NZ793551A - Methods of using indazole-3-carboxamides and their use as wnt/b-catenin signaling pathway inhibitors - Google Patents
Methods of using indazole-3-carboxamides and their use as wnt/b-catenin signaling pathway inhibitorsInfo
- Publication number
- NZ793551A NZ793551A NZ793551A NZ79355117A NZ793551A NZ 793551 A NZ793551 A NZ 793551A NZ 793551 A NZ793551 A NZ 793551A NZ 79355117 A NZ79355117 A NZ 79355117A NZ 793551 A NZ793551 A NZ 793551A
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- DITBWPUMEUDVLU-UHFFFAOYSA-N 1H-indazole-3-carboxamide Chemical class C1=CC=C2C(C(=O)N)=NNC2=C1 DITBWPUMEUDVLU-UHFFFAOYSA-N 0.000 title abstract 4
- 239000003112 inhibitor Substances 0.000 title 1
- 230000002401 inhibitory effect Effects 0.000 title 1
- 230000019491 signal transduction Effects 0.000 title 1
- 150000003839 salts Chemical class 0.000 claims abstract 4
- 239000011780 sodium chloride Substances 0.000 claims abstract 4
- 208000002506 Darier Disease Diseases 0.000 claims abstract 3
- 206010023369 Keratosis follicular Diseases 0.000 claims abstract 3
- 201000004607 keratosis follicularis Diseases 0.000 claims abstract 3
- 206010021198 Ichthyosis Diseases 0.000 claims abstract 2
- 206010021197 Ichthyosis Diseases 0.000 claims abstract 2
- 208000003782 Raynaud Disease Diseases 0.000 claims abstract 2
- 206010037912 Raynaud's phenomenon Diseases 0.000 claims abstract 2
- 208000000491 Tendinopathy Diseases 0.000 claims abstract 2
- 201000004624 dermatitis Diseases 0.000 claims abstract 2
- 231100000406 dermatitis Toxicity 0.000 claims abstract 2
- 201000010099 disease Diseases 0.000 claims abstract 2
- 201000004681 psoriasis Diseases 0.000 claims abstract 2
- 125000001424 substituent group Chemical group 0.000 claims 10
- 150000004820 halides Chemical class 0.000 claims 9
- 125000006545 (C1-C9) alkyl group Chemical group 0.000 claims 7
- 125000000217 alkyl group Chemical group 0.000 claims 7
- 125000000876 trifluoromethoxy group Chemical group FC(F)(F)O* 0.000 claims 7
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 claims 5
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims 4
- 229940035295 Ting Drugs 0.000 claims 2
- 150000001875 compounds Chemical class 0.000 claims 2
- 125000004093 cyano group Chemical group *C#N 0.000 claims 2
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims 2
- 125000003118 aryl group Chemical group 0.000 claims 1
- 125000004452 carbocyclyl group Chemical group 0.000 claims 1
- 125000000623 heterocyclic group Chemical group 0.000 claims 1
- 230000001737 promoting Effects 0.000 abstract 2
- 230000029663 wound healing Effects 0.000 abstract 2
- 208000000185 Localized Scleroderma Diseases 0.000 abstract 1
- 206010027982 Morphoea Diseases 0.000 abstract 1
Abstract
This disclosure features the use of one or more indazole-3-carboxamide compounds or salts or analogs thereof, in the treatment of one or more diseases or conditions independently selected from the group consisting of a tendinopathy, dermatitis, psoriasis, morphea, ichthyosis, Raynaud's syndrome, and Darier's disease; and/or for promoting wound healing. The methods include administering to a subject (e.g., a subject in need thereof) a therapeutically effective amount of one or more indazole-3-carboxamide compounds or salts or analogs thereof as described anywhere herein. Darier's disease; and/or for promoting wound healing. The methods include administering to a subject (e.g., a subject in need thereof) a therapeutically effective amount of one or more indazole-3-carboxamide compounds or salts or analogs thereof as described anywhere herein.
Description
This sure features the use of one or more indazolecarboxamide compounds or salts or
s thereof, in the treatment of one or more diseases or conditions independently selected
from the group consisting of a tendinopathy, dermatitis, psoriasis, morphea, ichthyosis, Raynaud's
syndrome, and Darier's disease; and/or for promoting wound g. The methods include
administering to a subject (e.g., a subject in need thereof) a therapeutically effective amount
of one or more indazolecarboxamide compounds or salts or analogs thereof as described
anywhere herein.
NZ 793551
METHODS OF USING LECARBOXAMIDES AND THEIR USE
AS WNT/B-CATENIN ING PATHWAY INHIBITORS
RELATED APPLICATIONS
[001[ This application claims the benefit of US. Provisional Application No.
62/411,4?8, filed October 21, 2016, which is incorporated herein by reference in its entirety.
BACKGROUND
Technical Field
[002[ This disclosure features the use of one or more indazolecarboxamide
nds or salts or analogs thereof, in the treatment of one or more diseases or conditions
independently ed from the group consisting of a tendinopathy, dermatitis, psoriasis,
a, ichthyosis, Raynaud's syndrome, and Darier's disease, and/or for promoting wound
healing. The methods include administering to a subject (e.g., a subject in need thereof) a
therapeutically effective amount of one or more indazole -3 -carboxamide compounds or salts or
s thereof as described anywhere herein.
Background
[003[ Pattem formation is the activity by which embryonic cells form ordered
spatial arrangements of differentiated tissues. Speculation on the isms underlying these
patterning effects usually centers on the secretion of a signaling molecule that elicits an
appropriate response from the tissues being patterned. More recent work aimed at the
fication of such signaling molecules implicates secreted proteins encoded by individual
members of a small number of gene es.
[004[ The Wnt growth factor family includes more than 10 genes identified in
the mouse and at least 19 genes identified in the human. Members of the Wnt family of
signaling les mediate many important short-and long-range ning processes during
invertebrate and rate development. The Wnt signaling pathway is known for its important
role in the inductive interactions that regulate growth and differentiation, and plays important
roles in the homeostatic maintenance of post-embryonic tissue integrity. Wnt stabilizes
cytoplasmic B-catenin, which stimulates the expression of genes including c-myc, c jun, fra—l,
and cyclin D1. In addition, misregulation ofWnt signaling can cause developmental defects and
is implicated in the genesis of several human cancers. More recently, the Wnt pathway has been
implicated in the maintenance of stem or progenitor cells in a growing list of adult tissues that
now includes skin, blood, gut, prostate, muscle and the s system.
[005[ Pathological activation ofthe Wnt y is also believed to be the initial
event leading to colorectal cancer in over 85% of all sporadic cases in the Western world.
Activation ofthe Wnt y has also been extensively reported for hepatocellular oma,
breast cancer, ovarian , pancreatic cancer, melanomas, mesotheliomas, lymphomas and
leukemias. In addition to cancer, inhibitors of the Wnt y can be used for stem cell
research or for the treatment of any diseases characterized by aberrant Wnt activation such as
diabetic pathy, pulmonary fibrosis, rheumatoid arthritis, scleroderma as well as mycotic
and viral infections and bone and cartilage diseases. As such, it is a therapeutic target that is of
great interest to the field.
[006[ In addition to cancer, there are many cases of genetic es due to
mutations in Wnt signaling components. Examples of some of the many diseases are
Alzheimer's disease [Proc Natl. Acad. Sci. U S A , 104(22), 9434-9], osteoarthritis,
polyposis coli [Science (1991), 253(5020), 665-669], bone density and vascular defects in the
eye (osteoporosis-pseudoglioma syndrome, OPPG) [N Engl. J. Med. (2002), 346(20), 1513-
21], familial exudative vitreoretinopathy [Hum Mutat. (2005), 26(2), ], retinal
angiogenesis [Nat Genet. (2002), 32(2), 326-30], early coronary disease [Science (2007),
315(5816), 1278-82], tetra-amelia syndrome [Am J. Hum Genet. (2004), 74(3), 558-63],
Mullerian-duct regression and virilization [Eng]. J. Med. (2004), 351(8), 792-8], SERKAL
syndrome [Am J Hum Genet. (2008), 82(1), 39-47], diabetes mellitus type 2 [Am J Hum
Genet. (2004), 75(5), 832-43, N. Engl. J Med. (2006), 355(3), 241-50], Fuhrmann syndrome
[Am J Hum Genet. , 79(2), 402-8], Al-Awadi/Raas-Rothschild/Schinzel phocomelia
syndrome [Am J Hum Genet. , 79(2), 402-8], odonto-onycho-dermal dysplasia [Am J
Hum Genet. , 81(4), 821-8], obesity [Diabetologia , 49(4), 678-84], split-
hand/foot malformation [Hum Mol. Genet. (2008), , 2644-53], caudal ation
syndrome [Am J Hum Genet. (2006), 79(1), 155-62], tooth agenesis [Am J Hum Genet.
(2004), 74(5), 1043-50], Wilms tumor [Science (2007), 315(5812), 642-5], skeletal dysplasia
[Nat Genet. (2009), 41(1), ], focal dermal hypoplasia [Nat Genet. (2007), 39(7), 836-
8], mal recessive anonychia [Nat Genet. (2006), 38(11), 1245-7], neural tube defects [N
Eng]. J Med (2007), 356(1 4), 1432-7], alpha-thalassemia (ATRX) syndrome [The Journal of
Neuroscience (2008), 28(47), 12570 —125 80], fragile X me [PLoS Genetics (2010), 6(4),
e1000898], ICF syndrome, Angelman syndrome [Brain Research Bulletin (2002), 57(1), 109-
119], Prader-Willi syndrome [Journal ofNeuroscience (2006), 26(20), 392], Beckwith-
Wiedemann me [Pediatric and Developmental Pathology (2003), 6(4), 299-306] and
Rett syndrome.
[007[ Regulation of cell signaling by the Wnt signaling pathway is critical for
the formation ofneuronal circuits. Wnt pathway modulates in neural tissue, among other things,
axon pathfinding, dendritic development, and synaptic assembly. Through different receptors,
Wnt pathway activates and/or regulates diverse ing pathways and other processes that
lead to local changes on the cytoskeleton or global ar changes involving nuclear fill’lCthl’l.
Recently, a link between neuronal activity, essential for the formation and refinement of
al connections, and Wnt signaling has been red. Indeed, neuronal activity
regulates the release of various Wnt proteins and the localization of their receptors. Wnt
pathway mediates synaptic structural changes induced by neuronal activity or experience.
Evidence suggests that dysfiinction in Wnt signaling contributes to neurological disorders
[Brain Research Reviews (2000), 33(1), 1—12, ne (2006) 25(5 7), 7545-7553, Molecular
Neuroclegeneraiion (2008), 3, 9, Neurobiology ofDisease (2010), 38(2), 148—153, Journal of
Neurodevelopmenial Disorders (2011), 3(2), 162—174 and Cold Spring Harbor Perspectives in
y February (2012), 4(2)].
[008[ Tendinopathies are chronic ers or es of the tendons, that
typically result from gradual wear and tear to the tendon, e.g., from overuse or aging, and
leading to is tendon degeneration, weakness, tearing, and pain. Individuals who tend to make
multiple, repeated motions in their jobs, sports, or regular daily activities tend to be more likely
to develop tendinopathies. Tendinopathy usually causes pain, stiffness, and loss of strength in
the affected area.
[009[ Skin disorders are common afflictions for many people. Some of the most
common are dermatitis (also known as eczema) and psoriasis. Both itis and psoriasis
can cause serious physical and/or psychological suffering to the subject less of the
location on the body that these conditions occur.
[010[
and their use as Wnt/B-catenin signaling y inhibitors.
0 /
R4 NH
R‘ (I)
SUMMARY
[011[ This disclosure features the use of one or more indazolecarboxamide
nds or salts or analogs thereof, in the treatment of one or more diseases or conditions
independently ed from the group ting of a tendinopathy, dermatitis, psoriasis,
a, ichthyosis, Raynaud's syndrome, and Darier's disease, and/or for promoting wound
healing. The methods include administering to a subject (e.g., a subject in need thereof) a
therapeutically effective amount of one or more indazole-3 -carboxamide compounds or salts or
analogs thereof as described anywhere herein.
[012[ One ment disclosed herein es administering an indazole
carboxamide compound having the structure of Formula 1:
o /
R4 NH
R2 N
as well as prodrugs and pharmaceutically acceptable salts thereof.
[013[ In some embodiments of Formula (1):
R1, R2 and R4 are independently selected from the group ting of H, C1.9 alkyl,
halide, —N(R10)2, —XR10, CN, —OCF3 and —CF3,
R3 is selected from the group ting of carbocyclle6, heterocyclle6, arle6 and
heteroarle6,
R5 is selected from the group consisting of -(C1-9 alkyl)ncarbocyclle7, -(C1-9
alkyl)nheterocyclle7, -(C1_9 alkyl)narle7 and -(C1_9 alkyl)nheteroarle7,
each R6 is 1-5 substituents each selected from the group consisting of H, C1_9 alkyl,
halide, amino, -OCF3, -CF3, -CN, -XR10, -(C1-9 alkyl)ncarbocyclle8, -(C1-9
alkyl)nheterocyclle8, -(C1_9 alkyl)narle8, -(C1_9 alkyl)nheteroarle8, -C(=O)R11, -
N(R10)C(=O)R“, -(C1_9 alkyl)nN(R10)2, -(C1_9 alkyl)nN(R10)SOZR“ and -SOzR11,
each R7 is 1-5 substituents each selected from the group consisting of H, C1_9 alkyl,
halide, amino, -OCF3, -CF3, -CN, -XR10, -(C1_9 alkyl)ncarbocyclle9, -(C1_9
nheterocyclle9, -(C1_9 alkyl)narle9, -(C1_9 alkyl)nheteroarle9, -C(=O)R11, -
N(R10)C(=O)R”, -(C1_9 nN(R10)2, -(C1_9 alkyl)nN(R10)SOZR11 and -SOzR”,
each R8 is 1-5 substituents each selected from the group consisting of H, C1_3 alkyl,
halide, amino, OCF3, -CF3 -CN, -XR12, -C(=O)R13, -N(R12)C(=O)R13, -(C1_9 alkyl)nN(R12)2, -
(C1_9 alkyl)nN(R12)SOZR13 and -SOle3,
each R9 is 1-5 substituents each selected from the group consisting of H, C1_3 alkyl,
halide, amino, -OCF3, -CF3 -CN, -XR12, Rl3, -N(R12)C(=O)R13, -(C1.9alkyl)nN(R12)2, -
(C1_9 nN(R12)SOZR13 and -SOle3,
each R10 is independently ed from the group consisting of H, C1.9 alkyl, -(C1-9
alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclle8, -(C1_9 alkyl)nheterocyclle8, -(C1_9 alkyl)narle8 and
-(C1_9 alkyl)nheteroarle8,
each R11 is independently selected from the group consisting of C1_9 alkyl, -N(R14)2, -
(C1.9 alkyl)ncarbocyclle8, -(C1-9 alkyl)nheterocyclle8, -(C1-9 alkyl)narle8 and -(C1-9
alkyl)nheteroarle8,
each R12 is independently selected from the group consisting of H, C1.9 alkyl, -(C1-9
alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclyl, -(C1-9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9
alkyl)nheteroaryl,
each R13 is independently selected from the group ting of C1_9 alkyl, -N(R14)2, -
(C1.9 alkyl)ncarbocyclyl, -(C1-9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9 alkyl)nheteroaryl,
each R14 is independently selected from the group consisting of H, C1_3 alkyl,
yclyl and aryl,
each X is ed from the group consisting of a bond, and -S-, and
eachn is 0 or 1.
[014[ In another embodiment of Formula (1):
R1, R2 and R4 are independently selected from the group consisting of H, C1_9 alkyl,
halide, -N(R10)2, -XR10, CN, -OCF3 and -CF3,
R3 is selected from the group consisting of carbocyclle6, heterocyclle6, arle6 and
heteroarle6,
in some embodiments, it is provided that when R3 is heteroaryl, the heteroaryl is not
selected from the group consisting of isoquinoline, lH-pyrrolo[2,3-c]pyridine and tetrazole,
R5 is selected from the group consisting of -(C1-9 ncarbocyclle7, -(C1-9
alkyl)nheterocyclle7, -(C1_9 narle7 and -(C1_9 alkyl)nheteroarle7,
in some embodiments, it is provided that R5 is not 4-pyridle7 when R1, R2 and R4 are
H, R3 is selected from the group consisting of 3-pyridle6, 4-pyridle6, 2-pyridle6, phenle6,
"Jun,H 0
Hmfi‘iN/ 6/15 H0 \ Lg
leR6, imidazoleR6,pyrimidineR6, oxazoleRé, N / / N
, ,
F :1WY W °
o “I /.
Fiji \ M "\ N5 "W?
N/ M N/ N/ N/
3 3 3 3 3 3
(1 ° \ ‘7’”? U \ N \ a
H .
CI N and N and R6 and R7 are both H.
3 ,
in some ments, it is provided that R5 is not —(CH2)(3-pyridyl)R7 when R1, R2
and R4 are H, R3 is selected from the group consisting of 3-pyridle6, 4-pyridle6 and
thiazoleR6, and R6 and R7 are both H,
in some embodiments, it is provided that R5 is not phenle7 when R1, R2 and R4 are H,
R3 is 4-pyridle6 and R6 and R7 are both H,
in some embodiments, it is provided that R3 is not dle6 when R1, R2 and R4 are
gig,0‘ ,0 is selected from the group consisting of phenle7, it
H, R5
0‘:01?
LED/FsozuH2 cu
LL; sozun2 300WHO E/©:CI
":2 54,,33 ii}F
‘eI)“ and R6 and R7 are both H,
in some embodiments, it is ed that R3 is not oxazoleR6 when R1, R2 and R4 are
J: :L \
N N\/
H, R5 is selected from the group consisting of c" p and ‘7{©\/ ‘/
and R6 is H,
in some embodiments, it is provided that R3 is not thiazoleR6 when R1, R2 and R4 are
H, R5 is selected from the group consisting of and v, and R6
is H,
each R6 is 1-5 substituents each selected from the group consisting of H, C1_9 alkyl,
halide, amino, -OCF3, -CF3, -CN, -XR10, -(C1-9 alkyl)ncarbocyclle8, -(C1-9
alkyl)nheterocyclle8, -(C1_9 narle8, -(C1_9 alkyl)nheteroarle8, -C(=O)R11, -
N(R10)C(=O)R”, -(C1_9 alkyl)nN(R10)2, -(C1_9 alkyl)nN(R10)SOZR11 and -SOzR“,
each R7 is 1-5 substituents each selected from the group consisting of H, C1_9 alkyl,
halide, amino, -OCF3, -CF3, -CN, -XR10, -(C1-9 alkyl)ncarbocyclle9, -(C1-9
alkyl)nheterocyclle9, -(C1_9 alkyl)narle9, -(C1_9 alkyl)nheteroarle9, -C(=O)R11, -
N(R10)C(=O)R”, -(C1_9 alkyl)nN(R10)2, -(C1_9 alkyl)nN(R10)SOZR11 and -SOzR“,
each R8 is 1-5 substituents each selected from the group consisting of H, C1_3 alkyl,
halide, amino, OCF3, -CF3 -CN, -XR12, -C(=O)R13, -N(R12)C(=O)R13, -(C1_9 alkyl)nN(R12)2, -
(C1_9 alkyl)nN(R12)SOZR13 and ,
each R9 is 1-5 substituents each selected from the group consisting of H, C1_3 alkyl,
halide, amino, -OCF3, -CF3 -CN, -XR12, -C(=O)Rl3, )C(=O)R13, -(C1.9alkyl)nN(R12)2, -
(C1_9 nN(R12)SOZR13 and -SOle3,
each R10 is independently selected from the group consisting of H, C1.9 alkyl, -(C1-9
alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclle8, -(C1_9 alkyl)nheterocyclle8, -(C1-9 alkyl)narle8 and
-(C1-9 alkyl)nheteroarle8,
each R11 is independently selected from the group consisting of C1_9 alkyl, -N(R14)2, -
(C1.9 alkyl)ncarbocyclle8, -(C1-9 alkyl)nheterocyclle8, -(C1-9 alkyl)narle8 and -(C1-9
alkyl)nheteroarle8,
each R12 is independently ed from the group ting of H, C1.9 alkyl, -(C1-9
alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclyl, -(C1-9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9
nheteroaryl,
each R13 is independently selected from the group consisting of C1_9 alkyl, -N(R14)2, -
(C1.9 ncarbocyclyl, -(C1-9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9 alkyl)nheteroaryl,
each R14 is independently selected from the group consisting of H, C1_3 alkyl,
carbocyclyl and aryl,
each X is selected from the group ting of a bond, and -S-, and
eachn is 0 or 1.
[015[ Some embodiments include administering stereoisomers and
pharmaceutically acceptable salts of a compound of general Formula (I).
[016[ Some embodiments include administering pro-drugs of a compound of
general Formula (I).
[017[ Some embodiments e administering pharmaceutical compositions
comprising a nd of general Formula (I) or in a pharmaceutically acceptable carrier,
diluent, or ent.
[018[ It is to be understood that both the foregoing general description and the
following detailed description are exemplary and explanatory only and are not restrictive ofthe
ion, as claimed.
BRIEF DESCRIPTION OF THE FIGURES
[019[ depicts a plot showing that exposure of a human ctal cancer
cell line (SW480) to compound 175 inhibited Wnt/B-catenin activity in these cells in a dose-
dependent manner (EC50= 152.9 nM). The human ctal cancer cell line (SW480) with
constitutive tion of the Wnt pathway and engineered to express a Wnt responsive
promoter linked to luciferase were treated with compound 175 at test concentrations of 10, 3,
1, 0.3, 0.1, 0.03, 0.01, 0.003, 0.001 and 0.0003 uM.
[020[ FIGS. 2A-C depict plots of the percentage of human mesenchymal stem
cells (hMSC) expressing SCXA, tenacinC, and tenomodulin, respectively vs. concentration of
compound 175. Human Mesenchymal Stem Cells were treated with compound 175 at test
concentrations of 750, 333.3, 166.6, 83.3, 41.7, 21.7, 10.8 and 5.8 nM. Exposure ofthe cells
to compound 175 for 7 days induced the expression of markers of tenocyte differentiation-
SCXA, TenacinC and Tenomodulin in a dose-dependent manner (EC50= 139- 189 nM).
[021[ are images ofthe expression of SCXA, tenacinC, and tenomodulin
in hMSCs d with DMSO, bone morphogenic protein (BMP) and fibroblast growth factor
(FGF), and compound 175 at 333 nM concentration.
[022[ FIGS. 4A-B depict plots of tumor necrosis factor alpha concentration in
THP-1 cells vs. the logarithm of the concentration of compound 175 the THP-1 cells were
eXposed to, and interleukin-6 concentration in THP-1 cells vs. the logarithm of the
concentration of compound 175 the THP-1 cells were eXposed to, respectively. THP-1 cells, a
human monocyte cell line (6 X 10e4 cells/well in a 96-well plate) were treated with DMSO
(vehicle) or compound 175 at trations of 10, 3.5, 1, 0.5, 0.1, 0.035, 0.01, 0.005 uM.
After 2 hours, treated cells were stimulated with LPS (50 ng/mL for 5 hours [TNFa] and 500
ng/ml for 22 hours [IL6]) at 37°C to induce production ofthe cytokines. Supematants (diluted
1:1 or 1:4) were collected and analyzed for TNFa and IL6 levels using the TNFa and IL6
ELISA kits. Inhibition profile and EC50 was calculated using Prism 5. Representative images
te that eXposure ofthe cells to compound 175 inhibited the production of TNFa (4A) and
IL6 (4B) in THP-1 cells in a dose-dependent manner, with an average EC50 of 342 - 547 nM
for TNFa and 356 - 629 nM for IL6 (2 independent assays and 3 replicates per assay).
[023[ is a grid of images of a rat Achilles tendon, a rat Achilles tendon
treated with a collagenase with a vehicle, a rat Achilles tendon treated with a enase,
compound 175, and benzyl alcohol, and a rat Achilles tendon treated with a collagenase and
nd 175. Tendinopathy in rats was induced by injecting collagenase (50 pl, 10 mg/ml
Type IA in PBS, pH 7.4, ~469 units/mg) or sham needle puncture for control in the Achilles
tendon. After 1 day, rats were dosed once daily for 21 days via topical application with vehicle
control or compound 175 (10 . 24 hours after the last dose, tendons were isolated, fixed
with 10% buffered formalin, sectioned and stained with H&E. Group 1 (sham injection), Group
2 (Collagenase-Vehicle), Group 3 (Collagenase-compound 175 with 1% BA) and Group 4
(Collagenase-compound 175 with 0.5% Tween 80, t BA).
[024[ is a plot of tendon histology scores of rat Achilles tendon, a rat
Achilles tendon treated with a collagenase with a vehicle, a rat Achilles tendon treated with a
enase, compound 175, and benzyl l, and a rat Achilles tendon treated with a
collagenase and compound 175. Tendinopathy in rats was d by injecting collagenase
(50 pl, 10 mg/ml Type IA in PBS, pH 7.4, ~469 units/mg) or sham needle puncture for control
in the es tendon. After 1 day, rats were dosed once daily for 21 days via topical
ation with e l or compound 175 (10 mg/ml). 24 hours after the last dose,
tendons were isolated, fixed with 10% buffered formalin, sectioned and stained with H&E.
Group 1 (sham injection), Group 2 (Collagenase-Vehicle), Group 3 (Collagenase-compound
175 with 1% BA) and Group 4 (Collagenase-compound 175 with 0.5% Tween 80, without BA).
Blinded ogy scoring oftendon injury and inflammation indicated that nd 175 with
or t BA preservative significantly ameliorated collagenase-induced tendinopathy
(**p<0.01 and *p<0.05 respectively) by student’s t test. For this study, a total of 64 sections
were scored for Group 1 and ~96 sections each for Group 2-4.
[025[ is series of plots of plasma concentrations of KC/GRO in rats vs.
the number of days elapsed after administration of a vehicle, compound 175 with benzyl
alcohol, and compound 175. Tendinopathy in rats was induced by injecting collagenase (50 pl,
mg/ml Type IA in PBS, pH 7.4, ~469 units/mg) in the Achilles tendon. After 1 day, rats
were dosed once daily for 21 days via topical application with vehicle control or nd 175
(10 mg/ml). Blood was collected at various timepoints and plasma was analyzed for KC/GRO
by ELISA. Measurement of inflammatory cytokine KC/GRO in the plasma of rats from Group
2 (Collagenase-Vehicle), Group 3 genase-compound 175 10 mg/mL with 1% BA) and
Group 4 (Collagenase- compound 175 10 mg/mL without BA, with 0.5% Tween 80).
Compound 175 with or t BA preservative significantly decreased the levels of KC/GRO
in plasma (p<0.05, student’s t test as indicated in Error! Reference source not ),
indicating an anti-inflammatory effect of compound 175. These data were generated from 3
replicates per timepoint per group (n=3).
[026[ is a grid of images of a rat Achilles tendon, a rat Achilles tendon
treated with a collagenase with a vehicle, a rat Achilles tendon treated with a collagenase, 3
mg/ml compound 175, and benzyl alcohol, a rat Achilles tendon treated with a collagenase, 10
mg/ml compound 175 and benzyl alcohol, a rat Achilles tendon treated with a enase, 3
mg/ml compound 175, and PhX, and a rat Achilles tendon treated with a collagenase, 10 mg/ml
compound 175, and PhX. Tendinopathy in rats was d by injecting enase (50 pl, 10
mg/ml Type IA in PBS, pH 7.4, ~469 units/mg) or sham needle puncture for control in the
Achilles tendon. After 1 day, rats were dosed once daily for 21 days via topical application with
vehicle or compound 175 topical formulations. 24 hours after the last dose, tendons were
isolated, fixed with 10% buffered formalin, sectioned and d with H&E. Group 1 (sham
injection), Group 2 (Collagenase-Vehicle with 0.5% PhX), Group 3 (Collagenase-compound
175 3 mg/ml with 0.5% BA), Group 4 (Collagenase-compound 175 10 mg/ml with 0.5% BA),
Group 5 (Collagenase-compound 175 3 mg/ml with 0.5% PhX) and Group 6 (Collagenase-
COMPOUND 175 10 mg/ml with 0.5% PhX).
[027[ is a plot of tendon histology scores of a rat Achilles , a rat
Achilles tendon treated with a collagenase with a vehicle, a rat Achilles tendon treated with a
collagenase, 3 mg/ml compound 175, and benzyl alcohol, a rat es tendon treated with a
collagenase, 10 mg/ml compound 175, and benzyl alcohol, a rat Achilles tendon treated with a
collagenase, 3 mg/ml compound 175, and PhX, and a rat Achilles tendon treated with a
collagenase, 10 mg/ml compound 175, and PhX. opathy in rats was induced by ing
collagenase (50 pl, 10 mg/ml Type IA in PBS, pH 7.4, ~469 units/mg) or sham needle puncture
for control in the Achilles tendon. After 1 day, rats were dosed once daily for 21 days via topical
application with vehicle or COMPOUND 175 topical formulations. 24 hours after the last dose,
tendons were isolated, fixed with 10% buffered formalin, sectioned and stained with H&E.
Group 1 (sham injection), Group 2 (Collagenase-Vehicle with 0.5% PhX), Group 3
(Collagenase-compound 175 3 mg/ml with 0.5% BA), Group 4 (Collagenase-compound 175
mg/ml with 0.5% BA), Group 5 (Collagenase-compound 175 3 mg/ml with 0.5% PhX) and
Group 6 (Collagenase- compound 175 10 mg/ml with 0.5% PhX). d histology scoring of
tendon injury and inflammation indicates that nd 175 at both 3 and 10mg/mL, with
either BA or PhX as a vative, significantly ameliorated collagenase-induced tendinopathy
(**p<0.01 and ***p<0.001) by student’s ttest. For this study, atotal of 94 sections were scored
for Group 1 and 92-116 sections for Groups 2-6.
[028[ is series of plots of plasma concentrations of KC/GRO in rats vs.
the number of days elapsed after stration of a vehicle, 3 mg/ml COMPOUND 175 with
benzyl alcohol, 10 mg/ml COMPOUND 175 with benzyl alcohol, 3 mg/ml COMPOUND 175
with PhX, and 10 mg/ml compound 175 with PhX. Tendinopathy in rats was induced by
injecting collagenase (50 pl, 10 mg/ml Type IA in PBS, pH 7.4, ~469 units/mg) in the Achilles
tendon. After 1 day, rats were dosed once daily for 21 days via topical application with vehicle
l or topical compound 175. Blood was collected at various timepoints and plasma was
analyzed for KC/GRO by ELISA. Measurement of inflammatory cytokine KC/GRO in the
plasma of rats from Group 2 (Collagenase -Vehicle containing 0.5% Phx), Group 3
(Collagenase-compound 175 3 mg/mL with 0.5% BA), Group 4 (Collagenase— compound 175
mg/mL with 0.5% BA), Group 5 (Collagenase—compound 175 3 mg/mL with 0.5% PhX)
and Group 6 (Collagenase—compound 175 10 mg/mL with 0.5% PhX). Compound 175 at both
3 and 10mg/mL dose concentrations, with either BA or PhX as preservative icantly
decreased the levels of KC/GRO in plasma compared to vehicle (p<0.05 and p<0.01, student’s
t test as indicated in Table 5), indicating an anti-inflammatory effect of compound 175. These
data were generated from 3 replicates per timepoint per group (n=3).
[029[ is a series of plots of compound 175 concentrations vs. time in
Sprague-Dawley rat tendons, plasma, and skin after atopical ation of 1 mg/mL compound
175 and benzyl alcohol, 10 mg/mL compound 175 and benzyl alcohol, and 10 mg/mL
compound 175.
DETAILED DESCRIPTION
[030[ This disclosure features the use of one or more indazolecarboxamide
compounds or salts or s thereof, in the treatment of one or more diseases or conditions
independently selected from the group consisting of a tendinopathy, dermatitis, psoriasis,
morphea, ichthyosis, d's syndrome, and Darier's disease; and/or for promoting wound
healing. The methods include stering to a subject (e.g., a subject in need thereof) a
therapeutically effective amount of one or more indazole-3 -carboxamide compounds or salts or
analogs thereof as bed anywhere herein.
Definitions
[031[ Unless defined otherwise, all technical and scientific terms used herein
have the same meaning as is commonly understood by one of ry skill in the art to which
this disclosure belongs. All patents, applications, published applications, and other publications
are incorporated by reference in their entirety. In the event that there is a plurality of definitions
for a term herein, those in this section prevail unless stated otherwise.
[032[ In this ication and in the claims, the following terms have the
meanings as defined. As used herein, "alkyl" means a branched, or straight chain chemical
group containing only carbon and en, such as methyl, ethyl, n-propyl, pyl, n-butyl,
isobutyl, tyl and pentyl. Alkyl groups can either be unsubstituted or substituted with one
or more substituents, e.g., halide, alkoxy, acyloxy, amino, amido, cyano, nitro, hydroxyl,
mercapto, y, carbonyl, benzyloxy, aryl, heteroaryl, or other fimctionality that may be
suitably d, if ary for purposes of the invention, with a protecting group. Alkyl
groups can be saturated or unsaturated (e.g., containing -C=C- or -CEC- subunits), at one or
several positions. Typically, alkyl groups will comprise l to 9 carbon atoms, ably 1 to 6,
more preferably 1 to 4, and most preferably 1 to 2 carbon atoms.
[033[ As used herein, “carbocyclyl” means a cyclic ring system containing only
carbon atoms in the ring system backbone, such as cyclopropyl, cyclobutyl, cyclopentyl,
cyclohexyl, and cyclohexenyl. Carbocyclyls may include multiple filSCd rings. yclyls
may have any degree of saturation provided that at least one ring in the ring system is not
aromatic. Carbocyclyl groups can either be unsubstituted or substituted with one or more
substituents, e.g., alkyl, halide, alkoxy, acyloxy, amino, amido, cyano, nitro, hydroxyl,
mercapto, y, yl, benzyloxy, aryl, heteroaryl, or other fimctionality that may be
suitably blocked, ssary for purposes ofthe invention, with a protecting group. Typically,
carbocyclyl groups will comprise 3 to 10 carbon atoms, preferably 3 to 6.
[034[ As used herein, “lower alkyl” means a subset of alkyl having 1 to 3 carbon
atoms, and thus is a hydrocarbon substituent, which is linear, or branched. Examples of lower
alkyl include methyl, ethyl, n-propyl and isopropyl. Likewise, radicals using the terminology
“lower” refer to radicals preferably with l to about 3 carbons in the alkyl portion ofthe radical.
[035[ As used herein, “amido” means a H-CON- or alkyl-CON—, carbocyclyl-
CON—, ON—, aryl-CON- or heterocyclyl-CON group wherein the alkyl,
carbocyclyl, aryl or heterocyclyl group is as herein described.
[036[ As used , “aryl” means an aromatic radical having a single -ring (e.g.,
phenyl) or multiple condensed rings (e.g., naphthyl or anthryl) with only carbon atoms present
in the ring backbone. Aryl groups can either be unsubstituted or substituted with one or more
substituents, e.g., alkyl, amino, cyano, hydroxyl, lower alkyl, kyl, alkoxy, nitro, halo,
mercapto, and other substituents. A preferred carbocyclic aryl is phenyl.
[037[ As used herein, the term “heteroaryl” means an aromatic radical having
one or more heteroatom(s) (e.g., N, O, or S) in the ring backbone and may include a single ring
(e.g., ne) or multiple condensed rings (e.g., quinoline). Heteroaryl groups can either be
unsubstituted or substituted with one or more substituents, e.g., amino, cyano, hydroxyl, lower
alkyl, haloalkyl, alkoxy, nitro, halo, mercapto, and other substituents. Examples of heteroaryl
include thienyl, pyridinyl, fierl, oxazolyl, oxadiazolyl, pyrrolyl, imidazolyl, triazolyl,
azolyl, pyrazolyl, isoxazolyl, thiadiazolyl, l, pyrazinyl, pyrimidinyl, pyridazinyl,
triazinyl, thiazolyl benzothienyl, benzoxadiazolyl, benzofuranyl, benzimidazolyl,
benzotriazolyl, cinnolinyl, indazolyl, indolyl, isoquinolinyl, isothiazolyl, naphthyridinyl,
purinyl, thienopyridinyl, pyrido[2,3-d]pyrimidinyl, pyrrolo[2,3-b]pyridinyl, quinazolinyl,
quinolinyl, thieno[2,3-c]pyridinyl, pyrazolo[3,4-b]pyridinyl, pyrazolo[3,4-c]pyridinyl,
pyrazolo[4,3-c]pyridine, pyrazolo[4,3-b]pyridinyl, olyl, and others.
[038[ In these definitions it is clearly contemplated that substitution on the aryl
and heteroaryl rings is within the scope of certain embodiments. Where substitution occurs, the
radical is called substituted aryl or substituted heteroaryl. ably one to three and more
preferably one or two substituents occur on the aryl ring. Though many substituents will be
, preferred substituents include those commonly found in aryl compounds, such as alkyl,
cycloalkyl, hydroxy, alkoxy, cyano, halo, haloalkyl, mercapto and the like.
[039[ As used , “amide” includes both - (in the case ofR = alkyl,
alkaminocarbonyl-) and RCONR’- (in the case of R = alkyl, alkyl carbonylamino-).
[040[ As used herein, the term “ester” includes both ROCO- (in the case of R =
alkyl, carbonyl-) and RCOO- (in the case of R = alkyl, alkylcarbonyloxy-).
[041[ As used herein, "acyl" means an H-CO- or alkyl-CO-, carbocyclyl-CO-,
aryl-CO-, heteroaryl-CO- or heterocyclyl-CO- group n the alkyl, carbocyclyl, aryl or
heterocyclyl group is as herein described. Preferred acyls contain a lower alkyl. Exemplary
alkyl acyl groups e formyl, acetyl, propanoyl, 2-methylpropanoyl, t-butylacetyl, butanoyl
and palmitoyl.
[042[ As used herein, "halo”, “halide” or “halogen” is a chloro, bromo, fluoro or
iodo atom radical. , bromo and fluoro are red halides. Most red halide is
fluorine.
[043[ As used , "haloalkyl" means a hydrocarbon substituent, which is
linear or branched or cyclic alkyl, alkenyl or alkynyl substituted with chloro, bromo, fluoro or
iodo atom(s). Most preferred of these are lkyls, wherein one or more of the hydrogen
atoms have been tuted by fluoro. Preferred haloalkyls are of l to about 3 carbons in length,
more preferred haloalkyls are l to about 2 s, and most preferred are 1 carbon in length.
The skilled artisan will recognize then that as used herein, "haloalkylene" means a cal
variant of haloalkyl, such diradicals may act as spacers between radicals, other atoms, or
between the parent ring and another fiinctional group.
[044[ As used herein, “heterocyclyl” means a cyclic ring system comprising at
least one heteroatom in the ring system backbone. Heterocyclyls may include multiple filSCd
rings. Heterocyclyls may have any degree of saturation provided that at least one ring in the
ring system is not aromatic. Heterocyclyls may be tuted or unsubstituted with one or more
substituents, e.g., alkyl, halide, alkoxy, acyloxy, amino, amido, cyano, nitro, hydroxyl,
mercapto, carboxy, carbonyl, benzyloxy, aryl, heteroaryl, and other substituents, and are
attached to other groups via any available valence, preferably any available carbon or nitrogen.
More preferred heterocycles are of 5-7 s. In siX membered monocyclic heterocycles,
the atom(s) are selected from one up to three of O, N or S, and wherein when the
heterocycle is five membered, preferably it has one or two atoms selected from O, N, or
S. Examples of heterocyclyl include azirinyl, aziridinyl, azetidinyl, oxetanyl, thietanyl, 1,4,2-
dithiazolyl, nzodioxolyl, dihydroisoindolyl, dihydroisoquinolinyl, dihydrocinnolinyl,
dihydrobenzodioxinyl, dihydro[l,3]oxazolo[4,5-b]pyridinyl, benzothiazolyl, dihydroindolyl,
dihydropyridinyl, l,3-dioxanyl, l,4-dioxanyl, l,3-dioxolanyl, isoindolinyl, morpholinyl,
thiomorpholinyl, piperazinyl, pyranyl, pyrrolidinyl, tetrahydrofierl, tetrahydropyridinyl,
oxazinyl, thiazinyl, thiinyl, thiazolidinyl, isothiazolidinyl, oxazolidinyl, isoxazolidinyl,
piperidinyl, pyrazolidinyl imidazolidinyl, thiomorpholinyl, and others.
[045[ As used herein, “substituted amino” means an amino radical which is
substituted by one or two alkyl, cycloalkyl, aryl, aryl or heterocyclyl groups, wherein the
alkyl, aryl, heteroaryl or heterocyclyl are defined as above.
[046[ As used herein, ituted thiol” means RS- group wherein R is an alkyl,
an aryl, heteroaryl or a heterocyclyl group, wherein the alkyl, cycloalkyl, aryl, heteroaryl or
heterocyclyl are defined as above.
[047[ As used herein, “sulfonyl” means an alkylSOz, arylSOz, arylSOz,
carbocyclylSOz, or heterocyclyl-$02 group wherein the alkyl, carbocyclyl, aryl, heteroaryl or
heterocyclyl are defined as above.
WO 75858
[048[ As used herein, "sulfamido" means an N-S(O)2N-, aryl-NS(O)2N-,
heteroaryl-NS(O)2N-, carbocyclyl-NS(O)2N or heterocyclyl-NS(O)2N- group wherein the
alkyl, carbocyclyl, aryl, heteroaryl or heterocyclyl group is as herein bed.
[049[ As used herein, "sulfonamido" means an alkyl-S(O)2N-, aryl-S(O)2N-,
heteroaryl-S(O)2N-, carbocyclyl-S(O)2N- or cyclyl-S(O)2N- group wherein the alkyl,
carbocyclyl, aryl, heteroaryl or heterocyclyl group is as herein described.
[050[ As used herein, "ureido" means an alkyl-NCON-, aryl-NCON-,
heteroaryl-NCON- or heterocyclyl-NCON— group wherein the
, carbocyclyl-NCON— alkyl,
yclyl, aryl, heteroaryl or heterocyclyl group is as herein described.
[051[ As used herein, when two groups are indicated to be “linked” or “bonded”
to form a “ring,” it is to be understood that a bond is formed n the two groups and may
involve replacement of a hydrogen atom on one or both groups with the bond, thereby forming
a carbocyclyl, heterocyclyl, aryl, or aryl ring. The skilled artisan will recognize that such
rings can and are readily formed by routine chemical reactions, and it is within the purview of
the d artisan to both envision such rings and the methods of their formations. Preferred
are rings having from 3-7 members, more preferably 5 or 6 members. As used herein the term
“ring” or “rings” when formed by the combination of two radicals refers to heterocyclic,
carbocyclic, aryl, or heteroaryl rings.
[052[ The d artisan will recognize that some structures described herein
may be resonance forms or tautomers of compounds that may be fairly ented by other
chemical structures, even when kinetically, the artisan recognizes that such structures are only
a very small portion of a sample of such compound(s). Such compounds are clearly
contemplated within the scope ofthis invention, though such resonance forms or tautomers may
not be itly represented herein.
[053[ The compounds provided herein may encompass s stereochemical
forms. The compounds also encompass diastereomers as well as optical isomers, e.g. mixtures
of enantiomers ing racemic mixtures, as well as individual enantiomers and
diastereomers, which arise as a consequence of structural asymmetry in certain compounds.
Separation of the individual isomers or selective synthesis of the individual isomers is
accomplished by application of various methods which are well known to practitioners in the
art. Unless otherwise indicated, when a disclosed compound is named or depicted by a structure
without ying the stereochemistry and has one or more chiral centers, it is understood to
represent all possible stereoisomers of the compound.
[054[ The term “administration” or “administering” refers to a method of giving
a dosage of a compound or pharmaceutical composition to a vertebrate or invertebrate,
including a mammal, a bird, a fish, or an amphibian, where the method is, e. g., orally,
aneously, intravenously, intranasally, topically, transdermally, intraperitoneally,
WO 75858
intramuscularly, intrapulmonarilly, vaginally, ly, ontologically, neuro-otologically,
intraocularly, subconjuctivally, via anterior eye chamber injection, intravitreally,
intraperitoneally, intrathecally, intracystically, intrapleurally, via wound irrigation,
intrabuccally, intra-abdominally, intra-articularly, intra-aurally, intrabronchially,
intracapsularly, intrameningeally, via inhalation, via endotracheal or endobronchial instillation,
via direct instillation into pulmonary cavities, intraspinally, ynovially, intrathoracically,
via thoracostomy irrigation, epidurally, intratympanically, intracisternally, intravascularly,
intraventricularly, intraosseously, via irrigation of ed bone, or via application as part of
any admixture with a prosthetic devices. The preferred method of administration can vary
ing on various factors, 6. g. , the ents of the pharmaceutical composition, the site
of the e, the disease involved, and the severity of the disease.
