OA19265A - Substituted indoline derivatives as dengue viral replication inhibitors - Google Patents
Substituted indoline derivatives as dengue viral replication inhibitors Download PDFInfo
- Publication number
- OA19265A OA19265A OA1201800369 OA19265A OA 19265 A OA19265 A OA 19265A OA 1201800369 OA1201800369 OA 1201800369 OA 19265 A OA19265 A OA 19265A
- Authority
- OA
- OAPI
- Prior art keywords
- compound
- pharmaceutically acceptable
- mmol
- solvaté
- polymorph
- Prior art date
Links
- 206010012310 Dengue fever Diseases 0.000 title claims abstract description 20
- 208000001490 Dengue Diseases 0.000 title claims abstract description 19
- 230000002401 inhibitory effect Effects 0.000 title claims description 10
- 125000003387 indolinyl group Chemical class N1(CCC2=CC=CC=C12)* 0.000 title abstract 2
- 239000003112 inhibitor Substances 0.000 title 1
- 230000029812 viral genome replication Effects 0.000 title 1
- 150000001875 compounds Chemical class 0.000 claims abstract description 199
- 239000008194 pharmaceutical composition Substances 0.000 claims abstract description 16
- 239000003814 drug Substances 0.000 claims abstract description 12
- IAZDPXIOMUYVGZ-WFGJKAKNSA-N DMSO-d6 Chemical compound [2H]C([2H])([2H])S(=O)C([2H])([2H])[2H] IAZDPXIOMUYVGZ-WFGJKAKNSA-N 0.000 claims description 36
- 238000004895 liquid chromatography mass spectrometry Methods 0.000 claims description 27
- 238000005160 1H NMR spectroscopy Methods 0.000 claims description 26
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 claims description 22
- 241000725619 Dengue virus Species 0.000 claims description 18
- -1 di-substituted indole group Chemical group 0.000 claims description 7
- 238000004519 manufacturing process Methods 0.000 claims description 6
- 229960005486 vaccines Drugs 0.000 claims description 6
- 239000000969 carrier Substances 0.000 claims description 5
- 239000003443 antiviral agent Substances 0.000 claims description 4
- 239000003085 diluting agent Substances 0.000 claims description 4
- 239000000546 pharmaceutic aid Substances 0.000 claims description 4
- 239000012472 biological sample Substances 0.000 claims 2
- 239000000203 mixture Substances 0.000 abstract description 99
- 206010047461 Viral infection Diseases 0.000 abstract description 9
- 208000001756 Virus Disease Diseases 0.000 abstract description 9
- 230000017613 viral reproduction Effects 0.000 abstract description 9
- 238000000034 method Methods 0.000 abstract description 3
- 238000002360 preparation method Methods 0.000 abstract 3
- 230000002265 prevention Effects 0.000 abstract 1
- XEKOWRVHYACXOJ-UHFFFAOYSA-N acetic acid ethyl ester Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 135
- WYURNTSHIVDZCO-UHFFFAOYSA-N tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 68
- 235000019439 ethyl acetate Nutrition 0.000 description 67
- VEXZGXHMUGYJMC-UHFFFAOYSA-N HCl Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 62
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 description 60
- 229910000041 hydrogen chloride Inorganic materials 0.000 description 60
- 239000000243 solution Substances 0.000 description 57
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 50
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 45
- CSNNHWWHGAXBCP-UHFFFAOYSA-L magnesium sulphate Substances [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 45
- 239000002904 solvent Substances 0.000 description 45
- 230000015572 biosynthetic process Effects 0.000 description 40
- ZAFNJMIOTHYJRJ-UHFFFAOYSA-N diisopropyl ether Chemical compound CC(C)OC(C)C ZAFNJMIOTHYJRJ-UHFFFAOYSA-N 0.000 description 40
- 239000000543 intermediate Substances 0.000 description 40
- 238000003786 synthesis reaction Methods 0.000 description 40
- 230000002194 synthesizing Effects 0.000 description 40
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 36
- KFZMGEQAYNKOFK-UHFFFAOYSA-N iso-propanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 32
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 30
- IMNFDUFMRHMDMM-UHFFFAOYSA-N n-heptane Chemical compound CCCCCCC IMNFDUFMRHMDMM-UHFFFAOYSA-N 0.000 description 29
- 210000004027 cells Anatomy 0.000 description 27
- OKKJLVBELUTLKV-UHFFFAOYSA-N methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 25
- 239000000741 silica gel Substances 0.000 description 25
- 229910002027 silica gel Inorganic materials 0.000 description 25
- 235000019341 magnesium sulphate Nutrition 0.000 description 23
- 239000012071 phase Substances 0.000 description 23
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 22
- 230000005526 G1 to G0 transition Effects 0.000 description 21
- 239000012044 organic layer Substances 0.000 description 21
- HBFXVTVOSLPOEY-UHFFFAOYSA-N ethoxyethane;2-propan-2-yloxypropane Chemical compound CCOCC.CC(C)OC(C)C HBFXVTVOSLPOEY-UHFFFAOYSA-N 0.000 description 20
- 238000003818 flash chromatography Methods 0.000 description 20
- BWHMMNNQKKPAPP-UHFFFAOYSA-L potassium carbonate Chemical compound [K+].[K+].[O-]C([O-])=O BWHMMNNQKKPAPP-UHFFFAOYSA-L 0.000 description 20
- 238000006243 chemical reaction Methods 0.000 description 18
- 239000003208 petroleum Substances 0.000 description 18
- 241000700605 Viruses Species 0.000 description 17
- HEMHJVSKTPXQMS-UHFFFAOYSA-M sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 17
- 229910052739 hydrogen Inorganic materials 0.000 description 16
- 239000012074 organic phase Substances 0.000 description 16
- 239000001257 hydrogen Substances 0.000 description 15
- 239000000047 product Substances 0.000 description 15
- 239000002244 precipitate Substances 0.000 description 14
- BDAGIHXWWSANSR-UHFFFAOYSA-N formic acid Chemical compound OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 13
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 description 13
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 12
- 239000011541 reaction mixture Substances 0.000 description 12
- PNPLYTNOEFFKNA-UHFFFAOYSA-N COc1cc(N)cc(OCCCC(=O)OC(C)(C)C)c1 Chemical compound COc1cc(N)cc(OCCCC(=O)OC(C)(C)C)c1 PNPLYTNOEFFKNA-UHFFFAOYSA-N 0.000 description 11
- YNESATAKKCNGOF-UHFFFAOYSA-N Lithium bis(trimethylsilyl)amide Chemical compound [Li+].C[Si](C)(C)[N-][Si](C)(C)C YNESATAKKCNGOF-UHFFFAOYSA-N 0.000 description 11
- 239000012267 brine Substances 0.000 description 11
- 238000002844 melting Methods 0.000 description 11
- 238000003756 stirring Methods 0.000 description 11
- 239000007864 aqueous solution Substances 0.000 description 10
- 125000001309 chloro group Chemical group Cl* 0.000 description 10
- 229910000027 potassium carbonate Inorganic materials 0.000 description 10
- 239000012047 saturated solution Substances 0.000 description 10
- ZMANZCXQSJIPKH-UHFFFAOYSA-N triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 10
- QTBSBXVTEAMEQO-UHFFFAOYSA-N acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 9
- 230000000840 anti-viral Effects 0.000 description 8
- 125000004435 hydrogen atoms Chemical group [H]* 0.000 description 8
- 230000003287 optical Effects 0.000 description 8
- 235000015320 potassium carbonate Nutrition 0.000 description 8
- YXFVVABEGXRONW-UHFFFAOYSA-N toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 8
- 239000003643 water by type Substances 0.000 description 8
- 101700033661 ACTB Proteins 0.000 description 7
- 102100011550 ACTB Human genes 0.000 description 7
- 101710032514 ACTI Proteins 0.000 description 7
- GRURNZDSWAIYNK-UHFFFAOYSA-N FC1=CC=C(C=C1)C(C(N1CCC2=CC=C(C=C12)C(F)(F)F)=O)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC Chemical compound FC1=CC=C(C=C1)C(C(N1CCC2=CC=C(C=C12)C(F)(F)F)=O)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC GRURNZDSWAIYNK-UHFFFAOYSA-N 0.000 description 7
- IJOOHPMOJXWVHK-UHFFFAOYSA-N Trimethylsilyl chloride Chemical compound C[Si](C)(C)Cl IJOOHPMOJXWVHK-UHFFFAOYSA-N 0.000 description 7
- 239000002253 acid Substances 0.000 description 7
- 238000002425 crystallisation Methods 0.000 description 7
- 230000005712 crystallization Effects 0.000 description 7
- 239000002552 dosage form Substances 0.000 description 7
- 239000001963 growth media Substances 0.000 description 7
- 239000002609 media Substances 0.000 description 7
- 150000003839 salts Chemical class 0.000 description 7
- 239000011780 sodium chloride Substances 0.000 description 7
- 238000004808 supercritical fluid chromatography Methods 0.000 description 7
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 description 7
- JNWBBCNCSMBKNE-UHFFFAOYSA-N HATU Chemical compound F[P-](F)(F)(F)(F)F.C1=CN=C2N(OC(N(C)C)=[N+](C)C)N=NC2=C1 JNWBBCNCSMBKNE-UHFFFAOYSA-N 0.000 description 6
- PCLIMKBDDGJMGD-UHFFFAOYSA-N N-Bromosuccinimide Chemical compound BrN1C(=O)CCC1=O PCLIMKBDDGJMGD-UHFFFAOYSA-N 0.000 description 6
- 238000004587 chromatography analysis Methods 0.000 description 6
- RTZKZFJDLAIYFH-UHFFFAOYSA-N diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 6
- 201000009910 diseases by infectious agent Diseases 0.000 description 6
- 150000002431 hydrogen Chemical group 0.000 description 6
- SIKJAQJRHWYJAI-UHFFFAOYSA-N indole Chemical compound C1=CC=C2NC=CC2=C1 SIKJAQJRHWYJAI-UHFFFAOYSA-N 0.000 description 6
- 238000003753 real-time PCR Methods 0.000 description 6
- IDZHGNMTEPOUAZ-UHFFFAOYSA-N ClC1=CC(=C(C=C1)C(C(=O)N1CCC2=CC(=C(C=C12)C(F)(F)F)OC)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC)F Chemical compound ClC1=CC(=C(C=C1)C(C(=O)N1CCC2=CC(=C(C=C12)C(F)(F)F)OC)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC)F IDZHGNMTEPOUAZ-UHFFFAOYSA-N 0.000 description 5
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- JXHWTBYDKCXMBE-UHFFFAOYSA-N ClC1=CC(=C(C=C1)C(C(N1CCC2=CC=C(C=C12)OC(F)(F)F)=O)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC)OC Chemical compound ClC1=CC(=C(C=C1)C(C(N1CCC2=CC=C(C=C12)OC(F)(F)F)=O)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC)OC JXHWTBYDKCXMBE-UHFFFAOYSA-N 0.000 description 5
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- 125000001153 fluoro group Chemical group F* 0.000 description 5
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- 125000000876 trifluoromethoxy group Chemical group FC(F)(F)O* 0.000 description 5
- CDPKJZJVTHSESZ-UHFFFAOYSA-N 4-chlorophenylacetic acid Chemical compound OC(=O)CC1=CC=C(Cl)C=C1 CDPKJZJVTHSESZ-UHFFFAOYSA-N 0.000 description 4
- QLRKBYZLPCDISY-UHFFFAOYSA-N ClC1=CC(=C(C=C1)C(C(N1CCC2=CC=C(C=C12)C(F)(F)F)=O)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC)OC Chemical compound ClC1=CC(=C(C=C1)C(C(N1CCC2=CC=C(C=C12)C(F)(F)F)=O)NC=1C=C(OCCCC(=O)O)C=C(C=1)OC)OC QLRKBYZLPCDISY-UHFFFAOYSA-N 0.000 description 4
- 229920002676 Complementary DNA Polymers 0.000 description 4
- 241000255925 Diptera Species 0.000 description 4
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- IAZDPXIOMUYVGZ-UHFFFAOYSA-N dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 4
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- 150000002500 ions Chemical class 0.000 description 4
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- 229920000401 Three prime untranslated region Polymers 0.000 description 3
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- 239000002775 capsule Substances 0.000 description 3
- 125000004432 carbon atoms Chemical group C* 0.000 description 3
- 238000001816 cooling Methods 0.000 description 3
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- 230000014509 gene expression Effects 0.000 description 3
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- WMFOQBRAJBCJND-UHFFFAOYSA-M lithium hydroxide Chemical compound [Li+].[OH-] WMFOQBRAJBCJND-UHFFFAOYSA-M 0.000 description 3
- 230000003389 potentiating Effects 0.000 description 3
- 239000000843 powder Substances 0.000 description 3
- JUJWROOIHBZHMG-UHFFFAOYSA-N pyridine Substances C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 3
- 238000004366 reverse phase liquid chromatography Methods 0.000 description 3
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- YOQDYZUWIQVZSF-UHFFFAOYSA-N sodium borohydride Chemical compound [BH4-].[Na+] YOQDYZUWIQVZSF-UHFFFAOYSA-N 0.000 description 3
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- 230000003833 cell viability Effects 0.000 description 1
- 239000003795 chemical substances by application Substances 0.000 description 1
- 230000000052 comparative effect Effects 0.000 description 1
- 229910052802 copper Inorganic materials 0.000 description 1
- 239000010949 copper Substances 0.000 description 1
- RYGMFSIKBFXOCR-UHFFFAOYSA-N copper Chemical compound [Cu] RYGMFSIKBFXOCR-UHFFFAOYSA-N 0.000 description 1
- 230000000875 corresponding Effects 0.000 description 1
- 125000004093 cyano group Chemical group *C#N 0.000 description 1
- 201000002949 dengue disease Diseases 0.000 description 1
- 201000009892 dengue shock syndrome Diseases 0.000 description 1
- 229910052805 deuterium Inorganic materials 0.000 description 1
- YZCKVEUIGOORGS-OUBTZVSYSA-N deuterium Chemical compound [2H] YZCKVEUIGOORGS-OUBTZVSYSA-N 0.000 description 1
- WGLUMOCWFMKWIL-UHFFFAOYSA-N dichloromethane;methanol Chemical compound OC.ClCCl WGLUMOCWFMKWIL-UHFFFAOYSA-N 0.000 description 1
- 108010037444 diisopropylglutathione ester Proteins 0.000 description 1
- UXGNZZKBCMGWAZ-UHFFFAOYSA-N dimethylformamide DMF Chemical compound CN(C)C=O.CN(C)C=O UXGNZZKBCMGWAZ-UHFFFAOYSA-N 0.000 description 1
- 238000001035 drying Methods 0.000 description 1
- 239000000975 dye Substances 0.000 description 1
- 239000003480 eluent Substances 0.000 description 1
- 108091005938 enhanced green fluorescent protein Proteins 0.000 description 1
- 229940093499 ethyl acetate Drugs 0.000 description 1
- 239000000284 extract Substances 0.000 description 1
- 239000012065 filter cake Substances 0.000 description 1
- 238000009472 formulation Methods 0.000 description 1
- 238000004108 freeze drying Methods 0.000 description 1
- 239000011521 glass Substances 0.000 description 1
- 150000002334 glycols Chemical class 0.000 description 1
- UFHFLCQGNIYNRP-UHFFFAOYSA-N hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 1
- 239000005457 ice water Substances 0.000 description 1
- 150000002476 indolines Chemical class 0.000 description 1
- 230000002757 inflammatory Effects 0.000 description 1
- XMBWDFGMSWQBCA-UHFFFAOYSA-M iodide Chemical compound [I-] XMBWDFGMSWQBCA-UHFFFAOYSA-M 0.000 description 1
- 230000000155 isotopic Effects 0.000 description 1
- 231100000053 low toxicity Toxicity 0.000 description 1
- 239000000314 lubricant Substances 0.000 description 1
- 230000002934 lysing Effects 0.000 description 1
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 1
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- 230000017074 necrotic cell death Effects 0.000 description 1
- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 238000004305 normal phase HPLC Methods 0.000 description 1
- 239000003921 oil Substances 0.000 description 1
- 239000006186 oral dosage form Substances 0.000 description 1
- 239000003960 organic solvent Substances 0.000 description 1
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- 238000000746 purification Methods 0.000 description 1
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- 239000003161 ribonuclease inhibitor Substances 0.000 description 1
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- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 1
- 235000017557 sodium bicarbonate Nutrition 0.000 description 1
- 229910000029 sodium carbonate Inorganic materials 0.000 description 1
- 235000010288 sodium nitrite Nutrition 0.000 description 1
- ODGROJYWQXFQOZ-UHFFFAOYSA-N sodium;boron(1-) Chemical compound [B-].[Na+] ODGROJYWQXFQOZ-UHFFFAOYSA-N 0.000 description 1
- MHSYOMOOZBKVFH-UHFFFAOYSA-M sodium;hydrogen carbonate;sodium Chemical compound [Na].[Na+].OC([O-])=O MHSYOMOOZBKVFH-UHFFFAOYSA-M 0.000 description 1
- WGRULTCAYDOGQK-UHFFFAOYSA-M sodium;sodium;hydroxide Chemical compound [OH-].[Na].[Na+] WGRULTCAYDOGQK-UHFFFAOYSA-M 0.000 description 1
- 239000008247 solid mixture Substances 0.000 description 1
- 238000001694 spray drying Methods 0.000 description 1
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- 229960001367 tartaric acid Drugs 0.000 description 1
- 235000002906 tartaric acid Nutrition 0.000 description 1
- 239000011975 tartaric acid Substances 0.000 description 1
- JJXOIFHXNBFRNV-UHFFFAOYSA-N tert-butyl (2-methylpropan-2-yl)oxycarbonyl carbonate Chemical compound CC(C)(C)OC(=O)OC(=O)OC(C)(C)C.CC(C)(C)OC(=O)OC(=O)OC(C)(C)C JJXOIFHXNBFRNV-UHFFFAOYSA-N 0.000 description 1
- HJEZRYIJNHAIGY-UHFFFAOYSA-N tert-butyl 4-bromobutanoate Chemical compound CC(C)(C)OC(=O)CCCBr HJEZRYIJNHAIGY-UHFFFAOYSA-N 0.000 description 1
- WHRNULOCNSKMGB-UHFFFAOYSA-N tetrahydrofuran THF Chemical compound C1CCOC1.C1CCOC1 WHRNULOCNSKMGB-UHFFFAOYSA-N 0.000 description 1
- PHCBRBWANGJMHS-UHFFFAOYSA-J tetrasodium;disulfate Chemical compound [Na+].[Na+].[Na+].[Na+].[O-]S([O-])(=O)=O.[O-]S([O-])(=O)=O PHCBRBWANGJMHS-UHFFFAOYSA-J 0.000 description 1
- 230000002588 toxic Effects 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000035897 transcription Effects 0.000 description 1
- DTQVDTLACAAQTR-UHFFFAOYSA-N trifluoroacetic acid Substances OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 1
- 229910000404 tripotassium phosphate Inorganic materials 0.000 description 1
- 235000019798 tripotassium phosphate Nutrition 0.000 description 1
- 229910052722 tritium Inorganic materials 0.000 description 1
- YZCKVEUIGOORGS-NJFSPNSNSA-N tritium Chemical compound [3H] YZCKVEUIGOORGS-NJFSPNSNSA-N 0.000 description 1
- 235000012431 wafers Nutrition 0.000 description 1
Abstract
The present invention concerns substituted indoline derivatives, methods to prevent or treat dengue viral infections by using said compounds and also relates to said compounds for use as a medicine, more preferably for use as a medicine to treat or prevent dengue viral infections. The present invention furthermore relates to pharmaceutical compositions or combination preparations of the compounds, to the compositions or preparations for use as a medicine, more preferably for the prevention or treatment of dengue viral infections. The invention also relates to processes for preparation of the compounds.
