OA17353A - Virus like particle composition. - Google Patents
Virus like particle composition. Download PDFInfo
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- OA17353A OA17353A OA1201400377 OA17353A OA 17353 A OA17353 A OA 17353A OA 1201400377 OA1201400377 OA 1201400377 OA 17353 A OA17353 A OA 17353A
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Abstract
The present invention provides a particle comprising a polypeptide and at least one antigen, and a composition comprising thereof.
Description
This application claims the benefit of U.S. provisional Patent Application No.:61/599,746 filed on February 16, 2012, the entire contents of which are incorporated by reference herein. TECHNICAL FIELD
The présent invention relates to a particle comprising a polypeptide and at least one antigen, and a composition comprising thereof.
BACKGROUND
Virus-like particles (VLPs) are multiprotein structures that mimic the organization and conformation of authentic native viruses but lack the viral genome, potentially yielding safer and cheaper vaccine candidates. A handful of prophylactic VLP-based vaccines is currently commercialized worldwide: GlaxoSmithKIine’s Engerix® (hepatitis B virus) and Cervarix® (human papillomavirus), and Merck and Co., Inc.’s Recombivax HB® (hepatitis B virus) and Gardasil® (human papillomavirus) are some examples. Other VLP-based vaccine candidates are in clinical trials or undergoing preclinical évaluation, such as, influenza virus, parvovirus, Norwalk and various chimeric VLPs. Many others are still restricted to small-scale fundamental research, despite their success in preclinical tests. The implications of large-scale VLP production are discussed in the context of process control, monitorization and optimization. The main up- and down-stream technical challenges are identified and discussed accordingly. Successful VLP-based vaccine blockbusters are briefly presented concomitantly with the latest results from clinical trials and the recent developments in chimeric VLP-based technology for either therapeutic or prophylactic vaccination (Expert Rev. Vaccines 9(10), 1149-1176, 2010).
Chikungunya virus (CHIKV) has infected millions of people in Africa, Europe and Asia since this alphavirus reemerged from Kenya in 2004. The severity of the disease and the spread of this épidémie virus présent a serious public health threat in the absence of vaccines or antiviral thérapies. It is reported that a VLP vaccine for épidémie Chikungunya virus protects non-human primates against infection (Nat Med. 2010 March; 16(3): 334-338). US patent publication No. 2012/0003266 discloses a virus-like particle (VLP) comprising one or more Chikungunya virus structural polypeptides which is useful for formulating a vaccine or antigenic composition for Chikungunya that induces immunity to an infection or at least one symptom thereof. WO2012/106356 discloses modified alphavirus orflavivirus virus-like particles (VLPs) and methods for enhancing production of modified VLPs for use in the prévention or treatment of alphavirus and flavivirus-mediated diseases. (these cited référencés are herein incorporated by reference).
SUMMARY OF THE INVENTION
In the first aspect, the présent invention provides a particle which is capable of being self-assembled, comprising a polypeptide and at least one antigen, wherein said polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said polypeptide and said antigen are linked through said at least one first and said at least one second attachment site.
In the second aspect, the présent invention provides a nucleic acid molécule comprising a nucléotide sequence that encodes a particle provided in the first aspect of the présent invention.
In the third aspect, the présent invention provides a composition comprising the particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention.
In the fourth aspect, the présent invention provides a method of producing an antibody, comprising contacting the particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention to a mammal.
In the fifth aspect, the présent invention provides a method of immunomodulation, a method of treating an autoimmune disease, a method of inducing and/or enhancing immune response against an antigen in a mammal, and a method of treating cancer comprising administering the composition provided in the third aspect of the présent invention to a mammal.
In sixth aspect, the présent invention provides a method of passive immunization, comprising administering the antibody provided in the fourth aspect of the présent invention to a mammal.
In seventh aspect, the présent invention provides a method of presenting an antigen on macrophage, comprising contacting the particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention to a mammal.
In eighth aspect, the présent invention provides a method for producing the particle provided in the first aspect of the présent invention, comprising preparing a gene comprising a nucléotide sequence encoding said particle; culturing a cell which is transfected with said gene to express said particle; and recovering said particle.
BRIEF DESCRIPTION OF THE DRAWINGS
Fig.1 shows modification of TNF alpha sequence to be inserted into Venezuelan Equine Encephalitis virus (VEEV) structural polypeptide.
Fig.2 shows results of Western Blot which indicates that TNF alpha conjugated VLP was expressed.
Fig.3 shows VLP_CHI 512 vector.
Fig.4 shows VLP_CHI 532 vector.
Fig. 5 shows VLP_CHI 520 vector.
Fig.6 shows VLP_VEEV VLP 518 vector.
Fig.7 shows VLP_VEEV VLP 519 vector.
Fig.8 shows VLP_VEEV VLP 538 vector.
Fig. 9 shows détection of anti-TNF alpha antibodies induced by TNF alpha derived peptideconjugated virus like particle.
Fig. 10 shows détection of anti-human CD20 antibodies induced by CD20 derived peptideconjugated virus like particle.
Fig. 11 shows détection of anti-mouse CD20 antibodies induced by CD20 derived peptideconjugated virus like particle.
DETAILED DESCRIPTION OF THE INVENTION (1) A particle comprising a polypeptide and at least one antiqen
In the first aspect, the présent invention provides a particle which is capable of being self-assembled, comprising a polypeptide and at least one antigen, wherein said polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said polypeptide and said antigen are linked through said at least one first and said at least one second attachment site.
As used herein, a particle which is capable of being self-assembled refers to a particle formed by at least one constituent which is spontaneously assembled. The constituent may be a polypeptide or non-peptide chemical compound. In one embodiment, a particle which is capable of being self-assembled may be a particle comprising or consisting of at least one polypeptide. The at least one polypeptide consists of one or more kinds of peptide. In one embodiment, said particle has a diameter of at least 10nm, for example, at least 20nm, preferably at least 50nm. In one embodiment, molecular weight of said particle is from 100 kDa to 100,000 kDa, preferably from 400kDa to 30,000kDa.
A polypeptide used for the présent invention is not limited as long as it is spontaneously assembled. The polypeptide may be a virus structural polypeptide. Thus, the particle provided by the présent invention may be a virus like particle.
A virus structural polypeptide may be a naturally occurring viral polypeptide or modified polypeptide thereof. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring viral structural polypeptide including capsid and envelope protein. In one embodiment, the modified polypeptide is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added to a naturally occurring viral structural polypeptide including capsid and envelope protein.
In one embodiment, virus structural polypeptide used for the présent invention consists of or comprises capsid and/or envelope protein or fragment thereof. For example, an envelope protein comprises at least one selected from the group consisting of E3, E2, 6K and E1. Virus structural polypeptide used for the présent invention may be derived from Alphavirus or Flavivirus. Thus, the particle provided by the présent invention may be a virus like particle derived from Alphavirus or Flavivirus.
Examples of Alphavirus and Flavivirus include, but not limited to, Aura virus, Babanki virus, Barmah Forest virus (BFV), Bebaru virus, Cabassou virus, Chikungunya virus (CHIKV), Eastern equine encephalitis virus (EEEV), Eilat virus, Everglades virus, Fort Morgan virus, Getah virus, Highlands J virus, Kyzylagach virus, Mayaro virus, Me Tri virus, Middelburg virus, Mosso das Pedras virus, Mucambo virus, Ndumu virus, O'nyong-nyong virus, Pixuna virus, Rio Negro virus, Ross River virus (RRV), Salmon pancréas disease virus, Semliki Forest virus, Sindbis virus,
Southern éléphant seal virus, Tonate virus, Trocara virus, Una virus, Venezuelan equine encephalitis virus (VEEV), Western equine encephalitis virus (WEEV).Whataroa virus, West Nile virus, dengue virus, tick-borne encephalitis virus and yellow fever virus.
As used herein, the term antigen refers to a molécule capable of being bound by an antibody or a T cell receptor (TCR) if presented by MHC molécules. The term antigen, as used herein, also encompasses T-cell epitopes. A T-cell epitope is recognized by a T-cell receptor in the context of a MHC class I, présent on ail cells of the body except érythrocytes, or class II, présent on immune cells and in particular antigen presenting cells. This récognition event leads to activation of T-cells and subséquent effector mechanisms such as prolifération of the T-cells, cytokine sécrétion, perforin sécrétion etc. An antigen is additionally capable of being recognized by the immune System and/or being capable of inducing a humoral immune response and/or cellular immune response leading to the activation of B- and/or T-lymphocytes. This may, however, require that, at least in certain cases, the antigen contains or is linked to a TH cell epitope and is given in adjuvant. An antigen can hâve one or more epitopes (B- and Tepitopes). The spécifie reaction referred to above is meant to indicate that the antigen will preferably react, typically in a highly sélective manner, with its corresponding antibody or TCR and not with the multitude of other antibodies or TCRs which may be evoked by other antigens. Antigens as used herein may also be mixtures of several individual antigens. Antigens, as used herein, include but are not limited to allergens, self antigens, haptens, cancer antigens (i.e. tumor antigens) and infectious disease antigens as well as small organic molécules such as drugs of abuse (like nicotine) and fragments and dérivatives thereof. Furthermore, antigens used for the présent invention can be peptides, proteins, domains, carbohydrates, alkaloids, lipids or small molécules such as, for example, steroid hormones and fragments and dérivatives thereof, autoantibody and cytokine itself.
Examples of cytokines include, but are not limited to, interleukin (IL) including over 30 type such as IL-1a, IL-1 β, IL-2, -3, -4, -5, -6, -7, -8, -9, -10, -11 to -37; interferon (IFN) such as
IFN-α, IFN-β and IFN-γ; tumor necrosis factor (TNF) such as TNF-α and TNF-β; transforming growth factor (TGF) such as TGF-α and TGF-β; colony stimulating factor (CSF) such as granulocyte-colony-stimulating factor (G-CSF), granulocyte-macrophage-colony-stimulating factor (GM-CSF), macrophage-colony Stimulating factor (M-CSF), erythropoietin (EPO), stem cell factor (SCF) and monocyte chemotactic and activating factor (MCAF); growth factor (GF) such as epidermal growth factor (EGF), fibroblast growth factor (FGF), insulin like growth factor (IGF), nerve growth factor (NGF), Brain-derived neurotrophic factor (BDNF), platelet derived growth factor (PDGF), vascular endothélial growth factor (VEGF), hépatocyte growth factor (HGF), kératinocyte growth factor (KGF), thrombopoietin (TPO), and bone morphogenic protein (BMP); and other polypeptide factors including LIF, kit ligand (KL), MPO (Myeloperoxidase) and CRP (C-reactive protein) ; COX (Cyclooxygenase) such as COX-1, COX-2 and COX-3, NOS (Nitric oxide synthase) such as NOS-1, NOS-2 and NOS-3; and so on.
Cytokines also includes chemokines which are cytokines that induce chemotaxis. There are two major classes of chemokines, CXC and CC. The CXC chemokines, such as neutrophil-activating protein-2 (NAP-2) and melanoma growth stimulatory activity protein (MGSA) are chemotactic primarily for neutrophils and T lymphocytes, whereas the CC chemokines, such as RANTES, Macrophage inflammatory protein (MIP) including MIP-la and ΜΙΡ-Ιβ, keratinocyte-derived chemokine (KC), the monocyte chemotactic proteins (MCP-1, MCP-2, MCP-3, MCP-4, and MCP-5) and the eotaxins (-1 and -2) are chemotactic for, among other cell types, macrophages, T lymphocytes, eosinophils, neutrophils, dendritic cells, and basophils. There also exist the chemokines lymphotactin-1, lymphotactin-2 (both C chemokines), and fractalkine (a CX3C chemokine) that do not fall into either of the major chemokine subfamilies.
