000] |
| Recovery | 36-65 |
[00246] A two-compartment model was used to estimate PK parameters (Table 9 and Figure 28). Ti/2a was short (4-5min), reflecting rapid binding to circulating targets; Τι/2β was also rapid, as expected for a molécule of this size, which is subject to rénal clearance. Analysis of sérum samples collected at the end of each infusion from group 6 monkeys showed a dose-dependent incrcasc in DART-A Cmax· In Table 9, Vehicle was PBS, pH 6.0, containing 0.1 mg/mL recombinant human albumin, 0.1 mg/mL PS80, and 0.24 % benzyl alcohol was used for ail vehicle infusions during the first 4 days of each infusion week followed the same formulation without benzyl alcohol for the remaining 3 days of each weekly infusion. DART-A was administered for the indicated times as a continuous IV infusion of a solution of PBS, pH 6.0, containing 0.1 mg/mL recombinant human albumin, 0.1 mg/mL PS-80, and 0.24 % benzyl alcohol at the required concentration.
-8620146
| Table 9 Two-Compartment Analysis of PK Parameters of DART-A in Cynomolgus Monkeys | ||
| Attribute | 300 ng/kg/d (mean ± SD) | 600 ng/kg/d (mean ± SD) |
| Cmax (pg/mL) | 77.4 ±9.4 | 113.8 ± 33.5 |
| AUC (h*pg/mL) | 7465 ±913 | 11188±3282 |
| Vss(L/kg) | 1.078 ±0.511 | 2.098 ± 1.846 |
| tV2, alpha (h) | 0.07 ±0.018 | 0.067 ±0.023 |
| tl/2, beta (h) | 13.79 ±4.928 | 21.828 ± 18.779 |
| MRT (h) | 6.73 ±3.327 | 9.604 ±8.891 |
Cytokine Release in DART-A-Treated Cynomolgus Monkeys
[00247] Given the T cell activation properties of DART-A, an increase in circulating cytokines accompanying the infusion was anticipated and a low starting dose was therefore used as a “desensitization” strategy, based on previous expérience with similar compounds (see, e.g., Topp, M.S. et al. (2011) “Targeted Therapy With The TCelLEngaging Antibody Blinatumomab Of Chemotherapy-Refractory Minimal Residual Disease In B-Lineage Acute Lymphoblastic Leukemia Patients Results In High Response Rate And Prolonged Leukemia-Free Survival,” J. Clin. Oncol. 29:2493-2498; Bargou, R. et al. (2008) “Tumor Régression In Cancer Patients By Very Low Doses Of A T Cell-Engaging Antibody,” Science 321:974-977). Of the cytokine tested, IL-6 demonstrated the largest changes upon infusion, albeit transient in nature, of minimal magnitude and with large inter-animal and inter-group variations (Figures 29A-29C). Small, transient increases in IL-6 were also observed after vehicle infusions (ail Group 1 and ail Day 1 infusions), indicating a sensitivity of this cytokine to manipulative stress. Nonetheless, DART-A-dependent increases (<80pg/mL) in sérum IL-6 were seen in some monkeys following the first DART-A infusion (lOOng/kg/day), which returned to baseline by 72 hours. Interestingly, the magnitude of IL-6 release decreased with each successive DART-A infusion, even when the dose level was increased to up to 1000 ng/kg/day. Minimal and transient DART-A-related increases in sérum TNF-α (<10pg/mL) were also observed; as with IL-6, the largest magnitude in TNF-α release was observed following the first infusion. There were no DART-A-related changes in the levels of IL-5, IL-4, IL-2, or IFN-γ throughout the study when compared with Controls. In conclusion, cytokine
- 8720146 release in response to treatment of monkeys with DART-A was minimal, transient and represented a first-dose effect manageable via intra-subject dose escalation.
DART-A-Mediated Déplétion of Circulating CD147CD123+ Leukocytes in vivo
[00248] The circulating absolute levels of CD14-/CD123+ cells were measured throughout the study as a pharmacodynamie endpoint. While the number of CD 123 ' cells in control Group 1 remained stable over time, DART-A treatment was associated with extensive déplétion of circulating CD14-/CD123+ cells (94-100% from prestudy baseline) observable from the first time point measured (72 hours) following the start of the first DART-A infusion (100 ng/kg/day) in ail animais across ail active treatment groups (Figures 30A-30C). The déplétion was durable, as it persisted during the 3-day weekly dosing holiday in Group 2-5, retuming to baseline levels only during the prolonged recovery period. To eliminate the possibility of DART-A masking or modulating CD 123 (an unlikely scénario, given the low circulating DART-A levels), pDCs were enumerated by the orthogonal marker, CD303. Consistent with the CD 123 data, CD303+ pDC were similarly depleted in monkeys treated with DART-A (Figures 30D-30F).