Description
Following infection with another serotype, pre-existing heterologous antibodies form complexes with the newly infecting dengue virus serotype but do not neutralize the pathogen. Instead, virus entry into cells is believed to be facilitated, resulting in uncontrolled virus réplication and higher peak viral titers. In both primary and secondary infections, higher viral titers are associated with more severe dengue disease. Since maternai antibodies can easily pass on to infants by breast feeding, this might be one of the reasons that children are more affected by severe dengue disease than adults.
In locations with two or more serotypes circulating simultaneously, also referred to as hyper endemic régions, the risk of serious dengue disease is significantly higher due to an increased risk of experiencing a secondary, more severe infection. Moreover, in a situation of hyper-endemicity, the probability of the emergence of more virulent strains is increased, which in turn augmente the probability of dengue hémorrhagie fever (DHF) or dengue shock syndrome.
The mosquitoes that carry dengue, including Aedes aegypti and Aedes albopictus (tiger mosquito), are moving north on the globe. According to the United States (US) Centers for Disease Control and Prévention (CDC), both mosquitoes are currently omniprésent in Southern Texas. The spread north of dengue-carrying mosquitoes is not confined to the US, but has also been observed in Europe.
Dengvaxia®, the dengue vaccine produced by Sanofi Pasteur was first approved in Mexico and has received in the meantime approval in more countries. Nevertheless, the vaccine leaves considérable room for improvement due to limited efficacy, especially against DENV-1 and -2, low efficacy in flavivirus-naïve subjects and the lengthy dosing schedule.
Despite these shortcomings, the vaccine is a game changer in endemic settings as it will offer protection to a large part of the population, but likely not to very young infants, who bear the largest burden of dengue. In addition, the dosing schedule and very limited efficacy in flavivirus-naïve subjects make it unsuitable and likely not worthwhile/cost-effective for travelers from non-endemic areas to dengue-endemic areas. The above mentioned shortcomings of the dengue vaccines are the reason why there is a need for a pre-exposure prophylactic dengue antiviral.
Furthermore, today, spécifie antiviral drugs for the treatment or prévention of dengue fever virus infection are not available. Clearly, there is still a great unmet medical need for therapeutics for the prévention or treatment of viral infections in
-3animals, more in particular in humans and especially for viral infections caused by Flaviviruses, more in particular Dengue virus. Compounds with good anti-viral potency, no or low levels of side-effects, a broad spectrum activity against multiple Dengue virus serotypes, a low toxicity and/or good pharmacokinetic or -dynamic properties are highly needed.
WO-2010/021878 discloses 2-phenylpyrrolidine and indoline dérivatives as cold menthol receptor antagonists for treatment of inflammatory and central diseases. WO-2013/045516 discloses indole and indoline dérivatives for use in the treatment of dengue viral infections.
The présent invention now provides compounds, substituted indoline dérivatives, which show high potent activity against ail four (4) serotypes of the Dengue virus.
SUMMARY OF THE INVENTION
The présent invention is based on the unexpected finding that at least one of the above-mentioned problems can be solved by the current compounds of the invention.
The présent invention provides compounds which hâve been shown to possess potent antiviral activity against ail four (4) serotypes currently known. The présent invention furthermore demonstrates that these compounds efficiently inhibit prolifération of Dengue virus (DENV). Therefore, these compounds constitute a useful class of potent compounds that can be used in the treatment and/or prévention of viral infections in animais, mammals and humans, more specifically for the treatment and/or prévention of infections with Dengue viruses.
The présent invention furthermore relates to the use of such compounds as medicines and to their use for the manufacture of médicaments for treating and/or preventing viral infections, in particular with viruses belonging to the family of the Dengue viruses in animais or mammals, more in particular in humans. The invention also relates to methods for the préparation of ail such compounds and to pharmaceutical compositions comprising them in an effective amount.
The présent invention also relates to a method of treatment or prévention of dengue viral infections in humans by the administration of an effective amount of one or more such compounds, or a pharmaceutically acceptable sait thereof optionally in combination with one or more other medicines, like another antiviral agent, to a patient in need thereof.
One aspect of the invention is the provision of compounds having formula (I), a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof:
wherein the compounds are selected from the group comprising:
In an alternative embodiment, the présent invention relates to a compound having formula (I)
a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof, wherein
Ri is fluoro, R2 is hydrogen, R3 is trifluoromethyl, and R4 is hydrogen; or R-l is fluoro, R2 is hydrogen, R3 is trifluoromethoxy, and R4 is hydrogen; or
R-i is chloro, R2 is hydrogen, R3 is trifluoromethyl, and R4 is hydrogen; or
R1 is chloro, R2 is hydrogen, R3 is trifluoromethoxy, and R4 is hydrogen; or
R1 is chloro, R2 is hydrogen, R3 is trifluoromethyl, and R4 is methoxy; or
-6R-ι is chloro, R2 is methoxy, R3 is trifluoromethyl, and R4 is hydrogen; or
Ri is chloro, R2 is methoxy, R3 is trifluoromethyl, and R4 is methoxy; or
Ri is chloro, R2 is methoxy, R3 is trifluoromethoxy, and R4 is hydrogen; or
Ri is chloro, R2 is fluoro, R3 is trifluoromethyl, and R4 is hydrogen; or
R-i is chloro, R2 is fluoro, R3 is trifluoromethoxy, and R4 is hydrogen; or
R-i is chloro, R2 is fluoro, R3 is trifluoromethyl, and R4 is methoxy; or
R-l is chloro, R2 is hydrogen, R3 is trifluoromethoxy, and R4 is methoxy.
Part of the current invention is also a pharmaceutical composition comprising a compound mentioned above or a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof together with one or more pharmaceutically acceptable excipients, diluents or carriers.
Pharmaceutically acceptable salts of said compounds include the acid addition and base salts thereof. Suitable acid addition salts are formed from acids which form non-toxic salts. Suitable base salts are formed from bases which form nontoxic salts.
The compounds of the invention may also exist in un-solvated and solvated forms. The term “solvaté” is used herein to describe a molecular complex comprising the compound of the invention and one or more pharmaceutically acceptable solvent molécules, for example, éthanol.
The term “polymorph” refers to the ability of the compound of the invention to exist in more than one form or crystal structure.
The compounds of the présent invention may be administered as crystalline or amorphous products. They may be obtained for example as solid plugs, powders, or films by methods such as précipitation, crystallization, freeze drying, spray drying, or evaporative drying. They may be administered alone or in combination with one or more other compounds of the invention or in combination with one or more other drugs. Generally, they will be administered as a formulation in association with one or more pharmaceutically acceptable excipients. The term “excipient” is used herein to describe any ingrédient other than the compound(s) of the invention. The choice of excipient dépends largely on factors such as the particular mode of administration, the effect of the excipient on solubility and stability, and the nature of the dosage form.
The compounds of the présent invention or any subgroup thereof may be formulated into various pharmaceutical forms for administration purposes. As
-7appropriate compositions there may be cited ail compositions usually employed for systemically administering drugs. To préparé the pharmaceutical compositions of this invention, an effective amount of the particular compound, optionally in addition sait form, as the active ingrédient is combined in intimate admixture with a pharmaceutically acceptable carrier, which carrier may take a wide variety of forms depending on the form of préparation desired for administration. These pharmaceutical compositions are desirably in unitary dosage form suitable, for example, for oral or rectal administration. For example, in preparing the compositions in oral dosage form, any of the usual pharmaceutical media may be employed such as, for example, water, glycols, oils, alcohols and the like in the case of oral liquid préparations such as suspensions, syrups, élixirs, émulsions, and solutions; or solid carriers such as starches, sugars, kaolin, diluents, lubricants, binders, disintegrating agents and the like in the case of powders, pills, capsules, and tablets. Because of their ease in administration, tablets and capsules represent the most advantageous oral dosage unit forms, in which case solid pharmaceutical carriers are obviously employed. Also included are solid form préparations that can be converted, shortly before use, to liquid forms.
It is especially advantageous to formulate the aforementioned pharmaceutical compositions in unit dosage form for ease of administration and uniformity of dosage. Unit dosage form as used herein refers to physically discrète units suitable as unitary dosages, each unit containing a predetermined quantity of active ingrédient calculated to produce the desired therapeutic effect in association with the required pharmaceutical carrier. Examples of such unit dosage forms are tablets (including scored or coated tablets), capsules, pills, powder packets, wafers, suppositories, injectable solutions or suspensions and the like, and segregated multiples thereof.
Those of skill in the treatment of infectious diseases will be able to détermine the effective amount from the test results presented hereinafter. In general it is contemplated that an effective daily amount would be from 0.01 mg/kg to 50 mg/kg body weight, more preferably from 0.1 mg/kg to 10 mg/kg body weight. It may be appropriate to administer the required dose as two, three, four or more sub-doses at appropriate intervals throughout the day. Said sub-doses may be formulated as unit dosage forms, for example, containing 1 to 1000 mg, and in particular 5 to 200 mg of active ingrédient per unit dosage form.
The exact dosage and frequency of administration dépends on the particular compound of the invention used, the particular condition being treated, the severity
-8of the condition being treated, the âge, weight and general physical condition of the particular patient as well as other médication the individual may be taking, as is well known to those skilled in the art. Furthermore, it is évident that the effective amount may be lowered or increased depending on the response of the treated subject and/or depending on the évaluation of the physician prescribing the compounds of the instant invention. The effective amount ranges mentioned above are therefore only guidelines and are not intended to limit the scope or use of the invention to any extent.
The présent disclosure is also intended to include any isotopes of atoms présent in the compounds of the invention. For example, isotopes of hydrogen include tritium and deuterium and isotopes of carbon include C-13 and C-14.
The présent compounds used in the current invention may also exist in their stereochemically isomeric form, defining ail possible compounds made up of the same atoms bonded by the same sequence of bonds but having different threedimensional structures, which are not interchangeable. Unless otherwise mentioned or indicated, the Chemical désignation of compounds encompasses the mixture of ail possible stereochemically isomeric forms, which said compounds might possess. Said mixture may contain ail diastereomers and/or enantiomers of the basic molecular structure of said compound. Ail stereochemically isomeric forms of the compounds used in the présent invention either in pure form or in admixture with each other are intended to be embraced within the scope of the présent invention including any racemic mixtures or racemates.
Pure stereoisomeric forms of the compounds and intermediates as mentioned herein are defined as isomers substantially free of other enantiomeric or diastereomeric forms of the same basic molecular structure of said compounds or intermediates. In particular, the term 'stereoisomerically pure' concerns compounds or intermediates having a stereoisomeric excess of at least 80% (i. e. minimum 90% of one isomer and maximum 10% of the other possible isomers) up to a stereoisomeric excess of 100% (i.e. 100% of one isomer and none of the other), more in particular, compounds or intermediates having a stereoisomeric excess of 90% up to 100%, even more in particular having a stereoisomeric excess of 94% up to 100% and most in particular having a stereoisomeric excess of 97% up to 100%. The terms 'enantiomerically pure' and 'diastereomerically pure' should be understood in a similar way, but then having regard to the enantiomeric excess, respectively the diastereomeric excess of the mixture in question.
-9Pure stereoisomeric forms of compounds and intermediates used in this invention may be obtained by the application of art-known procedures. For instance, enantiomers may be separated from each other by the sélective crystallization of their diastereomeric salts with optically active acids or bases. Examples thereof are tartaric acid, dibenzoyltartaric acid, ditoluoyltartaric acid and camphosulfonic acid. Alternatively, enantiomers may be separated by chromatographie techniques using chiral stationary phases. Said pure stereochemically isomeric forms may also be derived from the corresponding pure stereochemically isomeric forms of the appropriate starting materials, provided that the reaction occurs stereospecifically. Preferably, if a spécifie stereoisomer is desired, said compound will be synthesized by stereospecific methods of préparation. These methods will advantageously employ enantiomerically pure starting materials.
The compounds of formula (I) of the présent invention ail hâve at least one chiral carbon atom as indicated in the figure below by the carbon atom labelled with * :
Due to the presence of said chiral carbon atom, a “compound of formula (I)” can be the (R)-enantiomer, the (S)-enantiomer, the racemic form, or any possible combination of the two individual enantiomers in any ratio. When the absolute (R)or (S)-configuration of an enantiomer is not known, this enantiomer can also be identified by indicating whether the enantiomer is dextrorotatory (+)- or levorotatory (-)- after measuring the spécifie optical rotation of said particular enantiomer.
In an aspect the présent invention relates to a first group of compound of formula (I) wherein the compounds of formula (I) hâve the (+) spécifie rotation.
In a further aspect the présent invention relates to a second ground of compounds of formula (I) wherein the compounds of formula (I) hâve the (-) spécifie rotation.
-10Examples LC/MS methods
The High Performance Liquid Chromatography (HPLC) measurement was performed using a LC pump, a diode-array (DAD) or a UV detector and a column as specified in the respective methods. If necessary, additional detectors were included (see table of methods below).
Flow from the column was brought to the Mass Spectrometer (MS) which was configured with an atmospheric pressure ion source. It is within the knowledge of the skilled person to set the tune parameters (e.g. scanning range, dwell time...) in order to obtain ions allowing the identification of the compound’s nominal monoisotopic molecular weight (MW). Data acquisition was performed with appropriate software.
Compounds are described by their experimental rétention times (Rt) and ions. If not specified differently in the table of data, the reported molecular ion corresponds to the [M+H]+ (protonated molécule) and/or [M-H]' (deprotonated molécule). In case the compound was not directly ionizable the type of adduct is specified (i.e. [M+NH4]+, [M+HCOO]', etc...). For molécules with multiple isotopic patterns (Br, Cl), the reported value is the one obtained for the lowest isotope mass. Ail results were obtained with experimental uncertainties that are commonly associated with the method used.
Hereinafter, “SQD” means Single Quadrupole Detector, “MSD” Mass Sélective Detector, “RT” room température, “BEH” bridged ethylsiloxane/silica hybrid, “DAD” Diode Array Detector, ”HSS” High Strength silica.
LC/MS Method codes (Flow expressed in mL/min; column température (T) in °C; Run time in minutes)
Method code | Instrument | Column | Mobile phase | Gradient | Flow Col T | Run time (min) |
LC-A | Waters: Acquity® UPLC®DAD-Quattro Micro™ | Waters: BEH C18(1.7pm, 2.1x100mm) | A: 95% CH3COONH4 7mM/5% CH3CN, B: CH3CN | 84.2% A for 0.49 min, to 10.5% A in 2.18 min, held for 1.94 min, back to 84.2% A in 0.73 min, held for 0.73 min. | 0.343 mL/min 40°C | 6.2 |
Method code | Instrument | Column | Mobile phase | Gradient | Flow Col T | Run time (min) |
LC-B | Waters: Acquity® H-Class DAD and SQD2TM | Waters BEH® C18(1.7pm, 2.1x100mm) | A: CH3COONH4 7mM 95%/ CH3CN 5%, B: CH3CN | 84.2% A/15.8% B to 10.5% A in 2.18 min, held for 1.96 min, back to 84.2% A/15.8% B in 0.73 min, held for 0.49 min. | 0.343 mL/min 40°C | 6.1 |
LC-C | Waters: Acquity® UPLC®- DADAcquity® TQ detector | Waters: HSS C18 (1.8μηΊ, 2.1x50mm) | A: 0.1% HCOOH B: CH3CN | 50% A to 10% A in 3.5 min, held for 1.5 min. | 0.5 mL/min 40°C | 5 |
LC-D | Waters: Acquity® UPLC®- DAD-SQD | Waters: BEH C18(1.7μm, 2.1x50mm) | A: 10mM CH3COONH4 in 95% H2O + 5% CH3CN B: CH3CN | from 95% A to 5% A in 1.3 min, held for 0.7 min. | 0.8 mL/min 55°C | 2 |
SFC/MS methods
The SFC measurement was performed using an Analytical Supercritical fluid chromatography (SFC) system composed by a binary pump for delivering carbon 5 dioxide (CO2) and modifier, an autosampler, a column oven, a diode array detector equipped with a high-pressure flow cell standing up to 400 bars. If configured with a Mass Spectrometer (MS) the flow from the column was brought to the (MS). It is within the knowledge of the skilled person to set the tune parameters (e.g. scanning range, dwell time...) in order to obtain ions allowing the 10 identification of the compound’s nominal monoisotopic molecular weight (MW).
Data acquisition was performed with appropriate software.
Analytical SFC/MS Methods (Flow expressed in mL/min; column température (T) in °C; Run time in minutes, Backpressure (BPR) in bars.
Method code | column | mobile phase | gradient | Flow | Run time |
Col T | BPR | ||||
SFC-A | Daicel Chiralcel® OD3 column (3pm, 100 x 4.6 mm) | A:CO2 B: IPrOH (+0.3% IPrNH2) | 40% B hold 3 min | 3.5 35 | 3 105 |
SFC-B | Daicel Chiralcel® ODH column (5 pm, 150 x 4.6 mm) | A:CO2 B: MeOH | 40% B hold 7 min | 3 35 | 7 100 |
Daicel Chiralcel® OD- | A:CO2 B: iPrOH | 3 | 7 | ||
SFC-C | H column (5 pm, 150x 4.6 mm) | 40% B hold 7 min | 35 | 100 | |
Daicel Chiralpak® AD- | A:CO2 | 3 | 7 | ||
SFC-D | H column (5 pm, 150 x | B: iPrOH | 50% B hold 7 min | — | ------ |
4.6 mm) | (+0.3% iPrNH2) | 35 | 100 | ||
Daicel Chiralcel® OD- | A:CO2 B: EtOH | 3 | 7 | ||
SFC-E | H column (5 pm, 150 x 4.6 mm) | 30% B hold 7 min | 35 | 100 | |
Daicel Chiralcel® OD- | A:CO2 B: iPrOH | 3 | 7 | ||
SFC-F | H column (5pm, 150 x 4.6 mm) | 30% B hold 7 min | 35 | 100 | |
Daicel Chiralcel® OD- | A:CO2 | 30% B hold 7 min | 3 | 7 | |
SFC-G | H column (3 pm, 150 x 4.6 mm) | B: IPrOH (+0.3% IPrNH2) | 35 | 100 | |
Daicel Chiralpak® IC | A:CO2 | 3 | 7 | ||
SFC-H | column (5 pm, 150x | B: IPrOH | 30% B hold 7 min | — | — |
4.6 mm) | (+0.3% iPrNH2) | 35 | 100 | ||
Daicel Chiralpak® AD- | A:CO2 | 3.5 | 3 | ||
SFC-I | 3 column (3 pm, 100 x | B: iPrOH | 50% B hold 3 min | — | — |
4.6 mm) | (+0.3% IPrNH2) | 35 | 103 | ||
SFC-J | Daicel Chiralpak® AS3 column (3.0 pm, 150 x 4.6 mm) | A:CO2 B: EtOH (+0.2% iPrNH2 +3% H2O) | 10%-50% B in 6 min, hold 3.5 min | 2.5 40 | 9.5 110 |
-13Meltinq Points
Values are either peak values or melt ranges, and are obtained with experimental uncertainties that are commonly associated with this analytical method.
