NZ733149A - Methods of treating hematological disorders, solid tumors, or infectious diseases using natural killer cells - Google Patents
Methods of treating hematological disorders, solid tumors, or infectious diseases using natural killer cellsInfo
- Publication number
- NZ733149A NZ733149A NZ733149A NZ73314915A NZ733149A NZ 733149 A NZ733149 A NZ 733149A NZ 733149 A NZ733149 A NZ 733149A NZ 73314915 A NZ73314915 A NZ 73314915A NZ 733149 A NZ733149 A NZ 733149A
- Authority
- NZ
- New Zealand
- Prior art keywords
- cells
- medium
- cell
- domain
- placental
- Prior art date
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Abstract
Provided herein are methods of treating a hematological disorder, a solid tumor, or an infectious disease in a subject in need thereof using natural killer cells in combination with a second agent, or using natural killer cells with genetic modifications for target specificity and/or homing specificity. ity.
Description
METHODS OF TREATING HEMATOLOGICAL ERS, SOLID , OR
INFECTIOUS DISEASES USING L KILLER CELLS
This application claims benefit of US. Provisional Patent Application No.
62/098,547, filed December 31, 2014, and US. ional Patent Application No. 62/139,952,
filed March 30, 2015, the disclosures of each of which are incorporated by nce herein in its
entirety.
l. FIELD
Provided herein are methods of treating a hematological disorder, a solid tumor, or an
ious disease in a subject in need thereof using natural killer cells in ation with a
second agent, or using natural killer cells with genetic modifications for target city and/or
homing specificity.
2. BACKGROUND
Natural killer (NK) cells are cytotoxic lymphocytes that constitute a major component
of the innate immune system.
NK cells are activated in response to interferons or macrophage-derived cytokines.
NK cells possess two types of surface receptors, labeled “activating receptors” and “inhibitory
receptors,” that l the cells’ cytotoxic activity.
Among other activities, NK cells play a role in the host rejection of tumors and have
been shown capable of killing virus-infected cells. Natural killer cells can become activated by
cells lacking, or displaying reduced levels of, major histocompatibility complex (MHC) proteins.
Activated and expanded NK cells and LAK cells from peripheral blood have been used in both
ex vivo therapy and in vivo treatment of patients having advanced cancer, with some success
against bone marrow related diseases, such as leukemia; breast cancer; and certain types of
lymphoma.
In spite of the advantageous ties ofNK cells in killing tumor cells and virus-
infected cells, there s a great need for developing more efficacious NK cells and more
efficacious therapeutic regimens that utilize NK cells.
3. SUMMARY OF THE INVENTION
The present invention provides methods of treating a disease (e.g., a hematological
disorder, a solid tumor, or an ious e) in a subject in need thereof, using natural killer
(NK) cells in combination with a second agent that can be used to treat the disease. Also
provided herein are methods of ng a disease (e.g., a hematological disorder, a solid tumor,
or an infectious disease) in a subject in need thereof, using NK cells with genetic modifications
(e.g., NK cells that comprise a chimeric antigen receptor (CAR) and/or a homing or) for
target specificity and/or homing city.
In one aspect, provided herein are methods of ng a cancer in a subject in need
thereof, comprising: (a) administering to said subject an isolated tion of natural killer
(NK) cells or a pharmaceutical composition thereof; and (b) administering to said subject a
second agent or a pharmaceutical composition thereof, wherein said second agent can be used to
treat said cancer. In a specific embodiment, said cancer is multiple myeloma.
In certain embodiments, the second agent is an antibody or antigen binding fragment
thereof that specifically binds to a tumor-associated antigen (TAA). In specific embodiments,
the antibody is a monoclonal antibody. In specific embodiments, the TAA is selected from the
group consisting of CD123, CLL-l, CD38, CS-l (also ed to as SLAM7, SLAMF7, CD319,
and CRACC), CD138, RORl, FAP, MUCl, PSCA, EGFRVIII, EPHAZ, and GD2. In a more
specific embodiment, the second agent is an antibody that binds to CS-l. In more c
embodiments, the second agent is elotuzumab (HuLuc63, Bristol Myers-Squibb/Abeie
humanized anti-CS-l monoclonal antibody).
In certain embodiments, the second agent is an antibody or n binding nt
thereof that specifically binds to a tumor microenvironment-associated antigen (TMAA). In
specific embodiments, the antibody is a monoclonal antibody. In specific embodiments, the
TMAA is selected from the group consisting of , EGF, PDGF, IGF, and bFGF.
In certain embodiments, the second agent is an antibody or antigen binding fragment
thereof that specifically binds to and antagonizes the activity of an immune checkpoint protein.
In specific embodiments, the antibody is a monoclonal dy. In specific embodiments, the
immune oint protein is selected from the group consisting of CTLA-4, PD-1, PD-Ll, PD-
L2, and LAG—3.
In certain embodiments, the second agent is a bispecific killer cell engager (BiKE).
In specific embodiments, the BiKE comprises a first single chain variable fragment (scFv) that
specifically binds to a TAA. In further specific embodiments, the TAA is selected from the
group consisting of CD123, CLL-l, CD38, CS-l, CD138, RORl, FAP, MUCl, PSCA,
EGFRvIII, EPHAZ, and GDZ. In specific embodiments, the BiKE comprises a second scFv that
specifically binds to CD16.
In certain embodiments, the second agent is an anti-inflammatory agent.
In certain embodiments, the second agent is an modulatory agent. In specific
embodiments, the second agent is lenalidomide or pomalidomide.
In certain embodiments, the second agent is a cytotoxic agent.
In certain embodiments, the second agent is a cancer vaccine.
In certain embodiments, the second agent is a chemotherapeutic.
In n embodiments, the second agent is an HDAC inhibitor. In other specific
ments, the second agent is romidepsin (ISTODAX®, Celgene).
In certain embodiments, the second agent is an siRNA.
In some embodiments, the isolated tion ofNK cells or a pharmaceutical
composition thereof is stered before the second agent or a pharmaceutical composition
thereof. In some embodiments, the isolated population ofNK cells or a pharmaceutical
composition thereof is administered after the second agent or a pharmaceutical composition
thereof. In other embodiments, the isolated population ofNK cells or a ceutical
composition thereof is administered at the same time as the second agent or a pharmaceutical
composition thereof.
In specific ments, the step of administering to said subject an isolated
population ofNK cells or a pharmaceutical composition thereof is by injection, infusion,
intravenous (IV) administration, intrafemoral administration, or intratumor administration. In
specific embodiments, the step of administering to said subject an isolated population ofNK
cells or a pharmaceutical composition f is performed with a devise, a matrix, or a scaffold.
In specific embodiments, the step of administering to said subject an ed population ofNK
cells or a pharmaceutical composition thereof is by injection. In specific embodiments, the
injection ofNK cells is local injection. In more specific ments, the local injection is
directly into a solid tumor (e.g., a sarcoma). In specific ments, stration ofNK cells
is by injection by syringe. In specific embodiments, administration ofNK cells by injection is
aided by laparoscopy, endoscopy, ultrasound, computed tomography, magnetic resonance, or
radiology.
In specific embodiments, the step of administering to said subject a second agent or a
ceutical composition thereof is by injection, infusion, intravenous (IV) stration,
intrafemoral administration, or intratumor administration. In specific embodiments, the step of
administering to said subject a second agent or a pharmaceutical composition thereof is
performed with a devise, a matrix, or a scaffold.
In various embodiments, the NK cells are fucosylated on the cell surface.
In some ments, the isolated population ofNK cells or a pharmaceutical
composition f is administered in a single dose. In other embodiments, the isolated
population ofNK cells or a pharmaceutical composition thereof is administered in multiple
doses.
In some embodiments, the second agent or a pharmaceutical composition thereof is
administered in a single dose. In other embodiments, the second agent or a ceutical
composition thereof is administered in le doses.
In another aspect, provided herein are methods of treating a cancer in a t in
need f, comprising administering to said subject an isolated population ofNK cells or a
pharmaceutical composition thereof, wherein the NK cells comprise a chimeric antigen receptor
(CAR), wherein said CAR comprises an extracellular domain, a transmembrane domain, an
intracellular stimulatory , and optionally a co-stimulatory domain. Also provided herein
are methods of treating a cancer in a subject in need thereof, comprising stering to said
subject an isolated population ofNK cells or a pharmaceutical composition thereof, wherein the
NK cells comprise a homing receptor, and methods of treating a cancer in a subject in need
thereof, comprising administering to said subject an ed population of Natural Killer (NK)
cells or a pharmaceutical composition thereof, wherein the NK cells comprise a chimeric antigen
or (CAR) and a homing receptor, wherein said CAR comprises an extracellular , a
transmembrane domain, an intracellular stimulatory , and optionally a co-stimulatory
domain. In various ments, the CAR comprises an extracellular domain, a transmembrane
domain, an intracellular stimulatory domain, and a co-stimulatory domain.
In specific embodiments, the NK cells comprising the CAR and/or the homing
receptor are derived from CD34+ hematopoietic stem cells (HSCs) that are engineered to express
the CAR and/or the homing receptor.
In various ments, the extracellular domain of the CAR is an antigen binding
domain. In specific embodiments, the antigen binding domain is an scFv domain. In certain
embodiments, the antigen binding domain cally binds to a TAA. In specific embodiments,
the TAA is selected from the group consisting of CD123, CLL-l, CD38, CD20, and CS-l. In
more specific embodiments, the antigen-binding domain comprises a single—chain Fv (scFv) or
antigen-binding fragment derived from an antibody that binds CS-l. In more specific
embodiments, the antigen-binding domain comprises a single-chain version of elotuzumab
and/or an antigen-binding fragment of elotuzumab, In specific embodiments, the n-
binding domain comprises a -chain Fv (scFv) or antigen-binding fragment derived from an
antibody that binds CD20
In various embodiments, the intracellular stimulatory domain of the CAR is a CD3
zeta ing domain.
In various embodiments, the co-stimulatory domain of the CAR comprises the
ellular domain of CD28, 4-1BB, PD-l, 0X40, CTLA-4, NKp46, NKp44, NKp30, DAP10
or DAPl2.
In various embodiments, the homing receptor is a actic receptor. In specific
embodiments, the chemotactic receptor is selected from the group ting of CXCR4,
VEGFR2, and CCR7.
In one embodiment, provided herein is a method of treating an individual having
multiple myeloma, comprising administering to the individual (1) lenalidomide or pomalidomide
and (2) NK cells that comprise a CAR (“CAR NK cells”), wherein said CAR NK cells are
effective to treat multiple myeloma in said dual. In specific embodiments of the method of
treating an individual with multiple myeloma, said CAR NK cells comprise a CAR extracellular
domain, which extracellular domain is a CS-l binding domain. In specific embodiments, the
CS-l g domain comprises an scFv or antigen-binding fragment of an dy that binds
CS-l. In certain specific embodiments, the CS-l binding domain comprises a single-chain
version of elotuzumab and/or an antigen-binding nt of umab.
In another embodiment, provided herein is a method of treating an individual having
multiple myeloma, comprising administering to the individual (1) domide or
pomalidomide; (2) elotuzumab; and (3) CAR NK cells, wherein said CAR NK cells are effective
to treat multiple myeloma in said individual. In certain specific embodiments of the method of
treating an dual with multiple myeloma, said CAR NK cells comprise a CAR extracellular
domain, which extracellular domain is a CS-l binding domain. In specific embodiments, the
CS-l binding domain comprises an scFv or antigen-binding fragment of an antibody that binds
CS-l.
In r embodiment, provided herein is a method of treating an individual having
a blood cancer (e.g., Burkitt’s lymphoma), comprising administering to the individual (1)
romidepsin and (2) CAR NK cells, wherein said CAR NK cells are effective to treat the blood
cancer (e.g., Burkitt’s lymphoma) in said individual. In certain specific embodiments of the
method of treating an individual with blood cancer (e.g., Burkitt’s lymphoma), said CAR NK
cells comprise a CAR extracellular , which extracellular domain is a CD20 binding
domain. In specific ments, the CD20 binding domain comprises an scFv or antigen-
binding fragment of an antibody that binds CD20.
In specific embodiments, the step of administering to said subject an isolated
tion ofNK cells or a pharmaceutical composition thereof is by injection, infusion,
intravenous (IV) administration, intrafemoral administration, or intratumor administration. In
ic embodiments, the step of administering to said subject an isolated population ofNK
cells or a ceutical ition f is performed with a devise, a matrix, or a ld,
In specific embodiments, the step of administering to said subject an isolated population ofNK
cells or a pharmaceutical composition thereof is by injection. In specific embodiments, the
injection ofNK cells is local injection. In more specific embodiments, the local injection is
directly into a solid tumor (e.g., a sarcoma). In specific embodiments, administration ofNK cells
is by injection by syringe. In specific embodiments, administration ofNK cells by injection is
aided by laparoscopy, endoscopy, ound, computed tomography, magnetic nce, or
radiology.
[003 6] In various embodiments, the NK cells are fucosylated on the cell surface.
[003 7] In some embodiments, the isolated population ofNK cells or a pharmaceutical
composition thereof is administered in a single dose. In other embodiments, the ed
population ofNK cells or a pharmaceutical composition thereof is administered in multiple
doses.
In another aspect, ed herein are methods of treating a viral infection in a
subject in need thereof, comprising: (a) stering to said subject an isolated tion of
natural killer (NK) cells or a pharmaceutical composition thereof, and (b) administering to said
subject a second agent or a pharmaceutical composition thereof, wherein said second agent can
be used to treat said viral infection.
In certain ments, the second agent is an antibody or antigen binding fragment
thereof that specifically binds to and antagonizes the activity of an immune checkpoint protein.
In specific embodiments, the antibody is a monoclonal antibody. In specific embodiments, the
immune checkpoint protein is selected from the group ting of CTLA-4, PD-l, PD-Ll, PD-
L2, and LAG—3.
In certain embodiments, the second agent is a bispeciflc killer cell engager (BiKE).
In some embodiments, the isolated population ofNK cells or a pharmaceutical
composition thereof is administered before the second agent or a pharmaceutical composition
thereof. In some embodiments, the isolated population ofNK cells or a pharmaceutical
composition thereof is administered after the second agent or a pharmaceutical composition
thereof. In other embodiments, the isolated population ofNK cells or a ceutical
composition thereof is administered at the same time as the second agent or a ceutical
ition thereof.
In specific embodiments, the step of administering to said subject an isolated
population ofNK cells or a pharmaceutical composition thereof is by injection, infusion,
intravenous (IV) administration, intrafemoral administration, or intratumor administration. In
ic embodiments, the step of administering to said subject an isolated tion ofNK
cells or a pharmaceutical ition thereof is med with a devise, a matrix, or a scaffold.
In specific embodiments, the step of administering to said subject an isolated population ofNK
cells or a pharmaceutical composition thereof is by injection. In specific embodiments, the
injection ofNK cells is local injection. In more specific embodiments, the local injection is
directly into a solid tumor (e.g., a sarcoma). In specific embodiments, administration ofNK cells
is by injection by e. In specific embodiments, administration ofNK cells by injection is
aided by laparoscopy, endoscopy, ultrasound, computed aphy, magnetic resonance, or
radiology.
In specific embodiments, the step of administering to said subject a second agent or a
pharmaceutical composition thereof is by injection, on, intravenous (IV) administration,
intrafemoral stration, or intratumor administration. In specific embodiments, the step of
administering to said subject a second agent or a pharmaceutical composition thereof is
WO 09668
performed with a devise, a matrix, or a scaffold.
In various embodiments, the NK cells are fucosylated on the cell surface.
In some embodiments, the isolated population ofNK cells or a pharmaceutical
composition thereof is administered in a single dose. In other ments, the ed
population ofNK cells or a pharmaceutical composition thereof is administered in multiple
doses.
In some embodiments, the second agent or a pharmaceutical ition thereof is
administered in a single dose. In other ments, the second agent or a pharmaceutical
composition thereof is administered in multiple doses.
In another aspect, provided herein are methods of treating a viral infection in a
subject in need f, comprising administering to said t an isolated population ofNK
cells or a pharmaceutical composition f, wherein the NK cells comprise a chimeric antigen
receptor (CAR), wherein said CAR ses an extracellular domain, a transmembrane domain,
an intracellular stimulatory domain, and optionally a co-stimulatory domain. Also provided
herein are methods of treating a viral infection in a subject in need thereof, comprising
administering to said subject an isolated population ofNK cells or a pharmaceutical composition
thereof, wherein the NK cells comprise a homing receptor, and methods of treating a viral
ion in a subject in need thereof, comprising administering to said subject an isolated
population of Natural Killer (NK) cells or a pharmaceutical composition thereof, wherein the NK
cells comprise a chimeric antigen receptor (CAR) and a homing receptor, wherein said CAR
comprises an extracellular domain, a transmembrane domain, an intracellular stimulatory
, and optionally a co-stimulatory domain. In various embodiments, the CAR ses
an extracellular domain, a transmembrane , an ellular stimulatory domain, and a co-
stimulatory domain.
In specific embodiments, the NK cells comprising the CAR and/or the homing
receptor are derived from CD34+ hematopoietic stem cells (HSCs) that are engineered to express
the CAR and/or the homing receptor.
In various embodiments, the extracellular domain of the CAR is an antigen binding
domain. In specific embodiments, the antigen binding domain is an scFv domain.
In various embodiments, the intracellular stimulatory domain of the CAR is a CD3
zeta signaling domain.
In various embodiments, the co-stimulatory domain of the CAR comprises the
intracellular domain of CD28, 4-1BB, PD-l, 0X40, , NKp46, NKp44, NKp30, DAPIO
or DAP12.
In various embodiments, the homing receptor is a actic receptor. In specific
embodiments, the chemotactic receptor is selected from the group consisting of CXCR4,
VEGFR2, and CCR7.
In specific embodiments, the step of administering to said subject an isolated
tion ofNK cells or a pharmaceutical composition thereof is by injection, infusion,
intravenous (IV) administration, intrafemoral administration, or umor administration. In
specific embodiments, the step of administering to said subject an isolated population ofNK
cells or a pharmaceutical composition thereof is performed with a devise, a matrix, or a scaffold.
In specific embodiments, the step of administering to said subject an isolated population ofNK
cells or a pharmaceutical composition thereof is by injection. In c embodiments, the
injection ofNK cells is local ion. In more specific embodiments, the local injection is
directly into a solid tumor (e.g, a sarcoma). In specific embodiments, administration ofNK cells
is by injection by syringe. In specific embodiments, administration ofNK cells by injection is
aided by laparoscopy, endoscopy, ultrasound, computed tomography, magnetic resonance, or
ogy.
In various embodiments, the NK cells are fucosylated on the cell surface.
[005 5] In some embodiments, the isolated population ofNK cells or a ceutical
composition thereof is administered in a single dose. In other embodiments, the isolated
population ofNK cells or a pharmaceutical composition thereof is administered in multiple
doses.
The present ion also provides kits for treating a disease (e.g, a hematological
disorder, a solid tumor, or an infectious disease) in a subject in need thereof, which comprise an
ed population ofNK cells and a second agent that can be used to treat the disease.
In one aspect, provided herein are kits for treating a cancer in a subject in need
thereof, comprising: (a) an isolated population ofNK cells or a ceutical composition
thereof; and (b) a second agent or a pharmaceutical composition thereof, wherein said second
agent can be used to treat said . The second agent can be any that may be used in the
methods of treating a cancer as provided above.
[005 8] In another , ed herein are kits for treating a viral infection in a subject in
need thereof, comprising: (a) an isolated population ofNK cells or a pharmaceutical composition
thereof; and (b) a second agent or a pharmaceutical composition thereof, wherein said second
agent can be used to treat said viral infection. The second agent can be any that may be used in
the methods of treating a viral ion as provided above.
In various embodiments of the methods or kits provided herein, the NK cells are
placental intermediate natural killer (PiNK) cells. In certain embodiments, the PiNK cells are
derived from placental cells. In specific embodiments, the placental cells are obtained from
tal perfusate. In specific embodiments, the placental cells are obtained from placental
tissue that has been mechanically and/or enzymatically disrupted.