Circulating T-Lymphocyte Levels, Activation and Subset Analysis
[00249] In contrast to the persistent déplétion of circulating CD 123+ cells, DART-A administered on the 4-day-on/3-day-off schedule (Groups 2-5) were associated with weekly fluctuations in circulating T cells, while administration as continuous 7-day infusions resulted in similarly decreased circulating T cell levels following the first administration that slowly recovered without fluctuation even during the dosing period (Figures 31A-31C). The différence between the two dosing strategies indicates that the effect of DART-A on T lymphocytes is consistent with trafficking and/or margination, rather than déplétion. Following cessation of dosing, T cells rebounded to levels approximately 2-fold higher than baseline for the duration of the recovery period. Infusion of DART-A was associated with an exposure-dependent, progressive increased frequency of T cells expressing the late activation marker, PD1, particularly in CD4+ cells, with dose Group 6 displaying the highest overall levels (Figures 31D-31I and Figures 32A-32F and Figures 33A-33F). Tim-3, a marker
-8820146 associated with T cell exhaustion, was not detected on CD4+ T cells and only at low frequency among CD8+ cells (5.5-9.7%) and comprising 20.5-35.5% of the CD8+/PD-1+ double-positive cells. There was no consistent change in the early T cell activation marker, CD69, and only modest variations in CD25 expression among circulating cells.
[00250] To rule out exhaustion after in vivo exposure, the ex vivo cytotoxic potential of effector cells isolated from cynomolgus monkeys receiving multiple infusions of DART-A was compared to that of cells from naïve monkeys. As shown in Figure 34, PBMC isolated from DART-A-treated monkeys show cytotoxicity comparable to that of cells isolated from naïve monkeys, indicating that in vivo exposure to DART-A does not negatively impact the ability of T cells to kill target cells.
[00251] DART-A exposure increased the relative frequency of central memory CD4 cells and effector memory CD8+ cells at the expense of the corresponding naïve T cell population (Figures 35A-35F and Figures 32A-32F and Figures 33A-33F), indicating that DART-A exposure promoted expansion and/or mobilization of these cells.
Effects on Hematopoiesis and Bone Marrow Precursors
[00252] DART-A was well tolerated in monkeys at ail doses tested; however, réversible réductions in red cell parameters were observed at the highest doses (Figures 36A-36C). Frequent blood sampling could hâve been a potential contributing factor, since vehicle-treated animais showed a modest décliné in red cell mass. Réticulocyte response was observed in ail animais; at the highest exposure (Group 6), however, the response appeared slightly less robust for similar decrease in red cell mass (Figures 36D-36F). Morphological analysis of bone marrow smears throughout the study was unrcmarkable. Flow cytomctry analysis, however, rcvcaled that the frequency of CD 123+ cells within the immature lineage-negative (Lin-) bone marrow populations decreased in DART-A-treated animais at the end of the dosing period, retuming to baseline levels by the end of the recovery time (Figure 37A-37B). HSC (defined as Lin-/CD34+/CD38-/CD45RA-/CD90+ cells (Pang, W.W. et al. (2011) “Human Bone Marrow Hematopoietic Stem Cells Are Increased In Frequency
- 8920146
And Myeloid-Biased With Age,” Proc. Natl. Acad. Sci. (U.S.A.) 108:20012-20017)) showed large inter-group variability; Group 4-6 DART-A-treated monkeys show some apparent réduction compared to the corresponding pre-dose levels, however, no decrease was seen in ail treated groups compared to vehicle-treated animais. These data indicate that HSC are less susceptible to targeting by DART-A and are consistent with the observed reversibility of the négative effects of DART-A treatment on hematopoiesis.
[00253] As demonstrated above, with respect to infusions for 4 weeks on a 4-dayon/3-day-off weekly schedule or a 7-day-on schedule at starting doses of lOOng/kg/day that were escalatcd stepwise weekly to 300, 600, and 1,000ng/kg/day, the administration of DART-A to cynomolgus monkeys was well tolerated. Déplétion of circulating CD123+ cells, including pDCs, was observed after the start of the first administration and persisted throughout the study at ail doses and schedules. Réversible réduction in bone marrow CD 123+ precursor was also observed. Cytokine release, as significant safety concern with CD3-targeted thérapies, appeared manageable and consistent with a first-dose effect. Modcst réversible anémia was noted at the highest doses, but no other (on- or off-target) adverse events were noted.