[055[ A “diagnostic” as used herein is a nd, method, system, or device
that assists in the identification and characterization of a health or disease state. The diagnostic
can be used in standard assays as is known in the art.
[056[ The term “mammal” is used in its usual biological sense. Thus, it
specifically includes humans, cattle, horses, dogs, and cats, but also includes many other
species.
[057[ The term “pharmaceutically acceptable carrier” or “pharmaceutically
acceptable excipient” es any and all solvents, co-solvents, complexing agents, dispersion
media, coatings, antibacterial and antifungal agents, isotonic and absorption delaying agents
and the like which are not biologically or otherwise undesirable. The use of such media and
agents for pharmaceutically active substances is well known in the art. Except insofar as any
conventional media or agent is atible with the active ingredient, its use in the therapeutic
compositions is contemplated. Supplementary active ingredients can also be incorporated into
the compositions. In addition, various adjuvants such as are commonly used in the art may be
included. These and other such compounds are described in the ture, e.g., in the Merck
Index, Merck & Company, Rahway, NJ. Considerations for the inclusion of various
components in pharmaceutical compositions are described, e. g. , in Gilman er al. (Eds) (2010),
Goodman and Gilman’s: The Pharmacological Basis of Therapeutics, 12th Ed. The McGraw-
Hill ies.
[058[ The term aceutically acceptable salt” refers to salts that retain the
biological effectiveness and ties of the compounds of the preferred embodiments and,
which are not biologically or otherwise undesirable. In many cases, the compounds of the
preferred embodiments are e of g acid and/or base salts by virtue of the presence
of amino and/or carboxyl groups or groups similar thereto. Pharmaceutically acceptable acid
addition salts can be formed with inorganic acids and organic acids. Inorganic acids from which
salts can be derived e, for example, hydrochloric acid, hydrobromic acid, sulfuric acid,
WO 75858
nitric acid, oric acid, and the like. Organic acids from which salts can be d include,
for example, acetic acid, propionic acid, glycolic acid, pyruvic acid, oxalic acid, maleic acid,
malonic acid, succinic acid, fiimaric acid, tartaric acid, citric acid, c acid, cinnamic acid,
mandelic acid, methanesulfonic acid, ethanesulfonic acid, p-toluenesulfonic acid, salicylic acid,
and the like. Pharmaceutically acceptable base addition salts can be formed with inorganic and
organic bases. Inorganic bases from which salts can be derived include, for e, sodium,
potassium, lithium, ammonium, calcium, magnesium, iron, zinc, copper, manganese,
aluminum, and the like, particularly red are the ammonium, potassium, sodium, calcium
and magnesium salts. Organic bases from which salts can be derived include, for example,
primary, secondary, and tertiary amines, substituted amines ing naturally occurring
substituted amines, cyclic amines, basic ion exchange resins, and the like, specifically such as
isopropylamine, trimethylamine, diethylamine, triethylamine, pylamine, and
ethanolamine. Many such salts are known in the art, as described in World Patent ation
87/05297, Johnston et al., published September 11, 1987 (incorporated by reference herein).
[059[ “Solvate” refers to the nd formed by the ction of a solvent
and a Wnt pathway tor, a metabolite, or salt thereof. Suitable solvates are
pharmaceutically acceptable solvates including hydrates.
[060[ “Subject” as used herein, means a human or a non-human mammal, e.g. , a
dog, a cat, a mouse, a rat, a cow, a sheep, a pig, a goat, a non-human primate or a bird, e. g., a
chicken, as well as any other vertebrate or invertebrate.
[061[ By “therapeutically effective amount” or “pharmaceutically effective
amount” is one which is sufficient to achieve the desired effect and may vary ing to the
nature and severity ofthe disease condition, and the potency ofthe compound. “Therapeutically
effective amount” is also intended to include one or more of the compounds of Formula (I) in
combination with one or more other agents that are effective to inhibit Wnt d diseases
and/or conditions. The combination of compounds is preferably a synergistic combination.
Synergy, as described, for example, by Chou and Talalay, Advances in Enzyme Regulation
(1984), 22, 27-55, occurs when the effect ofthe compounds when stered in combination
is greater than the additive effect of the compounds when administered alone as a single agent.
In general, a synergistic effect is most clearly demonstrated at sub-optimal concentrations of
the compounds. It will be appreciated that different concentrations may be employed for
prophylaxis than for treatment of an active disease. This amount can fithher depend upon the
t’s height, weight, sex, age and medical history.
[062[ A therapeutic effect relieves, to some extent, one or more ofthe symptoms
of the disease, and es curing a disease. “Curing” means that the symptoms of active
disease are eliminated. However, certain erm or permanent effects of the disease may
exist even after a cure is obtained (such as extensive tissue damage).
[063[ ,” “treatment,” or “treating,” as used herein refers to administering
a pharmaceutical composition for therapeutic purposes. The term “therapeutic ent” refers
to stering treatment to a patient already suffering from a disease thus causing a
therapeutically beneficial effect, such as ameliorating existing symptoms, preventing additional
symptoms, rating or preventing the underlying metabolic causes of symptoms,
postponing or preventing the fithher development of a disorder and/or ng the severity of
symptoms that will or are expected to develop.
[064[ “Morphea” as used herein refers to a skin condition wherein discolored
and/or hardened patches appear on the skin (e.g., one or more outer layers ofthe skin) resulting
from excessive collagen tion.
[065[ “Raynaud’s syndrome” as used herein refers to a disease in which certain
parts ofthe body (e.g., s and/or toes) feel numb and/or cold in response to various stimuli
(e.g., cold temperatures and/or stress) due to arterial narrowing.
[066[ “Darier’s e” as used herein refers to an mal dominant disorder
characterized by the appearance of dark crusty patches on the skin (e.g., keratotic papules,
keratosis follicularis or dyskeratosis ularis) that may contain pus.
[067[ “Wound healing” as used herein refers to a process by which skin and/or
other bodily tissue repairs itself after experiencing, for example, damage and/or .
[068[ “Ichthyosis” as used herein refers to a group of genetic skin ers
characterized by the presence of dry, scaly, cracked, and/or flaky skin.
[069[ “Tendinopathy” as used herein refers to a disease or disorder of a tendon
characterized by inflammation, deterioration, and/or injury of the tendon and/or tissue
contacting, near, or associated with the tendon. Tendinopathy includes, for example,
inflammation of the tendon (e.g., tendonitis), non-inflammatory degeneration of, for example,
the structure and/or composition of a tendon (e.g., tendinosis), inflammation of the paratenon
near or in contact with a tendon (e.g., paratenonitis), micro-trauma to the tendon, and rupture
ofthe tendon (e.g., acute, chronic, partial and/or complete rupture). The term also encompasses
tenosynovitis, a tendinopathy of the outer lining of the tendon which occurs in certain tendons
such as flexor tendons and the es tendon. ms oftendinopathy include pain at rest,
upon palpation of the tendon, and/or with movement of, for example, the tendon, tissue, joint,
or bone near or associated with the tendon, joint stiffi1ess, difficulty , weakness of the
joint or muscles surrounding the tendon, redness of the skin near the tendon, swelling of the
tendon and/or oftissue near the tendon, and/or crepitus.
[070[ "Tendinosis" as used herein, refers to a non-inflammatory injury to the
tendon characterized by intratendinous degeneration of the tendon typically in the form of
microtears in the tissue in and around the tendon caused by overuse, leading to an increase in
the number of tendon repair cells around the area of damage. Degeneration of the tendon is
caused by damage to or disorganization of the collagen fibers, cells, and vascular components
of the tendon, which can reduce the tendon's tensile strength and can lead to tendon rupture if
not treated.
[071[ nitis" as used herein refers to an inflammatory injury to the tendon,
characterized by degeneration like that observed in tendinosis, but also accompanied by
ation of the tendon, vascular disruption and an inflammatory repair response.
Tendinitis is often associated with fibroblastic and myofibroblastic proliferation, as well as
hemorrhage and organizing granulation tissue. Generally, tendinitis is referred to by the body
part involved, such as Achilles tendinitis (affecting the es tendon), or patellar tendinitis
(also known as "jumper's knee," affecting the patellar tendon), though there are certain
exceptions, such as l epicondylitis (also known as s elbow," affecting the Extensor
Carpi Radialis Brevis tendon). Symptoms can vary from aches or pains and local stiffi1ess to a
burning sensation surrounding the entire joint around the inflamed tendon. In some cases,
tendonitis is characterized by ng, sometimes anied by heat and redness, there may
also be visible knots surrounding the joint. For many patients, the pain is usually worse during
and after ty, and the tendon and joint area can become stiffer the following day as muscles
tighten from the movement of the tendon.
[072[ “Psoriasis” as used herein refers to an autoimmune disease in which skin
cells build up and causes raised, red, scaly patches to appear on the skin.
[073[ “Dermatitis” (also known as eczema) as used herein refers to generic
inflammation ofthe skin. Specific types of dermatitis include atopic, contact, nummular, photo-
induced, and stasis dermatitis. These diseases are characterized by itchiness, red skin, and a
rash.
Compounds
[074[ Some ments of the t invention include compounds, salts,
pharmaceutically acceptable salts or pro-drug thereof of Formula (1):
0 /
R4 NH
R2 N/
[075[ In some embodiments of Formula 1, R1, R2 and R4 are independently
selected from the group ting of H, C1_9 alkyl, halide, -N(R10)2, -XR10, CN, -OCF3 and -
[076[ In some embodiments of Formula I, R3 is selected from the group
consisting of carbocyclle6, heterocyclle6, arle6 and heteroarle6.
[077[ In some embodiments of Formula I, when R3 is heteroaryl, the heteroaryl
is not selected from the group consisting of isoquinoline, lH-pyrrolo[2,3-c]pyridine and
tetrazole.
[078[ In some embodiments of Formula I, R5 is selected from the group
consisting of -(C1-9 alkyl)ncarbocyclle7, -(C1-9 alkyl)nheterocyclle7, -(C1_9 alkyl)narle7 and -
(C1.9 alkyl)nheteroarle7.
[079[ In some ments of Formula I, R5 is not 4-pyridle7 when R1, R2 and
R4 are H, R3 is selected from the group consisting of 3-pyridle6, 4-pyridle6, 2-pyridle6,
0 Ni“:
phenle6, thiazoleR6, oleR6, pyrimidineR6, oxazoleR6, ""06;
6 6 306 fig 306 306
"1606 06 ‘
N/ 1606
c' N/ and N/ and R6 and R7 are both H.
, ,
[080[ In some embodiments of Formula I, R5 is not —(CH2)(3-pyridyl)R7 when
R1, R2 and R4 are H, R3 is selected from the group consisting of 3-pyridle6, dle6 and
thiazoleR6, and R6 and R7 are both H.
[081[ In some embodiments of Formula I, R5 is not phenle7 when R1, R2 and
R4 are H, R3 is 4-pyridle6 and R6 and R7 are both H.
[082[ In some embodiments of Formula I, R3 is not dle6 when R1, R2 and
R4 are H, R5 is ed from the group consisting of phenle7,
0;, ,0 M1,0"0 06“:363
,0?) ,0; ,0*""" ,0“ ,00
3 7
Ye\/©\ F and Ye\/©/F and R6 and R7 are both H.
[083[ In some embodiments of Formula I, R3 is not oxazoleR6 when R1, R2 and
J: 1 I
r, / N
R4 are H, R5 is selected from the group consisting of c", IL/(?(0Me and
and R6 is H.
[084[ In some embodiments of Formula I, R3 is not thiazoleR6 when R1, R2 and
R4 are H, R5 is selected from the group consrstrng of. . . Yfilnv and ,DVL
and R6 is H.
[085[ In some embodiments of Formula I, each R6 is 1-5 substituents each
selected from the group consisting of H, C1_9 alkyl, halide, amino, -OCF3, -CF3, -CN, -XR10, -
(C1_9 alkyl)ncarbocyclle8, -(C1_9 alkyl)nheterocyclle8, -(C1_9 alkyl)narle8, -(C1_9
alkyl)nheteroarle8, R“, -N(R10)C(=O)R“, -(C1_9 alkyl)nN(R10)2, -(C1_9
alkyl)nN(R10)SOZR” and -SOzR“.
[086[ In some embodiments of Formula I, each R7 is 1-5 substituents each
selected from the group consisting of H, C1-9 alkyl, halide, amino, -OCF3, -CF3, -CN, -XR10, -
(C1.9 alkyl)ncarbocyclle9, -(C1-9 alkyl)nheterocyclle9, -(C1_9 alkyl)narle9, -(C1_9
alkyl)nheteroarle9, -C(=O)R“, -N(R1°)C(=O)R“, -(C1_9 alkyl)nN(R10)2, -(C1_9
alkyl)nN(R10)SOZR“ and .
[087[ In some embodiments of Formula I, each R8 is 1-5 substituents each
ed from the group consisting of H, C1.3 alkyl, halide, amino, OCF3, -CF3 -CN, -XR12, -
C(=O)R13, -N(R12)C(=O)R13, -(C1_9 nN(R12)2, -(C1_9 alkyl)nN(R12)SOZRl3 and -SOzR13.
[088[ In some embodiments of Formula I, each R9 is 1-5 tuents each
ed from the group consisting of H, C1.3 alkyl, halide, amino, -OCF3, -CF3 -CN, -XR12, -
13, -N(R12)C(=O)R13, -(C1_9 alkyl)nN(R12)2, -(C1_9 alkyl)nN(R12)SOZRl3 and -SOzR13.
[089[ In some ments of Formula I, each R10 is independently selected
from the group consisting of H, C1.9 alkyl, -(C1—9 alkyl)nN(R14)2, -(C1—9 alkyl)ncarbocyclle8, -
(C1_9 alkyl)nheterocyclle8, -(C1-9 alkyl)narle8 and -(C1-9 alkyl)nheteroarle8.
[090[ In some embodiments of Formula I, each R11 is independently selected
from the group ting of C1_9 alkyl, -N(R14)2, -(C1_9 alkyl)ncarbocyclle8, -(C1_9
alkyl)nheterocyclle8, -(C1_9 alkyl)narle8 and -(C1_9 alkyl)nheteroarle8.
[091[ In some embodiments of Formula I, each R12 is independently selected
from the group consisting of H, C1_9 alkyl, -(C1_9 alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclyl, -(C1_
9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9 alkyl)nheteroaryl.
[092[ In some embodiments of Formula I, each R13 is independently selected
from the group consisting of C1_9 alkyl, -N(R14)2, -(C1-9 alkyl)ncarbocyclyl, -(C1—9
alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9 alkyl)nheteroaryl.
[093[ In some embodiments of a I, each R14 is independently selected
from the group consisting of H, C1.3 alkyl, carbocyclyl and aryl.
[094[ In some embodiments of Formula I, each X is ed from the group
consisting of a bond, and -S-.
[095[ In some embodiments of Formula I, each n is 0 or 1.
[096[ In some embodiments of Formula I, X is O.
[097[ In some embodiments of Formula I, R1, R2 and R4 are H.
[098[ Some embodiments of the present invention include compounds, salts,
pharmaceutically acceptable salts or pro-drug thereof of Formula (Ia):
0 /
wherein:
R3 is ed from the group consisting of 3-pyridle6, 5-pyrimidinle6, and 4-
pyridazinleG,
R5 is selected from the group consisting of oarle7,
R6 is a substituent selected from the group ting of -(C1-2 heterocyclle8 and
-heterocyclle8,
R7 is 1-2 substituents each independently selected from the group consisting of H, C1.3
alkyl, halide, -NH2, -OCF3, -CF3, -CN, -OR10, -(C1-2 alkyl)heterocyclle9, -heterocyclle9, and
802R”,
R8 is 1-2 substituents each independently selected from the group ting of H, C1_3
alkyl, halide, and -OR12,
each R9 is 1-2 substituents each independently selected from the group consisting ofH,
C1_3 alkyl, halide, amino, -OCF3, -CF3, —CN, and -OR12,
R10 is selected from the group consisting ofH and C1_3 alkyl,
R11 is C1—3 alkyl, and
each R12 is independently selected from the group consisting ofH and C1.3 alkyl.
[099[ Some embodiments of the present invention include compounds, salts,
pharmaceutically acceptable salts or pro-drug thereof of a (Ia):
0 /
wherein:
R3 is 3-pyridle6,
R5 is selected from the group consisting of pyridle7, -pyrimidinle7, and -
pyridazinle7,
R6 is —CH2heterocyclle8,
R7 is 1-2 substituents each independently selected from the group consisting of H, F,
OH $.43 ,1;
OOOéUNN E I
N N N N N J
methyl, -NH2, -CF3, -CN, -OMe, -SOzMe, wlw Wlw ml” ml” “I” ‘17?"
, , , , , ,
and «VLF ,and
R8 is 1-2 substituents each ndently selected from the group ting of H and
halide.
[0100[ In some ments of Formula Ia, R3 is selected from the group
consisting of 3-pyridle6, 5-pyrimidinle6, and 4-pyridazinle6,
[0101[ In some ments of a Ia, R5 is selected from the group
consisting of -heteroarle7.
[0102[ In some embodiments of Formula Ia, R5 is selected from the group
consisting of -piperazinle7, -tetrahydropyranle7, —piperidinle7, pyrazolle7, pyrimidinle7,
pyridazinle7, benzo[d][l,3]dioxolle7, 2,3-dihydrobenzo[b][l,4]dioxinle7, pyrazinle7,
and 3-pyridle7.
[0103[ In some embodiments of Formula Ia, R6 is a substituent selected from the
group consisting of -(C1-2 alkyl)heterocyclle8 and -heterocyclle8.
[0104[ In some embodiments ofFormula Ia, R6 is each R6 is 1-2 substituents each
selected from the group consisting of -(C1-2 alkyl)heterocyclle8, -heterocyclle8, -(C1_2
alkyl)arle8, )C(=O)R11 and -(C1.2 alkyl)N(R10)2.
[0105[ In some ments of Formula Ia, R7 is 1-2 substituents each
independently selected from the group consisting of H, C1_3 alkyl, halide, -NH2, -OCF3, -CF3, -
CN, -OR10, -(C1-2 alkyl)heterocyclle9, -heterocyclle9, and -SOzR”.
[0106[ In some embodiments of Formula Ia, each R7 is 1-2 substituents each
selected from the group ting ofunsubstituted C1-3 alkyl, halide, amino, -OCF3, -CF3, -CN,
-OR10, -C(=O)R“, -N(R10)C(=O)R”, -N(R10)2, -(C1_2 alkyl)N(R10)2, and )SOZR”.
[0107[ In some embodiments of Formula Ia, R8 is 1-2 substituents each
independently selected from the group consisting of H, C1.3 alkyl, halide, and -OR12.
[0108[ In some embodiments of Formula Ia, each R9 is 1-2 substituents each
independently selected from the group consisting of H, C1_3 alkyl, halide, amino, -OCF3, -CF3,
—CN, and -OR12.
[0109[ In some embodiments of Formula Ia, R10 is selected from the group
consisting ofH and C1_3 alkyl.
[0110[ In some ments of Formula Ia, each R10 is independently selected
from the group consisting of H, C1_3 alkyl, -(C1_3 alkyl)N(R14)2 and -arle8.
[0111[ In some embodiments of Formula Ia, R11 is C1.3 alkyl.
[0112[ In some embodiments of Formula Ia, R11 is each R11 is independently
selected from the group consisting of C1.3 alkyl, -N(R14)2, -carbocyclle8 and -heterocyclle8.
[0113[ In some embodiments of Formula Ia, each R12 is independently selected
from the group ting ofH and C1.3 alkyl.
[0114[ In some embodiments of Formula Ia, R3 is ed from the group
consisting of arle6 and heteroarle6.
[0115[ In some embodiments of Formula Ia, when R3 is heteroaryl, the heteroaryl
is not selected from the group consisting of isoquinoline, lH-pyrrolo[2,3-c]pyridine and
tetrazole.
[0116[ In some embodiments of Formula Ia, R5 is selected from the group
consisting of -carbocyclle7, -heterocyclle7, -arle7, -heteroarle7, and -(C1-2
alkyl)heteroarle7.
[0117[ In some embodiments of Formula Ia, R5 is not 4-pyridle7 when R3 is
selected from the group ting of 3-pyridle6, 4-pyridle6, 2-pyridle6, phenle6,
o N
HzNfij/fiz; NH2
HO \ “‘9
thiazoleR6,imidazoleR6, FYrimidineR6,oxazoleR6, N/ N /6/52, /N
, ,
F <1 °
0 "W /.
my N? M \ M "\ .v~~~WN/
1“" N/ N/ N/
3 3 3 3 3 3
(1 ° \ ‘15 \
N \ 19
I/ H I/
CI N and N and R6 and R7 are both H.
3 ,
[0118[ In some embodiments of Formula Ia, R5 is not —(CH2)(3-pyridyl)R7 when
R3 is selected from the group consisting of 3-pyridle6, 4-pyridle6 and thiazoleRG, and R6 and
R7 are both H.
[0119[ In some embodiments of Formula Ia, R5 is not phenle7 when R3 is 4-
pyridle6 and R6 and R7 are both H.
[0120[ In some embodiments of Formula Ia, R3 is not 3-pyridle6 when R5 is
QVNN\ / 30%?
selected from the “a fl
group consisting of phenle7, 3
0 F
QF NHNH2 0%
Lil. 0V(\0
clj‘i ark/G ,LLL Nd);\/©\Fand
;\/©/F and R6 and R7 are both H.
[0121[ In some embodiments of Formula Ia, R3 is not eR6 when R5 is
£1 /N
selected from the group consisting of c" £0.“ nd and R6
, ,
is H.
[0122[ In some embodiments of Formula Ia, R3 is not thiazoleR6 when R5 is
ed from the group cons1st1ng of and and R is H.
[0123[ In some embodiments of Formula Ia, each R6 is 1-2 substituents each
selected from the group consisting of H, C1.3 alkyl, halide, amino, -OCF3, -CF3, -CN, -OR10, -
(C14 heterocyclle8, -heterocyclle8, -(C1_2 arle8, -C(=O)R”, -N(R10)C(=O)R11
and -(C1_2 alkyl)N(R10)2.
[0124[ In some embodiments of Formula Ia, each R7 is 1-2 substituents each
selected from the group consisting of H, C1.3 alkyl, halide, amino, -OCF3, -CF3, -CN, -OR10, -
(C14 alkyl)heterocyclle9, -heterocyclle9, , -(C1_2 alkyl)arle9, -C(=O)R”, -
N(R10)C(=O)R”, )2, -(C1_2 alkyl)N(R10)2, -N(R10)SOZR” and -SOzR“.
[0125[ In some embodiments of Formula Ia, each R8 is 1-2 substituents each
selected from the group consisting of H, C1_3 alkyl, halide, amino, OCF3, -CF3 —CN and -OR12.
[0126[ In some embodiments of Formula Ia, each R9 is 1-2 substituents each
selected from the group consisting of H, C1-3 alkyl, halide, amino, -OCF3, -CF3 —CN and -OR12.
[0127[ In some embodiments of Formula Ia, each R10 is independently selected
from the group consisting of H, C1_3 alkyl, -(C1_3 alkyl)N(R14)2 and -arle8.
[0128[ In some embodiments of Formula Ia, each R11 is independently selected
from the group consisting of C1.3 alkyl, -N(R14)2, -carbocyclle8 and -heterocyclle8.
[0129[ In some embodiments of Formula Ia, each R12 is independently ed
from the group consisting ofH and C1.3 alkyl.
[0130[ In some embodiments of Formula Ia, each R14 is independently selected
from the group consisting of H, C1_3 alkyl and carbocyclyl.
[0131[ In some embodiments of Formula I or Formula Ia, halide is e.
[0132[ In some embodiments of Formula I or Formula Ia, R3 is —arle6.
[0133[ In some embodiments of Formula I or Formula Ia, R3 is —heteroarle6.
[0134[ In some ments of Formula I or Formula Ia, R5 is —arle7.
[0135[ In some embodiments of Formula I or Formula Ia, R5 is —heteroarle7.
[0136[ In some embodiments of a I or Formula Ia, R5 is —heterocyclle7.
[0137 [ In some embodiments of Formula I or Formula Ia, R3 is —heteroarle6 and
R5 is oarle7.
[0138[ In some embodiments of Formula I or Formula Ia, R3 is —phenle6 and R5
is —heteroarle7.
[0139[ In some embodiments of Formula I or Formula Ia, R3 is —heteroarle6 and
R5 is —phenle7.
[0140[ In some embodiments of Formula I or Formula Ia, R3 is —3-pyridle6 and
R5 is —3-pyridle7.
[0141[ In some embodiments of Formula I or a Ia, R3 is —3-pyridle6 and
R5 is —CH2pyridle7.
[0142[ In some embodiments of Formula I or Formula Ia, R3 is —3-pyridle6 and
R5 is —pyridazinle7.
[0143[ In some embodiments of a I or Formula Ia, R3 is —3-pyridle6 and
R5 is —pyrazinle7.
[0144[ In some embodiments of Formula I or a Ia, R3 is —3-pyridle6 and
R5 is — pyrimidinle7.
[0145[ In some embodiments of Formula I or Formula Ia, R3 is —3-pyridle6 and
R5 is benzo[d][l,3]dioxolyl.
[0146[ In some ments of Formula I or Formula Ia, R3 is idle6 and
R5 is 2,3-dihydrobenzo[b][l,4]dioxinyl.
[0147[ In some embodiments of Formula I or Formula la, the aryl is phenyl.
[0148[ In some embodiments of Formula I or Formula Ia, when R3 is heteroaryl,
the heteroaryl is dyl.
[0149[ In some ments of Formula I or Formula Ia, when R5 is heteroaryl,
the heteroaryl is 3-pyridyl.
[0150[ In some embodiments of Formula I or Formula Ia, when R5 is aryl,
the heteroaryl is 5-pyrimidinyl.
[0151[ In some embodiments of Formula I or a Ia, when R5 is heteroaryl,
the heteroaryl is dazinyl.
[0152[ In some embodiments of Formula I or Formula Ia, when R5 is heteroaryl,
the heteroaryl is pyrazolyl.
[0153[ In some embodiments of Formula I or Formula Ia, when R5 is heteroaryl,
the heteroaryl is benzo[d][l,3]dioxolyl.
[0154[ In some embodiments of Formula I or Formula Ia, when R5 is heteroaryl,
the heteroaryl is 2,3-dihydrobenzo[b] [ l ,4]dioxinyl.
[0155[ In some embodiments of Formula I or Formula Ia, R6 is a heterocyclyl.
For example, the heterocyclyl can be selected from the group consisting of morpholinyl,
piperazinyl, piperidinyl, tetrahydropyranyl, azetidinyl and pyrrolidinyl. In certain
embodiments, R6 is morpholinyl. In another embodiment, R6 is piperazinyl. In another
embodiment, R6 is piperidinyl. In another ment, R6 is pyrrolidinyl.
[0156[ In some embodiments of Formula I or Formula Ia, R7 is a heterocyclyl.
For example, the heterocyclyl can be selected from the group consisting of morpholinyl,
piperazinyl, piperidinyl, tetrahydropyranyl, azetidinyl and pyrrolidinyl. In certain
embodiments, R7 is morpholinyl. In another embodiment, R7 is piperazinyl. In another
embodiment, R7 is dinyl. In another embodiment, R7 is pyrrolidinyl. In another
embodiment, R7 is azetidinyl.
[0157[ In some embodiments of Formula I or Formula Ia, R10 is a carbocyclyl.
For example, the carbocyclyl can be ed from the group consisting of cyclopropyl,
cyclobutyl, cyclopentyl and cyclohexyl. In n embodiments, R10 is cyclopropyl. In another
embodiment, R10 is cyclobutyl. In another ment, R10 is cyclopentyl. In another
embodiment, R10 is cyclohexyl.
[0158[ In some embodiments of Formula I or a Ia, R11 is a heterocyclyl.
For example, the heterocyclyl can be selected from the group consisting of morpholinyl,
piperazinyl, piperidinyl, tetrahydropyranyl, azetidinyl and pyrrolidinyl. In certain
embodiments, R11 is morpholinyl. In another embodiment, R11 is piperazinyl. In another
embodiment, R11 is piperidinyl. In another embodiment, R11 is pyrrolidinyl. In another
embodiment, R11 is azetidinyl.
[0159[ In some embodiments of Formula I or Formula Ia, R11 is a carbocyclyl.
For example, the yclyl can be ed from the group consisting of ropyl,
cyclobutyl, cyclopentyl and cyclohexyl. In certain embodiments, R11 is cyclopropyl. In another
embodiment, R11 is cyclobutyl. In another embodiment, R11 is cyclopentyl. In another
embodiment, R11 is cyclohexyl.
[0160[ In some embodiments of Formula I or Formula Ia, R12 is a carbocyclyl.
For example, the carbocyclyl can be selected from the group consisting of cyclopropyl,
cyclobutyl, cyclopentyl and cyclohexyl. In certain embodiments, R12 is cyclopropyl. In another
embodiment, R12 is cyclobutyl. In another embodiment, R12 is cyclopentyl. In r
embodiment, R12 is cyclohexyl.
[0161[ In some ments of Formula I or a Ia, R13 is a heterocyclyl.
For e, the heterocyclyl can be selected from the group consisting of morpholinyl,
piperazinyl, piperidinyl, tetrahydropyranyl, azetidinyl and pyrrolidinyl. In certain
embodiments, R13 is morpholinyl. In another ment, R13 is piperazinyl. In another
ment, R13 is piperidinyl. In another ment, R13 is idinyl. In another
embodiment, R13 is azetidinyl.
[0162[ In some embodiments of Formula I or Formula Ia, R13 is a carbocyclyl.
For example, the carbocyclyl can be selected from the group consisting of cyclopropyl,
cyclobutyl, cyclopentyl and cyclohexyl. In certain embodiments, R13 is cyclopropyl. In another
embodiment, R13 is cyclobutyl. In another embodiment, R13 is cyclopentyl. In another
embodiment, R13 is cyclohexyl.
[0163[ In some embodiments of Formula I or Formula Ia, R6 is one substituent.
[0164[ In some embodiments of Formula I or Formula Ia, R6 is 1-2 substituents.
[0165[ In some embodiments of Formula I, R6 is 1-3 substituents.
[0166[ In some embodiments of Formula I, R6 is 1-4 substituents.
[0167[ In some embodiments of a I or Formula Ia, R6 is H.
[0168[ In some embodiments of a I or Formula Ia, R6 is one substituent
and the substituent is a halide.
[0169[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is —NH2.
[0170[ In some embodiments of a I or Formula Ia, R6 is one substituent
and the substituent is -OCF3.
[0171[ In some embodiments of Formula I or Formula Ia, R6 is one tuent
and the substituent is -OCH3.
[0172[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is -CF3.
[0173[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the tuent is —heterocyclle8.
[0174[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is heterocyclle8.
[0175[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is —(CH2)pyrrolidinle8.
[0176[ In some embodiments of a I or Formula Ia, R6 is one substituent
and the substituent is —(CH2)pyrrolidinle8 where R8 is two tuents and both substituents
are halides.
[0177[ In some embodiments of Formula I or Formula Ia, R6 is one tuent
and the substituent is —(CH2)piperidinle8.
[0178[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is —(CH2)phenle8.
[0179[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is — phenoxyRS.
[0180[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is :lW.
[0181[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is -N(R10)2.
[0182[ In some embodiments of Formula I or Formula Ia, R6 is one tuent
and the substituent is -N(R10)2 where each R10 is independently selected from C1_3 alkyl.
[0183[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is —(CH2)N(R10)2.
[0184[ In some embodiments of a I or Formula Ia, R6 is one substituent
and the tuent is —(CH2)N(R10)2 where each R10 is ndently selected from C1-3 alkyl.
[0185[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is -N(R10)SOzR”.
[0186[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is -N(R10)C(=O)R”.
[0187[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is -N(R10)C(=O)R11 where R11 is a heterocyclyl.
[0188[ In some embodiments of Formula I or Formula Ia, R6 is one substituent
and the substituent is -N(R10)C(=O)R11 where R11 is a carbocyclyl.
[0189[ In some embodiments of Formula I, R6 is two substituents and the
substituents are fluorine and -(C1-9 nheterocyclle8.
[0190[ In some embodiments of Formula Ia, R6 is two substituents and the
substituents are fluorine and -heterocyclle8.
[0191[ In some embodiments of Formula Ia, R6 is two tuents and the
substituents are fluorine and -(C1-2 alkyl)heterocyclle8.
[0192[ In some embodiments of a I or Formula Ia, R6 is one tuent
and the substituent is select from the group consisting of
[0193[ In some ments of Formula I or Formula Ia, R7 is one substituent.
[0194[ In some embodiments of Formula I or Formula Ia, R7 is 1-2 substituents.
[0195[ In some embodiments of Formula I, R7 is 1-3 substituents.
[0196[ In some ments of Formula I, R7 is 1-4 substituents.
[0197[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is a halide.
[0198[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is —NH2.
[0199[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is —OH.
[0200[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -CF3.
[0201[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -CN.
[0202[ In some embodiments of Formula I, R7 is one substituent and the
substituent is -XR10 where X is O and R10 is C1_3 alkyl.
[0203[ In some embodiments of Formula Ia, R7 is one substituent and the
substituent is -OR10 and R10 is C1_3 alkyl.
[0204[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is —phenle9.
[0205[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the tuent is —(CH2)N(R10)2.
[0206[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is —(CH2)N(R10)2 where each R10 is independently selected from C1-3 alkyl.
[0207[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the tuent is —(CH2)heterocyclle9.
[0208[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is —(CH2)pyrrolidinle9.
[0209[ In some embodiments of a I or Formula Ia, R7 is one substituent
and the substituent is —heterocyclle9.
[0210[ In some embodiments of Formula I or a Ia, R7 is one substituent
and the substituent is — ng.
[0211[ In some embodiments of Formula I or a Ia, R7 is one substituent
and the substituent is —(CH2)phenle9.
[0212[ In some embodiments of a I or Formula Ia, R7 is one substituent
and the substituent is —phenle9.
[0213[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -N(R10)C(=O)R”.
[0214[ In some ments of Formula I or a Ia, R7 is one substituent
and the substituent is -N(R10)C(=O)R11 where R11 is a carbocyclyl.
[0215[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -N(R10)2.
[0216[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -C(=O)R11 where R11 is select from the group consisting of —
cyclle8 and -N(R10)2.
[0217[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -SOzR”.
[0218[ In some ments of Formula I or Formula Ia, R7 is one substituent
and the substituent is -SOzR”; and R11 is C1_3 alkyl.
[0219[ In some ments of Formula I or Formula Ia, R7 is two substituents
and the substituents are C1.3 alkyl and —heterocyclle9.
[0220[ In some embodiments of Formula I or Formula Ia, R7 is one substituent
and the substituent is select from the group consisting of
[0221[ In some embodiments of Formula I or Formula Ia, R8 is one substituent.
[0222[ In some embodiments of Formula I or Formula Ia, R8 is 1-2 substituents.
[0223[ In some embodiments of Formula I, R8 is 1-3 substituents.
[0224[ In some embodiments of a I, R8 is 1-4 substituents.
[0225[ In some embodiments of Formula I or Formula Ia, R8 is H.
[0226[ In some embodiments of Formula I or Formula Ia, R8 is one substituent
and the substituent is C1_3 alkyl.
[0227[ In some embodiments of Formula I or Formula Ia, R8 is one tuent
and the substituent is —OH.
[0228[ In some embodiments of Formula I or a Ia, R8 is one substituent
and the tuent is a halide.
[0229[ In some embodiments of Formula I or Formula Ia, R8 is two substituents
and the substituents are halides.
[0230[ In some embodiments of Formula I, R8 is three substituents and the
substituents are halides.
[0231[ In some embodiments of Formula I or Formula Ia, R9 is one tuent.
[0232[ In some embodiments of Formula I or Formula Ia, R9 is 1-2 substituents.
[0233[ In some embodiments of a I, R9 is 1-3 substituents.
[0234[ In some embodiments of Formula I, R9 is 1-4 substituents.
[0235[ In some embodiments of Formula I or Formula Ia, R9 is H.
[0236[ In some ments of Formula I or Formula Ia, R9 is one substituent
and the substituent is C1.3 alkyl.
[0237[ In some embodiments of Formula I or Formula Ia, R9 is one substituent
and the substituent is —OH.
[0238[ In some embodiments of Formula I or Formula Ia, R9 is one substituent
and the substituent is a halide.
[0239[ In some embodiments of Formula I or Formula Ia, R9 is two substituents
and the tuents are halides.
[0240[ In some embodiments of Formula I or a Ia, R8 is a -C1.3 alkyl. For
example, the -C1_3 alkyl can be selected from the group consisting of methyl, ethyl, n-propyl
and isopropyl. In certain embodiments, R8 is methyl. In another embodiment, R8 is ethyl.
[0241[ In some embodiments of Formula I or a Ia, R10 is a -C1_3 alkyl. For
e, the -C1_3 alkyl can be selected from the group consisting of methyl, ethyl, n-propyl
and iso-propyl. In certain embodiments, R10 is methyl. In another embodiment, R10 is ethyl. In
another embodiment, R10 is n-propyl. In another embodiment, R10 is iso-propyl.
[0242[ In some embodiments of Formula I or Formula Ia, R11 is a -C1.3 alkyl. For
example, the -C1.3 alkyl can be selected from the group consisting of methyl, ethyl, n-propyl
and iso-propyl. In certain embodiments, R11 is methyl. In another embodiment, R11 is ethyl. In
another embodiment, R11 is n-propyl. In r embodiment, R11 is iso-propyl.
[0243[ In some embodiments of Formula I or Formula Ia, R14 is a -C1.3 alkyl. For
example, the -C1.3 alkyl can be selected from the group consisting of methyl, ethyl, n-propyl
and iso-propyl. In certain embodiments, R14 is methyl. In another embodiment, R14 is ethyl. In
r embodiment, R14 is n-propyl. In another embodiment, R14 is iso-propyl.
[0244[ In some embodiments of Formula I or Formula Ia, R3 is —3-pyridle6 and
R5 is —3-pyridle7, R6 is one tuent consisting of -(C1-2 alkyl)N(R10)2, and R7 is one
substituent consisting of -CF3, and each R10 is -C1_3 alkyl.
[0245[ In some embodiments of Formula I or Formula Ia, R3 is —3-pyridle6 and
R5 is —3 -pyridle7, R6 is one substituent ting of -(C1_2 alkyl)heterocyclle8, R7 and R8 are
both H, and the cycle is a 5-member ring.
[0246[ In some embodiments of Formula I or Formula Ia, R3 is idle6 and
R5 is —3 -pyridle7, R6 is one substituent consisting of -(C1-2 heterocyclle8, R7 and R8 are
both H, and the heterocycle is a 6-member ring.
[0247[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one tuent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of CN; R8 is H; and the heterocycle is a 5-member ring.
[0248[ In some embodiments of Formula I or Formula Ia; R3 is idle6 and
R5 is —3-py1idle7; R6 is one tuent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of CN; R8 is H; and the cycle is a 6-member ring.
[0249[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1-2 heterocyclle8; R7 is one
substituent consisting of CF3; R8 is H; and the heterocycle is a 6-member ring.
[0250[ In some embodiments of Formula I or Formula Ia; R3 is idle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent ting of -heterocyclle8; each R8 is H; and the heterocycles are independently
selected from a 5 or 6-member ring.
[0251[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-pyridle7; R6 is one substituent consisting of -(C1_2 alkyl)N(R10)2; and R7 is one
substituent consisting of -CN; and each R10 is -C1_3 alkyl.
[0252[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-pyridle7; R6 is one substituent consisting of -(C1-2 alkyl)N(R10)2; and R7 is one
tuent consisting of -(C1-2 alkyl)heterocyclle8; R8 is H; each R10 is -C1_3 alkyl; and the
heterocycle is a 6-member ring.
[0253[ In some ments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of ocyclle8; each R8 is one substituent independently selected
from H and -OH; and the heterocycles are ndently selected from a 5 or 6-member ring.
[0254[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of -C(=O)R”; R11 is -heterocyclle8; each R8 is H; and the heterocycles
are independently selected from a 5 or 6-member ring.
[0255[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of -heterocyclle8; each R8 is 1-3 substituents independently selected
from H and F with the proviso that at least one substituent on one heterocycle is fluorine; and
each heterocycle is a 5-member ring.
[0256[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one tuent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of -C(=O)R”; R11 is ; R10 is heterocyclle8; each R8 is H; and the
heterocycles are independently selected from a 5 or 6-member ring.
[0257[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1-2 alkyl)heterocyclle8; R7 is one
substituent consisting of 802R”; R8 is H; R11 is -C1.3 alkyl; and the heterocycle is a 6-member
ring.
[0258[ In some embodiments of Formula I or Formula Ia; R3 is —3-pyridle6 and
R5 is —3-py1idle7; R6 is one substituent consisting of -(C1_2 alkyl)heterocyclle8; R7 is H; R8
is 1-4 substituents independently selected from H and F with the proviso that at least one
substituent is fluorine; and the cycle is a er ring.
[0259[ Illustrative compounds of Formula (I) are shown in Table 1.
Table 1.
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Com ound re aration
[0260[ The starting als used in ing the compounds of the invention
are known, made by known methods, or are commercially available. It will be apparent to the
skilled artisan that methods for preparing precursors and fimctionality related to the compounds
claimed herein are lly described in the literature. The skilled artisan given the literature
and this disclosure is well equipped to prepare any ofthe compounds.
[0261[ It is recognized that the skilled artisan in the art of organic try can
readily carry out lations without fithher direction, that is, it is well within the scope and
practice of the skilled artisan to carry out these manipulations. These include reduction of
carbonyl nds to their ponding alcohols, oxidations, acylations, aromatic
substitutions, both electrophilic and nucleophilic, etherifications, esterification and
saponification and the like. These manipulations are discussed in standard texts such as March 's
Advanced c Chemistry: Reactions, Mechanisms, and Structure 6111 Ed., John Wiley &
Sons (2007), Carey and Sundberg, Advanced Organic Chemistry 5111 Ed., er (2007),
Comprehensive Organic Transformations: A Guide to Functional Group Transformations, 211d
Ed., John Wiley & Sons (1999) (incorporated herein by reference in its entirety) and the like.
[0262[ The skilled artisan will readily appreciate that certain reactions are best
carried out when other fimctionality is masked or protected in the molecule, thus avoiding any
undesirable side reactions and/or increasing the yield of the on. Often the skilled artisan
es protecting groups to accomplish such increased yields or to avoid the undesired
reactions. These reactions are found in the literature and are also well within the scope of the
skilled artisan. Examples ofmany ofthese manipulations can be found for example in T. Greene
and P. Wuts Protecting Groups in Organic Synthesis, 4th Ed., John Wiley & Sons ,
incorporated herein by reference in its ty.
[0263[ To finther illustrate this invention, the following examples are included.
The examples should not, of course, be construed as specifically limiting the invention.
Variations of these examples within the scope of the claims are within the purview of one
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skilled in the art and are considered to fall within the scope of the invention as described, and
claimed herein. The reader will ize that the skilled artisan, armed with the present
disclosure, and skill in the art is able to prepare and use the ion without exhaustive
examples.
[0264[ Trademarks used herein are examples only and reflect illustrative materials
used at the time of the invention. The d artisan will recognize that variations in lot,
manufacturing processes, and the like, are expected. Hence the examples, and the trademarks
used in them are non-limiting, and they are not intended to be limiting, but are merely an
illustration of how a skilled artisan may choose to perform one or more of the embodiments of
the invention.
[0265[ (H) nuclear magnetic resonance spectra (NMR) were measured in the
indicated ts on a Bruker NMR spectrometer (Avance TM , 300 MHz for 1H or
Avance TM DRXSOO, 500 MHz for 1H) or Varian NMR spectrometer (Mercury 400BB, 400
MHz for 1H). Peak positions are expressed in parts per million (ppm) downfield from
tetramethylsilane. The peak multiplicities are denoted as follows, s, singlet, d, doublet, t, triplet,
q, quartet, ABq, AB quartet, quin, quintet, sex, sextet, sep, septet, non, nonet, dd, doublet of
doublets, d/ABq, doublet of AB quartet, dt, doublet of triplets, td, t of doublets, m,
multiplet.