DSC823e (indicated as DSC)
For a number of compounds, melting points were determined with a DSC823e (Mettler-Toledo). Melting points were measured with a température gradient of 10°C/minute. Maximum température was 300°C.
Optical Rotations:
Optical rotations were measured on a Perkin-Elmer 341 polarimeter with a sodium lamp and reported as follows: [α]° (λ, c g/100ml, solvent, T°C).
[α]λ τ = (100a) / (/ x c) : where I is the path length in dm and c is the concentration in g/100 ml for a sample at a température T (°C) and a wavelength λ (in nm). If the wavelength of light used is 589 nm (the sodium D line), then the symbol D might be used instead. The sign of the rotation (+ or -) should always be given. When using this équation the concentration and solvent are always provided in parenthèses after the rotation. The rotation is reported using degrees and no units of concentration are given (it is assumed to be g/100 ml).
Example 1 : synthesis of 4-(3-((1-(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 1) and chiral séparation into Enantiomers 1Aand 1B
Chiral séparation
Enantiomers 1Aand 1B
Synthesis of intermediate 1a:
To a mechanically stirred solution of tert-butyl 4-bromobutanoate [CAS 11066191-1] (42.3 g, 0.19 mol) in DMF (600 mL) was added in portions a solid mixture of 3-amino-5-methoxyphenol [CAS 162155-27-3] (26.4 g, 0.19 mol) and CS2CO3 (123.6 g, 0.379 mol). The reaction was stirred at 60°C for 65 h, and allowed to reach room température. The mixture was poured out into H2O (2.5 L). The product was extracted with Et2O (2 times). The combined organic layers were washed with brine, dried over MgSO4 and filtered off. The solvent was evaporated under reduced pressure, and then co-evaporated with toluene. The residue was purified via Normal Phase HPLC (Stationary phase: silica gel 60A 25-40 pm (Merck), Mobile phase: gradient from 20% EtOAc, 80% heptane to 60% EtOAc, 40% heptane) yielding tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (27 g).
Synthesis of intermediate 1b:
A mixture of methyl 2-bromo-2-(4-fluorophenyl)acetate [CAS 71783-54-5] (0.400 g, 1.62 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (0.547 g, 1.94 mmol) and triethylamine (0.337 mL, 2.43 mmol) in CH3CN (4 mL) was heated in a microwave oven at 100°C for 20 min. The reaction mixture was diluted with EtOAc and washed with 1N HCl. The organic phase was washed with H2O and brine, dried over MgSO4, filtered and concentrated under reduced pressure. The residue was purified by flash chromatography on silica gel using a gradient of EtOAc (2% to 20%) in heptane to give tert-butyl 4-(3-((1-(4-fluorophenyl)-2methoxy-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 1b (0.511 g).
-15Synthesis of intermediate 1c:
To a solution of tert-butyl 4-(3-((1 -(4-fluorophenyl)-2-methoxy-2-oxoethyl)amino)-5methoxyphenoxy)butanoate 1b (0.510 g, 1.14 mmol) in a solvent mixture of THF (3 mL), MeOH (3 mL) and H2O (3 mL) was added lithium hydroxide (0.239 g, 5.70 mmol). The reaction mixture was stirred at room température for 2 h. The reaction mixture was partially concentrated under reduced pressure to remove the organic solvents. The residue was acidified with 1N HCl and extracted with CH2CI2. The organic phase was dried over MgSO4, filtered and concentrated under reduced pressure. The residue was purified by flash chromatography on silica gel using a gradient of MeOH (0% to 10%) in CH2CI2 (containing 2% of acetic acid) to give 2-((3-(4-(tert-butoxy)-4-oxobutoxy)-5-methoxyphenyl)amino)-2-(4-fluorophenyl)acetic acid 1c (0.326 g).
Synthesis of intermediate 1d:
To a solution of 2-((3-(4-(tert-butoxy)-4-oxobutoxy)-5-methoxyphenyl)amino)-2(4-fluorophenyl)acetic acid 1c (0.326 g, 0.75 mmol) in DMF (6 mL) were added HATU (0.286 g, 0.75 mmol), triethylamine (0.418 mL, 3.01 mmol) and 6-(trifluoromethyl)indoline [CAS 181513-29-1] (0.141 g, 0.75 mmol). The reaction mixture was stirred at room température for 3 h. The reaction mixture was diluted with EtOAc and washed with 1N HCl. The organic phase was washed with an aqueous saturated NaHCO3 solution and brine, dried over MgSO4, filtered and concentrated under reduced pressure. The residue was purified by flash chromatography on silica gel using a gradient of EtOAc (5% to 50%) in heptane to give tert-butyl 4-(3-((1 -(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl) amino)-5-methoxyphenoxy)butanoate 1d (0.134 g).
Synthesis of Compound 1 and chiral séparation into Enantiomers 1A and 1B: To a solution of tert-butyl 4-(3-((1 -(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 1d (0.134 g, 0.22 mmol) in CH2CI2 (3 mL) was added a 4M hydrogen chloride solution in dioxane (3 mL, 12 mmol). The reaction mixture was stirred at room température overnight. The reaction mixture was concentrated under reduced pressure. The residue was triturated with a mixture of Et2O/heptane. The solids were filtered off and dried under vacuum to give 4-(3-((1 -(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin1-yl)ethyl)amino)-5-methoxyphenoxy) butanoic acid (Compound 1, 103 mg) as a racemic mixture.
The enantiomers of Compound 1 (1.3 g) were separated via Préparative SFC (Stationary phase: Chiralcel® Diacel OD 20 x 250 mm, Mobile phase: CO2,
-16Ethanol). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer was further purified by flash chromatography (Stationary phase: Grâce Reveleris® silica 40 g, Mobile phase: heptane/EtOAc/EtOH/HOAc gradient 100/0/0/0 to 0/75/24.5/0.5). The desired fractions were combined, evaporated under reduced pressure, and co-evaporated with EtOAc, and then with MeOH/H2O. The residue was stirred up in H2O (15 mL) + MeOH (1.5 mL) for 45 minutes, filtered off, washed (4x) with MeOH/H2O (4/1), and dried under vacuum at 45°C to provide Enantiomer 1A (475 mg). The second eluted enantiomer was further purified by flash chromatography (Stationary phase: Grâce Reveleris® silica 40 g, Mobile phase: heptane/EtOAc/EtOH/HOAc gradient 100/0/0/0 to 0/75/24.5/0.5). The desired fractions were combined, evaporated under reduced pressure, and co-evaporated with EtOAc, and then with MeOH/H2O. The residue was stirred up in H2O (15 mL) + MeOH (1.5 mL) for 75 minutes, filtered off, washed (4x) with MeOH/H2O (4/1 ), and dried under vacuum at 45°C to provide Enantiomer 1B (461 mg).
Compound 1:
1H NMR (300 MHz, DMSO-d6) δ ppm 1.80 -1.94 (m, 2 H) 2.22 - 2.48 (m, 2 H) 3.09 - 3.27 (m, 2 H) 3.62 (s, 3 H) 3.85 (t, J=6.2 Hz, 2 H) 3.91 - 4.06 (m, 1 H) 4.48 - 4.61 (m, 1 H) 5.57 (d, J=8.7 Hz, 1 H) 5.76 (s, 1 H) 5.94 (s, 1 H) 5.96 (s, 1 H) 6.39 (d, J=8.3 Hz, 1 H) 7.21 (t, J=8.7 Hz, 2 H) 7.35 - 7.49 (m, 2 H) 7.58 (dd, J=8A, 5.8 Hz, 2 H) 8.38 (s, 1 H) 12.1 (br. s., 1 H)
LC/MS (method LC-C): Rt 1.94 min, MH+ 547
Enantiomer 1A:
1H NMR (400 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.8 Hz, 2 H) 2.33 (t, J=7A Hz, 2 H) 3.14 - 3.29 (m, 2 H) 3.62 (s, 3 H) 3.85 (t, J=6.5 Hz, 2 H) 4.00 (td, J=10.5, 7.3 Hz, 1 H) 4.54 (td, J=10.4, 6.3 Hz, 1 H) 5.56 (d, J=8.6 Hz, 1 H) 5.76 (t, J=2.0 Hz, 1 H) 5.95 (dt, J=QA, 1.8 Hz, 2 H) 6.36 (d, J=8.8 Hz, 1 H) 7.20 (t, J=8.9 Hz, 2 H) 7.34 - 7.41 (m, 1 H) 7.42 - 7.49 (m, 1 H) 7.52 - 7.62 (m, 2 H) 8.38 (br s, 1 H) 12.10 (brs, 1 H)
LC/MS (method LC-D): Rt 0.99 min, MH+ 547
[a]D 20: -49.0° (c0.41, DMF)
Chiral SFC (method SFC-J): Rt 2.92 min, MH+ 547 chiral purity 100%.
Enantiomer 1B:
1H NMR (400 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.33 (t, J=7.3 Hz, 2 H) 3.12 - 3.29 (m, 2 H) 3.62 (s, 3 H) 3.85 (t, J=6.5 Hz, 2 H) 4.00 (td, J=10.4,
7.2 Hz, 1 H) 4.54 (td, J=10.4, 6.3 Hz, 1 H) 5.56 (d, J=8.8 Hz, 1 H) 5.76 (t, J=2A Hz, 1 H) 5.95 (dt, J=9.1, 2.0 Hz, 2 H) 6.36 (d, J=8.8 Hz, 1 H) 7.20 (t, J=8.2 Hz, 2 H) 7.35 - 7.41 (m, 1 H) 7.42 - 7.48 (m, 1 H) 7.53 - 7.62 (m, 2 H) 8.38 (br s, 1 H) 12.11 (brs, 1 H)
LC/MS (method LC-D): Rt 1.00 min, MH+ 547
[a]D 20: +49.5° (c 0.525, DMF)
Chiral SFC (method SFC-J): Rt2.81 min, MH+ 547, chiral purity 100%.
Example 2: synthesis of 4-(3-((1-(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 2) and chiral séparation into Enantiomers 2Aand 2B.
Enantiomers 2A and 2B
Synthesis of intermediate 2a:
A mixture of 6-(trifluoromethoxy)indoline [CAS 959235-95-1] (2 g, 9.84 mmol), 2-(4-fluorophenyl)acetic acid [CAS 405-50-5] (1.67 g, 10.8 mmol), HATU (5.6 g, 14.8 mmol) and diisopropylethylamine (4.9 mL, 29.5 mmol) in DMF (40 mL) was stirred at room température for 12 h. Water was added and the precipitate was filtered off. The residue was taken up with EtOAc. The organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc gradient 90/10 to 60/40). The pure fractions were combined and the solvent was concentrated under reduced pressure to give 2-(4-fluorophenyl)-1-(6-(trifluoromethoxy)indolin1-yl)ethanone 2a (2.5 g).
-18Synthesis of intermediate 2b:
At -78°C, under a N2 flow, LiHMDS 1.5 M in THF (9.82 mL, 14.7 mmol) was added dropwise to a mixture of 2-(4-fluorophenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 2a (2.5 g, 7.37 mmol) in THF (40 mL). The mixture was stirred for 15 min at -78°C and a solution of /V-bromosuccinimide (1.44 g, 8.1 mmol) in THF (30 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated aqueous solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give, after précipitation from CH3CN/diisopropyl ether, 2-bromo-2-(4-fluorophenyl)-1 -(6-(trifluoromethoxy)indolin-1-yl)ethanone 2b (3 g). The compound was used as such in the next step.
Synthesis of intermediate 2c:
A mixture of 2-bromo-2-(4-fluorophenyl)-1-(6-(trifluorornethoxy)indolin-1-yl)ethanone 2b (1.1 g, 2.63 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (0.74 g, 2.63 mmol) and diisopropylethylamine (0.54 mL, 3.15 mmol) in CH3CN (40 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure. The residue was diluted with EtOAc, washed with 1N HCl and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The compound was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness. The residue was crystallized from diisopropyl ether/petroleum ether, to give tert-butyl 4-(3-((1(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 2c (1.25 g).
Synthesis of Compound 2 and chiral séparation into Enantiomers 2A and 2B: A solution of tert-butyl 4-(3-((1 -(4-fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 2c (1.5 g, 2.42 mmol) in 4M HCl in dioxane (15 mL) and stirred at 5°C for 3 h and at room température for 3 h. The precipitate was filtered off and dried to afford 4-(3-((1-(4-fluorophenyl)-2oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid as an HCl sait (Compound 2, 1.4 g, 0.76 equiv. HCl, 0.1 equiv. H2O). Compound 2 (HCl sait) was neutralized prior to chiral séparation by treatment of a solution of Compound 2 (HCl sait) in EtOAc or CH2CI2 with 1N NaOH and évaporation of organic layer under reduced pressure. The enantiomers of Compound 2 (1.3 g) were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 30 mm, Mobile phase: 50% CO2, 50% MeOH) and
-19further purified via reverse phase chromatography (Stationary phase: YMC-actus Triart-C18 10 pm 150 x 30 mm, Mobile phase: gradient from 60% HCOONH4 0.6 g/L pH=3.5, 40% CH3CN to 0% HCOONH4 0.6 g/L pH=3.5, 100% CH3CN). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (205 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 2A (168 mg). The second eluted enantiomer (259 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 2B (180 mg).
Compound 2:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.05 - 3.28 (m, 2 H) 3.62 (s, 3 H) 3.85 (t, J=6.5 Hz, 2 H) 4.01 (td, J=10.3, 7.4 Hz, 1 H) 4.53 (td, 7=10.2, 6.6 Hz, 1 H) 5.56 (s, 1 H) 5.76 (s, 1 H) 5.96 (br d, 7=10.4 Hz, 2 H) 7.01 (br d, 7=7.9 Hz, 1 H) 7.21 (t, 7=8.8 Hz, 2 H) 7.33 (d, 7=8.2 Hz, 1 H) 7.57 (dd, 7=8.5, 5.7 Hz, 2 H) 8.04 (s, 1 H) LC/MS (method LC-A): Rt 2.80 min, MH+ 563 Melting point: 136°C
Enantiomer 2A:
1H NMR (500 MHz, DMSO-76) δ ppm 1.86 (quin, 7=6.9 Hz, 2 H) 2.33 (t, 7=7.3 Hz, 2 H) 3.05 - 3.26 (m, 2 H) 3.61 (s, 3 H) 3.84 (t, 7=6.3 Hz, 2 H) 3.96 - 4.08 (m, 1 H) 4.46 - 4.60 (m, 1 H) 5.55 (d, 7=8.8 Hz, 1 H) 5.75 (s, 1 H) 5.95 (br d, 7=11.0 Hz, 2 H) 6.41 (br d, 7=8.5 Hz, 1 H) 7.01 (br d, 7=8.2 Hz, 1 H) 7.21 (t, 7=8.8 Hz, 2 H) 7.33 (d, 7=8.2 Hz, 1 H) 7.57 (dd, 7=8.2, 5.7 Hz, 2 H) 8.04 (s, 1 H) 12.19 (br s, 1 H) LC/MS (method LC-A): Rt 2.87 min, MH+ 563 [a]D20: -46.3° (c 0.27, DMF)
Chiral SFC (method SFC-B): Rt 1.75 min, MH+ 563, chiral purity 100%.
Enantiomer 2B:
1H NMR (500 MHz, DMSO-76) δ ppm 1.86 (quin, 7=6.9 Hz, 2 H) 2.32 (t, 7=7.3 Hz, 2 H) 3.05 - 3.26 (m, 2 H) 3.61 (s, 3 H) 3.84 (t, 7=6.5 Hz, 2 H) 4.01 (td, 7=10.3, 7.4 Hz, 1 H) 4.53 (td, 7=10.2, 6.0 Hz, 1 H) 5.55 (d, 7=8.8 Hz, 1 H) 5.75 (s, 1 H) 5.95 (br d, 7=12.0 Hz, 2 H) 6.41 (d, 7=8.8 Hz, 1 H) 7.01 (br d, 7=7.9 Hz, 1 H) 7.20 (t, 7=8.7 Hz, 2 H) 7.33 (d, J=8.2 Hz, 1 H) 7.57 (dd, 7=8.5, 5.7 Hz, 2 H) 8.04 (s, 1 H) 11.49 -12.49 (m, 1 H)
LC/MS (method LC-A): Rt 2.87 min, MH+ 563
[a]D 20: +47.0° (c 0.27, DMF)
Chiral SFC (method SFC-B): Rt 3.83 min, MH+ 563, chiral purity 100%.
-20Example 3: synthesis of 4-(3-((1-(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 3) and chiral séparation into Enantiomers 3Aand 3B.
Synthesis of intermediate 3a:
A mixture of 6-(trifluoromethyl)indoline [CAS 181513-29-1] (3 g, 16.0 mmol), 2-(4-chlorophenyl)acetic acid [CAS 1878-66-6] (3.53 g, 20.8 mmol), HATU (9.1 g, 24.0 mmol) and diisopropylethylamine (7.95 mL, 48.1 mmol) in DMF (75 mL) was stirred at room température for 12 h. Water was added and the precipitate was filtered off. The residue was taken up with EtOAc. The organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc gradient 90/10 to 60/40). The pure fractions were combined and the solvent was concentrated under reduced pressure to give 2-(4-chlorophenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 3a (4.5 g).
Synthesis of intermediate 3b:
At -78°C, under a N2 flow, LiHMDS 1.5 M in THF (17.7 mL, 26.5 mmol) was added dropwise to a mixture of 2-(4-chlorophenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 3a (4.5 g, 13.3 mmol) in THF (65 mL). The mixture was stirred for 15 min at -78°C and a solution of /V-bromosuccinimide (2.6 g, 14.6 mmol) in THF (35 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the
-21solvent was evaporated under reduced pressure. The residue was taken up with diisopropyl ether. The precipitate was filtered off and discarded (residual succinimide). The filtrate was concentrated under reduced pressure to give 2-bromo-2-(4-chlorophenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 3b (5 g). The compound was used as such in the next step.
Synthesis of intermediate 3c:
A mixture of 2-bromo-2-(4-chlorophenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 3b (5 g, 11.9 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (3.3 g, 11.9 mmol) and diisopropylethylamine (2.47 mL, 14.3 mmol) in CH3CN (120 mL) was stirred at 70°C for 6 h. The mixture was concentrated under reduced pressure, diluted with EtOAc, and washed with 1N HCl and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The compound was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc gradient 90/10 to 60/40). The pure fractions were combined and evaporated to dryness to give tert-butyl 4-(3-((1 -(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 3c (1.6 g).
Synthesis of Compound 3 and chiral séparation into Enantiomers 3A and 3B: A solution of tert-butyl 4-(3-((1 -(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 3c (1.6 g, 2.58 mmol) in 4M HCl in dioxane (22 mL) was stirred at 5°C for 3 h and at room température for 8 h. The solution was concentrated under reduced pressure. The residue was taken up in CH3CN/diisopropyl ether. The precipitate was filtered off and dried to afford 4-(3-((1-(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5methoxyphenoxy)butanoic acid as an HCl sait (1.15 g, 0.95 equiv. HCl, 0.07 equiv. H2O). A minor part of the Compound 3 (HCl sait) was neutralized by treatment of a solution of Compound 3 (HCl sait) in EtOAc or CH2CI2 with 1N NaOH and évaporation of organic layer under reduced pressure to give Compound 3. The remaining amount of Compound 3 (HCl sait) was used for the chiral séparation: the enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 30 mm, Mobile phase: 50% CO2, 50% iPrOH). The first eluted enantiomer (470 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 3A (404 mg). The second eluted enantiomer (480 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 3B (433 mg).