[00254] The cynomolgus monkey is an appropriate animal model for the pharmacological assessment of DART-A, given the high homology between the orthologs and the ability of DART-A to bind with similar affinity to the antigens and médiate redirected T cell killing in both species. Furthermore, both antigens are concordantly expressed in monkeys and humans, including similar expression by hematopoictic prccursors and in the cytoplasm of the endothélium of multiple tissucs. Minor exceptions are the expression in testicular Leydig cells in humans but not monkeys and low-to-absent CD 123 in monkey monocytes compared to humans.
[00255] A primary concern associated with therapeutic strategies that involve T cell activation includes the release of cytokines and off-target cytotoxic effects. A recent study with a CD3xCD123 bi-specific scFv immunofusion construct with bivalent CD3 récognition demonstrated anti-leukemic activity in vitro, but caused non-specific activation of T cells and IFN-γ sécrétion (Kuo, S.R. et al. (2012) “Engineering A
-9020146
CD123xCD3 Bispecific scFv Immunofusion For The Treatment Of Leukemia And Elimination Of Leukemia Stem Cells,” Protein Eng. Des. Sel. 25:561-569). The monovalent nature of each binding arms and the highly homogeneous monomeric form of DART-A ensure that T cell activation dépends exclusively upon target cell engagement: no T cell activation was observed in the absence of target cells or by using a Control DART molécule that included only the CD3-targeting arm. Furthermore, high doses (up to lOOug/kg/day) of the Control DART molécule did not trigger cytokine release in cynomolgus monkeys.
[00256] The DART-A molécule starting dose of lOOng/kg/day was well tolerated, with minimal cytokine release. Cytokine storm, however, did occur with a high starting dose (5ug/kg/day); however, such dose could be reached safely via stepwise weekly dose escalations, indicating that DART-A-mediated cytokine release appears to bc primarily a first-dosc effect. Déplétion of the CD 123+ target cells, thereby eliminating a source of CD3 ligation, may explain the first-dose effect: nearly complété CD 123+ cell déplétion was observed at doses as low as 3-1 Ong/kg/day, indicating that cytokine release in vivo follows a shifted dose-response compared to cytotoxicity. Dose-response profdes for cytotoxicity and cytokine release by human T cells were also consistent with this observation.
[00257| T cell desensitization, in which DART-A-induced PDI upregulation may play a rôle, appears to also contribute to limit cytokine release after the first infusion of DART-A. Recent studies show that increased PD-1 expression after antigen induced arrest of T cells at inflammation sites contributes, through interactions with PD-L1, to terminating the stop signal, thus rcleasing and desensitizing the cells (Honda, T. et al. (2014) “Tuning Of Antigen Sensitivity By T Cell Receptor-Dependent Négative Feedback Controls T Cell Effector Function In Inflamed Tissues,” Immunity 40:235-247; Wei, F. et al. (2013) “Strength Of PD-1 Signaling Differentially Affects T-Cell Effector Functions,” Proc. Natl. Acad. Sci. (U.S.A.) 110:E2480-E2489). The PD-1 countering of TCR signaling strength is not uniform: while prolifération and cytokine production appear most sensitive to PD-1 inhibition, cytotoxicity is the least affected (Wei, F. et al. (2013) “Strength Of PD-1 Signaling Differentially Affects TCell Effector Functions,” Proc. Natl. Acad. Sci. (U.S.A.) 110:E2480-E2489).
-91 20146
Consistently, the ex vivo cytotoxic potential of T cells from monkeys exposed to multiple infusions of DART-A was comparable to that of T cells from naïve monkeys, despite increased PD-1 levels in the former. Furthermore, PD-1 upregulation was not accompanied by TIM3 expression, a hallmark of T cell exhaustion, as shown for T cells exposed to protracted stimulation with CD3 antibodies or chronic infections (Gebel, H.M. et al. (1989) “T Cells From Patients Successfully Treated With 0KT3 Do Not React With The T-Cell Receptor Antibody.” Hum. Immunol. 26:123-129; Wherry, E.J. (2011) “T Cell Exhaustion,” Nat. Immunol. 12:492-499).