As used herein, the term antigenic déterminant is meant to refer to that portion of an antigen that is specifically recognized by either B-or T-lymphocytes. B-lymphocytes respond to foreign antigenic déterminants via antibody production, whereas T-lymphocytss are the mediator of cellular immunity. Thus, antigenic déterminants or epitopes are those parts of an antigen that are recognized by antibodies, or in the context of an MHC, by T-cell receptors. An antigenic déterminant contains one or more epitopes.
As used herein, the term antibody refers to molécules which are capable of binding an epitope or antigenic déterminant. The term is meant to include whole antibodies and antigenbinding fragments thereof, including single-chain antibodies. Such antibodies include human antigen binding antibody fragments and include, but are not limited to, Fab, Fab' and F(ab')2, Fd, single-chain Fvs (scFv), single-chain antibodies, disulfide-linked Fvs (sdFv) and fragments comprising either a VL or VH domain. The antibodies can be from any animal origin including birds and mammals. Preferably, the antibodies are mammalian e.g. human, murine, rabbit, goat, guinea pig, camel, horse and the like, or other suitable animais e.g. chicken. As used herein, human antibodies include antibodies having the amino acid sequence of a human immunoglobulin and include antibodies isolated from human immunoglobulin libraries or from animais transgenic for one or more human immunoglobulins and that do not express endogenous immunoglobulins, as described, for example, in U.S. Patent No. 5,939,598, the disclosure of which is incorporated herein by reference in its entirety.
Antigen may be a substance (e.g. protein) which is not derived from virus (e.g. Chikungunya virus, Venezuelan equine encephalitis virus).
In one embodiment, antigen which is used for the présent invention is at least one target or a polypeptide therefrom as listed in Table 1.
[Table 1]
Table 1
Target | Use |
GD2 | neuroblastoma |
CA-125 (imitation) | ovarien cancer |
CD41 (integrin alpha-Hb) | platelet aggregation inhibitor |
TNF-a | rheumatoid arthritis etc. |
EpCAM | prostate and breast cancer |
TNF-a | sepsîs |
CD20 | lymphoma |
VEGFR2 | cancer |
IL-6 | rheumatoid arthritis |
CD52 | CLL CTCL |
CEA | colorectal cancer |
TAG-72 | non-small cell lung carcinoma |
HLA-DR | hematological cancers |
CEA | gastrointesb'nal cancers |
L-selectin (CD62L) | severely injured patients |
IL-6 receptor | rheumatoid arthritis |
Rhésus factor | hemolytic disease of the newbom |
beta amyloid | Alzheimer s disease |
CD25 (a chain of IL—2 receptor) | prévention of organ transplant rejections |
phosphatidylserine | cancer, viral infections |
CD22 | non-Hodgkin’s lymphoma |
BAFF | non-Hodgkin lymphoma etc. |
CD 125 | asthma |
CCL11 (eotaxin-1) | severe allergie disorders |
CEA-related antigen | inflammatory lésions and métastasés |
VEGF-A | metastatic cancer |
fibrin Π. beta chain | thromboembolism |
CD44 v6 | scuamous cell carcinoma |
CD19 | cancer |
CD30 (TNFRSF8) | hématologie cancers |
IL-12,1L-23 | psoriasis, rheumatoid arthritis. inflammatory bowel diseases. multiple sclerosis |
IL—1 | rheumatoid arthritis |
mucin CanAg | colorectal cancer etc. |
prostatic carcinoma cells | prostate cancer |
EpCAM. CD3 | ovarian cancer, malignant ascites, gastric cancer |
TAG-72 | tumor détection |
CD4 | prévention of organ transplant reiections. treatment of autoimmune diseases |
TNF-a | Crohn's disease |
EGFR | metastatic colorectal cancer and head and neck cancer |
EpCAM | ovarian cancer and other solid tumors |
IGF-1 receptor | solid tumors |
CD4 | rheumatoid arthritis |
MUC1 | pancreatic cancer |
TRAIL-R2 | cancer |
Influenza A hemagglutinin | infectious disease/influenza A |
CD40 | hématologie cancers |
CD25 ( a chain of IL—2 receptor) | prévention of organ transplant reiections |
RANKL | osteoporosis. bone métastasés etc. |
B-lvmphoma cell | lymphoma |
GD3 ganglioside | malignant melanoma |
C5 | paroxysmal noctumal hemoglobinuria |
endotoxin | sepsis caused by Gram-negative bacteria |
EpCAM | colorectal carcinoma |
LFA-1 (CD 11a) | psoriasis (blocks T-cell migration) |
Hsp90 | invasive Candida infection |
SLAMF7 | multiple myeloma |
CD22 | cancer. SLE |
ITGB2 (CD18) | heart attack, stroke. traumatic shock |
HER2/neu. CD3 | breast cancer etc. |
integrin ανβ 3 | melanoma. prostate cancer, ovarian cancer etc. |
hepatitis B surface antigen | hepatitis B |
CD15 | appendicitis |
folate receptor 1 | ovarian cancer |
Table 1 -continued-
Target | Use |
respiratory syncytial virus | respiratory syncytial virus infection |
IL—22 | rheumatoid arthritis. psoriasis |
IGF-1 receptor | adrenocortical carcinome, non-small cell lung carcinoma etc. |
IFN-T | Crohn's disease etc. |
rabies virus gfycoprotein | rabies (prophylaxis) |
TGF-β | idiopathic pulmonary fibrosis, focal segmentai glomerulosclerosis, cancer |
CD80 | B-cell lymphoma |
beta amyloid | Alzheimer s disease |
CD 147 (basigin) | graft versus host disease |
CD33 | acute myelogenous leukemia |
carbonic anhydrase 9 (CA-IX) | clear cell rénal cell carcinoma |
GPNMB | melanoma, breast cancer |
TNF-a | rheumatoid arthritis. psoriatic arthritis. ankylosing spondylitis |
CD23 (IgE receptor) | allergie asthma |
CD4 | HIV infection |
CD20 | non-Hodgkin's lymphoma |
CA-125 | ovarian cancer |
cardiac myosin | cardiac imaging |
TNF-a | rheumatoid arthritis, ankylosing spondylitis, psoriatic arthritis, psoriasis, Crohn's disease. ulcerative colitis |
CD51 | solid tumors (prostate cancer, melanoma) |
CD25 ( a chain of IL-2 receptor) | graft versus host disease |
CD22 | cancer |
CD152 | melanoma |
CD30 (TNFRSF8) | Hodgkin's lymphoma |
CD4 | chronic asthma |
CEA | colorectal cancer |
IL-13 | asthma |
NCA-90 (granulocyte antigen) | diagnostic agent |
TGF beta 2 | réduction of scarring after glaucome surgery |
TRAIL-R2 | cancer |
hepatitis B surface antigen | hepatitis B |
CD33 | cancer |
CD58 | cancer |
CD40 | multiple myeloma, non-Hodgkin's lymohoma, Hodgkin's lymphoma |
CD23 (IgE receptor) | chronic lymphocytic leukemia |
TRAIL-R1 | cancer |
EGFR | colorectal, lung and stomach cancer |
IL—5 | asthma and white blood cell diseases |
TGF beta 1 | systemic scleroderma |
CD74 | multiple myeloma and other hematological malignancies |
GD3 ganglioside | small cell lung carcinoma |
respiratory syncytial virus | respiratory syncytial virus (prévention) |
CD3 | prévention of organ transplant rejections |
C242 antigen | colorectal cancer |
5T4 | non-small cell lung carcinoma. rénal cell carcinoma |
integrin a 4 | multiple sclerosis. Crohn's disease |
endotoxin | sepsis |
EGFR | non-small cell lung carcinoma |
EGFR | squamous cell carcinoma. head and neck cancer, nasopharyngeal cancer, glioma |
CD20 | rheumatoid arthritis. lupus erythematosus etc. |
LFA-1 (CD lia) | prévention of organ transplant rejections. immunological diseases |
CD20 | chronic lymphocytic leukemia etc. |
PDGF-R a | cancer |
IgE Fc région | allergie asthma |
EpCAM | cancer |
CA-125 | ovarian cancer |
CD3 | diabètes mellitus type 1 |
lipoteichoic acid | sepsis (Staphylococcus) |
respiratory syncytial virus | respiratory syncytial virus (prévention) |
EGFR | colorectal cancer |
Table 1 -continued-
Target | Use |
respiratory syncytial virus | respiratory syncytial virus (prévention) |
EGFR | colorectal cancer |
Pseudomonas aeruginosa | Pseudomonas aeruginosa infection |
IL-4 | asthma |
MUC1 | cancer |
HER2/neu | cancer |
C5 | réduction of sida effects of cardiac surgerv |
adenocarcinoma antigen | adenocarcinoma |
CD4 | Crohn's disease. multiple sclerosis |
vimentin | braïn cancer |
CCR5 | HIV infection |
rabies virus glycoprotein | rabies (prophylaxis) |
VEGFR2 | solid tumors |
VEGF-A | maculer degeneration (wet form) |
anthrax toxin. protective antigen | anthrax (prophylaxis and treatment) |
cytomégalovirus glycoprotein B | cytomégalovirus infection |
IL—5 | inflammations of the airwavs. skin and gastrointestinal tract |
HGF | solid tumors |
CD20 | lymphomas. leukemias, some autoimmune disorders |
IGF-1 receptor | cancer |
IFN-a | systemic lupus ervthematosus |
CDU, CD18 | haemorrhagic shock etc. |
CD154 (CD40L) | rheumatic diseases |
TAG-72 | cancer |
cytomégalovirus | cytomégalovirus infection |
FAP | cancer |
IFN-a | SLE. dermatomyositis, polymyositis |
CD2 | psoriasis, graft-versus-host disease (prévention) |
beta amyloid | Alzheimer's disease |
sphingosine-1 -phosphate | choroidal and retinal neovascularization |
myostatin | muscular dystrophy |
NCA-90 (granulocyte antigen) | osteomyelitis |
alpha -fetoprotein | cancer |
integrin allb$3 | percutaneous coronary intervention |
IgE | allergie reaction |
NGF | pain |
CD19 | cancer |
dumping factor A | Staphylococcus aureus infection |
tenascin C | cancer |
CD3 | diabètes mellitus type 1 |
CD28 | chronic Ivmphocvtîc leukemia. rheumatoid arthritis |
CTLA-4 | cancer |
TRAIL-R2 | cancer |
IL-13 | Hodgktn’s lymphoma |
IL—6 receptor | rheumatoid arthritis |
CD154CCD40L) | rheumatoid arthritis, lupus nephritis etc. |
CD20 | follicular lymphoma |
HER2/neu | breast cancer |
CTLA-4 | cancer |
EpCAM | cancer |
hepatitis B virus | chronic hepatitis B |
Escherichia coli | diarrhoea caused by E. coli |
IL-12, IL-23 | multiple sclerosis. psoriasis, psoriatic arthritis |
integrin a4j87 | Crohn's disease. ulcerative colitîs |
CD20 | non-Hodgkin's lymphoma |
AOC3 (VAP-1) | inflammation |
CD3 | Crohn’s disease, ulcerative colitis |
integrin a5B 1 | solid tumors |
tumor antigen CTAA16.88 | colorectal tumors |
EGFR | squamous cell carcinome of the head and neck |
CD4 | rheumatoid arthritis. psoriasis. T-cell lymphoma |
CD5 | systemic lupus erythematosus, graft-versus-host disease |
ln one embodiment, antigen which is used for the présent invention is at least one protein or a polypeptide therefrom selected from the group consisting of CTLA-4, PD-1, TIM-3, BTLA, VISTA, LAG-3, CD28, 0X40, GITR, CD137, CD27 and HVEM. CTLA-4, PD-1, TIM-3,
BTLA, VISTA and LAG-3 are inhibitory receptors for T-cell stimulation, and CD28, 0X40, GITR, CD137, CD27 and HVEM are activating receptors for T-cell stimulation (see Mellman et al., Nature 480, 480-489 (2011)).
