OA16380A - Device for dispensing a fluid at substantially constant pressure. - Google Patents

Device for dispensing a fluid at substantially constant pressure. Download PDF

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Publication number
OA16380A
OA16380A OA1201300154 OA16380A OA 16380 A OA16380 A OA 16380A OA 1201300154 OA1201300154 OA 1201300154 OA 16380 A OA16380 A OA 16380A
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OAPI
Prior art keywords
binding partners
capillary tube
détection
région
sample
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OA1201300154
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French (fr)
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Reynier Sylvain
Reynier Arnaud
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Publication of OA16380A publication Critical patent/OA16380A/en

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Abstract

L'invention concerne un dispositif pour dispenser un fluide comprenant : - une première plaque P1, - une deuxième plaque P2, - un récipient souple disposé entre ces deux plaques S, et - un moyen de rappel d'une plaque vers l'autre R. De plus, ce dispositif comprend un moyen d'articulation O1-B1, O2-B2 pour relier les deux plaques P1, P2 à proximité d'un de leurs bords respectifs. The invention relates to a device for dispensing a fluid comprising: - a first plate P1, - a second plate P2, - a flexible receptacle arranged between these two plates S, and - a return means from one plate to the other R In addition, this device comprises an articulation means O1-B1, O2-B2 for connecting the two plates P1, P2 near one of their respective edges.

Description

The présent invention relates to an assay device for use in determining the presence and/or amount of a particular analyte in a liquid sample. The invention has particular (but not exclusive) application to the analysis of biological samples and is particularly useful for medical diagnosis applications. The device may be used, for example, for analysing a liquid sample (e.g. a body fluid such as blood, urine, CSF or sputum or one prepared from tissue, e.g. by homogénisation) from a patient to détermine the presence and/or amount of an analyte, e.g. organisms (bacteria, parasite or virus etc) which are foreign to the human body or the presence of cells of a particular type (e.g. tumour cells), thereby providing a diagnosis of a medical condition.
Medical diagnosis is, of course, a well advanced science. Many such diagnoses of samples (e.g. blood, urine, CSF, tissue and sputum) from patients are routinely carried out by hospitals, doctors surgeries and other medical centres every day. Many such diagnoses require that the sample be taken from a patient and sent to a laboratory (which may be on the premises of the medical centre) for an analysis procedure. By example only, methods are available that are used in a centralised laboratory by trained staff that are based upon PCR. Such methods often require interprétation of the results ( this is true particularly when q PCR is the test system) that are obtained and if not performed correctly can produce misleading results since any nucleic acid amplification system has the possibility that it can produce a mismatch that once formed results in an amplified négative ( abortive) signal. Furthermore such methods frequently require lengthy gel development steps or column séparation steps to obtain the resuit, which may then require skilled interprétation. Consequently some considérable time may elapse between the time when the sample is taken and the resuit is available to the medical practitioner who can then prescribe any necessary treatment.
It is therefore an object of the présent invention to obviate or mitigate the above mentioned disadvantages.
According to a first aspect of the présent invention there is provided an assay device for determining the presence and/or amount of an analyte présent or potentially présent in a processed liquid sample, the device comprising:
(i) a capillary tube having an upstream région into which the sample to be assayed is introduced for transfer by capillary action along the capillary tube to a downstream région thereof;
(ii) a collection of first binding partners immobilised within the capillary tube, said first binding partners being capable of specifically binding to the analyte;
(iii) a collection of second binding partners displaceabley bound to a fraction of said first binding partners whereby there are free first binding partners immobilised within the capillary tube, said second binding partners having a label and being displaceable from the first binding partners by the analyte to be detected; and (iv) a détection région for sample that has transferred to said downstream région of said capillary tube, said détection région being adapted to generate a détectable signal from the label on displaced second binding partners that hâve transferred to the downstream région.
According to a second aspect of the présent invention there is provided a method of assaying a liquid sample for determining the presence and/or amount of an analyte présent or potentially présent in the sample, the method comprising the steps of:
(a) providing a capillary tube having immobilised therein a collection of first binding partners capable of specifically binding to the analyte, said capillary tube further incorporating a collection of second binding partners displaceabley bound to a fraction of said first binding partners whereby there are free first binding partners immobilised within the capillary tube, said second binding partners having a label and being displaceable from the first binding partners by the analyte to be detected;
(b) causing the liquid sample to flow from an upstream end of the capillary tube to a downstream end thereof; and (c) detecting for the presence of the label at the downstream end of the capillary tube.
In the following description, features described in relation to the assay device of the invention (i.e. the “first aspect”) are to be considered applicable mutatis mutandis to the method (“second aspect”) of the invention and vice versa.
The assay device of the invention is capable of detecting the presence and/or amount of a particular analyte présent or potentially présent in a sample without giving “false positives. The basis of the invention lies in the use of the immobilised first binding partners and second binding partners that are displaceably bound thereto. There are two important features in relation to the first binding partners. The first is that they may be highly spécifie to the analyte to be determined.
Secondly, a fraction (less than 100%) of the immobilised first binding partners hâve the labelled second binding partners displaceably bound thereto. Given that the sample to be analysed contains the particular analyte of interest then this analyte will displace the second binding partners from the (immobilised) first binding partners and they (the second partners) will be transferred by the capillary flow to the détection région where the label will cause a détectable signal to be produced. Détection of the signal is confirmation that the particular analyte was présent in the sample. On the contrary, if the particular analyte is not présent in the sample then (at least in an idealised case) there will be no displacement of the second binding partners from the (immobilised) first binding partners and consequently no signal can be generated at the détection région. However, in practice, it is possible that one or more components in a sample being analysed (which does not otherwise contain the particular analyte under investigation) may hâve a low probability of displacing some second binding partners. Should this happen, the displaced second binding partners will be trapped” by one or other of the fraction of the immobilised first binding partners that do not hâve a second binding partner bond thereto. Consequently in this case where there has been some initial displacement of second binding partners none will reach the détection région and therefore no signal is generated. In the idealised cases described so far, it has been assumed that labelled, second binding partner can only reach the détection région if displaced by the target analyte. However we do not exclude the possibility that labelled, second partner displaced by species in the sample other than the target analyte will ultimately reach the détection région, ln this case, two possibilities may be envisaged. The first is that the sample does contain the target analyte, in which case signal produced by labelled second binding partners displaced by the target analyte will be much greater than any signal produced by labelled second binding partners displaced by “non-target” analyte. In the second case, there is no target analyte in the sample, in which case any labelled, second binding partners displaced by “non-target analyte will only give rise to a very low signal. It is possible to take account of these two cases by detecting for signa) only above a particular intensity and/or running a control capillary (see infra) in which case the signal from the détection région of the control capillary may be “subtracted from that produced at the détection région of the “assay capillary” to provide a net signal for the latter. Thus “false positives” are avoided.
The assay device of the invention is particularly useful for the analysis of aqueous samples and has particular applicability to medical samples (e.g. blood, sputum CSF or urine) to détermine the presence therein of a target analyte which would be indicative of a particular medical condition afflicting a patient from whom the sample was taken. If necessary, such medical samples may be subjected to a standard lysîs procedure before being subjected to the analysis, particularly in the case where the target analyte is a nucleic acid see infra. Alternatively or additionally the sample may be diluted with water or buffer (e.g. PBS) to reduce its viscosity to allow for capillary flow.