[00258] The déplétion of circulating CD 123+ cells in DART-A-treated monkeys was rapid and persisted during the weekly dosing holidays in the 4-day-on/3-day-off schedule, consistent with target cell élimination. In contrast, the transient fluctuations in circulating T cells were likely the resuit of trafficking from/to tissues and lymphoid organs as a function of DART-A. DART-A exposure promûtes the expansion and/or mobilization of antigen experienced T lymphocytes, cells that preferentially home to tissues and more readily exert cytotoxic effector function (Mirenda, V. et al. (2007) “Physiologie And Aberrant Régulation Of Memory T-Cell Trafficking By The Costimulatory Molécule CD28,” Blood 109:2968-2977; Marelli-Berg, F.M. et al. (2010) “Memory T-Cell Trafficking: New Directions For Busy Commuters,” Immunology 130:158-165).
[00259] Déplétion of CD 123+ normal cells may carry potential liabilities. pDCs and basophils express high levels of CD 123, compared to lower levels in monocytes and eosinophils (Lopez, A.F. et al. (1989) “Reciprocal Inhibition Of Binding Between Interleukin 3 And Granulocyte-Macrophage Colony-Stimulating Factor To Human Eosinophils,” Proc. Natl. Acad. Sci. (U.S.A.) 86:7022-7026; Munoz, L. et al. (2001) “Interleukin-3 Receptor Alpha Chain (CD123) Is Widely Expressed In Hématologie Malignancies,” Haematologica 86:1261-1269; Masten, B.J. et al. (2006) “Characterization Of Myeloid And Plasmacytoid Dendritic Cells In Human Lung,” J. Immunol. 177:7784-7793; Korpelainen, E.I. et al. (1995) “Interferon-Gamma Upregulates Interleukin-3 (IL-3) Receptor Expression In Human Endothélial Cells And Synergizes With IL-3 In Stimulating Major Histocompatibility Complex Class II Expression And Cytokine Production,” Blood 86:176-182). pDCs hâve been shown
-92... : r !i to play a rôle in the control of certain viruses in mouse or monkey models of infection, although they do not appear critical for controlling the immune response to flu (Colonna, M. et al. (1997) “Specificity And Function Of Immunoglobulin Superfamily NK Cell Inhibitory And Stimulatory Receptors, Immunol. Rev. 155:127133; Smit, J.J. et al. (2006) “Plasmacytoid Dendritic Cells Inhibit Pulmonary Immunopathology And Promote Clearance Of Respiratory Syncytial Virus, J. Exp. Med. 203:1153-1159). In tumor models, pDCs may promote tumor growth and metastasis, while pDC déplétion resulted in tumor inhibition (Sawant, A. et al. (2012) “Déplétion Of Plasmacytoid Dendritic Cells Inhibits Tumor Growth And Prevents Bone Metastasis Of Breast Cancer Cells, J. Immunol. 189:4258-4265). Transient, modest, dose-independent facial swelling was observed in some monkeys treated with DART-A; however, no increased histamine levels were observed in these monkeys or when human basophils were lysed via DART-A-mediated T cell killing. Monocyte déplétion may carry increased risks of infection; the conséquence of pDC, basophil or eosinophils déplétion in humans should thus be monitored.
[00260] Committed hematopoietic precursors that express CD123, such as the common myeloid precursor (CMP) (Jordan, C.T. et al. (2000) “The Interleukin-3 Receptor Alpha Chain Is A Unique Marker For Human Acute Myelogenous Leukemia Stem Cells, Leukemia 14:1777-1784; Rieger, M.A. et al. (2012) “Hematopoiesis, Cold Spring Harb. Perspect. Biol. 4:a008250), may be targeted by DART-A, a possible explanation for the modest anémia observed following administration of DART-A at the highest dose. The erythropoietic réticulocyte response appeared to function at ail DART-A dose levels; however, for commensurate drops in red cell parameters, animais subjected to the greatest DART-A exposure (Group 6, 7-day-on infusion) showed a reduced réticulocyte response, suggesting a possible cytotoxic activity on precursors (e.g., CMP). The effect was réversible following cessation of DART-A treatment, consistent with repopulation from spared CD1231ow/negative HSC.