The antigen used for the présent invention can be modified polypeptide derived from a naturally occurring protein. The modified polypeptide may be a fragment of the naturally occurring protein. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a polypeptide derived from a naturally occurring protein. In one embodiment, the modified polypeptide derived is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a polypeptide derived from naturally occurring protein.
In the particle as provided by the présent invention, a polypeptide and an antigen may be linked through at least one first attachment site which is présent in the polypeptide and at least one second attachment site which is présent in the antigen.
As used herein, each of a first attachment site and a second attachment site refers to a site where more than one substance is linked each other.
In one embodiment, the polypeptide and the antigen are directly fused. Altematively, one or two linkers may intervene between N-terminal residue of the antigen and the polypeptide and/or between C-terminal residue of the antigen and the polypeptide.
The antigen or the polypeptide can be truncated and replaced by short linkers. In some embodiments, the antigen or the polypeptide include one or more peptide linkers. Typically, a linker consists of from 2 to 25 amino acids. Usually, it is from 2 to 15 amino acids in length, although in certain circumstances, it can be only one, such as a single glycine residue.
In one embodiment, a nucleic acid molécule, in which polynucleotide encoding the polypeptide is genetically fused with polynucleotide encoding the antigen, is expressed in a host cell so that the first attachment site and the second attachment site are linked through a peptide bond. In this case, the polypeptide and the antigen are linked through a peptide bond. Relating to this embodiment, the first attachment site and/or the second attachment site may be genetically modified from the original polypeptide or antigen. For example, the first attachment site is modified from the polypeptide so that through a linker peptide including SG, GS, SGG, GGS and SGSG, the polypeptide is conjugated with the antigen.
When the polypeptide are chemically conjugated with the antigen, the first attachment site and the second attachment site may be linked through a chemical cross-linker which is a chemical compound.
Examples of the cross-linker include, but are not limited to, SMPH, Sulfo-MBS, SulfoEMCS, Sulfo-GMBS, Sulfo-SIAB, Sulfo-SMPB, Sulfo-SMCC, SVSB, SIA and other cross-linkers available from the Pierce Chemical Company.
In one embodiment, the particle provided by the présent invention comprises a polypeptide linked to an antigen, wherein spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30Â or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom.
The antigen used for the présent invention can be designed by a person skilled in the art. For example, the antigen used for the présent invention may be a naturally occurring protein or a fragment thereof. Altematively, the antigen used for the présent invention may be a protein modified from a naturally occurring protein or a fragment thereof. A person skilled in the art can design the antigen so that spatial distance between the N-terminal residue and Cterminal residue of the antigen is 30Â or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom. For example, the antigen used for the particle provided by the présent invention can be designed using a free software including PyMOL (e.g. PyMOL v0.99: http:/www.pymol.org). In one embodiment, the spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30Â (angstrom) or less, 20Â or less, or 10Â or less (e.g. from 5 A to 15 A , from 5 A to 12 A , from 5 A to 11 A , from 5 A to 10 A , from 5 A to 8 A , from 8 A to 15 A , from 8 A to 13 Â , from 8 Â to 12 Â , from 8 A to 11 A , from 9 A to 12 A , from 9 A to 11 A , from 9 A to 10Aorfrom 10A to 11 A).
Chikungunya virus like particle or a Venezuelan equine encephalitis virus like particle
In one embodiment, the présent invention provides a Chikungunya virus like particle or a Venezuelan equine encephalitis virus like particle comprising a Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and at least one antigen, wherein said Chikungunya virus structural polypeptide or said Venezuelan equine encephalitis virus structural polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and said at least one antigen are linked through said at least one first and said at least one second attachment site.
In one embodiment, a spatial distance between the N-terminal residue and C-terminal residue of the antigen may be 30 Â or less; 25 Â or less; 20 A or less; 15 Â or less; 14 A or less; 13 A or less; 12 A or less; 11 A or less; 10 Â or less; 9 Â or less; or 8 A or less (e.g. from 5 A to 15 A , from 5 A to 12 A , from 5 A to 11 A , from 5 A to 10 A , from 5 A to 8 A , from 8 A to 15 A , from 8 Â to 13 Â , from 8 Â to 12 A , from 8 A to 11 Â , from 9 A to 12 A , from 9 A to 11 Â , from 9 A to 11 A or from 10 Â to 11 A ) when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom.
In one embodiment, the antigen is linked to the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide by way of chemical cross-linking or as a fusion protein produced by way of genetic engineering.
A Chikungunya or Venezuelan equine encephalitis virus structural polypeptide used in the présent invention may comprise a Chikungunya or Venezuelan equine encephalitis virus envelope protein and/or a capsid.
Examples of Chikungunya virus include, but are not limited to, strains of 37997 and LR2006 OPY-1.
Examples of Venezuelan equine encephalitis virus include, but are not limited to, TC83.
Chikungunya or Venezuelan equine encephalitis virus structural polypeptide used in the présent invention may naturally occurring virus structural polypeptide or modîfied polypeptide thereof. The modîfied polypeptide may be a fragment of the naturally occurring virus structural polypeptide. In one embodiment, the modîfied polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring viral capsid and/or envelope protein. In one embodiment, the modîfied polypeptide is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a naturally occurring viral capsid and/or envelope protein.^For example, K64A or K64N mutatation may be introduced into a capsid of Venezuelan equine encephalitis virus structural polypeptide used in the présent invention.
Chikungunya or Venezuelan equine encephalitis virus envelope protein may comprise at least one selected from the group consisting of E3, E2, 6K and El.
Examples of Chikungunya virus structural polypeptide include, but are not limited to, E3-E2-6K-E1 of Chikungunya virus Strain 37997, Capsid-E3-E2-6K-E1 of Chikungunya virus Strain 37997, E3-E2-6K-E1 of Chikungunya virus Strain LR2006 OPY-1 and Capsid-E3-E2-6KE1 of Chikungunya virus LR2006 OPY-1.
Examples of Venezuelan equine encephalitis virus structural polypeptide include, but are not limited to, E3-E2-6K-E1 of Venezuelan equine encephalitis virus Strain TC-83 and Capsid-E3-E2-6K-E1 of Venezuelan equine encephalitis virus Strain TC-83.
An exemplary Chikungunya virus structural polypeptide sequence is provided at Genbank Accession No. ABX40006.1, which is described below (SEQ ID No.:1):
mefiptqtfynrryqprpwtprptiqvirprprpqrqagqlaqlisavnkltmravpqq kprrnrknkkqkqkqqapqnntnqkkqppkkkpaqkkkkpgrre rmcmk iendc i f e vk hegkvtgyaclvgdkvmkpahvkgtidnadlaklafkrsskydlecaqipvhmksdask fthekpegyynwhhgavqysggrftiptgagkpgdsgrpifdnkgrwaivlgganega rtalswtwnkdivtkitpegaeewslaipvmcllanttfpcsqppctpccyekepeet lrmlednvmrpgyyqllqasltcsphrqrrstkdnfnvykatrpylahcpdcgeghsch spvalerirneatdgtlkiqvslqigiktddshdwtklrymdnhmpadaeraglfvrts apctitgtmghfilarcpkgetltvgftdsrkishscthpfhhdppvigrekfhsrpqh gkelpcstyvqstaatteeievhmppdtpdrtlmsqqsgnvkitvngqtvrykcncggs negltttdkvinnckvdqchaavtnhkkwqynsplvprnaelgdrkgkihipfplanvt crvpkarnptvtygknqvimllypdhptllsyrnmgeepnyqeewvmhkkewltvpte gl e vtwgnnepykywpql s tngt ahghphe i i lyyye lyptmt vwvsvat fil 1 smvg maagmcmcarrrcitpyeltpgatvpfllsliccirtakaatyqeaaiylwneqqplfw Iqaliplaalivlcnclrllpcccktlaflavmsvgahtvsayehvtvipntvgvpykt lvnrpgyspmvlemellsvtleptlsldyitceyktvipspyvkccgtaeckdknlpdy sckvftgvypfmwggaycfcdaentqlseahveksescktefasayrahtasasaklrv lyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkiwykgdvynmdyppfga grpgqfgdiqsrtpeskdvyantqlvlqrpavgtvhvpysqapsgfkywlkergaslqh tapfgcqiatnpvravncavgnmpisidipeaaftrwdapsltdmscevpacthssdf ggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfstalasaefrvqvcs tqvhcaaechppkdhivnypashttlgvqdisatamswvqkitggvglwavaaliliv vlcvsfsrh
Another exemplary Chikungunya virus structural polypeptide sequence is provided at
Genbank Accession No. ABX40011.1, which is described below (SEQ ID No.:2):
mefiptqtfynrryqprpwaprptiqvirprprpqrqagqlaqlisavnkltmravpqq kprrnrknkkqrqkkqapqndpkqkkqppqkkpaqkkkkpgrrermcmkiendcifevk hegkvmgyaclvgdkvmkpahvkgtidnadlaklafkrsskydlecaqipvhmksdask f thekpegyynwhhgavqysggrf tiptgagkpgdsgrpif dnkgrwaivlgganega rtalswtwnkdivtkitpegaeewslalpvlcllanttfpcsqppctpccyekepest lrmlednvmrpgyyqllkasltcsphrqrrstkdnfnvykatrpylahcpdcgeghsch spialerirneatdgtlkiqvslqigiktddshdwtklrymdshtpadaeragllvrts apctitgtmghfilarcpkgetltvgftdsrkishtcthpfhheppvigrerfhsrpqh gkelpc s tyvqs t aat aee i evhmppdtpdrtlmtqqs gnvk i tvngqtvrykcncggs negltttdkvinnckidqchaavtnhknwqynsplvprnaelgdrkgkihipfplanvt crvpkarnptvtygknqvtmllypdhpt11syrnmgqepnyheewvthkkevt1tvpte glevtwgnnepykywpqmstngtahghphe i i lyyye lyptmtwi vs vas f vl 1 smvg tavgmcvcarrrcitpyeltpgatvpfllsllccvrttkaatyyeaaaylwneqqplfw lqaliplaalivlcnclkllpcccktlaflavmsigahtvsayehvtvipntvgvpykt lvnrpgyspmvlemelqsvtleptlsldyitceyktvipspyvkccgtaeckdkslpdy sckvftgvypfmwggaycfcdaentqlseahveksescktefasayrahtasasaklrv lyqgnni t vaayangdhavt vkdak f wgpms s awtp f dnk i wykgdvynmdypp f ga grpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgfkywlkergaslqh tapfgcqiatnpvravncavgnipisidipdaaf trwdapsvtdmscevpacthssdf ggvaiikytaskkgkcavhsmtnavtireadvevegnsqlqisfstalasaefrvqvcs tqvhcaaachppkdhivnypashttlgvqdisttamswvqkitggvglivavaaliliv vlcvsfsrh.