In preferred embodiments of the invention, the device will additionally comprise a control capillary tube into which a fraction of the sample is introduced for transfer by capillary action along the control capillary tube to a downstream région thereof. Such an embodiment will further comprise a détection région for sample that has been transferred along the control capillary tube to the downstream région thereof. In this embodiment, the control capillary tube is devoid of second binding partners. For the purposes of determining the resuit of an analysis, the détection régions of the “assay capillary tube and the “control capillary tube” maybe compared to détermine the net signal resulting from the former.
Preferably 10-90% by mole, more preferably 50-70% by mole, of the first binding partners hâve second binding partners bound thereto.
Generally there will be at least 10 pmol of first binding partners in the capillary tube. Ideally there are more molécules of second binding partners in the capillary than there are target molécules in the sample otherwise generated signal may plateau (as explained with reference to Fig 1 below).
Preferably the first binding partners are covalently immobilised within the capillary tube.
The first and second binding partners may take a number of forms. Thus, in one embodiment of the invention, the (immobilised) first binding partners may comprise nucleic acid sequences and the labelled, second binding partners may also comprise nucleic acid sequences hybridised thereto. The nucleic acid sequences may comprise DNA, RNA, mRNA or PNA (Protein Nucleic Acid) sequences. The immobilised, nucleic acid sequence may be one selected so as to be specifically hybridisable to (at least part of) a target nucleic acid sequence which is potentially présent in the sample to be assayed. Thus the first binding partner will hâve a sequence which is ideally fully complementary to a sequence which is characteristic of the target nucleic acid. It will however generally be preferred that there is a degree of mismatch between the sequence of the immobilised nucleic acid and that of the labelled nucleic acid. This will ensure that the labelled nucleic acid is displaceable from the immobilised nucleic acid by the target nucleic acid. Generally there will be at least 60%, but usually less than 100%, sequence homology between the immobilised nucleic acid and the labelled nucleic acid.
In the case of a sample from a patient, (e.g. blood, urine CSF or sputum) the target nucleic acid may be one that is characteristic of a particular organism (e.g. bacteria, parasite or virus) with which the patient may be infected. Thus, in this case, the test is carried out as a diagnosis of whether the patient is afflicted by that organism. The target nucleic acid sequence may for example be présent in chromosomal or plasmid DNA. Alternatively the nucleic acid may be one that is characteristic of malignant tissue (tumour cell).
The assay device of the invention is applicable to diagnosis of a wide range of medical conditions by testing for the presence of a particular nucleic acid sequence (characteristic of the medical condition) présent in a sample taken from the patient. Purely by way of example, the assay device may be one for determining the presence (or otherwise) of the organism Neisseria meningitides which is known for its rôle in meningitis and other forms of meningococcal disease. In this case, the immobilised oligonucleotides (i.e. the “first binding partners) may be selected from: ATTTTAATTACGAAGGCTACGCATT;
GGGACACCCGCGAAGTTTTGGAAGC; CTGTCAGTTGTCTCGTGCATTGTCA;
GTTGCGGGCTGTTGCGTCGGAAACC; ATGGATAAGCGCGACCAGTTCGCCG;
GATGTGTTTGGCAATCATGGCTTG; CACAAGTGATGCGTCCGAGCGTAA.
By way of a further example, the assay device may be one for diagnosing Chlamydia in a patient, in which case the immobilised oligonucleotides may be selected from the following: GAGAACCAGACTAAAGTTTCAA AAAAAACGGTCAAAGCGGAGTC ACAGATACTGCCTTCTCTTGG ATCTGCAGCAGGTTTCGTGG
CAGGCTGCGTGGCGTTTT ACAAAATCTTCTGATTTTAATACAGC TCTTTTTCCTAACACCGCTTTGAA AACACTGCTTTGGATCGAGCTGTG
As an alternative to the use of nucleic acid sequences, the first binding partner may comprise an antibody and the second binding partner may comprise a labelled antigen or a labeiled antigen/antibody complex. The immobilised antibody which forms the first binding partner will be spécifie for a target antigen potentially présent in a sample to be assayed. The immobilised antibody may, for example, be a monoclonal antibody. Non-limiting examples of monoclonal antibodies suitable for use in the invention are detailed below.
1. Clone number M2110184 from Fitzgerald against Neisseria Gonorrhoeae which shows no reactivity against N.meningitides, Chlamydia trachomatis or other Neisseria species.
2. 10C13A from Fitzgerald against Chlamydia trachomatis.
In the case of (2), the second binding partner may, for example, be a complex of an antigen and a labelled monoclonal antibody, e.g. labelled Monoclonal antibody M4020311 (Cat# 10-C13A). In this case, the second binding partner which is displaced by target analyte (if présent in the sample) is the complex of the antigen and the labelled monoclonal antibody.
Many other antibodies are commercially available from other suppliers to cover a range of pathogens.
A still further possibility is that the assay device of the invention may be for the détection of a particular organism (e.g. a bacterium) by virtue of the presence of a particular glycan on the surface of the organism. Lectins are glycan binding proteins. Both lectins and glycans are found on cell (mammalian, bacterial) surfaces, viruses, protozoa, cyanabacteria etc. Proteins with lectin activity corne under different names, e.g. galectins, selectins etc for mammalian cells, adhesins for bacterial cells, hemagglutinins for viruses. Also plants are a rich source of a diverse family of lectins (thousands of members) that can be easily purified and used for cell glycophenotyping.
In such a device, for detecting a particular organism by virtue of the presence of a spécifie lectin (e.g. an adhesin in the case of a bacterium) on its surface, the immobilised first binding partner may be a polysaccharide to which the surface lectin of the organism is capable of binding and the labelled second binding partner displaceably bound thereto may (for example) be a plant lectin capable of binding to the polysaccharide but also capable of being displaced therefrom by stronger binding of the cell lectin.
For the purpose of detecting the label on the second binding partners that hâve been displaced from the first binding partners and reached the détection région, there may be provided in the détection région a reagent system capable of interacting with the label to generate a détectable signal. The label on the second binding partner may be an enzyme and the reagent system (in the détection région) may comprise a substrate for the enzyme. Altematively (although less preferred) the reagent system may comprise an enzyme and the label is a substrate for the enzyme. In a further embodiment of the invention, the label may be a “direct” label, i.e. one which provides a signal itself without the need for a reagent system to develop a signal.
In particularly preferred embodiments ofthe invention, the détectable signal is a light signal, most preferably a colour change. Détection of a colour change at the détection région may be effected by a détection arrangement of type known per se. This arrangement may be one which detects reflected or transmitted light for the purpose of determining the colour change. If the assay device includes a “control capillary with associated détection région then the détection arrangement may make measurements at the détection régions of both the “assay capillary tube and the “control capillary tube and compare the results to détermine the net change produced by the assay capillary tube.
Examples of labels that may be employed for the purposes of the invention are included in the following table (Table 1):
Table 1
Label attached to second binding partner Substrate for signal génération
Alkaline Phosphatase 1 2 Dioxoetane (chemiluminescent) D luciferin-O-Phosphate (Bioluminescent) BCIP/NBT - Blue colour
Horse radish peroxidise Luminol
Acridinium Ester No Substrate Required - Acridinium Ester is a direct chemiluminescent label
Devices in accordance with the invention will generally be prepared from a substrate (preferably polycarbonate) which is produced with open-topped channels which (when covered) provide the capillary pathways. The substrate may be treated to effect immobilisation of the first binding partners and the channels then covered to complété the capillary pathways.