In various embodiments of the methods or kits provided herein, the NK cells are
ted NK cells. In certain embodiments, the activated NK cells are produced by a process
comprising: (a) seeding a tion of hematopoietic stem or progenitor cells in a first medium
comprising interleukin-15 (IL-15) and, optionally, one or more of stem cell factor (SCF) and
interleukin-7 (IL-7), wherein said IL-15 and optional SCF and IL-7 are not sed within an
undefined component of said medium, such that the population expands, and a plurality of
hematopoietic stem or itor cells within said population of hematopoietic stem or
progenitor cells differentiate into NK cells during said expanding; and (b) expanding the cells
from the step (a) in a second medium comprising interleukin-2 (IL-2), to produce a population of
activated NK cells. In certain embodiments, the activated NK cells are ed by a process
comprising: expanding a population of hematopoietic stem or progenitor cells in a first medium
comprising one or more of stem cell factor (SCF), interleukin-7 (IL-7) and interleukin-15 (IL-
), and wherein said SCF, IL-7 and IL-15 are not comprised within an undefined component of
said medium, and wherein a plurality of hematopoietic stem or progenitor cells within said
population of hematopoietic stem or progenitor cells differentiate into NK cells during said
expanding, and wherein a second step of said method comprises expanding the cells from the
first step in a second medium comprising interleukin-2 (IL-2), to e activated NK cells.
In specific embodiments, the first medium further comprises one or more of Fms-
yrosine kinase 3 ligand (Flt3 -L), thrombopoietin (Tpo), interleukin-2 (IL-2), or heparin. In
further specific embodiments, the first medium further comprises fetal bovine serum or human
serum. In r specific embodiments, the SCF is t at a concentration of about 1 to about
150 ng/mL in the first medium. In further specific embodiments, the Flt3 -L is present at a
tration of about 1 to about 150 ng/mL in the first medium. In further specific
embodiments, the IL-2 is present at a concentration of about 50 to about 1500 IU/mL in the first
medium. In further specific embodiments, the IL-7 is present at a concentration of about 1 to
about 150 ng/mL in the first medium. In further specific embodiments, the IL-15 is t at a
concentration 1 to about 150 ng/mL in the first medium. In further specific embodiments, the
Tpo is present at a tration of about 1 to about 150 ng/mL in the first medium. In further
specific embodiments, the heparin is present at a concentration of about 0.1 to about 30 U/mL in
the first medium.
In specific embodiments, said IL-2 in the second step above is present at a
concentration 50 to about 1500 IU/mL in the second medium.
In specific embodiments, said second medium additionally comprises one or more of
fetal calf serum (FCS), transferrin, insulin, ethanolamine, oleic acid, linoleic acid, ic acid,
bovine serum albumin (B SA) and emagglutinin.
In specific embodiments, the hematopoietic stem or progenitor cells are CD34+.
In specific embodiments, the hematopoietic stem or progenitor cells comprise
hematopoietic stem or progenitor cells from human placental perfusate and hematopoietic stem
or progenitor cells from umbilical cord, wherein said placental perfusate and said umbilical cord
blood are from the same placenta.
In specific embodiments, the feeder cells in step (b) above se mitomycin C-
treated peripheral blood mononuclear cells (PBMC), K562 cells or tissue culture-adherent stem
cells.
In specific embodiments, the NK cells are CD3‘CD56+CD16_, In a further specific
ment, the I\K cells are additionally CD94+CD117+. In another further specific
embodiment, the I\K cells are additionally CD161‘. In another further specific embodiment, the
NK cells are additionally NKG2D+. In another further specific ment, the NK cells are
additionally NKp46+. In another further specific embodiment, the NK cells are additionally
CD226+.
In various embodiments of the s or kits provided herein, the NK cells are
Three—Step s NK (TSPNK) cells. In specific embodiments, the TSPNK cells are NK
progenitor cells. In n embodiments, the TSPNK cells are ed by a process
comprising: (a) culturing hematopoietic stem cells or progenitor cells in a first medium
comprising Flt3L, TPO, SCF, IL-7, G—CSF, IL—6 and GM-CSF; (b) subsequently culturing said
cells in a second medium comprising Flt3L, SCF, IL-15, and IL-7, IL-17 and IL-15, G—CSF, IL-6
and GM —CSF; and (c) subsequently culturing said cells in a third medium comprising SCF, IL-
, IL—7, IL-2, G—CSF, IL-6 and GM-CSF.
In specific embodiments, the duration of culturing step (a) is 7-9 days, the duration of
ing step (b) is 5—7 days, and the duration of culturing step (c) is 5-9 days. In c
embodiments, the duration of ing step (a) is 7-9 days, the duration of culturing step (b) is 5-
7 days, and the duration of culturing step (c) is 21-35 days.
In specific ments, the hematopoietic stem or progenitor cells used in the
process are CD34+.
In specific embodiments, the hematopoietic stem or itor cells comprise
hematopoietic stem or progenitor cells from human placental perfusate and hematopoietic stem
or progenitor cells from umbilical cord, wherein said placental perfusate and said umbilical cord
blood are from the same placenta.
In specific embodiments, CD34- cells comprise more than 80% of the TSPNK cells at
the end of step (a) of the process of producing TSPNK cells above.
In specific embodiments, the TSPNK cells comprise no more than 40% CD3- CD56+
cells.
In specific embodiments, the TSPNK cells comprise cells which are CD52+ CD1 17+.
In various embodiments of the methods or kits bed herein, the NK cells are
produced by a process comprising: (a) culturing hematopoietic stem or progenitor cells in a first
medium comprising a stem cell mobilizing agent and thrombopoietin (Tpo) to produce a first
tion of cells; (b) culturing the first population of cells in a second medium comprising a
stem cell mobilizing agent and interleukin-15 (IL-15), and lacking Tpo, to produce a second
population of cells; and (c) ing the second tion of cells in a third medium comprising
IL-2 and IL-15, and lacking a stem cell mobilizing agent and LMWH, to produce a third
population of cells; wherein the third population of cells comprises natural killer cells that are
CD56+, CD3-, CD16— or CDl6+, and CD94+ or CD94-, and wherein at least 80% of the natural
killer cells are Viable.
The cancer in any one of the methods or kits provided herein can be a hematological
cancer or a solid tumor.
In preferred embodiment of any one of the methods or kits provided herein, the
t is a human.
3.1. Terminology
As used herein, “natural killer cell” or “NK cells” without r modification,
includes natural killer cells derived from any tissue , and include mature l killer cells
as well as natural killer progenitor cells. In some embodiments, NK cells are placental
intermediate l killer (PiNK) cells as described in Section 5.1.1. In some embodiments, NK
cells are ted NK cells as described in Section 5.1.2. In some embodiments, NK cells are
Three—Step Process NK (TSPNK) cells as described in Section 513 Natural killer cells can be
derived from any tissue source, and include mature natural killer cells as well as NK progenitor
cells.
As used herein, the term “NK progenitor cell population” refers to a population of
cells comprising cells of the natural killer cell lineage that have yet to develop into mature NK
cells, as ted by, e.g., the level(s) of expression one or more phenotypic markers, e.g.,
CD56, CD16, and KIRs. In one embodiment, the NK progenitor cell population comprises cells
with low CD16 and high CD56.
As used herein, “PiNK” and “PiNK cells” refer to placental intermediate natural killer
cells that are obtained from human placenta, e.g., human placental perfusate or placental tissue
that has been mechanically and/or enzymatically disrupted. The cells are CD56+ and CD16‘,
e. g., as determined by flow cytometry, e.g., cence-activated cell sorting using antibodies
to CD56 and CD16.
As used herein, “placental perfusate” means perfusion on that has been passed
through at least part of a placenta, e.g., a human placenta, e.g., through the placental vasculature,
and includes a ity of cells collected by the perfusion solution during passage through the
placenta.
As used herein, “placental perfusate cells” means nucleated cells, e.g., total nucleated
cells, ed from, or isolatable from, placental perfusate.
As used herein, “feeder cells” refers to cells of one type that are co—cultured with cells
of a second type, to provide an environment in which the cells of the second type can be
2015/068069
maintained, and perhaps proliferate. Without being bound by any theory, feeder cells can
provide, for e, peptides, ptides, electrical signals, organic molecules (e.g.,
steroids), nucleic acid molecules, growth factors (e.g., bFGF), other factors (e.g., cytokines), and
metabolic nutrients to target cells. In certain embodiments, feeder cells grow in a mono-layer.
As used herein, the term “hematopoietic cells” includes hematopoietic stem cells and
hematopoietic itor cells.
As used herein, the “undefined component” is a term of art in the culture medium
field that refers to components whose constituents are not generally provided or quantified.
Examples of an “undefined component” include, without limitation, human serum (e.g., human
serum AB) and fetal serum (e.g, fetal bovine serum or fetal calf serum).
As used herein, “+”, when used to indicate the presence of a particular cellular
marker, means that the cellular marker is detectably present in fluorescence activated cell g
over an isotype control, or is detectable above background in quantitative or semi-quantitative
As used herein, “—”, when used to indicate the presence of a particular cellular
marker, means that the cellular marker is not detectably present in fluorescence ted cell
sorting over an isotype control, or is not detectable above background in quantitative or semi-
quantitative RT-PCR.
As used herein, “cancer” refers to a hematological cancer or a solid tumor.
4. BRIEF DESCRIPTION OF S
Fig. 1 depicts the antibody-dependent cellular cytotoxicity (ADCC) activities of
PiNK cells against Daudi cells at ent trations of rituximab.
Fig. 2 depicts the expression of PD-Ll and CS-l on the MM cells lines MM285,
MMZ93, RPM18226, and OPM2. Cells were stained with D-Ll APC (Biolegend, Cat#
), anti-CS1 PE—Cy7 (Biolegend, Cat# 331816), and 7-AAD (BD Bioscience, Cat#
559925) according to the manufacturer’s protocol. Data were acquired on BD LSRFortessa (BD
Biosciences) and analyzed using FLOWJO® re (Tree Star). Data were expressed as %
positive cells gated under 7—AAD- single cells. Setting of the % positive gate was done using
unstained sample as control. The left—most peak in the panels indicates the control, whereas the
right-most peak indicates the sample. The percentage of cells positive for PD-Ll was as follows:
71.6% MIVI285, 70.7% MM293, 66.2% OPM-2, and 94.4% RPMI8226. The percentage of cells
positive for CS—l was as follows: 31.8% MMZSS, 58.8% MM293, 93.4% OPM-2, and 29.5%
RPM18226.
Fig. 3 depicts the 24-hour cytotoxicity assay of three-stage NK cells against the
indicated MM cell lines and primary MM samples at a 3:1 effector-to-target ratio. The number
of viable target cells (PKH26+TO-PRO-3') in each sample was quantified by flow cytometry
using ng beads following the protocol provided by the manufacturer (Invitrogen, Cat#
C3 6950). Counting beads were introduced in this assay in order to account for any ial
proliferation of tumor cells during the prolonged 24 hour culture After incubation for 24 hours
at 37° C and 5% C02, cells were harvested, followed by staining with 1 uM TO-PRO-3 to
identify the dead cells. Results are depicted as mean i rd deviation of the mean.
Fig. 4 depicts the 24-hour cytotoxicity assay of three-stage NK cells against OPM2
cells at a 3:1 effector-to—target ratio, along with the following additional conditions: IL-15 (5
ng/mL) (Invitrogen, Cat# PHC9153); IL-2 (200 IU/mL) (Invitrogen, Cat# PHC0023), anti-PD-
L1 (lOng/mL) (Affymetrix, Cat# 1682), anti-IgG(10ng/mL) (AffymetriX, Cat# 16
82); REVLIMID® (lenalidomide, luM), or DMSO (0.1%) in 48-well . Target cells alone
were plated as controls. After incubation for 24 hours at 37° C and 5% C02, cells were
ted, followed by staining with 1 uM TO-PRO-3 to identify the dead cells. Results are
depicted as mean :: standard deviation of the mean.
. DETAILED DESCRIPTION
Provided herein are methods of ng a disease (e.g., a hematological disorder, a
solid tumor, or an ious disease) in a subject in need thereof, using natural killer (NK) cells
in combination with a second agent that can be used to treat the disease. Also provided herein
are methods of treating a disease (e.g., a hematological disorder, a solid tumor, or an infectious
disease) in a t in need thereof, using NK cells with genetic modifications (e.g., NK cells
that comprise a chimeric antigen receptor (CAR) and/or a homing receptor) for target specificity
and/or homing city. Kits for treating a disease (e.g., a logical disorder, a solid
tumor, or an infectious e) in a subject in need thereof, which comprise an isolated
population ofNK cells and a second agent that can be used to treat the disease, or which
comprise an isolated population ofNK cells with c modifications (e.g, NK cells that
se a chimeric antigen receptor (CAR) and/or a homing receptor) are also provided herein.
2015/068069
.1. NK Cells
bed herein are NK cells, including PiNK cells, activated NK cells, TSPNK
cells, and NK cells produced by the three-stage method.
.1.1. Placental Intermediate Natural Killer (PiNK) Cells
In some embodiments, natural killer cells are placental intermediate natural killer
(PiNK) cells (see also US. Patent No. 8,263,065, the disclosure of which is hereby orated
by reference in its entirety). In various embodiments, PiNK cells are derived from placental
cells. In specific embodiments, the placental cells are obtained from placental perfusate, e.g.,
human placental perfusate. In specific embodiments, the placental cells are obtained from
tal tissue that has been mechanically and/or enzymatically disrupted.
PiNK cells are characterized as being CD56+CD16_, 1'.e., ying the CD56 cellular
marker and lacking the CD16 cellular marker, e.g., as determined by flow cytometry, e.g,
fluorescence-activated cell sorting using antibodies against CD16 and CD56, as described above.
In n embodiments, the PiNK cells are CD3‘.
In other embodiments, the PiNK cells do not exhibit one or more ar markers
exhibited by fully mature natural killer cells (e.g., CD16), or t such one or more markers at
a detectably reduced level ed to fully mature natural killer cells, or exhibit one or more
cellular markers associated with natural killer cell precursors but not fully mature natural killer
cells. In a specific embodiment, a PiNK cell described herein expresses NKGZD, CD94 and/or
NKp46 at a ably lower level than a fully mature NK cell. In another specific embodiment,
a plurality of PiNK cells bed herein expresses, in total, NKGZD, CD94 and/or NKp46 at a
detectably lower level than an equivalent number of fully mature NK cells.
In certain embodiments, PiNK cells express one or more of the microRNAs hsa—miR—
100, hsa-miR—127, hsa-miR—Zl l, hsa—miR-302c, hsa—miR-326, hsa-miR-337, hsa-miR-497, hsa-
miR3p, hsa-miR5p, hsa-miR-517b, hsa-miR-517c, hsa-miR-518a, hsa-miR-518e, hsa-
miR-5l9d, R-520g, hsa—miR-520h, R-564, hsa—miR-566, hsa-miR-6l8, and/or hsa-
miR—99a at a detectably higher level than peripheral blood natural killer cells.
Because the post-partum placenta comprises tissue and cells from the fetus and from
the mother placental perfusate, depending upon the method of collection, PiNK cells can
comprise fetal cells only, or a substantial majority of fetal cells (e.g, greater than about 90%,
95%, 98% or 99%), or can comprise a mixture of fetal and maternal cells (e.g., the fetal cells
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comprise less than about 90%, 80%, 70%, 60%, or 50% of the total nucleated cells of the
perfusate). In one embodiment, the PiNK cells are derived only from fetal placental cells, e.g,
cells obtained from -circuit perfusion of the placenta (see above) wherein the perfusion
produces perfusate comprising a substantial majority, or only, fetal placental cells. In another
embodiment, the PiNK cells are derived from fetal and maternal cells, e.g., cells ed by
perfusion by the pan method (see above), n the perfusion produced perfusate comprising a
mix of fetal and maternal placental cells. Thus, in one ment, the NK cells are a
population of placenta-derived intermediate natural killer cells, the substantial majority of which
have the fetal genotype. In another embodiment, the NK cells are a population of placenta—
derived ediate natural killer cells that comprise natural killer cells having the fetal
genotype and l killer cells having the maternal phenotype.
.1.2. Activated NK Cells
In some embodiments, l killer cells are activated NK cells (1'. e., Two-Step NK
cells, or TSNK cells) (see also U. S. Patent ation Publication No. 2012/0148553, the
disclosure of which is hereby incorporated by reference in its entirety), which are NK cells
produced by any method/process described below in Section 5.2.4.
In a specific embodiment, the activated NK cells are CD3‘CD56+. In a specific
ment, the activated NK cells are CD3‘CD56+CD16_. In another specific embodiment, the
ted I\K cells are additionally CD94+CD117+. In another specific embodiment, the
activated I\K cells are additionally CD161‘. In another specific embodiment, the activated NK
cells are additionally NKG2D+. In another specific embodiment, the activated NK cells are
additionally NKp46+. In another specific embodiment, the activated NK cells are additionally
CD226]
In certain embodiments, greater than 50%, 60%, 70%, 80%, 90%, 92%, 94%, 96%,
98% of said activated NK cells are CD56+ and CD16‘. In other embodiments, at least 50%,
60%, 70%, 80%, 82%, 84%, 86%, 88% or 90% of said activated NK cells are CD3‘ and CD56+.
In other embodiments, at least 50%, 52%, 54%, 56%, 58% or 60% of said activated NK cells are
NKG2D+. In other embodiments, fewer than 30%, 20%, 10%, 9%, 8%, 7%, 6%, 5%, 4% or 3%
of said cells are NKB1+. In certain other ments, fewer than 30%, 20%, 10%, 8%, 6%,
4% or 2% of said activated NK cells are NKAT2+. In certain other embodiments, fewer than
%, 20%, 10%, 8%, 6%, 4% or 2% of said activated NK cells are CD56+ and CD16+. In more
specific embodiments, at least 10%, 20%, 25%, 30%, 35%, 40%, 50%, 55%, 60%, 65% or 70%
of said CD3‘, CD56+ activated NK cells are NKp46+. In other more specific embodiments, at
least 10%, 20%, 25%, 30%, 35%, 40%, 50%, 55%, 60%, 65%, 70%, 75%, 80% or 85% of said
CD3‘, CD56" activated NK cells are CD117+. In other more specific embodiments, at least 10%,
%, 25%, 30%, 35%, 40%, 45% or 50% of said CD3‘, CD56+ activated NK cells are CD94+.
In other more specific embodiments, at least 10%, 20%, 25%, 30%, 35%, 40%, 45% or 50% of
said CD3‘, CD56+ activated NK cells are CD161‘. In other more specific embodiments, at least
%, 12%, 14%, 16%, 18% or 20% of said CD3‘, CD56+ activated NK cells are CD226+. In
more specific embodiments, at least 20%, 25%, 30%, 35% or 40% of said CD3‘, CD56+
activated NK cells are CD7+. In more c embodiments, at least 30%, 35%, 40%, 45%,
50%, 55% or 60% of said CD3‘, CD56+ activated NK cells are CD5+.
Activated NK cells can have a fetal genotype or a maternal genotype. For example,
because the artum placenta, as a source of hematopoietic cells suitable for producing
activated NK cells, comprises tissue and cells from the fetus and from the mother, placental
perfusate can comprise fetal cells only, or a substantial majority of fetal cells (e.g., r than
about 90%, 95%, 98% or 99%), or can comprise a mixture of fetal and maternal cells (e.g., the
fetal cells comprise less than about 90%, 80%, 70%, 60%, or 50% of the total nucleated cells of
the perfusate). In one embodiment, the ted NK cells are derived only from fetal placental
hematopoietic cells, e.g., cells obtained from closed-circuit perfusion of the placenta wherein the
perfusion produces perfusate comprising a ntial majority, or only, fetal placental
hematopoietic cells. In another embodiment, the activated NK cells are d from fetal and
al cells, e.g., cells obtained by perfusion by the pan method (see above), wherein the
perfusion produced perfusate comprising a mix of fetal and maternal placental cells. Thus, in
one embodiment, the activated NK cells are derived from a population of placenta-derived
intermediate natural killer cells, the substantial majority of which have the fetal genotype. In
another embodiment, the activated NK cells are derived from a population of placenta-derived
intermediate l killer cells that comprise natural killer cells having the fetal genotype and
natural killer cells having the maternal ype.
In certain ments, the activated NK cells or populations enriched for activated
NK cells can be assessed by detecting one or more functionally relevant markers, for example,
CD94, CD161, NKp44, DNAM-l, 2B4, NKp46, CD94, KIR, and the NKG2 family of activating
receptors (e.g, NKGZD).
ally, the xic activity of isolated or enriched natural killer cells can be
assessed, e.g., in a cytotoxicity assay using tumor cells, e.g., cultured K562, LN-18, U937,
WERI-RB-l, U-1 18MG, HT-29, HCC2218, KG—l, or U266 tumor cells, or the like as target
cells.