An exemplary Venezuelan equine encephalitis virus structural polypeptide is provided at Genbank Accession No. L01443.1 (http://www.ncbi.nlm.nih.gOv/nuccore/L01443.1), which is described below (SEQ ID No.:3):
mfpfqpmypmqpmpyrnpfaaprrpwfprtdpflamqvqeltrsmanltfkqrrdappe gpsaakpkkeasqkqkgggqgkkkknqgkkkaktgppnpkaqngnkkktnkkpgkrqrm vmklesdktfpimlegkingyacwggklf rpmhvegkidndvlaalktkkaskydley advpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgr waivlggvnegsrtalswmwnekgvtvkytpenceqwslvttmcllanvtfpcaqpp icydrkpaetlamlsvnvdnpgydelleaavkcpgrkrrsteelfneykltrpymarci rcavgschspiaieavksdghdgyvrlqtssqygldssgnlkgrtmrydmhgtikeipl hqvslyt s rpchivdghgyf11arcpagds i tme fkkdsvrhs c svpyevk fnpvgre1 ythppehgveqacqvyahdaqnrgayvemhlpgsevdsslvslsgssvtvtppdgtsal vececggtkisetinktkqfsqctkkeqcrayrlqndkwvynsdklpkaagatlkgklh vpflladgkctvplapepmitfgfrsvslklhpknptylitrqladephythelisepa vrnftvtekgwefvwgnhppkrfwaqetapgnphglphevithyyhrypmstilglsic aaiatvsvaastwlfcrsrvacltpyrltpnaripfclavlccartaraettwesldhl wnnnqqmfwiqlliplaaliwtrllrcvccwpf lvmagaagagayehattmpsqagi syntivnragyaplpisitptkikliptvnleyvtchyktgmdspaikccgsqectpty rpdeqckvftgvypfmwggaycfcdtentqvskayvmksddcladhaeaykahtasvqa f1nitvgehsivttvyvngetpvnfngvkitagp1stawtpfdrkivqyageiynydfp eygagqpgafgdiqsrtvsssdlyantnlvlqrpkagaihvpytqapsgfeqwkkdkap slkftapfgceiytnpiraencavgsiplafdipdalftrvsetptlsaaectlnecvy ssdfggiatvkysasksgkcavhvpsgtatlkeaavelteqgsatihfstanihpefrl qictsyvtckgdchppkdhivthpqyhaqtftaavsktawtwltsllggsaviiiiglv lativamyvltnqkhn.
In one embodiment, a first attachaient site comprises an amino group, preferably an amino group of a lysine residue. In one embodiment, the second attachaient site comprises sulfhydryl group, preferably, a sulfhydryl group of a cysteine.
In one embodiment, a conjugation of more than two substances (e.g. antigen and
Chikungunya or Venezuelan equine encephalitis virus structural polypeptide) through a first attachment site or a second attachment site is achieved using chemical cross linker. Examples of the cross-linker include, but are not limited to, SMPH, Sulfo-MBS, Sulfo-EMCS, Sulfo-GMBS, Sulfo-SIAB, Sulfo-SMPB, Sulfo-SMCC, SVSB, SIA and other cross-linkers available from the 10 Pierce Chemical Company.
According to the présent invention, a Chikungunya or Venezuelan equine encephalitis virus like particle comprising a Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and an antigen, wherein said Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and said antigen are expressed as a fusion protein can be provided.
In one embodiment, the antigen can be fused with any site of the Chikungunya or
Venezuelan equine encephalitis virus structural polypeptide. For example, the antigen may be directly or indirectly linked to N- or C- terminal of the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide (e.g. capsid, E3, E2, 6K or E1), or the antigen may be inserted into Chikungunya or Venezuelan equine encephalitis virus structural protein (e.g. capsid, E3, E2, 6K, orE1).
In one embodiment, at least one antigen is inserted into E2 of Chikungunya or Venezuelan equine encephalitis virus structural protein. For example, regarding Chikungunya virus structural protein, at least one antigen is inserted between residues 519 and 520 of SEQ ID Nos.1 or 2 (i.e. between G at 519-position and Q at 520-position of SEQ ID Nos.1 or 2); between residues 530 and 531 of SEQ ID Nos.1 or 2 (i.e. between G at 530-position and S at 531-position of SEQ ID Nos.1 or 2); between residues 531 and 532 of SEQ ID Nos.1 or 2 (i.e. between S at 531-position and N at 532-position of SEQ ID Nos.1 or 2); between residues 529 and 530 of SEQ ID Nos.1 or 2(i.e. between G at 529-position and G at 530-position of SEQ ID Nos.1 or 2); or between residues 510 and 511 of SEQ ID Nos.1 or 2(i.e. between S at 510position and G at 511-position of SEQ ID Nos.1 or 2); or between residues 511 and 512 of SEQ ID Nos.1 or 2(i.e. between G at 511-position and N at 512-position of SEQ ID Nos.1 or 2); or between residues 509 and 510 of SEQ ID Nos.1 or 2(i.e. between Q at 509-position and S at 510-position of SEQ ID Nos.1 or 2).
For example, regarding Venezuelan equine encephalitis virus structural protein, at least one antigen is inserted between residues 517 and 518 of SEQ ID No.3 (i.e. between G at 517-position and S at 518-position of SEQ ID No.3); between residues 518 and 519 of SEQ ID No.3 (i.e. between S at 518-position and S at 519-position of SEQ ID No.3); between residues 519 and 520 of SEQ ID No.3 (i.e. between S at 519-position and V at 520-position of SEQ ID No.3); between residues 515 and 516 of SEQ ID No.3(i.e. between L at 515-position and S at 516-position of SEQ ID No.3); between residues 516 and 517 of SEQ ID No.3(i.e. between S at 516-position and G at 517-position of SEQ ID No.3); between residues 536 and 537 of SEQ ID No.3(i.e. between C at 536-position and G at 537-position of SEQ ID No.3) ; between residues 537 and 538 of SEQ ID No.3(i.e. between G at 537-position and G at 538-position of SEQ ID
No.3) ; between residues 538 and 539 of SEQ ID No.3(i.e. between G at 538-position and T at 539-position of SEQ ID No.3).
The fusion protein may be expressed using a conventional technique in the art. A variety of expression Systems can be used for the expression of the fusion protein. For example, the fusion protein can be expressed in 293 cells, Sf9 cells or E.coli.
In one embodîment, antigen is a substance (e.g. protein) which is not derived from Chikungunya or Venezuelan equine encephalitis virus. Antigen may be at least one selected from the group consisting of self antigens and cancer antigens. For example, antigen is a polypeptide derived from TNF-α, CD20 or CTLA4. Thus, examples of combinations of the polypeptide and the antigen used for the présent invention include, but are not limited to, i) a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide derived from TNF-a;
ii) a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide derived from CD20;
iii) a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from TNF-α; or iv) a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from CD20
v) a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from CTLA4.
A polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be a naturally occurring viral polypeptide or modified polypeptide thereof. In addition, a polypeptide derived from TNF-α, CD20 or CTLA4 may be a naturally occurring polypeptide or modified polypeptide of the naturally occurring polypeptide or a fragment of the naturally occurring polypeptide or the modified peptide. The modified polypeptide may be a fragment of the naturally occurring virus structural polypeptide.
In one embodîment, the modified polypeptide derived from TNF-α, CD20 or CTLA4 has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring polypeptide. In one embodiment, the modified peptide derived from TNF-a, CD20 or CTLA4 is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a naturally occurring polypeptide derived from TNF-α ,CD20 or CTLA4.
When a polypeptide derived from a virus is conjugated with a polypeptide derived from an antigen, a linker peptide including SG, GS, SGG, GGS SGSG and TRGGS may be used. Examples of conjugation of the polypeptide derived from a virus (referred to as “PFV” below) with the polypeptide derived from the antigen (referred to as “PFA” below) include, but not limited to: PFV-SG-PFA-GS-PFV; PFV-SG-PFA-GGS-PFV; PFV-SSG-PFA-GS-PFV; PFVSGG-PFA-GGS-PFV;
PFV-SGSG-PFA-GS-PFV; and PFA-SGG-PFA-TRGGS-PFV.
In one embodiment, the présent invention provides a virus like particle comprising
i) a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide derived from TNF-α, which consists of an amino acid sequence represented by SEQ ID No.4;
ii) a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide derived from CD20, which consists of an amino acid sequence represented by SEQ ID No.5;
iii) a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from TNF-α, which consists of an amino acid sequence represented by SEQ ID No.6; or iv) a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from CD20, which consists of an amino acid sequence represented by SEQ ID No.7;
v) a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from CTLA4, which consists of an amino acid sequence represented by SEQ IDNo.8.
In one embodiment, the présent invention provides a virus like particle comprising a fusion protein which is modified from the fusion protein having an amino acid sequence represented by any one of SEQ ID Nos.4-8. The modified fusion protein may hâve at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the fusion protein having an amino acid sequence represented by any one of SEQ ID Nos.4-8. Also, the modified fusion protein may be a mutant where at most 10% of the amino acids are deleted, substîtuted, and/or added based on the fusion protein having an amino acid sequence represented by any one of SEQ ID Nos.4-8.
(2) Nucléotide, Vector, Host cell
In the second aspect, the présent invention provides a nucleic acid molécule comprising a nucléotide sequence that encodes a particle as provided in the first aspect of the présent invention.
In one embodiment, the présent invention provides a nucleic acid molécule comprising a nucléotide sequence that encodes the Chikungunya or Venezuelan equine encephalitis virus like particle as described above.
Examples of the nucléotide sequence that encodes the Chikungunya or Venezuelan equine encephalitis virus like particle include, but are not limited to, a nucléotide sequence encoding E3-E2-6K-E1 of Chikungunya virus Strain 37997, a nucléotide sequence encoding Capsid-E3-E2-6K-E1 of Chikungunya virus Strain 37997, a nucléotide sequence encoding E3E2-6K-E1 of Chikungunya virus Strain LR2006 OPY-1, a nucléotide sequence encoding Capsid-E3-E2-6K-E1 of Chikungunya virus LR2006 OPY-1, a nucléotide sequence encoding E3-E2-6K-E1 of Venezuelan equine encephalitis virus Strain TC-83 and a nucléotide sequence encoding Capsid-E3-E2-6K-E1 of Venezuelan equine encephalitis virus TC-83.