[0266[ The following abbreviations have the indicated meanings:
brine = saturated aqueous sodium chloride
CDC13 = deuterated chloroform
DCE = dichloroethane
DCM = dichloromethane
DHP = dihydropyran
DIPEA = diisopropylethylamine
DMF = methylformamide
DMSO'd6 = deuterated dimethylsulfoxide
ESIMS = electron spray mass spectrometry
EtOAc = ethyl acetate
EtOH = ethanol
h = hour
HATU = 2-( l Hazabenzotriazol- l -yl)- l
, 1,3 ,3 -tetramethyluronium
orophosphate
HCl = hydrochloric acid
HOAc = acetic acid
H2804 = sulfiJric acid
iPrOH = iso-propyl alcohol
KOAc = potassium acetate
K3PO4 = ium phosphate
LAH = m aluminum hydride
mCPBA = meta-Chloroperoxybenzoic acid
VleOH = methanol
VlgSO4 = magnesium sulfate
min. = minute
VIW = microwave
\IaBH(OAc)3 = sodium triacetoxyborohydride
\IaHC03 = sodium bicarbonate
\IaH803 = sodium bisulfite
\IaHSO4 = sodium bisulfate
\IaOH = sodium hydroxide
\IH4OH = ammonium hydroxide
\IMR = nuclear magnetic resonance
Pd/C = palladium(0) on carbon
PdClz(dppf)2 = l,l'-bis(diphenylphosphino)ferrocene]palladium(II) chloride
Pd2(dba)3 = tris(dibenzylideneacetone)dipalladium(0)
Pd(PPh3)4 = tetrakis(triphenylphosphine)palladium(0)
PPTS = nium p-toluenesulfonate
r.t. = room temperature
satd. = saturated
sol“. = solution
Reflx. = heated to reflux
TEA = triethylamine
TFA = trifluoroacetic acid
THF = ydrofiJran
TLC = thin layer chromatography
Tr-Cl = trityl chloride or triphenylmethyl chloride
[0267[ The following example schemes are provided for the guidance of the
reader, and tively represent an example method for making the compounds provided
herein. Furthermore, other methods for ing compounds of the invention will be y
apparent to the person of ordinary skill in the art in light of the following reaction schemes and
examples. The skilled artisan is ghly equipped to prepare these compounds by those
methods given the literature and this disclosure. The compound numberings used in the
synthetic schemes depicted below are meant for those specific schemes only, and should not be
construed as or confused with same numberings in other sections of the application. Unless
otherwise indicated, all variables are as defined above.
General procedures
[0268[ Compounds of Formula I of the present ion can be prepared as
depicted in Scheme 1.
"W"" 0 /
co H2 <\’/N HNJ N R‘ N
\0/ i(P \o/
I i I
\N Me)*HC1, \N Fac 0’ 0 CF: \N
12, DCM, m.
R2 N/ imidazole, DMF, 65°C N/ R2 R2 N/
H H H
R1 R1 R1
II I" IV
DHP,PPTS
DCM, reflux
o /
Q R‘ R4
we "\
B o
\N LAH \N
KOAcsPdClz(dPPf)2 / THF 0°C /
R2 R‘ N ’
R2 N
DMF, 90°C, 2h
R1 R1 R1
0 o 0
VII VI V
R3—Br
K3P04
Pd(PPh3)4
H20, 90°C, 3 11
O /
R4 R‘ R‘
cHo CO2” NH
R _NH25
R3 R3 R3
\N AgNOs, NaOH, 112 \N HATU, DIPEA \
/ Dioxane, rt, overnight / DMF, rt, overnight /N
R2 N R2 N R2 N
R1 R1 R1
0 o 0
VIII IX x
TFA, DCM,
Et3§iH,rt,3h
o /R
R4 NH
R2 N/
Scheme 1
[0269[ Scheme 1 describes a method for preparation of indazolecarboxamide
derivatives (1) by first g the Weinreb amide (III) of a 1H-indazole-3 -carboxylic acid (11).
The Weinreb amide (III) is reacted with (bis(trifluoroacetoxy)iodo)benzene to produce the 5-
iodo-lH-indazolecarboxylic acid (IV) followed by THP tion ofthe indazole nitrogen.
The Weinreb amide of protected indazole V is reduced to de VI followed by reaction
with bis(pinacolato)diboron to give the pinacol ester (VII). Suzuki coupling with a variety of
aromatic and nonaromatic bromides yields the R3 tuted indazole VIII. Oxidation of the
aldehyde to the acid (IX) followed by HATU mediated coupling of a variety of amines and
sequent deprotection produces the desired indazolecarboxamide derivatives (1).
[0270[ Compounds of Formula I of the present invention can also be prepared as
depicted in Scheme 2.
R4 R4 R4
“I" “I“ COzR
Br Br
\ HOAc, Brz \ ROH, 1.12504 \
N," 90°C, 16 h
R2 R2 N,"W
R2 N/N
H H R = Me, Et H
R1 R1 R1
" x' XII
DHP, PPTS
DCM, reflux
R4 NIH R4 R4
cozH cozR
Br Br Br
\N “S‘Nflz \N .w \N
90°C, 1 h
R2 N’ HATU, DIPEA
R2 N/ R2 N,
DMF, rt, overnight
R1 R1 R1
0 0 O
XV XIV XIII
Route' 2
Route: 1
0 0
R3— \B—B’
B(0H)2
1, id bi , KOAc, Pdc11(dpp01,DMF, 90°C, 2 h
KOAc, PdClz(dppf)2
DMF, 90°C, 2 h 2- R3-Br 3 1‘
, K3P04, Pd(PPh3)4,H20: 90°C,
R5 R5
R4 NH R4 N”
R3 R3
\N TFA, DCM, \N
, Et3SiH, rt, 3 h
R2 R2 N/
Scheme 2
[0271[ Scheme 2 describes an ative method for preparation of indazole
carboxamide derivatives (1) by bromination of the indazole 5-position followed by
esterification to form ester XII. The indazole nitrogen is THP protected and the ester is
hydrolyzed to acid XIV. The acid is coupled with a variety of amines to produce amide XV
which is then coupled with a variety of boronic acids (Route 1) to give X. Alternatively, XV
can be converted to the boronate ester and then couple to a variety of bromides (Route 2) to
yield X. Final deprotection of the indazole nitrogen yields the desired indazolecarboxamide
derivatives (1).
[0272[ nds of Formula I of the t invention can also be prepared as
depicted in Scheme 3.
R4 R4 R4
cozH cozH 002R
Br Br
\N HOAc, Br2 ROH, st04 \N
90°C 16h reflux 4h ’
R2 bf 2fig"If ’
R R2 N
H H H
R1 R1 R = Me, Et R1
II XI XII
Route: 1
Tr-CI, DMF Tr-Clo DCM
Route. 2.
TEA, l1: DIPEA, rt
NH R4 R4 COzH cozR
Br Br
Rs—Nl’lz \ NaOH, H20 \
/N N
90°C, 1 h
HATU, DIPEA R2 N R2 ,f
DMF, rt, overnight \ \
R1 TI' R1 Tr
XVIII XVII XVI
Route: 4
Route: 3
R —B(0H)23
1. o’o‘B-Blofi‘0
, KOAc, PdC12(dppf)2, DMF, 90°C, 2 h
KOAc, PdClz(dppf)2
DMF, 90°C, 2 h 2. R3—Br 3 11
, K3P04, 3)4, H20, 90°C,
R4 NIH
TFA, DCM, \N
Et38iH, rt, 3 h /
R2 u
Scheme 3
[0273[ Scheme 3 describes another alternative method for preparation zole-
3-carboxamide derivatives (I) by bromination of the indazole 5-position ed by either
Route 1: esterification to form ester XII, then trityl protection ofthe indazole en and then
finally hydrolyzed of the ester to acid XVII, or Route 2: trityl protection of the le
nitrogen directly to acid XVII. The acid is coupled with a variety of amines to produce amide
XVIII which is then coupled with a y of boronic acids (Route 3) to give XIX.
Alternatively, XVIII can be converted to the boronate ester and then couple to a y of
bromides (Route 4) to yield XIX. Final deprotection ofthe indazole nitrogen yields the desired
indazolecarboxamide derivatives (I).
Illustrative Com ound Exam les
[0274[ Preparation of intermediate 3-(5 -bromopyridin-3 -yl)-l, l-dimethylurea
(XXII) is depicted below in Scheme 4.
o E Br
H2" Br I \
l /N Cl Pyridine Y l
+ N /
(WC-60°C, overnight / \
/ N
N \(Ll/
XX XXI XXII
Scheme 4
Sip—1
[0275[ 3-Aminobromo pyridine (XX) (1.0 g, 5.78 mmol) was dissolved in
pyridine and cooled to 0°C before adding dimethyl carbamyl chloride (XXI) (0.683 g, 6.35
mmol). The reaction mixture was stirred at room temperature for 2 h and then heated overnight
at 60°C under argon. The solution was cooled to room temperature, poured into ice water and
extracted with EtOAc. The organic extract was dried over MgSO4, filtered and concentrated to
a residue to afford 3-(5-bromopyridinyl)-l, l-dimethylurea (XXII) as a brown solid, (1.24 g,
.09 mmol, 88% yield). 1H NMR (DMSO-ds) 5 ppm 8.67-8.64 (m, 2H), 8.23 (d, J: 7.8 Hz,
1H), 2.93 (s, 6H), ESIMS found for Ngo m/z 245.05(M+H).
[0276[ The ing intermediates were prepared in accordance with the
procedure described in the above Scheme 4.
N\”/ Br
0 /
XXIII
[0277[ N—(5-bromopyridinyl)morpholinecarboxamide ): Tan solid
(0.82 g, 48%). 1H NMR (DMSO-dg) 3.43-3.45 (m, 4H), .62 (m, 4H), 8.21 (t, J: 2.0 Hz,
1H), 8.26 (d, J = 2.0 Hz, 1H), 8.62 (d, J = 2.2 Hz, 1H), 8.91 (s, 1H), ESIMS found for
C10H12BrN302 m/z 286 (M+H).
0 N/
[0278[ N-(5-bromopyridinyl)cyclopropanecarboxamide (XXIV): Off white
solid, (83% yield), 1HNMR(CDC13, 400 MHz) 5 ppm 8.46-8.39 (m, 3H), 7.54 (bs, 1H), 1.56-
1.50 (m, 1H), 1.13-1.07 (m, 2H), 0.96-0.90 (m, 2H), ESIMS found for C9H9BrN20 m/z 240.85
(M+H).
[0279[ ation of intermediate (XXVI) is depicted below in Scheme 5.
OHC Br Br
\ MezNI-I*HC1 /
1 l
N/ NaBH(OAc)3 \N
TEA, DCE
XXV XXVI
Scheme 5
S£p_1
[0280[ To a solution of 5-bromonicotinaldehyde (XXV) (5.0 g, 26.9 mmol) in
DCE (108 mL) was added dimethylamine-HCl (4.39 g, 53.8 mmol) and TEA (7.5 g, 53.8
mmol). The reaction was stirred at room temperature for 1 h. NaBH(OAc)3 was added and the
on was stirred overnight at room temperature. The reaction was diluted with DCM and
sat. aq. NaHCOg. The organic layer was separated, washed with water, brine, dried and
concentrated under vacuum to produce 1-(5-bromopyridinyl)-N,N-dimethylmethanamine
(XXVI) as a brown liquid (92.6% yield). 1H NMR (CDCl3) 5 ppm 2.15 (s, 6H), 3.43 (s, 2H),
7.94 (s, 1H), 8.47 (d, J=2Hz, 1H), 8.59 (d, J=3Hz, 1H), ESIMS found for C8H11B1‘N2 m/z 215
(MBI79+H) and 217 (MBI81+H).
[0281[ The following ediates were prepared in accordance with the
procedure described in the above Scheme 5.
XXVII
[0282[ 3 -Bromo-5 -(pyrrolidinylmethyl)py1idine (XXVII): Golden liquid (1 .3 5
g, 97% yield). 1H NMR (DMSO-dg) 1.68-1.71 (m, 4H), 2.42-2.44 (m, 4H), 3.60 (s, 2H), 7.96
(s, 1H), 8.48 (d, J=2Hz, 1H), 8.58 (d, J=3Hz, 1H); ESIMS found for C10H13BrN2 m/z 242
(M+H).
O IN/
XXVIII
[0283[ o(pipe1idinylmethyl)py1idine (XXVIII): Brown liquid (13.1
g, 94% yield). 1H NMR (DMSO-dg) 1.36-1.39 (m, 2H), .51 (m, 4H), 2.31-2.32 (m, 4H),
3.46 (s, 2H), 7.94 (s, 1H), 8.47 (d, J=2Hz, 1H), 8.58 (d, J=3Hz, 1H); ESIMS found for
C11H15B1‘N2 m/Z 257 (M+H).
(\N \
\2 l
[0284[ 4-((5-Bromopy1idinyl)methyl)morpholine (XXIX): Brown oil (1.02 g,
.6% yield). ESIMS found for C10H13BrN20 m/z 258 (M+H).
/’©‘/\[j3rN
[0285[ Bromopy1idinyl)methyl)methylpiperazine (XXX): Brown oil
(0.93 g, 64% yield). 1H NMR (DMSO-dg) 2.14 (s, 3H), 2.27-2.37 (m, 8H), 3.49 (s, 2H), 7.95
(s, 1H), 8.47 (d, J=1.7Hz, 1H), 8.59 (d, J=2.2Hz, 1H); ESIMS found for C11H16BrN3 m/z 272
(M+H).
[0286[ 1-(3-Bromofluorobenzyl)methylpiperazine (XXXI): Light yellow
oil (2.07 g, 68% yield). 1H NMR (DMSO-dg) 2.14 (s, 3H), 2.28-2.40 (m, 8H), 3.46 (s, 2H),
7.15-7.17 (m, 1H), 7.35 (s, 1H), 7.40-7.42 (m, 1H); ESIMS found for C12H16BrFN2 m/z 288
(M+H).
[0287[ 1-(5-Bromopyridinyl)piperidinol (XXXII): Brown oil (2.15 g,
7.93mmol, 72.7% yield). 1H NMR (DMSO-dg) 1.34-1.41 (m, 2H), 1.67-1.71 (m, 2H), 2.03-
2.07 (m, 2H), 2.62-2.64 (m, 2H), 3.42-3.46 (m, 1H), 3.47 (s, 2H), 4.55 (d, z, 1H), 7.93-
7.94 (m, 1H), 8.46 (d, J=1.6Hz, 1H), 8.58 (d, J=2.2Hz, 1H), ESIMS found for C11H15BrN20
m/z 272 (M+H).
XXXIII
[0288[ 3-Bromo((3,3-difluoropyrrolidinyl)methyl)pyridine (XXXIII):
Brown liquid (7.38 g, 26.64 mmol, 94.9% yield). 1HNMR (DMSO-dg) 2.21-2.30 (m, 2H), 2.70
(t, J=7Hz, 2H), 2.89 (t, J=13Hz, 2H), 3.66 (s, 2H), 7.95-7.98 (m, 1H), 8.57 (d, J=1.7Hz, 1H),
8.61 (d, J=2.2Hz, 1H), ESIMS found for BrF2N2 m/z 276 (M+H).
[0289[ Preparation of 3-benzylbromopyridine (XXXVI) is depicted below in
Scheme 6.
rXXXV
BI' Bl' Br
\ /
l PdClz(dppf)2,CuI l
N/ THF,50°C \N
XXXIV XXXVI
Scheme 6
[0290[ To a on of 3,5-dibromopyridine (XXXIV) (1.03 g, 4.36 mmol) in
THF (7 mL) under argon was added CuI (50 mg, 0.26 mmol) and PdClz(dppf)2 (178 mg, 0.22
mmol). Benzylzinc(II) bromide (XXXV) (0.5M in THF) (13.09 mL, 6.55 mmol) was slowly
added by syringe. The reaction was heated at 50°C over the weekend. The reaction was
quenched with water and extracted with EtOAc. The EtOAc was separated, washed with water,
brine, dried over MgSO4 and concentrated under vacuum. The residue was purified on a silica
gel column (100% hexanes —> 5:95 hexanes) to afford 3-benzylbromopyridine
(XXXVI) (0.614 g, 2.47 mmol, 57% yield) as a light brown oil. 1H NMR (DMSO-dg) 5 ppm
3.98 (s, 2H), 7.19-7.23 (m, 1H), 7.27-7.32 (m, 4H), .93 (m, 1H), 8.51 (d, J=2Hz, 1H),
8.54 (d, J=3Hz, 1H), ESIMS found for C12H10BrN m/z 248 (M+H).
[0291[ Preparation of 3-bromophenoxypyridine (XXXIX) is depicted below in
Scheme 7.
WO 75858
XXXVIII
Br Br O
\ CsCO3
l mBr / NMP, 100°C \
N N
XXXVII XXXIX
Scheme 7
Sip—1
[0292[ To a solution of 3,5-dibromopyridine (XXXVII) (1.00 g, 4.24 mmol) in
NMP (11 mL) was added phenol (XXXVIII) (398 mg, 4.24 mmol) and CsC03 (1.38 g, 4.24
mmol). The reaction was heated at 100°C over the weekend. The reaction was then partitioned
between EtzO/water. The EtzO was separated, washed with 2X water, brine, dried over MgSO4
and concentrated under vacuum. The residue was purified on a silica gel column (100% s
—> 2:98 EtOAczhexanes) to afford 3-bromo-5 -phenoxypyridine (XXXIX) (535 mg, 2.14 mmol,
50% yield) as a clear oil. 1H NMR (DMSO-dg) 5 ppm 7.13-7.15 (m, 2H), 7.23-7.26 (m, 1H),
7.43-7.46 (m, 2H), 7.69-7.70 (m, 1H), 8.37 (d, J=3Hz, 1H), 8.49 (d, J=2Hz, 1H), ESIMS found
for C11H8BrNO m/z 250 (M+H).
[0293[ Preparation of 1-(5 -bromopyridinyl)methylpiperazine (XL) is
ed below in Scheme 8.
/ \ \
HN N— N/fi
31' Br N Br
\ K/
K2C03, DMF /
l I
/ 120°C, overnight
N \N
XXXVIII XL
Scheme 8
Sip—1
[0294[ To a solution of 3,5-dibromopyridine (XXXVIII) (2.90 g, 12.24 mmol) in
dry DMF (20 mL) was added 1-methylpiperazine (2.987 mL, 26.93 mmol) and K2C03 (5.58 g,
40.39 mmol). The reaction was heated at 120°C overnight. An additional portion of 1-
methylpiperazine (6 mL) was added and heating was continued for r 24 h. The reaction
was poured into ice water and filtered. The filtrate was extracted with 66% MeOH/CHClg. The
organic layer was dried over MgSO4, filtered and trated under vacuum to yield 1-(5-
bromopyridin-3 -yl)methylpiperazine (XL) as a brown viscous oil (2.49 g, 9.76 mmol, 79.8%
yield). ESIMS found for C10H14BrN3 m/z 256 (M+H).
[0295[ The following intermediate was prepared in accordance with the procedure
described in the above Scheme 8.
[0296[ 4-(5-Bromopyridinyl)morpholine (XLI): Yellow solid (1.12 g, 4.61
mmol, 64.9% yield). ESIMS found for C9H11BerO m/z 244.1 (M+H).
[0297[ Preparation of 5-bromo-N-cyclohexylnicotinamide (XLIV) is depicted
below in Scheme 9.
0/NH2 o
XLIII Q
H026 Br Br
\ HATU, DIPEA /
l 12
/ DMF \
Scheme 9
[0298[ To a solution of 5-bromonicotinic acid (XLII) (500 mg, 2.49 mmol) in
DMF (8 mL) was added exanamine (XLIII) (247 mg, 2.49 mmol) and DIPEA (643 mg,
4.98 mmol). The reaction was cooled at 0°C before adding HATU (947 mg, 2.49 mmol). The
reaction was warmed to room temperature and stirred for 4 hrs. The reaction was diluted with
EtOAc, washed with 2X water, brine, dried over MgSO4 and concentrated under vacuum to
yield crude 5-bromo-N-cyclohexylnicotinamide (XLIV). The product was used without filI'tl’lCl‘
purification. ESIMS found for C12H15BrN20 m/z 283 (M+H).
[0299[ Preparation of 3 -5 -(((2R,6S)-2,6-dimethylpiperidin
yl)methyl)pyridine (XLVII) is ed below in Scheme 10.
OHC Br Br
\ NaBH4 HO \
l MeOH ‘
N/ N/
XXV XLV
1. 4M HCl/dioxane
2. $002
Br Br
N \ K2CO3 c| \
/ MeCN, 80°C l
N N
XLVII XLVI
Scheme 10
[0300[ To a on of 5-bromonicotinaldehyde (XXV) (2.05 g, 11.0 mmol) in
MeOH (85 mL) was added NaBH4 (832 mg, 21.99 mmol). The reaction was stirred at room
temperature for 1 h. The on was quenched with saturated aqueous NH4Cl (5 mL). The
reaction was concentrated under vacuum and the residue was partitioned between saturated
s NH4Cl/EtOAc. The organic layer was separated, washed with water, brine, dried over
MgSO4 and concentrated under vacuum to yield crude (5 -bromopyridin-3 -yl)methanol (XLV)
as a golden oil (1.54 g, 8.2 mmol, 74% yield). The product was used without filI'tl’lCl‘
purification. ESIMS found for C6H6BrNO m/z 188 (M+H).
SE1;2
[0301[ mopyridinyl)methanol (XLV) (1.54 g, 8.2 mmol) was treated
with 4M HCl in dioxane (10 mL) at 0°C and then evaporated. The residue was dissolved in
SOClz (4 mL) and refluxed for 2 hrs. The SOClz was d and the residue was triturated
with hexane to produce HCl salt of 3-bromo-5 -(chloromethyl)pyridine (XLVI) as a brown solid
(1.30 g, 5 .4 mmol, 66% yield). The t was used without fiirtherpurification. ESIMS found
for C6H5BrClN m/z 206 (M+H).
Sip—3
[0302[ To a solution of 3-bromo(chloromethyl)pyridine (XLVI) (1.17 g, 4.8
mmol) in MeCN (0.2 mL) and (2S,6R)-2,6-dimethylpiperidine (2.6 mL, 19.3 mmol) was added
K2C03 (667 mg, 4.8 mmol). The reaction was refluxed for 5 hrs. TLC showed the presence of
starting material so additional (2S,6R)-2,6-dimethylpiperidine (2.0 mL, 14.8 mmol) was added
and the reaction was refluxed for an additional 5 hrs. The solvent was removed and the e
was partitioned between EtOAc/water. The EtOAc was separated and washed with brine, dried
over MgSO4 and concentrated under vacuum. The residue was purified on a silica gel column
(100% hexanes —> 6:94 EtOAczhexanes) to afford 3-bromo(((2R,6S)-2,6-dimethylpiperidin-
1-yl)methyl)pyridine ) as a clear oil (728 mg, 2.57 mmol, 53% yield). 1H NMR
(DMSO-ds) 5 ppm 0.92 (d, J=8Hz, 6H), 1.21-1.32 (m, 3H), 1.52-1.55 (m, 2H), 1.59-1.63 (m,
1H), 2.42-2.46 (m, 2H), 3.73 (s, 2H), 7.97-7.98 (m, 1H), 8.50 (d, J=3Hz, 1H), 8.55-8.56 (m,
1H), ESIMS found for C13H19BrN2 m/z 283 (M+H).
[0303[ Preparation of intermediate 3'-fluorobiphenyl-3 -amine (L1) is depicted
below in Scheme 11.
F F
<5 xux
OzN Br Ila OZN HzN
OH O Pd/C-Hz
K3P04, Pd(PPh3)4, H20, EtOH, rt, 5 h O
Dionne, MW, 95°C, 2 h
L LI
XLVIII
Scheme 11
SE1;1
[0304[ A 25 mL microwave vessel was charged with 1-bromonitrobenzene
(XLVIII) (0.61 g, 3.0 mmol), 3-fluorophenylboronic acid (XLIX) (0.46 g, 3.3 mmol),
potassium ate tribasic (0.95 g, 4.5 mmol), 1,4-dioxane (15.0 mL), and water (3.0 mL).
Tetrakis(triphenylphosphine)palladium(0) (0.17 g, 0.15 mmol) was added, and the reaction was
placed in a microwave reactor for 1 h at 95°C. An additional 3-fluorophenylboronic acid (0.20
g) and is(triphenylphosphine)palladium(0) (0.05 g) were added, and the reaction was
heated for another 1 h at 95°C in a microwave r. The organic solvent was separated from
the water and concentrated to a residue. The residue was then purified by flash chromatography
using a 25 g n normal phase silica gel cartridge (100% hexanes —> 1:99
hexanes) to afford 3'-fluoronitrobiphenyl (L) (0.63 g, 2.91 mmol, 97% yield) as a
white solid. 1H NMR ds) 5 ppm 8.48 (t, J: 2.0 Hz, 1H), 8.26-8.24 (m, 1H), 8.20-8.18
(m, 1H), 7.78 (t, J=8Hz, 1H), 7.70-7.68 (m, 1H), 7.67-7.65 (m, 1H), 7.59-7.56 (m, 1H), 7.32-
7.28 (m, 1H).
Sip—2
[0305[ 10% Palladium on carbon g) was added to a solution of 3'-fluoro
nitrobiphenyl (L) (0.63 g, 2.88 mmol) in EtOH (20.0 mL). The flask was evacuated and
replaced with a hydrogen atmosphere. The solution was stirred at room temperature for 5 h
under hydrogen. The catalyst was filtered through a pad of Celite, and the solvent was removed
under reduced pressure. The residue was purified by flash chromatography using a 40 g
Thomson normal phase silica gel cartridge (100% hexanes —> 15:85 EtOAczhexanes) to afford
3'-fluorobiphenylamine (LI) (0.34 g, 1.81 mmol, 63% yield) as a light yellow oil. 1H NMR
(DMSO-ds) 5 ppm 7.47-7.44 (m, 1H), 7.40-7.39 (m, 1H), 7.36-7.33 (m, 1H), 7.15-7.14 (m, 1H),
7.10 (t, z, 1H), 6.85-6.84 (m, 1H), 6.80-6.79 (m, 1H), 6.60-6.58 (m, 1H), 5.18 (s, 2H),
ESIMS found for C12H10FN m/z 188 (M+H).
[0306[ Preparation of intermediate 5-(3-fluorophenyl)pyridinamine (LIII) is
depicted below in Scheme 12.
HZN Br Ho‘s/Q
\ HZN
| OH
N/ K3P04, 3)4, H20, N/
DMF, MW, 180°C, 1 h
LII LlII
Scheme 12
Sip—1
[0307[ To a microwave vial was added 3-aminobromopyridine (LII) (0.400 g,
2.31 mmol), 3-fluorophenyl boronic acid (XLIX) (0.356 g, 2.54 mmol),
tetrakis(triphenylphosphine)palladium(0) (0.133 g, 0.116 mmol), potassium phosphate (0.736
g, 3.47 mmol), water (1 mL), and DMF (5 mL). The reaction vial was capped, purged with
argon and heated under microwave irradiation for l h at 180°C. The solution was filtered
through a pad of Celite and trated under vacuum. The residue was purified by column
chromatography (4:6 EtOAczhexanes —> 7:3 EtOAczhexanes) to afford the 5-(3-
fluorophenyl)pyridinamine (LIII) (0.360 g, 1.92 mmol, 83% yield) as a yellow-white solid.
ESIMS found for C11H9FN2 m/z 189.1 (M+H).
[0308[ Preparation of intermediate methylamino)methyl)pyridinamine
(LVII) is depicted below in Scheme 13.
OHC Br \N Br
\ \
I (CH3)2NH*HCI, EtaN, NaBH(0Ac)3
I I
N/ DCE, rt, overnight N/
XXV LIV
MeOOm
Cs2C03, Xanthphos
Pd2(dba)3,
Xylene. MW
130°C, 5 h
\T NH2 \
\ \
I TFA, rt, 111 T I
N/ /
LVII LVI
Scheme 13
[0309[ 5-Bromonicontinaldehyde (XXV) (5.01g, 26.9 mmol) and dimethylamine
hloride (4.39 g, 53.8 mmol) were suspended in 1,2-dichloroethane (108 mL).
Triethylamine (7.50 mL, 53.8 mmol) was added, and the reaction was stirred at room
temperature for 1 h. Sodium triacetoxyborohydride (8.56 g, 40.4 mmol) was added, and the
reaction was fithher stirred at room temperature overnight. The reaction was diluted with
saturated sodium bicarbonate solution and DCM. The organic layer was separated, washed
sequentially with water and brine, dried over MgSO4, filtered and concentrated to give 1-(5-
bromopyridinyl)-N,N-dimethylmethanamine (LIV) (1.19 g, 23.9 mmol, 89% yield) as a
brown oil: 1H NMR (DMSO-dg) 5 ppm 8.59 (d, J =3Hz, 1H), 8.47 (d, J=2Hz, 1H), 7.94 (s,
1H), 3.43 (s, 2H), 2.15 (s, 6H), ESIMS found for C8H11B1‘N2 m/z 215 (M+H).
S£p_2
[0310[ In a 25 mL microwave vessel, 1-(5-bromopyridinyl)-N,N-
dimethylmethanamine (LIV) (1.27 g, 5.92 mmol), 4-methoxybenzylamine (LV) (0.77 mL, 5.92
mmol), cesium carbonate (2.70 g, 8.29 mmol) and xanthphos , 0.30 mmol) were
suspended in xylenes (12.0 mL). The solvent was degassed, and
tris(dibenzylideneacetone)dipalladium(0) (0.27 g, 0.30 mmol) was added. The vessel was
sealed, and the reaction was heated to 130°C for 5 h in a microwave reactor. The solvent was
ed away from the solid material and concentrated to a residue. The residue was d
by silica gel tography using a 40 g Thomson normal-phase silica gel cartridge (100%
CHC13 —> 3:97 MeOH[7N HC13) to afford 5-((dimethylamino)methyl)-N-(4-
methoxybenzyl)pyridinamine (LVI) (0.68 g, 2.49 mmol, 42% yield) as a yellow solid. 1H
NMR (DMSO-ds) 5 ppm 7.84 (d, J=3Hz, 1H), 7.64 (d, J=2Hz, 1H), 7.27 (d, J=11Hz, 2H), 6.88
(d, J=11Hz, 2H), 6.83-6.82 (m, 1H), 6.35 (t, J=8Hz, 1H), 4.20 (d, J=8Hz, 2H), 3.72 (s, 3H),
3.24 (s, 2H), 2.08 (s, 6H), ESIMS found for C16H21N30 m/z 272 (M+H).
[031 1 [ 5 -((dimethylamino)methyl)-N-(4-methoxybenzyl)pyridin-3 -amine (LVI)
(0.15 g, 0.56 mmol) was dissolved in TFA (2.0 mL) and stirred at room temperature for 1 h.
The TFA was removed, and the e was treated with 7N ammonia in hloroform
mixture (7/93) to neutralize the TFA and concentrated again to a residue. The residue was
purified by flash silica gel chromatography utilizing a 4 g Thomson normal-phase silica gel
cartridge (100% CHC13 —> 3:97 MeOH[7N NH3]:CHC13) to afford 5-
((dimethylamino)methyl)pyridinamine (LVII) (0.044 g, 0.29 mmol, 52% yield) as a brown
oil. ESIMS found for C8H13N3 m/z 152 (M+H).
[0312[ The following ediate was prepared in accordance with the procedure
described in the above Scheme 13.
HzN /
| ”/W
\N K/
LVIII
[0313[ 5 -((4-Methylpiperazin- l -yl)methyl)pyridin-3 -amine ): Dark
yellow solid (138 mg, 0.67 mmol, 71% yield). ESIMS found for C11H18N4 m/z 207 (M+H).
[0314[ Preparation of intermediate 6-(pyrrolidin-l-ylmethyl)pyridin-3 -amine
(LXIII) is depicted below in Scheme 14.
o N o N
2 m 2
DIBAL,DCM, \
/ mm to rt 3h’ /
N COZMe N CHO
LIX LX
i / EtaN,NaBH(OAc)3
DCE, rt, overnight
H N O N
o ‘0 o
N/ N EtOH,rt,5h N/ N
LXIII LXII
Scheme 14
[0315[ To a sion of methyl 5-nitropicolinate (LIX) (1.282 g, 7.03 mmol)
in DCM (25 mL) d at -78°C under argon was slowly added DIBAL (1M in toluene) (9.14
mL, 9.14 mmol). The solution was allowed to warm to room ature over 3 h. An aqueous
solution of potassium sodium tartrate was added, d fithher with water and DCM. The
solution was stirred at room temperature for another 30 min before the organic layer was
separated. The aqueous layer was extracted 2X DCM, combined with the organic layer, dried
over MgSO4, filtered and evaporated under reduced pressure. The residue was purified by
column chromatography to produce 5-nitropicolinaldehyde (LX) as a brown oil (0.64 g, 4.2
mmol, 60% yield). 1H NMR (DMSO-ds) 5 ppm 8.17 (d, J=9Hz, 1H), 8.81 (dd, J=9Hz, J=2Hz,
1H), 9.56 (d, J=2Hz, 1H), 10.08 (s, 1H).
[0316[ Preparation of 5-nitro(pyrrolidin-l-ylmethyl)pyridine (LXII) was
performed following the procedure listed in Scheme 5, Step 1. Purple oil (0.41 g, 1.98 mmol,
86% yield). 1H NMR (DMso-dé) 8 ppm 9.28 (d, J=3Hz, 1H), 8.56 (dd, J=11Hz, 3H2, 1H),
7.72 (d, J=11Hz, 1H), 3.85 (s, 2H), 2.53-2.50 (m, 4H), 1.75-1.70 (m, 4H).
[0317[ Preparation of intermediate 6-(pyrrolidinylmethyl)pyridin-3 -amine
(LXIII) was performed following the ure listed in Scheme 11, Step 2. Dark brown oil
(0.35 g, 1.97 mmol, quantitative). ESIMS found for C10H15N3 m/z 178 (M+H).
[0318[ The following intermediate was prepared in accordance with the procedure
described in the above Scheme 14.
\ N/
[0319[ 6-((4-Methylpiperazinyl)methyl)pyridinamine (LXIV): Brown oil
(120 mg, 0.58 mmol, 100% yield). ESIMS found for C11H18N4 m/z 207 (M+H).
[0320[ Preparation of intermediate 6-(3 phenoxy)pyridin-3 -amine
(LXVIII) is depicted below in Scheme 15.
120°C’ overni htg
C I N/ o
LXV LXVII
Pd/C-
EtOH, db, :1
N/ O
LXVIII
Scheme 15
[0321[ A solution of 2-chloronitropyridine (LXV) (1.98 g, 12.5 mmol) and 3-
fluorophenol (LXVI) (1.4 g, 12.5 mmol) in pyridine (20 mL) was heated at 120°C overnight
under argon. The solution was cooled to room temperature and trated under vacuum.
The residue was dissolved in EtOAc, washed with water, brine, dried over MgSO4 and
evaporated. The residue was purified by silica gel column chromatography (100% hexane —>
2:98 EtOAczhexane) to give 2-(3 -fluorophenoxy)-5 -nitropyridine (LXVII) as a yellow viscous
oil (2.27 g, 9.7 mmol, 77% . 1H NMR (DMSO-ds) 5 ppm 7.11 (dd, J=8Hz, J=2Hz, 1H),
7.17 (dt, J=8Hz, J=6Hz, 1H), 7.23 (td, J=10Hz, J=2Hz, 1H), 7.31 (d, J=9Hz, 1H), 7.52 (q,
J=9Hz, 1H), 8.64 (dd, J=9Hz, J=3Hz, 1H), 9.05 (d, J=3Hz, 1H), ESIMS found for C11H7FN203
m/Z 234.9 (M+H).
Sip—2
[0322[ Preparation of intermediate 6-(3-fluorophenoxy)pyridinamine
(LXVIII) was performed following the procedure listed in Scheme 11, Step 2. Black green
s oil (1.90 g, 9.3 mmol, 96% yield). 1H NMR (DMSO-dg) 5 ppm 5.18 (brs, 2H), 6.74-
6.83 (m, 3H), 6.90 (dt, 1H), 7.09 (dd, J=9Hz, J=3Hz, 1H), 7.34 (q, J=7Hz, 1H), 7.57 (d, J=3Hz,
1H), ESIMS found for C11H9FN20 m/z 204.4 (M+).
[0323[ The following intermediates were prepared in accordance with the
procedure described in the above Scheme 15.
[0324[ 6-(4-Fluorophenoxy)pyridinamine (LXIX): Dark brown oil (870 mg,
4.3 mmol, 100% . 1HNMR (DMSO-dg) 5ppm 5.08 (brs, 2H), 6.75 (d, J=15Hz, 1H), 6.90-
7.01 (m, 2H), 7.07 (dd, J=9Hz, J=3Hz, 1H), 7.16 (t, 9Hz, 1H), 7.26-7.30 (m, 1H), 7.73 (d,
J=3Hz, 1H), ESIMS found for C11H9FN20 m/z 204.9 (M+H).
N/ o
[0325[ 6-(2-Fluorophenoxy)pyridin-3 -amine (LXX): Dark brown oil (61 1 mg, 3 .0
mmol, 91% yield). ESIMS found for N20 m/z 204.9 (M+H).
[0326[ Preparation ofintermediate 6-phenylpyridin-3 -amine (LXXIV) is depicted
below in Scheme 16.
LXXII
B(OH)2
O N O N
2 \ 2 \
I Pd(PPh3)4,K3P04
N/ dioxane/HZO, 95°C
Br N/
LXXI LXXIII
EtOH,6h,rt
HZN \
LXXIV
Scheme 16
Sip—1
[0327[ To a solution of 2-bromonitropyridine (LXXI) (302 mg, 1.49 mmol) in
a mixture of dioxane (14 mL) and water (3 mL) was added phenylboronic acid (LXXII) (199
mg, 1.64 mmol), Pd(PPh3)4 (86 mg, 0.74 mmol) and K3PO4 (473 mg, 2.23 mmol). The reaction
was microwaved at 95°C for 1h. The reaction was cooled and the organic phase was separated,
dried over MgSO4 and evaporated under vacuum. The residue was purified by silica gel column
chromatography (100% hexane —> 5:95 EtOAczhexane) to give 5-nitrophenylpyridine
(LXXIII) as off-white needles (254 mg, 1.27 mmol, 85% yield). ESIMS found for C11H8N202
m/z 200.9 (M+H).
SE1;2
[0328[ Preparation of intermediate 6-phenylpyridinamine ) was
performed following the ure listed in Scheme 11, Step 2. Black green viscous oil (211
mg, 1.24 mmol, 98% yield). 1H NMR (DMSO-ds) 5 ppm 5.45 (s, 2H), 6.99 (dd, J=11Hz,
J=3Hz, 1H), 7.25-7.28 (m, 1H), 7.38-7.40 (m, 2H), 7.62 (d, J=11Hz, 1H0, .91 (m, 1H),
8.02 (d, J=3Hz, 1H), ESIMS found for C11H10N2 m/z 171 (M+H).
[0329[ The following intermediates were ed in accordance with the
procedure described in the above Scheme 16.
HZN \
/ F
[0330[ 6-(3-Fluorophenyl)pyridinamine (LXXV): Brown oil (252 mg, 1.34
mmol, 98% yield). ESIMS found for C11H9FN2 m/z 189 (M+H).
HZN /
LXXVI
[0331[ 6-(4-Fluorophenyl)pyridinamine (LXXVI): Deep purple oil (202 mg,
1.07 mmol, 98% yield). ESIMS found for C11H9FN2 m/z 189 (M+H).
[0332[ ation of intermediate ylpyridinamine (LXXX) is depicted
below in Scheme 17.
O‘B/ I
OZN Br OZN
\ \
| Pdc12(dppf)z,K3P04 |
N/ dioxane/HZO, 90°C N/
LXXVII LXXIX
Pd/C-Hz
EtOH,6h,rt
HZN \
Scheme 17
Sir;1
[0333[ To a solution of 3-bromonitropyridine (LXXVII) (295 mg, 1.45 mmol)
in dioxane (14 mL) was added 2-benzyl-4,4,5,5-tetramethyl-1,3,2-dioxaborolane (LXXVIII)
(420 uL, 1.89 mmol), PdClz(dppf)2, (120 mg, 0.15 mmol) and 2M s K3PO4 (2.2 mL,
4.36 mmol). The reaction was microwaved at 90°C for 2h. The reaction was cooled and the
organic phase was separated, dried over MgSO4 and evaporated under vacuum. The residue
was purified by silica gel column tography (100% hexane —> 6:94 EtOAczhexane) to
give 3-benzylnitropyridine (LXXIX) as brown oil (117 mg, 0.54 mmol, 37% yield). 1H
NMR (DMSO-dg) 5 ppm 4.16 (s, 2H), 7.21-7.25 (m, 1H), 7.31-7.33 (m, 4H), 8.45-8.46 (m,
1H), 8.93 (d, J=2Hz, 1H), 9.21 (d, J=3Hz, 1H), ESIMS found for C12H10N202 m/z 215 (M+H).
Sip—2
[0334[ Preparation of 5-benzylpyridinamine (LXXX) was performed
following the procedure listed in Scheme 11, Step 2. Black green viscous oil (139 mg, 0.75
mmol, 98% yield). ESIMS found for C12H12N2 m/z 185 (M+H).
[0335[ Preparation of intermediate 2-(4-methylpiperazinyl)pyridin-3 -amine
(LXXXIV) is depicted below in Scheme 18.
O N2 H N
\ HN\) LXXXJI 02"
\ 2
l Pd/C-Hz I
Cs2C03, Xanthphos, Pd2(dba)3, MeOH, rt, 16 h
Cl N/ (\N N/ N N/
Xylene, MW, 90°C, 2 h
N\J N
/ / Q
LXXXI LXXXJII LXXXIV
Scheme 18
Sip—1
[0336[ To a microwave vial was added 2-chloronitropyridine (LXXXI) (1.00
g, 6.31 mmol), ylpiperazine (LXXXII) (0.758 g, 7.57 mmol), cesium carbonate (2.88 g,
8.83 mmol), Pd2(dba)3 (0.173 g, 0.189 mmol), xanthphos (0.109 g, 0.189 mmol), and dioxane
(5 mL). The reaction vial was capped and purged with argon. The solution into the reaction vial
was heated under microwave irradiation for 2 h at 90°C. The solution was filtered through a
pad of Celite and trated to a residue under vacuum. The residue was purified by column
chromatography (1:99 MeOHzCHC13 —> 8:92 MeOHzCHClg) to afford l-methyl(3-nitro-
nyl)-piperazine (LXXXIII) (1.30 g, 5.85 mmol, 93% yield) as a brown oil.
Sip—2
[0337[ To a ng solution of 1-methyl(3-nitro-pyridinyl)-piperazine
(LXXXIII) (1.30 g, 5.85 mmol) in MeOH (15 mL) was added 10% Pd/C. The solution was
purged with hydrogen. The solution was d at room temperature for 16 h under hydrogen.
The solution was filtered through a pad of Celite and concentrated to a residue under vacuum.
The residue was purified by column chromatography (100% CHC13 —> 2:98 MeOH[7N
NH3]:CHC13) to afford ethylpiperazinyl)pyridinamine V) (0.466 g, 2.42
mmol, 52% yield) as a tan solid. ESIMS found for C10H16N4 m/z 192.4 (M+H).
[0338[ The following intermediates were prepared in accordance with the
procedure described in the above Scheme 18.
HZN /
~ "0
LXXXV
[0339[ 6-(Pyrrolidinyl)pyridinamine (LXXXV): Deep purple oil (1.43 g,
8.77 mmol, 100% yield). ESIMS found for C9H13N3 m/z 164 (M+H).
N N/fi
LXXXVI
[0340[ 6-(4-Methylpiperazinyl)pyridinamine (LXXXVI): Purple solid (598
mg, 3.11 mmol, 32% yield). ESIMS found for C10H16N4 m/z 193 (M+H).
LXXXVII
[0341[ 6-Morpholinopyridinamine (LXXXVII): Purple solid (782 mg, 4.36
mmol, 95% yield). ESIMS found for C9H13N30 m/z 180 (M+H).
HzN /
\N N/\/N\
LXXXVIII
[0342[ NZ-(Z-(Dimethylamino)ethyl)-N2-methylpyridine-2,5 -diamine
(LXXXVIII): Deep purple oil (1.55 g, 7.98 mmol, 96% yield). ESIMS found for C10H18N4 m/z
195 (M+H).