It is preferred that the first binding partners are covalently bound within the capillary tube.
Various immobilisation chemistries may be used. In a preferred embodiment of the invention, the surface of the substrate is treated so as to hâve free thiol groups (-SH) which are connected by means of a linker group to the surface of the substrate and which may then be reacted with an amino group of the binding partner to be immobilised. In the case where the substrate is polycarbonate, there may be an initial nitration reaction (so as to nitrate aromatic groups of the polycarbonate) followed by a subséquent réduction to convert the nitro groups to amino groups. These may subsequently be reacted with a compound comprising an alkylene group terminated, at one end, with a thiol group and, at the other end, with a group capable of reacting with the amino groups. Examples of this type of chemistry are disclosed, for example, in US 2009/0181442.
A further example of immobilisation chemistry that may be used is disclosed in US-A-5 910 406 (Tepnel).
The invention will be further described by way of example only with reference to the accompanying drawings, in which:
Fig 1 schematically illustrâtes a first embodiment of assay device in accordance with the invention;
Fig 2 illustrâtes use ofthe device shown in Fig 1 detecting a target nucleic acid in a sample;
Fig 3 illustrâtes the manner in which the device shown in Fig 1 avoids “false positives in an assay procedure;
Fig 4 schematically illustrâtes a second embodiment of assay device in accordance with the invention;
Fig 5 is a schematic view of a third embodiment of assay device in accordance with the invention;
Fig 6 schematically illustrâtes a moulding for producing an assay device in accordance with the invention;
Fig 7 illustrâtes a further embodiment ofthe invention; and
Fig. 8 shows plan and side views of a further embodiment of an assay device in accordance with the invention.
Reference is firstly made to Fig 1 which schematically illustrâtes one embodiment of assay device 1 in accordance with the invention for analysis of a liquid sample to détermine the presence therein of a nucleic acid (the “target nucleic acid”) having a particular sequence of bases. The liquid sample may, for example, be a body fluid sample from a patient (e.g. blood, urine CSF, sputum or smear any one of which may be diluted as necessary to an appropriate viscosity) or may be one produced from a tissue biopsy (e.g. by homogénisation) from a patient. The sample may be one that is to be tested for the possible presence of a foreign organism (such as a bacteria, parasite or virus) having a particular nucleic acid sequence which is characteristic of that organism.
The illustrated device 1 comprises a capillary tube 2 (having a capillary bore 2a) associated with a sample receivîng station 3 at its upstream end and a détection région 4 at its downstream end. Typîcally the capillary bore 2a will hâve a cross-sectional size in the range 0.1-0.5mm. The sample receiving station 3 and détection région may, for example, comprise pads of absorbent material, for example, Whatman filter paper or Whatman Grade GF/B Glass Microfiber Filters, saturated with a buffer to maintain a particular pH characteristic, for example phosphate buffered saline. If the assay device is intended to detect a nucleic acid then the pad may contain a hybridisation buffer (e.g. 2X SSC (300mM sodium chloride 30mM sodium citrate). Formamide can be added to reduce the stringency of hybridisation (for example <50%)). The arrangement is such that liquid sample introduced at the sample receiving station 3 is able to pass into the upstream end of capillary bore 2a along which it then travels by capillary action to reach the détection région 4.
Provided over an upstream région of the capillary bore 2a is a collection of single-stranded oligonucleotides 5 (the “first binding partners”) that are covalently immobilised on the wall of the capillary bore 2a. These oligonucleotides hâve a sequence which has 100% homology with a sequence in the target nucleic acid (and is therefore capable of specifically hybridising to the target nucleic acid) which is being assayed for in the sample (e.g. the nucleic acid that is characteristic of a particular bacteria or virus). For simplicity, the oligonucleotides 5 are shown as being arranged in a single line along the interior of the capillary bore 2a but it will be appreciated that, in practice, oligonucleotides 5 will be arranged both around the wall of the capillary bore 2a and longitudinally therealong. Generally the oligonucleotides will comprise a sequence of 15 - 40 bases. They can be bonded to the capillary by either their 5’ or 3’ ends. Many such oligonucleotide sequences which are capable of specifically binding to nucleic acids which are characteristic of organisms are known and are available from databases such as Genbank and are therefore not further described here, although a few spécifie examples are given elsewhere in the présent spécification.
The oligonucleotides 5 may be présent over about the first 25% of the length of the capillary bore 2a but other values are possible and will generally be in the range 10-90%.
Further provided within the capillary bore 2a is a collection of labelled, single-stranded oligonucleotides 6 (the “second binding partners), the label being indicated by the symbol.
Labelled oligonucleotides 6 hâve some sequence homology (usually at least 60 % but generally less than 100%) with the immobilised oligonucleotides 5 and, as depicted în Fig 1, are hybridised to the immobilised oligonucleotides 5. That said, the number of labelled oligonucleotides 6 is only a fraction of the number of the immobilised oligonucleotides 5. Typîcally this fraction will be in the range 10% to 90% by mole ratio. Ail labelled oligonucleotides 6 are hybridised to an immobilised oligonucleotide 5 (there are no free labelled oligonucleotide 6 in the device) but there is a sub-collection of immobilised oligonucleotides 5 which are free in the sense that they do not hâve a labelled oligonucleotide 6 hybridised thereto. It is this proportion of “free immobilised oligonucleotides 5 which are important in the device to prevent “false positives. The manner in which such “false positives” are avoided is described in more detail below.
Purely for the purposes of explanation, the sub-collection of immobilised oligonucleotides 5 not having labelled oligonucleotides 6 hybridised thereto is shown as being positioned downstream of the remaining immobilised oligonucleotides (i.e. those having labelled oligonucleotides 6 hybridsed thereto).
Brief reference was made above to the détection région 4. At this détection région 4 there is provided a reagent R that will interact with the label provided on the labelled oligonucleotides 6 so as to produce a détectable signal. Thus, for example, the label on labelled oligonucleotide 6 may be an enzyme and the détection région incorporâtes a substrate for the enzyme, the combination of the enzyme and substrate being such that a détectable signal is produced. Although not illustrated in Fig 1, détection station 4 will be associated with a détection arrangement capable of detecting the type of signal generated by interaction of the label on oligonucleotides 6 and the reagent at the détection région 4. In preferred embodiments of the invention, the signal generated is a light signal preferably a colour change. Détection of such a colour change may be by means of reflected, emitted or transmitted light.
The détection région 4 may take various forms. Thus, for example, the région may comprise an absorbent material impregnated with the reagent R. However in a more preferred embodiment of the invention, the détection région comprises a well or the like containing liquid or freeze dried reagent R. In this preferred embodiment, the device îs configured so that the liquid that has reached the end of the capillary pathway is discharged into the well so that the label on any displaced binding partner can react with reagent R and produce a colour change for détection.