Regarding Chikungunya virus, an exemplary nucléotide sequence that encodes E3E2-6K-E1 is described below (SEQ ID No.:9):
Atgagcclcgçcctcccggtcttgtgcctgitggcaaacactacaticccctgctctcagccgccttgcacaccctgctgctacgaaaaggaaccgg aaagcaccttgcgcatgcttgaggacaacgtgatgagacccggatactaccagctactaaaagcatcgctgacttgctctccccaccgccaaagac gcagtactaaggacaattttaatgtctataaagccacaagaccatatctagctcattgtcctgactgcggagaagggcaucgtgccacagccciatc gcattggagcgcatcagaaatgaagcaacggacggaacgctgaaaatccaggtctctttgcagatcgggataaagacagatgacagccacgattg gaccaagctgcgctatatggatagccatacgccagcggacgcggagcgagccggattgcttgtaaggacttcagcaccgtgcacgatcaccggg accatgggacactttattctcgcccgatgcccgaaaggagagacgctgacagtgggatttacggacagcagaaagatcagccacacatgcacaca cccgHccatcatgaaccacctgtgataggtagggagaggttccactctcgaccacaacatggtaaagagttaccttgcagcacgtacgtgcagag caccgctgccactgctgaggagatagaggtgcatatgcccccagatactcctgaccgcacgctgatgacgcagcagtctggcaacgtgaagatca cagttaatgggcagacggtgcggtacaagtgcaactgcggtggctcaaacgagggactgacaaccacagacaaagtgalcaataactgcaaaatt gatcagtgccatgctgcagtcactaatcacaagaanggcaatacaactcccctttagtcccgcgcaacgctgaactcggggaccgtaaaggaaag atccacatcccaltcccattggcaaacgtgacttgcagagtgccaaaagcaagaaaccctacagtaacttacggaaaaaaccaagtcaccatgctg ctgtatcctgaccatccgacactcttgtcttaccgtaacatgggacaggaaccaaattaccacgaggagtgggtgacacacaagaaggaggttacct tgaccgtgcctactgagggtctggaggtcacttggggcaacaacgaaccatacaagtactggccgcagatgtctacgaacggtactgctcatggtc acccacatgagataatcttgtactattatgagctgtaccccactatgactgtagtcattgtgtcggtggcctcgttcgtgcttctgtcgatggtgggcaca gcagtgggaatgtgtgtgtgcgcacggcgcagatgcattacaccatatgaattaacaccaggagccactgttcccitcctgctcagcctgctatgctg cgtcagaacgaccaaggcggccacatattacgaggctgcggcatatctatggaacgaacagcagcccctgttctggttgcaggctcttatcccgct ggccgccttgatcgtcctgtgcaactgtctgaaactcttgccatgctgctgtaagacectggcttttltagccgtaatgagcatcggtgcccacactgtg agcgcgtacgaacacgtaacagtgatcccgaacacggtgggagtaccgtataagactcttgtcaacagaccgggttacagccccatggtgttgga galggagctacaatcagtcaccttggaaccaacactgtcacttgactacatcacgtgcgagtacaaaactgtcatcccctccccgtacgtgaagtgct gtggtacagcagagtgcaaggacaagagcctaccagactacagctgcaaggtctttactggagtclacccattlatgtggggcggcgcctactgctt ttgcgacgccgaaaatacgcaattgagcgaggcacatgtagagaaatctgaatcttgcaaaacagagtttgcatcggcctacagagcccacaccg catcggcgtcggcgaagctccgcgtcctttaccaaggaaacaacattaccgtagctgcctacgctaacggtgaccatgccgtcacagtaaaggac gccaagtttgtcgtgggcccaatgtcctccgcctggacaccttttgacaacaaaatcgtggtgtacaaaggcgacgtctacaacatggactacccac cttttggcgcaggaagaccaggacaatttggtgacattcaaagtcgtacaccggaaagtaaagacgtttatgccaacactcagttggtactacagag gccagcagcaggcacggtacatgtaccatacictcaggcaccatctggcttcaagtattggclgaaggaacgaggagcatcgctacagcacacgg caccgttcggttgccagattgcgacaaacccggtaagagctgtaaattgcgctgtggggaacataccaatttccatcgacataccggatgcggcctt tactagggttgtcgatgcaccctctgtaacggacatgtcatgcgaagtaccagcctgcactcactcctccgactttgggggcgtcgccatcatcaaat acacagctagcaagaaaggtaaatgtgcagtacattcgatgaccaacgccgttaccattcgagaagccgacgtagaagtagaggggaactccca gctgcaaatatccttctcaacagccctggcaagcgccgagtttcgcgtgcaagtgtgctccacacaagtacactgcgcagccgcatgccaccctcc aaaggaceacatagtcaattacccagcatcacacaccacccttggggtccaggatatatccacaacggcaatgtcttgggtgcagaagattacggg aggagtaggattaattgttgctgttgctgccttaattttaattgtggtgctatgcgtgtcgtttagcaggcac
Regarding Chikungunya virus, another exemplary nucléotide sequence that encodes
E3-E2-6K-E1 is described below (SEQ ID No.: 10):
Atgagtcttgccatcccagttatgtgcctgttggcaaacaccacgttcccctgctcccagcccccttgcacgccctgctgctacgaaaaggaaccgg aggaaaccctacgcatgcttgaggacaacgtcatgagacctgggtactatcagctgctacaagcatccttaacatgttctccccaccgccagcgac gcagcaccaaggacaacttcaatgtctataaagccacaagaccatacttagctcactgtcccgactgtggagaagggcactcgtgccatagtcccg lagcactagaacgcatcagaaatgaagcgacagacgggacgctgaaaatccaggtctccttgcaaatcggaataaagacggatgacagccacga ttggaccaagctgcgttatatggacaaccacatgccagcagacgcagagagggcggggctatttgtaagaacatcagcaccgtgtacgattactgg
Regarding Chikungunya virus, an exemplary nucléotide sequence that encodes a
Capsid-E3-E2-6K-E1 is described below (SEQ ID No.:11):
atggagttcatcccgacgcaaactttctataacagaaggtaccaaccccgaccctgggc cccacgccctacaattcaagtaattagacetagaccacgtccacagaggcaggctgggc aactcgcccagctgatctccgcagtcaacaaattgaccatgcgcgcggtacctcaacag aagcctcgcagaaatcggaaaaacaagaagcaaaggcagaagaagcaggcgccgcaaaa cgacccaaagcaaaagaagcaaccaccacaaaagaagccggctcaaaagaagaagaaac caggccgtagggagagaatgtgcatgaaaattgaaaatgattgcatcttcgaagtcaag catgaaggcaaagtgatgggctacgcatgcctggtgggggataaagtaatgaaaccagc acatgtgaagggaactatcgacaatgccgatctggctaaactggcctttaagcggtcgt ctaaatacgatcttgaatgtgcacagataccggtgcacatgaagtctgatgcctcgaag tttacccacgagaaacccgaggggtactataactggcatcacggagcagtgcagtattc aggaggccggttcactatcccgacgggtgcaggcaagccgggagacagcggcagaccga tcttcgacaacaaaggacgggtggtggccatcgtcctaggaggggccaacgaaggtgcc cgcacggccctctccgtggtgacgtggaacaaagacatcgtcacaaaaattacccctga gggagccgaagagtggagcctcgccctcccggtcttgtgcctgttggcaaacactacat tcccctgctctcagccgccttgcacaccctgctgctacgaaaaggaaccggaaagcacc ttgcgcatgcttgaggacaacgtgatgagacccggatactaccagctactaaaagcatc gctgacttgctctccccaccgccaaagacgcagtactaaggacaattttaatgtctata aagccacaagaccatatctagctcattgtcctgactgcggagaagggcattcgtgccac agccctatcgcattggagcgcatcagaaatgaagcaacggacggaacgctgaaaatcca ggtctctttgcagatcgggataaagacagatgacagccacgattggaccaagctgcgct atatggatagccatacgccagcggacgcggagcgagccggattgcttgtaaggacttca gcaccgtgcacgatcaccgggaccatgggacactttattctcgcccgatgcccgaaagg agagacgctgacagtgggatttacggacagcagaaagatcagccacacatgcacacacc cgttccatcatgaaccacctgtgataggtagggagaggttccactctcgaccacaacat ggtaaagagttaccttgcagcacgtacgtgcagagcaccgctgccactgctgaggagat agaggtgcatatgcccccagatactcctgaccgcacgctgatgacgcagcagtctggca acgtgaagatcacagttaatgggcagacggtgcggtacaagtgcaactgcggtggctca aacgagggactgacaaccacagacaaagtgatcaataactgcaaaattgatcagtgcca tgctgcagtcactaatcacaagaattggcaatacaactcccctttagtcccgcgcaacg ctgaactcggggaccgtaaaggaaagatccacatcccattcccattggcaaacgtgact tgcagagtgccaaaagcaagaaaccctacagtaacttacggaaaaaaccaagtcaccat gctgctgtatcctgaccatccgacactcttgtcttaccgtaacatgggacaggaaccaa attaccacgaggagtgggtgacacacaagaaggaggttaccttgaccgtgcctactgag ggtctggaggtcacttggggcaacaacgaaccatacaagtactggccgcagatgtctac gaacggtactgctcatggtcacccacatgagataatcttgtactattatgagctgtacc ccactatgactgtagtcattgtgtcggtggcctcgttcgtgcttctgtcgatggtgggc acagcagtgggaatgtgtgtgtgcgcacggcgcagatgcattacaccatatgaattaac accaggagccactgttcccttcctgctcagcctgctatgctgcgtcagaacgaccaagg cggccacatattacgaggctgcggcatatctatggaacgaacagcagcccctgttctgg ttgcaggctcttatcccgctggccgccttgatcgtcctgtgcaactgtctgaaactctt gccatgctgctgtaagaccctggcttttttagccgtaatgagcatcggtgcccacactg tgagcgcgtacgaacacgtaacagtgatcccgaacacggtgggagtaccgtataagact cttgtcaacagaccgggttacagccccatggtgttggagatggagctacaatcagtcac cttggaaccaacactgtcacttgactacatcacgtgcgagtacaaaactgtcatcccct ccccgtacgtgaagtgctgtggtacagcagagtgcaaggacaagagcctaccagactac agctgcaaggtctttactggagtctacccatttatgtggggcggcgcctactgcttttg cgacgccgaaaatacgcaattgagcgaggcacatgtagagaaatctgaatcttgcaaaa cagagtttgcatcggcctacagagcccacaccgcatcggcgtcggcgaagctccgcgtc ctttaccaaggaaacaacattaccgtagctgcctacgctaacggtgaccatgccgtcac agtaaaggacgccaagtttgtcgtgggcccaatgtcctccgcctggacaccttttgaca acaaaatcgtggtgtacaaaggcgacgtctacaacatggactacccaccttttggcgca ggaagaccaggacaatttggtgacattcaaagtcgtacaccggaaagtaaagacgttta tgccaacactcagttggtactacagaggccagcagcaggcacggtacatgtaccatact ctcaggcaccatctggcttcaagtattggctgaaggaacgaggagcatcgctacagcac acggcaccgttcggttgccagattgcgacaaacccggtaagagctgtaaattgcgctgt ggggaacataccaatttccatcgacataccggatgcggcctttactagggttgtcgatg caccctctgtaacggacatgtcatgcgaagtaccagcctgcactcactcctccgacttt gggggcgtcgccatcatcaaatacacagctagcaagaaaggtaaatgtgcagtacattc gatgaccaacgccgttaccattcgagaagccgacgtagaagtagaggggaactcccagc tgcaaatatccttctcaacagccctggcaagcgccgagtttcgcgtgcaagtgtgctcc acacaagtacactgcgcagccgcatgccaccctccaaaggaccacatagtcaattaccc agcatcacacaccacccttggggtccaggatatatccacaacggcaatgtcttgggtgc agaagattacgggaggagtaggattaattgttgctgttgctgccttaattttaattgtg gtgctatgcgtgtcgtttagcaggcactaa.