.1.3. Three-Step Process NK (TSPNK) Cells
In some ments, natural killer cells are Three-Step Process NK (TSPNK) cells,
which are NK cells produced by any method/process described below in Section 5.2.5. In
specific embodiments, the TSPNK cells are NK progenitor cells (see also U. S. Patent
Application Publication No. 2012/0148553, the disclosure of which is hereby incorporated by
reference in its ty).
.1.3.1. TSPNK Cells
In one embodiment, said isolated TSPNK cell population produced by a three-step
process described herein comprises a greater percentage of CD3—CD56+ cells than an NK
progenitor cell population produced by a three-step process described herein, e.g., an NK
progenitor cell population produced by the same three-step process with the exception that the
third culture step used to produce the NK progenitor cell population was of r duration than
the third culture step used to produce the TSPNK cell tion. In a specific embodiment, said
TSPNK cell population comprises about 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, or 99%
CD3—CD56+ cells. In another specific embodiment, said TSPNK cell population comprises no
less than 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, or 99% CD3—CD56+ cells. In another
specific embodiment, said TSPNK cell tion comprises between 65%-70%, 70%-75%,
75%-80%, 80%-85%, 85%-90%, %, or 95%-99% CD3—CD56+ cells. In r specific
embodiment, said TSPNK cell population produced by a three-step process bed herein is
produced using a three-step process that ses a long third culture step, e.g., a third culture
step of 18-20, 19-21, 20-22, or 21-23 days.
In certain embodiments, said CD3‘CD56Jr cells in said TSPNK cell population
comprises CD3‘CD56+ cells that are additionally CD117+, n said TSPNK cell population
comprises a lesser percentage of CD3‘CD56+CD117+ cells than an NK progenitor cell
population produced by a three-step process described herein, e.g., an NK progenitor cell
population produced by the same three-step process with the ion that the third culture step
used to produce the NK progenitor cell population was of shorter on than the third culture
step used to produce the TSPNK cell population.
In certain embodiments, said 56+ cells in said TSPNK cell population
comprises CD3‘CD56+ cells that are onally CD161+, wherein said TSPNK cell population
comprises a lesser tage of CD3‘CD56+CD161+ cells than an NK itor cell
population produced by a three-step process described herein, e.g., an NK progenitor cell
population produced by the same three-step process with the exception that the third culture step
used to produce the NK progenitor cell population was of shorter duration than the third culture
step used to produce the TSPNK cell population.
In certain embodiments, said CD3‘CD56+ cells in said TSPNK cell population
comprises CD3‘CD56+ cells that are onally NKp46+, wherein said TSPNK cell population
comprises a greater percentage of CD3'CD56WKp46+ cells than an NK progenitor cell
population produced by a step process described herein, e.g., an NK itor cell
tion produced by the same three-step process with the exception that the third culture step
used to produce the NK progenitor cell population was of shorter duration than the third culture
step used to produce the TSPNK cell population.
In certain embodiments, said CD3‘CD56+ cells in said TSPNK cell tion
comprises CD3‘CD56+ cells that are additionally CD16-, n said TSPNK cell population
comprises a greater percentage of 56+CD16- cells than an NK progenitor cell population
produced by a three-step process described herein, e.g., an NK progenitor cell population
produced by the same three-step process with the exception that the third culture step used to
produce the NK itor cell population was of shorter duration than the third culture step
used to produce the TSPNK cell tion. In another embodiment, the TSPNK cells produced
using the three-step process described herein possess longer telomeres than peripheral blood
(PB) derived NK cells.
In one embodiment, a TSPNK cell population produced by a three-step process
described herein comprises cells which are CD117+. In a specific embodiment, said TSPNK cell
populations comprise no more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%,
50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD117+ cells. In one embodiment, a
TSPNK cell population produced by a three—step process described herein comprises cells which
are . In a c ment, said TSPNK cell populations comprise no more than
about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%,
80%, 85%, or 90% NKGZD+ cells. In one embodiment, a TSPNK cell population produced by a
three—step process described herein comprises cells which are NKp44+. In a specific
embodiment, said TSPNK cell populations comprise no more than about 5%, 10%, 15%, 20%,
%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% NKp44+
cells. In one embodiment, a TSPNK cell population produced by a three-step process described
herein comprises cells which are CD52+. In a specific embodiment, said TSPNK cell
populations comprise no more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%,
50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD52+ cells. In a particular embodiment,
said TSPNK cell population produced by a three-step process described herein comprises cells
which are CD52+ CD117+. In one embodiment, a TSPNK cell population produced by a three-
step process described herein comprises cells which are CD244+. In a c embodiment, said
TSPNK cell populations se no more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%,
40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD244+ cells. In a particular
embodiment, said TSPNK cell tion produced by a step process described herein
comprises cells which are CD244+ CD117+. In one embodiment, a TSPNK cell population
produced by a three-step process described herein comprises cells which are LFA-1+. In a
specific embodiment, said TSPNK cell populations comprise no more than about 5%, 10%, 15%,
%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% LFA-
1+ cells. In one embodiment, a TSPNK cell population produced by a three-step process
described herein comprises cells which are CD94+. In a specific embodiment, said TSPNK cell
populations comprise no more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%,
50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD94+ cells.
2. NK Progenitor Cells
In one ment, said isolated NK progenitor cell population comprises a low
percentage of CD3—CD56+ cells as compared to the percentage of CD3—CD56+ cells associated
with non-progenitor NK cell populations, such as non-progenitor NK cell populations produced
by the three-step methods described , e.g., the NK progenitor cell population comprises
about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or 50% CD3—CD56+ cells. In another
specific embodiment, said NK progenitor cell population comprises no more than 5%, 10%,
%, 20%, 25%, 30%, 35%, 40%, 45%, or 50% CD3—CD56+ cells. In another specific
embodiment, said NK progenitor cell population comprises between 0%-5%, 5%-10%, 10%—
%, 15%-20%, 20%—25%, 25%-30%, %, 35%-40%, 40%-45%, or 45%-50% CD3—
CD56+ cells. In some embodiments, said NK progenitor cell tions, e.g., a NK progenitor
cell tions that comprise a low percentage of CD3—CD56+ cells as compared to the
tage of CD3—CD56+ cells associated with non-progenitor NK cell populations, comprise
no more than 1%, no more than 2%, no more than 3%, no more than 4%, no more than 5%, no
more than 10%, or no more than 15% CD3—CD56+ cells. In another specific embodiment, said
NK progenitor cell populations produced by a three-step s described herein are produced
using a three-step s that comprises a short third culture step, e.g., a third culture step of 4-
6, 5-7, 6-8, or 7-9 days.
In certain embodiments, said CD3‘CD56+ cells in said NK progenitor cell populations
are additionally CD117+. In a specific embodiment, about 65%, 70%, 75%, 80%, 85%, 90%,
95%, 98%, or 99% of said CD3‘CD56+ cells in said NK progenitor cell populations are CD117+.
In another specific embodiment, no less than 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, or
99% of said CD3‘CD56+ cells in said NK progenitor cell populations are CD117+. In another
specific ment, between 65%-70%, 70%-75%, 75%-80%, 80%-85%, 85%-90%, 90%-
95%, or 95%-99% of said 56+ cells in said NK progenitor cell populations are CD1 17+.
In certain embodiments, said CD3—CD56+ cells in said NK itor cell
populations are additionally . In a specific embodiment, about 40%, 45%, 50%, 55%,
60%, 65%, 70%, or 75% of said CD3—CD56+ cells in said NK progenitor cell populations are
CDl6l+. In another specific embodiment, no less than 40%, 45%, 50%, 55%, 60%, 65%, 70%,
or 75% of said CD3—CD56+ cells in said NK progenitor cell populations are CDl6l+. In
another specific embodiment, between 40%-45%, 45%-50%, 50%-55%, 55%-60%, 60%-65%,
%, or 70%-75% of said CD3—CD56+ cells in said NK progenitor cell populations are
CDl6l+.
In certain embodiments, said CD3—CD56+ cells in said NK progenitor cell
populations are additionally NKp46+. In a specific embodiment, about 25%, 30%, 35%, 40%,
45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or more of said CD3—CD56+ cells in
said NK progenitor cell populations are NKp46+. In a more specific ment, about 25%,
%, 35%, 40%, 45%, 50%, or 55% of said CD3—CD56+ cells in said NK progenitor cell
populations are NKp46+. In another specific embodiment, no more than 25%, 30%, 35%, 40%,
45%, 50%, or 55% of said CD3—CD56+ cells in said NK progenitor cell populations are
NKp46+. In another specific embodiment, between 25%-3 0%, %, 35%-40%, 40%-45%,
45%—50%, 50%—55%, 55%-60%, 60%-65%, 65%-70%, 70%—75%, 75%-80%, 80%-85%, 85%-
90% or more of said 56+ cells in said NK progenitor cell populations are NKp46+. In
a more specific embodiment, between 25%—30%, 30%-35%, 35%-40%, 40%-45%, %, or
50%-55% of said CD3—CD56+ cells in said NK progenitor cell populations are NKp46+.
In certain embodiments, said NK progenitor cell population contains cells that are
CD56+CD16_. In certain ments, CD3‘CD56+ cells in said NK progenitor cell populations
are CD167 In certain embodiments, CD3‘CD56+ cells in said NK progenitor cell tions
are CD16+. In a specific embodiment, said NK progenitor cell populations comprise no more
than 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or 50% CD16+ cells. In another specific
embodiment, said NK progenitor cell populations comprise between O%-5%, 5%-10%, 10%-
%, 15%-20%, or 20%-25% CD16Jr cells. In some embodiments, said NK progenitor cell
populations se no more than 1%, no more than 2%, no more than 3%, no more than 4%,
no more than 5%, no more than 10%, or no more than 15% CD16+ cells.
] In certain ments, said CD3—CD56+ cells in said NK progenitor cell
populations are additionally CD16-. In certain embodiments, said 56+ cells in said NK
progenitor cell populations are additionally CD117+ and CD161+. In certain embodiments, said
CD3—CD56+ cells in said NK progenitor cell populations are additionally CD16-, CD117+ and
CD161+. In certain embodiments, said CD3—CD56+ cells in said NK itor cell
populations are additionally CD16-, CD117+, CD161+, and NKp46+.
In one embodiment, an NK progenitor cell population produced by a three-step
process described herein comprises no more than about 40% CD3—CD56+ cells. In one
ment, an NK progenitor cell population produced by a three-step process described herein
comprises cells which are CD117+. In a specific embodiment, said NK progenitor cell
populations comprise no more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%,
50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD117+ cells. In one embodiment, an
NK progenitor cell population produced by a three-step process described herein ses cells
which are CD52+. In a specific ment, said NK itor cell populations comprise no
more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%,
75%, 80%, 85%, or 90% CD52+ cells. In a particular embodiment, said NK progenitor cell
population produced by a three—step process described herein ses cells which are CD52+
CD117+. In one ment, an NK progenitor cell population ed by a three-step
process described herein ses cells which are CD244+. In a c embodiment, said NK
progenitor cell populations comprise no more than about 5%, 10%, 15%, 20%, 25%, 30%, 35%,
40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD244+ cells. In a particular
embodiment, said NK itor cell population produced by a three—step process described
herein comprises cells which are CD244+ CD117+. In one embodiment, an NK progenitor cell
population produced by a three—step process described herein comprises cells which are .
In a specific embodiment, said NK progenitor cell populations comprise no more than about 5%,
%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or
90% LFA-1+ cells. In one embodiment, an NK progenitor cell population produced by a three-
step process described herein ses cells which are CD94+. In a specific embodiment, said
NK progenitor cell populations comprise no more than about 5%, 10%, 15%, 20%, 25%, 30%,
%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD94+ cells.
In particular embodiments, an NK progenitor cell population produced by a three—step
process described herein comprises a greater proportion of CD56- cells than CD56+ cells. In
particular embodiments, an NK progenitor cell population produced by a three-step process
described herein entiates in Vivo or eX Vivo into a population with an increased proportion
of CD56+ cells.
In a specific embodiment, an NK progenitor cell population ed by a step
process described herein comprises a low percentage of CD34‘CD117+ cells as ed to the
percentage of CD34‘CD1 17+ cells associated with a non-progenitor NK cell population, e.g., the
NK progenitor cell population comprises about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%,
45%, or 50% CD34‘CD117+ cells. In another specific embodiment, said NK progenitor cell
population comprises no more than 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or 50%
CD34'CD117+ cells. In another specific embodiment, said NK progenitor cell population
comprises between 0%-5%, 5%-10%, 10%-15%, %, 20%-25%, 25%-30%, 30%-3 5%,
%-40%, 40%-45%, or 45%-50% CD34‘CD117+ cells. In some embodiments, said NK
progenitor cell population comprises no more than 1%, no more than 2%, no more than 3%, no
more than 4%, no more than 5%, no more than 10%, or no more than 15% CD34‘CD117+ cells.
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In another specific embodiment, said NK progenitor cell population produced by a three-step
process described herein is produced using a three-step process that comprises a short third
culture step, e.g., a third culture step of 4-6, 5-7, 6-8, or 7-9 days.
In a specific embodiment, an NK progenitor cell population produced by a three-step
process described herein comprises a low percentage of CD161+ cells as compared to the
percentage of CD161+ cells associated with a non-progenitor NK cell population, e.g, the NK
progenitor cell population comprises about 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or
50% CD161+ cells. In r specific embodiment, said NK progenitor cell population
comprises no more than 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or 50% CD161+
cells. In another c embodiment, said NK progenitor cell population comprises between
0%—5%, 5%—10%, 10%-15%, 15%—20%, 20%—25%, 25%—30%, 5%, 35%,—40%, 40%,—45%,
or 45%-50% CD1614r cells. In some ments, said NK progenitor cell tion
comprises no more than 1%, no more than 2%, no more than 3%, no more than 4%, no more
than 5%, no more than 10%, or no more than 15% CD161+ cells. In another specific
embodiment, said NK itor cell population produced by a three-step process bed
herein is produced using a three-step process that ses a short third culture step, e.g., a third
culture step of 4-6, 5-7, 6-8, or 7-9 days.
In a specific embodiment, an NK progenitor cell population produced by a three-step
process described herein comprises a low percentage of NKp46+ cells as compared to the
tage ofNKp46+ cells associated with a non-progenitor NK cell population, e.g., the NK
progenitor cell population comprises about 1%, 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%,
45%, or 50% NKp46+ cells. In another specific embodiment, said NK progenitor cell population
comprises no more than 1%, 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or 50% NKp46+
cells. In another specific embodiment, said NK progenitor cell population comprises between
O%-5%, 5%-10%, 10%-15%, 15%-20%, 20%-25%, 25%-30%, 30%-35%, 35%-40%, 40%-45%,
or 45%-50% NKp46Jr cells. In some embodiments, said NK progenitor cell population
comprises no more than 1%, no more than 2%, no more than 3%, no more than 4%, no more
than 5%, no more than 10%, or no more than 15% NKp46+ cells. In another specific
embodiment, said NK progenitor cell population produced by a three-step process bed
herein is produced using a step s that comprises a short third culture step, e.g., a third
culture step of 4-6, 5-7, 6-8, or 7-9 days.
In a specific embodiment, an NK progenitor cell population produced by a three-step
process described herein comprises a low percentage of CD56+CD16— cells as compared to the
percentage of D16- cells associated with a non-progenitor NK cell population, e.g., the
NK progenitor cell population ses about 1%, 5%, 10%, 15%, 20%, 25%, 30%, 35%,
40%, 45%, or 50% CD56+CD16- cells. In another c embodiment, said NK progenitor cell
population comprises no more than 1%, 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, or
50% D16- cells. In another c embodiment, said NK progenitor cell population
ses between 0%-5%, 5%-10%, 10%-15%, 15%-20%, 20%-25%, 25%-30%, 30%-3 5%,
%-40%, 40%—45%, or 45%—50% CD56+CD16- cells. In some embodiments, said NK
progenitor cell tion comprises no more than 1%, no more than 2%, no more than 3%, no
more than 4%, no more than 5%, no more than 10%, or no more than 15% CD56+CD16- cells.
In another specific embodiment, said NK itor cell population produced by a three-step
process described herein is produced using a step process that comprises a short third
culture step, e.g., a third e step of 4-6, 5—7, 6-8, or 7-9 days.
In one embodiment, an NK progenitor cell population produced by a three-step
process bed herein comprises cells that are CD52+CD117+. In a specific embodiment, an
NK progenitor cell population produced by a three-step s described herein comprises a
higher percentage of CD52+CD117+ cells as compared to the percentage of CD52+CD1 17+ cells
associated with a hematopoietic progenitor cell population. In a specific ment, an NK
progenitor cell population produced by a three-step process described herein comprises a higher
percentage of CD52+CD1 17+ cells as compared to the percentage of CD52+CD117+ cells
associated with a non-progenitor NK cell population, e.g., the NK progenitor cell population
comprises about 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or more CD52+CD117+
cells. In another specific embodiment, said NK progenitor cell population comprises no less than
50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, or 90% CD52+CD117+ cells. In another Specific
embodiment, said NK progenitor cell tion comprises n 50%-55%, 55%-60%, 60%-
65%, %, 70%—75%, 75%-80%, 80%-85%, 85%-90%, 90%—95% or more CD52+CD117+
cells. In another specific embodiment, said NK progenitor cell population which comprises
CD52+CD117+ cells produced by a three-step process described herein is produced using a
three-step process that comprises a short third culture step, e.g., a third culture step of 4-6, 5—7, 6-
8, or 7-9 days. In a specific embodiment, said NK progenitor cell population which comprises
CD52+CD117+ cells is produced using a three-step process that comprises a total of 12 days or
more, 13 days or more, 14 days or more, 15 days or more, 16 days or more, 17 days or more, 18
days or more, 19 days or more, 20 days or more, or 21 days or more of culture. In a specific
embodiment, said NK progenitor cell population which comprises CD52+CD117+ cells is
produced using a three-step process that comprises a total of at least 12 days, 13 days, or 14 days
of culture but not more than 21-25 days, 25—30 days, or 30—35 days of culture. In a c
embodiment, said NK progenitor cell population which comprises CD52+CD117+ cells is
produced using a three-step process that comprises a total of 21 days of culture.
In a specific embodiment, the NK progenitor cells described herein possess a greater
ability to engraft bone marrow (e.g., in vivo) than non-progenitor NK cells, e.g., non-progenitor
NK cells produced using a comparable method. For example, in certain embodiments, NK
progenitor cells produced using a three-step process that comprises a short third culture step, e.g.,
a third culture step of 4-6, 5-7, 6-8, or 7-9 days t bone marrow (e.g., in vivo) at a higher
efficiency than non-progenitor NK cells produced using a step process that comprises a
longer third culture step, e.g., a third culture step of 18-20, 19-21, 20-22, or 21-23 days. In
another embodiment, the NK progenitor cells bed herein s longer res than
peripheral blood (PB) derived NK cells.
.1.4. NK Cells Produced by Three-Stage Method
In one embodiment, provided herein is an isolated NK cell population, wherein said
NK cells are produced according to the three-stage method described below.
In one embodiment, provided herein is an isolated NK cell population produced by a
three-stage method described herein, n said NK cell population comprises a greater
percentage of CD3—CD56+ cells than an NK progenitor cell population ed by a three-
stage method described herein, e.g., an NK progenitor cell population produced by the same
three-stage method with the exception that the third culture step used to produce the NK
progenitor cell population was of shorter on than the third e step used to e the
NK cell population. In a specific embodiment, said NK cell tion comprises about 70% or
more, in some embodiments, 75%, 80%, 85%, 90%, 95%, 98%, or 99% CD3—CD56+ cells. In
another specific embodiment, said NK cell population comprises no less than 80%, 85%, 90%,
95%, 98%, or 99% CD3—CD56+ cells. In another specific embodiment, said NK cell population
comprises between 70%-75%, 75%-80%, 80%-85%, 85%-90%, 90%-95%, or 95%-99% CD3—
CD56+ cells.
In certain embodiments, said CD3—CD56+ cells in said NK cell population comprises
CD3—CD56+ cells that are additionally NKp46+. In certain embodiments, said 56+
cells in said NK cell population comprises CD3—CD56+ cells that are additionally CD16-. In
certain embodiments, said CD3—CD56+ cells in said NK cell population comprises CD3—CD56+
cells that are additionally CD16+. In certain embodiments, said CD3—CD56+ cells in said NK
cell population comprises CD3—CD56+ cells that are additionally CD94-. In certain
embodiments, said CD3—CD56+ cells in said NK cell population comprises CD3—CD56+ cells
that are additionally CD94+.