[0343[ ation of intermediate 1-(5-aminopyridinyl)piperidinol (XCI)
is depicted below in Scheme 19.
moron LXXXIX
0mm 02"
DMF \
N/ 85°C, overnight
CI N/ N
LXV xc QC”
EtOH, 6h, rt
Scheme 19
S£p_1
[0344[ To a solution of 2-chloronitropyridine (LXV) (5.0 g, 31.5 mmol) in
DMF (50 mL) was added piperidinol (LXXXIX) (3.5 g, 34.65 mmol) and K2C03 (8.7 g,
63 .0 mmol). The reaction was headed at 85°C overnight. The solution was poured into ice water,
stirred for 15 min and then filtered. The solid was washed with cold water and dried under
vacuum to produce 1-(5-aminopyridinyl)piperidinol (XC) as ayellow solid (6.62 g, 29.67
mmol, 94.2% yield). 1H NMR (DMSO-ds) 5 ppm 1.34-1.42 (m, 2H), 1.77-1.83 (m, 2H), 3.40-
3.56 (m, 2H), 3.76-3.83 (m, 1H), 4.12 (brd, 2H), 4.81 (d, J=4Hz, 1H), 6.94 (d, J=10Hz, 1H),
8.17 (dd, J=10Hz, J=3Hz, 1H), 8.94 (d, J=3Hz, 1H), ESIMS found for C10H13N303 m/z 224.1
(M+H).
Sfip_2
[0345[ Preparation of intermediate 1-(5-aminopyridinyl)piperidinol (XCI)
was performed ing the procedure listed in Scheme 11, Step 2. Dark brown oil (5.7 g, 29.5
mmol, 99.5% yield). 1H NMR (DMSO-dg) 5 ppm 1.36 (tq, J=13Hz, J=4Hz, 2H), 1.72-1.76 (m,
2H), 2.79 (dt, J=13Hz, J=3Hz, 2H), 3.54-3.61 (m, 1H), 3.70-3.78 (m, 2H), 4.49 (s, 2H), 4.61
(d, J=4Hz, 1H), 6.61 (d, J=9Hz, 1H), 6.88 (dd, J=9Hz, J=3Hz, 1H), 7.57 (d, J=3Hz, 1H),
ESIMS found for C10H15N30 m/z 194.1 (M+H).
[0346[ The following intermediates were ed in accordance with the
procedure described in the above Scheme 19.
[0347[ 6-(Piperidinyl)pyridinamine (XCII): Dark red Viscous oil (4.93 g,
27.81 mmol, 95.9% yield). 1H NMR (DMSO-dg) 5 ppm 1.48-1.71 (m, 8H), 3.42-3.53 (m, 2H),
4.48 (brs, 2H), 6.59 (d, J=9Hz, 1H), 6.89 (dd, J=9Hz, J=3Hz, 1H), 7.58 (d, J=3Hz, 1H), ESIMS
found for C10H15N3 m/z 178.0 (M+H).
HZNKID\
XCIII
[0348[ 5-Methyl(pyrrolidinyl)pyridinamine (XCIII): Dark blue Viscous
oil (2.06 g, 12.62 mmol, 100% yield). 1H NMR (DMSO-ds) 5 ppm 1.76-1.82 (m, 4H), 2.13 (s,
3H), .20 (m, 4H), 4.53 (brs, 2H), 6.74 (d, J=3.5Hz, 1H), 7.42 (d, J=2.7Hz, 1H), ESIMS
found for C10H15N3 m/Z 178.1 (M+H).
[0349[ 6-(Azetidinyl)-5 -methylpyridin-3 -amine (XCIV): Dark red solid (2.0 g,
11.29 mmol, 86.9% yield). 1H NMR (DMSO-dg) 5 ppm 2.11 (quin, J=7Hz, 2H), 3.76-3.87 (m,
4H), 4.50 (brs, 2H), 6.72 (d, J=2.5Hz, 1H), 7.38 (d, J=2.5Hz, 1H); ESIMS found for C9H13N3
m/z 164.4 (M+H).
[0350[ 6-(Azetidinyl)pyridinamine (XCV): Burgundy solid (1.45 g, 9.70
mmol, 99.3% yield). ESIMS found for C8H11N3 m/z 149.0 (M+H).
[0351[ Preparation of intermediate tert—butyl 4-(5-aminopyridinyl)piperazine-
1-carboxylate (XCVIII) is depicted below in Scheme 20.
OzN HN N—Boc XCVI OZNU
N/ EtOH, 70 C, 16 h0
CI N
LXV XCVII K/N\Boc
EtOH, 6h, rt
N N
XCVIII K/N\
Scheme 20
[0352[ To a solution of 2-chloronitropyridine (LXV) (2.0 g, 12.6 mmol) in
EtOH (20 mL) was added tert—butyl piperazinecarboxylate (XCVI) (7.05 g, 37.9 mmol). The
reaction was headed at 70°C for 16 h. The reaction was concentrated under vacuum and then
dissolved in EtOAc. The EtOAc was washed with 1 M NaOH, brine and then dried over MgSO4
to give tert-butyl 4-(5-nitropyridinyl)piperazinecarboxylate ) as a yellow solid
(4.94 g). ESIMS found for C14H20N4O4 m/z 309.0 (M+H).
Sflp_2
[0353[ Preparation of intermediate tert—butyl 4-(5-aminopyridinyl)piperazine-
1-carboxylate (XCVIII) was med following the ure listed in Scheme 11, Step 2.
Purple solid (990 mg, 3.56 mmol, quantitative). ESIMS found for C14H22N402 m/z 278.8
(M+H).
[0354[ Preparation of intermediate N—(3 -aminopyridinyl)
cyclopropanecarboxamide (C11) is depicted below in Scheme 21.
XCIX CI
Pd/C-Hz
EtOH, 6h, rt
Scheme 21
[0355[ Preparation of N—(3 -nitropyridinyl)cyclopropanecarboxamide (CI) was
performed following the procedure listed in Scheme 4, Step 1. Orange solid (130 mg, 0.93
mmol, 13% yield). ESIMS found for C9H9N303 m/z 207.8 (M+H).
S£p_2
[0356[ Preparation of intermediate N—(3-aminopyridinyl)
cyclopropanecarboxamide (CII) was performed following the procedure listed in Scheme 11,
Step 2. Dark grey solid (100 mg, 0.56 mmol, quantitative). ESIMS found for 30 m/z
178.3 (M+H).
[0357[ Preparation of intermediate (5 -aminopyridinyl)(pyrrolidin- l -
hanone (CV) is depicted below in Scheme 22.
‘3sz HATU, DIPEA
N/ DMF, rt,2h D
Pd/C-Hz
EtOH,6h,rt
HZN \
K .0
CV 0
Scheme 22
[0358[ To a solution of 5-nitropicolinic acid (CIII) (500 mg, 2.97 mmol) in DMF
(15 mL) was added pyrrolidine (244 pl, 2.47 mmol) and DIPEA (1.03 mL, 5.95 mmol). The
reaction was cooled at 0°C before adding HATU (1.13 g, 2.47 mmol). The reaction was warmed
to room temperature and stirred for 2 hrs. The reaction was concentrated under vacuum and
then dissolved in a mixture of water and 10% CHClg. The organic layer was separated
and the aqueous phase was washed again with 10% CHClg. The combined organic
phases were washed with brine, dried over MgSO4 and evaporated to yield (5 -nitropyridin
yl)(pyrrolidinyl)methanone (CIV) as a red solid (849 mg). ESIMS found for C10H11N303
m/z 222.1 (M+H).
S£p_2
[0359[ Preparation of intermediate (5-aminopyridinyl)(pyrrolidin
yl)methanone (CV) was performed following the procedure listed in Scheme 1 1, Step 2. Yellow
solid (708 mg, 7.3 mmol, 96.4% yield). ESIMS found for C10H13N30 m/z 191.4 (M+H).
[0360[ The following intermediate was prepared in ance with the procedure
described in the above Scheme 22.
[0361[ 5-Amino-N-cyclopentylpicolinamide (CVI): Yellow solid (450 mg, 2.19
mmol, 93.7% yield). ESIMS found for C11H15N30 m/z 206.1 (M+H).
[0362[ Preparation of intermediate 6-(methylsulfonyl)pyridinamine (CIX) is
depicted below in Scheme 23.
02" \ NaSMe 02" \ 02"
mCPBA \
I THF/H o | |
N/ 2 DCM
Cl N/ SMe /°,/s<o
LXV CVII CVIII
Pd/C-H2
EtOH,6h,rt
HZN \
N 052;,
Scheme 23
Sip—1
[0363[ To a solution of sodium thiomethoxide in THF (53 mL) and H20 (20 mL)
cooled to 0°C was added 2-chloronitropyridine (LXV) (5.09 g, 32.09 mmol). The reaction
was warmed to room temperature and d for 2 hrs. The reaction was poured into ice water
and stirred for 10 minutes, filtered, washed with water, dried under vacuum to yield 2-
(methylthio)nitropyridine (CVII) as a yellow solid (5.14 g, 30.20 mmol, . 1H NMR
dg) 8ppm 2.62 (s, 3H), 7.57 (d, J=8.9Hz, 1H), 8.38 (d,J=8.9Hz, 1H), 9.22 (d, J=2.7Hz,
1H); ESIMS found for C6H6N2028 m/z 171.1 (M+H).
S£p_2
[0364[ To a solution of 2-(methylthio)nitropyridine (CVII) (502 mg, 2.95
mmol) in DCM (60 mL) was mCPBA (1.33 g, 5.90 mmol). The reaction was stirred at room
temperature for 1 hr. Two additional portions of mCPBA (2 X 250 mg) were added at 1 hr
intervals for a total reaction time of 4 hr. The reaction was poured into saturated aqueous
. The organic phase was separated and washed with water, brine and then dried over
MgSO4. The solvent was removed under vacuum to produce crude 2-(methylsulfonyl)
nitropyridine (CVIII) (854 mg) which was used without purification for step 3. ESIMS found
for 04S m/z 203.0 (M+H).
Sip—3
[0365[ Preparation ofintermediate 6-(methylsulfonyl)pyridin-3 -amine (CIX) was
performed following the procedure listed in Scheme 11, Step 2. The crude product was used as
is without purification. ESIMS found for CgHgNzozs m/z 173.0 (M+H).
[0366[ Preparation of ediate 5-iodo(tetrahydro-2H-pyranyl)-1H-
indazolecarbaldehyde (CXIV) is depicted below in Scheme 24.
{I"NJ
:3chozlxk
\N NHOMe(Me)*HCl, o
N’ imidazole,DMF, 65°C , r..t "x"
DHP,PPTS
DCM, reflux
\©:<:oXIVOLASTHF, 0°C
CXIH ob
Scheme 24
Step 1
[0367[ 1H—indazolecarboxylic acid (CX) (100 g, 617 mmol) in DMF was
treated with carbonyldiimidazole (110 g, 678 mmol) at room temperature until the evolution of
gas ceased (ca. 15 minutes). The reaction was heated to 60-65°C for 2 h and then allowed to
cool to room temperature. methylhydroxylamine-HCl (66.2 g, 678 mmol) was added as
a solid and the e was heated to 65°C for 3 h. The reaction was concentrated to a paste,
taken up in DCM and washed uently with water and 2 N HCl. The product could be
seen coming out of solution. The solid was filtered and rinsed separately with EtOAc. The
EtOAc and DCM layers were separately washed with sodium bicarbonate followed by brine,
dried over MgSO4 and concentrated under reduced pressure. The resulting solids were
ed, triturated with 1: 1 mixture of DCM-ether, filtered, and dried to produce N—methoxy-
N—methyl-1H-indazolecarboxamide (CXI) as a white solid (100 g, 487 mmol, 79% yield).
1H NMR (DMSO-ds) 8 ppm 3.46 (s, 3H), 3.69-3.85 (m, 3H), 7.13-7.31 (m, 1H), 7.41 (t, J=7.25
Hz, 1H), 7.56-7.65 (m, 1H), 7.93-8.08 (m, 1H), ESIMS found for C10H11N302 m/z 206 (M+H).
[0368[ To N-methoxy-N—methyl-1H-indazolecarboxamide (CXI) (20 g, 97.4
mmol) in DCM (1 L) was added (Bis(trifluoroacetoxy)iodo)benzene (46 g, 107 mmol) followed
by portionwise addition ofiodine (14.84 g, 58.5 mmol) at room temperature. After 1 h, saturated
aqueous NaHS03 (600 mL) was added and a solid began to precipitate which was filtered and
rinsed with excess DCM. The filtrate was washed with brine, dried over MgSO4, concentrated
and the remaining solid was ated with a minimal amount of DCM. The combined solids
were dried under vacuum over KOH to produce 5-iodo-N-methoxy-N-methyl-1H-indazole
carboxamide (CXII) as a white solid (23.2 g, 70 mmol, 72% yield). 1H NMR (DMSO-ds) 5
ppm 3.45 (s, 3H), 3.77 (s, 3H), 7.45-7.54 (m, 1H), 7.66 (dd, , 1.51 Hz, 1H), 8.40 (d,
J=1.01 Hz, 1H), ESIMS found for IN302 m/Z 331 (M+H).
Sip—3
[0369[ A mixture of 5-iodo-N-methoxy-N-methyl-1H-indazolecarboxamide
(CXII) (16.5 g, 50 mmol), 3,4-dihydro-2H—pyran (10.3 mL, 113 mmol) and PPTS (0.12 g, 0.6
mmol) in DCM was heated to reflux for 5 h. The solution was poured into a saturated aqueous
NaHC03 solution, the layers were separated, and the aqueous layer was extracted with DCM.
The combined organic layers were washed with 5% aqueous citric acid and brine, dried over
MgSO4, and concentrated. The crude product was purified on a silica gel column (100% EtOAc
—> 3:97 MeOHzDCM) to provide 5-iodo-N-methoxy-N-methyl(tetrahydro-2H-pyranyl)-
1H-indazolecarboxamide (CXIII) as a white Viscous oil (19.1 g, 46 mmol, 92% yield). 1H
NMR (DMSO-ds) 8 ppm 1.28-1.84 (m, 6H), 3.43 (s, 3H), 3.60-4.04 (s, 5H), 5.86-6.08 (m, 1H),
7.45-7.87 (m, 2H), 8.39 (s, 1H), ESIMS found for C15H181N303 m/z 416 (M+H).
Step 4
[0370[ Lithium aluminum hydride (160 mg, 4.21 mmol) was added in portions to
a cooled (0°C) solution of 5-iodo-N-methoxy-N-methyl(tetrahydro-2H-pyranyl)-1H-
indazolecarboxamide (CXIII) (1.46 g, 3.5 mmol) in THF. Stirring was ued at 0°C
until the reaction was completed, approximately 30 min. The on was quenched by the
slow addition ofEtOAc at 0°C, and the whole mixture was poured into 0.4 N aqueous NaHSO4.
The organic layer was washed with brine, dried over MgSO4, concentrated, and purified on a
silica gel column (100% EtOAc —> 3:97 MeOHzDCM) to give (tetrahydro-2H-pyran-
lH-indazolecarbaldehyde (CXIV) as a white solid (0.90 g, 3.15 mmol, 72% yield). 1H
NMR (DMSO-ds) 5 ppm 1.50-1.71 (m, 2H), 1.71-1.87 (m, 1H), 1.97-2.15 (m, 2H), 2.31-2.42
(m, 1H), 3.66-3.99 (m, 2H), 5.96-6.17 (m, 1H), 7.78 (d, J=6 Hz, 1H), 7.84 (d, J=6 Hz, 1H),
8.50 (s, 1H), 10.13 (s, 1H), ESIMS found for C13H131N202 m/z 357 (M+H).
[0371[ Preparation of intermediate 5-bromo(tetrahydro-2H-pyranyl)-1H-
indazolecarboxylic acid (CXVIII) is depicted below in Scheme 25.
COZH step 1 cozH step 2 cone
Br Br
\ HOAc, Brz \ MeOH, H2504 \N
N/ 90°C, 16 h N/ reflux, 4h M
H H H
CX CXV CXVI
p-toluenesulfonic acid, DHP, PPTS
step 5 step 3
THF, 60 0C, 16 h DCM, reflux
COZH COzMe
Br Br
\ NaOH, H20 \
N/N 90°C, 1 h N/
step 4
O O
CXVlII CXVII
Scheme 25
[0372[ A suspension of indazolecarboxylic acid (CX) (1.0 g, 6.16 mmol) in
glacial acetic acid (60 mL) was heated at 120°C to get a clear solution. The solution was cooled
to 90°C. A solution of e (0.633 mL, 12.33 mmol) in l acetic acid (2 mL) was
added slowly to the solution while heating at 90°C. The solution was ’lCl‘ heated 16 h at
90°C. The solution was cooled to room temperature, poured into ice water and further stirred
at room temperature for 15 min. The solids formed were filtered, washed with cold water and
dried under vacuum at room temperature to get 5-bromo-lH-indazole-3 -carboxylic acid (CXV)
as a white solid (1.30 g, 5.39 mmol, 87.5% yield). 1H NMR (DMSO-dg) 5 ppm 13.95 (s, 1H),
13.18 (br s, 1H), 8.21 (d, J: 1.2 Hz, 1H), 7.65 (d, J: 7.0 Hz, 1H), 7.56 (dd, J: 7.0, 1.2 Hz,
1H), ESIMS found for C8H4BrN202 m/z 242.0 (M+H).
Sip—2
[0373[ Concentrated sulfuric acid (1 mL) was added to a suspension of 5-bromo-
1H-indazolecarboxylic acid (CXV) (1.30 g, 5.39 mmol) in dry MeOH (50 mL) and heated
to reflux for 4 h under argon. The solution was cooled to room temperature and the MeOH was
evaporated under vacuum. The residue was dissolved in EtOAc and washed with water. The
organic phase was dried over Na2SO4, filtered and concentrated to afford methyl o-1H-
indazolecarboxylate (CXVI) as a white solid (1.35 g, 5.29 mmol, 98% yield). 1H NMR
(DMSO-ds) 8 ppm 14.13 (s, 1H), 8.21 (d, J: 1.6 Hz, 1H), 7.67 (d, J: 7.2 Hz, 1H), 7.59 (dd, J
= 7.2, 1.2 Hz, 1H), 3.92 (s, 3H), ESIMS found for C9H7BrN202 m/z 256.0 (M+H).
[0374[ A suspension of methyl 5-bromo-1H-indazolecarboxylate (CXVI)
(1.35 g, 5.29 mmol), nium p-toluenesulfonate (0.143 g, 0.56 mmol) and 3,4 dihydro-2H-
pyran (1.02 mL, 11.90 mmol) in anhydrous dichloroethane (20 mL) was d 5 h under
argon. The suspension was turned into the clear solution. The solution was cooled and the
excess solvent was evaporated under vacuum. The residue was dissolved in EtOAc and washed
with dilute NaHC03 solution (satd. NaHC03 soln/HzO: 1:9). The organic layer was dried over
Na2SO4, filtered and concentrated. The residue was purified by column chromatography (100%
hexanes —> 5:95 hexanes) to get methyl 5-bromo(tetrahydro-2H-pyranyl)-1H-
indazolecarboxylate (CXVII) as a white solid (1.47 g, 4.34 mmol, 82% yield). 1H NMR
(DMSO-ds) 5 ppm 8.22 (d, J: 1.4 Hz, 1H), 7.89 (d, J: 7.2 Hz, 1H), 7.68 (dd, J: 7.2, 1.6 Hz,
1H), ), 6.02 (dd, J: 8.0, 2.4 Hz, 1H), 3.94 (s, 3H), 3.88 (m, 1H), 3.79 (m, 1H), 2.37-2.31 (m,
1H), 2.05-1.96 (m, 2H), 1.77-1.73 (m, 1H). 1.60-1.58 (m, 2H), ESIMS found for C14H15BrN203
m/z 340.0 (M+H).
Step 4
[0375[ 2 N Aqueous NaOH solution (10 mL) was added to a sion ofmethyl
-bromo(tetrahydro-2H-pyranyl)-1H-indazole-3 -carboxylate (CXVII) (1.30 g, 3.83
mmol) in water (20 mL) and heated at 90°C for 1 h. The solution was cooled to room
temperature, diluted with ice water and acidified to pH 3.0 with 10% aqueous HCl. The solids
formed were filtered, washed with cold water and dried under vacuum at room temperature to
get 5-bromo(tetrahydro-2H-pyranyl)-1H-indazole-3 -carboxylic acid I) as a white
solid (0.87 g, 2.68 mmol, 70% yield). ESIMS found for C13H13BrN203 m/z 326.0 (M+H).
[0376[ To a on of 5-bromo-1H-indazolecarboxylic acid (CXV) (59.8 g,
248 mmol) in THF (800 mL) under argon was added 3,4 dihydro-2H-pyran (50.6 mL, 558
mmol) and p-TsOH (4.72 g, 24.8 mmol). The reaction was heated to reflux at 60°C for 16 h.
An additional portion ofp-TsOH (0.025 eq) and 3,4 dihydro-2H—pyran (0.56 eq) was added and
the reflux continued for 5 h. The solution was concentrated under vacuum. EtOAc was added
to the residue and the suspension was filtered and dried under high vacuum overnight to e
-bromo(tetrahydro-2H-pyranyl)-1H-indazole-3 -carboxylic acid (CXVIII) as a white
solid (49.07 g, 150.9 mmol, 60.8% yield). ESIMS found for C13H13BrN203 m/z 326.3 (M+H).
[0377 [ Preparation of intermediate 5-bromotrityl-1H-indazole-3 -carboxylic
acid (CXXI) is depicted below in Scheme 26.
cozH step 1 COzEt
Br Br
\N MeOH, 11st4 \N
N/ , 4h N/
H H
CXV CXIX
Tr-Cl, DMF Tr-Cl DCM’
Step 4 step 2
TEA, rt DIPEA, rt
cozH COzEt
Br Br
\N NaOH, H20 \N
N/ 90°C, 1 h N/
\ \
Tr step 3 Tr
CXXI CXX
Scheme 26
S£p_1
[0378[ Preparation of intermediate ethyl 5-bromo-1H-indazolecarboxylate
(CXIX) was performed following the procedure listed in Scheme 25, Step 2. White solid. (3.60
g, 13.38 mmol, 64.5% . 1H NMR (DMSO-ds) 5 ppm 1.37 (t, J=7Hz, 3H), 4.40 (q, J=7Hz,
2H), 7.57 (dd, J=9Hz, J=2Hz, 1H), 7.66 (d, J=9Hz, 1H), 8.20 (d, J=2Hz, 1H), 14.11 (brs, 1H);
ESIMS found for C10H9BrN202 m/z 269.0 (M+H).
Sip—2
[0379[ To a solution of ethyl 5-bromo-1H-indazolecarboxylate (CXIX) and
trityl chloride in DCM was slowly added DIPEA. The solution was d at room temperature
overnight. The reaction was poured into water and stirred for 5 min. The organic layer was
separated, dried over MgSO4 and concentrated under vacuum. The residue was purified by
column tography using a ISCO 200RF system with a SiO2 column (12 g) (100%
hexanes —> 10:90 EtOAczhexanes) to produce a white solid. (357 mg, 0.70 mmol, 69.8% yield).
1H NMR (DMSO-ds) 5 ppm 1.34 (t, J=7Hz, 3H), 4.38 (q, J=7Hz, 2H), 6.43 (d, J=9.5Hz, 1H),
7.11-7.14 (m, 6H), 7.31-7.35 (m, 10H), 8.23 (d, J=2Hz, 1H); ESIMS found for C29H23BrN202
m/z 511.0 (M+H).
Ste 3
[0380[ Preparation Of intermediate 5 -bromotrityl-1H-indazole'3 -carboxy 110
acid (CXXI) by hydrolysis of ethyl 5-bromotrityl-1H-indazolecarboxylate (CXX) can be
performed following the procedure listed in Scheme 25, Step 3.
Step 4
[0381[ Preparation of intermediate otrityl-1H-indazolecarboxylic
acid (CXXI) by tritylation of 5-bromo-1H-indazole-3 -carboxylic acid (CXV) can be performed
following the procedure listed in the l ofMedicinal Chemistry (2003), 46(25), 5458-
5470.
Example 1
[0382[ Preparation of 5-(5-(3,3-dimethylureido)pyridinyl)-N-(pyridinyl)-
1H-indazolecarboxamide (1) is depicted below in Scheme 27.
O O 0
cm :B_B< E CHO
\ /N\ /
I N
o o >2\ \
\ 0/3 \ XXIIN \
N —> N —> N
N/ KOAc, Pd<:1,(dppf)2 NI K3P04, Pd(PPh3)4 N/
DMF, 90°C, 2 h H20, 90°C, 3 h
o o o
CXIV cxxn cxxm
AgNOs, NaOH, Hz
Dionne, rt
overnight
TFA, DCM, \
EtSSiI-I, rt, 3 h N’N
DMF, rt, overnight
1 CXXVI ob CXXIV 05
Scheme 27
SEN—4
[0383[ A solution of 5-iodo(tetrahydro-2H-pyranyl)-1H-indazole
carbaldehyde (CXIV) (1.780 g, 5.0 mmol), bis(pinacolato)diboron (1.523 g, 6.0 mmol), KOAc
(1.471 g, 15 mmol) and dry DMF (20 mL) was purged with argon. PdClz(dppf)2 (0.245 g, 0.3
mmol) was added to the reaction and purged again with argon. The solution was heated at 90°C
for 2 h. Once TLC showed the disappearance of , the solution was cooled to room
temperature. To this solution was added K3PO4 (1.592 g, 7.5 mmol), 3-(5 -bromopyridinyl)-
1,1-dimethylurea (XXII) (1.220 g, 5.0 mmol), Pd(PPh3)4 (173 mg, 0.15 mmol) and water (2
mL). The solution was purged with argon and heated at 90°C for 3 h. The solution was cooled
to room temperature and then concentrated under reduced pressure. The residue was dissolved
in DCM and washed with water, dried over MgSO4, d and then evaporated under vacuum.
The residue was d on a silica gel column (100% DCM —> 2:98 MeOHzDCM) to give 3-
(5 -(3 -formyl(tetrahydro-2H-pyranyl)-1H-indazol-5 -yl)pyridin-3 -yl)-1, 1-dimethylurea
(CXXIII) as a brown s oil which solidified under vacuum at room temperature (354 mg,
0.90 mmol, 18% yield for 2 steps). 1H NMR (DMSO-dg) 5 ppm 10.22 (s, 1H), 8.76 (d, J: 1.6
Hz, 1H), 8.63 (s, 1H), 8.52 (d, J: 1.6 Hz, 1H), 8.36 (s, 1H), 8.24 (m, 1H), 8.05 (d, J: 7.2 Hz,
1H), 7.91 (dd, J: 7.2, 1.4 Hz, 1H), 6.13 (dd, J: 7.6, 2.0 Hz, 1H), 3.93 (m, 1H), 3.85 (m, 1H),
2.98 (s, 6H), 2.47-2.42 (m, 1H), 2.11-2.06 (m, 2H), 1.82-1.79 (m, 1H) 1.64 (m, 2H), ESIMS
found for N503 m/z 394.0(M+H).
[0384[ A solution of sodium ide (0.173 g, 4.33 mmol) in water (5 mL) was
added to a solution of silver nitrate (0.367 g, 2.16 mmol) in water (5 mL) to give a brown
precipitate. 3 -(5 -(3 -formyl(tetrahydro-2H-pyranyl)-1H-indazol-5 -yl) pyridin-3 -yl)-1, 1-
dimethylurea (CXXIII) (0.340 g, 0.86 mmol) was dissolved in 1,4-dioxane (10 mL) and added
to the reaction which was stirred overnight at room temperature. The solution was diluted with
water and then extracted with diethyl ether. The aqueous layer was separated and carefully
brought to pH = 3 with aqueous HCl. The aqueous layer was then extracted with 10%
iPrOH/chloroform. The combined organic layers were then dried (Na2SO4), filtered and
concentrated to give 5-(5 -(3,3-dimethylureido)pyridin-3 -yl)(tetrahydro-2H-pyranyl)-1H-
indazolecarboxylic acid (CXXIV) as a brownish white solid (246 mg, 0.60 mmol, 70%
yield). 1H NMR (DMSO-ds) 8 ppm 13.26 (br. s, 1H), 8.87 (s, 1H), 8.63 (s, 1H), 8.41 (s, 1H),
8.34 (s, 1H), 8.03 (d, J: 7.1 Hz, 1H), 7.86 (dd, J: 7.2, 1.3 Hz, 1H), 6.06 (dd, J: 8.0, 4.0 Hz,
1H), 3.92 (m, 1H), 3.80 (m, 1H), 2.98 (s, 6H), 2.42-2.39 (m, 1H), 2.03-2.02 (m, 2H), 1.79-1.77
(m, 1H) 1.61 (m, 2H), ESIMS found for C21H23N504 m/z M+H).
Step4
[0385[ HATU (0.190 g, 0.5 mmol) was added to a on of 5-(5-(3,3-
dimethylureido)pyridin-3 -yl)(tetrahydro-2H-pyranyl)-1H-indazole-3 xylic acid
) (0.39 g, 1.21 mmol) and diisopropylethylamine (0.174 mL, 1.0 mmol) in DMF stirred
at room temperature under argon. After ng 5 min, the solution was added with 3-
aminopyridine (CXXV) (0.047 g, 0.5 mmol). The solution was stirred overnight at room
temperature under argon. The DMF was removed under reduced pressure, and the residue was
treated with water, sonicated briefly and filtered. The solids were washed with cold water and
dried at room temperature. The product was purified by column chromatography using a 4 g
Thomson normal phase silica gel cartridge (100% DCM —> 5:95 MeOHzDCM) to afford 5-(5-
(3 , 3 -dimethylureido)pyridin-3 -yl)-N-(pyridin-3 -yl)(tetrahydro-2H-pyranyl)-1H-
indazolecarboxamide (CXXVI) as an off white solid (323 mg, 0.67 mmol, 55% yield). 1H
NMR (DMSO-ds) 5 ppm 10.56 (s, 1H), 9.06 (d, J: 2.0 Hz, 1H), 8.75 (d, J: 1.6 Hz, 1H), 8.64
(s, 1H), 8.53 (d,J= 1.6 Hz, 1H), 8.46 (s, 1H), 8.34-8.29 (m, 2H), 8.26 (m, 1H), 8.03 (d, J: 7.0
Hz, 1H), 7.88 (dd, J: 7.0, 1.2 Hz, 1H), 7.43 (dd, J: 6.64, 3.84 Hz, 1H), 6.07 (dd, J: 8.0, 1.8
Hz, 1H), 3.98 (m, 1H), 3.82 (m, 1H), 2.98 (s, 6H), 2.63-2.60 (m, 1H), 2.11-2.06 (m, 2H), 1.83-
1.81 (m, 1H) 1.52 (m, 2H), ESIMS found for C21H23N504 m/z M+H).
[0386[ TFA (5 mL) was added to a on of 5-(5-(3,3-dimethylureido)pyridinyl)-N-(pyridin-3 -yl)(tetrahydro-2H-pyranyl)-1H-indazole-3 -carboxamide (CXXVI)
(0.134 g, 0.27 mmol) and triethylsilane (0.110 mL, 0.69 mmol) in DCM (5 mL) and stirred 3 h
at room temperature. The solvent was removed under vacuum. The residue was treated with
water, sonicated briefly to disperse the solids, basified to pH 9.0 with 5 N NH4OH and sonicated
again. The solids were filtered, washed with cold water and purified by column chromatography
(100% DCM —> 5:95 MeOH[7N NH3]:DCM) to afford 3,3-dimethylureido)pyridinyl)-
N—(pyridinyl)-1H-indazolecarboxamide (1) as a white solid (35.8 mg, 0.09 mmol, 33%
yield). 1H NMR (DMSO-ds) 5 ppm 13.99 (s, 1H), 10.69 (s, 1H), 9.08 (d, J: 1.2 Hz, 1H), 8.74
(d,J= 1.8 Hz, 1H), 8.63 (s, 1H), 8.51 (d, J: 1.5 Hz, 1H), 8.47 (s, 1H), 8.33-8.30 (m, 2H), 8.26
(m, 1H), 7.80 (s, 2H), 7.41 (dd, J: 6.6, 3.6 Hz, 1H), 2.98 (s, 6H), ESIMS found for C21H19N702
m/z 402.3(M+H).
[0387[ The ing compound was prepared in accordance with the procedure
described in the above Example 1.
[0388[ N—(5 -Fluoropyridin-3 -yl)-5 -(pyridin-3 -yl)-1H-indazole-3 -carboxamide
[0389[ Light tan solid. 1H NMR dg) 5 ppm 7.53 (dd, J=8Hz, J=5Hz, 1H),
7.82-7.86 (m, 2H), 8.13-8.15 (m, 1H), .34 (m, 2H), 8.47-8.48 (m, 1H), 8.60 (dd, J=5Hz,
J=2Hz, 1H), 894 (d, J=2Hz, 1H), 8.99 (d, J=2Hz, 1H), 10.97 (s, 1H), 14.05 (s, 1H), ESIMS
found for C13H12FN50 m/z 334 (M+1).
Example 2
[0390[ Preparation of 5-(5-fluoropyridinyl)-N-(6-(trifluoromethyl)pyridin
yl)-1H-indazolecarboxamide (2) is depicted below in Scheme 28.
CF: CF,
/ \N / \N
CXXVII CXXIX ?” F
/ /
0 F \ B\ o
NH 0H
cozfl / \
Hz" cF,
Br Br \U N
t~ —-—N
\ \
HATU, DIPEA KOAc, PdClz(dppf)1
N N/ N,"
DMF, rt, overnight DMF, 90"C, 2 h
o o o
cxvrn cxxvrn cxxx
TFA, DCM,
, rt, 3 h
Scheme 28
[0391[ HATU (1.125 g, 2.96 mmol) was added to a solution of 5-bromo
(tetrahydro-2H-pyranyl)-1H-indazole-3 xylic acid (CXVIII) (0.876 g, 2.69 mmol) and
diisopropylethylamine (1.03 mL, 5.92 mmol) in DMF stirred at room temperature under argon.
After stirring 5 min, the solution was added with 5-aminotrifluoromethyl pyridine
(CXXVII) (0.479 g, 2.96 mmol). The solution was stirred 24 h at room temperature under
argon. The DMF was removed under reduced pressure, and the residue was treated with water,
ted briefly and filtered. The solids were washed with cold water and dried at room
temperature. The product was purified by silica gel column chromatography (100% hexanes —>
7:93 hexanes) to afford 5-bromo(tetrahydro-2H-pyranyl)-N-(6-
(trifluoromethyl)pyridinyl)-1H-indazolecarboxamide II) as a white solid (1.17
g, 2.50 mmol, 93% yield). 1H NMR (DMSO-ds) 5 ppm 10.93 (s, 1H), 9.23 (d, J: 1.9 Hz, 1H),
8.60 (dd, J: 6.8,1.4 Hz, 1H), 8.38 (d, J: 4.4 Hz, 1H), 7.95 (m, 2H), 7.70 (dd, J: 7.1,1.5 Hz,
1H), ), 6.04 (dd, J: 8.1, 1.9 Hz, 1H), 3.98 (m, 1H), 3.82 (m, 1H), 2.59-2.54 (m, 1H), 2.08-2.03
(m, 2H), 1.81-1.77 (m, 1H). 1.66-1.61 (m, 2H), ESIMS found for C19H16BrF3N402 m/z 470.0
(M+H).
S£p_2
[0392[ A solution of 5-bromo(tetrahydro-2H-pyranyl)-N-(6-
(trifluoromethyl) pyridinyl)-1H-indazolecarboxamide (CXXVIII) (0.469 g, 1 mmol), 5-
fluoro-pyridylboronic acid (CXXIX) (0.156 g, 1.1 mmol), potassium phosphate tribasic
(0.318 g, 1.5 mmol) and water (degassed, 1 mL) in DMF (10 mL) was purged with argon.
Tetrakis(triphenylphosphine)palladium(0) (0.034 g, 0.03 mmol) was added and the solution
was purged again with argon. The reaction was heated to 90°C for 3 h when TLC showed
disappearance of starting material. The solution was cooled to room temperature and excess
solvent was removed under . The residue was treated with water, sonicated briefly and
the solids formed were filtered. The solids were washed with cold water and dried under
vacuum at room temperature which was purified by silica gel column chromatography (2:8
EtOAczhexanes —> 3:7 EtOAczhexanes) to afford uoropyridinyl)(tetrahydro-2H-
pyranyl)-N-(6-(trifluoromethyl) nyl)-1H-indazolecarboxamide (CXXX) as a
white solid (427 mg, 0.88 mmol, 88% . 1H NMR (DMSO-dg) 5 ppm 10.95 (s, 1H), 9.25
(d, J: 1.8 Hz, 1H), 8.85 (m, 1H), 8.63 (d, J: 1.8 Hz, 1H), 8.61 (d, J: 2.1 Hz, 1H), 8.53 (m,
1H), 8.16-8.13 (m, 1H), 8.08 (d, J: 7.1 Hz, 1H), 7.97-7.94 (m, 2H), 6.11 (dd, J: 8.1, 1.8 Hz,
1H), 4.01 (m, 1H), 3.88-3.83 (m, 1H), 2.63-2.60 (m, 1H), 2.11-2.07 (m, 2H), 1.83-1.80 (m, 1H).
.65 (m, 2H), ESIMS found for C24H19F4N502 m/z 486.0 (M+H).
S£p_3
[0393[ TFA (10 mL) was added to a solution of 5-(5-fluoropyridinyl)
(tetrahydro-2H-pyranyl)-N-(6-(trifluoromethyl)pyridin-3 -yl)-1H-indazole-3 -carboxamide
(CXXX) (0.420 g, 0.86 mmol) and triethylsilane (0.345 mL, 2.16 mmol) in DCM ( 10 mL) and
stirred 5 h at room temperature. The solvent was removed under vacuum. The residue was
treated with water, sonicated briefly to disperse the solids, basified to pH 9.0 with 5 N NH4OH
and sonicated again. The solids were filtered, washed with cold water and air dried at room
temperature. The solids were suspended in DCMzMeOH (1:1) mixture and boiled to get a clear
solution. The solution was cooled to room temperature. The solids formed were ed
washed with DCM and dried under vacuum at room temperature to get 5-(5-fluoropyridin
yl)-N-(6-(trifluoromethyl)pyridinyl)-1H-indazolecarboxamide (2) as a white solid (72.9
mg, 0.18 mmol, 21% yield). 1H NMR (DMSO-dg) 5 ppm 14.13 (br. s, 1H), 11.11 (s, 1H), 9.27
(d, J: 1.8 Hz, 1H), 8.84 (m, 1H), 8.63 (dd, J: 6.8, 1.8 Hz, 1H), 8.60 (d, J: 2.0 Hz, 1H), 8.53
(m, 1H), 8.14-8.11 (m, 1H), 7.94 (d, J: 6.9 Hz, 1H), .83 (m, 2H), ESIMS found for
C19H11F4N50 m/z 402.30 (M+H).
[0394[ The following compound was prepared in accordance with the procedure
described in the above Example 2.
WO 75858
[0395[ 5-(Py1idinyl)-N-(6-(t1ifluoromethyl)pyridinyl)-1H-indazole
carboxamide 3.
[0396[ White solid (19% yield). 1H NMR (DMSO-dg) 5 ppm 14.03 (br. s, 1H),
11.10 (s, 1H), 9.27 (d, J: 1.8 Hz, 1H), 8.94 (d, J: 1.6 Hz, 1H), 8.63 (dd, J: 6.8,1.7 Hz, 1H),
8.60 (m, 1H), 8.48 (s, 1H), 8.15-8.13 (m, 1H), 7.93 (d, J: 6.9 Hz, 1H), 7.85 (s, 2H), 7.54 (m,
1H), ESIMS found for C19H12F3N50 m/z 384.0 (M+H).
[0397[ N—( 1-Methyl(t1ifluoromethyl)-1H-pyrazolyl)(pyridinyl)-1H-
indazolecarboxamide 37.
[0398[ Light green solid (76.7 mg, 0.20 mmol, 48.4% yield). 1H NMR (DMSO-
d6) 5 ppm 3.93 (s, 3H), 7.18 (s, 1H), 7.55 (dt, J=8Hz, J=3Hz, 1H), 7.81 (dd, J=15Hz, J=9Hz,
2H), 8.16 (d, J=8Hz, 1H), 8.45 (s, 1H), 8.61 (d, J=4Hz, 1H), 8.95 (s, 1H), 10.81 (s, 1H), 13.96
(s, 1H), ESIMS found for C18H13F3N60 m/z 387.1 (M+H).
/ NH
[0399[ 5 -(Py1idin-3 -yl)-N-(pyiidin-3 -ylmethyl)-1H-indazole-3 -carboxamide 42.
[0400[ White solid (54.5 mg, 0.17 mmol, 78% yield). 1H NMR dG) 5 ppm
4.53 (d, J=6Hz, 2H), 7.35 (dd, J=8Hz, J=5Hz, 1H), 7.49-7.52 (m, 1H), 7.74-7.78 (m, 3H), 8.09-
8.11 (m, 1H), 8.41-8.42 (m, 1H), 8.45 (dd, J=5Hz, J=2Hz, 1H), 8.57 (dd, J=5Hz, J=2Hz, 1H),
8.59 (d, J=2Hz, 1H), 8.90 (d, J=2Hz, 1H), 9.16 (t, J=6Hz, 1H), 13.77 (s, 1H), ESIMS found for
C19H15N50 m/Z 330 (M+H).
[0401 [ 5 -(PyIidin-3 -yl)-N-(4-(tiifluoromethyl)pyridin-3 -yl)-1H-indazole-3 -
carboxamide 48.
[0402[ White solid (67 mg, 0.17 mmol, 62% yield). 1H NMR (DMSO-dg) 5 ppm
7.52 (dd, J=8Hz, J=5Hz, 1H), 7.83-7.87 (m, 3H), 8.12 (td, J=8Hz, J=2Hz, 1H), 8.41 (t, J=1Hz,
1H), 8.59 (dd, J=5Hz, J=2Hz, 1H), 8.75 (d, J=5Hz, 1H), 8.92 (d, J=3Hz, 1H), 9.08 (s, 1H),
.21 (s, 1H), 14.06 (hrs, 1H), ESIMS found for C19H12F3N50 m/z 384.0 (M+H).
[0403[ 5-(PyIidinyl)-N-(6-(pyrrolidinyl)pyiidinyl)-1H-indazole
carboxamide 53.
[0404[ Beige solid (23.8 mg, 0.06 mmol, 44.5% yield). 1H NMR (DMSO'dG) 5
ppm 1.92-1.97 (m, 4H), 3.38 (t, J=7Hz, 4H), 6.46 (d, J=9Hz, 1H), 7.52 (dd, J=8Hz, J=5Hz,
1H), 7.80 (dq, J=9Hz, J=2Hz, 2H), 7.97 (dd, J=9Hz, J=3Hz, 1H), 8.12 (dd, J=8Hz, J=4Hz,
1H), 8.47 (s, 1H), 8.50 (d, J=3Hz, 1H), 8.59 (dd, J=5Hz, J=2Hz, 1H), 8.92 (d, J=2Hz, 1H),
.22 (s, 1H), 13.86 (s, 1H), ESIMS found for NGO m/Z 385.1 (M+H).
QN o
NH 54%
[0405[ N-(4-(Cyclopropanecarboxamido)pyiidinyl)(pyIidinyl)-1H-
indazolecarboxamide 58.
[0406[ White solid (32.7 mg, 0.08 mmol, 37.0% yield). 1H NMR (DMSO-ds) 5
ppm 0.84-0.88 (m, 2H), 0.88-0.92 (m, 2H), 1.91-1.99 (m, 1H), 7.52 (dd, J=8Hz, J=5Hz, 1H),
7.73 (d, J=6Hz, 1H), 7.82 (dd, J=12Hz, J=9Hz, 2H), 8.12 (dt, J=9Hz, J=4Hz, 1H), 8.34 (d,
J=6Hz, 1H), 8.44 (s, 1H), 8.59 (dd, J=5Hz, J=2Hz, 1H), 8.80 (s, 1H), 8.92 (d, J=2Hz, 1H),
.03 (s, 1H), 10.31 (s, 1H), 13.98 (s, 1H), ESIMS found for C22H18N602 m/Z 399.0 (M+H).
[0407[ N-(6-(Cyclopentylcarbamoyl)pyiidinyl)(pyIidinyl)-1H-indazole-
3-carboxamide 181.