The manner in which the assay device 1 illustrated in Fig 1 functions to détermine whether or not a particular analyte (in this case the target nucleic acid of a particular sequence) is présent in a liquid sample to be analysed will now be explained with reference to Fig 2 in which the same référencé numerals are used as in Fig 1 to dénoté the same features. For the purposes of Fig 2, it is assumed that the liquid sample 10 to be assayed has been taken from a patient infected with a particular organism in which the target nucleic acid is présent and the assay device 1 is intended to detect the presence of that nucleic acid (schematically depicted by reference numéral 11) and hence confirm infection of the patient by that organism. Thus the immobilised oligonucleotides 5 hâve sequence homology with the nucleic acid strands 11 to be detected.
The liquid sample to be analysed is shown in Fig 2 as being applied as drops to the sample receiving station 2 from where it passes into the upstream end of the capillary tube 2 and then on to the détection région 4, as depicted by the arrow.
Nucleic acid strands 11 will displace labelled oligonucleotides 6 from the immobilised oligonucleotides 5 to which they are hybridised. This is ensured by the fact that the labelled oligonucleotides 6 do not hâve 100% sequenee homology with the immobilised oligonucleotides 5 and are therefore preferentially displaced by target nucleic acid 11 présent in the sample which does hâve a sequenee with 100% homology to that of the immobilised oligonucleotides 5. Therefore target nucleic acid strands 11 become hybridised to the immobilised oligonucleotides 5 as shown.
Displaced, labelled oligonucleotides 6 that hâve passed beyond the downstream end of the collection of immobilised oligonucleotides 5 are carried by the capillary flow in the tube 2 to the détection région 4 where the label (on the oligonucleotide 6) and the reagent provided at the détection région 4 (capable of interacting with the label) together produce a détectable signal which confirms the presence of the nucleic acid strands 10 in the sample being assayed. In preferred embodiments of the invention, the label and the reagents will together interact to produce a light signal depicted generally as 12, the émission, or production, of which may be checked for électronically to confirm the results of the diagnosis.
The intensity of the signal generated is dépendent on the number of molécules of labelled oligonucleotide 6 compared to the number of molécules of target nucleic acid in the sample, provided that the latter does not exceed the former. For the purposes of a simplifled explanation, reference is made to the assay device 1 shown in Fig 1 for which there are nine labelled oligonucleotides 6. If the analyte contains, say, four target nucleic acid strands then (in an idealised case) four of the labelled oligonucleotides 6 will reach the détection région 4. Similariy if the sample to be analysed contains, say, seven target nucleic strands then correspondingly seven of the labelled oligonucleotides 6 will reach the détection région, thus providing a more intense signal than in the case where there were four target nucleic acid strands in the sample. Similariy nine target nucleic acid strands in the sample then nine labelled oligonucleotides 6 will reach the détection région, thereby giving rise to a more intense signal than the first two cases. If the sample contains more than nine target nucleic acid strands then it will still be the case that “only nine of the labelled oligonucleotides will reach the détection région. It will thus be appreciated that the number of labelled oligonucleotides 6 should be “tailored” so as to exceed the maximum number of anticipated target nucleic acid strands, particularly if the assay device is to be used for quantitative work.
A very important feature of the device is its ability that it does not give rise to “false positives” (i.e. a resuit suggesting that the nucleic acid being assayed is présent in the sample when it is not. This important feature results from the presence of the immobilised oligonucleotides 5 at (in the original assay device) do not hâve a labelled oligonucleotides 6 hybridised thereto. This advantage is illustrated schematically in Fig 3, for which it is assumed that the sample being analysed contains nucleic acid 12 which is not the particular nucleic acid 10 of interest and there is no such nucleic acid 10 présent in the sample. In this case, there is the possibility that the nucleic acid 12 will displace some of the labelled oligonucleotides 6 from the immobilised oligonucleotides 5 to which they were originally hybridised. However these displaced, labelled oligonucleotides 6 will be captured by immobilised oligonucleotides 5 in the sub-collection thereof that were not originally hybridised to labelled oligonucleotides 6. Statistically the chances of nucleic acid 12 displacing labelled oligonucleotides 6 is relatively low (although not zéro). Consequently it is overall much more likely that any displaced, labelled nucléotide 6 will be re-captured by immobilised oligonucleotides 5 and be retained thereon so as not to pass to the détection région 4. As a resuit, no signal is generated at that région and false positives are avoided.
Generally there will be numerically more of the immobilised oligonucleotides 5 than the number of strand of target nucleic acid sequence 10 that would be anticipated to be présent in the sample being assayed. Typically the fraction of the fraction of the immobilised oligonucleotides 5 to which are hybridised the labelled oligonucleotide 6 will be from 50 -90 %.
The oligonucleotides 5 and 6 may without limitation be DNA, RNA mRNA or PNA The illustrated device may be used for the détection of various medical conditions characterised by the presence of a spécifie nucleic acid sequence in a sample taken from a patient. Thus, for example, the device may be used for determining whether or not a particular bacteria is présent in the sample taken from the patient. As a development of this possibility, the device may also be used for testing whether the bacteria is présent in a “live or “dead form. The use of DNA of appropriate sequence for the immobilised oligonucleotides 5 and labelled DNA oligonucleotides 6 can be used to détermine whether or not the bacteria is présent in the sample, but will not indicate whether or not the bacteria is in a “live” or “dead form. The use of mRNA of appropriate sequence for the immobilised oligonucleotides 5 and labelled mRNA oligonucleotides 6 can be used to détermine whether the bacteria présent in the sample is in a “live form since a positive signal resulting from mRNA capture confirms that the bacteria is alive, i.e it is producing proteins and thus distinguishes between “live and “dead forms of the bacteria. A négative mRNA resuit indicates that the bacteria is not alive. Thus from two tests the bacterial presence can be determined and that it is active or not.
Reference is now made to Fig 4 which illustrâtes an alternative embodiment of assay device in accordance with the invention. This embodiment is intended for use în detecting whether a particular antigen is présent in a sample taken from a patient and to this end the immobilised oligonucleotides 5 (of the device of Fig 1) are replaced by immobilised antibodies 45 and the labelled oligonucleotide 6 (ofthe device of Fig 1) are replaced by labelled antigens 46, the device 41 further comprising a capillary tube 42 (with a capillary bore 42a), sample receiving station 43 and détection région 44 which are respectively équivalent to the capillary tube 2, sample receiving station 3 and détection région 4 of the device of Fig 1. The antibodies 46 are spécifie to the antigen to be detected in the sample taken from the patient. The labelled antigens 46 (apart from their label) identical with the antigens in the sample to be detected. The relative numbers of the immobilised antibodies 45 and the labelled antigens 46 may be the same as discussed in relation to Fig 1 for the relative numerical amounts of the immobilised oligonucleotides 5 and label oligonucleotides 6.
The assay device 41 illustrated in Fig 4 may be used for detecting a particular disease as characterised by the presence of a particular antigen (e.g. a virus) in a sample taken from the patient. A further use of the device illustrated in Fig 1 is to monitor the effectiveness of a particular therapy being used to treat an infection caused by a particular bacteria or virus. In this case, the device is used quantitatively to détermine relative amounts (greater, lower etc) of the particular antigen in samples taken over a period of time from the patient under investigation, lf the intensity of the detected signal goes down over time then this demonstrates reducing amounts of the antigen with increasing time and thus confirms effectiveness ofthe treatment.