In one embodiment, an NK cell population produced by a three-stage method
described herein comprises cells which are CD117+. In one embodiment, an NK cell population
produced by a three-stage method described herein comprises cells which are NKG2D+. In one
ment, an NK cell population produced by a three-stage method described herein
comprises cells which are NKp44+. In one embodiment, an NK cell population produced by a
three-stage method described herein comprises cells which are CD244+.
.1.5. Cell Combinations and Cell/Perfusate Combinations
The NK cells, e.g., activated NK cells and/or TSPNK cells can further be ed
with placental perfusate, placental perfusate cells and/or adherent tal cells in the t
invention.
.1.5.1. ations ofNK Cells and Perfusate or Perfusate Cells
In specific embodiments, the natural killer cells comprise CD56+CD16_ PiNK cells in
combination with CD56+CD16+ natural killer cells. In more specific embodiments, the
CD56+CD16Jr natural killer cells can be isolated from placenta, or from another source, e.g.,
peripheral blood, umbilical cord blood, bone marrow, or the like. Thus, in various other
ments, PiNK cells can be combined with CD56+CD16+ natural killer cells, e.g, in ratios
of, for example, about 1:10, 2:9, 3:8, 4:7:, 5:6, 6:5, 7:4, 8:3, 9:2,1:10,1:9,1:8,1:7,l:6,1:5,1:4,
1:3, 1:2, 1:1, 2:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1 or about 9:1. As used in this t, “isolated”
means that the cells have been removed from their normal nment, e.g, the ta.
In various specific embodiments, the isolated population ofNK cells comprises at
least about 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98% or at least about 99%
PiNK cells. In r embodiment, the plurality ofPiNK cells comprises, or consists of, PiNK
cells that have not been expanded; e.g, are as collected from placental ate. In another
embodiment, the plurality of PiNK cells comprises, or consists of, PiNK cells that have been
ed. Methods of expanding natural killer cells are described elsewhere herein, and have
been described, e.g., in Ohno el al., US. Patent Application Publication No. 2003/0157713; see
also Yssel et 01]., J. Immunol. Methods 72(1):2l9-227 (1984) and Litwin et 0]., J. Exp. Med.
178(4):1321-1326 (1993).
] In specific embodiments, the isolated population ofNK cells is a tion of
placental cells comprising PiNK cells. In a specific embodiment, the isolated population ofNK
cells is total nucleated cells from placental perfusate, e.g., placental ate cells, comprising
autologous, isolated PiNK cells. In various other embodiments, activated NK cells can be
combined with, e.g., NK cells, wherein said NK cells have been isolated from a tissue source and
have not been expanded, NK cells isolated from a tissue source and expanded, or NK cells
produced by a different method, e.g, CD56+CD16+ l killer cells, e.g, in ratios of, for
example, about 1:10, 2:9, 3:8, 4:7:, 5:6, 6:5, 7:4, 8:3, 9:2,1:10,1:9,1:8,1:7,1:6,1:5,1:4,1:3,
1:2, 1:1, 2:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1 or about 9:1. As used in this t, “isolated” means
that the cells have been removed from their normal tissue environment.
In specific ments, activated NK cells can also be combined with, e.g., NK
cells, wherein said NK cells have been isolated from a tissue source and have not been expanded,
NK cells isolated from a tissue source and expanded, or NK cells produced by a different
method, e.g., CD56+CD16+ natural killer cells, e.g., in ratios of, for example, about 1:10, 2:9,
3:8, 4:7:, 5:6, 6:5, 7:4, 8:3, 9:2,1:10,1:9,1:8,1:7,1:6,1:5,1:4,1:3,1:2,1:1, 2:1, 3:1, 4:1, 5:1,
6: 1, 7: 1, 8:1 or about 9: 1. As used in this context, “isolated” means that the cells have been
removed from their normal tissue nment.
] In one embodiment, for example, a volume of placental ate supplemented with
NK cells produced using the processes described herein, e.g., activated NK cells or TSPNK cells
(e.g., NK progenitor cells), is used. In specific embodiments, for example, each milliliter of
placental perfusate is supplemented with about 1 x 104, 5 x 104, 1 x 105, 5 x 105, 1 x 106, 5 x 106,
1 x 107, 5 x 107, l x 108, 5 x 108 or more NK cells produced using the processes described
herein, e. g., activated NK cells or TSPNK cells (e.g., NK progenitor cells). In another
embodiment, placental perfusate cells are supplemented with NK cells produced using the
2015/068069
processes described herein, e.g., activated NK cells or TSPNK cells (e.g., NK progenitor cells).
In certain other embodiments, when placental ate cells are combined with NK cells
produced using the processes described herein, e.g., activated NK cells or TSPNK cells (e.g., NK
progenitor cells), the placental perfusate cells lly se about, r than about, or
fewer than about, 50%, 45%, 40%, 35%, 30%, 25%, 20%, 15%, 10%, 8%, 6%, 4%, 2% or 1% of
the total number of cells. In certain other embodiments, when NK cells produced using the
processes described herein, e.g., activated NK cells or TSPNK cells (e.g., NK progenitor cells),
are combined with a plurality of placental ate cells and/or combined natural killer cells, the
NK cells generally comprise about, greater than about, or fewer than about, 50%, 45%, 40%,
%, 30%, 25%, 20%, 15%, 10%, 8%, 6%, 4%, 2% or 1% of the total number of cells. In
certain other embodiments, when NK cells produced using the processes described herein, e.g.,
activated NK cells or TSPNK cells (e.g., NK progenitor cells), are used to ment tal
perfusate, the volume of solution (e.g., saline solution, culture medium or the like) in which the
cells are suspended comprises about, greater than about, or less than about, 50%, 45%, 40%,
%, 30%, 25%, 20%, 15%, 10%, 8%, 6%, 4%, 2% or 1% of the total volume of perfusate plus
cells, where the NK cells are suspended to about 1 X 104, 5 X 104, 1 X 105, 5 X 105, 1 X 106, 5 X
106, 1 X 107, 5 X 107, 1 X 108, 5 X 108 or more cells per milliliter prior to supplementation.
In other embodiments, any of the above combinations of cells is, in turn, combined
with umbilical cord blood or nucleated cells from umbilical cord blood.
Pooled tal perfusate that is obtained from two or more sources, e.g, two or
more placentas, and combined, e.g., pooled, can further be used in the present ion. Such
pooled perfusate can comprise imately equal volumes of perfusate from each source, or
can comprise different volumes from each source. The relative volumes from each source can be
randomly selected, or can be based upon, e.g., a concentration or amount of one or more ar
factors, e.g, cytokines, growth factors, hormones, or the like; the number of placental cells in
perfusate from each source, or other characteristics of the perfusate from each . Perfusate
from multiple perfusions of the same placenta can similarly be pooled.
Similarly, placental perfusate cells, and placenta-derived intermediate natural killer
cells, that are obtained from two or more sources, e.g., two or more placentas, and pooled, can
also be used in the present invention. Such pooled cells can comprise approximately equal
numbers of cells from the two or more sources, or different numbers of cells from one or more of
the pooled sources. The relative numbers of cells from each source can be selected based on,
e.g., the number of one or more specific cell types in the cells to be pooled, e.g‘, the number of
CD34+ cells, etc.
NK cells produced using the processes described herein, e.g., activated NK cells or
TSPNK cells (e.g., NK progenitor cells), and combinations of such cells with placental perfusate
and/or placental perfusate cells can be assayed to determine the degree or amount of
tumor/infection suppression (that is, the potency) to be expected from, e.g, a given number of
the NK cells, or a given volume of perfusate. For example, an aliquot or sample number of cells
is contacted or brought into proximity with a known number of tumor/infected cells under
conditions in which the infected cells would otherwise proliferate, and the rate of
proliferation of the tumor/infected cells in the presence of placental ate, perfusate cells,
placental natural killer cells, or combinations thereof, over time (e.g, 1, 2, 3, 4, 5, 6, 7, 8, 9, or
weeks, or longer) is compared to the proliferation of an equivalent number of the
tumor/infected cells in the absence of perfusate, perfusate cells, placental natural killer cells, or
combinations thereof. The y of the cells can be expressed, e.g, as the number of cells or
volume of solution required to suppress tumor cell growth/infection spread, e.g., by about 10%,
%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, or the like.
] In n embodiments, NK cells produced using the processes described herein, e.g.,
activated NK cells or TSPNK cells (e.g., NK progenitor cells), are provided as pharmaceutical
grade administrable units. Such units can be provided in discrete volumes, e.g., 15 mL, 20 mL,
mL, 30 nL. 35 mL, 40 mL, 45 mL, 50 mL, 55 mL, 60 mL, 65 mL, 70 mL, 75 mL, 80 mL, 85
mL, 90 mL, 95 mL, 100 mL, 150 mL, 200 mL, 250 mL, 300 mL, 350 mL, 400 mL, 450 mL, 500
mL, or the like. Such units can be provided so as to n a specified number of cells, e.g., NK
cells or NK cell populations, or NK progenitor cell populations in combination with other NK
cells or perfusate cells, e.g., 1 x 104, 5 x104, 1x105,5 x105,1x106,5 x106,1x107,5 x 107,1
x 108, 5 x 108 or more cells per milliliter, or 1 x 104, 5 x104,lx105,5 x105, 1x106,5 x106, lx
107, 5 x107,1x108,5 x108, 5 x109, 1x1010,5 lx10110r more cells per unit.
In specific embodiments, the units can comprise about, at least about, or at most about 1 x 104, 5
x104, 1x105,5 x105, 1x106,5 x106 or more NK cells per milliliter, or 1 x 104, 5 x104, 1x
105, 5 x105, 5 x106, 1x107,5 x107, 1x108,5 x108, 5 x109, 1x1010,5 x1010,
1 x 1011 or more cells per unit. Such units can be provided to contain specified numbers ofNK
cells, and/or any of the other cells.
In the above embodiments, the NK cells or combinations ofNK cells with perfusate
cells or perfusate can be autologous to a recipient (that is, obtained from the recipient), or
allogeneic to a recipient (that is, obtained from at last one other individual from said recipient).
In certain embodiments, each unit of cells is labeled to y one or more of
volume, number of cells, type of cells, whether the unit has been enriched for a particular type of
cell, and/or potency of a given number of cells in the unit, or a given number of milliliters of the
unit, that is, whether the cells in the unit cause a measurable suppression of proliferation of a
particular type or types of tumor cell.
.1.5.2. Combination of NK Cells from Matched Perfusate and Cord Blood
Natural Killer Cells can be further obtained from combinations of matched units of
placental perfusate and umbilical cord blood in the present ion, and are referred to herein
as combined natural killer cells. “Matched units,” as used , indicates that the NK cells are
obtained from tal perfusate cells, and umbilical cord blood cells, wherein the cal
cord blood cells are obtained from umbilical cord blood from the placenta from which the
placental perfusate is obtained, i.e., the placental perfusate cells and umbilical cord blood cells,
and thus the natural killer cells from each, are from the same dual.
In certain embodiments, the combined placental killer cells comprise only, or
substantially only, natural killer cells that are CD56“ and CD16‘. In certain other embodiments,
the combined placental killer cells comprise NK cells that are CD56+ and CD16‘, and NK cells
that are CD56+ and CD16+. In certain specific embodiments, the combined placental killer cells
comprise at least 50%, 60%, 70%, 80%, 90%, 95%, 96%, 97%, 98%, 99% or 99.5%
D16' natural killer cells (PiNK cells).
In one embodiment, the combined natural killer cells have not been cultured. In a
specific embodiment, the combined natural killer cells se a detectably higher number of
56+CD16_ natural killer cells than an equivalent number of natural killer cells from
peripheral blood. In another ic embodiment, the combined natural killer cells comprise a
detectably lower number of 56+CD16_ natural killer cells than an equivalent number of
l killer cells from peripheral blood. In another specific embodiment, the combined l
killer cells comprise a detectably higher number of CD3’CD56+KIR2DL2/L3+ natural killer cells
than an equivalent number of natural killer cells from peripheral blood. In another specific
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embodiment, the combined natural killer cells comprise a detectably lower number of CD3—
CD56+ NKp46+ natural killer cells than an equivalent number of natural killer cells from
peripheral blood. In another specific ment, the combined natural killer cells se a
detectably lower number of CD3‘CD56+ NKp3 0+ natural killer cells than an equivalent number
of natural killer cells from peripheral blood. In another specific embodiment, the combined
natural killer cells comprise a detectably lower number of CD3‘CD56+2B4+ natural killer cells
than an equivalent number of natural killer cells from peripheral blood. In another specific
ment, the combined natural killer cells comprise a detectably lower number of CD3—
CD56+CD94+ natural killer cells than an equivalent number of natural killer cells from peripheral
blood.
In another embodiment, the ed natural killer cells have been cultured, e.g, for
21 days. In a specific embodiment, the combined natural killer cells comprise a detectably lower
number of CD3'CD56+KIR2DL2/L3+ natural killer cells than an lent number of natural
killer cells from peripheral blood. In another specific embodiment, the combined natural killer
cells have not been cultured. In another specific embodiment, the combined natural killer cells
se a detectably higher number of CD3‘CD56WKp44+ natural killer cells than an
equivalent number of natural killer cells from peripheral blood. In a specific ment, the
combined natural killer cells se a detectably higher number of CD3‘CD56lNKp30+
natural killer cells than an equivalent number of natural killer cells from peripheral blood.
In another embodiment, the combined natural killer cells express a detectably higher
amount of granzyme B than an equivalent number of peripheral blood natural killer cells.
Combined natural killer cells can further be combined with umbilical cord blood. In
various embodiments, cord blood is combined with combined natural killer cells at about 1 x 104,
x104,1x105,5 x105,1x106,5 x106,1x107,5 X108,5 x108 combined l
killer cells per milliliter of cord blood.
.1.5.3. Combinations ofNK Cells with Adherent Placental Stem Cells
In other embodiments, the NK cells produced using the processes described herein,
e. g., activated NK cells or TSPNK cells (e.g, NK progenitor cells) produced using the three-step
process described herein, either alone or in combination with placental perfusate or placental
perfusate cells, are supplemented with isolated adherent placental cells, e.g, placental stem cells
and tal otent cells as described, e.g., in Hariri US. Patent Nos. 7,045,148 and
7,255,879, and in US. Patent ation Publication No. 2007/0275362, the disclosures of
which are incorporated herein by reference in their ties. “Adherent placental cells” means
that the cells are nt to a tissue culture surface, e.g., tissue culture plastic. The adherent
placental cells useful in the compositions and methods disclosed herein are not trophoblasts,
embryonic germ cells or embryonic stem cells. In certain embodiments, adherent placental stem
cells are used as feeder cells during the processes (e.g, two—step method) as described above.
The NK cells produced using the processes described herein, e.g, activated NK cells
or TSPNK cells (e.g., NK progenitor cells), either alone or in combination with placental
perfusate or placental perfusate cells can be supplemented with, e.g., 1 X 104, 5 X 104, 1 X 105, 5 X
105, 1 x 106, 5 x 10", 1 x 107, 5 x 107, 1 x 108, 5 x 108 or more adherent placental cells per
iter, or 1 x 104, 5 x104, 1x105,5 x105,1x106,5 x106,1x107,5 x107,1x108,5 x108,1
X 109, 5 X 109, 1 X 1010, 5 X 1010, 1 X 1011 or more adherent placental cells. The adherent
placental cells in the combinations can be, e.g., adherent placental cells that have been cultured
for, e.g., 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 12, 14, 16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, or 40
population doublings, or more.
ed nt tal cells, when cultured in primary cultures or expanded in
cell culture, adhere to the tissue culture substrate, e.g., tissue culture container surface (e.g.,
tissue culture plastic). Adherent placental cells in culture assume a generally fibroblastoid,
stellate appearance, with a number of cytoplasmic processes ing from the central cell
body. Adherent placental cells are, however, morphologically distinguishable from fibroblasts
cultured under the same conditions, as the nt placental cells eXhibit a greater number of
such processes than do fibroblasts. logically, adherent placental cells are also
distinguishable from hematopoietic stem cells, which generally assume a more rounded, or
stone, morphology in e.
The isolated adherent placental cells, and populations of adherent placental cells,
useful in the compositions and methods provided herein, eXpress a plurality of markers that can
be used to identify and/or isolate the cells, or populations of cells that comprise the adherent
placental cells. The nt placental cells, and adherent placental cell tions useful in the
compositions and methods ed herein include adherent placental cells and adherent
placental cell—containing cell populations obtained directly from the placenta, or any part thereof
(e. g., amnion, chorion, amnion-chorion plate, placental cotyledons, umbilical cord, and the like).
The adherent placental stem cell population, in one embodiment, is a population (that is, two or
more) of adherent placental stem cells in e, e.g., a population in a container, e.g., a bag.
The adherent placental cells generally express the markers CD73, CD105, and
CD200, and/or OCT-4, and do not s CD34, CD38, or CD45. Adherent placental stem
cells can also express HLA-ABC (MHC-l) and HLA-DR. These markers can be used to identify
adherent placental cells, and to distinguish the adherent placental cells from other cell types.
Because the adherent placental cells can express CD73 and CD105, they can have mesenchymal
stem cell-like characteristics. Lack of expression of CD34, CD38 and/or CD45 identifies the
adherent placental stem cells as matopoietic stem cells.
] In certain ments, the isolated nt placental cells described herein
detectably suppress cancer cell proliferation or tumor growth.
In n embodiments, the isolated adherent placental cells are isolated placental
stem cells. In certain other embodiments, the isolated adherent placental cells are isolated
placental multipotent cells. In a specific embodiment, the isolated adherent placental cells are
CD34‘, CD10+ and CD105+ as detected by flow cytometry. In a more specific embodiment, the
isolated CD34‘, CD10+, CD105+ adherent placental cells are placental stem cells. In another
more specific embodiment, the isolated CD34‘, CD10+, CD105+ placental cells are multipotent
adherent placental cells. In another specific embodiment, the isolated CD34‘, CD10+, CD105+
tal cells have the potential to differentiate into cells of a neural phenotype, cells of an
osteogenic phenotype, or cells of a chondrogenic phenotype. In a more specific embodiment, the
isolated CD34‘, CD10+, CD105+ nt placental cells are onally CD200] In another
more specific embodiment, the isolated CD34‘, CD10+, CD105+ adherent placental cells are
additionally CD90+ or CD45‘, as ed by flow cytometry. In another more specific
embodiment, the isolated CD34‘, CD10+, CD105+ adherent placental cells are additionally
CD90" or CD45‘, as detected by flow cytometry. In a more specific embodiment, the CD34‘,
CD10", CD105+, CD200+ adherent placental cells are additionally CD90+ or CD45‘, as detected
by flow cytometry. In r more specific embodiment, the CD34", CD10+, CDIOSI, CD200+
adherent placental cells are additionally CD90+ and CD45‘, as detected by flow cytometry. In
another more specific embodiment, the CD34‘, CD101 CD105: CD200: CD901 CD45—
adherent tal cells are additionally CD80‘ and CD86‘, as detected by flow cytometry.
In one embodiment, the isolated adherent placental cells are CD200+, HLA-G] In a
specific embodiment, said isolated adherent placental cells are also CD73+ and CD105+. In
another specific embodiment, said isolated adherent placental cells are also CD34‘, CD3 8— or
CD45‘. In a more specific embodiment, said ed adherent placental cells are also CD34‘,
CD3 8‘, CD45‘, CD73+ and CD105+. In another embodiment, said isolated adherent tal
cells produce one or more embryoid-like bodies when ed under conditions that allow the
formation of embryoid-like bodies.
In another embodiment, the isolated adherent placental cells are CD73+, ,
CD200+. In a specific embodiment, said isolated adherent placental cells are also . In
another specific embodiment, said isolated adherent placental cells are also CD34‘, CD3 8— or
CD45‘. In another specific embodiment, said isolated adherent placental cells are also CD34‘,
CD3 8— and CD45‘. In a more specific embodiment, said isolated adherent placental cells are
also CD34‘, CD3 8—, CD45‘, and HLA-G+. In another specific embodiment, said isolated
adherent placental cells produce one or more embryoid-like bodies when cultured under
conditions that allow the formation of embryoid-like bodies.