-22Compound 3:
1H NMR (500 MHz, DMSO-J6) δ ppm 1.87 (quin, J=6.8 Hz, 2 H) 2.33 (t, J=7.3 Hz, 2 H) 3.18 - 3.27 (m, 2 H) 3.62 (s, 3 H) 3.85 (t, J=6.3 Hz, 2 H) 3.97 - 4.09 (m, 1 H) 4.46 - 4.59 (m, 1 H) 5.57 (d, J=8.6 Hz, 1 H) 5.76 (s, 1 H) 5.95 (br d, J=9.1 Hz, 2 H) 6.40 (brd, J=8.6 Hz, 1 H) 7.34 - 7.49 (m, 4 H) 7.55 (d, J=8.6 Hz, 2 H) 8.38 (s, 1 H) 11.90-12.25 (m, 1 H)
LC/MS (method LC-A): Rt 2.88 min, MH+ 563
Melting point: 192°C
Enantiomer 3A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (br t, J=6.6 Hz, 2 H) 2.34 (br t, J=7A Hz, 2 H) 3.15 - 3.31 (m, 2 H) 3.62 (s, 3 H) 3.85 (br t, J=6.1 Hz, 2 H) 3.97 4.09 (m, 1 H) 4.48 - 4.60 (m, 1 H) 5.59 (br d, J=8.5 Hz, 1 H) 5.77 (br s, 1 H) 5.95 (br d, J=11.3 Hz, 2 H) 6.44 (br d, J=8.5 Hz, 1 H) 7.36 - 7.50 (m, 4 H) 7.56 (br d, J=8.2 Hz, 2 H) 8.38 (s, 1 H) 12.17 (br s, 1 H)
LC/MS (method LC-A): Rt 2.93 min, MH+ 563
[a]D 20: -42.4° (c 0.25, DMF)
Chiral SFC (method SFC-C): Rt 2.12 min, MH+ 563, chiral purity 100%.
Enantiomer 3B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.7 Hz, 2 H) 2.34 (br t, J-7A Hz, 2 H) 3.15 - 3.31 (m, 2 H) 3.62 (s, 3 H) 3.85 (br t, J=6.3 Hz, 2 H) 3.97 4.10 (m, 1 H) 4.49 - 4.61 (m, 1 H) 5.59 (br d, J=8.8 Hz, 1 H) 5.77 (s, 1 H) 5.95 (br d, J=11.3 Hz, 2 H) 6.44 (br d, J=8.5 Hz, 1 H) 7.36 - 7.49 (m, 4 H) 7.56 (br d, J=8.2 Hz, 2 H) 8.38 (s, 1 H) 12.17 (br s, 1 H LC/MS (method LC-A): Rt 2.93 min, MH+ 563 [a]D20: +50.7° (c 0.27, DMF)
Chiral SFC (method SFC-C): Rt 4.87 min, MH+ 563, chiral purity 100%.
Example 4: synthesis of 4-(3-((1-(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 4) and chiral séparation into Enantiomers 4Aand 4B.
Synthesis of intermediate 4a:
A mixture of 6-(trifluoromethoxy)indoline [CAS 959235-95-1] (2 g, 9.84 mmol), 2-(4-chlorophenyl)acetic acid [CAS 1878-66-6] (1.85 g, 10.8 mmol), HATU (5.6 g, 14.8 mmol) and diisopropylethylamine (4.9 mL, 29.5 mmol) in DMF (40 mL) was stirred at room température for 12 h. Water was added and the precipitate was filtered off. The residue was taken up with EtOAc. The organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc gradient 90/10 to 60/40). The pure fractions were combined and the solvent was concentrated under reduced pressure to give 2-(4-chlorophenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 4a (3 g).
Synthesis of intermediate 4b:
At -78°C, under N2 flow, LiHMDS 1.5 M in THF (11.2 mL, 16.9 mmol) was added dropwise to a mixture of 2-(4-chlorophenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 4a (3 g, 8.43 mmol) in THF (50 mL). The mixture was stirred for 15 min at -78°C and a solution of A/-bromosuccinimide (1.65 g, 9.3 mmol) in THF (30 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chlorophenyl)-1 (6-(trifluoromethoxy)indolin-1-yl)ethanone 4b (3.6 g). The compound was used as such in the next step.
-24Synthesis of intermediate 4c:
A mixture of 2-bromo-2-(4-chlorophenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 4b (3.6 g, 8.3 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (2.3 g, 8.3 mmol) and diisopropylethylamine (1.7 mL, 9.94 mmol) in CH3CN (80 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc, and washed with 1N HCl and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The compound was purified by flash chromatography on silica gel (15-40 pm, 120 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give, after crystallization from diisopropyl ether, tert-butyl 4-(3-((1 -(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 4c (2.6 g).
Synthesis of Compound 4 and chiral séparation into Enantiomers 4A and 4B: A solution of tert-butyl 4-(3-((1 -(4-chlorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 4c (2.4 g, 3.8 mmol) in 4M HCl in dioxane (24 mL) was stirred at 5°C for 3 h and at room température for 3h. The precipitate was filtered off and dried to afford 4-(3-((1 -(4-chlorophenyl)-2-oxo2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid as an HCl sait (Compound 4, 2 g, 0.8 equiv. HCl, 0.07 equiv. H2O). Compound 4 (2 g, HCl sait) was neutralized prior to chiral séparation by treatment of a solution of Compound 4 (HCl sait) in ethylacetate with 1N NaOH and évaporation of the organic layer under reduced pressure. The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 30 mm, Mobile phase: 50% CO2, 50% iPrOH (+ 0.3% iPrNH2)) and further purified via Préparative achiral SFC (Stationary phase: Cyano® 6 pm 150x21.2mm, Mobile phase: 80% CO2, 20% MeOH (+ 0.3% iPrNH2)). The product fractions were combined and evaporated under reduced pressure. The two enantiomers were taken up with EtOAc and washed with 1N HCl. The organic layers were separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The first eluted enantiomer was solidified from ether/diisopropyl ether to give Enantiomer 4A (616 mg). The second eluted enantiomer was solidified from ether/diisopropyl ether to give Enantiomer 4B (715 mg).
It is also possible to separate the enantiomers starting from the HCl sait of the racemate using the same conditions for chiral séparation.
-25Compound 4:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.07 - 3.28 (m, 2 H) 3.62 (s, 3 H) 3.85 (t, J=6.5 Hz, 2 H) 4.04 (td, J=10.5, 7.1 Hz, 1 H) 4.52 (td, J=10.3, 6.5 Hz, 1 H) 5.57 (s, 1 H) 5.76 (t, J=2.2 Hz, 1 H) 5.90 - 6.00 (m, 2 H) 7.01 (dd, J=8.2, 1.6 Hz, 1 H) 7.33 (d, J=8.2 Hz, 1 H) 7.41 - 7.48 (m, 2 H) 7.55 (d, J=8.5 Hz, 2 H) 8.03 (s, 1 H)
LC/MS (method LC-B): Rt 2.70 min, MH+ 579
Melting point: 150°C
Enantiomer 4A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=Q.7 Hz, 2 H) 2.34 (br t, J=7.3 Hz, 2 H) 3.08 - 3.27 (m, 2 H) 3.62 (s, 3 H) 3.85 (br t, J=6.3 Hz, 2 H) 3.99 4.11 (m, 1 H) 4.47 - 4.57 (m, 1 H) 5.57 (br s, 1 H) 5.76 (s, 1 H) 5.95 (br d, J=10.1 Hz, 2 H) 6.45 (br s, 1 H) 7.01 (br d, J=7.6 Hz, 1 H) 7.34 (br d, J=7.9 Hz, 1 H) 7.44 (brd, J=8.5 Hz, 2 H) 7.55 (brd, J=8.2 Hz, 2 H) 8.04 (brs, 1 H) 12.12 (br s, 1 H) LC/MS (method LC-A): Rt 2.95 min, MH+ 579
[a]D 20: -48.5° (c 0.27, DMF)
Chiral SFC (method SFC-A): Rt 1.13 min, MH+ 579, chiral purity 100%.
Enantiomer 4B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (br t, J=6.8 Hz, 2 H) 2.34 (br t, J=7.3 Hz, 2 H) 3.09 - 3.27 (m, 2 H) 3.62 (s, 3 H) 3.85 (br t, J=6.1 Hz, 2 H) 3.99 4.10 (m, 1 H) 4.46 - 4.59 (m, 1 H) 5.57 (s, 1 H) 5.76 (br s, 1 H) 5.95 (br d, J=10.1 Hz, 2 H) 6.45 (br s, 1 H) 7.01 (br d, J=7.9 Hz, 1 H) 7.34 (br d, J=7.9 Hz, 1 H) 7.44 (brd, J=8.2 Hz, 2 H) 7.55 (brd, J=8.2 Hz, 2 H) 8.04 (brs, 1 H) 12.12 (brs, 1 H) LC/MS (method LC-A): Rt 2.94 min, MH+ 579 [a]D20:+42.9° (c0.28, DMF)
Chiral SFC (method SFC-A): Rt 2.13 min, MH+ 579, chiral purity 100%.
-26Example 5: synthesis of 4-(3-((1 -(4-chlorophenyl)-2-(5-methoxy-6(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 5) and chiral séparation into Enantiomers 5Aand 5B.
H2, Pd/C (10%)
BHs-Pyridine
EtOH, HCl 6N
O’C, 2h
AcOH
EtOH/water
Synthesis of intermediate 5a:
A mixture of 1-methoxy-4-nitro-2-(trifluoromethyl)benzene [CAS 654-76-2] (24.5 g, 110.8 mmol) and 4-chlorophenoxyacetonitrile [CAS 3598-13-8] (20.4 g, 121.9 mmol) in DMF (100 mL) was added dropwise over 30 min to a stirred solution of tBuOK (27.35 g, 243.7 mmol) in DMF (100 mL) at -10°C. After addition, the purple solution was maintained at -10°C for 1 h. 500 mL of ice-water and 500 mL of 6N HCl were added and the precipitate was filtered off, washed with water and dried under reduced pressure to afford 40.4 g of 2-(5-methoxy-2-nitro-4(trifluoromethyl)phenyl)acetonitrile 5a (used as such in the next step).
Synthesis of intermediate 5b:
A solution of 2-(5-methoxy-2-nitro-4-(trifluoromethyl)phenyl)acetonitrile 5a (26 g , 99.9 mmol) in ethanol/water (9/1) (500 mL) and AcOH (5.2 mL) was hydrogenated for 1 h at a pressure of 3.5 Bar with 10% Pd/C (15.3 g) as the catalyst. The reaction mixture was filtered through a pad of celite® and the filter cake was washed with a solvent mixture of CH2CI2 and CH3OH. The filtrate was concentrated under reduced pressure. The residue was filtered through a glass filter charged with silica 60-200 pm using heptane/EtOAc 80/20 as the eluent. The
-27fractions containing the expected compound were combined and the solvent was concentrated under reduced pressure to give 5-methoxy-6-(trifluoromethyl)-1/-/indole 5b (15.6 g).
Synthesis of intermediate 5c:
At 0°C, BHa-Pyridine (23.5 mL, 232.4 mmol) was added dropwise to a solution of 5-methoxy-6-(trifluoromethyl)-1H-indole 5b (10 g, 46.5 mmol) in EtOH (60 mL). 6N HCl (140 mL) was slowly added while maintaining the température below 10°C. The mixture was stirred at 0°C for 2 h. Water (200 mL) was added and the mixture was basified to pH 8-9 with a concentrated aqueous solution of NaOH (the reaction température was kept below 20°C). The precipitate was filtered off, washed with water (twice) and co-evaporated under reduced pressure with toluene to give 5-methoxy-6-(trifluoromethyl)indoline 5c (9 g).
Synthesis of intermediate 5d:
A mixture of 5-methoxy-6-(trifluoromethyl)indoline 5c (2 g, 9.21 mmol), 2-(4-chlorophenyl)acetic acid [CAS 1878-66-6] (1.73 g, 10.1 mmol), HATU (5.25 g, 13.8 mmol) and diisopropylethylamine (4.6 mL, 27.6 mmol) in DMF (40 mL) was stirred at room température for 12 h. Water was added and the precipitate was filtered off. The residue was taken up with EtOAc. The organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc gradient 90/10 to 60/40). The pure fractions were combined and the solvent was concentrated under reduced pressure to give 2-(4-chlorophenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 5d (3 g).
Synthesis of intermediate 5e:
At -78°C, under N2 flow, LiHMDS 1 M in THF (17.3 mL, 17.3 mmol) was added dropwise to a mixture of 2-(4-chlorophenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 5d (3.2 g, 8.65 mmol) in THF (45 mL). TMSCI (1.32 mL, 10.4 mmol) was added dropwise. The mixture was stirred for 15 min at -78°C and a solution of /V-bromosuccinimide (1.85 g, 10.4 mmol) in THF (30 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CL The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chlorophenyl)-1-(5-methoxy-619265
-28(trifluoromethyl)indolin-l-yl)ethanone 5e (3.1 g). The compound was used as such in the next step.
Synthesis of intermediate 5f:
A mixture of 2-bromo-2-(4-chlorophenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1yl)ethanone 5e (3.5 g, 7.8 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (2.2 g, 7.8 mmol) and diisopropylethylamine (1.6 mL, 9.4 mmol) in CH3CN (80 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc and washed with 1N HCl and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give, after crystallization from diisopropyl ether, tert-butyl 4-(3-((1 -(4-chlorophenyl)-2-(5-methoxy-6(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 5f (2.1 g).
Synthesis of Compound 5 and chiral séparation into Enantiomers 5A and 5B: A solution of tert-butyl 4-(3-((1-(4-chlorophenyl)-2-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 5f (3.1 g, 4.77 mmol) in 4M HCl in dioxane (42.2 mL) was stirred at 5°C for 3 h and at room température for 8 h. The precipitate was filtered off and dried to afford 4-(3-((1 -(4-chlorophenyl)-2-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid as an HCl sait (Compound 5, 2 g). The Enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralpak® IA 5 pm 250 x 20 mm, Mobile phase: 50% CO2, 50% iPrOH (+ 0.3% iPrNH2 + 10% CH2CI2)). The product fractions were combined and evaporated under reduced pressure. The two enantiomers were taken up with EtOAc and washed with 1N HCl. The organic layers were separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The first eluted enantiomer (847 mg) was solidified from Petroleum ether/diisopropyl ether to give Enantiomer 5A (772 mg). The second eluted enantiomer (840 mg) was solidified from ether/diisopropyl ether to give Enantiomer 5B (724 mg).
Compound 5:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.14 - 3.35 (m, 2 H) 3.61 (s, 3 H) 3.80 - 3.89 (m, 5 H) 3.94 - 4.04 (m, 1 H)
4.51 (td, J=10.2, 6.3 Hz, 1 H) 5.55 (s, 1 H) 5.76 (s, 1 H) 5.95 (br d, J=11.7 Hz, 2 H) 7.23 (s, 1 H) 7.43 (d, J=8.2 Hz, 2 H) 7.55 (d, J=8.2 Hz, 2 H) 8.34 (s, 1 H) LC/MS (method LC-A): Rt 2.86 min, MH+ 593
Melting point: 130°C
Enantiomer 5A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=Q.9 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.12 - 3.31 (m, 2 H) 3.62 (s, 3 H) 3.81 - 3.89 (m, 5 H) 3.94 - 4.05 (m, 1 H) 4.45 - 4.56 (m, 1 H) 5.55 (br s, 1 H) 5.76 (s, 1 H) 5.95 (br d, J=11.0 Hz, 2 H) 6.40 (br s, 1 H) 7.23 (s, 1 H) 7.44 (d, J=8.2 Hz, 2 H) 7.56 (d, J=8.5 Hz, 2 H) 8.34 (s, 1 H) 12.14 (brs, 1 H)
LC/MS (method LC-A): Rt 2.85 min, MH+ 593
[a]D 20: -43.2° (c 0.25, DMF)
Chiral SFC (method SFC-D): Rt 2.16 min, MH+ 593, chiral purity 100%.
Enantiomer 5B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.8 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.13 - 3.33 (m, 2 H) 3.62 (s, 3 H) 3.79 - 3.88 (m, 5 H) 3.94 - 4.03 (m, 1 H) 4.51 (td, J=10.3, 6.1 Hz, 1 H) 5.54 (br s, 1 H) 5.75 (s, 1 H) 5.95 (br d, J=11.3 Hz, 2 H) 6.40 (br s, 1 H) 7.23 (s, 1 H) 7.43 (d, J=8.2 Hz, 2 H) 7.55 (d, J=8.5 Hz, 2 H) 8.34 (s, 1 H) 12.14 (brs, 1 H)
LC/MS (method LC-A): Rt 2.85 min, MH+ 593
[a]D 20:+41.4° (c 0.28, DMF)
Chiral SFC (method SFC-D): Rt 3.75 min, MH+ 593, chiral purity 99.37%.
Example 6: synthesis of 4-(3-((1 -(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 6) and chiral séparation into Enantiomers 6A and 6B.
Synthesis of intermediate 6a:
A mixture of 6-(trifluoromethyl)indoline [CAS 181513-29-1] (2 g, 10.7 mmol), 2-(4-chloro-2-methoxyphenyl)acetic acid [CAS 170737-95-8] (2.36 g, 11.8 mmol), HATU (6.1 g, 16 mmol) and diisopropylethylamine (5.3 mL, 32 mmol) in DMF (50 mL) was stirred at room température for 12h. Water was added and the precipitate was filtered off. The residue was taken up with EtOAc. The organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc gradient 90/10 to 60/40). The pure fractions were combined and the solvent was concentrated under reduced pressure to give 2-(4-chloro-2methoxyphenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 6a (3.9 g).
Synthesis of intermediate 6b:
At -78°C, under a N2 flow, LiHMDS 1M in THF (13.5 mL, 13.5 mmol) was added dropwise to a mixture of 2-(4-chloro-2-methoxyphenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 6a (2.5 g, 6.76 mmol) in THF (40 mL). The mixture was stirred for 15 min at -78°C and a solution of /V-bromosuccinimide (1.32 g, 7.44 mmol) in THF (20 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2(4-chloro-2-methoxyphenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 6b (3 g). The compound was used as such in the next step.
-31Synthesis of intermediate 6c:
A mixture of 2-bromo-2-(4-chloro-2-methoxyphenyl)-1-(6-(trifluoromethyl)indolin1-yl)ethanone 6b (3 g, 6.69 mmol), ferf-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (1.88 g, 6.69 mmol) and diisopropylethylamine (1.4 mL, 8 mmol) in CH3CN (100 mL) was stirred at 70°C for 6 h. The mixture was concentrated under reduced pressure, diluted with EtOAc and washed with 1N HCl, and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The compound was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give fert-butyl 4-(3-((1(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5methoxyphenoxy)butanoate 6c (1.6 g).