It may be the case that biological samples to be assayed by devices in accordance with the invention incorporate extraneous matter which is ideally removed before the liquid sample passes to the région of the immobilised oligonucleotides 5 and labelled oligonucleotides 6 (in the case of the device of Fig 1) or the immobilised antibodies 45 and labelled antigens 46 (in the case of the device of Fig 4). Whilst it is possible to undertake some préparation of the sample before it is applied to the sample receiving station, Fig 5 illustrâtes a convenient modification to the illustrated devices which avoids the need for such separate sample préparation. The arrangement of Fig 5 may be applied to either the assay device of Fig 1 or assay device 41 of Fig 4. However for convenience the arrangement will be described principally in relation to Fig 1 with the corresponding parts of Fig 4 being given in parenthèses. In the device 1 (41) of Fig 5, there is a sample treatment région 51 which is provided between the sample receiving station 3 (43) and the upstream end of the capillary tube 2 (42). Sample treatment région 51 has a column matrix 52 selected to apply a particular treatment to a sample moving from the sample receîving station 1 (41) into the capillary tube 2 (42) via capillaries 53 and 54. The “column matrix” may, for example, be an ion-exchange resin (dépendent on the nature of the sample the column matrix could be either anion or cation exchanger) or size exclusion, matrix for example only Sephadex G10 which will retain particles and salts .
Although Figs 1-5 describe the invention with reference to a single capillary tube 2 (Fig 1) or 42 (Fig 4) it will generally be the case that such a capillary tube is associated with a “control capillary tube” in which no immobilised “first binding partners (e.g. oligonucleotides 5 or antibodies 45) or “labelled second binding partners (i.e. labelled oligonucleotides 6 or labelled antigens 46) are provided. An assay carried out using a capillary tube 2 or 42 will be run in parallel with the “control capillary” and the results at the détection régions of both capillary tubes compared to establish the différence in signal provided by the “assay” capillary tube and the “control capillary tube.
Fig 6 illustrâtes a moulded body 61 for use in producing an assay device in accordance with the invention with both “assay” and “control” capillary tubes. Body 61 is of generally cuboid configuration and has a major face (the upper face illustrated in Fig 6) formed with two open-topped channels 62a and 62c, a single well 63 and two further wells 64. Channel 62a is intended for forming an “assay capillary tube and channel 62c is intended for forming a “control” capillary tube. Well 63 is provided at the upstream ends of channel 62a and 62c and is connected by these two channels to respective ones of the wells 64. It will be appreciated that well 63 and wells 64 are for use in forming a sample receîving station 3 and two détection régions 4 (one for the “assay capillary tube and the other for the “control capillary tube).
Body 61 is comprised of an optically transparent, plastics material (preferably polycarbonate). The use of polycarbonate allows an optically clear région in the moulded plastic device at the locations of the wells 64 which (as indicated above) are used in forming détection régions. As a first step in producing a device in accordance with the invention from the body 61 shown in Fig 1, it is necessary that the body 61 (and particularly its open-top channel 62a and 62c) be thoroughly cleaned to remove any remaining mould release agents or other contaminants (particularly hydrophobie contaminants) which may hinder the flow of an aqueous liquid along a capillary tube ultimately formed from the open-topped channels 62a and 62c. Such washing may be with water and détergents. By way of example, the channels may be cleaned by washing with SDS (1-10% in distilled water), drying under a nitrogen atmosphère, subsequently washing with water and absolute éthanol, and finally drying under a nitrogen atmosphère.
Once body 61 has been thoroughly cleaned (and assuming that a device of the type illustrated in Fig 1 is to be produced) the open-topped channels may be provided with the immobilised oligonucleotides 5 and the labelled oligonucleotides 6. For this purpose, the surface of the channel 62a (or at least the région thereof on which the oligonucleotides 5 are to be immobilised) may be treated to provide epoxy groups on the surface thereof. This may be effected, for example, by treatment of the surface with a glycidoxy compound of the formula:
(RO)3—Si-R1-O- CH3- CH-CH2
O where R is an alkyl group of 1 to 4 carbon atoms and R’ is an alkylene residue. Most preferably R is methyl and R’ is -(CH2)3-.
By way of example only, the following procedure may be used for immobilisation of an oligonucleotide by its 5' end.
The channels hâve applied thereto 5 -20 pl of 3-glycidoxypropropyl trimethoxy silane and are held at 50 °C for three hours under nitrogen. Subsequently the channels are washed with dry methanol and dry ether, under nitrogen. Cross linking is then performed at 50 °C for greater than 2 hours under nitrogen. Free hydroxyl groups may be capped with 20 pl of trimethyl chlorosilane in pyridine or similar anhydrous solvent solution for 2 hours at room température. The channels are then washed as described above. Oligonucleotides with a 5’-iodo-5’-deoxythymidine are reacted with sodium triphenyl methylmercaptile in DMF to produce an S-trityl compound. This is further reacted with diisopropylammo tetrazolide and 2-cyanoethoxy bis Ν,Ν-diisopropylamino phosphate in DCM to produce the cyanoethyl. The S-trityl group is removed by réduction methods known in the art ( Connolly, Nucleîc acid Research, 16,9,1988) before linking with the epoxy substituted channel using sodium hydride. In anhydrous DMF to effect condensation of the oligonucleotide to the epoxy group.
Alternatively the oligonucleotide may be immobilised by its 3' end using the following procedure.
The sodium sait of a DMT oligonucleotide can be prepared by dissolving the oligonucleotide in anhydrous DMF (dried over P2O5 ) under nitrogen with the addition of sodium hydride (1gram/10ml). The sodium hydride is then filtered off and the sodium sait of the oligonucleotide is reacted with the epoxy group in the channel. In anhydrous DMF
Further details of the above immobilisation chemistry are disclosed, for example, in US-A-5
910 406 (Tepnel).
In the case of either 3’- or 5’- immobilisation, the channels may then be washed with distilled water followed by washing in anhydrous éthanol and dried under nitrogen.
The second binding partner is dissolved in hybrisation buffer 2X SSC (300mM sodium chloride 30mM sodium citrate) and 0.1-0.9 molar ratio (compared to the immobilised oligonucleotide) is applied to the second channel and incubated at 20-40 °C for two hours. The channels are then washed in distilled water and éthanol under nitrogen. A pad of absorbent material (e.g. Whatman filter paper such as Whatman Grade GF/B Glass Microfiber Filters) is then applied to the sample well. If required, the pad may be pre-impregnated with any reagents required for the analysis. For certain embodiments of the invention, an absorbent pad (e.g. of the type described above) impregnated with a reagent system for developing a signal from the label may be introduced into the wells 64a and 64c to form détection régions for the device. Thus, in the case that the label is an enzyme requiring a substrate then a further pad of Whatman filter paper impregnated with the substrate for the enzyme is introduced into the wells 64a and 64c at the distal end of the capillaries. For other embodiments of the invention, e.g. In the case of fluorescence or chemiluninescence détection, the wells 64a and 64c remain free of paper to allow signal détection. Thus, for example, in the case of where the label is Horse Raddish Peroxidase, the well may contain luminol dried in situ as the substrate for the enzyme. In the case where the label is acridinium ester, the wells remain empty with the signal being provided by the acridinium ester per se. The channels are then sealed with tape or a plastic cover with UV curing adhesive forming closed capillaries.