In another embodiment, the isolated adherent placental cells are CD200+, OCT-4+. In
a specific ment, said ed adherent placental cells are also CD73+ and CD105+. In
another specific embodiment, said isolated nt placental cells are also HLA-G+. In another
specific embodiment, said isolated adherent placental cells are also CD34‘, CD3 8— and CD45‘.
In a more specific embodiment, said ed adherent placental cells are also CD34‘, CD3 8—,
CD45", CD73+, CD105+ and PEA-G“. In r specific ment, the isolated adherent
placental cells also produce one or more embryoid-like bodies when cultured under conditions
that allow the formation of embryoid-like bodies.
In another embodiment, the isolated adherent placental cells are CD73+, CD105Jr and
HLA-G+. In a specific embodiment, said isolated adherent tal cells are also CD34‘,
CD3 8— or CD45‘. In r specific embodiment, said isolated adherent placental cells also
CD34‘, CD38‘ and CD45‘. In another specific embodiment, said adherent stem cells are also
. In another specific embodiment, said adherent stem cells are also CD200+. In a more
specific embodiment, said adherent stem cells are also CD34‘, CD38‘, CD45‘, OCT-4+ and
CD200]
In another embodiment, the isolated adherent placental cells are CD73+, CD105Jr stem
cells, wherein said cells produce one or more embryoid-like bodies under conditions that allow
ion of embryoid-like bodies. In a specific embodiment, said isolated adherent placental
cells are also CD34‘, CD3 8‘ or CD45‘. In another specific embodiment, isolated adherent
placental cells are also CD34: CD3 8‘ and CD45‘. In r c embodiment, isolated
adherent placental cells are also OCT-4+. In a more specific embodiment, said isolated nt
placental cells are also OCT-4+, CD34: CD38‘ and CD45‘.
In another embodiment, the adherent tal stem cells are OCT-4+ stem cells,
wherein said adherent tal stem cells produce one or more embryoid-like bodies when
cultured under conditions that allow the formation of embryoid-like bodies, and wherein said
stem cells have been fied as detectably suppressing cancer cell proliferation or tumor
growth.
In various embodiments, at least 10%, at least 20%, at least 30%, at least 40%, at
least 50% at least 60%, at least 70%, at least 80%, at least 90%, or at least 95% of said isolated
adherent placental cells are . In a specific embodiment, said ed adherent placental
cells are also CD73+ and CD105+. In r specific embodiment, said isolated adherent
placental cells are also CD34‘, CD3 8‘, or CD45‘. In another specific embodiment, said stem
cells are CD200+. In a more specific embodiment, said ed adherent placental cells are also
CD73+, , CD200+, CD34‘, CD3 8‘, and CD45‘. In another specific embodiment, said
isolated adherent placental cells have been expanded, for example, passaged at least once, at
least three times, at least five times, at least 10 times, at least 15 times, or at least 20 times.
In a more specific embodiment of any of the above embodiments, the isolated
adherent placental cells express ABC—p (a placenta-specific ABC transporter protein, see, e.g.,
Allikmets et al., Cancer Res. 58(23):5337-9 (1998)).
] In another embodiment, the isolated adherent placental cells CD29+, CD44: CD73+,
CD90+, CD105+, CD200+, CD34‘ and CD133‘. In another embodiment, the isolated adherent
placental cells constitutively secrete IL-6, IL-8 and monocyte chemoattractant protein (MCP-l).
Each of the referenced isolated adherent placental cells can comprise cells
obtained and isolated directly from a mammalian placenta, or cells that have been cultured and
passaged at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 12, l4, l6, 18, 20, 25, 30 or more times, or a
combination thereof. Tumor cell suppressive pluralities of the isolated adherent placental cells
described above can comprise about, at least, or no more than, 1 x 105, 5 x 105, l x 106, 5 x 106, l
x 107, 5 x107, 1x108,5 x108, 5 x109, 1x1010,5 x1010, 1x1011or more isolated
adherent placental cells.
.1.5.4. Compositions Comprising Adherent Placental Cell Conditioned Media
Also can be used in the present invention is a composition comprising NK cells
ed using the processes described herein, e.g., activated NK cells or TSPNK cells (e.g, NK
progenitor cells) produced using the three-step process described , and additionally
ioned medium, wherein said composition is tumor suppressive, or is effective in the
treatment of cancer or viral infection. Adherent placental cells as described herein can be used to
e conditioned medium that is tumor cell suppressive, anti-cancer or iral that is,
medium comprising one or more biomolecules secreted or excreted by the cells that have a
detectable tumor cell suppressive effect, anti—cancer effect or antiviral effect. In various
embodiments, the conditioned medium comprises medium in which the cells have proliferated
(that is, have been cultured) for at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or more days. In
other embodiments, the conditioned medium comprises medium in which such cells have grown
to at least 30%, 40%, 50%, 60%, 70%, 80%, 90% confluence, or up to 100% confluence. Such
conditioned medium can be used to support the culture of a separate population of cells, e.g.,
placental cells, or cells of another kind. In another embodiment, the conditioned medium
provided herein comprises medium in which isolated adherent placental cells, e.g., isolated
adherent tal stem cells or isolated adherent placental multipotent cells, and cells other than
isolated adherent placental cells, e.g., non-placental stem cells or otent cells, have been
cultured.
] Such conditioned medium can be combined with any of, or any combination ofNK
cells produced using the processes described herein, e.g., activated NK cells or TSPNK cells
(e.g., NK progenitor cells), placental perfusate, placental perfusate cells to form a ition
that is tumor cell suppressive, anticancer or antiviral. In certain embodiments, the composition
ses less than half conditioned medium by volume, e.g, about, or less than about, 50%,
45%, 40%, 35%, 30%, 25%, 20%, 15%, 10%, 5%, 4%, 3%, 2%, or 1% by volume.
Thus, in one ment, used in the present invention is a ition comprising
NK cells produced using the processes described herein, e.g., activated NK cells or TSPNK cells
(e.g., NK progenitor cells), and culture medium from a culture of isolated adherent placental
cells, wherein said isolated adherent tal cells (a) adhere to a substrate; and (b) are CD34",
CD10+ and CD105+, n said composition detectably suppresses the growth or proliferation
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of tumor cells, or is anti-cancer or antiviral. In a specific embodiment, the isolated adherent
placental cells are CD342 CD10+ and CD105+ as detected by flow cytometry. In a more specific
ment, the isolated CD34‘, CDlO+, CD105+ adherent placental cells are placental stem
cells. In another more specific embodiment, the isolated CD34‘, CDlO+, CD105+ placental cells
are multipotent nt placental cells. In another specific embodiment, the isolated CD34:
CD10+, CD105+ placental cells have the potential to differentiate into cells of a neural
ype, cells of an osteogenic phenotype, or cells of a chondrogenic phenotype. In a more
specific embodiment, the isolated CD34‘, CDlO+, CD105+ adherent placental cells are
additionally CD200+. In another more specific embodiment, the isolated CD34: CDlO+,
CD105+ adherent placental cells are additionally CD90+ or CD45: as detected by flow
cytometry. In another more c embodiment, the isolated CD34‘, CD10+, CD105+ adherent
placental cells are onally CD90+ or CD45‘, as detected by flow cytometry. In a more
specific ment, the CD34‘, CDlO+, CD105+, CD200+ adherent placental cells are
additionally CD90+ or CD45: as detected by flow cytometry. In another more specific
embodiment, the CD34‘, CD10+, CD105+, CD200+ adherent placental cells are additionally
CD90+ and CD45: as ed by flow cytometry. In another more specific embodiment, the
CD34‘, CD10+, CD105+, CD200+, CD901 CD45‘ adherent placental cells are additionally
CD80‘ and CD86: as detected by flow cytometry.
In another embodiment, used in the present invention is a composition comprising
NK cells produced using the processes bed , e.g., ted NK cells or TSPNK cells
(e.g., NK progenitor cells), and culture medium from a culture of isolated adherent placental
cells, wherein said isolated nt placental cells (a) adhere to a substrate; and (b) express
CD200 and HLA-G, or express CD73, CD105, and CD200, or express CD200 and OCT-4, or
express CD73, CD105, and HLA-G, or express CD73 and CD105 and facilitate the formation of
one or more embryoid-like bodies in a population of placental cells that comprise the placental
stem cells when said population is cultured under conditions that allow formation of embryoid-
like bodies, or express OCT—4 and facilitate the formation of one or more embryoid-like bodies
in a population of placental cells that comprise the tal stem cells when said population is
cultured under conditions that allow formation of embryoid—like bodies; wherein said
composition detectably suppresses the growth or proliferation of tumor cells, or is anti-cancer or
antiviral. In a specific embodiment, the composition further comprises a plurality of said
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isolated placental adherent cells. In another specific embodiment, the composition ses a
plurality of non—placental cells. In a more specific embodiment, said non-placental cells
comprise CD34+ cells, e.g., poietic progenitor cells, such as peripheral blood
poietic progenitor cells, cord blood hematopoietic progenitor cells, or placental blood
hematopoietic progenitor cells. The non-placental cells can also comprise stem cells, such as
mesenchymal stem cells, e.g., bone marrow-derived mesenchymal stem cells. The non-placental
cells can also be one or more types of adult cells or cell lines. In another specific embodiment,
the composition comprises an anti-proliferative agent, e.g., an anti-MIP-lot or anti-MIP-lB
antibody.
In a specific embodiment, culture medium ioned by one of the cells or cell
combinations described above is obtained from a plurality of isolated adherent placental cells co-
cultured with a plurality of tumor cells at a ratio of about 1:1, about 2: 1, about 3:1, about 4: 1, or
about 5:1 isolated adherent placental cells to tumor cells. For example, the conditioned e
medium or supernatant can be obtained from a culture comprising about 1 X 105 isolated
adherent placental cells, about 1 X 106 ed adherent placental cells, about 1 X 107 isolated
adherent placental cells, or about 1 X 108 isolated adherent placental cells, or more. In r
c embodiment, the conditioned culture medium or atant is obtained from a co-
culture comprising about 1 X 105 to about 5 X 105 isolated adherent placental cells and about 1 X
105 tumor cells, about 1 X 106 to about 5 X 106 isolated adherent tal cells and about 1 X 106
tumor cells; about 1 X 107 to about 5 X 107 isolated adherent placental cells and about 1 X 107
tumor cells, or about 1 X 108 to about 5 X 108isolated adherent placental cells and about 1 X 108
tumor cells.
.2. Methods of Producing NK Cells
NK cells may be produced from hematopoietic cells, e. g., hematopoietic stem or
progenitors from any source, e. g., placental , placental ate, umbilical cord blood,
placental blood, peripheral blood, spleen, liver, or the like.
One important source of natural killer cells and cells that can be used to derive natural
killer cells as described above is the placenta, for example, full-term placenta, e. g., full-term
human placenta. Placental perfusate comprising placental perfusate cells that can be obtained,
for example, by the methods disclosed in US. Patent Nos. 7,045,148 and 7,468,276 and US.
Patent Application Publication No. 2009/0104164, the disclosures of each of which are hereby
incorporated in their entireties.
.2.1. Cell Collection Composition
The placental perfusate and perfusate cells, from which hematopoietic stem or
progenitors may be isolated, or useful in tumor ssion or the treatment of an individual
having tumor cells, cancer or a viral infection, e.g., in combination with the NK cells, e.g., NK
cell populations produced ing to the three-stage method provided herein, can be ted
by perfusion of a mammalian, e.g., human post-partum placenta using a placental cell collection
composition. Perfusate can be collected from the placenta by perfusion of the placenta with any
physiologically-acceptable solution, e.g., a saline solution, culture medium, or a more complex
cell collection composition, A cell collection ition suitable for perfusing a placenta, and
for the collection and preservation of perfusate cells is described in detail in related US.
Application Publication No. 2007/0190042, which is incorporated herein by reference in its
entirety.
The cell collection composition can se any physiologically-acceptable solution
suitable for the collection and/or culture of stem cells, for example, a saline solution (e.g.,
ate-buffered saline, Kreb’s solution, d Kreb’s on, Eagle’s solution, 0.9%
NaCl. etc), a culture medium (e.g., DMEM, , etc), and the like,
The cell collection composition can comprise one or more components that tend to
preserve placental cells, that is, prevent the placental cells from dying, or delay the death of the
placental cells, reduce the number of placental cells in a tion of cells that die, or the like,
from the time of collection to the time of culturing. Such ents can be, e.g, an apoptosis
tor (e.g, a caspase inhibitor or INK inhibitor); a vasodilator (e.g., magnesium sulfate, an
antihypertensive drug, atrial natriuretic peptide (ANP), adrenocorticotropin, corticotropin-
releasing e, sodium nitroprusside, hydralazine, adenosine triphosphate, ine,
indomethacin or magnesium sulfate, a phosphodiesterase inhibitor, etc), a necrosis inhibitor
(e.g, 2-(1H—Indolyl)pentylamino-maleimide, pyrrolidine dithiocarbamate, or clonazepam),
a TNF-d inhibitor, and/or an oxygen-carrying perfluorocarbon (e.g., perfluorooctyl bromide,
perfluorodecyl bromide, etc).
The cell collection composition can comprise one or more tissue-degrading enzymes,
e.g., a metalloprotease, a serine protease, a neutral protease, a hyaluronidase, an RNase, or a
DNase, or the like. Such enzymes include, but are not limited to, enases (e.g., collagenase
I, II, III or IV, a collagenase from idium histolyticum, etc), dispase, thermolysin, elastase,
trypsin, LIBERASE, hyaluronidase, and the like.
The cell collection composition can comprise a bacteriocidally or iostatically
effective amount of an antibiotic. In certain non-limiting embodiments, the antibiotic is a
macrolide (e.g., tobramycin), a cephalosporin (e.g., cephalexin, cephradine, cefuroxime,
cefprozil, cefaclor, cefiXime or cefadroxil), a clarithromycin, an erythromycin, a penicillin (e.g.,
penicillin V) or a quinolone (e.g., ofloxacin, ciprofloxacin or xacin), a tetracycline, a
streptomycin, etc. In a particular embodiment, the antibiotic is active against Gram(+) and/or
Gram(—) bacteria, e.g, Pseudomonas aeruginosa, Staphylococcus aureus, and the like.
The cell collection composition can also comprise one or more of the following
compounds: adenosine (about 1 mM to about 50 mM); D-glucose (about 20 mM to about 100
mM); ium ions (about 1 mM to about 50 mM), a macromolecule of lar weight
greater than 20,000 daltons, in one embodiment, present in an amount sufficient to maintain
endothelial integrity and cellular viability (e.g., a synthetic or naturally occurring colloid, a
polysaccharide such as dextran or a hylene glycol present at about 25 g/l to about 100 g/l,
or about 40 g/l to about 60 g/l); an antioxidant (e.g., butylated hydroxyanisole, butylated
hydroxytoluene, glutathione, vitamin C or vitamin E present at about 25 uM to about 100 HM), a
reducing agent (e.g, N—acetylcysteine present at about 0.1 mM to about 5 mM); an agent that
prevents calcium entry into cells (e.g., verapamil present at about 2 uM to about 25 uM),
lycerin (e.g., about 0.05 g/L to about 0.2 g/L); an anticoagulant, in one embodiment,
present in an amount sufficient to help prevent clotting of residual blood (e.g, n or hirudin
present at a concentration of about 1000 units/l to about 100,000 1), or an amiloride
containing compound (e.g., amiloride, ethyl isopropyl amiloride, thylene amiloride,
dimethyl amiloride or isobutyl amiloride present at about 1.0 uM to about 5 uM).
.2.2. Collection and Handling of Placenta
Generally, a human ta is recovered shortly after its expulsion after birth. In one
embodiment, the placenta is recovered from a patient after informed consent and after a te
medical history of the patient is taken and is associated with the ta. In one ment,
the medical history continues after delivery.
Prior to ry of perfusate, the umbilical cord blood and placental blood are
removed. In certain embodiments, after ry, the cord blood in the placenta is recovered.
The placenta can be subjected to a conventional cord blood recovery process. Typically a needle
or cannula is used, with the aid of gravity, to exsanguinate the placenta (see, e. g., Anderson,
US. Patent No. 5,372,581; Hessel et 611., US. Patent No. 5,415,665). The needle or cannula is
usually placed in the umbilical vein and the placenta can be gently massaged to aid in draining
cord blood from the placenta. Such cord blood recovery may be performed commercially, e.g.,
LifeBank Inc., Cedar Knolls, N.J., ViaCord, Cord Blood Registry and CryoCell. In one
embodiment, the placenta is gravity drained without further manipulation so as to minimize
tissue disruption during cord blood recovery.
Typically, a ta is transported from the delivery or birthing room to r
location, e. g., a laboratory, for recovery of cord blood and tion of perfusate. The placenta
can be transported in a sterile, thermally insulated transport device (maintaining the ature
of the placenta between 20-28 CC), for example, by placing the placenta, with clamped proximal
umbilical cord, in a sterile zip—lock plastic bag, which is then placed in an insulated container. In
another embodiment, the placenta is orted in a cord blood collection kit substantially as
described in US. Patent No. 7,147,626. In one ment, the ta is delivered to the
laboratory four to twenty-four hours following delivery. In certain embodiments, the proximal
umbilical cord is clamped, for example within 4-5 cm (centimeter) of the insertion into the
placental disc prior to cord blood recovery. In other embodiments, the proximal umbilical cord
is clamped after cord blood recovery but prior to r processing of the placenta.
The placenta, prior to collection of the perfusate, can be stored under sterile
ions and at either room temperature or at a temperature of 5 to 25 °C (centigrade). The
placenta may be stored for a period of longer than forty eight hours, or for a period of four to
twenty-four hours prior to perfusing the placenta to remove any residual cord blood. The
placenta can be stored in an agulant solution at a temperature of 5 °C to 25 °C (centigrade).
Suitable anticoagulant solutions are well known in the art. For example, a solution of heparin or
warfaiin sodium can be used. In one embodiment, the agulant solution ses a
solution of heparin (e.g., 1% w/w in 121000 solution). In some embodiments, the exsanguinated
placenta is stored for no more than 36 hours before placental perfusate is collected.
.2.3. Placental Perfusion
] Methods of perfusing mammalian placentae and obtaining placental perfusate are
disclosed, e.g., in Hariri, US. Patent Nos. 7,045,148 and 7,255,879, and in US. Application
Publication Nos. 104164, 2007/0190042 and 20070275362, issued as US. Pat No.
8,057,788, the disclosures of each of which are hereby incorporated by reference herein in their
entireties.
Perfusate can be obtained by passage of perfusion solution, e.g., saline solution,
culture medium or cell collection compositions described above, through the placental
vasculature. In one ment, a mammalian placenta is ed by passage of perfusion
solution through either or both of the umbilical artery and umbilical vein. The flow of perfusion
solution through the placenta may be accomplished using, e.g., gravity flow into the placenta.
For example, the perfusion solution is forced through the placenta using a pump, e.g, a
altic pump. The umbilical vein can be, e.g., cannulated with a cannula, e.g., a TEFLON®
or plastic cannula, that is ted to a sterile tion apparatus, such as e tubing. The
sterile connection apparatus is connected to a perfusion manifold.
In preparation for perfusion, the placenta can be oriented in such a manner that the
umbilical artery and cal vein are d at the highest point of the placenta. The placenta
can be perfused by passage of a perfusion solution through the placental vasculature, or through
the tal vasculature and surrounding tissue. In one embodiment, the umbilical artery and
the umbilical vein are connected simultaneously to a pipette that is connected via a flexible
connector to a reservoir of the perfusion on. The perfusion solution is passed into the
umbilical vein and . The perfusion solution exudes from and/or passes through the walls of
the blood vessels into the surrounding tissues of the placenta, and is collected in a suitable open
vessel from the surface of the placenta that was attached to the uterus of the mother during
ion. The ion solution may also be introduced through the umbilical cord opening
and d to flow or percolate out of openings in the wall of the placenta which aced
with the maternal uterine wall. In another embodiment, the perfusion solution is passed through
the umbilical veins and collected from the umbilical artery, or is passed through the umbilical
artery and collected from the cal veins, that is, is passed through only the placental
vasculature (fetal tissue).
In one embodiment, for example, the umbilical artery and the umbilical vein are
connected simultaneously, e.g., to a pipette that is connected via a flexible connector to a
reservoir of the perfusion solution. The perfusion solution is passed into the umbilical vein and
2015/068069
artery. The perfusion solution exudes from and/or passes h the walls of the blood vessels
into the nding tissues of the placenta, and is collected in a suitable open vessel from the
surface of the ta that was attached to the uterus of the mother during gestation. The
perfusion solution may also be introduced through the umbilical cord g and allowed to
flow or ate out of openings in the wall of the placenta which interfaced with the maternal
uterine wall. Placental cells that are collected by this , which can be referred to as a
“pan” method, are typically a mixture of fetal and maternal cells.