Regarding Chikungunya virus, another exemplary nucléotide sequence that encodes a
Capsid-E3-E2-6K-E1 is described below (SEQ ID No.:12):
atggagttcatcccaacccaaactttttacaataggaggtaccagcctcgaccctggac tccgcgccctactatccaagtcatcaggcccagaccgcgccctcagaggcaagctgggc aacttgcccagctgatctcagcagttaataaactgacaatgcgcgcggtaccacaacag aagccacgcaggaatcggaagaataagaagcaaaagcaaaaacaacaggcgccacaaaa caacacaaatcaaaagaagcagccacctaaaaagaaaccggctcaaaagaaaaagaagc cgggccgcagagagaggatgtgcatgaaaatcgaaaatgattgtattttcgaagtcaag cacgaaggtaaggtaacaggttacgcgtgcctggtgggggacaaagtaatgaaaccagc acacgtaaaggggaccatcgataacgcggacctggccaaactggcctttaagcggtcat ctaagtatgaccttgaatgcgcgcagatacccgtgcacatgaagtccgacgcttcgaag ttcacccatgagaaaccggaggggtactacaactggcaccacggagcagtacagtactc aggaggccggttcaccatccctacaggtgctggcaaaccaggggacagcggcagaccga tcttcgacaacaagggacgcgtggtggccatagtcttaggaggagctaatgaaggagcc cgtacagccctctcggtggtgacctggaataaagacattgtcactaaaatcacccccga gggggccgaagagtggagtcttgccatcccagttatgtgcctgttggcaaacaccacgt tcccctgctcccagcccccttgcacgccctgctgctacgaaaaggaaccggaggaaacc ctacgcatgcttgaggacaacgtcatgagacctgggtactatcagctgctacaagcatc cttaacatgttctccccaccgccagcgacgcagcaccaaggacaacttcaatgtctata aagccacaagaccatacttagctcactgtcccgactgtggagaagggcactcgtgccat agtcccgtagcactagaacgcatcagaaatgaagcgacagacgggacgctgaaaatcca ggtctccttgcaaatcggaataaagacggatgacagccacgattggaccaagctgcgtt atatggacaaccacatgccagcagacgcagagagggcggggctatttgtaagaacatca gcaccgtgtacgattactggaacaatgggacacttcatcctggcccgatgtccaaaagg ggaaactctgacggtgggattcactgacagtaggaagattagtcactcatgtacgcacc catttcaccacgaccctcctgtgataggtcgggaaaaattccattcccgaccgcagcac ggtaaagagctaccttgcagcacgtacgtgcagagcaccgccgcaactaccgaggagat agaggtacacatgcccccagacacccctgatcgcacattaatgtcacaacagtccggca acgtaaagatcacagtcaatggccagacggtgcggtacaagtgtaattgcggtggctca aatgaaggactaacaactacagacaaagtgattaataactgcaaggttgatcaatgtca tgccgcggtcaccaatcacaaaaagtggcagtataactcccctctggtcccgcgtaatg ctgaacttggggaccgaaaaggaaaaattcacatcccgtttccgctggcaaatgtaaca tgcagggtgcctaaagcaaggaaccccaccgtgacgtacgggaaaaaccaagtcatcat gctactgtatcctgaccacccaacactcctgtcctaccggaatatgggagaagaaccaa actatcaagaagagtgggtgatgcataagaaggaagtcgtgctaaccgtgccgactgaa gggctcgaggtcacgtggggcaacaacgagccgtataagtattggccgcagttatctac aaacggtacagcccatggccacccgcatgagataattctgtattattatgagctgtacc ccactatgactgtagtagttgtgtcagtggccacgttcatactcctgtcgatggtgggt atggcagcggggatgtgcatgtgtgcacgacgcagatgcatcacaccgtatgaactgac accaggagctaccgtccctttcctgcttagcctaatatgctgcatcagaacagctaaag cggccacataccaagaggctgcgatatacctgtggaacgagcagcaacctttgttttgg ctacaagcccttattccgctggcagccctgattgttctatgcaactgtctgagactctt accatgctgctgtaaaacgttggcttttttagccgtaatgagcgtcggtgcccacactg tgagcgcgtacgaacacgtaacagtgatcccgaacacggtgggagtaccgtataagact ctagtcaatagacctggctacagccccatggtattggagatggaactactgtcagtcac tttggagccaacactatcgcttgattacatcacgtgcgagtacaaaaccgtcatcccgt ctccgtacgtgaagtgctgcggtacagcagagtgcaaggacaaaaacctacctgactac agctgtaaggtcttcaccggcgtctacccatttatgtggggcggcgcctactgcttctg cgacgctgaaaacacgcagttgagcgaagcacacgtggagaagtccgaatcatgcaaaa cagaatttgcatcagcatacagggctcataccgcatctgcatcagctaagctccgcgtc ctttaccaaggaaataacatcactgtaactgcctatgcaaacggcgaccatgccgtcac agttaaggacgccaaattcattgtggggccaatgtcttcagcctggacacctttcgaca acaaaattgtggtgtacaaaggtgacgtctataacatggactacccgccctttggcgca ggaagaccaggacaatttggcgatatccaaagtcgcacacctgagagtaaagacgtcta tgctaatacacaactggtactgcagagaccggctgtgggtacggtacacgtgccatact ctcaggcaccatctggctttaagtattggctaaaagaacgcggggcgtcgctgcagcac acagcaccatttggctgccaaatagcaacaaacccggtaagagcggtgaactgcgccgt agggaacatgcccatctccatcgacataccggaagcggccttcactagggtcgtcgacg cgccctctttaacggacatgtcgtgcgaggtaccagcctgcacccattcctcagacttt gggggcgtcgccattattaaatatgcagccagcaagaaaggcaagtgtgcggtgcattc gatgactaacgccgtcactattcgggaagctgagatagaagttgaagggaattctcagc tgcaaatctctttctcgacggccttagccagcgccgaattccgcgtacaagtctgttct acacaagtacactgtgcagccgagtgccaccccccgaaggaccacatagtcaactaccc ggcgtcacataccaccctcggggtccaggacatctccgctacggcgatgtcatgggtgc agaagatcacgggaggtgtgggactggttgttgctgttgccgcactgattctaatcgtg gtgctatgcgtgtcgttcagcaggcactaa.
In one embodiment, the présent invention provides a vector comprising the nucleic acid molécule as described above, wherein the vector optionally comprises an expression control sequence operably linked to the nucleic acid molécule.
Examples of an expression control sequence include, but are not limited to, promoter such as CMV promoter, phage lambda PL promoter, the E. coli lac, phoA and tac promoters, the SV40 early and late promoters, and promoters of retroviral LTRs.
The expression vectors can be prepared by a person skilled in the art based on
WO/2012/006180, the entire contents of which are incorporated by reference herein.
Examples of vectors which can be used for expressing a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide of antigen include a vector shown in VLP_CHI 512 vector (SEQ ID No.:23) containing CHIKV VLP polynucleotide (SEQ ID No. 28; corresponding amino acid sequence represented by SEQ ID No.:29); and VLP_CHI 532 vector (SEQ ID No.: 24) containing CHIKV VLP polynucleotide (SEQ ID No. 30; corresponding amino acid sequence represented by SEQ ID No.:31).
The expression vectors can be prepared by a person skilled in the art based on
US2012/0003266, the entire contents of which are incorporated by reference herein.
Examples of vectors which can be used for expressing a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide of antigen include a vector shown in VLP_VEEV VLP 518 vector (SEQ ID No.:25) containing VEEV VLP polynucleotide (SEQ ID No. 32; corresponding amino acid sequence represented by SEQ ID
No.:33); VLP_VEEV VLP 519 vector (SEQ ID No.26) containîng VEEV VLP polynucleotide (SEQ ID No. 34; corresponding amino acid sequence represented by SEQ ID No.:35); and VLP_VEEV VLP 538 vector (SEQ ID No.: 27) containîng VEEV VLP polynucleotide (SEQ ID No. 36; corresponding amino acid sequence represented by SEQ ID No.:37).
In one embodiment, the présent invention provides
i) a nucleic acid molécule encoding a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide derived from TNF-α, which consists of a nucléotide sequence represented by SEQ ID No. 13;
ii) a nucleic acid molécule encoding a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide derived from CD20, which consists of a nucléotide sequence represented by SEQ ID No. 14;
iii) a nucleic acid molécule encoding a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from TNF-α, which consists of a nucléotide sequence represented by SEQ ID No.15;
iv) a nucleic acid molécule encoding a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from CD20, which consists of a nucléotide sequence represented by SEQ ID No.16; or
v) a nucleic acid molécule encoding a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from CTLA4, which consists of a nucléotide sequence represented by SEQ ID No.17.
In one embodiment, the présent invention provides a nucleic acid molécule which is modified from the nucleic acid molécule having a nucléotide sequence represented by any one of SEQ ID Nos.13-17. The modified nucleic acid molécule may hâve at least 70%, 75%, 80%, 85%, 90%, 95% or 98% nucléotide sequence identity to the nucleic acid molécule having a nucléotide sequence represented by any one of SEQ ID Nos.13-17. Also, the modified nucleic acid molécule may be a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on the nucleic acid molécule having a nudeotide sequence represented by any one of SEQ ID Nos. 13-17.
(3) Composition
In the third aspect, the présent invention provides a composition comprising the particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention.
In one embodiment, the présent invention provides a composition comprising the Chikungunya or Venezuelan equine encephalitis virus like particle as described above or the nucleic acid molécule as described above.
The composition may further comprise a pharmaceutical acceptable carrier and/or adjuvant. Examples of adjuvant include, but are not limited to Ribi solution (Sigma Adjuvant system, Sigma-Aldrich).
The pharmaceutical composition of the présent invention may contaîn a single active ingrédient or a combination of two or more active ingrédients, as far as they are not contrary to the objects of the présent invention. For example, cytokines including chemokines, anti-body of cytokines such as anti TNF antibody (e.g. infliximab, adalimumab), anti-VEGF antibody (e.g. bevacizumab and ranibizumab), cytokine receptor antagonist such as anti HER2 antibody (e.g. Trastuzumab), anti EGF receptor antibody (e.g. Cetuximab), anti VEGF aptamer (e.g. Pegaptanib) and immunomodulator such as cyclosporine, tacrolimus, ubenimex may be used for the combination therapy.
In a combination of plural active ingrédients, their respective contents may be suitably increased or decreased in considération of their therapeutic effects and safety.
The term “combination used herein means two or more active ingrédient are administered to a patient simultaneously in the form of a single entity or dosage, or are both administered to a patient as separate entities either simultaneously or sequentially with no spécifie time limits, wherein such administration provides therapeutically effective levels of the two components in the body, preferably at the same time.
In one embodiment, the composition is a vaccine composition including a DNA vaccine. In one embodiment, the DNA vaccine provided by the présent invention comprises CpG containing oligonucleotide.