Synthesis of Compound 6 and chiral séparation into Enantiomers 6A and 6B: A solution of fert-butyl 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 6c (1.53 g, 2.36 mmol) in 4M HCl in dioxane (20 mL) was stirred at 5°C for 3 h and at room température for 8 h. The solution was concentrated under reduced pressure. The residue was taken up in CH3CN/diisopropyl ether. The precipitate was filtered off and dried to afford 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 6) as an HCl sait (1.35 g, 0.67 equiv. HCl, 0.28 equiv. H2O). The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 3 0mm, Mobile phase: 65% CO2, 35% EtOH). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer was further purified via reverse phase chromatography (Stationary phase: YMC-actus Triart-C18 10 pm 150 x 30 mm, Mobile phase: gradient from 55% formic acid 0.1%, 45% CH3CN to 0% formic acid 0.1%, 100% CH3CN. The pure fractions were combined and evaporated under reduced pressure. The residue (417 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 6A (370 mg). The second eluted enantiomer was further purified via reverse phase chromatography (Stationary phase: YMC-actus Triart-C18 10 pm 150x30mm, Mobile phase: gradient from 55% formic acid 0.1%, 45% CH3CN to 0% formic acid 0.1%, 100% CH3CN. The pure fractions were combined and evaporated under reduced pressure. The residue (400 mg) then solidified from petroleum ether/diisopropyl ether to give Enantiomer 6B (363 mg).
-32Compound 6:
1H NMR (400 MHz, DMSO-d6) δ ppm 1.87 (br t, 7=6.6 Hz, 2 H) 2.33 (br t, 7=7.3 Hz, 2 H) 3.18 - 3.32 (m, 2 H) 3.61 (s, 3 H) 3.80 - 3.87 (m, 2 H) 3.90 (s, 3 H) 3.96 - 4.07 (m, 1 H) 4.31 - 4.45 (m, 1 H) 5.61 (s, 1 H) 5.76 (s, 1 H) 5.87 (br d, J=7.Q Hz, 2 H) 7.02 (brd, J=8A Hz, 1 H) 7.14 (s, 1 H) 7.32 (d, J=8A Hz, 1 H) 7.35 - 7.41 (m, 1 H) 7.43 - 7.50 (m, 1 H) 8.37 (s, 1 H) LC/MS (method LC-A): Rt 2.90 min, MH+ 593 Melting point: 130°C
Enantiomer 6A:
1H NMR (500 MHz, DMSO-76) δ ppm 1.87 (quin, 7=6.9 Hz, 2 H) 2.33 (t, J=7.3 Hz, 2 H) 3.24 (br dd, 7=18.6, 11.7 Hz, 2 H) 3.61 (s, 3 H) 3.80 - 3.87 (m, 2 H) 3.90 (s, 3 H) 3.97 - 4.06 (m, 1 H) 4.33 - 4.43 (m, 1 H) 5.61 (d, J=8.8 Hz, 1 H) 5.76 (s, 1 H) 5.87 (br d, J=10.4 Hz, 2 H) 6.43 (d, 7=8.5 Hz, 1 H) 7.03 (dd, 7=8.2, 1.9 Hz, 1 H) 7.15 (d, 7=1.6 Hz, 1 H) 7.32 (d, 7=8.2 Hz, 1 H) 7.39 (d, 7=7.9 Hz, 1 H) 7.46 (d, 7=7.9 Hz, 1 H) 8.37 (s, 1 H) 12.16 (brs, 1 H) LC/MS (method LC-A): Rt 2.99 min, MH+ 593 [a]D20: -28.6° (c 0.29, DMF)
Chiral SFC (method SFC-E): Rt 2.17 min, MH+ 593, chiral purity 100%.
Melting point: 178°C
Enantiomer 6B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, 7=6.9 Hz, 2 H) 2.33 (t, 7=7.3 Hz, 2 H) 3.24 (br dd, 7=18.8, 11.5 Hz, 2 H) 3.61 (s, 3 H) 3.83 (q, 7=6.2 Hz, 2 H) 3.90 (s, 3 H) 3.96 - 4.08 (m, 1 H) 4.32 - 4.43 (m, 1 H) 5.61 (d, 7=8.5 Hz, 1 H) 5.76 (s, 1 H) 5.87 (br d, 7=10.1 Hz, 2 H) 6.43 (br d, 7=8.5 Hz, 1 H) 7.03 (dd, 7=8.2, 1.6 Hz, 1 H) 7.15 (d, 7=1.6 Hz, 1 H) 7.32 (d, 7=8.2 Hz, 1 H) 7.39 (d, 7=7.6 Hz, 1 H) 7.46 (d, 7=7.9 Hz, 1 H) 8.37 (s, 1 H) 12.16 (brs, 1 H) LC/MS (method LC-A): Rt 3.00 min, MH+ 593 [a]D20:+32.1 ° (c 0.28, DMF)
Chiral SFC (method SFC-E): Rt 4.04 min, MH+ 593, chiral purity 100%.
Example 7: synthesis of 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-(5-methoxy6-(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 7) and chiral séparation into Enantiomers 7Aand 7B.
Synthesis of intermediate 7a:
A mixture of 5-methoxy-6-(trifluoromethyl)indoline 5c (1.5 g, 6.9 mmol), 2-(4-chloro-2-methoxyphenyl)acetic acid [CAS 170737-95-8] (1.4 g, 6.9 mmol), HATU (3.94 g, 10.4 mmol) and diisopropylethylamine (3.4 mL, 20.7 mmol) in DMF (40 mL) was stirred at room température for 12 h. Ice/water was added and the precipitate was filtered off. The residue was taken up with CH2CI2. The organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was crystallized from diisopropyl ether to give 2-(4-chloro-2-methoxyphenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 7a (2.48 g).
Synthesis of intermediate 7b:
At -78°C, under a N2 flow, LiHMDS 1M in THF (16.5 mL, 16.5 mmol) was added dropwise to a mixture of 2-(4-chloro-2-methoxyphenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 7a (3.3 g, 8.25 mmol) in THF (45 mL). TMSCI (1.26 mL, 9.91 mmol) was added dropwise. The mixture was stirred for 15 min at 78°C and a solution of AZ-bromosuccinimide (1.76 g, 9.91 mmol) in THF (30 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chloro-2-methoxyphenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 7b (3.5 g). The compound was used as such in the next step.
-34Synthesis of intermediate 7c:
A mixture of 2-bromo-2-(4-chloro-2-methoxyphenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 7b (3.5 g, 7.31 mmol), tert-butyl 4-(3-amino5-methoxyphenoxy)butanoate 1a (2 g, 7.31 mmol) and diisopropylethylamine (1.5 mL, 8.8 mmol) in CH3CN (80 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc and washed with 1N HCl, and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The compound was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give tertbutyl 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-(5-methoxy-6-(trifluoromethyl)indolin1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 7c (2.2 g).
Synthesis of Compound 7 and chiral séparation into Enantiomers 7A and 7B: A solution of tert-butyl 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-(5-methoxy-6(trifluoromethyl )indol in-1 -yl)-2-oxoethyl )am ino)-5-methoxyphenoxy)butanoate 7 c (2.1 g, 3.1 mmol) in 4M HCl in dioxane (27.4 mL) was stirred at 5°C for 3 h and at room température for 8 h. The solution was concentrated under reduced pressure. The residue was taken up in CH3CN/diisopropyl ether. The precipitate was filtered off and dried to afford 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-(5-methoxy-6(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 7) as an HCl sait (1.5 g, 0.74 equiv. HCl, 0.29 equiv. Η3Ο). The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 30 mm, Mobile phase: 55% CO2, 45% iPrOH). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (671 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 7A (606 mg). The second eluted enantiomer (647 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 6B (580 mg).
Compound 7:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.7 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.17 - 3.30 (m, 2 H) 3.61 (s, 3’H) 3.79 - 3.87 (m, 5 H) 3.90 (s, 3 H) 3.93 - 4.02 (m, 1 H) 4.29 - 4.40 (m, 1 H) 5.59 (s, 1 H) 5.75 (s, 1 H) 5.87 (br d, J=10.7 Hz, 2 H) 7.02 (dd, J=8.2, 1.6 Hz, 1 H) 7.14 (d, J=1.3 Hz, 1 H) 7.24 (s, 1 H) 7.32 (d, J=8.5 Hz, 1 H) 8.32 (s, 1 H)
LC/MS (method LC-A): Rt 2.89 min, MH+ 623
Melting point: 160°C
-35Enantiomer 7A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (br t, J=6.8 Hz, 2 H) 2.34 (br t, J=7A Hz, 2 H) 3.18 - 3.28 (m, 2 H) 3.61 (s, 3 H) 3.79 - 3.87 (m, 5 H) 3.91 (s, 3 H) 3.94 - 4.05 (m, 1 H) 4.31 - 4.42 (m, 1 H) 5.59 (br d, J=8.2 Hz, 1 H) 5.76 (br s, 1 H) 5.87 (br d, J=WA Hz, 2 H) 6.40 (br d, J=8.5 Hz, 1 H) 7.02 (br d, J=7.9 Hz, 1 H) 7.14 (s, 1 H) 7.24 (s, 1 H) 7.33 (brd, J=8.2 Hz, 1 H) 8.33 (s, 1 H) 12.18 (br s, 1 H) LC/MS (method LC-A): Rt 2.87 min, MH+ 623
[a]D 20: -23.9° (c 0.28, DMF)
Chiral SFC (method SFC-C): Rt 1.76 min, MH+ 623, chiral purity 100%.
Enantiomer 7B:
1H NMR (500 MHz, DMSO-c/6) δ ppm 1.87 (quin, J=6.5 Hz, 2 H) 2.34 (br t, J=7A Hz, 2 H) 3.18 - 3.28 (m, 2 H) 3.61 (s, 3 H) 3.80 - 3.87 (m, 5 H) 3.91 (s, 3 H) 3.94 - 4.02 (m, 1 H) 4.28 - 4.41 (m, 1 H) 5.59 (br d, J=8.2 Hz, 1 H) 5.75 (br s, 1 H) 5.87 (br d, J=10.4 Hz, 2 H) 6.40 (br d, J=8.5 Hz, 1 H) 7.02 (br d, J=7.9 Hz, 1 H) 7.14 (s, 1 H) 7.24 (s, 1 H) 7.33 (brd, J=8.2 Hz, 1 H) 8.33 (s, 1 H) 12.17 (br s, 1 H) LC/MS (method LC-A): Rt 2.87 min, MH+ 623
[a]D 20:+28.5° (c 0.26, DMF)
Chiral SFC (method SFC-C): Rt 3.52 min, MH+ 623, chiral purity 100%.
Example 8: synthesis of 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 8) and chiral séparation into Enantiomers 8A and 8B.
Synthesis of intermediate 8a:
A mixture of 6-(trifluoromethoxy)indoline [CAS 959235-95-1] (2.5 g, 12.3 mmol), 2-(4-chloro-2-methoxyphenyl)acetic acid [CAS 170737-95-8] (2.47 g, 12.3 mmol),
-36HATU (7 g, 18.5 mmol) and diisopropylethylamine (6.1 mL, 36.9 mmol) in DMF (40-mL) was stirred at room température for 4 h. Water and EtOAc were added. The organic layer was separated, washed with water, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 85/15). The pure fractions were combined and the solvent was concentrated under reduced pressure to give, after crystallization from CH3CN/heptane, 2-(4-chloro-2methoxyphenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 8a (4.3 g).
Synthesis of intermediate 8b:
At -78°C, under a N2 flow, LiHMDS 1M in THF (19.7 mL, 19.7 mmol) was added dropwise to a mixture of 2-(4-chloro-2-methoxyphenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 8a (3.8 g, 9.8 mmol) in THF (50 mL). TMSCI (1.5 mL, 11.8 mmol) was added dropwise. The mixture was stirred for 15 min at -78°C and a solution of N-bromosuccinimide (1.9 g, 10.8 mmol) in THF (35 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chloro-2-methoxyphenyl)-1(6-(trifluoromethoxy)indolin-1-yl)ethanone 8b (4.5 g). The compound was used as such in the next step.
Synthesis of intermediate 8c:
A mixture of 2-bromo-2-(4-chloro-2-methoxyphenyl)-1-(6-(trifluoromethoxy)indolin1-yl)ethanone 8b (4.5 g, 9.68 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (2.7 g, 9.68 mmol) and diisopropylethylamine (2 mL, 11.6 mmol) in CH3CN (100 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc and washed with 1N HCl and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by flash chromatography on silica gel (15-40 pm, 120 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give, after crystallization from CH3CN, tert-butyl 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 8c (2.3 g).
Synthesis of Compound 8 and chiral séparation into Enantiomers 8A and 8B: A solution of tert-butyl 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 8c (2.3 g,
3.46 mmol) in 4M HCl in dioxane (30 mL) was stirred at 5°C for 3 h and at room température for 12 h. The precipitate was filtered off, washed with diisopropyl ether and dried to afford 4-(3-((1-(4-chloro-2-methoxyphenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 8) as an HCl sait (1.79 g, 0.86 equiv. HCl, 0.22 equiv. H2O). The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 30 mm, Mobile phase: 65% CO2, 35% iPrOH). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (726 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 8A (612 mg). The second eluted enantiomer (712 mg) was solidified from Petroleum ether/diisopropyl ether to give Enantiomer 8B (643 mg).
Compound 8:
1H NMR (500 MHz, DMSO-c/6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.34 (br t, J=7.3 Hz, 2 H) 3.08 - 3.26 (m, 2 H) 3.61 (s, 3 H) 3.83 (q, J=6.5 Hz, 2 H) 3.90 (s, 3 H) 3.98 - 4.09 (m, 1 H) 4.31 - 4.42 (m, 1 H) 5.60 (s, 1 H) 5.76 (s, 1 H) 5.87 (br d, J=9.5 Hz, 2 H) 6.98 - 7.05 (m, 2 H) 7.14 (d, J=1.9 Hz, 1 H) 7.31 (d, J=8.2 Hz, 1 H) 7.34 (d, J=8.2 Hz, 1 H) 8.02 (s, 1 H) LC/MS (method LC-A): Rt 3.04 min, MH+ 609 Melting point: 139°C
Enantiomer 8A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.33 (t, J=7.4 Hz, 2 H) 3.09 - 3.25 (m, 2 H) 3.61 (s, 3 H) 3.78 - 3.87 (m, 2 H) 3.90 (s, 3 H) 3.98 - 4.07 (m, 1 H) 4.32 - 4.42 (m, 1 H) 5.59 (d, J=8.5 Hz, 1 H) 5.76 (s, 1 H) 5.86 (s, 1 H) 5.88 (s, 1 H) 6.45 (d, J=8.8 Hz, 1 H) 6.97 - 7.06 (m, 2 H) 7.14 (d, J=1.3 Hz, 1 H) 7.31 (d, J=8.5 Hz, 1 H) 7.34 (d, J=8.2 Hz, 1 H) 8.02 (s, 1 H) 12.14 (br s, 1 H) LC/MS (method LC-A): Rt 3.03 min, MH+ 609 [a]D20: -39.3° (c 0.28, DMF)
Chiral SFC (method SFC-F): Rt 2.32 min, MH+ 609, chiral purity 100%.
Enantiomer 8B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.8 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.09 - 3.25 (m, 2 H) 3.61 (s, 3 H) 3.79 - 3.88 (m, 2 H) 3.90 (s, 3 H) 4.02 (td, J=10.2, 6.9 Hz, 1 H) 4.33 - 4.41 (m, 1 H) 5.60 (s, 1 H) 5.76 (s, 1 H) 5.86 (s, 1 H) 5.88 (s, 1 H) 6.45 (br s, 1 H) 6.99 - 7.05 (m, 2 H) 7.14 (d, J=1.6 Hz, 1 H) 7.31 (d, J=8.5 Hz, 1 H) 7.34 (d, J=8.2 Hz, 1 H) 8.02 (s, 1 H) 12.12 (br s, 1 H) LC/MS (method LC-A): Rt 3.03 min, MH+ 609
-38[a]D 20: +34.5° (c 0.29, DMF)
Chiral SFC (method SFC-F): Rt 3.51 min, MH+ 609, chiral purity 100%.
Example 9: synthesis of 4-(3-((1 -(4-chloro-2-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 9) and chiral séparation into Enantiomers 9A and 9B.
Synthesis of intermediate 9a:
A mixture of 2-(4-chloro-2-fluorophenyl)acetic acid [CAS 194240-75-0] (2.52 g, 13.4 mmol), 6-(trifluoromethyl)indoline [CAS 181513-29-1] (2.5 g, 13.4 mmol), hydroxybenzotriazole (2.7 g, 20.04 mmol), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (3.84 g, 20.04 mmol) and trimethylamine (3.71 mL, 26.7 mmol) in CH2CI2 (30 mL) was stirred at room température for 12 h. Water was added and the layers were separated. The organic layer was washed with water, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give, after crystallization from CH3CN/diisopropyl ether, 2-(4-chloro-2-fluorophenyl)-1(6-(trifluoromethyl)indolin-1-yl)ethanone 9a (3.9 g). The compound was used as such in the next step.
Synthesis of intermediate 9b:
At -78°C, under a N2flow, LiHMDS 1M in THF (13.98 mL, 13.98 mmol) was added dropwise to a mixture of 2-(4-chloro-2-fluorophenyl)-1-(6-(trifluoromethyl)indolin1-yl)ethanone 9a (2.5 g, 6.99 mmol) in THF (20 mL). The mixture was stirred for 15 min at -78°C and a solution of N-bromosuccinimide (1.37 g, 7.69 mmol) in THF (15 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with
-39EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chloro-2fluorophenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 9b (2.8 g). The compound was used as such in the next step.
Synthesis of intermediate 9c:
A mixture of 2-bromo-2-(4-chloro-2-fluorophenyl)-1-(6-(trifluoromethyl)indolin-1-yl)ethanone 9b (2.8 g, 6.41 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (1.8 g, 6.41 mmol) and diisopropylethylamine (1.33 mL, 7.7 mmol) in CH3CN (90 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc, and washed with 1N HCl, and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give, after crystallization from CH3CN/diisopropyl ether, tert-butyl 4-(3-((1 -(4-chloro-2-fluorophenyl)-2-oxo-2(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 9c (1.75 g).
Synthesis of Compound 9 and chiral séparation into Enantiomers 9A and 9B: A solution of terf-butyl 4-(3-((1-(4-chloro-2-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 9c (1.75 g, 2.75 mmol) in 4M HCl in dioxane (24.3 mL) was stirred at 5°C for 3 h and at room température for 8 h. The mixture was concentrated under reduced pressure. The residue was crystallized from CH3CN/diisopropyl ether to afford 4-(3-((1 -(4-chloro2-fluorophenyl)-2-oxo-2-(6-(trifluoromethyl)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 9) as an HCl sait (1.4 g, 0.8 equiv. HCl, 0.78 equiv. H2O). The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralpak® AD-H 5 pm 250 x 30 mm, Mobile phase: 70% CO2, 30% iPrOH). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (618 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 9A (505 mg). The second eluted enantiomer (548 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 9B (495 mg).
Compound 9:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.18 - 3.34 (m, 2 H) 3.63 (s, 3 H) 3.80 - 3.90 (m, 2 H) 4.02 - 4.14 (m, 1 H)
4.40 - 4.49 (m, 1 H) 5.72 (s, 1 H) 5.80 (s, 1 H) 5.94 (br d, 7=10.1 Hz, 2 H) 7.33 (dd, 7=8.5, 1.6 Hz, 1 H) 7.39 - 7.43 (m, 1 H) 7.43 - 7.50 (m, 3 H) 8.36 (s, 1 H) LC/MS (method LC-A): Rt 2.99 min, MH+ 581
Melting point: 110°C
Enantiomer 9A:
1H NMR (500 MHz, DMSO-76) δ ppm 1.87 (quin, 7=6.7 Hz, 2 H) 2.33 (br t, 7=7.1 Hz, 2 H) 3.22 - 3.28 (m, 2 H) 3.62 (s, 3 H) 3.80 - 3.90 (m, 2 H) 4.03 - 4.13 (m, 1 H) 4.39 - 4.48 (m, 1 H) 5.72 (br d, 7=8.8 Hz, 1 H) 5.80 (s, 1 H) 5.93 (br d, 7=10.7 Hz, 2 H) 6.60 (br d, 7=8.8 Hz, 1 H) 7.33 (br d, 7=7.9 Hz, 1 H) 7.39 - 7.43 (m, 1 H) 7.43-7.51 (m, 3 H) 8.36 (s, 1 H) 12.19 (br s, 1 H)
LC/MS (method LC-A): Rt 2.98 min, MH+ 581
[a]D 20: -30.0° (c 0.29, DMF)
Chiral SFC (method SFC-G): Rt 1.97 min, MH+ 581, chiral purity 100%.