The arrangement of Fig 7 comprises a bank of three assay devices 71 each produced from a body 61 of the type illustrated in Fig 6 and produced from optically transparent plastics material. These assay devices 71 each comprise an assay capillary tube 72a, a control capillary tube 72c, a sample receiving station (not illustrated in Fig 7 but referenced as 73 for convenience) and détection régions 74a and 74c for the assay capillary tube 72a and control capillary tube 72c respectively. Each assay capillary 72a is such as to assay for a different (potential) characteristic of a particular sample. Thus, for example, the assay capillary 72a of one device 71 may hâve immobilised oligonucleotides 5 with labelled oligonucleotides 7 hybridised thereto (as described with reference to Fig 1 ) to assay for the presence of a particular nucleic acid sequence in a sample. Another one of the assay devices 71 may hâve, in its assay capillary 72a, immobilised antibodies 45 with labelled antigen 46 bound thereto (as described with reference to Fig 4). The remaining assay device 71 may, for example, be such as to test for a different nucleic acid sequence, a different antigen or another characteristic as desired. The labels used in the assay devices 71 are such as to produce a light signal with reagent présent at the détection régions 74a and 74c.
The arrangement shown in Fig 7 additionally comprises a sample distribution unit 80 and a detector unit 90. Sample distribution unit 80 is structured so as to be capable of receiving, and supporting, three of the assay devices 71. The devices 71 are received in the unit 80 at their upstream ends, as illustrated in Fig 7, so that their sample receiving stations 73 are sealed within the unit 80. The sample distribution unit 80 has a sample inlet 81 and is internally configured (not shown) so that liquid sample introduced through the inlet 81 is transferred to the sample receiving stations 73 of ali three assay devices 71. A vent 82 is further provided for unît 80 so as to release excess pressure caused by the introduction of sample into the unit.
Detector unit 90 has three sets (only one shown) of four fibre optic light pipes 91a-d, each set being associated with a respective one of the assay devices 71. For convenience, only one set of the four light pipes 91a-d has been shown and this is for the uppermost of the three assay devices 71 shown in Fig 1. Light pipes 91a and 91 b lead into the upper régions of détection zones 74a and 74c respectively. Light pipes 91a and 91b are associated with a light source (not shown) in the detector which passes light along these pipes 91a and 91b into the top of détection régions 74a and 74b. In contrast, light pipes 91c and 91d lead from the detector 90 to the undersurfaces of détection régions 74a and 74c of the uppermost assay device 71. Each light pipe 91c and 91d is associated with a light detector (not shown) provided within the détection device.
For the purposes of carrying out an assay, liquid sample îs introduced through the inlet 81 of distribution unit 80 and the assay devices 71 function as previously described. Light that has passed from light pipes 91a and 91b into and through détection régions 74a and 74b is collected by the light pipes 91c and 91 d respectively and fed back to the detector 90. Detector 90 is programmed to detect any colour change in the light that has been passed along light tube 91a and collected by light tube 91c. Any such colour change is compared with the resuit from détection région 74c (control). Given there is a différence in colour change between détection région 74a (assay) and détection région 74c (control) then this is a “positive resuit for the assay.
Although Fig 7 has been described with reference to signal détection by light transmission (the détection régions being optically transparent) it will be appreciated that signal détection may also by réflectance, particularly in the case where the détection région incorporâtes an absorbent pad impregnated with a substrate for an enzyme.
A number of modifications may be made for the illustrated embodiments. For example, in the arrangement of Fig 7 the detector unit 90 is shown as a separate unit. It would however also be possible to produce an assay device in accordance with the invention incorporating its own détection unit. Power for such an “on-board” détection unit could, for example, be provided by a battery. Alternatîvely a power source for such a device may be as described in WO 00/33063 (Moorlodge Biotech Ventures Limited), in which case the power source will comprise at least one pair of électrodes of dissimilar materials provided on the device and arranged such that travel of an aqueous liquid sample between the électrodes causes a current to be generated for operating the détection arrangement. The dissimilar materials may comprise carbon or one or more metals, e.g. copper and zinc. The électrodes of one material may be interdigitated with those électrodes of another dissimilar material such that current, in the presence of liquid sample, may flow from one electrode to another.
In a further proposed modification, again applicable to the arrangement shown in Fig 7, the sample receiving région 73 may be emitted and the capillary tube 62a and 62c simply be open at their upstream ends. In this case, the liquid distribution arrangement 80 may comprise a sponge (or other absorbent material) provided at its interior, rear surface. On insertion of the assay device 7 into the distribution 8, the upstream end of the assay device 71 pushes into, and compresses, the sponge or other résilient material allowing the upstream ends of the capillary tube 62a and 62c to corne into contact therewith. For carrying out the assay, the sponge is impregnated with the liquid sample to be assayed, this liquid sample then passing into the capillary tubes 62a and 62c for analysis as described more fully above.
Fig 8 shows plan and side views of a further embodiment of assay device in accordance with the invention. This device is made of polycarbonate and has two serpentine capillaries (with five linear sections) each of which ru ns from an upstream sample well to a respective collection well containing a reagent System of the type described more fully above. Light pipes are associated with each collection wee for the purpose of signal détection.
By way of example, each capillary may have a total length of about 342mm. The individual capillaries may be of triangular cross-section with each side having a length 0.44mm. Each capillary has an approximate volume of 30 pl.
Although the invention has been described with spécifie reference to an assay device having one “assay capillary” and one “control capillary it will be appreciated that the device could include two or more “assay capillaries” and if necessary two or more “control capillaries”. Each such “assay capillary could be such as to perform the same or different assay on a sample.
The invention may be applied to the mass screening of sample and data about the results collected electronically for onward transmission to medical authorities who (from data supplied from a number of locations) can détermine the spread of an infection and/or coordinate medical supplies for dealing with the infection.
The invention will be illustrated by the following, non-limiting Examples.
Example 1
This Example describes the préparation of polycarbonate substrates having amino groups to which binding partners may be immobilised.
The procedure of this Example was effected on polycarbonate substrates (“platforms) having a size of about 75mm x 25mm x 3mm formed along their length with two open-topped, triangular section capillary channels each of serpentine configuration with five linear capillary pathways between the upstream and downstream ends of the serpentine the triangular section channels had sides of 0.4mm length. Each channel had a total length of about 342mm and a volume of about 30μΙ.
The platforms were initially nitrated by full emersion in 30% aqueous nitric acid solution at 80°C for 3hrs. Subséquent to this nitration reaction, the platforms were thoroughly washed with distilled water and air dried.
In the next step of the procedure, the platforms were treated with a 10% NaBH4w/v éthanol solution overnight at room température to effect réduction ofthe nitro groups to amino groups,
The platforms were then washed several times in distilled water, éthanol and Lectin Buffer (4M NaCI, 10mM Tris, pH7.2, 10mM CaCI2, 10mM MnCI2) with air drying between washes. Finally, the platforms were air dried.
Example 2
This Example describes production of an assay device in accordance with the invention in which yeast mannoprotein is immobilised within the capillary of a polycarbonate substrate and has labelled Concavalin A displaceably bound thereto.
Steo 1
Aminated polycarbonate platforms prepared in accordance with the procedure of Example 1 were reacted with an aqueous solution of 5rriM N-(3-dimethylaminopropyl)-N_-ethylcarbodiimide hydrochloride), 0.33mM N-hydroxysulfosuccinimide sodium sait 5mM 11-mercaptoundecanoic acid in a 0.1 M MES buffer pH6.5 for 3hrs and subsequently washed in Lectin Buffer. (MES is an abbreviation for the compound 2-(N-morpholino)ethanesulfonic acid).