In another embodiment, the perfusion solution is passed through the umbilical veins
and collected from the umbilical artery, or is passed through the umbilical artery and collected
from the umbilical veins. Placental cells collected by this method, which can be ed to as a
“closed circuit” method, are typically almost exclusively fetal.
The closed t perfusion method can, in one embodiment, be performed as
follows. A post-partum placenta is obtained within about 48 hours after birth. The umbilical
cord is d and cut above the clamp. The umbilical cord can be discarded, or can processed
to recover, e.g., cal cord stem cells, and/or to process the umbilical cord membrane for the
production of a biomaterial. The amniotic membrane can be retained during perfusion, or can be
separated from the chorion, e.g., using blunt dissection with the . If the amniotic
membrane is separated from the chorion prior to perfusion, it can be, e.g., discarded, or
processed, e.g., to obtain stem cells by enzymatic digestion, or to produce, e.g., an amniotic
membrane biomaterial, e.g., the biomaterial described in US. ation Publication No.
2004/0048796. After cleaning the placenta of all visible blood clots and residual blood, e. g.,
using sterile gauze, the umbilical cord vessels are exposed, e.g., by partially cutting the umbilical
cord membrane to expose a cross-section of the cord. The vessels are identified, and opened,
e. g., by advancing a closed alligator clamp through the cut end of each vessel. The apparatus,
e. g., plastic tubing connected to a perfusion device or peristaltic pump, is then inserted into each
of the tal arteries. The pump can be any pump suitable for the purpose, e.g, a peristaltic
pump. Plastic tubing, connected to a sterile collection reservoir, e.g, a blood bag such as a 250
mL collection bag, is then inserted into the placental vein. Alternatively, the tubing connected to
the pump is inserted into the placental vein, and tubes to a collection reservoir(s) are inserted into
one or both of the placental arteries. The placenta is then perfused with a volume of perfusion
solution, e. g., about 750 ml of ion solution. Cells in the perfusate are then collected, e.g.,
by centrifugation.
In one embodiment, the proximal umbilical cord is clamped during perfusion, and,
more specifically, can be clamped within 4-5 cm (centimeter) of the cord’s insertion into the
placental disc.
The first collection of perfusion fluid from a mammalian placenta during the
uination process is generally colored with residual red blood cells of the cord blood and/or
placental blood. The perfusion fluid becomes more colorless as ion proceeds and the
al cord blood cells are washed out of the placenta. Generally from 30 to 100 mL of
perfusion fluid is adequate to initially flush blood from the placenta, but more or less perfusion
fluid may be used depending on the ed results.
In certain embodiments, cord blood is removed from the placenta prior to perfusion
(e.g., by y drainage), but the ta is not flushed (e.g., perfused) with solution to remove
residual blood. In certain embodiments, cord blood is d from the placenta prior to
perfusion (e.g, by gravity drainage), and the placenta is flushed (e.g., perfused) with solution to
remove residual blood.
The volume of perfusion liquid used to perfuse the placenta may vary depending
upon the number of placental cells to be collected, the size of the placenta, the number of
collections to be made from a single placenta, etc. In various embodiments, the volume of
perfusion liquid may be from 50 mL to 5000 mL, 50 mL to 4000 mL, 50 mL to 3000 mL, 100
mL to 2000 mL, 250 mL to 2000 mL, 500 mL to 2000 mL, or 750 mL to 2000 mL. Typically,
the placenta is perfused with 0 mL of perfusion liquid following exsanguination.
The placenta can be ed a plurality of times over the course of several hours or
several days. Where the placenta is to be perfused a plurality of times, it may be maintained or
cultured under aseptic conditions in a container or other suitable vessel, and ed with a cell
collection composition, or a standard perfusion solution (e.g, a normal saline solution such as
phosphate buffered saline (“PB S”) with or without an anticoagulant (e.g., heparin, warfarin
sodium, in, bishydroxycoumarin), and/or with or without an antimicrobial agent (e.g., [3-
mercaptoethanol (0.1 mM); antibiotics such as streptomycin (e.g., at 40-100 , penicillin
(e.g., at 40 U/ml), amphotericin B (e.g., at 05 ug/ml). In one embodiment, an isolated placenta
is maintained or cultured for a period of time without collecting the perfusate, such that the
placenta is maintained or cultured for 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19,
, 21, 22, 23, or 24 hours, or 2 or 3 or more days before perfusion and collection of perfusate.
The perfused placenta can be ined for one or more additional time(s), e.g., 1, 2, 3, 4, 5, 6,
7, 8, 9, 10, 11,12, 13,14, 15,16, 17,18, 19, 20, 21, 22, 23, 24 or more hours, and perfused a
second time with, e.g, 700—800 mL perfusion fluid. The placenta can be perfused 1, 2, 3, 4, 5 or
more times, for example, once every 1, 2, 3, 4, 5 or 6 hours. In one embodiment, perfusion of
the placenta and collection of perfusion solution, e.g, placental cell collection composition, is
repeated until the number of recovered nucleated cells falls below 100 cells/ml. The perfusates
at different time points can be further processed individually to recover time-dependent
populations of cells, e.g., total nucleated cells. Perfusates from ent time points can also be
pooled.
.2.4. Placental Perfusate and Placental Perfusate Cells
] Typically, placental ate from a single placental perfusion comprises about 100
million to about 500 million nucleated cells, including hematopoietic cells from which NK cells,
e. g., NK cells produced according to the three-stage method described herein, may be produced
by the method disclosed herein. In certain embodiments, the placental perfusate or perfusate
cells se CD34+ cells, e.g., hematopoietic stem or progenitor cells. Such cells can, in a
more specific embodiment, comprise CD34+CD45_ stem or progenitor cells, D45+ stem
or progenitor cells, or the like. In certain embodiments, the perfusate or perfusate cells are
eserved prior to isolation of hematopoietic cells therefrom. In certain other embodiments,
the placental ate ses, or the perfusate cells comprise, only fetal cells, or a
combination of fetal cells and maternal cells.
.2.5. Hematopoietic Cells
In various embodiments, NK cells are produced from hematopoietic cells, e.g.,
hematopoietic stem cells or progenitor cells.
Hematopoietic cells as used herein can be any poietic cells able to differentiate
into NK cells, e.g., precursor cells, hematopoietic itor cells, hematopoietic stem cells, or
the like. Hematopoietic cells can be obtained from tissue sources such as, e.g., bone marrow,
cord blood, placental blood, peripheral blood, liver or the like, or combinations f.
Hematopoietic cells can be obtained from placenta. In a specific embodiment, the hematopoietic
cells are obtained from placental perfusate. Hematopoietic cells from placental perfusate can
comprise a mixture of fetal and maternal hematopoietic cells, e.g., a mixture in which al
cells comprise greater than 5% of the total number of hematopoietic cells. In one embodiment,
hematopoietic cells from placental perfusate comprise at least about 90%, 95%, 98%, 99% or
99.5% fetal cells.
In another specific embodiment, the hematopoietic cells, e.g., hematopoietic stem
cells or progenitor cells, are obtained from placental perfusate, umbilical cord blood or
peripheral blood. In another specific embodiment, the hematopoietic cells, e.g., hematopoietic
stem cells or itor cells, are combined cells from placental perfusate and cord blood, e. g.,
cord blood from the same placenta as the perfusate. In r specific embodiment, said
umbilical cord blood is isolated from a placenta other than the placenta from which said
placental perfusate is ed. In certain embodiments, the ed cells can be obtained by
pooling or combining the cord blood and placental ate. In certain embodiments, the cord
blood and placental perfusate are combined at a ratio of 100: 1, 95:5, 90:10, 85: 15, 80:20, 75:25,
70:30, 65:35, 60:40, 55:45: 50:50, 45:55, 40:60, 35:65, 30:70, 25:75, 20:80, 15:85, 10:90, 5:95,
100:1, 95:1, 90:1, 85:1, 80:1, 75:1, 70:1, 65:1, 60:1, 55:1, 50:1, 45:1, 40:1, 35:1, 30:1, 25:1, 20:1 7
:1,10:1,5:1,1:1,1:5,1:10,1:15,1:20,1:25,1:30,1:35,1:40,1:45,1:50,1:55,]:60,1:65,
1:70, 1:75, 1:80, 1:85, 1:90, 1:95, 1:100, or the like by volume to obtain the combined cells. In
a c embodiment, the cord blood and placental perfusate are combined at a ratio of from
:1 to 1:10, from 5:1 to 1:5, or from 3:1 to 1:3. In another specific embodiment, the cord blood
and placental perfusate are ed at a ratio of 10:1, 5:1, 3:1, 1:1, 1:3, 1:5 or 1:10. In a more
specific embodiment, the cord blood and placental perfusate are combined at a ratio of 8.5: 1.5
(85%: 15%).
In certain embodiments, the cord blood and placental perfusate are combined at a
ratio of 100:1, 95:5, 90:10, 85:15, 80:20, 75:25, 70:30, 65:35, 60:40, 55:45: 50:50, 45:55, 40:60,
:65, 30:70, 25:75, 20:80, 15:85, 10:90, 5:95, 1001, 95:1, 90:1, 85:1, 80:1, 75:1, 70:1, 65:1,
60:1, 55:1, 50:1, 45:1, 40:1, 35:1, 30:1, 25:1, 20:1, 15:1, 10:1, 5:1, 1:1, 1:5, 1:10, 1:15, 1:20,
1:25,1:30,1:35,1:40,1:45,1:50,1:55,1:60,1:65,1:70,1:75,1:80,l:85,1:90,1:95,1:100,or
the like by total nucleated cells (INC) content to obtain the combined cells. In a specific
embodiment, the cord blood and placental perfusate are combined at a ratio of from 10:1 to 10: 1,
from 5:1 to 1:5, or from 3:1 to 1: 3. In r specific embodiment, the cord blood and
placental perfusate are combined at a ratio of 10:1, 5:1, 3:1, 1:1, 1:3,1:5 or 1:10.
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In another specific embodiment, the hematopoietic cells, e.g., hematopoietic stem
cells or itor cells, are from both umbilical cord blood and placental perfusate, but wherein
said umbilical cord blood is ed from a placenta other than the placenta from which said
placental perfusate is obtained.
In certain ments, the hematopoietic cells are CD34+ cells. In specific
embodiments, the hematopoietic cells useful in the methods sed herein are CD34+CD3 8+ or
CD34+CD3 8—. In a more specific embodiment, the hematopoietic cells are CD34+CD3 8‘Lin‘. In
another specific embodiment, the hematopoietic cells are one or more of CD2‘, CD3‘, ,
CD11c‘, CD14_, CD16‘, CD19‘, CD24‘, CD56: CD66b‘ and/or glycophofin A‘. In another
specific embodiment, the hematopoietic cells are CD2‘, CD3‘, CD11b‘, CD11c‘, CD14‘, CD16‘,
CD19‘, CD24‘, CD56‘, CD66b‘ and glycophon'n A‘. In another more specific ment, the
hematopoietic cells are CD34+CD38_CD33_CD117_. In another more specific embodiment, the
hematopoietic cells are CD34+CD38_CD33_CD117‘CD235‘CD36‘.
In another embodiment, the hematopoietic cells are CD45+. In another specific
embodiment, the hematopoietic cells are CD34+CD45+. In another embodiment, the
hematopoietic cell is . In a specific embodiment, the hematopoietic cell is CD34+Thy—1+,
In another embodiment, the poietic cells are CD133+. In specific embodiments, the
hematopoietic cells are CD34+CD133+ or CD133+Thy-1+. In another specific embodiment, the
CD34+ poietic cells are CXCR4+. In another specific embodiment, the CD34+
poietic cells are CXCR4'. In another embodiment, the hematopoietic cells are positive
for KDR (vascular growth factor receptor 2). In specific embodiments, the hematopoietic cells
are CD34+KDR+, CD133+KDR+ or Thy-1+KDR+. In certain other embodiments, the
hematopoietic cells are positive for de dehydrogenase (ALDH+), e.g, the cells are
CD34+ALDH+.
In certain other ments, the CD34+ cells are CD45‘. In specific embodiments,
the CD34+ cells, e.g., CD34+, CD45‘ cells express one or more, or all, of the miRNAs hsa-miR-
380, hsa-miR—S 12, hsa-miR-517, hsa—miR—S 18c, hsa—miR—S 19b, and/or hsa—miR-520a.
In certain embodiments, the hematopoietic cells are CD347
The poietic cells can also lack certain markers that indicate lineage
commitment, or a lack of developmental naiveté. For example, in another embodiment, the
hematopoietic cells are HLA—DR‘. In specific embodiments, the hematopoietic cells are
CD34+HLA-DR‘, CD133+HLA—DR‘, HLA-DR‘ or LA-DR‘ In another
embodiment, the hematopoietic cells are negative for one or more, preferably all, of lineage
markers CD2, CD3, CD1 1b, CD1 lc, CD14, CD16, CD19, CD24, CD56, CD66b and
glycophorin A.
Thus, hematopoietic cells can be selected for use in the methods disclosed herein on
the basis of the presence of markers that indicate an undifferentiated state, or on the basis of the
absence of e markers indicating that at least some lineage differentiation has taken place.
Methods of isolating cells, including hematopoietic cells, on the basis of the presence or absence
of specific markers are discussed in detail below.
Hematopoietic cells as used herein can be a substantially homogeneous population,
e.g., a population comprising at least about 95%, at least about 98% or at least about 99%
hematopoietic cells from a single tissue source, or a population comprising hematopoietic cells
exhibiting the same hematopoietic ssociated cellular markers. For example, in various
ments, the hematopoietic cells can comprise at least about 95%, 98% or 99%
hematopoietic cells from bone marrow, cord blood, placental blood, peripheral blood, or
placenta, e.g., placenta perfusate.
Hematopoietic cells as used herein can be obtained from a single individual, e.g.,
from a single placenta, or from a plurality of individuals, e.g., can be pooled. Where the
hematopoietic cells are obtained from a plurality of individuals and pooled, the hematopoietic
cells may be obtained from the same tissue source. Thus, in various ments, the pooled
poietic cells are all from ta, e.g, placental perfusate, all from placental blood, all
from umbilical cord blood, all from eral blood, and the like.
Hematopoietic cells as used herein can, in certain embodiments, comprise
hematopoietic cells from two or more tissue sources. For example, in certain embodiments,
when hematopoietic cells from two or more sources are combined for use in the methods ,
a plurality of the hematopoietic cells used to e NK cells comprise hematopoietic cells
from placenta, e.g., placenta perfusate. In various embodiments, the hematopoietic cells used to
produce NK cells comprise hematopoietic cells from placenta and from cord blood; from
placenta and peripheral blood; from placenta and tal blood, or placenta and bone .
In a preferred embodiment, the hematopoietic cells comprise hematopoietic cells from placental
perfusate in combination with hematopoietic cells from cord blood, wherein the cord blood and
placenta are from the same individual, 1'.e., wherein the perfusate and cord blood are matched. In
embodiments in which the hematopoietic cells comprise hematopoietic cells from two tissue
sources, the hematopoietic cells from the s can be combined in a ratio of, for example,
1:10, 2:9, 3:8, 4:7:, 5:6, 6:5, 7:4, 8:3, 9:2,1:10,1:9,1:8,1:7,1:6,1:5,1:4,1:3,1:2,1:1, 2:1, 3:1,
4:1, 5:1, 6:1, 7:1, 8:1 or 9:1.
.2.5.1. Placental Hematopoietic Stem Cells
In certain embodiments, the hematopoietic cells are placental hematopoietic cells. As
used herein, “placental hematopoietic cells” means hematopoietic cells obtained from the
placenta itself, and not from placental blood or from cal cord blood. In one embodiment,
placental hematopoietic cells are CD34+. In a specific embodiment, the placental hematopoietic
cells are predominantly (e.g., at least about 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%,
95% or 98%) CD34+CD3 8‘ cells. In another specific ment, the placental hematopoietic
cells are predominantly (e.g., at least about 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%,
95% or 98%) CD34+CD3 8+ cells. Placental hematopoietic cells can be obtained from a post-
partum mammalian (e.g., human) ta by any means known to those of skill in the art, e.g.,
by perfusion.
In another embodiment, the placental hematopoietic cell is CD457 In a specific
embodiment, the hematopoietic cell is CD34+CD45_. In another specific embodiment, the
placental poietic cells are CD34+CD45+.
.2.6. Methods of Producing PiNK Cells
In various embodiments, PiNK cells are derived from placental cells. In c
embodiments, the placental cells are obtained from placental ate, e.g., human placental
ate. In c embodiments, the placental cells are obtained from placental tissue that has
been mechanically and/or enzymatically disrupted.
.2.6.1. Obtaining PiNK Cells from Placental Perfusate
In one embodiment, PiNK cells are collected by obtaining placental ate, then
contacting the placental perfusate with a composition that specifically binds to CD56+ cells, e.g.,
an dy against CD56, followed by isolating of CD56+ cells on the basis of said binding to
form a population of CD56+ cells. The population of CD56+ cells comprises an isolated
population of natural killer cells. In a specific embodiment, CD56+ cells are contacted with a
composition that specifically binds to CD16" cells, e.g., an antibody against CD16, and the
CD16+ cells are excluded from the population of CD56+ cells. In another specific embodiment,
CD3+ cells are also excluded from the population of CD56+ cells.
In one embodiment, PiNK cells are obtained from placental perfusate as follows.
Post-partum human placenta is exsanguinated and perfused, e.g., with about 200-800 mL of
perfusion solution, through the placental vasculature only. In a specific embodiment, the
placenta is drained of cord blood and flushed, e.g., with perfusion solution, through the placental
vasculature to remove residual blood prior to said perfusing. The perfusate is collected and
processed to remove any residual erythrocytes. Natural killer cells in the total nucleated cells in
the perfusate can be isolated on the basis of expression of CD56 and CD16. In certain
embodiments, the isolation of PiNK cells comprises isolation using an antibody to CD56,
wherein the isolated cells are CD56+. In another embodiment, the isolation of PiNK cells
comprises isolation using an antibody to CD16, wherein the isolated cells are CD167 In another
embodiment, the isolation of PiNK cells comprises isolation using an antibody to CD56, and
exclusion of a ity of non—PiNK cells using an antibody to CD16, wherein the ed cells
comprise CD56+, CD16_ cells.
Cell tion can be accomplished by any method known in the art, e.g,
fluorescence-activated cell sorting (FACS), or, preferably, magnetic cell sorting using
microbeads conjugated with specific antibodies. Magnetic cell separation can be performed and
automated using, e.g, an C STM Separator (Miltenyi).
In another aspect, the process of isolating placental natural killer cells (e.g., PiNK
cells) comprises obtaining a plurality of tal cells, and isolating natural killer cells from
said plurality of placental cells. In a specific embodiment, the placental cells are, or comprise,
placental perfusate cells, e.g., total nucleated cells from placental ate. In another specific
embodiment, said plurality of tal cells are, or comprise, placental cells obtained by
mechanical and/or enzymatic digestion of placental tissue. In r ment, said isolating
is med using one or more antibodies. In a more specific embodiment, said one or more
antibodies comprises one or more of antibodies to CD3, CD16 or CD56. In a more specific
ment, said isolating ses isolating CD56+ cells from CD56‘ cells in said plurality of
placental cells. In a more c embodiment, said isolating ses isolating CD56+, CD16—
2015/068069
placental cells, e. g., placental l killer cells, e.g, PiNK cells, from placental cells that are
CD56‘ or CD16+. In a more specific embodiment, said isolating comprises isolating CD56“,
CD16‘, CD3‘ placental cells from placental cells that are CD56‘, CD16+, or CD3+. In another
ment, said process of isolating placental natural killer cells results in a population of
placental cells that is at least 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98% or at
least 99% CD56+, CDl6_ l killer cells.
In certain embodiments, the placental natural killer cells, e.g., PiNK cells, have been
expanded in culture. In certain other embodiments, the placental perfusate cells have been
expanded in culture. In a specific embodiment, said placental perfusate cells have been
expanded in the ce of a feeder layer and/or in the presence of at least one ne. In a
more specific ment, said feeder layer comprises K562 cells or peripheral blood
mononuclear cells. In another more specific embodiment, said at least one cytokine is
interleukin-2. In specific ments, the PiNK cells have been cultured, e.g., expanded in
culture, for atleast, about, or at most 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, ll, 12, 13, 14, 15, 16, 17, 18, 19,
, 21, 22, 23, 24, 25, 26, 27 or 28 days. In a specific embodiment, the PiNK cells are cultured
for about 21 days.