[00261] Altemate approaches for déplétion of CD 123+ cells include a secondgeneration CD123-specific Fc-enhanced monoclonal antibody (Jin, L. et al. (2009) “Monoclonal Antibody-Mediated Targeting Of CD123, IL-3 Receptor Alpha Chain,
- 93 20146
Eliminâtes Human Acute Myeloid Leukemic Stem Cells, Cell Stem Cell 5:31-42; Roberts, A. W. et al. (2010) “A Phase I Study Of Anti-CD123 Monoclonal Antibody (mAb) CSL360 Targeting Leukemia Stem Cells (LSC) In AML, J. Clin. Oncol. 28(Suppl):el3012), IL-3 bound diphtheria toxin (Frankel, A. et al. (2008) “Phase I Clinical Study Of Diphtheria Toxin-Interleukin 3 Fusion Protein In Patients With Acute Myeloid Leukemia And Myelodysplasia, Leuk. Lymphoma 49:543-553), cytokine-induced killer (CIK) cells expressing CD123-specific chimeric antigen receptors (CAR) (Tettamanti, S. et al. (2013) “Targeting Of Acute Myeloid Leukaemia By Cytokine-induced Killer Cells Redirected With A Novel CD123-Specific Chimeric Antigen Receptor, Br. J. Haematol. 161:389-401) and CD123 CAR T cells (Gill, S. et al. (2014) “Efficacy Against Human Acute Myeloid Leukemia And Myeloablation Of Normal Hematopoiesis In A Mouse Model Using Chimeric Antigen ReceptorModified T Cells, Blood 123(15): 2343-2354; Mardiros, A. et al. (2013) “T Cells Expressing CD123-Specific Chimeric Antigen Receptors Exhibit Spécifie Cytolytic Effector Functions And Antitumor Effects Against Human Acute Myeloid Leukemia, Blood 122:3138-3148). CAR T cells exhibited potent leukemic blast cell killing in vitro and anti-leukemic activity in a xenogeneic model of disseminated AML (Mardiros, A. et al. (2013) “T Cells Expressing CD123-Specific Chimeric Antigen Receptors Exhibit Spécifie Cytolytic Effector Functions And Antitumor Effects Against Human Acute Myeloid Leukemia, Blood 122:3138-3148). A recent study reported ablation of normal hematopoiesis in NSG mice engrafted with human CD34+ cells following CD123 CAR T cell transfer (Gill, S. et al. (2014) “Efficacy Against Human Acute Myeloid Leukemia And Myeloablation Of Normal Hematopoiesis In A Mouse Model Using Chimeric Antigen Receptor-Modified T Cells, Blood 123(15): 23432354), although others hâve not observed similar effects in vitro or in vivo (Tettamanti, S. et al. (2013) “Targeting Of Acute Myeloid Leukaemia By Cytokineinduced Killer Cells Redirected With A Novel CD123-Specific Chimeric Antigen Receptor, Br. J. Haematol. 161:389-401; Pizzitola, I. et al. (2014) “Chimeric Antigen Receptors Against CD33/CD123 Antigens Efficiently Target Primary Acute Myeloid Leukemia Cells in vivo, Leukemia doi:10.1038/leu.2014.62). In the above-discussed experiments, déplétion of CD 123+ bone marrow precursor populations was observed, but reversed during recovery; furthermore, déplétion of this minority population
-9420146 resulted in no changes in bone marrow cellularity or erythroid to myeloid cell (E:M) ratio at ail DART-A dose levels tested. These différences underscore the potential advantages of DART-A over cell thérapies, as it provides a titratable System that relies on autologous T cells in contrast to “supercharged” ex vivo transduced cells that may be more diffïcult to control. CD 123 is overexpressed in several hématologie malignancies, including AML, hairy cell leukemia, blastic plasmacytoid dendritic cell neoplasms ( BPDCNs), a subset of B-precursor acute lymphoblastic leukemia (BALL) and chrome lymphocytic leukemia, Hodgkin’s disease Reed-Stemberg cells, as well as in myelodysplastic syndrome and systemic mastocytosis (Kharfan-Dabaja, M.A. et al. (2013) “Diagnostic And Therapeutic Advances In Blastic Plasmacytoid Dendritic Cell Neoplasm: A Focus On Hematopoietic Cell Transplantation,” Biol. Blood Marrow Transplant. 19:1006-1012; Florian, S. et al. (2006) “Détection Of Molecular Targets On The Surface Of CD34+/CD38— Stem Cells In Various Myeloid Malignancies,” Leuk. Lymphoma 47:207-222; Munoz, L. et al. (2001) “Interleukin-3 Receptor Alpha Chain (CD123) Is Widely Expressed In Hématologie Malignancies,” Haematologica 86:1261-1269; Fromm, J.R. (2011) “Flow Cytométrie Analysis Of CD123 Is Useful For Immunophenotyping Classical Hodgkin Lymphoma,” Cytometry B Clin. Cytom. 80:91-99). The predictable pharmacodynamie activity and manageable safety profile observed in non-human primates further supports the clinical utility and efficacy of DART-A as immunotherapy for these disorders.