After air drying, 1mg/ml yeast mannoprotein (in Lectin Buffer) was added to the capillaries in a humid atmosphère at 4°C and the substrate was allowed to stand over night. The platforms were then washed in Lectin Buffer.
This procedure produced polycarbonate platforms in which yeast mannoprotein was immobilised in the capillaries.
Step 2
This step describes the displaceable binding of labelled Concavalin A to the immobolised yeast mannoprotein of the polycarbonate platforms produced in the previous step. The label used was Horse Radish Peroxidase (HRP).
Concavalin A was biotinylated according to manufacturer's instructions (BiotinTag micro biotinylation kit, Sigma). Avidin-HRP was part of the kit. A 30pl mix of biotinylated Concavalin A/avidin-HRP/Lectin Buffer at 10/5/85 ratios was added on the capillary for 2hrs at RT in a humidified atmosphère. The treated platforms were then washed in Lectin Buffer and air dried.
An assay device in accordance with the invention was prepared by affixing adhesive plastics tape (water résistant adhesive) over the top of the capillary channels to complété the capillary tubes for the device.
Example 3
This Example describes production of an assay device in accordance with the invention in which yeast mannoprotein is immobilised within the capillary of a polycarbonate substrate and has labelled Concavalin A displaceably bound thereto.
Step 1
Aminated polycarbonate platforms prepared in accordance with the procedure of Example 1 were reacted with an aqueous solution of 5mM N-(3-dimethylaminopropyl)-N_-ethylcarbodiimide hydrochloride), 0.33mM N-hydroxysulfosuccinimide sodium sait 5mM 11-mercaptoundecanoic acid in a 0.1 M MES buffer pH6.5 for 3hrs and then washed in Lectin Buffer.
After air drying, 1mg/ml yeast mannoprotein (in an aqueous solution of 5mM N-(3dimethylaminopropyl)-N_-ethylcarbodiimide hydrochloride), 0.33mM N-hydroxysulfosuccinimide sodium sait in a 0.1 M MES buffer pH6.5 was added to the capillaries in a humidified atmosphère at 4°C and the platforms were allowed to stand overnight.
The treated platforms were washed in Lectin Buffer and air dried.
This step produced polycarbonate platforms in which yeast mannoprotein was immobolised in the capillaries.
Step 2
Using the procedure of Step 2 of Example 2, HRP-labelled Concavalin A was displaceably bound to the immobolised yeast mannoprotein of the platforms produced in accordance with Step 1 of this Example.
An assay device in accordance with the invention was prepared by affixing adhesive plastics tape (water résistant adhesive) over the top of the capillary channels to complété the capillary tubes for the device.
Example 4
This Example describes production of an assay device in accordance with the invention in which yeast mannoprotein is immobilised within the capillary of a polycarbonate substrate and has labelled Concavalin A displaceably bound thereto.
Step 1
Aminated polycarbonate platforms produced in accordance with the procedure of Example 1 were reacted with an aqueous solution of 5mM N-(3-dimethylaminopropyl)-N_-ethylcarbodiimide hydrochloride), 0.33mM N-hydroxysulfosuccinimide sodium sait 5mM 11-mercaptoundecanoic acid in a 0.1M MES buffer pH6.5, also containing 1mg/ml yeast mannoprotein in a humidified atmosphère at 4°C and allowed to stand overnight.
The treated platforms were then washed with Lectin Buffer and air dried.
The procedure of this Step produced polycarbonate platforms in which yeast mannoprotein was immobolised in the capillaries.
Step 2
Using the procedure of Step 2 of Example 2, HRP-labelled Concavalin A was displaceably bound to the yeast mannoprotein in the capillaries.
An assay device in accordance with the invention was prepared by affixing adhesive plastics tape (water résistant adhesive) over the top of the capillary channels to complété the capillary tubes for the device.
Example 5
This Example describes testing of the assay devices (with displaceably bound HRP-labelled Concavalin A) produced in accordance with Examples 2, 3 and 4 for displacement of the Concavalin A by either (i) a 20mg/ml yeast mannoprotein as a solution in Lectin Buffer, or (ii) 2mg/ml polystyrène beads (in Lectin Buffer) on which yeast mannoprotein had been immobolised.
The beads for test (ii) were prepared by the following procedure.
Protein Immobolisation on Carboxylated Polystyrène Beads
50μΙ of 10% solid to liquid carboxylated polystyrène 5 micron beads (Polymer labs) solution was washed once in 1ml of Lectin Buffer and then centrifuged (13,000rpm 5mins). Supernatant was removed and the beads were diluted in 1ml of an aqueous solution of 75mM N-(3dimethylaminopropyl)-N_-ethylcarbodiimide hydrochloride), 15mM NHSS (Nhydroxysulfosuccinimide sodium sait) and 50mM PBS at pH 7,3 with 2mg/ml of yeast mannoprotein. The mîx was shaken at room température for 3hrs and then washed; supernatant was then removed and the beads were further washed in Lectin Buffer prior to being separated by centrifugation (13,000rpm 5mîns). The beads were taken up in 1ml of Lectin Buffer and kept at 4°C.
Assay Procedure
The samples (i) 20mg/ml yeast mannoprotein, and (ii) 2mg/ml beads with conjugated yeast mannoprotein (both in Lectin Buffer) and were run by capillary action on the platforms produced in accordance with Examples 2, 3 and 4.
Liquid was allowed to run along the capillary pathway and 5μΙ were collected from the end of the capillary and added to 30μΙ of HRP substrate (from DRG Diagnostics estradiol ELISA kit) in an eppendorf. Colour was allowed to develop and samples were read at a spectrophotometer.
The results are shown in the following Table:
Example No. Sample loaded on platform (1ml), and absorbance at 446-456nm
Lectin Buffer 20mg/ml Yeast mannoprotein 2mg/ml Yeast mannoprotein conjugated beads
2 No peak Weak Colour 3.000 (456nm)
3 No peak 2.699 (448.5nm) 2.224 (446nm)
4 No peak 2.501 (446nm) Over 4.000 (446nm)
The results demonstrate that the yeast mannoprotein in the samples being assayed (i.e.
samples (i) and (ii)) was able to displace the Concavalin A that had been display sampling bound to the yeast mannoprotein that had been immobilised in the capillary pathway. Overall, the best results were obtained with the polycarbonate platform produced in accordance with Exampïe 4. In particular, the assay run on this platform using the yeast conjugated beads provided the best signal of all six combinations tested. The signal was considerably improved as compared to the assay run, on that platform, using the 20mg/ml solution of yeast mannoprotein, thus demonstrating signal amplification.
Example 6
This example provides a further démonstration of signal amplification
A number of assay devices were prepared as described in Example 4 and filter paper saturated in HYRP substrate and air dried was placed at the end of the capillary
The following fives test analytes were run on the devices using the assay:
1. 2mg/ml polystyrène beads with immobilised yeast mannoprotein, prepared as described in Exampïe 5.
2. 2mg/ml polystyrène beads with immobilised Concavalin A, prepared as described in Exampïe 5.but substîtuting 2mg/ml Concavalin A for the yeast mannoprotein.