[0408[ Light yellow solid (18 mg, 0.04 mmol, 16.6% yield). 1H NMR (DMSO-
d6) 5 ppm .64 (m, 4H), 1.67-1.76 (m, 2H), 1.85-1.94 (m, 4H), 4.24 (quin, J=8Hz, 1H),
7.53 (dd, J=8Hz, J=5Hz, 1H), 7.84 (ABq, 2H), 8.03 (d, J=9Hz, 1H), 8.14 (d, J=8Hz, 1H), 8.45
(d, J=8Hz, 1H), 8.48 (s, 1H), 8.54 (dd, J=9Hz, J=2,5Hz, 1H), 8.60 (d, J=4Hz, 1H), 8.94 (d,
J=2Hz, 1H), 9.16 (d, J=2Hz, 1H), 10.97 (s, 1H), 14.08 (brs, 1H), ESIMS found for C24H22N602
m/z 427.1 (M+H).
Example 3
[0409[ Preparation of N,5-di(pyIidin-3 -yl)-1H-indazolecarboxamide (4) is
depicted below in Scheme 29.
CXXXI ?H
CHO UOH / /
I CHO l COZH
I / N N
\ N \ \
\ AgNo,, NaOH, 112
N N \N
N/ KOAc, PdC12(dPPf)2 N/ Dioxane, rt, overnight N/
DMF, 90°C, 2 h
0 0 O
CXIV le CXXXH]
CXXV [I
HATU, Dll’EA
DMF, rt, overnight
/ \N / \N
o o
/ NH / NH
1 1
N\ N\
\N TFA,DCM, \N
1': EthiI-I,rt,3h N/
4 o
cxxxrv
Scheme 29
S£p_1
[0410[ 5 -Iodo(tetrahydro-2H-pyranyl)-1H-indazole-3 -carbaldehyde
(CXIV) (1.53 g, 4.30 mmol), pyridineboronic acid (CXXXI) (0.58 g, 4.73 mmol), and
ium phosphate tribasic (1.37 g, 6.45 mmol) was dissolved in 1,4-dioxane (43.0 mL) and
water (9.0 mL). Tetrakis(triphenylphosphine)palladium(0) (0.50 g, 0.4301 mmol) was added,
and the on was heated to 95°C for 2.5 h. The solvent was removed, and the residue was
partitioned between EtOAc and water. The organic phase was separated and washed
sequentially with water and brine. The material was dried (MgSO4), trated, and purified
by flash chromatography using a 40 g Thomson normal phase silica gel cartridge (100%
hexanes —> 1:1 EtOAczhexanes) to afford 5-(pyridinyl)(tetrahydro-2H-pyranyl)-1H-
indazolecarbaldehyde (CXXXII) (0.62 g, 2.02 mmol, 47% yield) as atan amorphous solid.
1H NMR (DMSO-ds) 5 ppm 10.23 (s, 1H), 8.95 (d, J: 2.3 Hz, 1H), 8.61 (dd, J: 4.8, 1.5 Hz,
1H), 8.39 (d, J: 0.98 Hz, 1H), 8.17-8.14 (m, 1H), 8.06 (d, J: 8.8 Hz, 1H), 7.95-7.93 (m, 1H),
.60 (m, 1H), 6.13 (dd, J: 9.4, 2.4 Hz, 1H), 3.93-3.90 (m, 1H), 3.86-3.81 (m, 1H), 2.45-
2.41 (m, 1H), 2.11-2.07 (m, 2H), 1.82-1.78 (m, 1H), 1.66-1.62 (m, 2H), ESIMS found for
C18H17N302 m/z 308 (M+H).
SE1;2
[0411[ To a on of silver nitrate (0.55 g, 3.25 mmol) in water (10 mL) was
added a solution of sodium hydroxide (0.26 g, 6.50 mmol) in water (5 mL) to give a brown
precipitate. 5 -(pyridin-3 -yl)(tetrahydro-2H-pyranyl)-1H-indazole-3 -carbaldehyde
(CXXXII) (0.40 g, 1.30 mmol) dissolved in 1,4-dioxane (3 mL) was added to the reaction
which was stirred at room temperature for 2 h. The reaction was then extracted with diethyl
ether. The aqueous layer was separated and carefiJlly brought to pH = 3 with 10% aqueous
HCl. The aqueous layer was then extracted five times with iPrOH/chloroform (1/9). The
combined organic layers were then dried (MgSO4) and concentrated to afford 5-(pyridin-3 -yl)-
1-(tetrahydro-2H-pyranyl)-1H-indazolecarboxylic acid (CXXXIII) (0.30 g, 0.93 mmol,
70% yield) as a white solid. 1H NMR (DMSO-dg) 5 ppm 13.28 (br, 1H), 8.93 (s, 1H), 8.60 (d,
J: 4.1 Hz, 1H), 8.32 (d, J = 0.83 Hz, 1H), 8.14-8.12 (m, 1H), 8.00 (d, J: 8.8 Hz, 1H), 7.86
(dd, J: 8.8, 1.7 Hz, 1H), 7.52 (dd, J: 7.8, 4.7 Hz, 1H), 6.04 (dd, J: 9.3, 2.3 Hz, 1H), 3.92-
3.90 (m, 1H), 3.83-3.78 (m, 1H), 2.44-2.37 (m, 1H), 2.08-2.02 (m, 2H), 1.79-1.76 (m, 1H),
.61 (m, 2H).
[0412[ To a solution of idin-3 -yl)(tetrahydro-2H-pyranyl)-1H-
indazolecarboxylic acid (CXXXIII) (0.39 g, 1.21 mmol) and 3-aminopyridine (CXXVII)
(0.11 g, 1.21 mmol) in DMF (4.0 mL) was added N,N-diisopropylethylamine (0.42 mL, 1.21
mmol). The on was cooled to 0°C before adding HATU (0.46 g, 1.21 mmol). The ice bath
was d, and the reaction warmed to room temperature and stirred for 2 h. The DMF was
removed under reduced pressure, and the residue was partitioned n chloroform and
water. The organic phase was separated and washed sequentially with water and brine, dried
over MgSO4, filtered, and concentrated. The product was purified by column chromatography
using a 25 g Thomson normal phase silica gel cartridge (100% CHC13 —> 2:98 MeOHzCHClg)
to afford N,5 -di(pyridin-3 -yl)(tetrahydro-2H-pyranyl)- 1H-indazole-3 -carboxamide
(CXXXIV) (0.36 g, 0.90 mmol, 75% yield) as an off-white solid. 1H NMR (DMSO-ds) 5 ppm
.56 (s, 1H), 9.06 (d, J: 2.4 Hz, 1H), 8.94 (d, J: 2.3 Hz, 1H), 8.60 (dd, J: 4.8, 1.5 Hz, 1H),
8.47 (d, J: 1.1 Hz, 1H), 8.34-8.33 (m, 1H), 8.31-8.29 (m, 1H), 8.16-8.14 (m, 1H), 8.04 (d, J:
8.8 Hz, 1H), 7.90 (dd, J: 8.8, 1.8 Hz, 1H), 7.54-7.52 (m, 1H), 7.43-7.41 (m, 1H), 7.43-7.41
(m, 1H), 6.08-6.06 (m, 1H), 4.01-3.99 (m, 1H), 3.87-3.82 (m, 1H), 2.64-2.57 (m, 1H), 2.11-
2.06 (m, 2H), .80 (m, 1H), 1.69-1.65 (m, 2H), ESIMS found for C23H21N502 m/z 400
(M+H).
Step4
[0413[ TFA (5.0 mL) was added to a solution of N,5-di(pyridinyl)
(tetrahydro-2H-pyranyl)-1H-indazolecarboxamide (CXXXIV) (0.36 g, 0.90 mmol) and
triethylsilane (0.29 mL, 1.81 mmol) in DCM (5.0 mL). The solution was stirred overnight at
room ature. An additional 5.0 mL of TFA was added, and the solution was again d
overnight. The ts were removed, and the residue was treated with 7 N ammonia in
MeOH. The solvents were again removed, and the product was purified by flash
chromatography using a 12 g Thomson normal phase silica gel cartridge (100% CHC13 —> 5:95
MeOH[7N NH3]:CHC13) to afford N,5-di(pyridinyl)-1H-indazolecarboxamide (4) (0.23
g, 0.73 mmol, 82% yield) as a white solid. 1H NMR (DMSO-dg) 5 ppm 14.00 (s, 1H), 10.69 (s,
1H), 9.08 (d, J: 2.0 Hz, 1H), 8.93 (d, J: 2.0 Hz, 1H), 8.60 (dd, J = 4.8, 1.3 Hz, 1H), 8.48-
8.47 (m, 1H), 8.33-8.31 (m, 2H), 8.15-8.12 (m, 1H), .81 (m, 2H), 7.54-7.51 (m, 1H),
7.41-7.39 (m, 1H), ESIMS found for C18H13N50 m/z 316 (M+H).
[0414[ The following compounds were prepared in accordance with the procedure
described in the above Example 3.
[0415[ N—(3 '-Fluorobiphenyl-3 -yl)-5 -(pyridin-3 H-indazole -3 -carboxamide
[0416[ White solid (77 mg, 0.19 mmol, 69% yield). 1H NMR (DMSO'dG) 5 ppm
13.95 (s, 1H), 10.50 (s, 1H), 8.94 (d, J : 2.3 Hz, 1H), 8.59 (dd, J: 4.6, 1.5 Hz, 1H), 8.51 (d, J
= 1.0 Hz, 1H), 8.31-8.30 (m, 1H), 8.15-8.13 (m, 1H), 7.99-7.97 (m, 1H), 7.83-7.82 (m, 2H),
.45 (m, 6H), 7.24-7.22 (m, 1H), ESIMS found for C25H17FN4O m/z 409 (M+H).
[0417 [ 5-(Pyridinyl)-N-(pyridinyl)-1H-indazolecarboxamide 6.
[0418[ Off-white solid (52 mg, 0.16 mmol, 77% yield). 1H NMR dG) 5
ppm 14.05 (br, 1H), 10.83 (s, 1H), 8.94 (d, J: 2.0 Hz, 1H), 8.60 (dd, J = 4.6, 1.2 Hz, 1H),
8.48-8.47 (m, 3H), 8.15-8.13 (m, 1H), 7.94 (dd, J: 5.0, 1.4 Hz, 2H), 7.86-7.82 (m, 2H), 7.54-
7.52 (m, 1H), ESIMS found for C18H13N50 m/z 316 (M+H).
WO 75858
[0419[ N—(5-((Dimethylamino)methyl)py1idinyl)(pyIidinyl)-1H-
indazolecarboxamide 7.
[0420[ Off-white solid (37 mg, 0.10 mmol, 47% . 1H NMR (DMSO-ds) 5
ppm 14.00 (s, 1H), 10.68 (s, 1H), 8.94 (d, J: 2.0 Hz, 1H), 8.91 (d, J: 2.3 Hz, 1H), 8.60 (dd, J
= 4.7, 1.2 Hz, 1H), 8.49-8.48 (m, 1H), 8.38-8.37 (m, 1H), 8.21 (d, J: 2.2 Hz, 1H), 8.16-8.13
(m, 1H), 7.85-7.81 (m, 2H), 7.52 (dd, J: 7.9, 4.9 Hz, 1H), 3.44 (s, 2H), 2.19 (s, 6H), ESIMS
found for C21H20N60 m/z 373 (M+H).
[0421[ 5 -(Py1idin-3 -yl)-N-(6-(pyrrolidinylmethyl)py1idin-3 -yl)-1H-indazole-
3-carboxamide 8.
[0422[ Off-white solid (38 mg, 0.10 mmol, 77% yield). 1H NMR (DMSO-ds) 5
ppm 13.99 (br, 1H), 10.64 (s, 1H), 8.96 (d, J: 2.5 Hz, 1H), 8.93 (d, J: 2.4 Hz, 1H), 8.59 (dd,
J: 4.8, 1.5 Hz,1H), 8.48 (d, J=1.2 Hz,1H), 8.27 (dd, J: 8.5, 2.5 Hz, 1H), 8.16-8.12 (m, 1H),
7.84-7.80 (m, 2H), 7.54-7.51 (m, 1H), 7.41 (d, J: 8.5 Hz, 1H), 2.37 (s, 2H), 2.50-2.47 (m, 4H),
1.72-1.70 (m, 4H); ESIMS found for C23H22N60 m/z 399 (M+H).
[0423[ N-(5-(3-Fluorophenyl)pyridinyl)(py1idinyl)-1H-indazole
carboxamide 9.
[0424[ White solid (35 mg, 0.09 mmol, 47% yield). 1H NMR ds) 5 ppm
14.05 (br s, 1H), 10.79 (s, 1H), 9.13 (d, J: 2.0 Hz, 1H), 8.94 (d,J= 1.9 Hz, 1H), 8.68-8.65 (m,
2H), 8.60 (dd,J= 4.83, 4.83 Hz, 1H), 8.52-8.49 (m, 1H), 8.16-8.12 (m, 1H), 7.85-7.81 (m, 2H),
7.62-7.56 (m, 3H), 7.54-7.50 (m, 1H), 7.31-7.26 (m, 1H). ESIMS found for FN50 m/z
410.5 (M+H).
[0425[ N-(2-(4-Methylpiperazinyl)pyIidin-3 -yl)-5 -(py1idin-3 -yl)-1H-
indazole-3 -carboxamide 1 1.
[0426[ White solid (11 mg, 0.03 mmol, 65% yield). 1H NMR (DMSO-ds) 5 ppm
14.10 (s, 1H), 9.63 (s, 1H), 8.93 (d, J: 2.1 Hz, 1H), 8.65-8.59 (m, 2H), 8.48 (s, 1H), 8.16-8.12
(m, 1H), .09 (m, 1H), 7.87-7.80 (m, 2H), 7.55-7.51 (m, 1H), 7.20-7.17 (m, 1H), 3.10-
3.06 (m, 4H), 2.80-2.40 (m, 4H), 2.30 (s, 3H). ESIMS found for C23H23N7O m/z 414.0 (M+H).
/ \N
[0427[ N—(6-(4-Methylpiperazin- 1-yl)py1idinyl)(py1idinyl)-1H-
indazolecarboxamide 12.
[0428[ White solid (31 mg, 0.07 mmol, 39% yield). 1H NMR (DMSO-ds) 5 ppm
13.86 (br s, 1H), 10.33 (s, 1H), 8.92 (d, J: 2.1 Hz, 1H), .58 (m, 2H), 8.46 (s, 1H), 8.14-
8.11 (m, 1H), 8.10-8.02 (m, 1H), 7.83-7.78 (m, 2H), 7.54-7.50 (m, 1H), 6.86 (d, J: 9.1 Hz,
1H), 3.45-3.42 (m, 4H), 2.42-2.39 (m, 4H), 2.21 (s, 3H). ESIMS found for C23H23N7O m/z 414.3
(M+H).
[0429[ N—(Pyridazinyl)-5 -(py1idin-3 -yl)- lH-indazole-3 xamide 14.
[0430[ Off-white solid (50 mg, 0.16 mmol, 99% yield). 1H NMR (DMSO-ds) 5
ppm 14.20-13.90 (br, 1H), 11.15 (s, 1H), 9.71-9.70 (m, 1H), 9.09-9.08 (m, 1H), 8.94 (d, J: 2.0
Hz, 1H), 8.61-8.60 (m, 1H), 8.47-8.46 (m, 1H), 8.25 (dd, J: 5.9, 2.8 Hz, 1H), .13 (m,
1H), 7.86-7.85 (m, 2H), 7.53 (dd, J: 7.8, 5.0 Hz, 1H), ESIMS found for C17H12N60 m/z 317
(M+H).
[0431 [ N-(6-((4-Methylpiperazin- l -yl)methyl)py1idin-3 -yl)(py1idin-3 -yl) - lH-
indazolecarboxamide 15.
[0432[ White solid (42 mg, 0.10 mmol, 81% yield). 1H NMR (DMSO-ds) 5 ppm
13.97 (br, 1H), 10.65 (s, 1H), 8.97 (d, J: 2.4 Hz, 1H), 8.93 (d, J: 2.1 Hz, 1H), 8.59 (dd, J:
4.7, 1.5 Hz, 1H), 8.48-8.47 (m, 1H), 8.28 (dd, J: 8.5, 2.5 Hz, 1H), 8.15-8.12 (m, 1H), 7.85-
7.81 (m, 2H), 7.54-7.51 (m, 1H), 7.40 (d, J: 8.5 Hz, 1H), 3.55 (s, 2H), 2.42-2.28 (m, 8H),2.15
(s, 3), ESIMS found for C24H25N7O m/z 428 (M+H).
Example 4
[0433[ Preparation of 5 -(5 py1idin-3 -yl)-N-(py1idin-3 -yl) - lH-indazole-3 -
carboxamide (13) is depicted below in Scheme 30.
CXXIX
/ ?”
o F \ B\ 0H
cozH NH
H N / \ |
Br 2 Br N/
\N ——N- \N —,
N/ HATU, DIPEA N/ KOAc, dppf)2
H DMF, 0°C-rt, 2 h H DMF, MW, 180°C, 1 h
CXV cxxxv
Scheme 30
S£p_1
[0434[ To a stirring solution of 3-aminopyridine (CXXV) (0.195 g, 0.2.07 mmol)
in DMF (10 mL) was added 5-bromo-1H—indazolecarboxylic acid (CXV) (0.500 g, 0.2.07
mmol) and N,N—diisopropylethylamine (0.723 mL, 4.15 mmol). The reaction e was
cooled to 0°C and added with HATU (0.787 g, 2.07 mmol). The reaction mixture was allowed
to warm to room temperature and stirred for an additional 2 h. The solution was concentrated
under vacuum. The residue was purified by column tography (1:99 MeOH[7N
NH3]:CHC13 —> 4:96 MeOH[7N NH3]:CHCl3) to afford 5-bromo-N-(pyridinyl)-1H-
indazolecarboxamide ) (0.200 g, 0.63 mmol, 30% yield) as a white solid. ESIMS
found for C13H9BrN4O m/z 318.0 (M+H).
Sip—2
[0435[ To a microwave vial was added 5-bromo-N-(pyridin-3 -yl)-1H-indazole
carboxamide (CXXXV) (0.200 g, 0.63 mmol), 5-fluoropyridineboronic acid (CXXIX)
(0.098 g, 0.694 mmol), tetrakis(triphenylphosphine)palladium(0) (0.036 g, 0.032 mmol),
potassium phosphate (0.201 g, 0.947 mmol), water (1 mL), and DMF (5 mL). The reaction vial
was capped, purged with argon and heated under microwave irradiation for 1 h at 180°C. The
solution was filtered through a pad of Celite and concentrated under vacuum. The crude product
was purified by column tography (100% CHC13 —> 2:98 N NH3]: CHCl3) to
afford 5-(5-fluoropyridinyl)-N-(pyridinyl)-1H-indazolecarboxamide (13) (4 mg, 0.01
mmol, 2% yield) as a white solid. 1H NMR (DMSO-dg) 5 ppm 14.02 (br s, 1H), 10.70 (s, 1H),
9.08 (d, J: 2.5 Hz, 1H), 8.83 (t, J: 1.8 Hz, 1H), 8.60 (d, J: 2.7 Hz, 1H), 8.53-8.52 (m, 1H),
8.34-8.29 (m, 2H), 8.14-8.09 (m, 1H), 7.89-7.81 (m, 2H), 7.42-7.38 (m, 1H). ESIMS found for
ClngzFNso m/z 334.0 (M+H).
Example 5
[0436[ Preparation of N-(pyridin-3 -yl)-5 -(5 -(trifluoromethyl)pyridin-3 -yl)-1H-
indazolecarboxamide (16) is depicted below in Scheme 31.
CXXVII
c0211 NH
H N / \
2 :3“—
Br Br
\N N 39039°
u’ HATED“? N’ KOAc, PdC12(dPP02
DMF, rt, overnight
DMF, 900C 2 h
o o
cxvrn cxxxv cxxxvr0
cxxxvn
F30 Br
K3P04, Pd(PPh3)4
H20, 90°C, 3 h
TFA, DCM,
EtSSiH, rt, 3 n
Scheme 31
[0437[ Preparation of intermediate 5-bromo-N-(pyridinyl)(tetrahydro-2H-
pyranyl)-1H-indazolecarboxamide (CXXXV) was med following the ure
listed in Scheme 19, Step 4. Light yellow solid (5.5 g, 13.7 mmol, 88% yield). ESIMS found
for C18H17BrN402 m/Z 401.1 (M793‘+H) and 403.1 (M813‘+H).
[0438[ Preparation of intermediate N—(pyridinyl)(tetrahydro-2H-pyran
yl)(5-(trifluoromethyl)pyridinyl)-1H-indazolecarboxamide (CXXXVIII) was
performed following the procedure listed in Scheme 26, Steps 1-2. Tan solid (295 mg, 0.63
mmol, 84% yield). ESIMS found for C24H20F3N502 m/z 468.1 (M+H).
S£p_4
[0439[ Preparation of N-(pyridinyl)(5-(trifluoromethyl)pyridinyl)-1H-
lecarboxamide (16) was performed following the procedure listed in Scheme 28, Step
4. White solid (95 mg, 0.25 mmol, 39.3% . 1H NMR (DMSO-dg) 5 ppm 7.40 (dd,
J=2.2Hz, J=2Hz, 1H), 7.84 (d, J=6.7Hz, 1H), 7.93 (dd, J=1.5Hz, J=7Hz, 1H), 8.29-8.34 (m,
2H), 8.50 (s, 1H), 8.57 (s, 1H), 8.99 (s, 1H), 9.09 (d, J=2Hz, 1H), 9.25 (d, J=1.6Hz, 1H), 10.72
(brs, 1H), ESIMS found for C19H12F3N50 m/z 383.9 (M+H).
[0440[ The following compounds were prepared in accordance with the procedure
described in the above Example 5.
[0441 [ 5 -(5 -((Dimethylamino)methyl)pyridin-3 -yl)-N-(6-(trifluoromethyl)
pyridin-3 -yl)- lH-indazole-3 -carboxamide 26.
[0442[ White solid (93 mg, 0.21 mmol, 78% yield). 1H NMR (DMSO-ds) 5 ppm
2.24 (s, 6H), 3.57 (s, 2H), 7.86 (Abq, J=8Hz, 2H), 7.93 (d, J=9Hz, 1H), 8.04 (brs, 1H), 8.50 (d,
J=7Hz, 1H), 8.63 (dd, J=9Hz, J=2Hz, 1H), 8.85 (d, J=2Hz, 1H), 9.27 (d, J=2Hz, lH), 11.11 (s,
1H), 14. 11 (s, 1H), ESIMS found for C22H19F3N60 m/z 441.0 (M+H)
[0443[ N—(5 -(3 din-3 -ylcarbamoyl)- azol-S -yl)pyridin-3 -yl)
morpholinecarboxamide 32.
[0444[ White solid (132 mg, 0.30 mmol, 56% yield). 1H NMR (DMSO-ds) 5 ppm
3.49 (t, J=5Hz, 4H), 3.64 (t, J=5Hz, 4H), 7.40 (dd, J=8Hz, J=5Hz, 1H), 7.82 (d, J=le, 1H),
8.26 (t, J=2Hz, 1H), 8.30-8.34 (m, 2H), 8.47 (s, 1H), 8.54 (d, J=2Hz, 1H), 8.72 (d, J=2Hz, 1H),
8.87 (s, 1H), 9.09 (d, 2H2, 1H), 10.71 (s, 1H), 14.01 (s, 1H), ESIMS found for C23H21N703 m/Z
444.3 (M+H).
[0445[ 5 -(5 -((Dimethylamino)methyl)py1idin-3 -yl)-N-(6-(2-fluorophenoxy)
pyIidinyl)-1H-indazolecarboxamide 36.
[0446[ White solid (137 mg, 0.28 mmol, 53% yield). 1H NMR (DMSO-ds) 5 ppm
2.20 (s, 6H), 3.53 (s, 2H), 7.16 (d, J=9Hz, 1H), 7.22-7.40 (m, 4H), 7.82 (d/Abq, J=9Hz, J=1Hz,
2H), 8.00 (t, J=2Hz, 1H), 8.38 (dd, J=9Hz, J=3Hz, 1H), 8.47 (s, 1H), 8.49 (d, J=2Hz, 1H), 8.55
(d, J=3Hz, 1H), 8.83 (d, J=2Hz, 1H), 10.67 (s, 1H), 13.97 (brs, 1H), ESIMS found for
C27H23FN602 m/z 383.1 (M+H).
[0447[ 5-(5-(Cyclopropanecarboxamido)pyIidinyl)-N-(6-(4-methylpiperazin-
1-yl)py1idin-3 -yl)-1H-indazole-3 xamide 38.
[0448[ White solid (39 mg, 0.08 mmol, 61% yield). 1H NMR (DMSO-dg) 5 ppm
0.83-0.90 (m, 4H), 1.80-1.86 (m, 1H), 2.25 (brs, 3H), 2.45 (brs, 4H), 3.45 (brs, 4H), 6.86 (d,
J=9Hz, 1H), 7.79 (d, J=1Hz, 1H), 8.04 (dd, J=9Hz, J=3Hz, 1H), 8.42 (t, J=2Hz, 1H), 8.46 (s,
1H), 8.60 (dd, J=10Hz, J=3Hz, 2H), 8.76 (d, J=2Hz, 1H), 10.34 (s, 1H), 10.56 (s, 1H), 13.90
(s, 1H), ESIMS found for C27H27N802 m/z 497.4 (M+H).
[0449[ 5 -(5 -(Cyclopropanecarboxamido)py1idin-3 -yl)-N-(6-(trifluoromethyl)
pyIidinyl)-1H-indazolecarboxamide 39.
[0450[ White solid (128 mg, 0.27 mmol, 45% yield). 1H NMR (DMSO-ds) 5 ppm
0.82-0.90 (m, 4H), 1.80-1.86 (m, 1H), 7.84 (s, 2H0, 7.92 (d, J=9Hz, 1H), 8.43 (d, J=2Hz, 1H),
8.48 (s, 1H), 8.61-8.65 (m, 2H), 8.77 (d, J=2Hz, 1H), 9.27 (d, J=2Hz, 1H), 10.57 (s, 1H), 11.11
(s, 1H), 14.11 (s, 1H), ESIMS found for C23H17F3N602 m/z 467.1 (M+H).
[0451 [ 5 -(5 -((Dimethylamino)methyl)py1idin-3 -yl)-N-(pyIidin-3 -yl)-1H-
indazolecarboxamide 40.
[0452[ White solid (312 mg, 0.84 mmol, 77% yield). 1H NMR (DMSO-ds) 5 ppm
2.21 (s, 6H), 3.53 (s, 2H), 7.40 (dd, J=8Hz, J=5Hz, 1H), 7.83 (d/Abq, J=9Hz, J=2Hz, 2H), 8.01
(t, J=2Hz, 1H), 8.29-8.34 (m, 2H), 8.48 (dd, J=4Hz, J=1Hz, 1H), 8.83 (d, J=2Hz, 1H), 9.08 (d,
J=3Hz, 1H), 10.70 (s, 1H), 13.99 (brs, 1H), ESIMS found for C21H20N60 m/Z 373.0 (M+H).
[0453[ 5-(5-(Cyclopropanecarboxamido)py1idinyl)-N-(py1idinyl)-1H-
indazolecarboxamide 41.
[0454[ White solid (148 mg, 0.37 mmol, 71% . 1H NMR (DMSO-ds) 5 ppm
0.83-0.90 (m, 4H), 1.80-1.87 (m, 1H), 7.40 (dd, J=8Hz, J=5Hz, 1H), 7.82 (d, J=1Hz, 1H), 8.29-
8.34 (m, 2H), 8.43 (t, J=2Hz, 1H), 8.47 (s, 1H), 8.62 (d, J=2Hz, 1H), 8.76 (d, J=2Hz, 1H), 9.08
(d, J=2Hz, 1H), 10.57 (s, 1H), 10.70 (s, 1H), 14.01 (s, 1H), ESIMS found for C22H18N602 m/z
399.0 (M+H).
[0455[ N—(Pyridin-3 -yl)-5 -(5 -(pyrrolidinylmethyl)py1idin-3 -yl)-1H-indazole-
oxamide 43.
[0456[ White solid (157 mg, 0.39 mmol, 76% yield). 1H NMR (DMSO-ds) 5 ppm
1.70-1.74 (m, 4H), 2.46-2.52 (m, 4H), 3.71 (s, 2H), 7.40 (dd, J=8Hz, J=5Hz, 1H), 7.83 (d/Abq,
J=9Hz, J=2Hz, 2H), 8.02 (t, J=2Hz, 1H), 8.29-8.34 (m, 2H), 8.48 (s, 1H), 8.51 (d, J=2Hz, 1H),
8.82 (d, J=2Hz, 1H), 9.08 (d, J=2Hz, 1H), 10.70 (s, 1H), 14.00 (s, 1H), ESIMS found for
N60 m/Z 399.0 (M+H).
[0457[ N—(6-Ethoxypy1idin-3 -yl)-5 -(5 -(pyrrolidinylmethyl)py1idin-3 -yl)-1H-
lecarboxamide 44.
[0458[ White solid (62 mg, 0.14 mmol, 39% yield). 1H NMR (DMSO-ds) 5 ppm
1.32 (t, J=7Hz, 3H), 1.70-1.74 (m, 4H), 2.47-2.52 (m, 4H), 3.71 (s, 2H), 4.29 (q, J=7Hz, 2H),
6.81 (d, J=9Hz, 1H), 7.82 (d/Abq, J=9Hz, J=2Hz, 2H), 8.01 (t, J=2Hz, 1H), 8.16 (dd, J=9Hz,
J=3Hz, 1H), 8.46 (s, 1H), 8.51 (d,J=2Hz, 1H), 8.63 (d, J=2Hz, 1H), 8.81 (d, J=2Hz, 1H), 10.51
(s, 1H), 13.94 (hrs, 1H), ESIMS found for C25H26N602 m/z 443.4 (M+H).
[0459[ N—(6-Ethoxypy1idin-3 -yl)-5 -(5 -(piperidinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 45.
[0460[ White solid (98 mg, 0.21 mmol, 44% yield). 1H NMR (DMSO-ds) 5 ppm
1.32 (t, J=7Hz, 3H), 1.34-1.42 (m, 2H), 1.47-1.53 (m, 4H), 2.38 (brs, 4H), 3.56
, (s, 2H), 4.29
(q, J=7Hz, 2H), 6.81 (d, J=9Hz, 1H), 7.81 (d/Abq, J=9Hz, J=2Hz, 2H), 7.99 (t, J=2Hz, 1H),
8.16 (dd, J=9Hz, J=3Hz, 1H), 8.46 (d, J=1Hz, 1H), 8.49 (d, J=2Hz, 1H), 8.63 (d, J=2Hz, 1H),
8.81 (d, J=2Hz, 1H), 10.51 (s, 1H), 13.92 (hrs, 1H), ESIMS found for C26H28N602 m/z 457.3
(M+H).
[0461[ 5 -(5 -(Pipe1idinylmethyl)pyridin-3 -yl)-N-(pyridin-3 -yl)-1H-indazole-3 -
amide 46.
[0462[ White solid (126 mg, 0.31 mmol, 52% yield). 1H NMR (DMSO-ds) 5 ppm
1.36-1.42 (m, 2H), 1.48-1.55 (m, 4H), 2.39 (brs, 4H), 3.57 (s, 2H), 7.40 (dd, J=8Hz, J=5Hz,
1H), 7.83 (d/Abq, J=9Hz, J=2Hz, 2H), 7.99 (t, J=2Hz, 1H), 8.30-8.34 (m, 2H), 8.48 (d, J=1Hz,
1H), 8.49 (d, J=2Hz, 1H), 8.82 (d, J=2Hz, 1H), 9.08 (d, J=2Hz, 1H), 10.70 (s, 1H), 14.00 (hrs,
1H), ESIMS found for C24H24N60 m/z 413.0 (M+H).
[0463[ 5 -(5 -(Pipe1idinylmethyl)pyridin-3 -yl)-N-(4-(trifluoromethyl) pyridinyl)-1H-indazole-3 -carboxamide 47.
[0464[ White solid (150 mg, 0.31 mmol, 71% yield). 1H NMR (DMSO-ds) 5 ppm
.42 (m, 2H), 1.46-1.53 (m, 4H), 2.37 (brs, 4H), 3.55 (s, 2H), 7.81-7.87 (m, 3H), 7.98 (s,
1H), 8.41 (s, 1H), 8.48 (d, J=2Hz, 1H), 8.75 (d, J=5Hz, 1H), 8.80 (d, J=2Hz, 1H), 9.07 (s, 1H),
.22 (s, 1H), 14.06 (hrs, 1H), ESIMS found for C25H23F3N60 m/z 481.0 (M+H).
[0465[ N—(Pyridin-3 -yl)-5 -(3 -(pyrrolidinylmethyl)phenyl)-1H-indazole-3 -
carboxamide 49.
[0466[ Tan amorphous solid (53.4 mg, 0.13 mmol, 72% yield). 1H NMR (DMSO-
d6) 5 ppm 1.70-1.71 (m, 4H), 2.47-2.49 (m, 4H), 3.67 (s, 2H), 7.31 (d, J=8Hz, 1H), 7.40 (dd,
J=8Hz, J=5Hz, 1H), 7.44 (t, J=8Hz, 1H), 7.58-7.60 (m, 1H), 7.63-7.64 (m, 1H), .78 (m,
2H), 8.30-8.34 (m, 2H), 8.44 (s, 1H), 9.08 (d, J=2Hz, 1H), 10.68 (s, 1H), 13.93 (s, 1H), ESIMS
found for C24H23N50 m/Z 398 (M+H).
[0467[ N—(6-Phenylpy1idin-3 -yl)-5 -(5 -(pyrrolidinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 50.
[0468[ Tan flaky solid (61.3 mg, 0.13 mmol, 74% yield). 1H NMR (DMSO-ds) 5
ppm 1.71-1.72 (m, 4H), 3.72 (s, 2H), 7.39-7.42 (m, 1H), 7.47-7.50 (m, 2H), 7.81-7.86 (m, 2H),
8.00 (d,J=9Hz, 1H), 8.02-8.03 (m, 1H), 8.08-8.10 (m, 2H), 8.45 (dd, J=9Hz, J=3Hz, 1H), 8.49-
8.50 (m, 1H), 8.51 (d, J=2Hz, 1H), 8.83 (d, J=2Hz, 1H), 9.18 (d, J=3Hz, 1H), 10.81 (s, 1H),
14.03 (s, 1H), ESIMS found for C29H26N60 m/z 475 (M+H).
[0469[ idin-3 -yl)-5 -(6-(pyrrolidinyl)py1idin-3 -yl)-1H-indazole-3 -
carboxamide 51.
[0470[ Yellow solid (32 mg, 0.08 mmol, 37.8% yield). 1H NMR (DMSO-ds) 5
ppm 1.94-2.01 (m, 4H), 3.42-3.48 (m, 4H), 6.57 (d, J=9Hz, 1H), 7.40 (dd, J=8Hz, J=5Hz, 1H),
7.72 (d, J=1Hz, 2H), 7.85 (dd, J=9Hz, J=3Hz, 1H), 8.29-8.34 (m, 3H), 8.43 (d, J=2Hz, 1H),
9.08 (d, J=2Hz, 1H), 10.63 (s, 1H), 13.87 (s, 1H), ESIMS found for szHzoNsO m/z 385.0
(M+H).
[0471 [ yanopy1idinyl)(5-(pyrrolidinylmethyl)py1idinyl)-1H-
indazolecarboxamide 52.
[0472[ Beige solid (52 mg, 0.12 mmol, 49.1% yield). 1H NMR (DMSO-ds) 5 ppm
1.70-1.75 (m, 4H), 3.31-3.36 (m, 4H), 7.85 (dq, J=9Hz, J=2Hz, 2H), 8.02 (s, 1H), 8.05 (d,
J=9Hz, 1H), 8.47 (s, 1H), 8.52 (d, J=2Hz, 1H), 8.58 (dd, J=9Hz, J=3Hz, 1H), 8.82 (d, J=2Hz,
1H), 9.28 (d, J=2Hz, 1H), 11.18 (s, 1H), 14.13 (hrs, 1H), ESIMS found for C24H21N7O m/Z
424.3 (M+H).
[0473[ 5-(6-Methoxypyn'dinyl)-N-(pyIidinyl)-1H-indazolecarboxamide
[0474[ White solid (79.7 mg, 0.23 mmol, 44.2% yield). 1H NMR dg) 5
ppm 3.91 (s, 3H), 6.95 (d, J=9Hz, 1H), 7.40 (dd, J=9Hz, J=5Hz, 1H), 7.78 (dd, J=11Hz, J=2Hz,
2H), 8.06 (dd, J=9Hz, J=3Hz, 1H), 8.29-8.34 (m, 2H), 8.39 (s, 1H), 8.51 (d, J=2Hz, 1H), 9.08
(d, J=3Hz, 1H), 10.67 (s, 1H), 13.91 (hrs, 1H), ESIMS found for C19H15N502 m/z 346.0 (M+H).
[0475 [ 5 -(5 -Benzylpyridin-3 -yl)-N-(pyIidin-3 -yl)-1H-indazole-3 -carboxamide
[0476[ Yellow solid (101.9 mg, 0.25 mmol, 76% yield). 1H NMR dg) 5
ppm 4.09 (s, 2H), 7.19-7.23 (m, 1H), 7.30-7.35 (m, 4H), 7.39-7.41 (m, 1H), 7.78-7.82 (m, 2H),
7.99 (t, J=2Hz, 1H), 8.31-8.33 (m, 2H), 8.45 (s, 1H), 8.51 (d, J=2Hz, 1H), 8.76 (d, J=2Hz, 1H),
9.08 (d, J=2Hz, 1H), 10.69 (s, 1H), 14.00 (s, 1H), ESIMS found for C25H19N50 m/Z 406 (M+H).
00 Q
[0477 [ 5 -(5 xypy1idin-3 -yl)-N-(py1idin-3 -yl)-1H-indazole-3 -carboxamide
[0478[ White solid (73.6 mg, 0.18 mmol, 75%yield). 1H NMR (DMSO-ds) 5 ppm
7.17-7.18 (m, 2H), 7.22-7.23 (m, 1H), 7.38-7.41 (m, 1H), 7.44-7.47 (m, 2H), 7.72-7.73 (m,
1H), 7.80-7.81 (m, 2H), 8.29-8.31 (m, 2H), 8.37-8.38 (m, 1H), 8.44-8.45 (m, 1H), 8.74 (d,
J=2Hz, 1H), 9.06 (d, J=2Hz, 1H), 10.69 (s, 1H), 14.00 (s, 1H), ESIMS found for C24H17N502
m/z 408 (M+H).
[0479[ 5 -(5 -(Pyrrolidinylmethyl)pyridin-3 -yl)-N-(4-(t1ifluoromethyl) pyIidinyl)-1H-indazole-3 -carboxamide 57 .
[0480[ White solid (64 mg, 0.14 mmol, 35.2% yield). 1H NMR (DMSO-ds) 5 ppm
1.67-1.74 (m, 4H), 2.44-2.52 (m, 4H), 3.70 (s, 2H), 7.81-7.88 (m, 3H), 8.00 (d, J=2Hz, 1H),
8.41 (s, 1H), 8.50 (d, J=2Hz, 1H), 8.75 (d, J=5Hz, 1H), 8.81 (d,J=2Hz, 1H), 9.07 (s, 1H), 10.22
(s, 1H), 14.01 (brs, 1H), ESIMS found for C24H21F3N60 m/z 467.3 (M+H).
[0481[ 5-(5-(Cyclohexylcarbamoyl)py1idinyl)-N-(py1idinyl)-1H-indazole-
3-carboxamide 59.
[0482[ Light brown solid (117 mg, 0.27 mmol, 49.7% yield). 1H NMR (DMSO-
d6) 5ppm 1.10-1.21 (m, 1H), 1.28-1.39 (m, 4H), 1.63 (d,J=12Hz, 1H), 1.72-1.78 (m, 2H), 1.86-
1.91 (m, 2H), 3.77-3.87 (m, 1H), 7.41 (dd, J=8Hz, J=5Hz, 1H), 7.84 (d, J=8Hz, 1H), 7.91 (d,
J=9Hz, 1H), .36 (m, 2H), 8.48 (t, J=2Hz, 1H), 8.55 (s, 1H), 8.59 (d, J=8Hz, 1H), 8.99
(d, J=2Hz, 1H), 9.04 (d, J=2Hz, 1H), 9.09 (d,J=2Hz, 1H), 10.72 (s, 1H), 14.04 (s, 1H), ESIMS
found for C25H24N602 m/z 441.0 (M+H).
[0483[ 5 -(3 o-5 -((4-methylpiperazinyl)methyl)phenyl)-N-(4-
(tiifluoromethyl)pyridinyl)-1H-indazole-3 -carboxamide 60.
[0484[ White solid (43 mg, 0.08 mmol, 76.3% yield). 1H NMR (DMSO-ds) 5 ppm
1.23 (s, 3H), 2.22-2.50 (m, 8H), 3.56 (s, 2H), 7.12 (d, J=9Hz, 1H), 7.42 (dd, J=8Hz, J=2Hz,
1H), 7.47 (s, 1H), 7.80 (d, J=1Hz, 2H), 7.85 (d, J=5Hz, 1H), 8.39 (s, 1H), 8.75 (d, J=5Hz, 1H),
9.08 (s, 1H), 10.22 (s, 1H), 14.02 (hrs, 1H), ESIMS found for C26H24F4N60 m/z 513.3 (M+H).
[0485[ 5 -(5 -((4-Methylpiperazinyl)methyl)py1idin-3 -yl)-N-(pyIidin-3 -yl)-1H-
lecarboxamide 61.
[0486[ White solid (81.6 mg, 0.19 mmol, 55% yield). 1H NMR (DMSO-ds) 5 ppm
2.14 (s, 3H), 2.33-2.42 (m, 8H), 3.60 (s, 2H), .41 (m, 1H), 7.81-7.85 (m, 2H), 8.00-8.01
(m, 1H), 8.31-8.33 (m, 2H), 8.47-8.48 (m, 1H), 8.49 (d, J=2Hz, 1H), 8.82 (d, J=2Hz, 1H), 9.08
(d, J=3Hz, 1H), 10.74 (s, 1H), 14.00 (s, 1H), ESIMS found for C24H25N7O m/Z 427.8 (M+H).
[0487[ N—(6-Cyanopy1idin-3 -yl)-5 -(5 -(pipe1idinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 62.
[0488[ Off-white solid (42 mg, 0.10 mmol, 36.9% yield). 1H NMR (DMSO-ds) 5
ppm 1.36-1.42 (m, 2H), 1.47-1.54 (m, 4H), 2.38 (brs, 4H), 3.57 (s, 2H), 7.85 (d, J=1Hz, 2H),
8.00 (t, J=2Hz, 1H), 8.05 (d, J=9Hz, 1H), 8.47 (d, J=1Hz, 1H), 8.50 (d, J=2Hz, 1H), 8.58 (dd,
J=9Hz, J=3Hz, 1H), 8.82 (d, J=2Hz, 1H), 9.28 (d, J=2Hz, 1H), 11.18 (s, 1H), 14.12 (hrs, 1H);
ESIMS found for C25H23N7O m/Z 438.1 (M+H).
[0489[ 5 -(5 -(PipeIidinylmethyl)pyridin-3 -yl)-N-(6-(trifluoromethyl) pyridin-
3-yl)-1H-indazolecarboxamide 63.
[0490[ White solid (78 mg, 0.16 mmol, 49% yield). 1H NMR (DMSO-ds) 5 ppm
1.35-1.44 (m, 2H), .57 (m, 4H), 2.40 (brs, 4H), 3.59 (brs, 2H), 7.85 (s, 2H), 7.93 (d,
J=9Hz, 1H), 8.01 (s, 1H), 8.48 (s, 1H), 8.50 (s, 1H), 8.63 (d, J=8Hz, 1H), 8.83 (s, 1H), 9.27 (s,
1H), 11.11 (s, 1H), 14.11 (hrs, 1H); ESIMS found for C25H23F3N60 m/z 481.1 (M+H).
[0491 [ 5 -(5 -(Morpholinomethyl)pyridin-3 -yl)-N-(pyIidin-3 -yl)-1H-indazole-3 -
amide 64.
[0492[ White solid (77 mg, 0.19 mmol, 66% yield). 1H NMR (DMSO-ds) 5 ppm
2.41-2.43 (m, 4H), 3.58-3.60 (m, 4H), 3.61 (s, 2H), 7.39-7.41 (m, 1H), 7.81-7.85 (m, 2H), 8.02-
8.03 (m, 1H), 8.31-8.33 (m, 2H), 8.47-8.48 (m, 1H), 8,51 (d,J=2Hz, 1H), 8.83 (d,J=2Hz, 1H),
9.08 (d, J=2Hz, 1H), 10.70 (s, 1H), 14.00 (s, 1H); ESIMS found for C23H22N602 m/Z 415
(M+H).