[00262] In sum, DART-A is an antibody-based molécule engaging the CD3s subunit of the TCR to redirect T lymphocytes against cells expressing CD123, an antigen upregulated in several hematological malignancies. DART-A binds to both human and cynomolgus monkey’s antigens with similar affinities and redirects T cells from both species to kill CD 123+ cells. Monkeys infused 4 or 7 days a week with weekly escalating doses of DART-A showed déplétion of circulating CD 123+ cells 72h after treatment initiation that persisted throughout the 4 weeks of treatment, irrespective of dosing schedules. A decrease in circulating T cells also occurred, but recovered to baseline before the subséquent infusion in monkeys on the 4-day dose schedule, consistent with DART-A-mediated mobilization. DART-A administration increased circulating PD1+, but not TIM-3+, T cells; furthermore, ex vivo analysis of T cells from treated monkeys exhibited unaltered redirected target cell lysis, indicating no
-95 20146 exhaustion. Toxicity was limited to a minimal transient release of cytokines following the DART-A first infusion, but not after subséquent administrations even when the dose was escalated, and a minimal réversible decrease in red cell mass with concomitant réduction in CD123+ bone marrow progenitors. Clinical testing of DART-A in hematological malignancies appears warranted.
[00263] Ail publications and patents mentioned in this spécification are herein incorporated by reference to the same extent as if each individual publication or patent application was specifically and individually indicated to be incorporated by reference in its entirety. While the invention has been described in connection with spécifie embodiments thereof, it will be understood that it is capable of further modifications and this application is intended to cover any variations, uses, or adaptations of the invention following, in general, the principles of the invention and including such dcparturcs from the présent disclosurc as corne within known or customary practice within the art to which the invention pertains and as may be applied to the essential features hereinbefore set forth.
-9620146
Claims (4)
- What Is Claimed Is:Claim 1. A sequence-optimized diabody capable of spécifie binding to an epitope of CDI23 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, wherein: A. the first polypeptide chain comprises, in the N-terminal to C-terminal direction:i. a Domain 1, comprising (1) a sub-Domain (IA), which comprises a VL Domain of a monoclonal antibody capable of binding to CD3 (VLcds) (SEQ ID NO:21); and (2) a sub-Domain (IB), which comprises a VH Domain of a monoclonal antibody capable of binding to CD 123 (VHcdi23) (SEQ ID NO:26), wherein said sub-Domains IA and IB are separated from one another by a peptide linker (SEQ ID NO:29);ii. a Domain 2, wherein said Domain 2 is an E-coil Domain (SEQ ID NO:34) or a K-coil Domain (SEQ ID NO:35), wherein said Domain 2 is separated from said Domain 1 by a peptide linker (SEQ ID NO:30); andB. the second polypeptide chain comprises, in the N-terminal to C-terminal direction:i. a Domain 1, comprising (1) a sub-Domain (IA), which comprises a VL Domain of a monoclonal antibody capable of binding to CD 123 (VLcdi23) (SEQ ID NO:25); and (2) a sub-Domain (IB), which comprises a VH Domain of a monoclonal antibody capable of binding to CD3 (VHcds) (SEQ ID NO:22), wherein said sub-Domains IA and IB are separated from one another by a peptide linker (SEQ ID NO:29);«n ii. a Domain 2, wherein said Domain 2 is a K-coil Domain (SEQ ID NO:35) or an E-coil Domain (SEQ ID NO:34), wherein said Domain 2 is separated from said Domain l by a peptide linker (SEQ ID NO:30); and wherein said Domain 2 of said first and said second polypeptide chains are not both E-coil Domains or both Kcoil Domains:and wherein:(a) said VL Domain of said first polypeptide chain and said VH Domain of said second polypeptide chain form an Antigen Binding Domain capable of specifically binding to an epitope of CD3; and (b) said VL Domain of said second polypeptide chain and said VH Domain of said first polypeptide chain form an Antigen Binding Domain capable of specifically binding to an epitope of CD123.Claim
- 2. The diabody of claim l, wherein said first polypeptide chain additionally comprises an Albumin-Binding Domain (SEQ ID NO:36) linked to said Domain 2 via a peptide linker (SEQ ID NO:31).Claim