Enantiomer 9B:
1H NMR (500 MHz, DMSO-76) δ ppm 1.87 (quin, 7=6.9 Hz, 2 H) 2.33 (t, 7=7.3 Hz, 2 H) 3.21 - 3.28 (m, 2 H) 3.63 (s, 3 H) 3.80 - 3.91 (m, 2 H) 4.02 - 4.12 (m, 1 H) 4.40 - 4.49 (m, 1 H) 5.72 (d, 7=9.1 Hz, 1 H) 5.80 (s, 1 H) 5.94 (br d, 7=11.0 Hz, 2 H) 6.60 (br d, 7=8.8 Hz, 1 H) 7.33 (dd, 7=8.2, 1.6 Hz, 1 H) 7.38 - 7.43 (m, 1 H) 7.43 7.50 (m, 3 H) 8.36 (s, 1 H) 11.04 -12.93 (m, 1 H)
LC/MS (method LC-A): Rt 2.98 min, MH+ 581
[a]D 20:+27.9° (c 0.28, DMF)
Chiral SFC (method SFC-G): Rt 3.19 min, MH+ 581, chiral purity 99.35%.
Example 10: synthesis of 4-(3-((1 -(4-chloro-2-fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1 -yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 10) and chiral séparation into Enantiomers 10Aand 10B.
Synthesis of intermediate 10a:
HATU (7.02 g, 18.46 mmol) was added to a mixture of 6-(trifluoromethoxy)indoline [CAS 959235-95-1] (2.5 g, 12.3 mmol), 2-(4-chloro-2-fluorophenyl)acetic acid [CAS 194240-75-0] (2.32 g, 12.3 mmol) and diisopropylethylamine (6.1 mL, 36.9 mmol) in DMF (100 mL). The resulting mixture was stirred at room température for 12 h. The mixture was diluted with water, the precipitate was filtered off, and washed with water. The residue was taken up with EtOAc and the organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue product was crystallized from diisopropyl ether to give 2-(4-chloro-2fluorophenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 10a (4 g).
Synthesis of intermediate 10b:
At -78°C, under a N2 flow, LiHMDS 1M in THF (21.4 mL, 21.4 mmol) was added dropwise to a mixture of 2-(4-chloro-2-fluorophenyl)-1-(6-(trifluoromethoxy)indolin1-yl)ethanone 10a (4 g, 10.7 mmol) in THF (60 mL). The mixture was stirred for 15 min at -78°C and a solution of A/-bromosuccinimide (2.1 g, 11.8 mmol) in THF (40 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chloro-2fluorophenyl)-1-(6-(trifluoromethoxy)indolin-1-yl)ethanone 10b (4.8 g). The compound was used as such in the next step.
-42Synthesis of intermediate 10c:
A mixture of 2-bromo-2-(4-chloro-2-fluorophenyl)-1-(6-(trifluoromethoxy)indolin1-yl)ethanone 10b (3 g, 6.63 mmol), fert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (1.86 g, 6.63 mmol) and diisopropylethylamine (1.37 mL, 7.95 mmol) in CH3CN (60 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc, and washed with 1N HCl 1N and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by flash chromatography on silica gel (15-40 pm, 120 g, heptane/EtOAc 80/20). The pure fractions were combined and evaporated to dryness to give fert-butyl 4-(3-((1(4-chloro-2-fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5methoxyphenoxy)butanoate 10c (835 mg).
Synthesis of Compound 10 and chiral séparation into Enantiomers 10A and 10B:
A solution of fert-butyl 4-(3-((1 -(4-chloro-2-fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoate 10c (835 mg, 1.28 mmol) in 4M HCl in dioxane (11.3 mL) was stirred at 5°C for 3 h and at room température for 8 h. The solution was concentrated under reduced pressure. The residue was solidified from diisopropyl ether to afford 4-(3-((1 -(4-chloro-2fluorophenyl)-2-oxo-2-(6-(trifluoromethoxy)indolin-1-yl)ethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 10) (620 mg). The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralpak® IC 5 pm 250 x 30 mm, Mobile phase: 70% CO2, 30% IPrOH (+ 0.3% iPrNH2). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (249 mg) was taken up with EtOAc and washed with 1N HCl. The organic layer was separated, dried over MgSO4, filtered and concentrated under reduced pressure. The residue was solidified from petroleum ether/diisopropyl ether to give Enantiomer 10A (183 mg). The second eluted enantiomer (274 mg) was taken up with EtOAc and washed with 1N HCl. The organic layer was separated, dried over MgSO4, filtered and concentrated under reduced pressure. The residue was solidified from petroleum ether/diisopropyl ether to give Enantiomer 10B (186 mg).
Compound 10:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.8 Hz, 2 H) 2.33 (br t, J=7.3 Hz, 2 H) 3.09 - 3.24 (m, 2 H) 3.62 (s, 3 H) 3.81 - 3.89 (m, 2 H) 4.05 - 4.13 (m, 1 H) 4.38 - 4.47 (m, 1 H) 5.70 (br d, J=9.1 Hz, 1 H) 5.79 (s, 1 H) 5.93 (br d,
-43J=9.8 Hz, 2 H) 6.62 (br d, J=8.8 Hz, 1 H) 7.03 (br d, J=8.2 Hz, 1 H) 7.31- 7.37 (m, 2 H) 7.41 - 7.50 (m, 2 H) 8.02 (s, 1 H) 12.15 (br s, 1 H)
LC/MS (method LC-A): Rt 3.07 min, MH+ 597
Enantiomer 10A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, J=6.9 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.12 - 3.22 (m, 2 H) 3.62 (s, 3 H) 3.79 - 3.90 (m, 2 H) 4.04 - 4.13 (m, 1 H) 4.38 - 4.48 (m, 1 H) 5.70 (d, J=8.8 Hz, 1 H) 5.79 (s, 1 H) 5.93 (br d, J=9.8 Hz, 2 H) 6.62 (d, J=8.8 Hz, 1 H) 7.03 (br d, J=9.5 Hz, 1 H) 7.30 - 7.38 (m, 2 H) 7.41 - 7.51 (m, 2 H) 8.02 (s, 1 H) 12.10 (br s, 1 H)
LC/MS (method LC-A): Rt 3.04 min, MH+ 597
[a]D20: +23.1° (c 0.26, DMF)
Chiral SFC (method SFC-H): Rt 3.22 min, MH+ 597, chiral purity 100%.
Enantiomer 10B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (br t, J=6.8 Hz, 2 H) 2.34 (br t, J=7.3 Hz, 2 H) 3.12 - 3.25 (m, 2 H) 3.63 (s, 3 H) 3.80- 3.90 (m, 2 H) 4.05 - 4.14 (m, 1 H) 4.38 - 4.49 (m, 1 H) 5.71 (br d, J=9.1 Hz, 1 H) 5.80 (br s, 1 H) 5.94 (br d, J=9.5 Hz, 2 H) 6.62 (br d, J=8.8 Hz, 1 H) 7.03 (br d, J=7.9 Hz, 1 H) 7.30- 7.38 (m, 2 H) 7.41 -7.52 (m, 2 H) 8.02 (brs, 1 H) 12.12 (br s, 1 H)
LC/MS (method LC-A): Rt 3.04 min, MH+ 597
[a]D 20: -23.0° (c 0.3, DMF)
Chiral SFC (method SFC-H): Rt4.05 min, MH+ 597, chiral purity 100%.
Example 11: synthesis of 4-(3-((1 -(4-chloro-2-fluorophenyl)-2-(5-methoxy-6(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 11) and chiral séparation into Enantiomers 11A and 11 B.
Synthesis of intermediate 11a:
HATU (5.25 g, 13.81 mmol) was added to a mixture of 5-methoxy-6-(trifluoromethyl)indoline 5c (2 g, 9.21 mmol), 2-(4-chloro-2-fluorophenyl)acetic acid [CAS 194240-75-0] (1.74 g, 9.21 mmol) and diisopropylethylamine (4.57 mL, 27.6 mmol) in DMF (50 mL). The resulting mixture was stirred at room température for 12 h. The mixture was diluted with ice/water. The precipitate was filtered off 10 and washed with water. The residue was taken up with CH2CI2 and the organic solution was washed with a 10% aqueous solution of K2CO3, brine, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was crystallized from diisopropyl ether to give 2-(4-chloro-2-fluorophenyl)1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 11a (3.4 g).
Synthesis of intermediate 11b:
At -78°C, under a N2 flow, LiHMDS 1M in THF (17.5 mL, 17.5 mmol) was added dropwise to a mixture of 2-(4-chloro-2-fluorophenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 11a (3.4 g, 8.77 mmol) in THF (45 mL). TMSCI 20 (1.34 mL, 10.5 mmol) was added dropwise. The mixture was stirred for 15 min at -78°C and a solution of N-bromoscuccinimide (1.87 g, 10.52 mmol) in THF (30 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CL The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the 25 solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chloro-2fluorophenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 11b (4 g). The compound was used as such in the next step.
-45Synthesis of intermediate 11c:
A mixture of 2-bromo-2-(4-chloro-2-fluorophenyl)-1-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)ethanone 11b (4 g, 8.57 mmol), tert-butyl 4-(3-amino-5-methoxyphenoxy)butanoate 1a (2.4 g, 8.57 mmol) and diisopropylethylamine (1.77 mL, 10.3 mmol) in CH3CN (100 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc and washed with 1N HCl and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The compound was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The compound was further purified via achiral SFC (stationary phase: 2-ethylpyridine 5 pm 150 x 30 mm, mobile phase: 85% CO2, 15% MeOH). The pure fractions were combined and evaporated to dryness to give tert-butyl 4-(3-((1 -(4-chloro-2fluorophenyl)-2-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5methoxyphenoxy)butanoate 11c (2.6 g).
Synthesis of Compound 11 and chiral séparation into Enantiomers 11A and 11B:
A solution of tert-butyl 4-(3-((1-(4-chloro-2-fluorophenyl)-2-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 11c (2.2 g, 3.3 mmol) in 4M HCl in dioxane (29.2 mL) was stirred at 5°C for 3 h and at room température for 8 h. The solution was concentrated under reduced pressure. The residue was crystallized from CH3CN/diisopropyl ether to afford 4-(3-((1 -(4-chloro2-fluorophenyl)-2-(5-methoxy-6-(trifluoromethyl)indolin-1-yl)-2-oxoethyl)amino)-5methoxyphenoxy)butanoic acid (Compound 11) as an HCl sait (800 mg, 0.85 equiv. HCl, 0.36 equiv. H2O). This fraction was combined with another batch (total amount: 1.8 g) for chiral séparation. The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralcel® OD-H 5 pm 250 x 30 mm, Mobile phase: 55% CO2, 45% iPrOH). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (788 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 11A (693 mg). The second eluted enantiomer (771 mg) was solidified from petroleum ether/diisopropyl ether to give Enantiomer 11B (695 mg).
Compound 11:
1H NMR (500 MHz, DMSO-c/6) δ ppm 1.87 (quin, 7=6.8 Hz, 2 H) 2.34 (br t, 7=7.4
Hz, 2 H) 3.18 - 3.31 (m, 2 H) 3.63 (s, 3 H) 3.85 (s, 5 H) 3.98 - 4.09 (m, 1 H) 4.37 4.48 (m, 1 H) 5.69 (s, 1 H) 5.79 (s, 1 H) 5.93 (br d, 7=11.0 Hz, 2 H) 7.26 (s, 1 H)
7.32 (br d, 7=8.5 Hz, 1 H) 7.44 - 7.52 (m, 2 H) 8.32 (s, 1 H)
-46LC/MS (method LC-A): Rt 2.90 min, MH+ 611
Melting point: 121 °C
Enantiomer 11 A:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.88 (quin, J=6.8 Hz, 2 H) 2.34 (t, J=7.3 Hz, 2 H) 3.18 - 3.29 (m, 2 H) 3.63 (s, 3 H) 3.86 (s, 5 H) 3.99 - 4.07 (m, 1 H) 4.38 - 4.47 (m, 1 H) 5.69 (br s, 1 H) 5.79 (s, 1 H) 5.93 (br d, J=10.7 Hz, 2 H) 6.55 (br s, 1 H) 7.25 (s, 1 H) 7.32 (dd, J=8.5, 1.3 Hz, 1 H) 7.43 - 7.51 (m, 2 H) 8.33 (s, 1 H) 12.13 (brs, 1 H)
LC/MS (method LC-A): Rt 2.90 min, MH+ 611
[a]D 20: -23.9° (c 0.26, DMF)
Chiral SFC (method SFC-C): Rt 1.70 min, MH+ 611, chiral purity 100%.
Enantiomer 11 B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.88 (quin, J=6.8 Hz, 2 H) 2.34 (br t, J=7.3 Hz, 2 H) 3.18 - 3.31 (m, 2 H) 3.63 (s, 3 H) 3.85 (s, 5 H) 3.99 - 4.07 (m, 1 H) 4.37 - 4.47 (m, 1 H) 5.69 (br s, 1 H) 5.79 (s, 1 H) 5.93 (br d, J=11.0 Hz, 2 H) 6.56 (br s, 1 H) 7.25 (s, 1 H) 7.32 (br d, J=8.2 Hz, 1 H) 7.43 - 7.50 (m, 2 H) 8.33 (s, 1 H) 12.13 (brs, 1 H)
LC/MS (method LC-A): Rt 2.89 min, MH+ 611
[a]D 20: +24.0° (c 0.25, DMF)
Chiral SFC (method SFC-C): Rt2.96 min, MH+ 611, chiral purity 100%.
Example 12: synthesis of 4-(3-((1-(4-chlorophenyl)-2-(5-methoxy-6-(trifluoromethoxy)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid (Compound 12) and chiral séparation into Enantiomers 12Aand 12B.
Μθβδί-=
toluene
NBS
IBuOK
BHs-Pyridine
EtOH, 0°C 3I
Cul, PdCI2(PPh3)2
Et3N, DMF
70°C, ovemlght
5°C,2h 12a
OMe
(iPr)2NEt
CH3CN, 70°C, 4h
Synthesis of intermediate 12a:
A solution of 4-methoxy-3-(trifluoromethoxy)aniline [CAS 647855-21-8] (3.1 g, 15.0 mmol) in toluene (50 mL) was treated with N-bromosuccinimide (2.8 g, 15.7 mmol) at 5°C and the resulting mixture was stirred at 5-10°C for 2 h. The mixture was quenched with water and extracted with EtOAc. The combined extracts were dried over MgSO4, filtered and evaporated under reduced pressure, îo Purification was done by flash chromatography on silica gel (15-40 pm, 24 g, heptane/EtOAc gradient 95/5 to 90/10) The pure fractions were combined and evaporated to dryness to give 2-bromo-4-methoxy-5-(trifluoromethoxy)aniline 12a (2.5 g).
Synthesis of intermediate 12b:
A solution of 2-bromo-4-methoxy-5-(trifluoromethoxy)aniline 12a (2.72 g, 9.51 mmol) in DMF (30 mL) was degassed with N2 for 15 min. Dichlorobis(triphenylphosphine)palladium (667 mg, 0.95 mmol), copper(l) iodide (362 mg, 1.90 mmol), triethylamine (3.96 mL, 28.5 mmol) and trimethylsilylacetylene 20 (3.95 mL, 28.53 mmol) were added. The reaction mixture was heated at 70°C for h under N2 flow. After cooling to room température, the reaction mixture was diluted with H2O and extracted with EtOAc. The organic phases were combined, dried over MgSO4, filtered and concentrated under reduced pressure. The residue
-48was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 85/15). The pure fractions were combined and evaporated to dryness to give 4-methoxy-5-(trifluoromethoxy)-2-((trimethylsilyl)ethynyl)aniline 12b (1.4 g).
Synthesis of intermediate 12c:
To a solution of 4-methoxy-5-(trifluoromethoxy)-2-((trimethylsilyl)ethynyl)aniline 12b (1.2 g, 3.96 mmol) in NMP (11 mL) under N2 flow was added tBuOK (1.33 g, 11.9 mmol) in one portion. The reaction mixture was heated at 80°C for 4 h; after cooling to room température, the mixture was poured into ice/water and acidified with 3N HCl until pH 4-5. The reaction mixture was extracted with EtOAc. The organic phases were combined, washed with H2O, dried over MgSO4, filtered and concentrated under reduced pressure. The residue was purified by flash chromatography on silica gel (15-40 pm, 40 g, heptane/EtOAc 85/15). The pure fractions were combined and evaporated to dryness to give 5-methoxy-6(trifluoromethoxy)-1/-/-indole 12c (490 mg).
Synthesis of intermediate 12d:
At 0°C, BH3-Pyridine (10.5 mL, 103.8 mmol) was added dropwise to a solution of 5-methoxy-6-(trifluoromethoxy)-1H-indole 12c (8 g, 34.6 mmol) in EtOH (45 mL). 6N HCl (6 mL) was slowly added while maintaining the température below 10°C. The mixture was stirred at 0°C for 3 h. Water (210 mL) was added and the mixture was basified until pH 8-9 with a concentrated solution of NaOH in water (during the addition, the reaction température was kept below 20°C). The mixture was extracted with EtOAc. The organic layer was washed with water, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. Toluene was added and the solution was concentrated under reduced pressure to give 7.5 g of 5-methoxy-6-(trifluoromethoxy)indoline 12d.
Synthesis of intermediate 12e:
A mixture of 5-methoxy-6-(trifluoromethoxy)indoline 12d (1 g, 4.29 mmol), 2-(4-chlorophenyl)acetic acid [CAS 1878-66-6] (805 mg, 4.72 mmol), HATU (2.44 g, 6.43 mmol) and diisopropylethylamine (2.13 mL, 12.87 mmol) in DMF (20 mL) was stirred at room température for 12 h. Ice/water was added and the precipitate was filtered off. The residue was taken up with CH2CI2. The organic solution was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-(4-chlorophenyl)-1-(5-methoxy-6(trifluoromethoxy)indolin-1-yl)ethanone 12e (1.68 g).
-49Synthesis of intermediate 12f:
At -78°C, under a N2 flow, LiHMDS 1M in THF (8.3 mL, 8.3 mmol) was added dropwise to a mixture of 2-(4-chlorophenyl)-1-(5-methoxy-6-(trifluoromethoxy)indolin-1-yl)ethanone 12e (1.6 g, 4.15 mmol) in THF (25 mL). TMSCI (0.63 mL, 4.98 mmol) was added dropwise. The mixture was stirred for 15 min at -78°C and a solution of /V-bromosuccinimide (0.89 g, 4.98 mmol) in THF (15 mL) was added dropwise. After stirring for 2 h at -78°C, the reaction was quenched with a saturated solution of NH4CI. The mixture was extracted with EtOAc. The organic layer was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure to give 2-bromo-2-(4-chlorophenyl)-1-(5-methoxy-6(trifluoromethoxy)indolin-1-yl)ethanone 12f (2.3 g, purity ( by LC): 50%). The compound was used as such in the next step.