[0493[ N—(6-Phenylpy1idin-3 -yl)-5 -(5 1idinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 65.
[0494[ White solid (61.5 mg, 0.13 mmol, 68% yield). 1H NMR (DMSO-ds) 5 ppm
1.39-1.40 (m, 2H), 1.49-1.53 (m, 4H), 2.38-2.39 (m, 4H), 3.57 (s, 2H), 7.39-7.43 (m, 1H), 7.47-
7.50 (m, 2H), 7.82-7.86 (m, 2H), 7.99-8.01 (m, 2H), 8.08-8.10 (m, 2H), 8.44 (dd, J=9Hz,
J=3Hz, 1H), 8.50-8.51 (m, 2H), 8.83 (d,J=2Hz, 1H), 9.18 (d,J=3Hz, 1H), 10.81 (s, 1H), 14.02
(s, 1H), ESIMS found for N60 m/z 489 (M+H).
[0495[ 5-(5-Cyanopyridinyl)-N-(py1idinyl)-1H-indazolecarboxamide
[0496[ Beige solid (107 mg, 0.31 mmol, 66.7% yield). 1H NMR (DMSO-ds) 5
ppm 7.40 (dd, J=8Hz, J=4Hz, 1H), 7.84 (d, J=8Hz, 1H), 7.91 (dd, J=9Hz, J=2Hz, 1H), 8.30-
8.34 (m, 2H), 8.57 (s, 1H), 8.72 (t, J=2Hz, 1H), 9.03 (d, J=2Hz, 1H), 9.09 (d, J=2Hz, 1H), 9.23
(d, J=2Hz, 1H), 10.72 (s, 1H), 14.06 (s, 1H), ESIMS found for C19H12N60 m/z 340.8 (M+H).
[0497[ 5 -(3 -Fluoro-5 1idinylmethyl)phenyl)-N-(py1idin-3 -yl)-1H-
indazolecarboxamide 67.
[0498[ Yellow solid (84 mg, 0.20 mmol, 66% yield). 1H NMR (DMSO-ds) 5 ppm
1.37-1.39 (m, 2H), 1.49-1.54 (m, 4H), 2.37-2.38 (m, 4H), 3.54 (s, 2H), 7.12-7.13 (m, 1H), 7.39-
7.43 (m, 2H), 7.47-7.48 (m, 1H), 7.77-7.81 (m, 2H), 8.31-8.33 (m, 2H), 8.44-8.45 (m, 1H), 9.08
(d, J=2Hz, 1H), 10.69 (s, 1H), 13.97 (s, 1H), ESIMS found for C25H24FN50 m/z 430 (M+H).
[0499[ 5 -(5 -(Morpholinomethyl)pyridin-3 -yl)-N-(6-(t1ifluoromethyl)py1idin-3 -
yl)-1H-indazolecarboxamide 68.
[0500[ White solid (72 mg, 0.15 mmol, 30.5% yield). 1H NMR (DMSO-ds) 5 ppm
2.43 (brs, 4H), 3.56-3.63 (m, 4H), 3.62 (s, 2H), 7.85 (Abq, J=9Hz, 2H), 7.93 (d, J=9Hz, 1H),
8.04 (s, 1H), 8.49 (s, 1H), 8.52 (d, J=1Hz, 1H), 8.63 (dd, J=9Hz, J=3Hz, 1H), 8.84 (d, J=2Hz,
1H), 9.27 (d, J=2Hz, 1H), 11.11 (s, 1H), 14.11 (hrs, 1H), ESIMS found for C24H21F3N602 m/z
483.3 (M+H).
[0501 [ N-(6-Morpholinopy1idinyl)-5 -(5 -(pipe1idinylmethyl)py1idin-3 -yl)-
1H-indazole-3 -carboxamide 69.
[0502[ Light yellow solid (58 mg, 0.12 mmol, 36.4% yield). 1H NMR (DMSO-
d6) 5 ppm 1.37-1.44 (m, 2H), 1.51 (quin, J=5Hz, 4H), .40 (m, 4H), 3.40 (t, J=5Hz, 4H),
3.56 (s, 2H), 3.71 (t, 5Hz, 4H), 6.89 (d, J=9Hz, 1H), 7.78 (d, J=8Hz, 1H), 7.81 (d, J=9Hz, 1H),
7.97 (t, J=2Hz, 1H), 8.06 (dd, J=9Hz, J=2Hz, 1H), 8.46 (d, J=10Hz, 1H), 8.60 (d, J=2Hz, 1H),
8.79 (d, J=2Hz, 1H), 10.35 (s, 1H), 13.90 (hrs, 1H), ESIMS found for C28H31N702 m/Z 498.0
(M+H).
[0503[ 4-Methylpiperazinyl)pyIidin-3 -yl)-5 -(5 -(piperidin
ylmethyl)pyn'din-3 -yl)-1H-indazole-3 -carboxamide 70.
[0504[ Light yellow solid (37 mg, 0.07 mmol, 39.2% yield). 1H NMR (DMSO-
d6) 5 ppm 1.37-1.44 (m, 2H), 1.51 (quin, J=5Hz, 4H), 2.22 (s, 3H), 2.35-2.42 (m, 8H), 3.44 (t,
J=5Hz, 4H), 3.56 (s, 2H), 6.86 (d, J=9Hz, 1H), 7.79 (d, J=9Hz, 1H), 7.82 (d, , 1H), 7.98
(d, J=2Hz, 1H), 8.03 (dd,J=9Hz,J=3Hz, 1H), 8.48 (d, J=11Hz, 1H), 8.58 (d, J=3Hz, 1H), 8.81
(d, J=3Hz, 1H), 10.34 (s, 1H), 13.89 (hrs, 1H); ESIMS found for C29H34N80 m/z 511.5 (M+H).
[0505[ 5 -(5 -(PipeIidinylmethyl)pyridin-3 -yl)-N-(6-(pyrrolidinyl) pyIidinyl)-1H-indazole-3 -carboxamide 71.
[0506[ Tan solid (53.9 mg, 0.11 mmol, 53% yield). 1H NMR (DMSO-ds) 5 ppm
.39 (m, 2H), 1.51-1.52 (m, 4H), 1.93-1.96 (m, 4H), 2.36-2.38 (m, 4H), 3.36-3.39 (m,
4H), 3.56 (s, 2H), 6.46 (d, J=9Hz, 1H), 7.78-7.83 (m, 2H), 7.96 (dd, J=9Hz, J=3Hz, 1H), 7.98-
7.99 (m, 1H), 8.46-8.47 (m, 2H), 8.49 (, d, J=3Hz, 1H), 8.80-8.81 (m, 1H), 10.23 (s, 1H), 13.87
(s, 1H); ESIMS found for C28H31N7O m/z 482 (M+H).
[0507[ N—(6-(3 ophenyl)pyridin-3 -yl)-5 -(5 -(piperidin- l -ylmethyl) pyIidin-
3-yl)- lH-indazole-3 -carboxamide 72.
[0508[ White solid (54.8 mg, 0.11 mmol, 64% yield). 1H NMR (DMSO'dG) 5 ppm
1.39-1.40 (m, 2H), 1.50-1.54 (m, 4H), 2.38-2.39 (m, 4H), 3.57 (s, 2H), 7.22-7.26 (m, 1H), 7.51-
7.55 (m, 1H), 7.82-7.86 (m, 2H), 7.88-7.91 (m, 1H), 7.94-7.96 (m, 1H), 8.00-8.01 (m, 1H), 8.06
(d, J=9Hz, 1H), 8.46 (dd, J=9Hz, J=3Hz, 1H), 8.50 (s, 2H), 8.82 (d, J=2Hz, 1H), 9.20 (d,
J=2Hz, 1H), 10.86 (s, 1H), 14.03 (s, 1H); ESIMS found for C30H27FN60 m/Z 507 (M+H).
[0509[ N-(6-(4-Fluorophenyl)pyridin-3 -yl)-5 -(5 -(piperidin- l -ylmethyl) pyIidin-
3-yl)- lH-indazole-3 -carboxamide 73.
[0510[ White solid (50.8 mg, 0.10 mmol, 55% yield). 1H NMR (DMSO'dG) 5 ppm
.40 (m, 2H), 1.49-1.53 (m, 4H), .39 (m, 4H), 3.57 (s, 2H), 7.29-7.32 (m, 2H), 7.82-
7.86 (m, 2H), 7.98-8.01 (m, 2H), 8.12-8.15 (m, 2H), 8.43 (dd, J=9Hz, J=3Hz, 1H), 8.49 (s, 2H),
8.82 (d, J=2Hz, 1H), 9.17 (d, J=3Hz, 1H), 10.81 (s, 1H), 14.02 (s, 1H); ESIMS found for
C30H27FN60 m/Z 507 (M+H).
[051 1[ N-(6-((2-(Dimethylamino)ethyl)(methyl)amino)py1idin-3 -yl)-5 -(5 -
(piperidinylmethyl)pyridin-3 -yl)-1H-indazole-3 -carboxamide 74.
[0512[ Light yellow solid (88.5 mg, 0.17 mmol, 61.7% yield). 1H NMR (DMSO-
d6) 5 ppm 1.38-1.42 (m, 2H), 1.51 (quin, J=5Hz, 4H), 2.18 (s, 6H), .40 (m, 6H), 2.99 (s,
3H), 3.56 (s, 2H), 3.61 (t, J=7Hz, 2H), 6.61 (d, J=9Hz, 1H), 7.79 (d, J=9Hz, 1H), 7.81 (d,
J=9Hz, 1H), 7.95 (dd, J=9Hz, J=3Hz, 1H), 7.98 (t, J=2Hz, 1H), 8.46 (s, 1H), 8.48 (d, J=2Hz,
2H), 8.81 (d, J=2Hz, 1H), 10.24 (s, 1H), 13.84 (hrs, 1H), ESIMS found for C29H36N80 m/z
513.5 (M+H).
[0513[ 5 -(5 -(Pipe1idinylmethyl)pyridin-3 -yl)-N-(pyridazinyl)-1H-
indazolecarboxamide 75.
[0514[ White solid (53 mg, 0.13 mmol, 33.7% yield). 1H NMR (DMSO-ds) 5 ppm
1.36-1.43 (m, 2H), 1.47-1.54 (m, 4H), 2.33-2.42 (m, 4H), 3.57 (s, 2H), 7.85 (s, 2H), 8.00 (t,
J=2Hz, 1H), 8.25 (dd, J=6Hz, J=3Hz, 1H), 8.47 (t, J=1Hz, 1H), 8.50 (d, J=2Hz, 1H), 8.82 (d,
J=2Hz, 1H), 9.09 (d, J=6Hz, 1H), 9.71 (dd, J=3Hz, J=1Hz, 1H), 11.16 (s, 1H), 14.16 (hrs, 1H),
ESIMS found for C23H23N7O m/z 414.1 (M+H).
[0515[ 5 -(5 -(PipeIidinylmethyl)pyridin-3 -yl)-N-(pyridin-3 -ylmethyl)-1H-
indazolecarboxamide 76.
[0516[ White solid (26.8 mg, 0.06 mmol, 27% yield). 1H NMR (DMSO-ds) 5 ppm
1.38-1.39 (m, 2H), .51 (m, 4H), 2.36-2.37 (m, 4H), 3.55 (s, 2H), 4.53 (d, J=6Hz, 2H),
7.35 (dd, J=8Hz, J=5Hz, 1H), 7.74-7.80 (m, 3H), 7.95-7.96 (m, 1H), .42 (m, 1H), 8.45-
8.46 (m, 1H), 8.48-8.49 (m, 1H), 8.58-8.59 (m, 1H), 8.78 (d, J=2Hz, 1H), 9.17 (t, J=6Hz, 1H),
13.77 (s, 1H), ESIMS found for C25H26N60 m/z 427 (M+H).
[0517[ ohexyl(5-(pipeIidinylmethyl)pyIidinyl)-1H-indazole
carboxamide 77.
[0518[ White solid (50.4 mg, 0.12 mmol, 72.5% yield). 1H NMR (DMSO-ds) 5
ppm 1.12-1.47 (m, 7H), 1.50-1.53 (m, 4H), 1.60-1.63 (m, 1H), 1.73-1.75 (m, 2H), 1.83-1.84
(m, 2H), 2.37-2.38 (m, 4H), 3.55 (s, 2H), 3.81-3.87 (m, 1H), 7.73-7.78 (m, 2H), 7.95-7.96 (m,
1H), 8.14 (d, J=8Hz, 1H), 8.41-8.42 (m, 1H), 8.47 (d, J=2Hz, 1H), 8.78 (d, J=2Hz, 1H), 13.67
(s, 1H), ESIMS found for C25H31N50 m/z 418 (M+H).
[0519[ N-(Benzo[d][1,3]dioxol-5 -yl)-5 -(5 -(pipeIidinylmethyl)pyIidin-3 -yl)-
1H-indazolecarboxamide 78.
[0520[ White solid (48.6 mg, 0.11 mmol, 22.1% yield). 1H NMR (DMSO-dg) 5
ppm 1.37-1.43 (m, 2H), 1.51 (quin, J=5Hz, 4H), 2.36-2.42 (m, 4H), 3.56 (s, 2H), 6.01 (s, 2H),
6.90 (d, J=9Hz, 1H), 7.37 (dd, J=9Hz, J=2Hz, 1H), 7.57 (d, J=2Hz, 1H), 7.91 (dd, J=9Hz,
J=Hz, 1H), 7.82 (dd, J=9Hz, J=1Hz, 1H), 7.99 (t, J=2Hz, 1H), 8.47 (dd, , J=2Hz, 1H),
8.81 (d, J=2Hz, 1H), 10.34 (s, 1H), 13.89 (s, 1H), ESIMS found for C26H25N503 m/z 456.0
(M+H).
[0521[ N—(2,3-Dihydrobenzo[b][1,4]di0Xinyl)(5-(pipe1idinylmethyl)
pyn'din-3 -yl)-1H-indazole-3 xamide 79.
[0522[ White solid (98.4 mg, 0.21 mmol, 38.7% yield). 1H NMR (DMSO-ds) 5
ppm 1.36-1.42 (m, 2H), 1.51 (quin, J=5Hz, 4H), 2.34-2.41 (m, 4H), 3.56 (s, 2H), 4.20-4.27 (m,
4H), 6.82 (d,J=9Hz, 1H), 7.35 (dd, J=9Hz, J=3Hz, 1H), 7.51 (d, J=3Hz, 1H), 7.78 (dd, J=9Hz,
J=1Hz, 1H), 7.81 (dd, J=9Hz, J=1Hz, 1H), 7.98 (t, J=2Hz, 1H), 8.47 (dd, J=12Hz,J=2Hz, 1H),
8.81 (d, J=2Hz, 1H), 10.26 (s, 1H), 13.87 (hrs, 1H), ESIMS found for C27H27N503 m/z 470.4
(M+H).
[0523[ N—(5 -Benzylpy1idin-3 -yl)-5 -(5 -(pipe1idinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 80.
[0524[ White solid (81.9 mg, 0.16 mmol, 59% yield). 1H NMR (DMSO-ds) 5 ppm
1.39-1.41 (m, 2H), .53 (m, 4H), 2.37-2.39 (m, 4H), 3.56 (s, 2H), 4.00 (s, 2H), 7.20-7.23
(m, 1H), 7.28-7.34 (m, 4H), 7.79-7.84 (m, 2H), 7.98-7.99 (m, 1H), 8.23-8.24 (m, 1H), 8.25 (d,
J=2Hz, 1H), .46 (m, 1H), 8.49 (d,J=2Hz, 1H), 8.81 (d, J=2Hz, 1H), 8.89 (d, J=2Hz, 1H),
.65 (s, 1H), 13.97 (s, 1H), ESIMS found for C31H30N60 m/z 503 (M+H).
[0525[ 5 -(5 -(Pipe1idin- l -ylmethyl)pyridin-3 -yl)-N-(pyrazinyl)- lH-indazole-
3-carboxamide 81.
[0526[ White solid (104 mg, 0.25 mmol, 41.7% yield). 1H NMR (DMSO-ds) 5
ppm 1.35-1.42 (m, 2H), 1.51 (quin, J=5Hz, 4H), 2.33-2.42 (m, 4H), 3.57 (s, 2H), 7.83 (d,
J=9Hz, 1H), 7.85 (d, J=9Hz, 1H), 8.00 (s, 1H), 8.45 (d, J=2Hz, 1H), 8.46 (s, 1H), 8.50 (s, 1H),
8.83 (d, J=2Hz, 1H), 9.50 (s, 1H), 10.36 (s, 1H), 14.11 (brs, 1H), ESIMS found for C23H23N7O
m/z 413.9 (M+H).
[0527 [ N—Phenyl-5 -(5 -(pipe1idin-l-ylmethyl)py1idin-3 -yl)- lH-indazole-3 -
carboxamide 82.
[0528[ White solid (97.8 mg, 0.24 mmol, 81% . 1H NMR (DMSO-ds) 5 ppm
1.39-1.40 (m, 2H), 1.49-1.53 (m, 4H), 2.37-2.39 (m, 4H), 3.57 (s, 2H), 7.09-7.12 (m, 1H), 7.34-
7.37 (m, 2H), 7.80 (d, J=9Hz, 1H), 7.83 (dd, J=9Hz, 2Hz, 1H), 7.907.92 (m, 2H), 7.99-8.00
(m, 1H), 8.47-8.48 (m, 1H), 8.49 (d, J=2Hz, 1H), 8.81 (d, J=2Hz, 1H), 10.40 (s, 1H), 13.92 (s,
1H), ESIMS found for C25H25N50 m/z 412 (M+H).
[0529[ (4-Methylpiperazin- l -yl)(5 -(5 -(pipe1idin-l-ylmethyl)py1idin-3 -yl)- lH-
indazol-3 -yl)methanone 83.
[0530[ Light yellow ous solid (74.6 mg, 0.18 mmol, 93% yield). 1H NMR
(DMSO-dg) 5 ppm 1.38-1.39 (m, 2H), 1.48-1.53 (m, 4H), 2.22 (s, 3H), 2.36-2.41 (m, 8H), 3.55
(s, 2H), .73 (m, 2H), .02 (m, 2H), 7.73 (d, J=9Hz, 1H), 7.79 (dd, J=9Hz, J=2Hz,
1H), 7.95-7.96 (m, 1H), 8.22 (d, J=1Hz, 1H), 8.46 (d, J=2Hz, 1H), 8.78 (d, J=2Hz, 1H), 13.64
(s, 1H), ESIMS found for C24H30N60 m/z 419 (M+H).
[0531[ 5-(5-(((2R,6S)-2,6-Dimethylpipe1idinyl)methyl)py1idinyl)-N-
(pyridinyl)-1H-indazolecarboxamide 84.
[0532[ Beige solid (76.5 mg, 0.17 mmol, 75.5% yield). 1H NMR (DMSO-ds) 5
ppm 1.00 (d, J=6Hz, 6H), .35 (m, 3H), 1.55 (d, J=11Hz, 2H), 1.60-1.65 (m, 1H), 2.45-
2.53 (m, 2H), 3.84 (s, 1H), 7.40 (dd, J=7Hz, 3Hz, 1H), 7.79 (dd, J=9Hz, J=2Hz, 1H), 7.83 (dd,
J=9Hz, J=1Hz, 1H), 8.04 (s, 1H), 8.29-8.35 (m, 2H), 8.46 (s, 1H), 8.60 (d, J=2Hz, 1H), 8.73
(d, J=2Hz, 1H), 9.08 (d, J=3Hz, 1H), 10.70 (s, 1H), 14.00 (hrs, 1H), ESIMS found for
C26H28N60 m/z 441.3 (M+H).
[0533[ (Dimethylamino)methyl)py1idin-3 -yl)-5 -(5 -(pipe1idin
ylmethyl)py1idinyl)-1H-indazolecarboxamide 86.
[0534[ White solid (41.5 mg, 0.09 mmol, 72% yield). 1H NMR (DMSO-ds) 5 ppm
1.39-1.40 (m, 2H), 1.49-1.54 (m, 4H), 2.19 (s, 6H), 2.36-2.39 (m, 4H), 3.44 (s, 2H), 3.58 (s,
2H), 7.81 (d, J=9Hz, 1H), 7.85 (dd, J=9Hz, J=2Hz, 1H), 8.00-8.01 (m, 1H), 8.21 (d, J=2Hz,
1H), 8.37-8.38 (m, 1H), 8.49-8.50 (m, 2H), 8.83 (d, J=2Hz, 1H), 8.91 (d, J=2Hz, 1H), 10.69 (s,
1H), 14.01 (hrs, 1H), ESIMS found for C27H31N7O m/z 470 (M+H).
[0535[ N-(1-Methylpipe1idinyl)-5 -(5 -(piperidinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 87.
[0536[ White ous solid (18.2 mg, 0.04 mmol, 59.8% . 1H NMR
(DMSO-dg) 5 ppm 1.39-1.40 (m, 2H), 1.49-1.53 (m, 4H), 1.66-1.75 (m, 4H), 1.95-2.00 (m, 2H),
2.18 (s, 3H), 2.37-2.38 (m, 4H), 2.77 (d, J=11Hz, 2H), 3.55 (s, 2H), 3.81-3.83 (m, 1H), 7.73-
7.75 (m, 1H), 7.77-7.79 (m, 1H), 7.95-7.96 (m, 1H), 8.25 (d, J=8Hz, 1H), 8.41-8.42 (m, 1H),
8.47 (d, J=2Hz, 1H), 8.78 (d, J=2Hz, 1H), 13.70 (s, 1H); ESIMS found for C25H32N60 m/z 433
(M+H).
[0537[ N-(5-((Dimethylamino)methyl)py1idinyl)(5-(pyrrolidin
ylmethyl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 106.
[0538[ White solid (39.4 mg, 0.09 mmol, 74% yield). 1H NMR (DMSO-ds) 5 ppm
1.71-1.73 (m, 4H), 2.49-2.50 (m, 4H), 2.18 (s, 6H), 3.43 (s, 2H), 3.71 (s, 2H), 7.81 (d, J=9Hz,
1H), 7.84 (ABq, J=9Hz, 1H), 8.02-8.03 (m, 1H), 8.21 (d, J=2Hz, 1H), .38 (m, 1H), 8.48-
8.49 (m, 1H), 8.51 (d, J=2Hz, 1H), 8.83 (d, J=2Hz, 1H), 8.91 (d, J=2Hz, 1H), 10.68 (s, 1H),
13.98 (s, 1H); ESIMS found for C26H29N7O m/z 456 (M+H).
[0539[ N-(5-((4-Methylpiperazinyl)methyl)py1idinyl)(5-(pipe1idin
ylmethyl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 124.
[0540[ N—(6-(Pipe1idinyl)py1idin-3 -yl)-5 -(5 -(pipe1idinylmethyl)py1idin-3 -
yl)-1H-indazolecarboxamide 126.
[0541[ Grey solid (92.7 mg, 0.19 mmol, 29.0% yield). 1H NMR (DMSO-ds) 5
ppm 1.48-1.64 (m, 12H), .43 (m, 4H), 3.48 (t, J=4.5Hz, 4H), 3.56 (s, 2H), 6.83 (d, J=9Hz,
1H), 7.80 (ABq, J=10Hz, 2H), 7.98 (s, 1H), 8.00 (d, J=2.4Hz, 1H), 8.47 (d, J=10Hz, 2H), 8.55
(d, J=2.5Hz, 1H), 8.81 (d, J=2Hz, 1H), 10.27 (s, 1H), 13.86 (s, 1H), ESIMS found for
C29H33N7O m/z 496.5 (M+H).
[0542[ N—(3 -Fluorophenyl)-5 -(5 ridinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 162.
[0543[ White solid (176 mg, 0.41 mmol, 56.8% yield). 1H NMR (DMSO-ds) 5
ppm 1.36-1.43 (m, 2H), 1.47-1,55 (m, 4H), 2.38 (brs, 4H), 3.56 (s, 2H), 6.93 (dt, J=9Hz, J=3Hz,
1H), 7.39 (q, J=8Hz, 1H), 7.75 (dd, J=8Hz, J=1Hz, 1H), 7.82 (d/Abq, J=9Hz, J=1Hz, 2H), 7.89
(td, J=12Hz, J=2Hz, 1H), 7.99 (t, J=2Hz, 1H), 8.47 (s, 1H), 8.49 (d, J=2Hz, 1H), 8.82 (d,
J=2Hz, 1H), 10.66 (s, 1H), 13.97 (hrs, 1H), ESIMS found for C25H24FN50 m/z 430.0 (M+H).
[0544[ 5 -(5 -(Pipe1idinylmethyl)pyridin-3 -yl)-N-(tetrahydro-2H-pyranyl)-
1H-indazolecarboxamide 163.
[0545[ Tan amorphous solid (88 mg, 0.21 mmol, 88% yield). 1H NMR (DMSO-
d6) 5 ppm 1.39-1.40 (m, 2H), .53 (m, 4H), 1.69-1.76 (m, 4H), 2.37-2.38 (m, 4H), 3.39-
3.42 (m, 2H), 3.56 (s, 2H), 3.88-3.90 (m, 2H), 4.05-4.10 (m, 1H), 7.74 (d, J=9Hz, 1H), 7.77-
7.79 (m, 1H), 7.95-7.96 (m, 1H), 8.37 (d, J=8Hz, 1H), 8.41-8.42 (m, 1H), 8.47 (d, J=2Hz, 1H),
8.79 (d, J=2Hz, 1H), 13.72 (s, 1H), ESIMS found for C24H29N502 m/z 420 (M+H).
[0546[ N—(5 -Fluoropy1idin-3 -yl)-5 -(5 -(pipe1idinylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 168.
[0547[ White solid (286 mg, 0.66 mmol, 56% yield). 1H NMR (DMSO-ds) 5 ppm
1.39 (m, 2H), 1.49-1.53 (m, 4H), 2.38 (brs, 4H), 3.56 (s, 2H), 7.81-7.86 (m, 2H), 7.99 (s, 1H),
.34 (m, 2H), 8.47 (s, 1H), 8.49 (d, J=1.3 Hz, 1H), 8.82 (d, z, 1H), 8.99 (s, 1H),
.97 (s, 1H), 14.07 (hrs, 1H), ESIMS found for C24H23FN60 m/z 431.4 (M+H).
[0548[ N—(6-(4-Hydroxypiperidinyl)pyridin-3 -yl)-5 -(5 -(pipe1idin
yl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 169.
[0549[ Off-white solid (33 mg, 0.06 mmol, 53.8% yield). 1H NMR (DMSO-ds) 5
ppm 1.32-1.43 (m, 4H), 1.45-1.57 (m, 4H), 1.74-1.83 (m, 2H), 2.33-2.44 (m, 4H), 3.04 (t,
J=10Hz, 2H), 3.56 (s, 2H), 3.63-3.73 (m, 1H), 3.93-4.02 (m, 2H), 4.72 (s, 1H), 6.85 (d, J=9Hz,
1H), 7.80 (ABq, J=10Hz, 2H), 7.99 (d, J=7Hz, 2H), 8.47 (d, J=10Hz, 2H), 8.54 (s, 1H), 8.81
(s, 1H), 10.28 (s, 1H), 13.87 (s, 1H), ESIMS found for C29H33N702 m/z 512.3 (M+H).
WO 75858
[0550[ 5 -(5 -((4-Hydroxypipeiidinyl)methyl)py1idin-3 -yl)-N-(6-(pyrrolidin
yl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 170.
[0551[ Off-white solid (125.4 mg, 0.25 mmol, 73.2% yield). 1H NMR (DMSO-
d6) 5 ppm 1.93-1.96 (m, 4H), 2.09-2.12 (m, 2H), .72 (m, 2H), 3.37-3.39 (m, 4H), 3.46-
3.47 (m, 1H), 3.58 (s, 1H), 4.52 (d, J=4Hz, 1H), 6.46 d, J=9Hz, 1H), 7.77-7.82 (m, 2H), 7.95-
7.98 (m, 2H), 8.44-8.48 (m, 2H), 8.49 (d, J=2.5Hz, 1H), 8.80 (d, J=2.1Hz, 1H), 10.20 (s, 1H),
13.85 (s, 1H); ESIMS found for C28H31N702 m/z 498 (M+H).
[0552[ N-(5-Methyl(pyrrolidinyl)py1idinyl)(5-(pipeIidin
ylmethyl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 172.
[0553[ Off-white solid (186 mg, 0.38 mmol, 72.2% yield). 1H NMR (DMSO-dg)
ppm 1.34-1.43 (m, 2H), 1.47-1.55 (m, 4H), 1.82-1.89 (m, 4H), 2.30 s, 3H), .42 (m, 4H),
3.43 (t, J=6.6Hz, 4H), 3.56 (s, 2H), 7.81 (ABq, J=10Hz, 2H), 7.89 (d, J=2Hz, 1H), 7.98 (s, 1H),
8.38 (d, J=2Hz, 1H), 8.47 (d, J=8Hz, 2H), 8.81 (d, J=2Hz, 1H), 10.24 (s, 1H), 13.86 (s, 1H);
ESIMS found for C29H33N7O m/z 496.4 (M+H).
[0554[ N—(6-(Azetidinyl)methylpy1idinyl)(5-(pipe1idin
ylmethyl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 173.
[0555[ ite solid (184 mg, 0.38 mmol, 62.6% yield). 1H NMR (DMSO-dg)
ppm 1.35-1.43 (m, 2H), 1.47-1.54 (m, 4H), 2.16 (s, 3H), 2.22 (quin, J=7Hz, 2H), 2.34-2.42
(m, 4H), 3.56 (s, 2H), 4.00 (t, J=7Hz, 4H), 7.81 (ABq, J=10Hz, 2H), 7.85 (d, J=2Hz, 1H), 8.39
(d,J=2Hz, 1H), 8.47 (d,J=10Hz, 2H), 8.81 (d,J=2Hz, 1H), 10.24 (s, 1H), 13.87 (s, 1H), ESIMS
found for C28H31N7O m/z 482.0 (M+H).
[0556[ N—(6-(Azetidinyl)pyridin-3 -yl)-5 -(5 -(piperidinylmethyl)py1idin-3 -
-indazolecarboxamide 174.
[0557[ White solid (14.9 mg, 0.03 mmol, 11.0% yield). 1H NMR (DMSO-ds) 5
ppm 1.36-1.43 (m, 2H), 1.47-1.54 (m, 4H), 2.32 (quin, J=7Hz, 2H), 2.35-2.42 (m, 4H), 3.56 (s,
2H), 3.92 (t, J=7Hz, 4H), 6.39 (d, J=9Hz, 1H), 7.77-7.83 (m, 2H), 7.98 (dd, J=9Hz, J=2Hz,
2H), 8.42-8.53 (m, 3H), 8.78-8.84 (m, 1H), 10.27 (s, 1H), 13.87 (s, 1H); ESIMS found for
C27H29N7O m/z 468.0 (M+H).
[0558[ N-(6-Methoxypyridin-3 -yl)-5 -(5 1idinylmethyl)pyridin-3 H-
indazolecarboxamide 175.
[0559[ White solid (31.2 mg, 0.07 mmol, 25.8% yield). 1H NMR (DMSO-ds) 5
ppm 1.36-1.43 (m, 2H), 1.47-1.55 (m, 4H), 2.33-2.42 (m, 4H), 3.56 (s, 2H), 3.85 (s, 3H), 6.84
(d, J=9Hz, 1H), 7.81 (ABq, J=12Hz, 2H), 7.98 (s, 1H), 8.18 (dd, J=9Hz, J=2.7Hz, 1H), 8.47
(dd, J=10Hz, J=1Hz, 2H), 8.65 (d, J=2.6Hz, 1H), 8.81 (d, J=2Hz, 1H), 10.50 (s, 1H), 13.91
(hrs, 1H), ESIMS found for C25H26N602 m/z 443.4 (M+H).
[0560[ N—(2-Aminopyiimidin-5 -yl)-5 -(5 -(pipe1idinylmethyl)pyridin-3 -yl) -
1H-indazolecarboxamide 176.
[0561[ Yellow solid (412 mg, 0.96 mmol, 52.5% . 1H NMR dG) 5
ppm 1.37-1.43 (m, 2H), 1.47-1.54 (m, 4H), 2.35-2.41 (m, 4H), 3.56 (s, 2H), 6.49 (s, 2H), 7.81
(ABq, J=10Hz, 2H), 7.98 (s, 1H), 8.47 (dd, , J=2Hz, 2H), 8.63 (s, 1H), 8.81 (d, J=2Hz,
1H), 10.32 (s, 1H), 13.91 (s, 1H), ESIMS found for C23H24N80 m/Z 429.3 (M+H).
[0562[ N-(6-(Piperazinyl)py1idin-3 -yl)-5 -(5 -(pipe1idin- 1-ylmethyl)py1idin-3 -
yl)-1H-indazolecarboxamide 177.
[0563[ Tan solid (160 mg, 0.32 mmol, 28.5% yield). 1H NMR (DMSO-dg) 5 ppm
1.37-1.43 (m, 2H), 1.48-1.54 (m, 4H), 2.34-2.41 (m, 4H), 2.79 (t, J=5Hz, 4H), 3.36 (t, J=5Hz,
4H), 3.56 (s, 2H), 6.82 (d, J=9Hz, 1H), 7.81 (ABq, J=10Hz, 2H), 7.98 (s, 1H), 8.02 (dd, J=9Hz,
J=2.7Hz, 1H), 8.47 (dd, J=9Hz, J=2Hz, 2H), 8.57 (d, J=2.5Hz, 1H), 8.81 (d, J=2Hz, 1H), 10.29
(s, 1H), ESIMS found for C28H32N80 m/z 497.1 (M+H).
[0564[ N-(6-Hydroxypyiidin-3 -yl)-5 -(5 -(pipe1idin- 1-ylmethyl)py1idin-3 -yl)-1H-
indazolecarboxamide 178.
[0565[ Off-white solid (78.3 mg, 0.18 mmol, 52.4% . 1H NMR (DMSO-dg)
ppm 1.36-1.43 (m, 2H), 1.48-1.54 (m, 4H), .42 (m, 4H), 3.56 (s, 2H), 6.38 (d, J=10Hz,
1H), 7.80 (ABq, J=11Hz, 2H), 7.83 (dd, J=10Hz, J=3Hz, 1H), 7.97 (s, 1H), 8.04 (d, z,
1H), 8.44 (s, 1H), 8.48 (d, J=2Hz, 1H), 8.80 (d, J=2Hz, 1H), 10.27 (s, 1H), 11.42 (hrs, 1H),
13.87 (hrs, 1H), ESIMS found for C24H24N602 m/z 429.1 (M+H).
[0566[ 5-(5-(Pipe1idinylmethyl)pyridinyl)-N-(6-(pyrrolidine
carbonyl)py1idinyl)-1H-indazolecarboxamide 179.
[0567[ Light yellow solid (61 mg, 0.12 mmol, 37.8% yield). 1H NMR (DMSO-
d6) 5 ppm 1.37-1.43 (m, 2H), 1.48-1.55 (m, 4H), 1.82-1.90 (m, 4H), 2.38 (brs, 4H), 3.17 (d,
J=5Hz, 2H), 3.51 (t, J=7Hz, 2H), 3.57 (s, 2H), 3.70 (t, J=7Hz, 2H), 7.79 (d, J=9Hz, 1H), 7.84
(Abq, J=11Hz, 2H), 8.00 (s, 1H), 8.46 (dd, J=9Hz, J=2.5Hz, 1H), 8.48 (dd, J=9Hz, J=2Hz,
2H), 8.82 (d, J=2Hz, 1H), 9.10 (d, J=2Hz, 1H), 10.91 (s, 1H), 14.05 (hrs, 1H), ESIMS found
for C29H31N702 m/z 510.6 (M+H).
[0568[ N-(6-(Cyclopentylcarbamoyl)py1idinyl)(py1idinyl)-1H-indazole-
3-carboxamide 181.
[0569[ Light yellow solid (18 mg, 0.04 mmol, 16.6% yield). 1H NMR (DMSO-
d6) 5 ppm 1.50-1.64 (m, 4H), 1.67-1.76 (m, 2H), 1.85-1.94 (m, 4H), 4.24 (quin, J=8Hz, 1H),
7.53 (dd, J=8Hz, J=5Hz, 1H), 7.84 (ABq, 2H), 8.03 (d, J=9Hz, 1H), 8.14 (d, J=8Hz, 1H), 8.45
(d, J=8Hz, 1H), 8.48 (s, 1H), 8.54 (dd, J=9Hz, J=2,5Hz, 1H), 8.60 (d, J=4Hz, 1H), 8.94 (d,
J=2Hz, 1H), 9.16 (d, J=2Hz, 1H), 10.97 (s, 1H), 14.08 (hrs, 1H), ESIMS found for C24H22N602
m/z 427.1 (M+H).
[0570[ 5 -(5 -Aminopy1idin-3 -yl)-N-(6-(pipeiidinyl)py1idin-3 H-indazole-
3-carboxamide 182.
[0571[ Off-white solid (23.4 mg, 0.06 mmol, 19.4% yield). 1H NMR (DMSO-dg)
ppm 1.51-1.63 (m, 6H), 3.47 (t, J=5Hz, 4H), 5.45 (s, 2H), 6.83 (d, J=10Hz, 1H), 7.24 (t,
J=2Hz, 1H), 7.73 (dq, J=9Hz, J=2Hz, 2H), 7.94 (d, J=2.5Hz, 1H), 8.00 (dd, J=9Hz, J=2.5Hz,
1H), 8.08 (d, J=2Hz, 1H), 8.40 (s, 1H), 8.56 (d, J=2.5Hz, 1H), 10.27 (s, 1H), 13.84 (s, 1H),
ESIMS found for C23H23N7O m/z 414.3 (M+H).
[0572[ 5 -(5 -((3 ,3 -Difluoropyrrolidinyl)methyl)py1idin-3 -yl)-N-(6-(pyrrolidin-
1-yl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 183.
[0573[ Off-white solid (307 mg, 0.61 mmol, 39.6% . 1H NMR dg)
ppm 1.95 (t, J=6.5Hz, 4H), 2.28 (tt, J=13.5Hz, J=7Hz, 2H), 2.76 (t, J=7Hz, 2H), 2.94 (t,
J=13.5Hz, 2H), 3.38 (t, J=6.5Hz, 4H), 3.77 (s, 2H), 6.46 (d, J=9Hz, 1H), 7.81 (dq, J=8.5Hz,
J=1.5Hz, 2H), 7.97 (dd, J=9Hz, J=2.5Hz, 1H), 8.03 (s, 1H), 8.48 (s, 1H), 8.49 (d, J=2.5Hz,
1H), 8.52 (s, 1H), 8.84 (d, J=2Hz, 1H), 10.23 (s, 1H), 13.87 (s, 1H), ESIMS found for
C27H27F2N7O m/z 504.0 (M+H).
[0574[ N—(6-(Cyclopentylcarbamoyl)py1idin-3 -yl)-5 -(5 -(pipe1idin
yl)py1idin-3 -yl)-1H-indazole-3 -carboxamide 184.
[0575[ White solid (3.2 mg, 0.01 mmol, 18.5% yield). 1HNMR (DMSO-ds) 5 ppm
1.36-1.43 (m, 2H), 1.43-1.64 (m, 8H), 1.64-1.76 (m, 2H), 1.82-1.93 (m, 2H), 2.38 (brs, 4H),
3.57 (s, 2H), 4.24 (quin, J=7Hz, 1H), 7.84 (ABq, , 2H), 8.00 (s, 1H), 8.03 (d, J=9Hz,
1H), 8.44 (d, J=8Hz, 1H), 8.48 (dd, J=8Hz, J=2Hz, 2H), 8.55 (dd, J=9Hz, J=2.5Hz, 1H), 8.82
(d, J=2.5Hz, 1H), 9.16 (d, J=2.5Hz, 1H), 10.98 (s, 1H), 14.06 (hrs, 1H), ESIMS found for
C30H33N702 m/z 524.5 (M+H).
[0576[ N-(6-(Methylsulfonyl)py1idin-3 -yl)-5 -(5-(pipe1idinylmethyl) pyIidin-
3-yl)-1H-indazolecarboxamide 185.
[0577[ White solid (72 mg, 0.15 mmol, 56.4% yield). 1H NMR (DMSO-ds) 5 ppm
1.36-1.43 (m, 2H), 1.48-1.55 (m, 4H), 2.39 (brs, 4H), 3.27 (s, 3H), 3.57 (s, 2H), 7.85 (s, 2H),
8.00 (s, 1H), 8.08 (d, J=8.5Hz, 1H), 8.49 (dd, J=10Hz, J=1.5Hz, 2H), 8.83 (d, J=2.5Hz, 1H),
9.26 (d, J=2.5Hz, 1H), 11.19 (s, 1H), 14.13 (hrs, 1H), ESIMS found for C25H26N603S m/z 491.1
(M+H).
if) p"
[0578[ 5 -(5 -(4-Methylpiperazinyl)pyridin-3 -yl)-N-(6-(pyrrolidin
idin-3 -yl)-1H-indazole-3 -carboxamide 186.
[0579[ Off-white solid (196 mg, 0.41 mmol, 47.8% yield). 1H NMR (DMSO-dg)
ppm 1.89-1.98 (m, 4H), 2.27 (brs, 3H), 3.25-3.42 (m, 12H), 6.45 (d, J=9Hz, 1H), 7.53 (s, 1H),
7.77 (q, J=8.5Hz, 2H), 7.96 (d, J=6.5Hz, 1H), 8.31 (d,J=5.5Hz, 2H), 8.43 (s, 1H), 8.48 (s, 1H),
.21 (s, 1H), 13.83 (s, 1H), ESIMS found for C27H30N80 m/z 483.4 (M+H).
[0580[ 5-(5-Morpholinopy1idinyl)-N-(6-(pyrrolidinyl)py1idinyl)-1H-
lecarboxamide 187.
[0581[ White solid (92 mg, 0.20 mmol, 43.5% yield). 1H NMR (DMSO-ds) 5 ppm
1.94 (t, J=6.5 Hz, 4H), 3.28 (t, J=4.5Hz, 4H), 3.38 (t, J=6.5Hz, 4H), 3.78 (t, J=4.5Hz, 4H), 6.45
(d, J=9Hz, 1H), 7.55 (s, 1H), 7.77 (dq, J=8.5Hz, J=1.5Hz, 2H), 7.96 (dd, J=9Hz, J=2.5Hz 1H),
8.33 (dd, J=6.5Hz, J=3Hz, 2H), 8.44 (s, 1H), 8.49 (d, J=2.5Hz, 1H), 10.21 (s, 1H), 13.83 (s,
1H); ESIMS found for C26H27N702 m/z 470.5 (M+H).
[0582[ 5-(5-((3,3-Difluoropyrrolidinyl)methyl)py1idinyl)-N-(py1idinyl)-
1H-indazolecarboxamide 188.
[0583[ White solid (209 mg, 0.48 mmol, 56.6% yield). 1H NMR dg) 5
ppm 2.23-2.32 (m, 2H), 2.76 (t, J=7Hz, 2H), 2.94 (t, J=13.5Hz, 2H), 3.77 (s, 2H), 7.40 (q,
J=8Hz, 1H), 7.83 (dq, J=8Hz, J=2Hz, 2H), 8.04 (s, 1H), 8.31-8.34 (m, 2H), 8.49 (s, 1H), 8.53
(d, J=2Hz, 1H), 8.85 (d, J=2.5Hz, 1H), 9.08 (d, J=2Hz, 1H), 10.70 (s, 1H), 14.01 (hrs, 1H);
ESIMS found for C23H20F2N60 m/z 435.2 (M+H).
[0584[ N-(Pyridinyl)(5-(pyrrolidinyl)py1idinyl)-1H-indazole
carboxamide 189.
[0585[ White solid (30 mg, 0.08 mmol, 26.0% yield). 1H NMR (DMSO-ds) 5 ppm
1.91-2.05 (m, 4H), 3.33-3.39 (m, 4H), 7.09 (s, 1H), 7.40 (q, J=8Hz, 1H), 7.79 (s, 2H), 7.96 (d,
J=2.5Hz, 1H), 8.14 (s, 1H), 8.30-8.34 (m, 2H), 8.44 (s, 1H), 9.07 (d,J=2Hz, 1H), 10.68 (s, 1H),
13.97 (brs, 1H), ESIMS found for C22H20N6O m/z 385.2 (M+H).
J. / \N
[0586[ 5 -(5 -((Dimethylamino)methyl)pyiidin-3 -yl)-N-(6-(pyrrolidin
yl)pyIidin-3 -yl)-1H-indazole-3 -carboxamide 190.