.2.6.2. tion and Digestion of Placental Tissue to Obtain PiNK Cells
Placental natural killer cells, e.g., PiNK cells, can also be ed from placental
tissue that has been mechanically and/or enzymatically disrupted.
Placental tissue can be disrupted using one or more tissue-degrading enzymes, e.g., a
metalloprotease, a serine protease, a l protease, an RNase, or a DNase, or the like. Such
enzymes include, but are not limited to, enases (e.g., collagenase I, II, III or IV, a
collagenase from Clostridium histolyticum, etc), dispase, thermolysin, elastase, trypsin,
LIBERASE, hyaluronidase, and the like. Typically after digestion, the digested tissue is passed
h a strainer or filter to remove partially-digested cell clumps, leaving a substantially
single—celled suspension.
After a suspension of placental cells is obtained, natural killer cells can be isolated
using, e.g., antibodies to CD3 and CD56. In a specific embodiment, placental natural killer cells
are isolated by selecting for cells that are CD56+ to produce a first cell population, contacting
said first cell population with antibodies specific for CD3 and/or CD16; and removing cells from
said first cell population that are CD3+ or CD56+, thereby producing a second population of cells
that is substantially CD56+ and CD3‘, CD56+ and CD16‘, or CD56, CD3‘ and CD16‘.
In one embodiment, magnetic beads are used to isolate placental natural killer cells
from a suspension of placental cells. The cells may be isolated, e.g., using a magnetic activated
cell sorting (MACS) que, a method for separating les based on their ability to bind
magnetic beads (e.g., about 05-100 um diameter) that comprise one or more specific antibodies,
e.g, anti-CD56 antibodies. A variety of useful modifications can be performed on the magnetic
microspheres, including covalent addition of antibody that specifically recognizes a particular
cell surface molecule or . The beads are then mixed with the cells to allow binding. Cells
are then passed through a magnetic field to separate out cells having the specific cell surface
marker. In one embodiment, these cells can then isolated and re-mixed with magnetic beads
coupled to an antibody against additional cell surface markers. The cells are again passed
h a magnetic field, isolating cells that bound both the antibodies. Such cells can then be
diluted into separate dishes, such as microtiter dishes for clonal isolation.
.2.7. Methods of Producing ted NK Cells
ted NK cells may be produced from hematopoietic cells, which are bed
above. In certain embodiment, the activated NK cells are produced from expanded
hematopoietic cells, e.g., poietic stem cells and/or hematopoietic progenitor cells. In a
specific embodiment, the hematopoietic cells are expanded and differentiated, continuously, in a
first medium without the use of feeder cells. The cells are then cultured in a second medium in
the presence of feeder cells. Such isolation, expansion and differentiation can be performed in a
central facility, which provides expanded hematopoietic cells for shipment to decentralized
expansion and differentiation at points of use, e.g., hospital, ry base, military front line, or
the like.
In some embodiments, production of activated NK cells comprises expanding a
population of hematopoietic cells. During cell expansion, a ity of hematopoietic cells
within the hematopoietic cell population differentiate into NK cells.
In one embodiment, the process of producing a population of activated natural killer
(NK) cells comprises: (a) seeding a population of hematopoietic stem or itor cells in a first
medium comprising interleukin-15 (IL-15) and, optionally, one or more of stem cell factor
(SCF) and interleukin-7 (IL-7), n said IL-15 and optional SCF and lL-7 are not comprised
within an undefined component of said medium, such that the population expands, and a
plurality of hematopoietic stem or progenitor cells within said tion of hematopoietic stem
or progenitor cells entiate into NK cells during said expanding; and (b) ing the cells
from step (a) in a second medium comprising interleukin-2 (IL-2), to produce a population of
activated NK cells.
] In another embodiment, activated NK cells as described herein are produced by a
two-step process of expansion/ differentiation and maturation ofNK cells. The first and second
steps comprise culturing the cells in media with a unique combination of cellular factors. In
certain ments, the process involves (a) culturing and expanding a population of
hematopoietic cells in a first medium, wherein a plurality of hematopoietic stem or progenitor
cells within the hematopoietic cell population differentiate into NK cells; and (b) ing the
NK cells from step (a) in a second medium, wherein the NK cells are further ed and
differentiated, and wherein the NK cells are maturated (e.g., activated or otherwise possessing
cytotoxic activity). In certain embodiments, the process includes no intermediary steps between
step (a) and (b), no additional culturing steps prior to step (a), and/or no additional steps (e.g.,
maturation step) after step (b).
.2.7.1. First Step
In certain embodiments, the process of producing ted NK cells comprises a first
step of ing and expanding a population of poietic cells in a first medium, wherein a
plurality of hematopoietic stem or progenitor cells within the hematopoietic cell population
differentiate into NK cells.
Without wishing to be bound by any parameter, mechanism or theory, e of the
hematopoietic cells as described herein results in continuous expansion of the hematopoietic
cells and differentiation ofNK cells from said cells. In certain embodiments, hematopoietic
cells, e. g., stem cells or itor cells, used in the processes described herein are expanded and
differentiated in the first step using a feeder layer. In other embodiments, hematopoietic cells,
e. g., stem cells or progenitor cells, are expanded and differentiated in the first step without the
use of a feeder layer.
Feeder cell-independent expansion and differentiation of hematopoietic cells can take
place in any container compatible with cell culture and expansion, e.g., flask, tube, beaker, dish,
multiwell plate, bag or the like. In a c embodiment, feeder cell-independent ion of
hematopoietic cells takes place in a bag, e.g, a flexible, gas-permeable fluorocarbon culture bag
(for example, from American Fluoroseal). In a specific embodiment, the container in which the
hematopoietic cells are expanded is suitable for ng, e.g, to a site such as a hospital or
military zone wherein the expanded NK cells are further expanded and differentiated.
In certain embodiments, hematopoietic cells are ed and differentiated, e.g, in a
continuous fashion, in a first culture medium. In one embodiment, the first e medium is an
animal-component free medium. Exemplary animal component-free media useful in the
processes described herein include, but are not limited to, Basal Medium Eagle (BME),
Dulbecco’s d Eagle’s Medium , Glasgow Minimum Essential Medium
(GMEM), Dulbecco’s Modified Eagle’s Medium/Nutrient Mixture F-l2 Ham (DMEM/F-l2),
Minimum Essential Medium (MEM), Iscove’s d co’s Medium (IMDM), Nutrient
Mixture F-10 Ham (Ham’s F-lO), Nutrient Mixture F-l2 Ham (Ham’s F-12), RPMI-1640
Medium, Williams’ Medium E, STEMSPAN® (Cat. No. Stem Cell Technologies, Vancouver,
Canada), Glycostem Basal Growth Medium (GBGM®), AIM-V® medium (Invitrogen), XVIVOTM
(Lonza), x—v1voTM 15 (Lonza), OPTMIZER (Invitrogen), STEMSPAN® H3000
(STEMCELL Technologies), CELLGRO COMPLETETM (Mediatech), or any modified variants
or combinations thereof. In a specific embodiment of any of the embodiments herein, the
medium is not GBGM®.
In preferred embodiments, the first culture medium comprises one or more of
medium supplements (e.g., nutrients, cytokines and/or factors). Medium supplements suitable
for use in the processes bed herein include, for example without limitation, serum such as
human serum AB, fetal bovine serum (PBS) or fetal calf serum (FCS), ns, bovine serum
albumin (BSA), amino acids (e.g., L-glutamine), fatty acids (e.g., oleic acid, linoleic acid or
palmitic acid), insulin (e.g., recombinant human insulin), transferrin (iron ted human
transferrin), B-mercaptoethanol, stem cell factor (SCF), Fms-like-tyrosine kinase 3 ligand (Flt3-
L), nes such as interleukin-2 (IL-2), interleukin-7 (IL-7), interleukin-15 (IL-15),
thrombopoietin (Tpo), heparin, or yl-carnitine (also referred to as acetylcamitine, O-
acetyl-L-camitine or OAC). In a specific ment, the medium used herein comprises
human serum AB. In another specific embodiment, the medium used herein comprises FBS. In
another specific embodiment, the medium used herein comprises OAC.
In certain embodiments, the first medium does not comprise one or more of,
granulocyte colony-stimulating factor (G—CSF), granulocyte/macrophage colony stimulating
factor (GM-CSF), interleukin-6 (IL-6), macrophage inflammatory Protein 1 0t (MIPlOt), or
leukemia inhibitory factor (LIF).
Thus, in one aspect, described herein is a ep process of producing NK cells,
wherein said first step comprises expanding and differentiating a population of hematopoietic
cells in a first culture medium in the absence of feeder cells, wherein a plurality of hematopoietic
cells within said population of hematopoietic cells differentiate into NK cells during said
expanding, and wherein the medium comprises SCF at a concentration of about 1 to about 150
ng/mL, IL-2 at a concentration of about 50 to about 1500 IU/mL, E-7 at a concentration of
about 1 to about 150 ng/mL, IL—15 at a concentration 1 to about 150 ng/mL and heparin at a
concentration of about 0.1 to about 30 IU/mL, and wherein said SCF, IL-2, IL-7, IL-15 and
heparin are not comprised within an undefined component of said medium (e.g., serum). In
certain embodiments, said medium comprises one or more of O-acetyl-carnitine (also referred to
as carnitine, O—acetyl-L-carnitine or OAC), or a nd that affects acetyl-CoA g
in onia, thiazovivin, Y-27632, pyintegrin, Rho kinase (ROCK) inhibitors, caspase
inhibitors or other anti-apoptotic compounds/peptides, NOVA-RS (Sheffield Bio-Science) or
other small-molecule growth enhancers. In certain embodiments, said medium comprises
nicotinamide. In certain embodiments, said medium comprises about 0.5 mM-10 mM OAC. In
one embodiment, said medium comprises an® H3000, and/or 12 and about 0.5,
1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 mM OAC. In a specific embodiment, said medium is GBGM®. In
another specific embodiment, the medium is not GBGM®. In another specific embodiment, said
medium comprises an® H3000 and about 5 mM of OAC. In another specific
embodiment, said medium comprises DMEM:F12 and about 5 mM of OAC. The OAC can be
added anytime during the culturing processes described herein. In certain embodiments, said
OAC is added to the first medium and/or during the first culturing step. In some embodiments,
said OAC is added to the first medium on Day 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 , 11, 12, 13, 14, 15,
16, 17, 18, 19, 20, 21 of the culture. In a c embodiment, said OAC is added to the first
medium on Day 7 of the first culturing step. In a more c embodiment, said OAC is added
to the first medium on Day 7 of the e and is t throughout the first and second
culturing steps. In certain embodiments, said OAC is added to the second medium and/or during
the second culturing step. In some embodiments, said OAC is added to the second medium on
Day 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35 ofthe culture.
] In r c embodiment, said medium is HVIDM supplemented with about 5-
% BSA, about 1-10 ug/mL inant human insulin, about 10—50 ug/mL iron saturated
human transferrin and about 10-50 uM B-mercaptoethanol. In another specific embodiment, said
medium does not se one or more, or any, of IL-1 1, IL-3, homeoboX-B4 (HoxB4), and/or
methylcellulose.
In other specific embodiments, said medium comprises SCF at a concentration of
about 0.1 to about 500 ng/mL; about 5 to about 100 ng/mL; or about 20 ng/mL. In other specific
embodiments, said medium comprises IL-2 at a concentration of about 10 to about 2000 IU/mL,
or about 100 to about 500 IU/mL, or about 200 IU/mL. In other specific embodiments, said
medium comprises IL—7 at a concentration of about 0.1 to about 500 ng/mL; about 5 to about 100
ng/mL; or about 20 ng/mL. In other specific embodiments, said medium comprises IL-15 at a
concentration of about 0.1 to about 500 ng/mL, about 5 to about 100 ng/mL; or about 10 ng/mL.
In other specific embodiments, said medium comprises heparin at concentration of about 0.05 to
about 100 U/mL, or about 0.5 to about 20 U/ml, or about 1.5 U/mL.
In yet other specific embodiment, said medium further comprises Fms-like-tyrosine
kinase 3 ligand (Flt-3L) at a concentration of about 1 to about 150 ng/mL, thrombopoietin (Tpo)
at a tration of about 1 to about 150 ng/mL, or a combination of both. In other specific
embodiments, said medium comprises Flt-3L at a concentration of about 0.1 to about 500 ng/mL;
about 5 to about 100 ng/mL, or about 20 ng/mL. In other specific embodiments, said medium
comprises Tpo at a concentration of about 0.1 to about 500 ng/mL; about 5 to about 100 ng/mL,
or about 20 ng/mL.
[0023 7] In a more specific embodiment, the first culture medium is GBGM®, which
comprises about 20 ng/mL SCF, about 20 ng/mL IL-7, about 10 ng/mL IL-15. In another more
c embodiment, the first culture medium is GBGM®, which ses about 20 ng/mL
SCF, about 20 ng/mL Flt3-L, about 200 IU/mL IL-2, about 20 ng/mL IL-7, about 10 ng/mL IL-
, about 20 ng/mL Tpo, and about 1.5 U/mL heparin. In another specific embodiment, said first
e medium further comprises 10% human serum (e.g., human serum AB) or fetal serum
(e. g., FB S). In a specific embodiment of any of the embodiments herein, the medium is not
GBGM®.
In another embodiment, hematopoietic cells are expanded by culturing said cells, e.g.,
in said first medium, in contact with an immunomodulatory compound, e.g., a TNF-or inhibitory
compound, for a time and in an amount sufficient to cause a detectable increase in the
proliferation of the hematopoietic cells over a given time, compared to an equivalent number of
hematopoietic cells not contacted with the immunomodulatory compound. See, e. g., US. Patent
Application Publication No. 2003/023 5909, the disclosure of which is hereby incorporated by
reference in its entirety. In certain embodiments, the immunomodulatory compound is an
amino-substituted isoindoline. In a preferred embodiment, the immunomodulatory compound is
3-(4-amino-1—oxo-1,3—dihydroisoindolyl)—piperidine-2,6-dione, 3—(4'aminoisolindoline-1'—
one)piperidine-2,6-dione, 4-(amino)(2,6-dioxo(3-piperidyl))—isoindoline-1,3-dione, or 4-
Amino(2,6—dioxopiperidin—3—yl)isoindole-1,3-dione. In another preferred embodiment, the
modulatory compound is pomalidomide, or lenalidomide.
Specific examples of immunomodulatory nds include, but are not limited to,
cyano and carboxy derivatives of substituted es such as those disclosed in US. patent no.
,929,117, 2-(2,6-dioxofluoropiperidin-3yl) isoindolines and 1,3—dioxo(2,6-dioxo
fiuoropiperidineyl) olines such as those described in US. patent no. 5,874,448, the tetra
substituted -dioxopiperdinyl)—1-oxoisoindolines described in US. patent no. 5,798,368,
1-oxo and 1,3—dioxo-2—(2,6-dioxopiperidin-3—yl) isoindolines (e.g., 4—methyl derivatives of
thalidomide and EM-12), including, but not d to, those disclosed in US. patent no.
,63 5,517; and a class of non-polypeptide cyclic amides disclosed in US. patent nos. 5,698,579
and 5,877,200, analogs and derivatives of thalidomide, including hydrolysis products,
metabolites, derivatives and precursors of thalidomide, such as those described in US. patent
nos. 5,593,990, 5,629,327, and 6,071,948 to D’Amato, aminothalidomide, as well as analogs,
ysis products, lites, derivatives and precursors of aminothalidomide, and
substituted 2-(2,6-dioxopiperidinyl) imides and substituted 2-(2,6-dioxopiperidin-3 —yl)-
1-oxoisoindoles such as those described in US. patent nos. 6,281,230 and 6,316,471, isoindole-
imide compounds such as those described in US. patent application no. 09/972,487 filed on
October 5, 2001, US. patent application no. 10/032,286 filed on December 21, 2001, and
ational Application No. 01/50401 (International Publication No. W0 02/059106).
The entireties of each of the patents and patent applications identified herein are incorporated
herein by reference. Immunomodulatory compounds do not include thalidomide.
In another ment, immunomodulatory compounds include, but are not limited
to, 1-oxo-and 1,3 dioxo(2,6-dioxopiperidinyl) isoindolines substituted with amino in the
2015/068069
benzo ring as described in US. Patent no. 5,635,517 which is incorporated herein by reference.
These compounds have the structure
or.»X\ R2 NH
wherein one of X and Y is C=O, the other ofX and Y is C=O or CH2, and R2 is hydrogen
or lower alkyl, or a pharmaceutically acceptable salt, e, solvate, clathrate, enantiomer,
diastereomer, racemate, or mixture of stereoisomers thereof.
In another embodiment, specific immunomodulatory compounds include, but are not
limited to:
1-oxo(2,6-dioxopiperidinyl)—4—aminoisoindoline,
1-oxo—2—(2,6-dioxopiperidin-3—yl)—5-aminoisoindoline;
1-oxo(2,6-dioxopiperidinyl)—6-aminoisoindoline,
1-oxo(2,6-dioxopiperidiny1)—7-aminoisoindoline;
1,3-dioxo(2,6-dioxopiperidin-3 -yl)—4-aminoisoindoline, and
1,3-dioxo-2—(2,6-dioxopiperidin-3 -y1)aminoisoindoline.
Other specific modulatory compounds belong to a class of substituted 2—(2,6-
dioxopiperidin-3 -yl) phthalimides and tuted -dioxopiperidinyl)—1—oxoisoindoles,
such as those described in US. patent nos. 6,281,230; 6,316,471, 6,335,349; and 6,476,052, and
International Patent Application No. 97/13375 (International Publication No. WO
98/03502), each of which is incorporated herein by reference. Compounds representative of this
class are of the formulas:
S? o
I :N N'H
7‘ C
H2N ll
9d 0
H O
(PI 1 O
@ifil
@961:
wherein R is hydrogen or methyl. In a te embodiment, the invention asses the use
of enantiomerically pure forms (e.g. optically pure (R) or (S) enantiomers) of these compounds.
Still other specific immunomodulatory nds belong to a class of isoindole-imides
disclosed in US. patent application nos. 10/032,286 and 09/972,487, and ational
Application No. PCT/U801/50401 (International Publication No. WO 02/059106), each of which
are incorporated herein by reference. In one representative embodiment, said
immunomodulatory compound is a compound having the structure
Y\ NH
N 0
X R2
R1\N )1]
wherein one of X and Y is C=O and the other is CH2 or C=O;
R1 is H, (C1—C3 )alkyl, (C3—C7)cycloalkyl, )alkenyl, (C2-C8)alkynyl, benzyl, aryl,
(C0-C4)alkyl—(C1-C6)heterocycloalkyl, (C0-C4)alkyl—(Cz-C5)heteroaryl, C(O)R3, C(S)R3,
C(O)OR4, (C1—C8)alkyl—N(R6)2, (C1—C8)alky1—OR5, )alkyl—C(O)OR5, C(O)NHR3,
C(S)NHR3, C(O)NR3R3’, C(S)NR3R3’ or (C1—C8)alkyl—O(CO)R5,
R2 is H, F, benzyl, (Cl-Cg)alkyl, (C2-C8)alkenyl, or )alkynyl;
R3 and R3, are independently (C1-C8)alkyl, (C3-C7)cycloalkyl, (C2-C3)alkenyl, (C2-
Cg)a1kyny1, benzyl, aryl, (C0-C4)alkyl—(C1-C6)heterocycloalkyl, (C0-C4)alkyl—(C2-C5)heteroaryl,
(Co-Cg)alkyl—N(R6)2, (Cl-Cg)alkyl—OR5, (Cl—Cg)alkyl—C(O)OR5, (C1—C8)alkyl—O(CO)R5, or
C(O)OR5,
R4 is (C1-C8)alkyl, (C2—Cg)alkenyl, (CZ—Cg)alkynyl, (C1—C4)alkyl—OR5, benzyl, aryl, (C0-
C4)alkyl—(C1-C6)heterocycloalkyl, or (C0-C4)alkyl—(C2-C5)heteroaryl,
R5 is (C1-C8)alkyl, (C2-C8)alkenyl, (C2-C3)alkynyl, benzyl, aryl, or (C2-C5)heteroaryl;
each ence of R6 is independently H, (C1—C8)alkyl, (C2-C8)alkenyl, (C2—C3)alkynyl,
, aryl, )heteroaryl, or (C0-Cg)alkyl—C(O)O—R5 or the R6 groups can join to form a
heterocycloalkyl group;
n is O or 1; and
* represents
a chiral-carbon center;
or a pharmaceutically acceptable salt, hydrate, solvate, clathrate, enantiomer,
diastereomer, racemate, or mixture of stereoisomers thereof.