- 3. The diabody of claim l, wherein said second polypeptide chain additionally comprises a Domain 3 comprising a CH2 and CH3 Domain of an immunoglobulin Fc Domain (SEQ ID NO:37), wherein said Domain 3 is linked to said Domain l via a peptide linker (SEQ ID NO:33).Claim
- 4. The diabody of claim l, wherein said first polypeptide chain additionally comprises a Domain 3 comprising a CH2 and CH3 Domain of an immunoglobulin Fc Domain (SEQ ID NO:37), wherein said Domain 3 is linked to said Domain l via a peptide linker (SEQ ID NO:33).Claim5. The diabody of claim 1, wherein said second polypeptide chain additionally comprises a Domain 3 comprising a CH2 and CH3 Domain of an immunoglobulin Fc Domain (SEQ ID NO:37), wherein said Domain 3 is linked to said Domain 2 via a peptide linker (SEQ ID NO:32).WClaim 6. The diabody of claim 1, wherein said first polypeptide chain additionally comprises a Domain 3 comprising a CH2 and CH3 Domain of an immunoglobulin Fc Domain (SEQ ID NO:37), wherein said Domain 3 is linked to said Domain 2 via a peptide linker (SEQ ID NO:32).Claim 7. The diabody of claim 3 or claim 4, wherein said diabody further comprises a third polypeptide chain comprising a CH2 and CH3 Domain of an immunoglobulin Fc Domain (SEQ ID NO: 11).Claim 8. The diabody of claim 5 or claim 6, wherein said diabody further comprises a third polypeptide chain comprising a CH2 and CH3 Domain of an immunoglobulin Fc Domain (SEQ ID NO: 11).Claim 9. The diabody of any of claims 1 to 6, wherein said Domain 2 of said first polypeptide chain is a K-coil Domain (SEQ ID NO:35) and said Domain 2 of said second polypeptide chain is an E-coil Domain (SEQ ID NO:34).Claim 10. The diabody of any of claims 1 to 6, wherein said Domain 2 of said first polypeptide chain is an E-coil Domain (SEQ ID NO:34) and said Domain 2 of said second polypeptide chain is a K-coil Domain (SEQ ID NO:35).Claim 11. The diabody of any preceding claim, wherein the diabody is capable of crossreacting with both human and primate CD 123 and CD3 proteins.Claim 12. A bi-specific diabody capable of spécifie binding to an epitope of CD 123 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, wherein: said bispecific diabody comprises:A. a first polypeptide chain having the amino acid sequence of SEQ ID NO:1; andB. a second polypeptide chain having the amino acid sequence of SEQ ID NO:3;wherein said first and said second polypeptide chains are covalently bonded to one another by a disulfide bond.qqClaim 13. A bi-specific diabody capable of spécifie binding to an epitope of CD123 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, and further comprises a third polypeptide chain, wherein: said bi-specific diabody comprises:A. a first polypeptide chain having the amino acid sequence of SEQ ID NO:13;B. a second polypeptide chain having the amino acid sequence of SEQ ID NO:15; andC. a third polypeptide chain having the amino acid sequence of SEQ ID NO:54, wherein said first and said second polypeptide chains are covalently bonded to one another by a disulfide bond.Claim 14. A bi-specific diabody capable of spécifie binding to an epitope of CD123 and to an epitope of CD3, wherein the diabody comprises a first polypeptide chain and a second polypeptide chain, covalently bonded to one another, and further comprises a third polypeptide chain, wherein: said bi-specific diabody comprises:A. a first polypeptide chain having the amino acid sequence of SEQ ID NO:17;B. a second polypeptide chain having the amino acid sequence of SEQ ID NO:1; andC. a third polypeptide chain having the amino acid sequence of SEQ ID NO:54, wherein said first and said second polypeptide chains are covalently bonded to one another by a disulfide bond.Claim 15. The diabody of any preceding claim for use as a pharmaceutical.Claim 16. The diabody of any of claims 1 to 14 for use in the treatment of a disease or condition associated with or characterized by the expression of CD 123.Claim 17. The diabody of claim 16, wherein said disease or condition associated with or characterized by the expression of CD 123 is cancer.Claim 18. The diabody of claim 17, wherein said cancer is selected from the group consisting of: acute myeloid leukemia (AML), chronic myelogenous leukemia (CML), including blastic crisis of CML and Abelson oncogene associated with CML (BcrABL translocation), myelodysplastic syndrome (MDS), acute B lymphoblastic leukemia (B-ALL), chronic lymphocytic leukemia (CLL), including Richter’s syndrome or Richter’s transformation of CLL, hairy cell leukemia (HCL), blastic plasmacytoid dendritic cell neoplasm (BPDCN), non-Hodgkin lymphomas (NHL), including mantel cell leukemia (MCL), and small lymphocytic lymphoma (SLL), Hodgkin’s lymphoma, systemic mastocytosis, and Burkitt’s lymphoma.Claim 19. The diabody of claim 16, wherein said disease or condition associated with or characterized by the expression of CD123 is an inflammatory condition.Claim 20. The diabody of claim 19, wherein said inflammatory condition is selected from the group consisting of: Autoimmune Lupus (SLE), allergy and asthma, rheumatoid arthritis.Claim 21. A pharmaceutical composition comprising the diabody of any of daims l to 14 and a physiologically acceptable carrier.Claim 22. Use of the pharmaceutical composition of claim 21 in the treatment of a disease or condition associated with or characterized by the expression of CDI23.Claim 23. The use of claim 22, wherein said disease or condition associated with or characterized by the expression of CDI23 is cancer.Claim 24. The use of claim 23, wherein said cancer is selected from the group consisting of: acute myeloid leukemia (AML), chronic myelogenous leukemia (CML), including blastic crisis of CML and Abelson oncogene associated with CML (Bcr-ABL translocation), myelodysplastic syndrome (MDS), acute B lymphoblastic leukemia (B-ALL), chronic lymphocytic leukemia (CLL), including Richter’s syndrome or Richter’s transformation of CLL, hairy cell leukemia (HCL), blastic plasmacytoid dendritic cell neoplasm (BPDCN), non-Hodgkin lymphomas (NHL), including ici mantel cell leukemia (MCL), and small lymphocytic lymphoma (SLL), Hodgkin’s lymphoma, systemic mastocytosis, and Burkitt’s lymphoma.Claim 25. The use of claim 22, wherein said disease or condition associated with or characterized by the expression of CD 123 is an inflammatory condition.Claim 26. The use of claim 25, wherein said inflammatory condition is selected from the group consisting of: Autoimmune Lupus (SLE), allergy and asthma.Abstract of the Disclosure:The présent invention is directed to sequence-optimized CD123 x CD3 bi-specific monovalent diabodies that are capable of simultaneous binding to CD 123 and CD3, and to the uses of such diabodies in the treatment of hématologie malignancies.
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US61/869,528 | 2013-08-23 | ||
| US61/907,691 | 2013-11-22 | ||
| EP13198859 | 2013-12-20 | ||
| US61/990,475 | 2014-05-08 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| OA20146A true OA20146A (en) | 2021-12-30 |
Family
ID=
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| US10787521B2 (en) | Bi-specific monovalent diabodies that are capable of binding CD123 and CD3, and uses thereof | |
| US20250313628A1 (en) | Bi-specific monovalent diabodies that are capable of binding cd19 and cd3, and uses thereof | |
| US12448423B2 (en) | Targeted heterodimeric Fc fusion proteins containing NKG2D antigen binding domains | |
| JP7803907B2 (en) | Mesothelin and CD137 binding molecules | |
| JP7489316B2 (en) | FC-binding fragment having PD-LI antigen-binding site | |
| JP7603205B2 (en) | Antibody molecule | |
| CN105051066B (en) | Bispecific IgG antibodies as T-cell adapters | |
| JP2021524278A (en) | Anti-mesotelin antibody | |
| TW202413419A (en) | Natural killer (nk) cell engagers binding to nkp46 and bcma variants with fc-engineering | |
| HK40051640A (en) | Bi-specific monovalent diabodies that are capable of binding cd123 and cd3, and uses thereof | |
| OA20146A (en) | Bi-specific monovalent diabodies that are capable of binding to GPA33 and CD3, and uses thereof. | |
| ES2860973T3 (en) | Bispecific monovalent diabodies that can bind CD123 and CD3 and uses of these | |
| HK1225999B (en) | Bi-specific monovalent diabodies that are capable of binding cd123 and cd3, and uses thereof | |
| NZ716914B2 (en) | Bi-specific monovalent diabodies that are capable of binding cd123 and cd3, and uses therof | |
| HK1228247B (en) | Bi-specific monovalent diabodies that are capable of binding cd123 and cd3, and uses therof | |
| HK1228247A1 (en) | Bi-specific monovalent diabodies that are capable of binding cd123 and cd3, and uses therof |