[0587[ White solid (142 mg, 0.32 mmol, 39.7% yield). 1H NMR (DMSO-dg) 5
ppm 1.92-1.97 (m, 4H), 2.20 (s, 6H), 3.35-3.40 (m, 4H), 3.53 (s, 2H), 6.46 (d, J=9Hz, 1H), 7.80
(dq, J=9Hz, J=1.5Hz, 2H), 7.97 (dd, J=9Hz, J=3Hz, 1H), 8.00 (s, 1H), 8.46-8.50 (m, 3H), 8.82
(d, J=2.5Hz, 1H), 10.22 (s, 1H), 13.86 (brs, 1H), ESIMS found for C25H27N7O m/z 442.4
(M+H).
[0588[ Preparation of 2-fluorophenoxy)pyridin-3 -yl)-5 -(pyIidin-3 -yl)-1H-
indazolecarboxamide (18) is depicted below in Scheme 32.
CXXXI
\ \°"'
/ /
cone U l cone l cozH
Br N/ N \ N\
\N \N NaOH, H20 \N
N/ Pd(PPh3)4, K3P04 N’ 9000, 111 N’
H20, DMF, we
0 o o
CXVH CXXXIX CXL
HATU, DIPEA
DMF, rt, overnight
F Q.
0 Q" 0 @~
/ NH / NH/
1 I
N \ N
\ \
TFA, DCM,
u’ ‘— ,
Egsm, rt, 3 h N
18 o
Scheme 32
[0589[ To a solution of methyl 5-bromo(tetrahydro-2H-pyranyl)-1H-
indazolecarboxylate (CXVII) (7.0 g, 20.6 mmol) in DMF (80 mL) and water (16 mL) was
added K3PO4 (6.56 g, 30.9 mmol), pyridinylboronic acid (CXXXI) (2.79 g, 22.7 mmol),
Pd(PPh3)4 (1.19 g, 1.03 mmol) and. The solution was purged with argon and heated at 90°C for
3 h. The on was cooled to room temperature and then concentrated under d
pressure. The residue was dissolved in DCM and washed with water, dried over MgSO4, filtered
and then evaporated under vacuum. The residue was d on a silica gel column (100%
DCM —> 15985 MeOHzDCM) to give methyl 5-(pyridinyl)(tetrahydro-2H-pyranyl)-
1H-indazolecarboxylate (CXXXIX) as an orange oil which solidified at rt (6.28 g, 18.6
mmol, 90% yield). ESIMS found for N303 m/z 338.0 (M+H).
Sfip_2
[0590[ Preparation of intermediate 5-(pyridin-3 -yl)(tetrahydro-2H-pyran
yl)-1H-indazolecarboxylic acid (CXL) was performed following the procedure listed in
Scheme 25, Step 4. White solid (900 mg, 2.78 mmol, 15% yield). ESIMS found for C18H17N303
m/Z 324.1 (M+H).
[0591[ Preparation of intermediate N-(6-(2-fluorophenoxy)pyridinyl)
(pyridin-3 -yl)(tetrahydro-2H-pyranyl)-1H-indazole-3 -carboxamide (CXLI) was
performed following the procedure listed in Scheme 28, Step 3. Off-white solid (207 mg, 0.41
mmol, 66% yield). 1H NMR (DMSO-dg) 5 ppm 1.60-1.69 (m, 2H), 1.76-1.87 (m, 1H), 2.03-
2.13 (m, 2H), 2.56-2.65 (m, 1H), 3.84 (dt, , J=4Hz, 1H), 3.99 (t, J=11Hz, 1H), 6.07 (dd,
J=10Hz, J=2Hz, 1H), 6.98 (dd, J=3Hz, J=2Hz, 1H), 7.03-7.08 (m, 2H), 7.14 (d, J=9Hz, 1H),
7.46 (t, J=7Hz, 1H), 7.61 (dd, J=8Hz, J=5Hz, 1H), 7.91 (dd, J=9Hz, J=2Hz, 1H), 8.05 (d,
J=9Hz, 1H), 8.25 (d, J=8Hz, 1H), 8.37 (dd, J=3Hz, 1H), 8.49 (s, 1H), 8.64 (dd, J=5Hz,
J=2Hz, 1H), 8.66 (d, J=3Hz, 1H), 9.00 (d, J=2Hz, 1H), 10.59 (s, 1H), ESIMS found for
C29H24FN503 m/z 509.2 (M+H).
S£p_4
[0592[ Preparation of N—(6-(2-fluorophenoxy)pyridinyl)(pyridinyl)-1H-
indazolecarboxamide (18) was performed following the procedure listed in Scheme 28, Step
4. White solid (128 mg, 0.30 mmol, 54.7% yield). 1H NMR (DMSO-dg) 5 ppm 7.16 (d, J=9Hz,
1H), 7.23-7.39 (m, 4H), 7.52 (dd, J=8Hz, J=5Hz, 1H), 7.79-7.85 (m, 2H), 8.13 (td, J=8Hz,
J=2Hz, 1H), 8.38 (dd, J=9Hz, J=3Hz, 1H), 8.46 (s, 1H), 8.56 (d, J=3Hz, 1H), 8.59 (dd, J=5Hz,
J=1Hz, 1H), 8.93 (d, J=2Hz, 1H), 10.65 (s, 1H), 13.96 (brs, 1H), ESIMS found for
C24H16FN502 m/z 426.0 (M+H).
[0593[ The ing compounds were prepared in accordance with the procedure
described in the above Example 6.
[0594[ N-(6-(3-Fluorophenoxy)pyridinyl)(pyridinyl)-1H-indazole
carboxamide 19.
[0595[ ite solid (148 mg, 0.35 mmol, 89.3% yield). 1H NMR (DMSO-dg)
ppm 6.98 (dd, J=8Hz, J=2Hz, 1H), 7.01-7.06 (m, 2H), 7.13 (d, J=9Hz, 1H), 7.44 (q, J=7Hz,
1H), 7.53 (dd, J=8Hz, J=5Hz, 1H), 7.80-7.85 (m, 2H), 8.14 (td, J=6Hz, J=2Hz, 1H), 8.40 (dd,
J=9Hz, J=3Hz, 1H), 8.47 (s, 1H), 8.60 (dd, J=5Hz, J=1Hz, 1H), 8.69 (d, J=3Hz, 1H), 8.93 (d,
J=2Hz, 1H), 10.71 (s, 1H), 13.99 (s, 1H), ESIMS found for C24H16FN502 m/z 426.0 (M+H).
[0596[ 4-Fluorophenoxy)pyridinyl)(pyridinyl)-1H-indazole
carboxamide 20.
[0597[ White solid (82 mg, 0.19 mmol, 91.8% . 1H NMR (DMSO-ds) 5 ppm
7.08 (d, J=9Hz, 1H), 7.15-7.21 (m, 2H), 7.22-7.27 (m, 2H), 7.67 (dd, J=8Hz, J=5Hz, 1H), 7.81-
7.88 (m, 2H), 8.31 (d, J=8Hz, 1H), 8.36 (dd, J=9Hz, J=3Hz, 1H), 8.51 (s, 1H), 8.63 (d, J=3Hz,
1H), 8.66 (dd, J=5Hz, J=1Hz, 1H), 9.02 (d, 2Hz, 1H), 10.67 (s, 1H), 14.00 (s, 1H), ESIMS
found for C24H16FN502 m/z 426.0 (M+H).
Example 7
[0598[ Preparation of N—(6-carbamoylpyridinyl)-5 -(5-(piperidin
ylmethyl)pyridinyl)-1H-indazolecarboxamide (180) is depicted below in Scheme 33.
H2504, HOAc
85"C, 20 min
Scheme 33
[0599[ To a solution of N—(6-cyanopyridin-3 -yl)-5 -(5 -(piperidin
ylmethyl)pyridinyl)-1H-indazolecarboxamide (62) (200 mg, 0.45 mmol) in glacial acetic
acid (2 mL) heated at 85°C was carefiilly added dropwise sulfimc acid (2 mL). The reaction
was heated at 85°C for r 20 minutes before pouring into ice. The solution was basified
with cold 5N NH4OH. The solids formed were filtered, washed with cold washed and dried
under vacuum. The dry solid was suspended in DCM and a few drops of MeOH were added.
The insoluble solids were filtered and discarded. The e was concentrated and suspended
again in DCM, boiled for 15 minutes and filtered. The solid was dried under vacuum to give
N—(6-carbamoylpyridinyl)(5-(piperidinylmethyl)pyridinyl)-1H-indazole
carboxamide (180) as a white solid (192 mg, 0.42 mmol, 93.7% yield). 1H NMR (DMSO-ds) 5
ppm 1.36-1.42 (m, 2H), 1.48-1.55 (m, 4H), 2.38 (brs, 4H), 3.56 (s, 2H), 7.49 (s, 1H), 7.65 (d,
J=9Hz, 1H), 7.80 (d, J=9Hz, 1H), 7.97 (s, 1H), 8.03 (s, 2H), 8.41 (s, 1H), 8.45 (d, J=2Hz, 1H),
8.54 (dd, J=9Hz, z, 1H), 8.80 (d, J=2Hz, 1H), 9.15 (d, J=2Hz, 1H), 10.83 (brs, 1H),
ESIMS found for C25H25N702 m/z 456.4 (M+H).
Administration and Pharmaceutical Compositions
[0600[ Some ments include administration of the compounds described
herein as pharmaceutical compositions comprising: (a) a safe and therapeutically effective
amount of the indazolecarboxamide, or its corresponding enantiomer, diastereoisomer or
tautomer, or pharmaceutically acceptable salt, and (b) a pharmaceutically acceptable carrier.
[0601[ In some embodiments, the methods bed herein fithher include
administering the compounds of this invention in combination (administered together or
sequentially) with other known agents.
[0602[ Administration ofthe compounds disclosed herein or the pharmaceutically
acceptable salts thereof can be via any of the accepted modes of stration for agents that
serve similar utilities including, but not limited to, orally, subcutaneously, intravenously,
intranasally, topically, transdermally, eritoneally, intramuscularly, intrapulmonarilly,
vaginally, rectally, ontologically, neuro-otologically, intraocularly, subconjuctivally, via
anterior eye chamber ion, intravitreally, intraperitoneally, intrathecally, intracystically,
intrapleurally, via wound irrigation, intrabuccally, intra-abdominally, intra-articularly, intraaurally
, intrabronchially, intracapsularly, intrameningeally, via inhalation, via endotracheal or
endobronchial instillation, via direct instillation into pulmonary cavities, intraspinally,
intrasynovially, intrathoracically, via ostomy tion, epidurally, intratympanically,
intracistemally, intravascularly, entricularly, intraosseously, via irrigation of infected
bone, or via application as part of any admixture with a prosthetic devices. Oral and parenteral
administrations are customary in treating the tions.
[0603[ Compounds of the invention intended for pharmaceutical use may be
administered as lline or amorphous products. Pharmaceutically acceptable compositions
may include solid, olid, liquid, solutions, dal, liposomes, emulsions, suspensions,
complexes, coacervates and aerosols. Dosage forms, such as, e.g., tablets, capsules, powders,
liquids, suspensions, suppositories, aerosols, implants, controlled release or the like. They may
be obtained, for e, as solid plugs, powders, or films by methods such as precipitation,
crystallization, milling, grinding, supercritical fluid processing, coacervation, complex
coacervation, encapsulation, emulsification, complexation, freeze drying, spray drying, or
evaporative drying. Microwave or radio frequency drying may be used for this purpose. The
compounds can also be administered in sustained or lled release dosage forms, including
depot injections, osmotic pumps, pills (tablets and or es), transdermal (including
electrotransport) patches, implants and the like, for prolonged and/or timed, pulsed
administration at a predetermined rate.
[0604[ The compounds can be administered either alone or more typically in
combination with a conventional pharmaceutical carrier, excipient or the like. The term
"excipient" is used herein to describe any ingredient other than the compound(s) of the
invention. Pharmaceutically acceptable ents include, but are not limited to, ion
exchangers, alumina, aluminum stearate, lecithin, self-emulsifying drug delivery systems
(SEDDS) such as ocopherol polyethylene glycol 1000 succinate, tants used in
pharmaceutical dosage forms such as Tweens, poloxamers or other similar polymeric delivery
matrices, serum proteins, such as human serum albumin, buffer substances such as phosphates,
tris, glycine, sorbic acid, potassium sorbate, l glyceride mixtures of saturated vegetable
fatty acids, water, salts or electrolytes, such as protamine sulfate, disodium hydrogen
ate, potassium hydrogen phosphate, sodium-chloride, zinc salts, colloidal silica,
magnesium trisilicate, polyvinyl pyrrolidone, cellulose-based substances, hylene glycol,
sodium carboxymethyl cellulose, polyacrylates, waxes, polyethylene-polyoxypropylene-block
polymers, and wool fat. Cyclodextrins such as (x-, [3, and y-cyclodextrin, or chemically modified
derivatives such as yalkylcyclodextrins, including 2- and 3-hydroxypropyl-b-
cyclodextrins, or other solubilized derivatives can also be advantageously used to enhance
ry of compounds of the formulae described herein. Dosage forms or compositions
containing a compound as described herein in the range of 0.005% to 100% with the balance
made up from non-toxic r may be prepared. The contemplated compositions may contain
0.001%-100% active ingredient, in one embodiment 01-95%, in r embodiment 75-85%,
in a fithher embodiment , Actual methods of preparing such dosage forms are known,
or will be apparent, to those skilled in this art, for example, see Remington: The Science and
Practice ofPharmacy, 21st Edition (Lippincott Williams & Wilkins. 2005).
[0605[ In one red embodiment, the compositions will take the form of a unit
dosage form such as a pill or tablet and thus the composition may contain, along with the active
ingredient, a diluent such as lactose, sucrose, dicalcium phosphate, or the like, a lubricant such
as magnesium te or the like, and a binder such as starch, gum acacia, polyvinylpyrrolidine,
gelatin, cellulose, cellulose derivatives or the like. In another solid dosage form, a ,
marume, solution or sion (e. g. , in propylene ate, vegetable oils, PEG’s, poloxamer
124 or triglycerides) is encapsulated in a capsule (gelatin or cellulose base capsule). Unit dosage
forms in which the two active ingredients are physically separated are also contemplated, e. g.,
capsules with granules (or tablets in a capsule) of each drug, two-layer tablets, two-
tment gel caps, etc. Enteric coated or delayed release oral dosage forms are also
contemplated.
[0606[ Liquid pharmaceutically administrable compositions can, for example, be
prepared by dissolving, dispersing, etc. an active compound as defined above and optional
pharmaceutical adjuvants in a carrier (e.g., water, saline, aqueous se, glycerol, glycols,
ethanol or the like) to form a solution, colloid, liposome, emulsion, complexes, coacervate or
suspension. If desired, the pharmaceutical composition can also contain minor amounts of
nontoxic auxiliary substances such as wetting agents, emulsifying agents, co-solvents,
solubilizing , pH buffering agents and the like (6. g. , sodium e, sodium citrate,
cyclodextrin derivatives, sorbitan monolaurate, triethanolamine acetate, triethanolamine oleate,
and the like).
[0607 [ In some ments, the unit dosage ofcompounds ula (I) is 0.25
mg/Kg to 50 mg/Kg in humans.
[0608[ In some embodiments, the unit dosage ofcompounds ofFormula (I) is 0.25
mg/Kg to 20 mg/Kg in humans.
[0609[ In some embodiments, the unit dosage ofcompounds ofFormula (I) is 0.50
mg/Kg to 19 mg/Kg in humans.
[0610[ In some embodiments, the unit dosage ofcompounds ofFormula (I) is 0.75
mg/Kg to 18 mg/Kg in humans.
[0611[ In some ments, the unit dosage of nds of Formula (I) is 1.0
mg/Kg to 17 mg/Kg in humans.
[0612[ In some embodiments, the unit dosage ofcompounds ula (I) is 1.25
mg/Kg to 16 mg/Kg in .
[0613[ In some embodiments, the unit dosage ofcompounds ofFormula (I) is 1.50
mg/Kg to 15 mg/Kg in humans.
[0614[ In some embodiments, the unit dosage ofcompounds ofFormula (I) is 1.75
mg/Kg to 14 mg/Kg in humans.
[0615[ In some embodiments, the unit dosage of compounds of Formula (I) is 2.0
mg/Kg to 13 mg/Kg in humans.
[0616[ In some embodiments, the unit dosage of compounds of Formula (I) is 3.0
mg/Kg to 12 mg/Kg in humans.
[0617[ In some embodiments, the unit dosage of compounds of Formula (I) is 4.0
mg/Kg to 11 mg/Kg in humans.
[0618[ In some embodiments, the unit dosage of compounds of Formula (I) is 5.0
mg/Kg to 10 mg/Kg in humans.
[0619[ In some embodiments, the compositions are provided in unit dosage forms
suitable for single administration of a precise dose.
[0620[ In some embodiments, the itions are provided in unit dosage forms
suitable for twice a day administration of a precise dose.
[0621[ In some ments, the compositions are provided in unit dosage forms
suitable for three times a day administration of a precise dose.
[0622[ Injectables can be prepared in conventional forms, either as liquid
solutions, colloid, liposomes, complexes, coacervate or suspensions, as emulsions, or in solid
forms suitable for reconstitution in liquid prior to injection. The tage of active compound
contained in such parenteral compositions is highly dependent on the specific nature thereof,
as well as the activity of the compound and the needs of the subject. However, percentages of
active ingredient of 0.01% to 10% in solution are employable, and could be higher if the
ition is a solid or suspension, which could be subsequently diluted to the above
percentages.
[0623[ In some ments, the injection can be an intra-tendon inj ection.
[0624[ In some embodiments, the composition will se 01-10% of the
active agent in solution.
[0625[ In some embodiments, the composition will comprise 0. 1-5% ofthe active
agent in solution.
[0626[ In some embodiments, the composition will comprise 0. 1-4% ofthe active
agent in solution.
[0627[ In some embodiments, the composition will se 0.15-3% of the
active agent in solution.
[0628[ In some embodiments, the composition will comprise 0.2-2% ofthe active
agent in solution.
[0629[ In some embodiments, the compositions are provided in dosage forms
suitable for continuous dosage by intravenous ll’lfilSlOI’l over a period of 1-96 hours.
[0630[ In some embodiments, the compositions are ed in dosage forms
suitable for continuous dosage by intravenous ll’lfilSlOI’l over a period of l-72 hours.
[0631[ In some embodiments, the compositions are provided in dosage forms
suitable for continuous dosage by intravenous ll’lfilSlOI’l over a period of 1-48 hours.
[0632[ In some embodiments, the compositions are provided in dosage forms
suitable for continuous dosage by intravenous SlOI’l over a period of 1-24 hours.
[0633[ In some embodiments, the compositions are provided in dosage forms
le for continuous dosage by intravenous ll’lfilSlOI’l over a period of l-12 hours.
[0634[ In some embodiments, the compositions are provided in dosage forms
suitable for continuous dosage by intravenous ll’lfilSlOI’l over a period of 1-6 hours.
[0635[ In some embodiments, these compositions can be administered by
intravenous ll’lfilSlOI’l to humans at doses of 5 mg/m2 to 300 mg/mz.
[0636[ In some embodiments, these compositions can be administered by
intravenous ll’lfilSlOI’l to humans at doses of 5 mg/m2 to 200 mg/mz.
[0637[ In some embodiments, these compositions can be administered by
enous ll’lfilSlOl’l to humans at doses of 5 mg/m2 to 100 mg/mz.
[0638[ In some ments, these itions can be administered by
intravenous ll’lfilSlOl’l to humans at doses of 10 mg/m2 to 50 mg/m2.
[0639[ In some embodiments, these compositions can be administered by
intravenous ll’lfilSlOl’l to humans at doses of 50 mg/m2 to 200 mg/mz.
[0640[ In some embodiments, these compositions can be administered by
intravenous ll’lfilSlOl’l to humans at doses of 75 mg/m2 to 175 mg/mz.
[0641[ In some embodiments, these compositions can be administered by
intravenous ll’lfilSlOl’l to humans at doses of 100 mg/m2 to 150 mg/mz.
[0642[ In one preferred embodiment, the compositions can be administered to the
respiratory tract (including nasal and pulmonary) e.g., h a nebulizer, metered-dose
inhalers, atomizer, mister, aerosol, dry powder inhaler, insufflator, liquid instillation or other
suitable device or technique.
[0643[ In some embodiments, aerosols intended for delivery to the nasal mucosa
are provided for inhalation through the nose. For optimal delivery to the nasal cavities, inhaled
particle sizes of about 5 to about 100 microns are useful, with particle sizes of about 10 to about
60 microns being red. For nasal ry, a larger inhaled particle size is d to
maximize ion on the nasal mucosa and to minimize or prevent pulmonary deposition of
the administered formulation. In some embodiments, aerosols intended for delivery to the lung
are provided for inhalation through the nose or the mouth. For optimal delivery to the lung,
inhaled namic particle sizes of equal or less than 10 um are USCfill, with an aerodynamic
particle size of about 0.1 to 10 microns being preferred. Inhaled particles may be defined as
liquid droplets containing dissolved drug, liquid droplets containing suspended drug particles
(in cases where the drug is insoluble in the suspending medium), dry particles of pure drug
substance, drug substance incorporated with excipients, liposomes, emulsions, colloidal
systems, coacervates, aggregates of drug nanoparticles, or dry particles of a t which
contain embedded drug nanoparticles.
[0644[ In some embodiments, compounds of Formula (I) disclosed herein
intended for respiratory delivery (either ic or local) can be administered as aqueous
formulations, as non-aqueous solutions or suspensions, as suspensions or ons in
halogenated hydrocarbon propellants with or without alcohol, as a colloidal system, as
emulsions, coacervates or as dry powders. Aqueous formulations may be aerosolized by liquid
nebulizers employing either hydraulic or ultrasonic atomization or by modified micropump
systems (like the soft mist inhalers, the Aerodose® or the AERX® systems). Propellant-based
s may use suitable pressurized d-dose inhalers (pMDIs). Dry powders may use
dry powder r s (DPIs), which are e of dispersing the drug substance
effectively. A desired particle size and distribution may be obtained by choosing an appropriate
device.
[0645[ In some embodiments, the compositions of Formula (I) disclosed herein
can be administered to the ear by s methods. For example, a round window catheter (e.g.,
US. Pat. Nos. 6,440,102 and 6,648,873) can be used.
[0646[ Alternatively, formulations can be incorporated into a wick for use
between the outer and middle ear (e.g., US. Pat. No. 6,120,484) or absorbed to collagen sponge
or other solid support (e.g., US. Pat. No. 4,164,559).
[0647[ If desired, formulations of the invention can be incorporated into a gel
formulation (e.g., US. Pat. Nos. 4,474,752 and 6,911,211).
[0648[ In some embodiments, compounds of a (I) disclosed herein
intended for delivery to the ear can be stered via an implanted pump and delivery system
through a needle directly into the middle or inner ear (cochlea) or h a cochlear implant
stylet electrode channel or alternative prepared drug delivery channel such as but not limited to
a needle through al bone into the a.
[0649[ Other options include delivery via a pump through a thin film coated onto
a multichannel electrode or electrode with a specially imbedded drug delivery channel
(pathways) carved into the thin film for this purpose. In other embodiments the acidic or basic
solid gacyclidine can be delivered from the oir of an external or internal implanted
pumping system.
[0650[ Formulations of the ion also can be administered to the ear by
intratympanic ion into the middle ear, inner ear, or cochlea (e.g., US. Pat. No. 6,377,849
and Ser. No. 11/337,815).
[0651[ Intratympanic injection of therapeutic agents is the technique of injecting
a therapeutic agent behind the ic membrane into the middle and/or inner ear. In one
embodiment, the formulations described herein are administered ly onto the round
window membrane via transtympanic injection. In another ment, the ion channel
modulating agent auris-acceptable formulations described herein are administered onto the
round window membrane via a non-transtympanic approach to the inner ear. In additional
embodiments, the formulation bed herein is administered onto the round window
membrane via a surgical approach to the round window membrane comprising modification of
the crista fenestrae cochleae.
[0652[ In some embodiments, the compounds of Formula (I) are formulated in
rectal compositions such as enemas, rectal gels, rectal foams, rectal aerosols, suppositories,
jelly suppositories, or retention enemas, containing conventional suppository bases such as
cocoa butter or other glycerides, as well as synthetic polymers such as polyvinylpyrrolidone,
PEG (like PEG ointments), and the like. In suppository forms of the compositions, a low-
WO 75858
melting wax such as, but not limited to, a mixture of fatty acid ides, optionally in
combination with cocoa butter is first melted.
[0653[ Suppositories for rectal administration of the drug r as a solution,
colloid, suspension or a complex) can be prepared by mixing the drug with a suitable non-
ting excipient that is solid at ordinary temperatures but liquid at the rectal temperature and
will therefore melt or erode/dissolve in the rectum and release the drug. Such materials include
cocoa butter, inated gelatin, hydrogenated vegetable oils, poloxamers, mixtures of
polyethylene glycols of various molecular weights and fatty acid esters of hylene glycol.
[0654[ In some embodiments, the compositions can be stered by
transdermal patch.
[0655[ Other modes of deliveries include using biodegradable or non-
biodegradable scaffolds.
[0656[ It is to be noted that concentrations and dosage values may also vary with
the severity ofthe condition to be alleviated. It is to be further understood that for any particular
patient, specific dosage regimens should be ed over time according to the individual need
and the professional judgment of the person administering or supervising the administration of
the compositions, and that the concentration ranges set forth herein are exemplary only and are
not intended to limit the scope or practice of the claimed compositions.
[0657[ Solid compositions can be provided in various different types of dosage
forms, depending on the physicochemical properties of the drug, the desired dissolution rate,
cost considerations, and other criteria. In one of the embodiments, the solid composition is a
single unit. This implies that one-unit dose of the drug is comprised in a single, physically
shaped solid form or article. In other words, the solid composition is coherent, which is in
contrast to a multiple unit dosage form, in which the units are incoherent.
[0658[ Examples of single units which may be used as dosage forms for the solid
composition include tablets, such as compressed tablets, film-like units, ike units, wafers,
lyophilized matrix units, and the like. In a red embodiment, the solid composition is a
highly porous lyophilized form. Such lyophilizates, sometimes also called wafers or lyophilized
tablets, are particularly usefiil for their rapid disintegration, which also enables the rapid
dissolution ofthe active compound.
[0659[ On the other hand, for some applications the solid composition may also
be formed as a multiple unit dosage form as defined above. es of multiple units are
powders, granules, microparticles, pellets, mini-tablets, beads, lyophilized powders, and the
like. In one embodiment, the solid ition is a lyophilized powder. Such a dispersed
lyophilized system ses a multitude of powder particles, and due to the lyophilization
process used in the formation of the powder, each particle has an irregular, porous
microstructure through which the powder is capable of ing water very rapidly, resulting
in quick dissolution. Effervescent compositions are also contemplated to aid the quick
dispersion and absorption of the compound.
[0660[ Another type of multiparticulate system which is also capable of achieving
rapid drug dissolution is that of powders, granules, or pellets from water-soluble excipients
which are coated with the drug, so that the drug is located at the outer surface of the dual
particles. In this type of system, the water-soluble low molecular weight excipient is useful for
preparing the cores of such coated particles, which can be subsequently coated with a coating
composition comprising the drug and, preferably, one or more onal excipients, such as a
binder, a pore former, a saccharide, a sugar alcohol, a film-forming polymer, a plasticizer, or
other ents used in ceutical coating compositions.
[0661[ Also ed herein are kits. Typically, a kit includes one or more
nds or compositions as described herein. In certain embodiments, a kit can include one
or more delivery systems, e.g., for delivering or administering a compound as provided above,
and directions for use ofthe kit (e.g., instructions for treating a patient). In another embodiment,
the kit can e a compound or composition as described herein and a label that indicates
that the contents are to be administered to a patient with cancer. In another embodiment, the kit
can include a compound or composition as described herein and a label that indicates that the
contents are to be stered to a patient with one or more diseases or ions
independently selected from the group consisting of a tendinopathy, dermatitis, psoriasis,
morphea, ichthyosis, Raynaud's syndrome, and Darier's disease, and/or for promoting wound
healing.
[0662[ The actual dose of the active compounds of the present invention depends
on the specific compound, and on the condition to be treated, the selection of the appropriate
dose is well within the dge of the skilled artisan.
Methods of Treatment
[0663[ The compounds and compositions provided herein can be used as
inhibitors and/or modulators of one or more components of the Wnt y, which may
include one or more Wnt proteins, and thus can be used to treat a variety of disorders and
diseases in which aberrant Wnt signaling is implicated. Non-limiting examples include one or
more diseases or conditions independently selected from the group consisting of a
tendinopathy, dermatitis, psoriasis, morphea, ichthyosis, Raynaud's syndrome, and Darier's
disease. In n embodiments, the compounds and compositions ed herein can be used
for promoting wound healing.
[0664[ In some embodiments, the methods r include administering to a
patient in need of such treatment an ive amount of one or more of the compounds of
Formula (I), in combination (simultaneously or sequentially) with at least one other agent.
[0665[ In some ments, the methods further include administering a
pharmaceutical composition that includes a therapeutically effective amount of a compound of
Formula (I), or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable
excipient and ally at least one other agent.
[0666[ In some embodiments, the one or more diseases or conditions is a
tendinopathy. In certain embodiments, the tendinopathy is tendinosis. In certain embodiments,
the tendinopathy is tendinitis. In certain ments, the tendinopathy is tenosynovitis.
[0667[ A tendon is a band of fibrous connective tissue that usually connects
muscle to bone. Healthy tendons include el arrays oftype I collagen fibers closely packed
er, but also include a small amount of elastin and of proteoglycans. Tendons can be slow
to heal if injured, and sometimes do not regain their original th. Partial tears heal by the
rapid production of disorganized II collagen, which is weaker than normal tendon.
Recurrence of injury in the d region of tendon is common.
[0668[ Tendons which may be treated by the methods ofthe invention include any
tendon of the human or mammalian body. Non-limiting examples of tendons include the
patellar tendon, the anterior tibialis tendon, the Achilles , the hamstring tendon, the
semitendinosus tendon, the gracilis tendon, the abductor tendon, the adductor tendon, the
pinatus tendon, the infraspinatus tendon, the pularis tendon, the teres minor
tendon, the flexor tendon, the rectus femoris tendon, the tibialis posterior tendon, and the
quadriceps femoris tendon.
[0669[ In some embodiments, the tendon is a tendon ofthe foot or ankle, e.g., the
extensor hallucis longus, the flexor hallucis longus, the extensor digitorum longus, the or
digitorum brevis, the peroneus longus, the peroneus brevis, the flexor hallucis brevis, the flexor
digitorum longus, the posterior tibialis, the Achilles tendon, and the plantar fascia.
[0670[ In some embodiments, the tendon is a tendon of the leg, e.g., the patellar
tendon, the anterior tibialis tendon, the Achilles tendon, the hamstring tendon, the
semitendinosus tendon, the gracilis tendon, the abductor , the adductor tendon, the flexor
tendon, the rectus femoris tendon, the tibialis ior tendon, and the ceps femoris
tendon.
[0671[ In some embodiments, the tendon is a tendon of the er, e.g., the
supraspinatus tendon, the pinatus tendon, the subscapularis tendon, and the teres minor
tendon (rotator cuff complex).
[0672[ In some embodiments, the tendon is a tendon ofthe elbow, e.g., the biceps
tendon, the triceps tendon, the extensor carpi radialis brevis, the common extensor tendon, the
extensor rum, the extensor digiti minimi, the extensor carpi ulnaris, the supinator, the
common flexor tendon, the pronator teres, the flexor carpi radialis, the palmaris longus, the
flexor carpi ulnaris and the digitorum superficialis. In some embodiments, the tendon is a
tendon of the wrist. In some embodiments, the tendon of the wrist is selected from the group
ting of biceps tendon, the triceps tendon, the extensor carpi radialis breVis, the common
or , the extensor digitorum, the or digiti minimi, the extensor carpi ulnaris,
the supinator, the common flexor tendon, the pronator teres, the flexor carpi radialis, the
is longus, the flexor carpi ulnaris, the digitorum superficialis, the flexor pollicis breVis,
the flexor pollicis longus, the abductor pollicis breVis, the abductor pollicis longus, the flexor
digitorum profiindus, the flexor digitorum superficialis, the extensor pollicis breVis, and the
extensor pollicis longus. In some embodiments, the tendon is a tendon of the hand. In some
embodiments, the tendon ofthe hand is selected from the group consisting ofthe flexor pollicis
breVis, the flexor pollicis longus, the abductor pollicis breVis, the abductor pollicis longus, the
flexor digitorum profiJndus, the flexor digitorum superficialis, the extensor pollicis breVis, and
the extensor is longus.
[0673[ Non-limiting examples of tendinopathies include: claVicular or patellar
tendinopathy, patellar tendonitis, medial tibial stress syndrome, Achilles tendinopathy, lateral
epicondylitis or s elbow," medial epicondylitis or "golfer's elbow," plantar fasciitis, and
r cuff tendinopathy.
[0674[ In some embodiments, the tendinopathy is rotator cuff tendinopathy, e.g.,
supraspinatus tendinopathy, infraspinatus tendinopathy, subscapularis tendinopathy, and teres
minor tendinopathy.
[0675[ In some embodiments, the tendinopathy is lateral epicondylitis or "tennis
elbow" at the extensor muscle group origin at the lateral humeral condyle insertion, principally
in the extensor carpi radialis breVis (ECRB) tendon. In some embodiments, the tendinopathy is
medial epicondylitis or r's elbow" at the interface between the or teres and flexor
carpi radialis origin of the medial humeral condyle.
[0676[ In some embodiments, the tendinopathy is ar tendinopathy. In some
embodiments, the opathy is es opathy. In some embodiments, the
tendinopathy is plantar fasciitis. In some embodiments, the opathy is medial plantar
fasciitis. In some embodiments, the tendinopathy is lateral plantar fasciitis.
[0677[ In some embodiments, the tendinopathy is tendinosis. In some
embodiments, the tendinosis is selected from the group consisting of extensor hallucis longus
tendinosis, flexor hallucis longus tendinosis, extensor digitorum longus tendinosis, extensor
digitorum breVis tendinosis, peroneus longus tendinosis, us breVis tendinosis, flexor
hallucis breVis osis, flexor digitorum longus tendinosis, posterior tibialis tendinosis,
Achilles tendon tendinosis, and plantar fascia tendinosis. In some embodiments, the tendinosis
is selected from the group consisting of patellar osis, the anterior tibialis tendinosis, the
hamstring tendinosis, semitendinosus osis, gracilis tendinosis, abductor tendinosis, and
adductor tendinosis. In some embodiments, the tendinosis is selected from the group consisting
of flexor tendinosis, rectus femoris tendinosis, tibialis posterior tendinosis, and quadriceps
femoris tendinosis. In some embodiments, the tendinosis is selected from the group ting
of pinatus tendinosis, pinatus osis, subscapularis tendinosis, and teres minor
tendinosis.
[0678[ In some embodiments, the tendinosis is selected from the group ting
of biceps tendinosis, triceps tendinosis, extensor carpi radialis breVis tendinosis, common
extensor tendinosis, extensor digitorum tendinosis, extensor digiti minimi tendinosis, extensor
carpi ulnaris tendinosis, supinator tendinosis, common flexor tendinosis, pronator teres
osis, flexor carpi radialis tendinosis, palmaris longus tendinosis, flexor carpi ulnaris
tendinosis and digitorum cialis tendinosis. In some ments, the tendinosis is
selected from the group consisting of biceps tendinosis, triceps osis, extensor carpi
radialis breVis tendinosis, common extensor tendinosis, extensor digitorum tendinosis, extensor
digiti minimi tendinosis, extensor carpi ulnaris tendinosis, supinator tendinosis, common flexor
tendinosis, pronator teres tendinosis, flexor carpi radialis tendinosis, palmaris longus
tendinosis, flexor carpi ulnaris tendinosis, digitorum superficialis tendinosis, flexor pollicis
breVis osis, flexor pollicis longus tendinosis, abductor pollicis breVis tendinosis, or
pollicis longus tendinosis, flexor digitorum profiJndus tendinosis, flexor digitorum superficialis
tendinosis, extensor pollicis breVis tendinosis, and extensor pollicis longus tendinosis. In some
embodiments, the tendinosis is selected from the group consisting of flexor pollicis breVis
osis, flexor is longus osis, abductor pollicis breVis tendinosis, abductor
pollicis longus tendinosis, flexor rum profiJndus tendinosis, flexor digitorum superficialis
tendinosis, extensor pollicis breVis tendinosis, and extensor pollicis longus tendinosis.
[0679[ In some embodiments, the tendinopathy is tendinitis. In some
embodiments, the itis is selected from the group ting of extensor hallucis longus
tendinitis, flexor hallucis longus tendinitis, extensor digitorum longus tendinitis, extensor
digitorum breVis tendinitis, peroneus longus tendinitis, peroneus breVis tendinitis, flexor
hallucis breVis itis, flexor digitorum longus tendinitis, posterior tibialis tendinitis,
Achilles tendon tendinitis, and plantar fascia tendinitis. In some embodiments, the tendinitis is
selected from the group consisting of patellar tendinitis, the anterior tibialis tendinitis, the
ing tendinitis, semitendinosus tendinitis, gracilis tendinitis, abductor itis, and
adductor tendinitis. In some embodiments, the tendinitis is selected from the group consisting
offlexor tendinitis, rectus femoris tendinitis, tibialis posterior tendinitis, and quadriceps femoris
tendinitis. In some embodiments, the tendinitis is selected from the group consisting of
supraspinatus tendinitis, infraspinatus tendinitis, pularis tendinitis, and teres minor
tendinitis.
[0680[ In some embodiments, the tendinitis is selected from the group consisting
ofbiceps tendinitis, triceps tendinitis, extensor carpi radialis breVis tendinitis, common extensor
tendinitis, extensor digitorum tendinitis, extensor digiti minimi itis, extensor carpi s
tendinitis, supinator tendinitis, common flexor itis, pronator teres tendinitis, flexor carpi
radialis tendinitis, palmaris longus itis, flexor carpi ulnaris tendinitis and rum
superficialis tendinitis. In some embodiments, the tendinitis is selected from the group
consisting of biceps tendinitis, triceps tendinitis, extensor carpi radialis brevis itis,
common extensor tendinitis, extensor digitorum tendinitis, extensor digiti minimi tendinitis,
extensor carpi ulnaris tendinitis, tor tendinitis, common flexor tendinitis, pronator teres
tendinitis, flexor carpi radialis tendinitis, palmaris longus tendinitis, flexor carpi s
tendinitis, digitorum superficialis tendinitis, flexor pollicis brevis tendinitis, flexor pollicis
longus tendinitis, or pollicis brevis tendinitis, abductor pollicis longus tendinitis, flexor
digitorum profiJndus tendinitis, flexor digitorum superficialis tendinitis, extensor pollicis brevis
tendinitis, and extensor pollicis longus tendinitis. In some embodiments, the tendinitis is
selected from the group consisting of flexor pollicis brevis tendinitis, flexor pollicis longus
tendinitis, abductor pollicis brevis itis, abductor pollicis longus tendinitis, flexor
digitorum profiJndus tendinitis, flexor digitorum superficialis tendinitis, extensor is brevis
itis, calcific tendinitis, and extensor pollicis longus tendinitis.
[0681[ In some embodiments, the tendinitis is caused by c overuse injuries
oftendon failed healing.
[0682[ In some embodiments, the injury or damage is localized very near the
muscle-tendon junction (myotendinous junction).
[0683[ In some embodiments, the tendinitis leads to scarring and fibrosis.
[0684[ The methods of the invention may result in improvement in one or more
of the following: decreasing pain of the affected joint or limb, decreasing stiffi1ess of the
affected joint or limb, increasing mobility of the affected joint or limb, increasing th of
the affected joint or limb, decreasing the rate of tendinopathy progression, decreasing
inflammation, increasing the strength of the tendon, or improving the rate of tendon strength
recovery. Various methods for ing effectiveness of the treatment include, but are not
limited to: lities of the Arm, Shoulder and Hand Score (DASH), Visual Analog Score
(VAS), and grip strength testing.
[0685[ In some ments, the treatment results in increased strength of the
tendon. In some ments, the treatment results in a more rapid rate of tendon strength
recovery. In some embodiments, the treatment results in an increase in tendon strength of about
%, about 40%, about 50%, about 60%, about 70%, about 80%, about 90% within about 1, 2,
3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, or 21 days of administration ofa
compound ofthe invention, as compared to baseline.
[0686[ The methods of the invention may include preventive treatments.
[0687[ In some embodiments, the administering is by direct injection to the
affected site. In some embodiments, the direct injection is accomplished using the "peppering
technique" with or without ultrasound guidance. The "peppering technique" is an injection
method y after the needle is ed into the tender area, multiple small injections are
performed by withdrawing, redirecting and reinserting the needle without emerging from the
skin.
[0688[ In some ments, the methods can further include administering one
or more other therapeutic regimens and/or agents effective for treating a opathy, e.g.,
palliative care, with treatment focusing on anti-inflammatory measures, ing treatment
with nonsteroidal anti-inflammatory drugs (NSAIDs), steroid injections, cortisone injections,
platelet rich plasma (PRP) injections, physical therapy, shock wave y, low-level laser
therapy (phototherapy), cell y, and sclerotherapy.
[0689[ In some embodiments, the one or more es or conditions is psoriasis.
Non-limiting es include: psoriasis vulgaris (including nummular psoriasis and plaque
psoriasis), generalized pustular psoriasis (including impetigo herpetiformis and von
Zumbusch's disease), acrodermatitis continua, pustulosis palmaris et plantaris, guttate
psoriasis, arthropathic psoriasis, other psoriasis (including inverse psoriasis).
[0690[ In some embodiments, the one or more diseases or conditions is itis.
Non-limiting examples include: atopic dermatitis, t dermatitis (e.g., allergic contact
dermatitis, irritant contact dermatitis), stasis dermatitis, dermatitis that led up to steroid
dermatitis, steroid-resistant dermatitis, dermatitis to which tacrolimus is not applicable, chronic
dermatitis, erythroderma (e.g., erythroderma posteczematosa and erythroderma secondary to
dermatoses, toxic erythroderma, infantile desquamative erythroderma, and paraneoplastic
erythroderma), eczema, nummular eczema, dyshidrotic eczema, asteatotic eczema, seborrheic
dermatitis, nsitization dermatitis, stasis dermatitis, urticaria, drug eruption, dermal
vasculitis, prurigo, pruritus cutaneus, erythema (e.g. nodosum or multiforme), rosacea, rosacea-
like dermatitis, lichen , photo-induced dermatitis, or follicular keratosis. In certain
ments, the dermatitis is contact dermatitis, e.g., ic contact dermatitis, e.g., ing
from direct skin contact with a substance such as poison ivy, poison oak, or poison sumac.
[0691[ In some embodiments, the one or more diseases or ions is morphea.
[0692[ In some embodiments, the one or more diseases or conditions is ichthyosis.
[0693[ In some embodiments, the one or more diseases or conditions is Darier's
disease.
[0694[ In some embodiments, the methods can further include administering one
or more other eutic regimens and/or agents effective in treating a skin disorder described
herein, e.g., corticosteroids, immune modulators, vitamin D3 and its analogs, retinoic acids and
their pharmaceutically active derivatives, or combinations thereof. Specific non-limiting
examples of drugs include betamethasone dipropionate, clobetasol propionate, halobetasol
propionate, diflorasone diacetate, amcinonide, desoximethasone, fluocinonide, halcinonide,
mometasone fiiroate, betamethasone valerate, fluocinonide, fluticasone propionate,
triamcinolone acetonide, olone acetonide, flurandrenolide, desonide, hydrocortisone
butyrate, ortisone valerate, alclometasone dipropionate, flumethasone pivolate,
hydrocortisone, hydrocortisone e, prednisone, Benadryl, tacrolimus, picrolimus,
tene, isotretinoin, cyclosporin, anthralin, n D3, cholecalciferol, calcitriol,
calcipotriol, tacalcitol, calcipotriene, ol, 4-hydroxyestradiol, 2—hydroxyestradiol, 2-
hydroxyestrone, 2—benzimidazolylthioacetamide-N-ethylbenzyl (KH7.102), an antibody, a
nucleic acid, or combinations thereof.
[0695[ In some embodiments, the one or more diseases or conditions is Raynaud's
syndrome.
[0696[ In some embodiments, the patient is a human.
[0697[ In some embodiments, the compound of a (I) inhibits one or more
proteins in the Wnt pathway.
[0698[ In some embodiments, the compound of Formula (I) inhibits signaling
induced by one or more Wnt proteins.