(4) Method of producinq an antibody, Method of immunomodulation, Method of treating an autoimmune disease, Method of inducing and/or enhancinq immune response against an antigen in a mammal, Method of treating cancer, Method of passive immunization, Method of presenting an antigen on macrophage, and Method for producing a particle
In the fourth aspect, the présent invention provides a method of producing an antibody, comprising contacting the particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention to a mammal.
The antibody produced in the fourth aspect of the présent invention may be humanized using a conventional technique. Thus, in one embodiment, the method provided in the fourth aspect of the invention further comprises a step of humanizing non-human mammal produced antibody.
The particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention may be administered directly into the patient, into the affected organ or systemically, or applied ex vivo to cells derived from the patient or a human cell line which are subsequently administered to the patient, or used in vitro to select a subpopulation from immune cells such as B-cell and T-cell derived from the patient, which are then re-administered to the patient.
According to the présent invention, the virus like particle can be applied for the immune therapy.
In the fifth aspect, the présent invention provides a method of immunomodulation, a method of treating an autoimmune disease, a method of inducing and/or enhancing immune response against an antigen in a mammal, and a method of treating cancer comprising administering the composition provided in the third aspect of the présent invention to a mammal.
In sixth aspect, the présent invention provides a method of passive immunization, comprising administering the antibody provided in the fourth aspect of the présent invention to a mammal.
In seventh aspect, the présent invention provides a method of presenting an antigen on macrophage, comprising contacting the particle provided in the first aspect of the présent invention and/or the nucleic acid molécule provided in the second aspect of the présent invention to a mammal.
In eighth aspect, the présent invention provides a method for producing the particle provided in the first aspect of the présent invention, comprising preparing a gene comprising a nucléotide sequence encoding said particle; culturing a cell which is transfected with said gene to express said particle; and recovering said particle.
In one embodiment, the présent invention provides a method of producing an antibody, comprising contacting the Chikungunya or Venezuelan equine encephalitis virus like particle as described above and/or the nucleic acid molécule as described above to a mammal. The produced antibody may be an antibody which can specifically bind to the antigen comprised in the Chikungunya or Venezuelan equine encephalitis virus like particle or the antigen encoded by the nucleic acid molécule. The method of producing an antibody provided by the présent invention may be a useful method for producing a monoclonal or polyclonal antibody against an antigen (e.g. TNFa, CD20 and CLTA4).
In one embodiment, the antibody obtained by the method of producing an antibody according to the présent invention is used for passive immunization. The method of passive immunization may comprise administering the obtained antibody to a mammal.
According to the présent invention, the composition of the présent invention is useful for immunomodulation. Especially said immunomodulation is for the treatment of autoimmune disease, neural disease, inflammatory disease such as inflammatory lung disease, including the acute respiratory distress syndrome, chronic obstructive pulmonary disease and asthma, angiogenesis associated diseases including neoplasm.
In one preferred embodîment, the immunomodulation provided by the présent invention is inducing and/or enhancing immune response against an antigen in a mammal. Thus, in one embodîment, the présent invention provides a method of inducing and/or enhancing immune response against an antigen in a mammal, comprising administering an effective amount of the composition as described above to the mammal. Examples of mammal include, but are not limited to, a human.
Since many antibodies are useful for the treatment of disease, the method and the composition which are provided by the présent invention can be useful for the treatment of diseases. For example, an antibody which specifically binds the target as listed in Table 1 or an antibody which binds an epitope on the target as listed in Table 1 is useful for the treatment of the disease as listed in Table 1.
In one embodîment, at least one antigen which is used for the présent invention is at least one target as listed in Table 1. When at least one antigen which is used for the présent invention is at least one target as listed in Table 1, the particle, the isolated nucleic acid, the vector, the composition and the method provided by the présent invention can be useful for the treatment of the disease or the condition as listed in Table 1 (see Use of Table 1 ).
For example, when at least one antigen used for the présent invention is one or more cancer antigen, the particle, the isolated nucleic acid, the vector, the composition and the method provided by the présent invention can be useful for the treatment of cancer.
Examples of cancer antigen include, but are not limited to, VEGF, epidermal growth factor receptor, CD33, CD20 and ErbB2. When the composition of the présent invention comprising two or more cancer antigens is administered to a mammal, antibodies directed to the two or more cancer antigens can attack the cancer.
For example, when at least one antigen used for the présent invention is amyloid β, the isolated nucleic acid, the vector, the composition and the method provided by the présent invention can be useful for the treatment of Alzheimer's disease.
For example, when at least one antigen used for the présent invention is TNF alpha, the isolated nucleic acid, the vector, the composition and the method provided by the présent invention can be useful for the treatment of inflammation; auto immune disease including rheumatoid arthritis; psoriasis, Crohn's disease; ulcerative colitis etc.
For example, when at least one antigen used for the présent invention is CD20, the isolated nucleic acid, the vector, the composition and the method provided by the présent invention can be useful for the treatment of auto immune disease including rheumatoid arthritis and SLE; cancer including Non-Hodgkin lymphoma etc.
For example, when at least one antigen used for the présent invention is CTLA4, the isolated nucleic acid, the vector, the composition and the method provided by the présent invention can be useful for the treatment of cancer including melanoma; and useful for activating T cells etc.
Given the symptom of patients infected with Chikungunya or Venezuelan equine encephalitis together with unusual big molécule of Chikingunya or Venezuelan equine encephalitis, this VLP can act effectively and efficiently to target macrophage and its composition such as cytokines and immunomodulative compounds.
In one aspect, the présent invention provides a method of presenting an antigen on macrophage, comprising administering the Chikungunya or Venezuelan equine encephalitis virus like particle as described above and/or the nucleic acid molécule as described above to a mammal. The Chikungunya or Venezuelan equine encephalitis virus like particle provided by the présent invention is good to target macrophage. In one embodiment, the Chikungunya or Venezuelan equine encephalitis virus like particle provided by the présent invention is a kind of delivery System of the at least one antigen, which is comprised in the Chikungunya or Venezuelan equine encephalitis virus like particle, to macrophage.
In one embodiment, the présent invention provides a method for producing
Chikungunya or Venezuelan equine encephalitis virus like particle provided in the first aspect of the présent invention, comprising preparing a gene comprising a nucléotide sequence encoding said particle; culturing a cell which is transfected with said gene to express said particle; and recovering said particle. In this embodiment, transfection can be conducted using a conventional method. Cells using for the transfection may be 293 cells. Recovering VLP may include collecting a conditioned medium after cells are transfected with a plasmid comprising a gene, and may further include purify VLP from the conditioned medium using ultracentrifugation. In one embodiment, further step may be included in the method for producing Chikungunya or Venezuelan equine encephalitis virus like particle provided in the eighth aspect of the présent invention, where a polynucleotide encoding an antigen is designed so that spatial distance between the N-terminal residue and C-terminal residue of the antigen is 3θΑ or less (e.g. from 5 A to 15 A, from 5 A to 12 Â, from 5 A to 11 A, from 5 A to 10 A, from 5 A to 8 A, from 8 A to 15 A, from 8 Â to 13 A, from 8 A to 12 A, from 8 A to 11 A, from 9 A to 12 A, from 9 A to 11 A, from 9 A to 10 A, or from 10 A to 11 A) when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom.
Immune System evolves to recognize foreign antigens for killing pathogens such as viruses or bacteria. It also evolves not to recognize self proteins to protect self proteins. It is called immune tolérance System. Therefore it is difficult to induce antibodies against self-antigen by traditional immunization methods. To overcome the immune tolérance, we developed a novel vaccine method using a self-assembly subunit containing an self-antigen. The selfassembly subunit spontaneously assembles and forms a stable organized unit that présents highly répétitive antigens on the surface. Highly répétitive antigens immunogen strengthen signal pathways in B cells and resuit in stimulation of antibody responses than single antigen immunogen such as traditional immunization methods. Applying this mechanism to vaccine development not only increases antibody responses against target immunogens but also overcome self-antigen tolérance.
The présent invention will be described in detail with reference to the following example, which, however, is not intended to limit the scope of the présent invention.
EXAMPLES (1) Préparation of Chikungunya virus like particle comprising a virus structural polypeptide and a fragment of human TNF alpha
It was expected that a monomer of TNF alpha polypeptide fused with Chikungunya virus structural polypeptide is difficult to be stably expressed because TNF alpha is found as a trimer under natural conditions. However, use of a fusion protein, in which TNF alpha monomer peptide (a fragment of TNF alpha monomer peptide) is fused with the Chikungunya virus structural polypeptide through linkers at N- and C-terminal of TNF alpha-derived peptide for attaching TNF alpha-derived peptide to the Chikungunya virus structural polypeptide, resulted in stable expression of a Chikungunya virus like particle comprising a virus structural polypeptide and TNF alpha monomer-derived peptide.
In detail, polynucleotide encoding the original human TNF alpha was modified to préparé a polynucleotide encoding modified TNF alpha-derived peptide where RTPSD which is Nterminal sequence of the original TNF alpha-derived peptide is replaced with SGG and TRGGS is attached to C-terminal of the TNF alpha (see SEQ ID Nos.18-20 as shown in Fig.1). The resulting polynucleotide was inserted between the codons encoding G at 519-position and Q at 520-position of SEQ ID No.2 to construct a plasmid (hereinafter referred to as CHIKV-TNFa4) for expressing Chikungunya virus like particle where the modified TNF alpha-derived peptide is inserted into E2 of Chikungunya virus structural polypeptide (C-E3-E2-6K-E1). Subsequently, 293F cells (1.5x106 cells/ml) was transfected with 250pg of CHIKV-TNFa4. After culturing for 4 days, the supernatant was collected. The obtaîned supernatant was overlaid onto Opti Prep (Sigma D1556) followed by being ultracentrifuged (20000rpm, 120min) using SW28 rotor to concentrate VLP (i.e. virus like particle). The concentrated VLP was mixed with Opti Prep to form density gradient followed by ultracentrifuged (75000rpm, 4hours) using NVT100 rotor. After the ultracentrifugation, purified VLP was collected. The expression of VLP comprising TNF alpha conjugated with Chikungunya virus structural polypeptide was confirmed by Western Blot using an antibody spécifie for CHIVK (ATCC: VR-1241 AF) and an antibody spécifie for TNF alpha (Cell Signal: #6945).
The spatial distance between the N-terminal residue and C-terminal residue of the TNF alpha-derived peptide is 8.27Â when the distance is determined in a crystal of TNF alpha.
(2) Préparation of Venezuelan equine encephalitis virus like particle comprising a virus structural polypeptide and human TNF alpha-derived peptide (referred to as VEEV-TNFa VLPs)
According to the above-described (1), polynucleotide encoding modified TNF alphaderived peptide fused with polynucleotide encoding Venezuelan equine encephalitis virus structural polypeptide was prepared (see SEQ ID No.15) to construct an expression vector followed by transfection in 293F cells.
VEEV-TNFa VLPs were purified by density gradient centrifuge. As seen in Lane 4, TNF alpha-derived peptide and VEEV expression was confirmed by Western blot using TNFa monoclonal antibody (top panel) and VEEV polyclonal antibodies (bottom panel), respectively(see Fig.2).
The spatial distance between the N-terminal residue and C-terminal residue of the TNF alpha-derived peptide is 8.27Â when the distance is determined in a crystal of TNF alpha.