3. 2mg/ml of free yeast mannoprotein
4. 2mg/ml free Concavalin A
5. 2mg/ml unconjugated beads,
6. lectin buffer
Both mannoprotein and Concavalin A conjugated to beads (ie test analytes 1 and 2) produced a visible blue signal on the filter paper, whereas free yeast mannoprotein, free Concavalin A, unconjugated beads and lectin buffer did not.
Exampïe 7
This Example demonstrates production of a polycarbonate platform in which an Oligonucleotide is immobilised in the capillary and has a labelled Oligonucleotide bound thereto.
Polycarbonate platforms were prepared using the procedure described in Example 1.
The aminated platforms were immersed in a solution of 5% glutaraldehyde v/v (0.1M PBS, pH6.5) and 5% Trimethylaminoborane in a beaker and placed in an ultrasonic bath for 2 hours at room température. The platforms were then washed extensively with éthanol and air dried.
Neisseria meningitides 5’NH ATTTTAATTACGAAGGCTACGCATT 3’ were dissolved in 0.1 M carbonate buffer pH 9.0 {0.1- 10um). 20μΙ of the solution was applied to the capillaries on the platform and allowed to react for 4 hours at room température in a wet atmosphère.
The platforms were then washed once in PBS and air dried.
The presence of the immobilised oligonucleotide was determined by applying an enzyme (alkaline phosphatase) labelled second oligonucleotide, for Neisseria meningitides
5’ Alkaline Phospatase GGAATTAATGCGTAGCCTTCGTAATTAAAAT3’ were added to the sample platform. Equimolar second oligonucleotide was incubated in the capillary for 10 minutes at room température in 1X SSC. The platform was then washed with 1XSSC. (A 20X stock solution consists of 3M sodium chloride and 300mM trisodium citrate (adjusted to pH7.0 with HCl.)
Substrate for Alkaline Phosphatase (NBT/BCIP) was the added to the capillary and a colour developed, demonstrating that the réaction was complété (linkage and hybridisation).

Claims (25)

  1. CLAIMS:
    1. An assay device for determining the presence and/or amount of an analyte présent or potentially présent in a liquid sample, the device comprising:
    (i) a capillary tube having an upstream région into which the sample to be assayed is introduced for transfer by capillary action along the capillary tube to a downstream région thereof;
    (ii) a collection of first binding partners immobilised within the capillary tube, said first binding partners being capable of specifically binding to the analyte;
    (iii) a collection of second binding partners displaceabley bound to a fraction of said first binding partners whereby there are free first binding partners immobilised within the capillary tube, said second binding partners having a label and being displaceable from the first binding partners by the analyte to be detected; and (iv) a détection région for sample that has transferred to said downstream région of said capillary tube, said détection région being adapted to generate a détectable signal from the label on displaced second binding partners that hâve transferred to the downstream région.
  2. 2. A device as claimed in claim 1 wherein 10-90% by mole of said first binding partners hâve said second binding partners bound thereto.
  3. 3. A device as claimed in claim 1 or 2 wherein the first binding partners are covalently immobilised within the capillary tube.
  4. 4. A device as claimed in any one of claims 1 to 3 wherein the first and second binding partners comprise nucleic acid sequences and the second binding partners comprise nucleic acid sequences hybridised thereto.
  5. 5. A device as claimed in claim 4 wherein the nucleic acid sequences of the first binding partners and the nucleic acid sequences of the second binding partners comprise DNA, RNA, mRNA or PNA sequences.
  6. 6. A device as claimed in any one of claims 1 to 3 wherein the first binding partners comprise antibodies and the second binding partners comprise antigens.
  7. 7. A device as claimed in any one of claims 1 to 3 wherein the first binding partner comprises a polysaccharide and the second binding partner comprises a lectin,
  8. 8. A device as claimed in any one of claims 1 to 7 wherein the détection région incorporâtes a reagent system which is capable of interacting with said label of the second binding partners to generate said détectable signal.
  9. 9. A device as claimed in claim 8 wherein the label is an enzyme and said reagent system comprises a substrate for the enzyme.
  10. 10. A device as claimed in claim 8 wherein said reagent system comprises an enzyme and said label is a substrate for the enzyme.
  11. 11. A device as claimed in any one of claims 8 to 10 wherein said label and said reagent System interact to produce a light signal.
  12. 12. A device as claimed in claim 11 wherein said light signal is a colour change.
  13. 13. A device as claimed in any one of claims 7 to 12 wherein the détection région comprises a well and the device is configured so that liquid exiting from a downstream end of the capillary is discharged into the well, said reagent system being présent in said well.
  14. 14. A device as claimed in any one of claims 1 to 13 additionally comprising a control capillary tube into which a portion of the sample is adapted to be introduced for transfer by capillary action along the,control capillary tube to a downstream région thereof, and a détection région for sample that has transferred to the downstream région of the control capillary tube, said control capillary tube being devoid of said second binding partners.
  15. 15. The combination of an assay device as claimed in any one of claims 1 to 14 with a détection arrangement for detecting said détectable signal.
  16. 16. The combination as claimed in claim 15 wherein the assay device is as defined in claim 10 or 11 and the détection arrangement is adapted to detect the light signal by light réflectance.
  17. 17. The combination as claimed in claim 16 wherein the assay device is as defined in claim 10 or 11 and the détection arrangement is adapted to detect the light signal by light transmission.
  18. 18. A method of assaying a liquid sample for determining the presence and/or amount of an analyte présent or potentially présent in the sample, the method comprising the steps of:
    (a) providing a capillary tube having immobilised therein a collection of first binding partners capable of specifically binding to the analyte, said capillary tube further incorporating a collection of second binding partners displaceabley bound to a fraction of said first binding partners whereby there are free first binding partners immobilised within the capillary tube, said second binding partners having a label and being displaceable from the first binding partners by the analyte to be detected;
    (b) causing the liquid sample to flow from an upstream end of the capillary tube to a downstream end thereof; and (c) detecting for the presence of the label at the downstream end of the capillary tube.
  19. 19. A method as claimed in claim 18 wherein 10-90% by mole of said first binding partners hâve said second binding partners bound thereto.
  20. 20. A method as claimed in claim 18 or 19 wherein the first binding partners are covalently immobilised within the capillary tube.
  21. 21. A method as claimed in any one of claims 18 to 20 wherein the first and second binding partners comprise nucleic acid sequences and the second binding partners comprise nucleic acid sequences hybridised thereto.
  22. 22. A method as claimed in claim 21 wherein the nucleic acid sequences of the first binding partners and the nucleic acid sequences of the second binding partners comprise DNA, mRNA, RNA or PNA sequences.
  23. 23. A method as claimed in any one of claims 18 to 20 wherein the first binding partners comprise antibodies and the second binding partners comprise antigens.
  24. 24. A method as claimed in any one of claims 18 to 20 wherein the first binding partners comprise a polysaccharide and the second binding partners comprise a lectin.
  25. 25. A method as claimed in claim 24 for the détection of an organism having surface lectins capable of displacing the labelled, lectin second binding partner.
OA1201300154 2010-11-24 2011-11-23 Device for dispensing a fluid at substantially constant pressure. OA16380A (en)

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Application Number Priority Date Filing Date Title
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