Synthesis of intermediate 12g:
A mixture of 2-bromo-2-(4-chlorophenyl)-1-(5-methoxy-6-(trifluoromethoxy)indolin1-yl)ethanone 12f (2.3 g, 2.48 mmol, purity (by LC): 50%), tert-butyl 4-(3-amino-5methoxyphenoxy)butanoate 1a (0.696 g, 2.48 mmol) and diisopropylethylamine (0.512 mL, 2.97 mmol) in CH3CN (25 mL) was stirred at 70°C for 4 h. The mixture was concentrated under reduced pressure, diluted with EtOAc, and washed with 1N HCl, and water. The organic phase was separated, dried over MgSO4, filtered and the solvent was evaporated under reduced pressure. The residue was purified by flash chromatography on silica gel (15-40 pm, 80 g, heptane/EtOAc 80/20). The fractions containing product were combined and evaporated under reduced pressure and the residue was purified again by flash chromatography on silica gel (15-40 pm, 40 g, CH2CI2). The pure fractions were combined and evaporated to dryness to give tert-butyl 4-(3-((1-(4-chlorophenyl)-2-(5-methoxy-6-(trifluoromethoxy)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 12g (920 mg).
Synthesis of Compound 12 and chiral séparation into Enantiomers 12A and 12B:
A solution of tert-butyl 4-(3-((1-(4-chlorophenyl)-2-(5-methoxy-6-(trifluoromethoxy)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoate 12g (920 mg, 1.38 mmol) in 4M HCl in dioxane (15 mL) was stirred at 5°C for 3 h and at room température for 12 h. The precipitate was filtered off, washed with diisopropyl ether and dried to afford 4-(3-((1 -(4-chlorophenyl)-2-(5-methoxy-6-(trifluoromethoxy)indolin-1-yl)-2-oxoethyl)amino)-5-methoxyphenoxy)butanoic acid
-50(Compound 12, 802 mg, 0.2 equiv. H2O). The enantiomers were separated via Préparative Chiral SFC (Stationary phase: Chiralpak® AD-H 5 pm 250 x 20 mm, Mobile phase: 50% CO2, 50% iPrOH). The product fractions were combined and evaporated under reduced pressure. The first eluted enantiomer (260 mg) was solidified from heptane/diisopropyl ether to give Enantiomer 12A (165 mg). The second eluted enantiomer (241 mg) was solidified from heptane/diisopropyl ether to give Enantiomer 12B (184 mg).
Compound 12:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.86 (quin, J=6.9 Hz, 2 H) 2.33 (t, J=7.3 Hz, 2 H) 3.08 - 3.28 (m, 2 H) 3.61 (s, 3 H) 3.81 (s, 3 H) 3.84 (br t, J=6.5 Hz, 2 H) 3.97 4.06 (m, 1 H) 4.48 (td, J=10.4, 6.3 Hz, 1 H) 5.53 (s, 1 H) 5.75 (s, 1 H) 5.94 (br d, J=10.1 Hz, 2 H) 7.20 (s, 1 H) 7.43 (d, J=8.5 Hz, 2 H) 7.54 (d, J=8.5 Hz, 2 H) 8.06 (s, 1 H)
LC/MS (method LC-A): Rt 2.89 min, MH+ 609
Enantiomer 12A:
1H NMR (500 MHz, DMSO-J6) δ ppm 1.86 (quin, J=6.8 Hz, 2 H) 2.33 (t, J=7.3 Hz, 2 H) 3.09 - 3.26 (m, 2 H) 3.61 (s, 3 H) 3.81 (s, 3 H) 3.84 (br t, J=6.5 Hz, 2 H) 4.02 (td, J=10.3, 7.1 Hz, 1 H) 4.48 (td, J=10.4, 6.3 Hz, 1 H) 5.53 (d, J=8.5 Hz, 1 H) 5.75 (s, 1 H) 5.93 (s, 1 H) 5.95 (s, 1 H) 6.43 (d, J=8.8 Hz, 1 H) 7.20 (s, 1 H) 7.43 (d, J=8.2 Hz, 2 H) 7.55 (d, J=8.5 Hz, 2 H) 8.06 (s, 1 H) 12.12 (br s, 1 H) LC/MS (method LC-A): Rt 2.92 min, MH+ 609 [a]D20: -44.2° (c 0.197, DMF)
Chiral SFC (method SFC-I): Rt 0.99 min, MH+ 609, chiral purity 100%.
Enantiomer 12B:
1H NMR (500 MHz, DMSO-d6) δ ppm 1.86 (quin, J=6.9 Hz, 2 H) 2.33 (t, J=7.3 Hz, 2 H) 3.09 - 3.27 (m, 2 H) 3.61 (s, 3 H) 3.81 (s, 3 H) 3.84 (brt, J=6.5 Hz, 2 H) 3.98 4.06 (m, 1 H) 4.48 (td, J=10.5, 6.1 Hz, 1 H) 5.53 (d, J=8.8 Hz, 1 H) 5.75 (s, 1 H) 5.93 (s, 1 H) 5.95 (s, 1 H) 6.43 (d, J=8.8 Hz, 1 H) 7.20 (s, 1 H) 7.43 (d, J=8.5 Hz, 2 H) 7.54 (d, J=8.5 Hz, 2 H) 8.06 (s, 1 H) 12.16 (br s, 1 H) LC/MS (method LC-A): Rt 2.91 min, MH+ 609 [a]D20:+40.7° (c 0.189, DMF)
Chiral SFC (method SFC-I): Rt 1.45 min, MH+ 609, chiral purity 98.53%.
-51Table : compounds prepared as described above
Compound | Structure | Optical rotation |
1 | F fS ?Me CK JL JL JL^zk. .OH n cr Fy A H ° /Y b | racemic |
1A | I O Γ Φ J / Ύγ | [a]D 20 = -49.0° |
1B | Χη ?Me F H O | [a]D 20 = +49.5° |
2 | F O Me CK JL JJk JL ^K. N O Y H ° F 'F | racemic |
2A | F iTi ?Me CkJV XX ^k/\z-OH N O Y H ° ρ/Ύ _____________F F ____________________________________________ | [a]D 20 = -46.3° |
2B | Χ^Ί ÇMe aX<)jCjx ζχ/^,οη N 0 Y —X H ° _____________F F__ | [a]D 20 =+47.0° |
Compound | Structure | Optical rotation |
3 | Cl OMe H o | racemic |
3A | Cl il ?Me CAxI^χχ^χγ^ΟΗ γ·^ N O v Y h O | [a]D 20 = -42.4° |
3B | ΧΧ-^Ί 0 \$O Zvo \_/ Z )—' ® J 0 I | [a]D 20 = +50.7° |
4 | Cl ifi ?Me ex 1 X. N cr Y __N H o | racemic |
4A | Cl zs îMe cXX xXX,X^X/XX0H γχ N ax γ -v- -γ- H 0 | [a]D 20 = -48.5° |
4B | C! Γί ?Μθ o2æ’XX V XN 0 Y ,Ν H O ^<°^P _____________F F __ | [a]D 20 = +42.9° |
5 | Cl Χη OMe ca A X- A_x^x^.oh n cr y F\ xK H ° MeC>___ | racemic |
Compound | Structure | Optical rotation |
5A | Ξ \ZJn Φ [ οχ/ ο L ζ—\ /=\ \_/2 /-- φ ο X | [a]D 20 = -43.2° |
5B | 2 Τ\£^1 φ Γ Ο. / L ζ \ \_zi y—' φ ο | [a]D 20 = +41.4° |
6 | CI OMe MeCjN^ rXl CX JL /X. JL_ ^.ΟΗ Η ° | racemic |
6A | τ 0 Γ φ ___( ο—/^2 ό^ΖΛ^/21 ^=/ 1 ο ο y-χ 1 ο | [a]D 20 = -28.6° |
6B | ΗχΖ-^ΤΙ Ο « τΑ °\ L ζ—\ /=\ \_/2 /-- φ J ο X | [a]D 20 =+32.1° |
7 | g \L=n Φ [ Ο\/ ο » τΑ P X \_/2 )-7 φ j ο X | racemic |
Compound | Structure | Optical rotation |
7A | Cl /S îMe MeOiw ΓΊ Ox A A. A n o y /'Λ H ° a^p Meoz | [a]D 20 = -23.9° |
7B | I 0 Γ 0> _/ θ^/ \=/ | /Ό 1 Φ | [a]D 20 = +28.5° |
8 | Cl r^S 9Μθ Γ^Ί] CK A, PkJA n o y H O | racemic |
8A | _ C! lij ?Me MeO^r^ oUt’ AA^k^k^oh __.N H O _____________F F ____________________________________________ | [a]D 20 = -39.3° |
8B | C! ifl ?Me ckJc AAL „^xz\z° h H ° A0-^_________ | [a]D 20 = +34.5° |
9 | Cl rp5^ OMe °Ακ^^ί<^γΟΗ fA /==<% H ° | racemic |
Compound | Structure | Optical rotation |
9A | Cl lii n σ y K -N H O | [a]D 20 = -30.0° |
9B | Cl Il i ΐ^θ N σ y ξ ,Ν H Ο | [a]D 20 = +27.9° |
10 | Cl ?Μθ CK JL JL^^-^^xX^^OH Xf n σ ητ .N H O F p | racemic |
10A | Cl î^e J^jL ZK/K/OH χ^ n o x _^N X H 0 F F | [a]D 20 = +23.Γ |
10B | C! lil ?Me J^Xx^xX^\^0H ^N H 0 _ | [a]D 20 =-23.0° |
11 | Cl i|% OMe F^y I**!] CK JL JL JL fi H ° MeOZ____ | racemic |
Compound | Structure | Optical rotation |
11A | S φ f O [ z—f /=\ \_/s /— ® J O T | [a]D 20 = -23.9° |
11B | CI ίίι ?M® N σ τ \ H ° ΜθΟΖ | [a]D 20 = +24.0° |
12 | ci ΡΜθ CK 1 n σ y Λ ,Αχ H ° f MeOZ | racemic |
12A | Cl il ?M® N O Y F MeOZ | [a]D 20 = -44.2° |
12B | Cl ΙιΊ ?Me N σ y F MeO | [a]o20 =+40.7° |
ANTIVIRAL ACTIVITY OF THE COMPOUNDS OF THE INVENTION
DENV-2 antiviral assay
The antiviral activity of ail the compounds of the invention was tested against the DENV-2 16681 strain which was labeled with enhanced green fluorescent protein (eGPF). The culture medium consists of minimal essential medium supplemented with 2% of heat-inactivated fêtai calf sérum, 0.04% gentamycin (50 mg/mL) and 2mM of L-glutamine. Vero cells, obtained from ECACC, were suspended in culture medium and 25pL was added to 384-well plates (2500 cells/well), which already
-57contain the antiviral compounds. Typically, these plates contain a 5-fold serial dilution of 9 dilution steps of the test compound at 200 times the final concentration in 100% DMSO (200nL). In addition, each compound concentration is tested in quadruplicate (final concentration range: 25 μΜ - 0.000064 pM or 2.5 pM - 0.0000064 pM for the most active compounds). Finally, each plate contains wells which are assigned as virus Controls (containing cells and virus in the absence of compound), cell Controls (containing cells in the absence of virus and compound) and medium Controls (containing medium in the absence of cells, virus and compounds). To the wells assigned as medium control, 25 pL of culture medium was added instead of Vero cells. Once the cells were added to the plates, the plates were incubated for 30 minutes at room température to allow the cells to distribute evenly within the wells. Next, the plates were incubated in a fully humidified incubator (37°C, 5% CO2) until the next day. Then, DENV-2 strain 16681, labeled with eGFP, was added at a multiplicity of infection (MOI) of 0.5. Therefore, 15 pL of virus suspension was added to ail the wells containing test compound and to the wells assigned as virus control. In parallel, 15 pL of culture medium was added to the medium and cell Controls. Next, the plates were incubated for 3 days in a fully humidified incubator (37°C, 5% CO2). At the day of the read out, the eGFP fluorescence was measured using an automated fluorescence microscope at 488 nm (blue laser). Using an in-house LIMS system, inhibition dose response curves for each compound were calculated and the half maximal effective concentration (EC5o) was determined. Therefore, the percent inhibition (I) for every test concentration is calculated using the following formula: I = 100*(St-Scc)/(Svc-Scc); St, Sec and Svc are the amount of eGFP signal in the test compound, cell control and virus control wells, respectively. The EC5o represents the concentration of a compound at which the virus réplication is inhibited with 50%, as measured by a 50% réduction of the eGFP fluorescent intensity compared to the virus control. The EC50 is calculated using linear interpolation (Table 1).
In parallel, the toxicity of the compounds was assessed on the same plates. Once the read-out for the eGFP signal was done, 40pL of ATPIite, a cell viability stain, was added to ail wells of the 384-well plates. ATP is présent in ail metabolically active cells and the concentration déclinés very rapidly when the cells undergo necrosis or apoptosis. The ATPLite assay system is based on the production of light caused by the reaction of ATP with added luciferase and D-luciferin. The plates were incubated for 10 minutes at room température. Next, the plates were measured on a ViewLux. The half maximal cytotoxic concentration (CC50) was
-58also determined, defined as the concentration required to reduce the luminescent signal by 50% compared to that of the cell control wells. Finally, the selectivity index (SI) was determined for the compounds, which was calculated as followed: SI = CC50/EC50.
Table 1: EC50, CC50, and SI for the compounds of the invention in the DENV-2 antiviral assay
compound# | EC50 (μΜ) | N | CC50 (μΜ) | N | SI | N |
1 | 0.0021 | 4 | >25 | 4 | >12022 | 4 |
1A | 0.18 | 3 | >25 | 3 | >76 | 3 |
1B | 0.00084 | 3 | 20 | 3 | 26500 | 3 |
2 | 0.00055 | 3 | 12 | 4 | 22200 | 3 |
2A | 0.056 | 3 | 14 | 3 | 248 | 3 |
2B | 0.00024 | 3 | 20 | 3 | 214720 | 3 |
3 | 0.00048 | 3 | 13 | 5 | 20300 | 3 |
3A | 0.0039 | 6 | 11 | 7 | 3200 | 6 |
3B | 0.00014 | 8 | 13 | 8 | 111100 | 8 |
4 | 0.00015 | 4 | 10 | 4 | >46100 | 4 |
4A | 0.031 | 7 | 10 | 8 | 345 | 7 |
4B | 0.00012 | 23 | 13 | 23 | 92400 | 23 |
5 | 0.00062 | 3 | 13 | 3 | 26000 | 3 |
5A | 0.019 | 3 | 12 | 3 | 625 | 3 |
5B | 0.00018 | 3 | 13 | 3 | 87500 | 3 |
6 | 0.00031 | 6 | 12 | 7 | 32100 | 6 |
6A | 0.023 | 3 | 12 | 3 | 527 | 3 |
6B | 0.00013 | 5 | 13 | 5 | >209126 | 5 |
7 | 0.00047 | 3 | 12 | 3 | 24500 | 3 |
7A | 0.024 | 3 | 12 | 3 | 508 | 3 |
7B | 0.00017 | 3 | 13 | 3 | 101083 | 3 |
8 | 0.00013 | 3 | 12 | 3 | 112292 | 3 |
8A | 0.28 | 4 | 12 | 4 | 43 | 4 |
8B | 0.000066 | 6 | 14 | 7 | >62700 | 6 |
9 | 0.00096 | 3 | 11 | 3 | 12700 | 3 |
9A | 0.031 | 3 | 12 | 3 | 392 | 3 |
9B | 0.00040 | 3 | 13 | 3 | 28400 | 3 |
10 | 0.00024 | 3 | 10 | 3 | 44300 | 3 |
compound# | EC50 | CC50 | SI | N | ||
(μΜ) | N | (μΜ) | N | |||
10A | 0.00019 | 3 | 13 | 3 | 79200 | 3 |
10B | 0.0055 | 3 | 8.8 | 3 | 1620 | 3 |
11 | 0.00066 | 3 | 11 | 3 | 20600 | 3 |
11A | 0.015 | 3 | 12 | 3 | 837 | 3 |
11B | 0.00015 | 3 | 12 | 3 | 124345 | 3 |
12 | 0.00073 | 4 | 12 | 4 | 17700 | 4 |
12A | 0.38 | 3 | 12 | 3 | 32 | 3 |
12B | 0.00035 | 3 | 12 | 3 | 34900 | 3 |
N= the number of independent experiments in which the compounds were tested.
Tetravalent reverse transcriptase quantitative-PCR (RT-qPCR) assay
The antiviral activity of the compounds of the invention was tested against DENV-1 strain TC974#666 (NCPV), DENV-2 strain 16681, DENV-3 strain H87 (NCPV) and DENV-4 strain H241 (NCPV) in a RT-qPCR assay. Therefore, Vero cells were infected with either DENV-1, or -2, or -3, or -4 in the presence or absence of test compounds. At day 3 post-infection, the cells were lysed and cell lysâtes were used to préparé cDNA of both a viral target (the 3’IITR of DENV; Table 2) and a cellular reference gene (β-actin, Table 2). Subsequently, a duplex real time PCR was performed on a Lightcycler480 instrument. The generated Cp value is inversely proportional to the amount of RNA expression of these targets. Inhibition of DENV réplication by a test compound results in a shift of Cp’s for the 3’UTR gene. On the other hand, if a test compound is toxic to the cells, a similar effect on β-actin expression will be observed. The comparative ΔΔΟρ method is used to calculate EC50, which is based on the relative gene expression of the target gene (3’UTR) normalized with the cellular housekeeping gene (β-actin). In addition, CC50 values are determined based on the Cp values acquired for the housekeeping gene β-actin.
Table 2: Primers and probes used for the real-time, quantitative RT-PCR .
Primer/probe | Target | Sequence3'b | ||
F3utr258 | DENV UTR | 3’- | 5'-CGGTTAGAGGAGACCCCTC-3' | |
R3utr425 | DENV UTR | 3’- | 5'-GAGACAGCAGGATCTCTGGTC-3' | |
P3utr343 | DENV UTR | 3’- | FA/W-5'-AAGGACTAG-ZEN- AGGTTAGAGGAGACCCCCC-3'-MgkFQ |
Factin743 | β-actin | 5'-GGCCAGGTCATCACCATT-3' |
Ractin876 | β-actin | 5'-ATGTCCACGTCACACTTCATG-3' |
Pactin773 | β-actin | HEX-5'-TTCCGCTGC-ZEN-CCTGAGGCTCTC-3'lABkFQ |
a Reporter dyes (FAM, HEX) and quenchers (ZEN and lABkFQ) éléments are indicated in bold and italics.
b The nucléotide sequence of the primers and probes were selected from the conserved région in the 3’UTR région of the dengue virus genome, based on the alignment of 300 nucléotide sequences of the four dengue serotypes deposited in Genbank (Gong et al., 2013, Methods Mol Biol, Chapter 16).