(3) Détection of anti-human TNF alpha antibody in immunized mouse
Mice were divided into three groups (n=5 for each group). The Chikungunya virus like particle comprising a virus structural polypeptide and human TNF alpha-derived polypeptide prepared according to the above-described (1) (referred to as CHIKV-TNF alpha below), Chikungunya virus like particle without comprising human TNF alpha-derived polypeptide (referred to as CHIKV-VLP below), Venezuelan equine encephalitis virus like particle comprising a virus structural polypeptide and human TNF alpha-derived polypeptide prepared according to the above-described (2)(referred to as VEEV-TNF alpha below), Venezuelan equine encephalitis virus like particle without comprising human TNF alpha-derived polypeptide (referred to as VEEV-VLP below) or vehicle (i.e. PBS) were intramuscularly administered to each group of mice. The mice were administered at the beginning of the experiment (referred to as 0 week below) and three weeks after the first administration (referred to as 3 week below) as described below: Group 1: VEEV-TNF alpha (0 week), CHIKV-TNF alpha (3 week); Group 2: VEEV-VLP (0 week), CHIKV-VLP (3 week); and Group 3: PBS (0 week), PBS (3 week).
weeks after the beginning of the experiment, blood sample was obtained from each mouse and sérum was prepared. Produced anti-human TNF alpha antibody was detected using ELISA where TNF alpha protein was coated on ELISA plate. The results show that the virus like particle comprising a virus structural polypeptide and human TNF alpha-derived polypeptide induced anti-human TNF alpha antibodies in mouse (see Fig.9).
(4) Préparation of Venezuelan equine encephalitis virus like particle comprising a virus structural polypeptide and a fragment of human CD20
According to the above-described (1) and (2), VEEV-CD20 VLPs were purified by density gradient centrifuge, and a fragment of CD20 and VEEV expression was confirmed by Western blot. IYNCEPANPSEKNSPSTQYCYSIQ (SEQ ID No.: 21), which is a fragment of CD20, was used as an antigen fused with Venezuelan equine encephalitis virus structural polypeptide.
The spatial distance between the N-terminal residue and C-terminal residue of the CD20 fragment is 10.07Â when the distance is determined in a crystal of CD20.
(5) Préparation of Venezuelan eguine encephalitis virus like particle comprising a virus structural polypeptide and a fragment of human CTLA4
A fragment of CTLA4: CKVELMYPPPYYLGIG(SEQ ID No.: 22) was selected based on the full-length CTLA4 amino acid sequence so that spatial distance between the N-terminal residue and the C-terminal residue of the fragment, which is fused into Venezuelan equine encephalitis virus structural polypeptide E2, is about 5.6Â when the distance is determined in a crystal of CLTA4.
A polynucleotide encoding the fragment of CTLA4 was introduced into VLP_VEEV VLP 518 vector to construct a plasmid for the expression of the fragment of CTLA4 fused with Venezuelan equine encephalitis virus structural polypeptide consisting of the amino acid sequence by SEQ ID No.:8.
(6) Préparation of Venezuelan equine encephalitis virus like particle comprising a virus structural polypeptide and full length human CTLA4
A polynucleotide encoding full length human CTLA4 was introduced into VLP_VEEV VLP 518 vector to construct a plasmid for the expression of CTLA4 fused with Venezuelan equine encephalitis virus structural polypeptide.
The spatial distance between the N-terminal residue and the C-terminal residue of full length human CTLA4 is about 39.6Â when the distance is determined in a crystal of CLTA4.
Expression of CTLA4 fused with Venezuelan equine encephalitis virus structural polypeptide was not be able to be detected by ELISA after transfecting 293 cells with the prepared plasmid.
(7) Préparation of Chikungunya virus like particle comprising a virus structural polypeptide and a fragment of human or mouse CD20 and détection of anti-human or mouse CD20 antibody
Chikungunya virus like particles comprising a virus structural polypeptide and a fragment of human or mouse CD20 were prepared using VLP_CHI 532 vector and a fragment of human or mouse TNF alpha antibody. The fragment of human and mouse TNF alpha antibody are described below: CD20 Human iyncepanpseknspstqycysiq (SEQ ID No.:21); CD20 Mouse ydcepsnsseknspstqycnsi (SEQ ID No.:41).
Likers (e.g. SGG, SG, GS or GGS) were used to insert the fragment of CD20 as described below between G at 519-position and Q at 520-position of SEQ ID No.2:
CD20 Human: SGGiyncepanpseknspstqycysiqGS (SEQ ID No.:42)
CD20 Mouse version2: SGydcepsnsseknspstqycnsiGGS (SEQ ID No.:43)
CD20 Mouse version3: SGGydcepsnsseknspstqycnsiGS (SEQ ID No.:44).
Plasmids: VLP_CHI VLP 532 CD20H, VLP_CHI VLP 532 CD20-2 mouse and VLP_CHI VLP 532 CD20-3 mouse were used for the expression of Chikungunya virus like particles comprising a virus structural polypeptide and a fragment of human or mouse CD20 (SEQ ID No.: 45 (the amino acid sequence of the expressed polypeptide is represented by SEQ ID No.: 46), SEQ ID No.: 47 (the amino acid sequence of the expressed polypeptide is represented by SEQ ID No.: 48) and SEQ ID No.: 49 (the amino acid sequence of the expressed polypeptide is represented by SEQ ID No.: 50).
Virus like particles were purified according to the method as described in (1). Mice were immunized once with 100pg of the purified VLPs; 100pg of the fragment of human or mouse CD20; or PBS (control). Ten days after the immunization, blood sample were obtained from the mice and sérum was prepared. Anti-human CD20 antibody induced by the immunization was detected by ELISA coated with the fragment of human CD20, and anti-mouse CD20 antibody induced by the immunization was detected by ELISA coated with the fragment of mouse CD20. The results showed that anti-human CD20 antibodies and anti-mouse CD20 antibodies were adequately induced by administration of the Chikungunya virus like particle comprising the fragment of human or mouse CD20 fused with virus structural polypeptide. Also, the results showed that antibody spécifie for a self antigen can be adequately induced by administering Chikungunya virus like particle comprising a fragment of the self antigen fused with virus structural polypeptide (see Fig. 10 and Fig. 11).
Claims (24)
1. A particle which is capable of being self-assembled, comprising a polypeptide and at least one antigen, wherein said polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said polypeptide and said antigen are linked through said at least one first and said at least one second attachment site, and wherein spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 Â or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containîng the antigen or modified protein therefrom.
2. The particle according to Claim 1, wherein said particle is virus like particle.
3. A particle comprising a virus structural polypeptide and at least one antigen, wherein said virus structural polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said virus structural polypeptide and said antigen are linked through said at least one first and said at least one second attachment site, and wherein said particle is virus like particle.
4. The particle according to Claim 2 or Claim 3, wherein said virus like particle is derived from alphavirus or Flavivirus selected from the group consisting of Aura virus, Babanki virus, Barmah Forest virus (BFV), Bebaru virus, Cabassou virus, Chikungunya virus (CHIKV), Eastern equine encephalitis virus (EEEV), Eilat virus, Everglades virus, Fort Morgan virus, Getah virus, Highlands J virus, Kyzylagach virus, Mayaro virus, Me Tri virus, Middelburg virus, Mosso das Pedras virus, Mucambo virus, Ndumu virus, O'nyong-nyong virus, Pixuna virus, Rio Negro virus, Ross River virus (RRV), Salmon pancréas disease virus, Semliki Forest virus, Sindbis virus, Southern éléphant seal virus, Tonate virus, Trocara virus, Una virus, Venezuelan equine encephalitis virus (VEEV), Western equine encephalitis virus (WEEV),Whataroa virus, West Nile virus, dengue virus, tick-borne encephalitis virus and yellow fever virus.
5. The particle according to Claim 4, wherein said alphavirus is Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV).
6. The particle according to any one of Claims 2-5, wherein said polypeptide is virus structural polypeptide comprising an envelope protein.
7. The particle according to any one of Claims 1-6, wherein said at least one antigen is inserted in to E2 of the envelope protein.
8. The particle according to any one of Claims 1-7, wherein said antigen is at least one selected from the group consisting of self antigens and cancer antigens.
9. The particle according to any one of Claims 1-8, wherein said antigen is a polypeptide derived from TNF-α, CD20 or CTLA4.
10. The particle according to any one of Claims 1-9, wherein said polypeptide and said at least one antigen is
i) a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide of TNF-a;
ii) a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide of CD20;
iii) a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide of TNF-α; or iv) a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide of CD20
v) a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide of CTLA4.
11. The particle according to any one of Claims 1-10, wherein said at least one antigen and said polypeptide are expressed as a fusion protein.
12. The particle according to Claim 11, wherein said at least one antigen are fused with said polypeptide, wherein one or two linkers intervenes between N-terminal residue of said antigen and said polypeptide and/or between C-terminal residue of said antigen and said polypeptide.
13. The particle according to Claims 11 or 12, wherein said at least one antigen is inserted between residues 519 and 520 of SEQ ID Nos.1 or 2, between residues 530 and 531 of SEQ ID Nos.1 or 2, between residues 531 and 532 of SEQ ID Nos.1 or 2 or between residues 532 and 533 of SEQ ID Nos.1 or 2.
14. The particle according to any one of Claims 11-13, wherein said fusion protein is a protein consisting of an amino acid sequence represented by SEQ ID Nos. 4, 5, 6, 7 or 8.
15. The particle according to any one of Claims 11-13, wherein said fusion protein is derived from a protein consisting of an amino acid sequence which has a sequence identity of 90% or more with an amino acid sequence represented by SEQ ID Nos. 4, 5, 6, 7 or 8.
16. An isolated nucleic acid molécule comprising a nucléotide sequence that encodes the particle according to any one of Claims 1-15.
17. An isolated nucleic acid molécule consisting of a nucléotide sequence represented by SEQ
ID Nos. 13, 14, 15, 16 or 17.
18. An isolated nucleic acid molécule consisting of a nucléotide sequence which has a sequence identity of 90% or more with a nucléotide sequence encoding represented by SEQ ID Nos. 13, 14, 15, 16 or 17.
19. A vector comprising the nucleic acid molécule according to Claim 18, wherein the vector optionally comprises an expression control sequence operably linked to the nucleic acid molécule.
20. A pharmaceutical composition comprising:
(a) the particle according to any one of Claims 1-15 and/or the nucleic acid molécule according to any one of Claims 16-19; and (b) a pharmaceutically acceptable carrier.
21. A vaccine composition comprising the particle according to any one of Claims 1-15.
22. Use of the particle according to any one of Claims 1-15 and/or the nucleic acid molécule according to any one of Claims 16-19 for the manufacture of a médicament for producing antibody;immunomodulation; treating an autoimmune dîsease; inducing and/or enhancing immune response against an antigen in a mammal; treating cancer; or presenting an antigen on macrophage.
23. Use according to Claim 22, wherein said at least one antigen is a cancer antigen.
24. A method for producing the particle according to Claims 11-15, comprising preparing a gene comprising a nucléotide sequence encoding said particle; culturing a cell which is transfected with said gene to express said particle; and recovering said particle.
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
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US61/599,746 | 2012-02-16 |
Publications (1)
Publication Number | Publication Date |
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OA17353A true OA17353A (en) | 2016-09-21 |
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