[0699[ In some embodiments, the Wnt proteins are chosen from: WNTl, WNTZ,
WNTZB, WNT3, WNT3A, WNT4, WNTSA, WNTSB, WNT6, WNT7A, WNT7B, WNT8A,
WNT8B, WNT9A, WNT9B, WNTlOA, , WNTl l, and WNT16.
[0700[ In some embodiments, the compound of Formula (I) inhibits a kinase
activity.
[0701[ In some embodiments, the compound of a (I) inhibits one or more
Wnt proteins.
Evaluation of Biological Activity
[0702[ The biological activity of the compounds described herein can be tested
using any suitable assay known to those of skill in the art, e.g.,
2005/009997. For example, the activity of a compound may be tested using one or more ofthe
test methods ed below.
[0703[ In another example, one may e in vitro assays for Wnt biological
ty, e.g. stabilization of B-catenin and promoting growth of stem cells. Assays for
biological activity of Wnt include stabilization of B-catenin, which can be ed, for
example, by serial dilutions of a ate inhibitor composition. An exemplary assay for Wnt
biological activity contacts a Wnt composition in the presence of a candidate inhibitor with
cells, e.g. mouse L cells. The cells are cultured for a period of time sufficient to stabilize B-
catenin, usually at least about 1 hour, and lysed. The cell lysate is resolved by SDS PAGE, then
transferred to nitrocellulose and probed with antibodies c for B-catenin.
[0704[ In a fithher example, the activity of a candidate compound can be
measured in a Xenopus secondary axis bioassay (Leyns, L. et a]. Cell (1997), 88(6), 6).
Example 8.
[0705[ Another screening assay for Wnt activity is described as follows. er
cell lines can be generated by stably transducing cells of cancer cell lines (e.g., colon cancer)
with a lentiviral construct that e a Wnt-responsive promoter driving expression of the
firefly luciferase gene.
[0706[ Lentiviral constructs can be made in which the SP5 promoter, a promoter
having eight TCF/LEF binding sites derived from the SP5 promoter, is linked upstream of the
firefly luciferase gene. The lentiviral constructs can also include a hygromycin resistance gene
as a selectable marker. The SP5 promoter construct can be used to transduce SW480 cells, a
colon cancer cell line having a mutated APC gene that generates a truncated APC protein,
leading to de-regulated accumulation of B-catenin. A control cell line can be generated using
another iral construct containing the luciferase gene under the control of the SV40
promoter which does not require B-catenin for activation.
[0707[ ed SW480 cells bearing a reporter construct can be distributed at
approximately 10,000 cells per well into 96 well or 384 well plates. Compounds from a small
molecule compound library can then be added to the wells in og dilutions using a ten
micromolar top concentration. A series of control wells for each cell type receive only buffer
and compound solvent. Twenty-four to forty hours after the addition of compound, reporter
activity for luciferase can be assayed, for example, by on of the BrightGlo luminescence
t (Promega) and the Victor3 plate reader (Perkin Elmer). Readings can be normalized to
DMSO only treated cells, and normalized activities can then be used in the ECso ations.
Table 2 shows the activity of selected indazolecarboxamide s.
Table 2.
————-—
-——-_
-_——-_
_l-——-_
-_——-_
“——-n-
-I_—-_—
47 ——_
01 N -—_
——z-_~m_
ca N ——_
79 -_
_=I=Iil_——
—-fi-_=I=Iil_
172 “——
——-E‘-
188 ““—
Example 9.
[0708[ entative compounds were screened using primary human
mesenchymal stem cells (hMSCs) to determine their ability to induce te differentiation
(process by which tendon is developed).
[0709[ Human Mesenchymal Stem Cell Culture: Primary human mesenchymal
stem cells (hMSCs) were purchased from Lonza (Walkersville, MD) and expanded in
Mesenchymal Stem Cell Growth Media ). Cells between passage 3 and 6 were used for
the experiments.
[0710[ Compound Screening: Each compound was dissolved in DMSO as a
10mM stock and used to prepare compound source plates. For the tenocyte differentiation
assay, serial dilution (1:2, 10-point esponse curves from 10 uM to 19.5 nM) and
compound transfer was performed using the ECHO 550 (Labcyte, Sunnyvale, CA) into 384-
well black clear bottom assay plates (Greiner Bio-One) with riate DMSO backfill for a
final DMSO concentration of 0.17%. hMSCs were plated at 3,000 cells/well in 70 uL/well
co's modified Eagle's medium (DMEM, Life Technologies, Carlsbad, CA) with 1%
Fetal Bovine Serum (FBS, Life Technologies). Bone Morphogenic Factor (BMP) and Fetal
Growth Factor (FGF) (10 ng/ml each, Peprotech, Inc., Rocky Hill, NJ) were used as a positive-
controls for differentiation while negative control wells were treated with 120 nL DMSO for
normalization and calculating ECso . Cells were incubated at 37°C and 5% C02 for 4
days. Cells were fixed using 4% formaldehyde (Electron Microscopy Sciences), and stained
with anti-Sclerasis (anti-SCXA) antibodies t, San Diego, CA) [Webb S., et.al., ic
acid receptor signaling preserves tendon stem cell characteristics and prevents spontaneous
differentiation in vitro, Stem Cell Research & Therapy 2016, 7:45] overnight at 4°C. The cells
were washed with Phosphate Buffered Saline (PBS, Life Technologies) and incubated with
anti-rabbit Alexa-flor 647 secondary antibodies (Life Technologies) and DAPI (Life
Technologies) for 1 hour at room ature. Cells were washed using PBS, and imaged using
the CellInsight CX5 (Life Technologies, 594/633nm filter). Number of cells positive for SCXA
in each well was quantified using the sight CXS. Data was normalized to the average of
12 DMSO treated wells on the same plate using Dotmatics Studies module. The ized
averages (fold change over DMSO) of 3 replicate wells for each compound tration were
ated. Due to solubility limitations of some of the compounds, values for higher doses
were manually corrected and curve fitting and EC50 determinations were performed using
Dotmatics Studies.
[0711[ EC50 for each compound is reported. Table 3 shows the measured activity
for representative compounds of Formula I as described herein.
Table 3.
Comouna
Example 10.
Wnt Signaling inhibition
[0712[ Cell Culture. SW480 cells (ATCC) were cultured in Dulbecco's modified
Eagle's medium (DMEM, Fisher) with 1% aX (Life Technologies), 1%
Penicillin-Streptomycin (Life Technologies), 150ug/ml Hygromycin (Life Technologies) with
% fetal bovine serum (FBS) (Hyclone) at 37°C, 5% C02,
[0713[ Wnt Reporter Assay. Human colorectal cancer cell line SW480, stably
expressing the Wnt responsive promoter linked to luciferase gene, was plated overnight at 4 X
10e4 well in DMEM, high glucose, no glutamine, no phenol red (Life Technologies), 1%
GlutamaX (Life Technologies), 1% Sodium Pyruvate (Life Technologies), 1% Penicillin-
omycin (Life Technologies) with 1% Fetal Bovine Serum (Hyclone). Cells were then
treated with DMSO (vehicle control) or COMPOUND 175 at 10 uM top tration and half
a log dilution up to 10 concentrations (10, 3, 1, 0.3, 0.1, 0.03, 0.01, 0.003, 0.001 and 0.0003
uM). Cells were incubated for 48 hours at 370C. 15 pl of -G10 (Bright-G10TM Luciferase
Assay System, Promega) was added to the cells and luminescence was measured using the
Cytation 3 plate reader (Biotek). Data was normalized using the DMSO control and inhibition
profile and ECso was calculated using Prism 4 (GraphPad Software Inc, La Jolla, CA, USA).
Prism 4.0 was used to calculate the ECso ofthe Wnt reporter inhibition assay.
[0714[ Exposure ofthe SW480 cells to compound 175 at concentrations of 10, 3,
1, 0.3, 0.1, 0.03, 0.01, 0.003, 0.001 and 0.0003 uM showed that compound 175 inhibited Wnt
y activity in these cells in a dose-dependent manner with EC50 of ~ 152.9 nM (see FIG.
Example 11.
Tendon Differentiation
[0715[ Cell Culture. Primary human mesenchymal stem cells , Lonza
Inc) were cultured in MSCGMTM Mesenchymal Stem Cell Growth Medium, with 10% FBS
(Lonza) 10% fetal bovine serum (FBS) ne) at 37°C, 5% C02,. hMSCs were used between
passage 2 and 6 and were never allowed to reach confluence to maintain a naive state.
[0716[ Tenocyte Differentiation Assay. For tenocyte differentiation, hMSCs
were plated in 384-well plates at 1 X 104 cells/well in Dulbecco's modified Eagle's medium
(DMEM, ThermoFisher) with 1% fetal bovine serum (FBS) (Hyclone). Cells were then treated
with DMSO (vehicle control) or compound 175 at 750 nM top concentration and 2-fold dilution
up to 8 concentrations (750, 333.3, 166.6, 83.3, 41.7, 21.7, 10.8and 5.8 nM) and incubated for
7 days at 37°C. A combination of BMP and FGF ml each, Peprotech, Inc.) was used as
a ve control. At the end of 7 days, cells were fixed using 4 % methanol- free formaldehyde
(Electron Microscopy es) for 10 min, washed with phosphate buffered saline (PBS) 3
times, perrneabilized with PBS containing 0.3% triton X-lOO (Sigma) for 5 min, blocked with
PBST (PBS containing 0.3% triton X-lOO) with 3% bovine serum albumin (BSA, Sigma) for
1 h at room temperature, followed by incubation with primary antibodies in PBST + BSA
overnight at 4°C. Cells were rinsed 3 times with PBS and incubated with hore-
conjugated secondary antibody in PBST + BSA and DAPI for 1 h at room temperature and
washed with PBS 3 times. Plates were imaged using a CX5 high-content imager
(ThermoFisher) and the % of cells stained positive were determined using a cell scoring
algorithm (ThermoFisher). Data was plotted and EC50 was calculated using Prism 5 (GraphPad
Software Inc, La Jolla, CA, USA). Prism 5.0 was used to calculate the EC50 of the Tenocyte
differentiation assay.
[0717[ Exposure ofthe hMSCs to compound 175 at concentrations of 750, 333.3,
166.6, 83.3, 41.7, 21.7, 10.8and 5.8 nM showed that COMPOUND 175 induced the expression
of SCXA, TenacinC and Tenomodulin, in a dose-dependent manner with an EC50 between
139- 189 nM (see FIGS. 2A-C and 3), indicating a differentiation ofhMSC into tenocytes.
Anti-inflammation
[0718[ Cell Culture. THP-1 cells (Catalog # TIB-202, ATCC, as, VA)
were cultured in Roswell Park Memorial Institute (RPMI) 1640 Medium (Catalog # 21870-
100, o, NY) with 1% L-glutamine, 1% HEPES, 1% Sodium Pyruvate, 2% Sodium
Bicarbonate supplemented with 100 units/mL penicillin, 50 ug/mL streptomycin, 2-
mercaptoethanol (0.05mM) [basal medium] and 10% fetal bovine serum og # 16140089,
Life Technologies, ad, CA) at 37°C and 5% C02.
[0719[ ne Production Assay. THP-1 cells were cultured in basal media
with 1% FBS for 24 hours before the start of the assay. THP-1 cells were plated at 6 X 10e4
cells/well and treated with DMSO (vehicle control) or compound 175 at 10 uM highest test
tration and 2 to 3.5-fold serial dilutions up to 8 concentrations (10, 3.5, 1, 0.5, 0.1, 0.035,
0.01, 0.005 uM). For the TNFa assay, 50 ng/mL of LPS was added to the wells after 2 hours
to induce cytokine production, and cells were incubated for 5 hours at 37°C. For the IL6 assay,
500 ng/ml of LPS was added after 2 hours and cells were incubated for 22 hours at 37°C. Plates
were spun in a centrifuge for 1 minute at 10,000 rpm and supematants were collected for
ELISA. Supematants were diluted 1:1 for the TNFa assay and 1:4 for the IL6 assay using the
assay medium. ELISA was performed using Human TNF-a ELISA MAXTM Deluxe og
#430204, Biolegend, San Diego, CA) and Human IL-6 ELISA MAXTM Deluxe (Catalog #
430504, Biolegend, San Diego, CA) kits. Briefly, 96-well plates were coated with the
appropriate capture dy overnight and washed to remove excess antibody. Blocking buffer
was added and incubated for 1 hour to prevent non-specific g. Diluted supematants were
incubated in the coated plates for 2 hours at room temperature. Following washes to remove
unbound proteins, biotinylated detection antibody was added and incubated for 30 mins at room
temperature, followed by washes to remove unbound excess antibody. Avidin-HRP was then
added and incubated for 30 mins at room temperature. Following several washes to remove
unbound avidin-HRP, the TMB substrate was added and the plates were read on the Cytation 3
plate reader (Biotek Inc., Winooski, VT) at an absorbance of 450 nm with correction at 570
nm. All samples were processed in triplicate. tion profile and EC50 was calculated using
Prism 5 (GraphPad Software Inc, La Jolla, CA, USA). Prism 5.0 was used to calculate the EC50
of the TNFa and IL6 tion assays.
[0720[ Exposure 1 cells to LPS induced the production ofboth TNFa and
IL6. Compound 175 treatment inhibited the LPS-induced cytokine production in these cells in
a dose-dependent manner with average EC50 ranging from 342 - 547 nM for TNFa and 356 -
629 nM for IL6 (see FIGS. 4A-B), with results generated from two independent assays and
three replicates per assay.
Example 12.
Rat Tendinopathy Model 11)
[0721[ Rat Model of enase-induced Tendonitis. Fifty (50 ul) of
Collagenase Type IA (10 mg/ml in PBS, pH 7.4, approximately 469 units/mg) (Catalog
#C5138, Sigma, St. Louis, MO) was injected into the Achilles tendon of both ankles near the
osteotendinous on of male Sprague Dawley CD ®IGS rats (CRL, Inc.), using insulin
syringes with 28.5 G needle.
[0722[ Delivery of compound 175 by Topical Application. Rats were divided
into 6 groups with 5 animals per group: Group 1 (sham injection); Group 2 (Collagenase-
Vehicle); Group 3 (Collagenase- nd 175 10 mg/mL with 1% BA) and Group 4
(Collagenase—COMPOUND 175 10 mg/mL with 0.5% Tween 80). COMPOUND 175,
formulated in 1% HPMC 1/20% PG/1% BA or 1% HPMC 40-0101/20% PG/0.5%
Tween 80, or vehicle (1% HPMC 40-0101/20% PG/1% BA) was applied at a dose volume of
uL/cm2 to cover a 2 cm2 dose area to the skin near the Achilles tendon region ofboth ankles
ofthe collagenase-injected rats using an applicator and rubbed into the skin for 10 seconds. All
rats were periodically observed for any pain, illnesses or abnormalities. At various time ,
blood was collected for plasma in m heparin coated tubes by saphenous vein bleeding. For
histology, rats were euthanized using isoflurane, tendons were isolated (n=6 tendons/group),
fixed in 10% ed formalin (Catalog # SF93-4, , Pittsburgh PA) and H & E histology
ng was performed at a secondary site (Pacific Pathology, San Diego, CA). For
biochemical analysis, tendons were isolated (n=4 tendons/group), flash frozen in liquid nitrogen
and then stored at -80°C for subsequent biochemical analysis (not reported).
[0723[ Histology Scoring of Tendons. There is biological variability in response
to collagenase when injected directly into the tendons. This results in varying degrees of
severity and location of inflammation as well as tendon degeneration (Urdzikova et al., Human
multipotent mesenchymal stem cells improve healing after collagenase tendon injury in the rat.
Biomed Eng Online. 2014 Apr 9, 13:42). Therefore, the entire tendon was isolated and placed
in a tissue cassette and ed in paraffin. Five (5) um sections were generated and an
average of 3 sections were fixed on one slide, with a minimum of eight (8) slides per tendon
and subjected to Hematoxylin & Eosin (H&E) staining. Slides were Viewed under an upright
light cope (EVOS AMEX-1200) at a 10X magnification and scored blinded using a 1-4
scoring system of severity: 1 - representing severe damage and 4 - representing normal tendon,
for Linearity of the fiber structure, Shape of the tendon cells, Density of the tendon cells,
Inflammation, and Hemorrhage for a total score of twenty (20) using a modification of that
described previously (Urdzikova et al., 2014 - see Table 3). After the analysis was completed,
the scorer was ded and scores for each criterion was annotated, totaled and total scores
from each section were averaged together to generate a final score for each rat followed by
averaging of scores for a given treatment group.
[0724[ Biomarker Assays in Plasma. Following manufacturer’s instructions,
KC/GRO plasma levels were ined using the KC/GRO Immunoassay kit (Catalog# 900-
K57, ech, Rocky Hill, NJ). Briefly, 96-well plates were coated with the anti-rat KC/GRO
capture antibody overnight and washed to remove excess antibody. Plasma samples were
incubated in the coated plates for 2 hours at room ature. ing washes to remove
unbound proteins, biotinylated anti-rat KC/GRO detection antibody was added and incubated
for 30 mins at room temperature. Following washes to remove unbound excess antibody,
avidin-HRP was added and incubated for 30 mins at room temperature. Following washes to
remove unbound Avidin-HRP, the ABTS ate was added and the plates were read on the
on 3 plate reader (Biotek Inc., Winooski, VT) at an absorbance of 525 nm with correction
at 450 nm. All samples were processed in cate.
[0725[ Data Analysis. For tendon scoring, each section was analyzed following
a l-4 point scoring system as previously described (Urdzikova et al., 2014) with the exclusion
of one variable, the Thickness of the epitenon, due to the difficulty in discerning the epitenon
layer in histology sections. Table 4 below briefly summarizes the g system.
Table 4.
Score and Criteria
1 = no linear areas
2 = 20-50% linear
Linearity of the fiber structure
3= > 50% linear
4 = linear (normal)
1 = predominantly round
2 = tely round
Shape ofthe tendon cells
3 = ly oval
4 = linear normal
1 = sheets of cells
2 = moderate increase
Density ofthe tendon cells
3 = slight increase
4 = sparse(normal)
1 = severe increase
2 = moderate increase
Inflammation
3 = slight increase
4 = none
1 = predominant hemorrhage
2 = multiply areas in each field
Hemorrhage
3 = sparse or patchy
4 = none
[0726[ aHistology Scoring was modified by Samumed to exclude one variable,
Thickness of the epitenon.
[0727 [ In this study, a total of 64 sections were scored for Group 1 (sham injection
group) and approximately 96 sections each for Group 2 (Collagenase-Vehicle), Group 3
(Collagenase-compound 175 with BA preservative) group and Group 4 (Collagenasecompound
175 without preservative). To determine tical significance between groups,
student’s t-test was performed with p<0.05 considered as significant for histology scoring and
biomarker assay.
[0728[ Compound 175 Ameliorates Collagenase-Induced Tendinopathy.
Collagenase induced Tendonitis in rats recapitulates acute tendon injury in humans with
inflammation resulting within a few hours (Urdzikova et al., 2014). Using an entional
ch, topical formulation of compound 175 was administered 24 hours post collagenase
injection into the Achilles tendon. The Collagenase-inj ected rats were dosed with vehicle alone
or nd 175 (10 mg/mL) formulated with or without BA as a preservative for 21
consecutive days. Group 1 rats that received sham injections served as a control for no disease
induction.
[0729[ As shown in a significant presence of inflammatory cells was
t in the Collagenase-vehicle group. Consequently, there was evidence of tendon
degeneration and damage in the Collagenase-vehicle group compared to normal tendons found
in the sham control group. Amelioration of inflammation as well as tendon degeneration by
compound 175 is demonstrated in The histopathology ofthe tendon from the ent
groups revealed tendons with decreased inflammation as well as improved structure of the
fibers and tendon cells with respect to linearity, shape and density. This observation was fithher
confirmed by blinded ogy scoring. As shown in upon topical treatment with
compound 175, both compound 175 treatment groups demonstrated statistically significant
ses in the tendon scores, achieving a score of 14.0 (:: 0.217) in Group 3 (Collagenase-
compound 175 with BA) and a score of 12.2 (:: 0.284) in Group 4 (Collagenase-compound 175
without BA), compared to a score of 9.14 (:: 2.43) in Group 2 (Collagenase-vehicle), with a p-
value of <0.01 and <0.05, respectively by student’s t test.
[0730[ Compound 175 Reduces Plasma Biomarker KC/GRO in the
enase-induced Tendon Injury Model. KC/GRO is an inflammatory biomarker
reported to be associated with the development of itis. In this study, plasma
concentrations of KC/GRO were investigated at various timepoints of the study. As shown in
Table 4 and KC/GRO levels were elevated in the Group 2 (Collagenase-vehicle) on
Days 5-21, ranging from 814 - 1483 pg/mL, while both the COMPOUND 175-treated groups,
with or without BA, had lower levels of KC/GRO in plasma, g from 400 — 480 pg/mL
and 347 - 451 pg/mL, respectively. Both nd eated groups (Groups 3 and 4)
demonstrated a statistically significant decrease in plasma KC/GRO levels compared to
Collagenase-vehicle control on Days 7 and 21 (p<0.05 by student's t test, Table 5). Overall, the
decrease of a plasma biomarker of inflammation corroborates the ability of compound 175 to
ameliorate tendonitis.
Table 5.
Plasma KC/GRO Concentration n 1 mL
Groun 4
Day COmpound 175 Compound 175
Vehicle
(10 mg/mL with (10 hout BA,
(0 mg/mL)
0.5% BA With 0.5% Tween 80
—fl 2261 57.4 332 1 51.3 530 1 31.4
—- 5741106 521 1 23.9 637 1120
—- 3761156 6131614 5411569
I11651465 4601467 4101660
1463 1 266a 421 1 572* 451 1 76.6*
—II 1356 1 367a 400 1 10.3 424 1 76.2
m614 1 924a 406 1 633* 347 1111*
[0731[ 3Mean values were above quantitation limit (AQL>1000 pg/mL) and are
reported as estimated.
[0732[ * p<0.05 (student’s t test) in Compound 175-treated
groups (Groups 3 and
4) as compared to Group 2 le) on Days 7 and 21.
[0733[ Tendinopathy is an acute injury of the tendon that involves inflammation
and tendon damage. If left untreated, repeated injury can lead to tendon ruptures and
require surgery. The presence or absence of the preservative benzyl alcohol has no effect on
the efficacy of compound 175. Treatment with compound 175 ameliorates tendinopathy as
ed by blinded histological scoring of the . To fithher confirm this finding, it has
shown that compound 175 also results in a decrease of an inflammatory plasma biomarker,
KC/GRO.
Example 13.
Rat tendinopathy model 12)
[0734[ Fifty (50 ul) of Collagenase Type IA (10 mg/ml in PBS, pH 7.4,
approximately 469 units/mg) (Catalog #C5138, Sigma, St. Louis, MO) was injected into the
es tendon of both ankles near the osteotendinous junction of male Sprague Dawley CD
®IGS rats (CRL, Inc.), using insulin syringes with 28.5 G needle.
[0735[ Delivery of compound 175 by Topical ation. Rats were divided
into 6 , with 6 animals per group except 8 s in Group 2: Group 1 (sham injection),
Group 2 (Collagenase-Vehicle with 0.5% Phx), Group 3 (Collagenase-compound 175 3 mg/mL
with 0.5% BA), Group 4 (Collagenase—compound 175 10 mg/mL with 0.5% BA), Group 5
(Collagenase— compound 175 3 mg/mL with 0.5% Phx) and Group 6 (Collagenase—compound
175 10 mg/mL with 0.5% Phx). COMPOUND 175, either at 3 or 10 mg/ml, prepared in either
1% HPMC 40-0101/20% PG/0.5% BA or 1% HPMC 40-0101/20% PG/0.5% Phx or vehicle
(1% HPMC 1/20% PG/0.5% Phx) was applied at 30 uL/cm2 over a 2 cm2 area to the
skin near the Achilles tendon region of both ankles of the collagenase-injected rats using an
applicator, and rubbed into the skin for 10 seconds. All rats were periodically observed for any
pain, illnesses or abnormalities. At various time points, blood was collected for plasma in
lithium heparin coated tubes by saphenous vein bleeding. For histology, rats were euthanized
using isoflurane, tendons were isolated (n=8 tendons/group), fixed in 10% buffered formalin
(Catalog #SF93-4, , Pittsburgh, PA) and H & E ogy staining was performed at a
secondary site (Pacific Pathology, San Diego, CA). For biochemical analysis, tendons were
ed (n=4 tendons/group), flash frozen in liquid nitrogen and then stored at -80°C for
subsequent biochemical analysis (not reported). Additionally, one (1) day after collagenase
injection, 4 tendons were collected from Group 2 (vehicle) to e the induction of
inflammation (not reported).
[0736[ There is biological variability in response to collagenase when injected
directly into the tendons. This results in varying degrees of severity and location of
inflammation as well as tendon degeneration (Urdzikova et al., 2014). Therefore, the entire
tendon was isolated and placed in a tissue cassette and embedded in paraffin. Five (5) um
sections were generated with an average of 3 sections being fixed on one slide with a minimum
of eight (8) slides per tendon and subjected to Hematoxylin & Eosin (H&E) staining. Slides
were viewed under an upright light microscope (EVOS AMEX-1200) at a 10X magnification
and scored blinded using a 1-4 scoring system of severity: 1- representing severe damage and
4 - representing normal tendon, for ity of the fiber structure, Shape of the tendon cells,
Density of the tendon cells, Inflammation, and Hemorrhage for a total score of twenty (20)
using a modification of that described previously kova et al., 2014 — see Table 3). After
the analysis was completed, the scorer was unblinded and scores for each criterion was
annotated, totaled and total scores from each section were ed er to generate a final
score for each rat ed by averaging of scores for a given treatment group.
[0737[ Biomarker Assays in Plasma. Following cturer’s ctions,
KC/GRO plasma levels were determined using the KC/GRO Immunoassay kit (Cat# 900-K5 7,
Peprotech, Rocky Hill, NJ). Briefly, l plates were coated with the anti-rat KC/GRO
capture antibody overnight and washed to remove excess dy. Plasma samples were
incubated in the coated plates for 2 hours at room temperature. Following washes to remove
d proteins, biotinylated anti-rat KC/GRO detection antibody was added and incubated
for 30 mins at room temperature. ing washes to remove unbound excess dy,
avidin-HRP was added and incubated for 30 mins at room temperature. Following washes to
remove unbound avidin-HRP, the ABTS substrate was added and the plates were read on the
Cytation 3 plate reader (Biotek Inc., Winooski, VT) at an absorbance of 525 nm with correction
at 450 nm. All samples were processed in triplicate.
[0738[ Data Analysis. For tendon scoring, each section was ed following
a 1-4 point scoring system as previously described (Urdzikova et al., 2014) with the exclusion
of one variable, Thickness of the epitenon, due to difficulty in discerning the epitenon layer in
the histology sections. Table 2 below briefly summarizes the scoring system. In this study, a
total of 94 sections were scored for Group 1 (sham injection, l group) and between 92-
116 sections for Group 2 (Collagenase-Vehicle with 0.5%Phx), Group 3 (Collagenasecompound
175 3 mg/mL with 0.5% BA), Group 4 (Collagenase—compound 175 10 mg/mL
with 0.5% BA), Group 5 (Collagenase—compound 175 3 mg/mL with 0.5% Phx) and Group 6
(Collagenase—compound 175 10 mg/mL with 0.5% Phx).
[0739[ Compound 175 Ameliorates Collagenase-Induced Tendinopathy.
Collagenase-induced tendonitis in rats recapitulates acute tendon injury in humans with
inflammation ing within a few hours (Urdzikova et al., 2014). Using an interventional
WO 75858
approach, topical formulation of compound 175 was administered one day (~24 hours) after the
injection of collagenase into the Achilles tendon. The collagenase-injected rats were dosed
with vehicle alone (containing 0.5% PhX) or compound 175 (3 or 10 mg/mL) formulated with
either 0.5% BA or 0.5% PhX as a preservative for twenty-one (21) consecutive days. Group 1
rats (sham injections) served as control animals for no disease induction.
[0740[ As shown in a cant ce of inflammatory cells was
evident in the Collagenase-vehicle group (Group 2). Consequently, there was evidence of
tendon degeneration and damage in the enase-vehicle group ed to normal tendons
found in the sham control group (Group 1). Amelioration of inflammation as well as tendon
degeneration by compound 175 is demonstrated in The athology of the tendon
from the compound 175-treated groups revealed tendons with sed inflammation as well
as improved structure ofthe fibers and tendon cells with respect to linearity, shape and density.
This observation was further confirmed by blinded Histology scoring. As shown in
upon topical treatment with compound 175, all four (4) compound 175-treated groups
demonstrated statistically significant increases in the tendon scores, achieving a score of 14.5
(:: 1.15) in Group 3 (Collagenase-compound 175 3 mg/mL with 0.5% BA), a score of 14.8 (::
0.968) in Group 4 (Collagenase—compound 175 10 mg/mL with 0.5% BA), a score of 15.1 (::
0.506) in Group 5 (Collagenase—compound 175 3 mg/mL with 0.5% PhX) and a score of 13.2
(:: 0.855) in Group 6 (Collagenase—compound 175 10 mg/mL with 0.5% PhX), compared to a
score of 8.57 (:: 0.672) in Group 2 (Collagenase-vehicle), with p-values of <0.001 (Groups 3,
4 and 5) and <0.01 (Group 6) versus Group 2, by student’s t test.
[0741[ Compound 175 s Plasma Biomarker KC/GRO in the
Collagenase-induced Tendon Injury Model. KC/GRO is an inflammatory biomarker
reported to be associated with the development of tendonitis. In this study, plasma
concentrations of KC/GRO were investigated at various ints of the study. As shown in
Table 5 and , KC/GRO levels were elevated in Group 2 (Collagenase-vehicle with 0.5%
PhX) on Days 5-21, ranging from 488 - 778 pg/mL, while all four compound 175-treated groups
had decreased levels of KC/GRO in plasma, ranging from 150-561 pg/mL. Compound 175 at
both 3 and 10 mg/mL dose concentrations, with either BA or PhX as preservative (Groups 3-6),
demonstrated a tically significant decrease in plasma KC/GRO levels compared to vehicle
control (Group 2) on Days 5, 7 and 21 5, by student's t test) as indicated in Table 6.
Overall, the decrease of a plasma biomarker of inflammation corroborates the ability of
compound 175 to ameliorate itis.
Table 6.
Plasma KC/GRO Concentration n 1 mL)
Comuound 175-Treated Grou n s
05% Phx
219 i 94.9 254 i 60.6
450 i 53.1 375 i 44.4
451 i 50.2 405 i 42.1
778 i 56-9 328 i 37-1”
708 i 95.5 299 i 539*
704 i 170 265 i 20.8
488 i 98.8 342 i 39.7
[0742[ * p<0.05 nt’s t test) on Day 7 (Group 6) and on Day 21 (Group 3)
compared to Group 2 (Vehicle) on Days 7 and 21.
[0743[ ** p<0.01 (student’s t test) on Day 5 compound 175-treated groups
(Groups 4, 5 and 6) compared to Group 2 (Vehicle).
[0744[ Tendinopathy is an acute injury of the tendon that es inflammation
and tendon damage. If left ted, repeated injury can lead to tendon ruptures and
require surgery. Both doses of compound 175 (3 and 10 mg/ml with either BA or Phx
preservatives) were efficacious in the rat tendonitis model. Based on the foregoing results,
neither preservative, BA or PhX, appeared to e the efficacy of compound 175. The
results demonstrate that treatment with compound 175 ameliorated tendinopathy as assessed by
blinded histological g of the tendon. To fithher confirm this finding, it has been shown
that compound 175 also s in a decrease of an inflammatory plasma biomarker, KC/GRO.
Example 14.
Pharmacokinetics
[0745[ Thirty (30) na'1've male Sprague Dawley rats were divided into three dose
groups (Groups 1-3, 10 animals/group). compound 175 was formulated in 1% hydroxypropyl
methylcellulose (HPMC) 40-0101/20% propylene glycol at 1 or 10 mg/mL containing 1%
benzyl alcohol (BA) as preservative s 1 and 2) or at 10 mg/mL containing 0.5% Tween
80 (used in earlier rat studies) without BA preservative (Group 3). The compound 175
formulation was d once topically to each ankle of the hind leg of each animal at 60 uL
volume (30 uL/cm2 X 2 cm2) over the area ofthe Achilles tendon. The study design is presented
in Table 7 below.
Table 7.
Left and Ri_ht Hind limba
Dose per Total Dose
Group N/Sex ° ' Unit Area Volume
_ 10/M _
_ 10/M _
/M preseervativ
[0746[ a Topical application to left and right ankles of the hind limbs over the
area ofthe Achilles tendon
[0747[ 1’ Compound 175 topical formulations: 1% HPMC 40-0101/20%
propylene glycol containing 1% benzyl alcohol (BA) as preservative (Groups 1 and 2), and
without BA preservative but with 0.5% Tween 80 (Group 3).
[0748[ Blood Sample Collection. Blood samples (~05 mL) were collected via
cardiac puncture, into tubes containing KzEDTA as anticoagulant, at l, 2, 4, 7 and 24 hours
post-dose from 2 animals per timepoint (n=2). Plasma was harvested and frozen at -80°C for
bioanalysis.
[0749[ Tissue Sample Collection. The Achilles s from both ankles were
collected following euthanasia at l, 2, 4, 7 and 24 hours post-dose from 2 animals per int
(n=4) from all . Skin tissue samples were collected from the dose-site at 7 and 24 hours
post-dose from 2 animals per timepoint (n=4) in Group 2. Tissues were frozen at -80°C for
bioanalysis. Blood and tissue tion schedule is outlined in Table 8 below.
Table 8.
Tendon
Blood Collectioln Collection
) Collection
Timepoints (h) T' '
lmepomts
Timepoints (11)];
1,2,4,7and24 1,2,4,7and24
[0750[ NS: No samples collected.
[0751[ 1) n=2/timepoint/group for blood collection.
[0752[ 1’ mepoint/group for tendon and skin tion (2 animals per
timepoint X 2 ankles).
[0753[ Experimental Procedures. Skin tissue samples were processed using the
following ures: 1) Weigh tissue and homogenize using cryoPrep (Covaris), 2) Add 9X
volume of AcetonitrilezMethanol (70:30) and vorteX for one hour, 3)Aliquot 100 uL of tissue
homogenate into 96 microtube polypropylene plate, 4) Add 10 uL ing standard to each
standard, 5) Add 10 uL anol in all samples and blanks, 6) Add 10 uL ofinternal standard
(IS) to all tubes except blanks, 7) Spin in centrifiige at 3000 rpm for 10 minutes, and 8) Transfer
100 uL of supernatant into 96-well plate containing 150 uL of water. Cap and vorteX for
LC/MS/MS analysis.
[0754[ Bioanalytical and Pharmacokinetic is. The chromatograms of
the samples were integrated and calibrated using Analyst 1.6.2 (AB ScieX, Redwood City, CA).
Linear sion with UK2 weighting and internal standardization was used for standard
calibration, with an acceptance criterion of::30% ofnominal standard concentration. The lower
limit of quantitation (LLOQ) was 2.00 ng/mL (plasma), 6.00 ng/g (tendon) and 25 .0 ng/g (skin).
Pharmacokinetic parameters were estimated by noncompartmental analysis from individual
concentration versus time profiles using Pheonix WinNonlin version 6.3 (Certara, Inc.,
Princeton, NJ). The time to maximum concentration (tmax) and the maximum concentration
(Cmax) were determined based on measured plasma and tissue concentrations. The area under
the curve (AUCmast) was calculated using the linear trapezoidal rule.
[0755[ ic re. Systemic exposure to nd 175 was low
compared to tendon and skin tissues after a single topical administration of a 1 or 10 mg/mL
formulation, with either BA or Tween 80. Plasma exposure in Groups 1 and 2 (1 and 10 mg/mL
formulation containing BA) were: 1.30 and 10.6 ng/mL Cmax and 0.650 and 36.1 h-ng/mL
AUC(0-last), respectively, showing a dose-proportional increase in Cmax and r than
dose-proportional increase in total exposure (AUC(0-last)). Exposure in Group 3 (10 mg/mL
formulation without BA but ning Tween 80) was 1.94 ng/mL Cmax and 6.79 h-ng/mL
AUC(0-last), which was ~0.2x of Group 2 (10 mg/mL with BA).
[0756[ Tendon Exposure. Compound 175 es tendon re in Groups
1 and 2 (1 and 10 mg/mL formulation containing BA) was 519 and 1930 ng/g Cmax and 2164
and 7270 h-ng/g AUC(o-1ast), respectively, indicating a less than dose-proportional increase in
exposure: 3.4x increase in AUC(o-1ast) for a 10x dose-increment. Group 3 (10 mg/mL without
BA) tendon exposure was 7053 ng/g Cmax and 28077 h-ng/g AUC(o-1ast), Which was ~4x of
Group 2 (10 mg/mL with BA). Tendon to plasma ratios (AUC(o-1ast)) were 3329 and 202 in
Groups 1 and 2 (1 and 10 mg/mL formulations containing BA) and 4135 in Group 3 (10 mg/mL
without BA).
[0757 [ Skin concentrations in Group 2 (10 mg/mL containing BA) were reported
as estimated as all values were above quantitation limit (AQL>25000 ng/g). Mean skin
concentrations at 7 and 24 hours post-dose were ~208600 and 113375 ng/g, y 1000x
tendon concentrations at these timepoints. Plasma, Tendon and Skin PK parameters are
presented below in Table 9 and tration-time profiles are displayed in .
Table 9.
Tissue tmax (h)
0.650
IBM—_- 36-1
1% BA 1930 7270
m—208600 NC NC
"-M6.79 4135
ative 7053 28077
[0758[ Total dose volume = 60 uL/ankle ofhind limb, n=2 (plasma), n=4 (tendon,
skin, 2).
[0759[ NC = not calculated due to lack of sufficient timepoints for AUC
calculation.
[0760[ 1) Above quantitation limit (AQL>25000 ng/g) - value ed as
estimated.
[0761[ Systemic exposure to compound 175 in rats after a single topical
administration was low in all dose groups compared to tendon exposure, with tendon to plasma
ratios ranging from 202 to 4135 across groups. A dose dependent increase in plasma and tendon
exposure was seen n the l and 10 mg/mL formulations ning BA. While the 10
mg/mL formulation without BA (containing Tween 80) showed lower ic exposures
(0.2x) compared to the formulation containing BA, the tendon exposure was 4 fold higher than
the 10 mg/mL formulation containing BA.
[0762[ The term “comprising” as used herein is synonymous with “including,”
“containing,” or “characterized by,” and is inclusive or open-ended and does not exclude
additional, ted elements or method steps.
Claims (17)
1. A method of treating of one or more diseases or conditions independently selected from the group consisting ofa tendinopathy, dermatitis, psoriasis, a, ichthyosis, Raynaud's syndrome, and Darier's disease, the method comprising stering to a subject (e.g., a subject in need thereof) a compound or pharmaceutically acceptable salt thereof having the structure of Formula 1: o / R4 NH R2 N wherein: R1, R2 and R4 are independently selected from the group consisting of H, C1.9 alkyl, halide, —N(R10)2, —XR10, CN, —OCF3 and —CF3, R3 is selected from the group consisting of carbocyclle6, heterocyclle6, arle6 and heteroarle6, R5 is selected from the group consisting of -(C1-9 alkyl)ncarbocyclle7, -(C1-9 nheterocyclle7, -(C1_9 alkyl)narle7 and -(C1_9 alkyl)nheteroarle7, each R6 is 1-5 substituents each selected from the group consisting of H, C1_9 alkyl, halide, amino, -OCF3, -CF3, -CN, -XR10, -(C1_9 alkyl)ncarbocyclle8, -(C1_9 alkyl)nheterocyclle8, -(C1_9 narle8, -(C1_9 alkyl)nheteroarle8, -C(=O)R11, - N(R10)C(=O)R“, -(C1_9 alkyl)nN(R10)2, -(C1_9 alkyl)nN(R10)SOZR“ and -SOzR11, each R7 is 1-5 substituents each selected from the group consisting of H, C1_9 alkyl, halide, amino, -OCF3, -CF3, -CN, -XR10, -(C1-9 alkyl)ncarbocyclle9, -(C1-9 alkyl)nheterocyclle9, -(C1_9 alkyl)narle9, -(C1_9 alkyl)nheteroarle9, -C(=O)R11, - N(R10)C(=O)R“, -(C1_9 alkyl)nN(R10)2, -(C1_9 nN(R10)SOZR11 and , each R8 is 1-5 substituents each selected from the group consisting of H, C1_3 alkyl, halide, amino, OCF3, -CF3 -CN, -XR12, R13, -N(R12)C(=O)R13, -(C1_9 alkyl)nN(R12)2, - (C1_9 alkyl)nN(R12)SOZR13 and -SOle3, each R9 is 1-5 substituents each ed from the group consisting of H, C1_3 alkyl, halide, amino, -OCF3, -CF3 -CN, -XR12, -C(=O)Rl3, -N(R12)C(=O)R13, -(C1.9alkyl)nN(R12)2, - (C1_9 alkyl)nN(R12)SOZR13 and -SOle3, each R10 is independently selected from the group consisting of H, C1_9 alkyl, -(C1_9 alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclle8, -(C1_9 alkyl)nheterocyclle8, -(C1_9 narle8 and -(C1_9 alkyl)nheteroarle8, each R11 is independently selected from the group consisting of C1_9 alkyl, -N(R14)2, - (C1.9 alkyl)ncarbocyclle8, -(C1-9 alkyl)nheterocyclle8, -(C1-9 alkyl)narle8 and -(C1-9 alkyl)nheteroarle8, each R12 is independently selected from the group consisting of H, C1.9 alkyl, -(C1-9 alkyl)nN(R14)2, -(C1_9 alkyl)ncarbocyclyl, -(C1-9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9 alkyl)nheteroaryl, each R13 is independently selected from the group consisting of C1_9 alkyl, -N(R14)2, - (C1.9 alkyl)ncarbocyclyl, -(C1-9 alkyl)nheterocyclyl, -(C1-9 alkyl)naryl and -(C1-9 alkyl)nheteroaryl, each R14 is ndently selected from the group ting of H, C1_3 alkyl, carbocyclyl and aryl, each X is selected from the group consisting of a bond, and -S-, and eachnis Oor l.
2. The method of claim 1, wherein R1, R2 and R4 are H.
3. The method of claim 2, wherein R3 is dle6.
4. The method of claim 2, wherein R3 is 5-pyrimidinle6.
5. The method of claim 2, wherein R3 is 4-pyridazinle6.
6. The method of claim 3, wherein R6 is one substituent and is -N(R9)C(=O)R10.
7. The method of claim 3, wherein R6 is one tuent and is — (CH2)heterocyclle8.
8. The method of claim 7, wherein the R6 heterocyclyl is independently selected from the group consisting of azetidinleS, pyrrolidinleS, piperidinle8, piperazinleS, and morpholinleS.
9. The method of claim 2, wherein R5 is 3-pyridle7.
10. The method of claim 3, wherein R5 is 3-pyridle7.
11. The method of claim 2, wherein R5 is 5-pyrimidinle7.
12. The method of claim 2, wherein R5 is 4-pyridazinle7.
13. The method of claim 9, wherein R7 is one substituent and is selected from the group consisting of halide, -OCF3, -CF3, -(C1_9 alkyl)nN(R10)2, -(C1_9 nN(R10)SOZR11 and - N(R1°)C(=0)R“.
14. The method of claim 10, wherein R7 is one tuent and is selected from the group consisting of halide, -OCF3, -CF3, -(C1_9 nN(R10)2, -(C1_9 alkyl)nN(R10)SOZR11 and - N(R10)C(=0)R“.
15. The method of claim 9, n R7 is one substituent and is selected from the group consisting of -OR10 and -C(=O)R11 where R11 is -N(R10)2, and each R10 is independently selected from the group consisting of H, methyl and -(C1-9 alkyl)ncarbocyclle8 where n is 0 and each R8 is l-2 substituents independently ed from H or halide.
16. The method of claim 10, wherein R7 is one substituent and is selected from the group ting of -OR10 and -C(=O)R11 where R11 is -N(R10)2, and each R10 is independently ed from the group consisting of H, methyl and -(C1-9 alkyl)ncarbocyclle8 where n is 0 and each R8 is 1-2 substituents independently selected from H or halide.
17. The method of claim 1, the compound having a structure selected from the group consisting of: WO 75858 WO 75858 Q Q (:1 R" \ka KI vim d WO 75858 0N3 0 4—) /
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