The culture medium consisted of minimal essential medium supplemented with 2% of heat-inactivated fêtai calf sérum, 0.04% gentamycin (50 mg/mL) and 2 mM of L-glutamine. Vero cells, obtained from ECACC, were suspended in culture medium and 75 pL/well was added in 96-well plates (10000 cells/well), which already contain the antiviral compounds. Typically, these plates contain a 5-fold serial dilution of 9 dilution steps of the test compound at 200 times the final concentration in 100% DMSO (500 nL; final concentration range: 25 pM 0.000064 pM or 2.5p M - 0.0000064 pM for the most active compounds). In addition, each plate contains wells which are assigned as virus Controls (containing cells and virus in the absence of compound) and cell Controls (containing cells in the absence of virus and compound). Once the cells were added in the plates, the plates were incubated in a fully humidified incubator (37°C, 5% CO2) until the next day. Dengue viruses serotype-1, -2, -3 and -4 were diluted in order to obtain a Cp of -22-24 in the assay. Therefore, 25 pL of virus suspension was added to ail the wells containing test compound and to the wells assigned as virus control. In parallel, 25 pL of culture medium was added to the cell Controls. Next, the plates were incubated for 3 days in a fully humidified incubator (37°C, 5% CO2). After 3 days, the supernatant was removed from the wells and the cells were washed twice with ice-cold PBS (-100 pL). The cell pellets within the 96-well plates were stored at -80°C for at least 1 day. Next, RNA was extracted using the Cells-to-CT™ lysis kit, according to the manufacturées guideline (Life Technologies). The cell lysâtes can be stored at -80°C or immediately used in the reverse transcription step.
In préparation of the reverse transcription step, mix A (table 3A) was prepared and 7.57 pL/well was dispensed in a 96-well plate. After addition of 5 pL of the cell lysâtes, a five minute dénaturation step at 75°C was performed (table 3B). Afterwards, 7.43pL of mix B was added (table 3C) and the reverse transcription step was initiated (table 3D) to generate cDNA.
Finally, a RT-qPCR mix was prepared, mix C (table 4A), and 22.02 pL/well was
-61dispensed in 96-well LightCycler qPCR plates to which 3pL of cDNA was added and the qPCR was performed according to the conditions in table 4B on a LightCycler 480.
Using the LightCycler software and an in-house LIMS system, dose response 5 curves for each compound were calculated and the half maximal effective concentration (EC50) and the half maximal cytotoxic concentration (CC5o) were determined (Tables 5-8).
Table 3: cDNA synthesis using Mix A, dénaturation, Mix B and reverse 10 transcription.
Mix A __________
Plates | 8 | ||||
Samples | 828 | Reaction Vol. (Ml) | 20 | ||
Mix Item | Concentration | Volume for (μΙ) | |||
Unit | Stock | Final | 1 sample | x samples | |
Milli-Q H2O | 7.27 | 6019.56 | |||
R3utr425 | μΜ | 20 | 0.27 | 0.15 | 124.20 |
Ractin876 | μΜ | 20 | 0.27 | 0.15 | 124.20 |
Volume mix/well (μΙ) | 7.57 | ||||
Ce// lysâtes | 5.00 |
B Dénaturation step:
Step | Temp | Time |
Dénaturation | 75°C | 5' |
Hold | 4°C | hold |
C Mix B
Samples | 864 | ||||
Mix Item | Concentration | Volume for (μΙ) | |||
Unit | Stock Final | 1 sample | x samples | ||
Expand HIFI buffer 2 | X | 10.00 | 1.00 | 2.00 | 1728.0 |
MqCI2 | mM | 25.00 | 3.50 | 2.80 | 2419.2 |
dNTPs | mM | 10.00 | 1.00 | 2.00 | 1728.0 |
Rnase inhibitor | U/μΙ | 40.00 | 1.00 | 0.50 | 432.0 |
Exoand RT | U/ul | 50.00 | 0.33 | 0.13 | 112.3 |
Total Volume Mi (μΙ) ___ | 7.43 |
-62Protocol cDNA synthesis
Step | Temp | Time |
Rev transe | 42°C | 30' |
Dénaturation | 99°C | 5' |
Hold | 4°C | hold |
Table 4: qPCR mix and protocol.
A Mix c
Samples | 833 | Reaction Vol. (Ml) | 25 | ||
Mix Item | Concentration | Volume for (μΙ) | |||
Unit | Stock | Final | 1 sample | x samples | |
H2O PCR grade Roche | 7.74 | 6447.42 | |||
Roche 2xMM mix | X | 2 | 1 | 12.50 | 10412.50 |
F3utr258 | μΜ | 20 | 0.3 | 0.38 | 316.54 |
R3utr425 | μΜ | 20 | 0.3 | 0.38 | 316.54 |
P3utr343 | μΜ | 20 | 0.1 | 0.13 | 108.29 |
Factin743 | μΜ | 20 | 0.3 | 0.38 | 316.54 |
Ractin876 | μΜ | 20 | 0.3 | 0.38 | 316.54 |
Pactin773 | μΜ | 20 | 0.1 | 0.13 | 108.29 |
Volume Mix / Tube (μΙ) | 22.02 | ||||
cDNA | 3.00 |
Step | Temp | Time | Ramp rate | |
preincub/denat | 95°C | 10 min | 4.4 | |
Dénaturation | 95°C | 10 sec | 4.4 | |
annealing | 58° C | 1 min | 2.2 | 40 cycles |
Elongation | 72° C | 1 sec | 4.4 | |
Cooling | 40° C | 10 sec | 1.5 |
-63Table 5: ECgo, CCm, and SI for the compounds aqainst serotype 1 in the RT-qPCR assavs
Protocol A | ||||||
RT-g | PCR serotype 1 TC974#666 | |||||
compound# | EC50 (μΜ) | N | CC50 (μΜ) | N | SI | N |
1B | 0.00028 | 4 | 14 | 4 | 34200 | 4 |
2B | 0.00030 | 4 | >2.5 | 4 | >19400 | 4 |
3B | 0.00018 | 3 | >2.5 | 3 | >30300 | 3 |
4B | 0.000048 | 7 | >2.5 | 7 | >85800 | 7 |
5B | 0.00074 | 4 | >2.5 | 4 | >6700 | 4 |
6B | 0.00047 | 3 | >2.5 | 3 | >8420 | 3 |
7B | 0.00061 | 3 | >2.5 | 3 | >6020 | 3 |
8B | 0.00015 | 4 | >2.5 | 4 | >30700 | 4 |
9B | 0.00022 | 4 | >2.5 | 4 | >24000 | 4 |
10A | 0.00016 | 4 | >2.5 | 4 | >33300 | 4 |
11B | 0.00067 | 4 | >2.5 | 4 | >6970 | 4 |
12B | 0.00068 | 3 | >2.5 | 3 | >6820 | 3 |
N= the numberof independent experiments in which the compounds were tested.
Table 6: ECsn, CCgn, and SI for the compounds aqainst serotype 2 in the RT-qPCR
assays | ||||||
Protocol A | ||||||
RT-qPCR serotype | 216681 | |||||
compound# | EC50 (μΜ) | N | CC50 (μΜ) | N | SI | N |
1B | 0.00048 | 4 | 18 | 3 | 38000 | 3 |
2B | 0.00028 | 3 | 14 | 3 | 76100 | 3 |
3B | 0.00012 | 3 | 10 | 3 | 81700 | 3 |
4B | 0.000060 | 7 | >2.5 | 5 | >65500 | 5 |
5B | 0.00017 | 3 | >2.5 | 3 | >16000 | 3 |
6B | 0.00015 | 3 | >2.5 | 3 | >23800 | 3 |
7B | 0.00028 | 4 | >2.5 | 4 | >34500 | 4 |
8B | 0.000062 | 3 | >2.5 | 3 | >43700 | 3 |
9B | 0.00030 | 3 | >2.5 | 3 | >18200 | 3 |
10A | 0.00020 | 3 | >2.5 | 3 | >24400 | 3 |
11B | 0.00017 | 3 | >2.5 | 3 | >18300 | 3 |
12B | 0.00022 | 3 | >2.5 | 3 | >12900 | 3 |
N= the number of independent experiments in which the compounds were tested.
-64Table 7: ECso, CC50, and SI for the compounds against serotype 3 in the RT-qPCR
Protocol A | ||||||
R' | Γ-qPCR serotype 3 H87 | |||||
compound# | EC5o (μΜ) | N | CC50 (μΜ) | N | SI | N |
1B | 0.0034 | 3 | >2.5 | 3 | >909 | 3 |
2B | 0.0046 | 3 | >2.5 | 3 | >1200 | 3 |
3B | 0.0011 | 3 | >2.5 | 3 | >5170 | 3 |
4B | 0.00066 | 7 | >2.5 | 6 | >5610 | 6 |
5B | 0.0046 | 3 | >2.5 | 3 | >1050 | 3 |
6B | 0.0017 | 3 | >2.5 | 3 | >2170 | 3 |
7B | 0.0058 | 3 | >2.5 | 3 | >1080 | 3 |
8B | 0.0010 | 3 | >2.5 | 3 | >2740 | 3 |
9B | 0.0041 | 3 | >2.5 | 3 | >1360 | 3 |
10A | 0.0021 | 3 | >2.5 | 3 | >1290 | 3 |
11B | 0.0054 | 3 | >2.5 | 3 | >604 | 3 |
12B | 0.0041 | 3 | >2.5 | 3 | >1240 | 3 |
N= the number of independent experiments in which the compounds were tested.
Table 8: ECso, CCso, and SI for the compounds against serotype 4 in the RT-gPCR
Protocol A | ||||||
RT-qPCR serotype | 4 H241 | |||||
compound# | Ε050(μΜ) | N | CC50 (μΜ) | N | SI | N |
1B | 0.051 | 4 | 8.3 | 3 | 173 | 3 |
2B | 0.030 | 4 | 9.5 | 4 | 587 | 4 |
3B | 0.014 | 3 | 1.2 | 3 | 85 | 3 |
4B | 0.011 | 10 | 9.1 | 9 | 682 | 9 |
5B | 0.024 | 3 | 9.6 | 3 | 530 | 3 |
6B | 0.016 | 3 | >2.5 | 3 | >232 | 3 |
7B | 0.025 | 3 | 9.4 | 3 | 531 | 3 |
8B | 0.012 | 3 | 5.8 | 3 | 334 | 3 |
9B | 0.031 | 3 | 15 | 3 | 570 | 3 |
10A | 0.010 | 3 | 15 | 2 | 2640 | 2 |
11B | 0.022 | 3 | 11 | 3 | 697 | 3 |
12B | 0.028 | 3 | 10 | 3 | 348 | 3 |
N= the number of independent experiments in which the compounds were tested.
-65Prior art examples
Compounds (56) and (170) disclosed in WO-2013/045516 hâve been tested in an analogous DENV-2 antiviral assay as the compounds of the présent invention and 5 their reported activity is listed below.
Table 9 : EC50, CC50, and SI for compounds (56) and(170) disclosed in the io DENV-2 antiviral assay
compound# | EC50(mM) | CC50 (μΜ) | SI |
(56) of WO-2013/045516 | 0.45 | > 139 | > 312 |
(170) of WO-2013/045516 | 0.44 | 26 | 58 |
Abbreviations used in experimental part
(M+H)+ | protonated molecular ion | iPrNH2 | isopropylamine |
aq._______ | aqueous | IprOH | 2-prppanol |
Boc | tert-butyloxycarbonyl | K2CO3 | potassium carbonate |
Boc2O | di-tert-butyl dicarbonate | K3PO4 | potassium orthophosphate |
br | broad | LiAIH4 | lithium aluminium hydride |
CH3CN | acetonitrile | m/z | mass-to-charge ratio |
CHCh | chloroform | Me | methyl |
CH2CI2 | dichloromethane | MeOH | methanol ___ |
CO2 | carbon dioxide | MgSO4 | magnésium sulfate ______ |
d | doublet | min | minute(s) |
DCM | dichloromethane | n2 | nitrogen ________ |
DIEA | diisopropylethylamine | Na2CO3 | sodium carbonate__ |
DIPE | diisoprppyl ether | Na2SO4 | sodium sulfate |
DMA | dimethylacetamide | NaBH4 | sodium borohydride |
DMAP | 4-dimethylaminopyridine | NaHCO3 | sodium bicarbonate |
DME | 1,2-dimethoxyethane | NaNO2 | sodium nitrite |
DMF | dimethylformamide | NaOH | sodium hydroxide |
DMSO | dimethyl sulfoxide | q | quartet |
eq. | équivalent | rt or RT | room température |
Et2O | diethyl ether | s | singlet |
Et3N | triethylamine | t | triplet |
EtOAc | ethyl acetate | tBuOH | tert-butanol |
EtOH | éthanol | TEA | triethylamine |
H2O | water | TFA | trifluoroacetic acid |
h2so4 | su If u rie acid | THF | tetrahydrofuran |
HCl | hydrochloric acid | TMSCI | trimethylsilyl chloride |
HPLC | high performance liquid chromatography |
Claims (26)
1. A compound having formula (I)
a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof, wherein the compounds are selected from the group comprising:
5
2. A compound of formula 4 according to claim 1 ci
O a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof.
3. A compound, a stereoisomeric form, a pharmaceutically acceptable sait, 10 solvaté or polymorph thereof according to any one of claims 1 or 2, wherein said compound is: Enantiomer 4A, wherein
-691H NMR (500 MHz, DMSO-d6) δ ppm 1.87 (quin, 7=6.7 Hz, 2 H) 2.34 (br t, 7=7.3 Hz, 2 H) 3.08 - 3.27 (m, 2 H) 3.62 (s, 3 H) 3.85 (brt, 7=6.3 Hz, 2 H) 3.99 - 4.11 (m, 1 H) 4.47 - 4.57 (m, 1 H) 5.57 (br s, 1 H) 5.76 (s, 1 H) 5.95 (br d, 7=10.1 Hz, 2 H) 6.45 (br s, 1 H) 7.01 (brd, 7=7.6 Hz, 1 H) 7.34 (brd, 7=7.9 Hz, 1 H) 7.44 (br d, 7=8.5 Hz, 2 H) 7.55 (br d, 7=8.2 Hz, 2 H) 8.04 (br s, 1 H) 12.12 (brs, 1 H);
LC/MS (method LC-A): Rt 2.95 min, MH+ 579;
[oc]D 20: -48.5° (c 0.27, DMF);
Chiral SFC (method SFC-A): Rt 1.13 min, MH+ 579, chiral purity 100%.
4. A compound, a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof according to any one of claims 1 or 2, wherein said compound is: Enantiomer 4B, wherein, 1H NMR (500 MHz, DMSO-c/β) δ ppm 1.87 (br t, 7=6.8 Hz, 2 H) 2.34 (br t, 7=7.3 Hz, 2 H) 3.09 - 3.27 (m, 2 H) 3.62 (s, 3 H) 3.85 (br t, 7=6.1 Hz, 2 H) 3.99 - 4.10 (m, 1 H) 4.46 - 4.59 (m, 1 H) 5.57 (s, 1 H) 5.76 (br s, 1 H) 5.95 (br d, 7=10.1 Hz, 2 H) 6.45 (br s, 1 H) 7.01 (br d, 7=7.9 Hz, 1 H) 7.34 (br d, 7=7.9 Hz, 1 H) 7.44 (br d, 7=8.2 Hz, 2 H) 7.55 (br d, 7=8.2 Hz, 2 H) 8.04 (br s, 1 H) 12.12 (brs, 1 H)
LC/MS (method LC-A): Rt 2.94 min, MH+ 579 [a]D 20:+42.9° (c 0.28, DMF)
Chiral SFC (method SFC-A): Rt 2.13 min, MH+ 579, chiral purity 100%
5. A compound, a pharmaceutically acceptable sait, solvaté, or polymorph thereof according to any one of claims 1 to 4, wherein said compound is in a crystalline form.
6. A compound, a pharmaceutically acceptable sait, or solvaté thereof according to any one of claims 1 to 4, wherein said compound is in an amorphous form.
7. A compound, a pharmaceutically acceptable sait, solvaté, or polymorph thereof according to any one of claims 1 to 4, wherein said compound is in an un-solvated form.
8. A pharmaceutical composition comprising a compound according to any one of claims 1 to 7 or its stereoisomeric form, a pharmaceutically acceptable sait,
-70solvaté or polymorph thereof together with one or more pharmaceutically acceptable excipients, diluents or carriers.
9. A compound according to any one of daims 1 to 7 or its stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof or a pharmaceutical composition according to claim 8 for use as a médicament.
10. A compound according to any one of daims 1 to 7 or its stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof or a pharmaceutical composition according to claim 8 for use in the treatment of dengue.
11. Use of a compound according to claim 1 or its stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof, in the manufacture of a pharmaceutical composition for the treatment dengue.
12. A use of a compound as represented by any of the structural formula from any one of daims 1 to 7, a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof for inhibiting the réplication of dengue virus(es) in a biological sample.
13. The use of a compound according to claim 12 further comprising coadministering an additional therapeutic agent.
14. The use of claim 13 wherein said additional therapeutic agent is selected from an antiviral agent or dengue vaccine, or both.
15. A compound as represented by any of the structural formula from any one of daims 1 to 7, a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof comprising a mono- or di-substituted indole group for use in inhibiting the réplication of dengue virus(es) in a patient.
16. Use of a compound as represented by any of the structural formula from any one of daims 1 to 7, a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof comprising a mono- or di-substituted indole group, in the manufacture of a pharmaceutical composition for inhibiting the réplication of dengue virus(es) in a patient.
-7117. The compound as claimed in any compound is one of claims 1 or 5 to 7 wherein the
OH
OH
MeO
OH
MeO or a pharmaceutically acceptable sait, solvaté or polymorph thereof.
18. The compound as claimed in any one of claims 1-2 or 5-7, wherein the compound is
or a pharmaceutically acceptable sait, solvaté or polymorph thereof.
19. A pharmaceutical composition comprising a compound according to any one of claims 17 or 18, a pharmaceutically acceptable sait, solvaté or polymorph thereof together with one or more pharmaceutically acceptable excipients, diluents or carriers.
20. A compound according to any one of claims 17 or 18, a pharmaceutically acceptable sait, solvaté or polymorph thereof or a pharmaceutical composition according to claim 19 for use as a médicament.
21. A compound according to any one of claims 17 or 18, a pharmaceutically acceptable sait, solvaté or polymorph thereof or a pharmaceutical composition according to claim 19 for use in the treatment of dengue.
22. Use of a compound according to any one of claims 17 or 18 or its stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof, in the manufacture of a pharmaceutical composition for the treatment of dengue
23. A use of a compound as represented by any of the structural formula from any one of claims 17 or 18, a pharmaceutically acceptable sait, solvaté or polymorph thereof comprising a mono- or di-substituted indole group for inhibiting the réplication of dengue virus(es) in a biological sample.
24. The use according to claim 23 which use further comprises co-administering an additional therapeutic agent.
25. The use according to claim 24 wherein said additional therapeutic agent is selected from an antiviral agent or dengue vaccine, or both.
26. A compound as represented by any of the structural formula from any one of daims 17 or 18, a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof comprising a mono- or di-substituted indole group for use in inhibiting the réplication of dengue virus(es) in a patient.
27. Use of a compound as represented by any of the structural formula from any one of daims 17 or 18, a stereoisomeric form, a pharmaceutically acceptable sait, solvaté or polymorph thereof comprising a mono- or di-substituted indole group, in the manufacture of a pharmaceutical composition for inhibiting the 10 réplication of dengue virus(es) in a patient.
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP16163488.6 | 2016-04-01 |
Publications (1)
Publication Number | Publication Date |
---|---|
OA19265A true OA19265A (en) | 2020-06-05 |
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