In specific compounds of the above formula, when n is 0 then R1 is (C3-C7)cycloalkyl,
)alkenyl, (C2-C8)alkynyl, benzyl, aryl, (C0-C4)alkyl—(C1-C6)heterocycloalkyl, (C0-
C4)alkyl-(Cz-C5)heteroaryl, , C(O)OR4, (C1-C8)alkyl—N(R6)2, (C1-C3)a1kyl—OR5, (C1-
Cg)alky1—C(O)OR5, C(S)NHR3, or (C1-C8)alkyl—O(CO)R5;
R2 is H or (C1-C8)alkyl; and
R3 is (C1-C8)alkyl, (C3—C7)cycloalkyl, (C2-C3)alkenyl, (C2-Cg)alkynyl, benzyl, aryl, (C0-
C4)alkyl—(C1—C6)heterocycloalkyl, (C0-C4)alkyl—(C2-C5)heteroaryl, (C5-C8)alkyl—N(R6)2 ; (C0-
Cg)alky1—NH—C(O)O—R5; (Cl—Cg)alkyl—OR5,(C1-C3)alkyl—C(O)OR5, (C1-C8)alkyl—O(CO)R5, or
C(O)OR5; and the other les have the same definitions.
In other specific compounds of the above formula, R2 is H or (C1-C4)alkyl.
In other c compounds of the above formula, R1 is (C1-C8)alkyl or benzyl.
In other specific compounds of the above formula, R1 is H, (C1-C8)alkyl, benzyl,
CH20CH3, CH2CH20CH3, or
“""CHzfl
In another embodiment of the compounds of the above formula, R1 is
R7 R7
n n
m w. W {I
wherein Q is O or S, and each occurrence of R7 is independently H, (Cl-Cg)alkyl, benzyl,
3, or 0CH3.
In other specific compounds of the above formula, R1 is C(O)R3.
In other specific compounds of the above formula, R3 is (C0—C4)alkyl—(Cz—Cs)heteroaryl,
)a1kyl, aryl, or (C0-C4)alkyl—OR5.
In other specific compounds of the above formula, heteroaryl is pyridyl, furyl, or thienyl.
In other c compounds of the above formula, R1 is C(O)OR4.
In other specific compounds of the above formula, the H of C(O) can be
ed with (C1-C4)alkyl, aryl, or benzyl.
In another embodiment, said immunomodulatory compound is a compound having
the structure
0 IR
Y\ N
N o
R3 X R6
wherein:
one ofX and Y is C=O and the other is CH2 or C=O;
R is H or CHzOCOR’;
(i) each of R1, R2, R3, or R4, independently of the others, is halo, alkyl of l to 4 carbon
atoms, or alkoxy of l to 4 carbon atoms or (ii) one of R1, R2, R3, or R4 is nitro or -NHR5 and the
remaining of R1, R2, R3, or R4 are hydrogen;
R5 is hydrogen or alkyl of l to 8 carbons
R6 hydrogen, alkyl of l to 8 carbon atoms, benzo, , or fluoro;
R’ is R7-CHR10-N(R8R9),
R7 is m-phenylene or p-phenylene or -(CnH2n)- in which n has a value of 0 to 4,
each of R8 and R9 taken independently of the other is hydrogen or alkyl of l to 8 carbon
atoms, or R8 and R9 taken together are ethylene, pentamethylene, hexamethylene,
or -CH2CH2X1CH2CH2— in which X1 is -O-, -S—, or -NH—;
R10 is hydrogen, alkyl of to 8 carbon atoms, or phenyl, and
* represents
a chiral-carbon center;
or a pharmaceutically acceptable salt, hydrate, solvate, clathrate, enantiomer,
reomer, racemate, or mixture of stereoisomers thereof.
In a specific embodiment, expansion of the hematopoietic cells is performed in
IMDM supplemented with 20% BITS (bovine serum albumin, recombinant human insulin and
transferrin), SCF, Flt—3 ligand, IL-3, and 4-(Amino)(2,6-dioxo(3-piperidyl))—isoindoline—l,3-
dione (10 pM in 0.05% DMSO). In a more specific embodiment, about 5 X 107 hematopoietic
cells, e.g, CD34+ cells, are expanded in the medium to from about 5 X 1010 cells to about 5 X
1012 cells, which are resuspended in 100 mL of IMDM to produce a population of expanded
hematopoietic cells. The population of ed hematopoietic cells is preferably cryopreserved
to facilitate shipping.
In various specific embodiments, at least 50%, 55%, 60%, 65%, 70%. 75%, 80%,
85%, 90%, 95%, 97%, 98%, or 99% of the hematopoietic cells are entiated to NK cells.
In certain embodiments, the process of expansion and differentiation of the
hematopoietic cells, as bed herein, comprises ining the cell population comprising
said hematopoietic cells at between about 2 x 104 and about 2 x 105 cells per iter during
expansion and differentiation. In certain other embodiments, the process of ion and
differentiation of the hematopoietic cells, as described herein, comprises maintaining the cell
population sing said hematopoietic cells at no more than about 1 x 105 cells per milliliter.
The time for expansion and differentiation of hematopoietic cells into NK cells can
be, for e, from about 3 days to about 120 days. In one embodiment, the differentiation
time is about 7 days to about 75 days. In r embodiment, the differentiation time is about
14 days to about 50 days. In a specific embodiment, the differentiation time is about 21 days to
about 28 days.
.2.7.2. Second Step
The hematopoietic cells, e.g., stem cells or progenitor cells, and l killer cells,
resulting from the first step, are further expanded and differentiated in a second step, e.g,
without the use of feeder layer or in the presence of feeder cells. Culture of the cells as described
herein results in continuous expansion, differentiation as well as maturation of the NK cells from
the first step. In the second step, the NK cells are expanded, differentiated and maturated, in a
continuous fashion, in a second culture medium, e.g, comprising different nes and/or
bioactive molecules than said first medium. In certain embodiments, the second culture medium
is an animal component-free medium. Exemplary animal component-free cell culture media are
described in the disclosure.
Thus, in one aspect, bed herein is a process of producing activated NK cells,
comprising expanding the NK cells from the first step, described above, in a second medium in
the presence of feeder cells and in contact with interleukin-2 (IL-2). In specific embodiments,
said second medium comprises cell growth medium sing IL-2, e.g., 10 IU/mL to 1000
IU/mL, and one or more of: human serum (e.g., human serum AB), fetal bovine serum (PBS) or
fetal calf serum (FCS), e.g., 5%-15% FCS V/v; transferrin, e.g., 10 ug/mL to 50 ug/mL; insulin,
e.g., 5 ug/mL to 20 ug/mL, lamine, e.g., 5 X 10‘4 to 5 X 10‘5 M, oleic acid, e.g., 0.l ug/mL
to 5 ug/mL, linoleic acid, e.g., 0.l ug/mL to 5 ug/mL, palmitic acid, e.g., 0.05 ug/mL to 2
ug/mL; bovine serum albumin (BSA), e.g., l ug/mL to 5 ug/mL, and/or phytohemagglutinin,
e. g., 0.01 ug/mL to 1 ug/mL. In a more specific embodiment, said second medium comprises
cell growth medium comprising PBS or FCS, e.g‘, 10% FCS V/V, IL—2, transferrin, insulin,
ethanolamine, oleic acid, linoleic acid, palmitic acid, bovine serum albumin (BSA) and
phytohemagglutinin. In a more c embodiment, said second medium comprises Iscove’s
Modified Dulbecco’s Medium (IMDM), 10% PBS or FCS, 400 IU IL-2, 35 ug/mL transferrin, 5
ug/mL insulin, 2 X 10‘5 M lamine, 1 ug/mL oleic acid, 1 ug/mL linoleic acid (Sigma-
Aldrich), 0.2 ug/mL palmitic acid (Sigma-Aldrich), 2.5 ug/mL BSA (Sigma—Aldrich) and 0.1
ug/mL phytohemagglutinin.
In certain embodiments, the second medium does not comprise one or more of,
granulocyte colony-stimulating factor (G—CSF), granulocyte/macrophage colony stimulating
factor (GM-CSF), interleukin-6 (IL-6), macrophage inflammatory Protein 1 (X (MIPlOL), or
leukemia inhibitory factor (LIF).
] Feeder cells, when used, can be established from various cell types. Examples of
these cell types include, without limitation, fibroblasts, stem cells (e.g., tissue culture-adherent
placental stem cells), blood cells (e.g., peripheral blood clear cells (PBMC)), and
cancerous cells (e.g, chronic myelogenous leukemia (CML) cells such as K562). In a specific
embodiment, said culturing in said second medium comprises culturing using feeder cells, e.g.,
K562 cells and/or peripheral blood mononuclear cells (PBMCs), e.g., at the time the cells are
started in said second medium, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 days fter. In certain
embodiments, feeder cells are optionally from a different species as the cells they are ting.
For example, human NK cells can be supported by mouse embryonic fibroblasts (from primary
culture or a telomerized line).
In certain embodiments, feeder cells are optionally inactivated by irradiation (e.g., y-
ation) or ent with an anti-mitotic agent such as mitomycin C, to prevent them from
outgrowing the cells they are supporting, but permit synthesis of important factors that support
the NK cells. For example, cells can be irradiated at a dose to inhibit proliferation but permit
synthesis of important factors that support human embryonic stem (hES) cells (about 4000 rads
gamma irradiation).
Culture ofNK cells for the second step can take place in any container compatible
with cell culture and expansion, e.g., flask, tube, beaker, dish, multiwell plate, bag or the like. In
a specific embodiment, feeder cell-dependent culture ofNK cells takes place in a bag, e.g, a
flexible, gas-permeable fluorocarbon e bag (for example, from American Fluoroseal). In a
specific embodiment, the container in which the NK cells are cultured is suitable for shipping,
e. g., to a site such as a hospital or military zone n the expanded NK cells are further
expanded, differentiated and maturated.
Differentiation of the cells from step 1 into activated NK cells can be assessed by
detecting NK cell-specific markers, e.g., by flow cytometry. NK pecific s include,
but are not limited to, CD56, CD94, CD1 17 and NKp46. Differentiation can also be assessed by
the morphological characteristics ofNK cells, e.g., large size, high protein sis activity in
the abundant asmic reticulum (ER), and/or preformed granules.
The time for expansion and differentiation of cells from step 1 into activated NK cells
can be, for example, from about 3 days to about 120 days. In one embodiment, the
entiation time is about 7 days to about 75 days. In another embodiment, the differentiation
time is about 14 days to about 50 days. In a specific embodiment, the differentiation time is
about 10 days to about 21 days.
] Differentiation of hematopoietic cells into NK cells can be assessed by detecting
markers, e.g, CD56, CD94, CD117, NKG2D, DNAM-l and NKp46, by, for example, flow
cytometry. Differentiation can also be assessed by the logical characteristics ofNK cells,
e. g., large size, high protein synthesis activity in the abundant endoplasmic reticulum (ER),
and/or preformed granules. Maturation ofNK cells (e.g., activated NK cells) can be ed by
detecting one or more functionally relevant makers, for example, CD94, CD161, NKp44,
DNAM-l, 2B4, NKp46, CD94, KIR, and the NKG2 family of ting receptors (e.g.,
NKG2D). Maturation ofNK cells (e.g., ted NK cells) can also be assessed by detecting
specific markers during different pmental stages. For example, in one embodiment, pro-
NK cells are CD34+, CD45RA+, CD10+, CD1 17— and/or CDl6l‘. In another embodiment, pre-
NK cells are CD34+, +, CD10_, CD117+, and/or CD161‘. In another embodiment,
immature NK cells are CD34‘, CD117+, CD161+, NKp46‘ and/or CD94/NKG2A‘. In another
embodiment, CD56bright NK cells are CD117+, NKp46+, CD94/NKG2A+, CD16‘, and/or KIR+/_.
In another embodiment, CD56dim NK cells are CD117‘, NKp46+, CD94/NKG2A+/‘, CD16+,
and/or KIR+. In a specific embodiment, maturation ofNK cells (e.g., activated NK cells) is
determined by the percentage ofNK cells (e.g., activated NK cells) that are , CD94+
and/or NKp46+. In a more specific embodiment, at least 10%, 20%, 25%, 30%, 35%, 40%, 50%,
55%, 60%, 65% or 70% of mature NK cells (e.g., activated NK cells) are NKp46+. In another
more specific embodiment, at least 10%, 20%, 25%, 30%, 35%, 40%, 45% or 50% of mature
NK cells (e.g., activated NK cells) are CD94+. In another more specific embodiment, at least
%, 20%, 25%, 30%, 35%, 40%, 45% or 50% of mature NK cells (e.g., activated NK cells) are
CD161_.
] In certain embodiments, the differentiation of hematopoietic cells into NK cells are
assessed by detecting the expression level of, e.g., CD3, CD7 or CD127, CD10, CD14, CD15,
CD16, CD33, CD34, CD56, CD94, CD117, CD161, NKp44, NKp46, NKG2D, DNAM-l, 234
or TO—PRO-3, using, e.g., antibodies to one or more of these cell markers. Such antibodies can
be conjugated to a detectable label, for example, as fluorescent label, e.g, FITC, R—PE, PerCP,
PerCP-Cy5.5, APC, APC-Cy7 or APC-H7.
.2.8. Methods of Producing TSPNK Cells
TSPNK cells may be ed from hematopoietic cells, which are described above.
In certain embodiment, the TSPNK cells are ed from expanded hematopoietic cells, e.g.,
poietic stem cells and/or hematopoietic progenitor cells.
In one embodiment, the TSPNK cells are produced by a three-step process. In certain
ments, the process of expansion and entiation of the hematopoietic cells, as
described herein, to produce NK progenitor cell populations or NK cell populations according to
a three—step s described herein comprises maintaining the cell population comprising said
hematopoietic cells at n about 2 x 104 and about 6 x 106 cells per milliliter, e.g., n
about 2 x 104 and about 2 x 105 cells per milliliter, during expansion and differentiation. In
certain other embodiments, the process of ion and differentiation of the hematopoietic
cells, as described herein, comprises maintaining the cell population comprising said
hematopoietic cells at no more than about 1 x 105 cells per milliliter. In certain other
ments, the process of expansion and differentiation of the hematopoietic cells, as
described herein, comprises maintaining the cell tion comprising said hematopoietic cells
at no more than about 1 X 105 cells per milliliter, 2 X 105 cells per milliliter, 3 X 105 cells per
iter, 4 X 105 cells per milliliter, 5 X 105 cells per milliliter, 6 X 105 cells per milliliter, 7 X 105
cells per milliliter, 8 X 105 cells per milliliter, 9 X 105 cells per milliliter, l X 106 cells per
milliliter, 2 X 106 cells per milliliter, 3 X 106 cells per milliliter, 4 X 106 cells per milliliter, 5 X 106
cells per milliliter, 6 X 106 cells per milliliter, 7 X 106 cells per milliliter, 8 X 106 cells per
iter, or 9 X 106 cells per milliliter.
In a certain embodiment, the three—step process comprises a first step (“step 1”)
comprising culturing poietic stem cells or progenitor cells, e.g., CD34+ stem cells or
progenitor cells, in a first medium for a specified time period, e.g., as described herein. In
certain embodiments, the first medium contains one or more factors that promote expansion of
hematopoietic progenitor cells, one or more factors for initiation of lymphoid differentiation
within the expanding hematopoietic progenitor population, and/or one or more s that mimic
stromal feeder support. In certain ments, the first medium comprises one or more
cytokines (for example, Flt3L, TPO, SCF). In certain embodiments, the first medium comprises
IL-7. In certain embodiments, the first medium comprises sub-ng/mL concentrations of G—CSF,
IL-6 and/or GM-CSF. In a specific embodiment, the first medium comprises the cytokines
Flt3L, TPO, and SCF, IL-7, and sub-ng/mL concentrations of G—CSF, IL-6 and GM-CSF. In
specific ments, in the first , CD34+ cells undergo expansion into lineage specific
progenitors, which then become CD34-. In n embodiments, this expansion occurs y.
In certain embodiments, the CD34- cells se more than 50%, more than 55%, more than
60%, more than 65%, more than 70%, more than 75%, more than 80%, or more of the total
population at the end of step 1. In a more specific embodiment, CD34- cells comprise more than
80% of the total population at the end of step 1.
In certain embodiments, subsequently, in “step 2” said cells are cultured in a second
medium for a specified time period, e.g., as described herein. In certain embodiments, the second
medium contains factors that may promote further expansion of lymphoid progenitors, factors
that may contribute to development along the NK lineage, and/or factors that mimic stromal
feeder support. In n embodiments, the second medium comprises one or more cytokines
(e.g., Flt3L, SCF, IL-15, and/or IL-7). In certain embodiments, the second medium comprises
IL-l7 and/or IL-15. In certain embodiments, the second medium comprises sub-ng/mL
concentrations of G—CSF, IL—6 and/or GM-C SF. In a specific embodiment, the second medium
comprises the cytokines Flt3L, SCF, IL-15, and IL-7, IL-17 and IL-15, and sub-ng/mL
concentrations of G—CSF, 1L-6 and .
In certain embodiments, subsequently, in “step 3” said cells are cultured in a third
medium for a specified time , e.g., as described herein. In certain embodiments, the third
medium comprises factors that promote differentiation and onal activation of CD56+CD3-
CDl6- cells, which may be NK progenitor cells. In one embodiment, such s comprise IL2
and ILlZ and IL18, IL12 and ILlS, IL12 and E18, ILZ and IL12 and ILIS and ILl8, or IL2 and
ILlS and IL18. In certain embodiments, the third medium comprises factors that mimic stromal
feeder t. In certain embodiments, the third medium comprises one or more cytokines
(e.g., SCF, IL-15, IL-7, IL-2). In certain embodiments, the third medium comprises sub-ng/mL
concentrations of G—CSF, 1L-6 and/or GM-C SF. In a specific embodiment, the third medium
comprises the cytokines SCF, IL-15, IL-7, IL—2, and sub-ng/mL concentrations of G—CSF, E-6
and GM-CSF.
In specific embodiments, the three—step s is used to produce NK cell (e.g.,
mature NK cell) populations. In specific embodiments, the three-step process is used to produce
NK progenitor cell populations. In certain embodiments, the step process is conducted in
the absence of stromal feeder cell support. In certain embodiments, the three-step process is
conducted in the absence of exogenously added steroids (e.g, cortisone, hydrocortisone, or
derivatives thereof).
In certain embodiments, the first medium used in the three-step processes described
herein may contain any of the components of the first or second medium described in Section
.2.4 in connection with the two-step method. In certain ments, said first medium used in
the three-step process comprises medium sing one or more of: animal serum, e.g., human
serum (e.g., human serum AB), fetal bovine serum (FBS) or fetal calf serum (FCS), e.g., 1% to
% v/v serum, e.g., 5% to 20% v/v serum; stem cell factor (SCF), e.g, 1 ng/mL to 50 ng/mL
SCF, FMS-like tyrosine kinase-3 ligand (Flt-3 ligand), e.g, 1 ng/ml to 30 ng/mL Flt-3 ligand,
interleukin-7 (IL-7), e.g, 1 ng/mL to 50 ng/mL IL-7; opoietin (TPO), e.g., 1 ng/mL to
100 ng/mL, for example, 1 ng/mL to 50 PO; interleukin-2 (IL-2), e.g., up to 2000
IU/mL, for example, 50 IU/mL to 500 IU/mL; and/or heparin, e.g., low-weight heparin (LWH),
WO 09668
e. g., 0.1 IU/mL to 10 IU/mL heparin. In certain embodiments, said first medium additionally
comprises one or more of the following: antibiotics such as ycin; antioxidants such as
transferrin, insulin, and/or beta-mercaptoethanol, sodium selenite, ascorbic acid; ethanolamine,
and glutathione. In certain embodiments, said first medium additionally comprises OAC. In
certain ments, said first medium additionally ses interleukin-6 (IL-6), leukemia
inhibitory factor (LIF), G—CSF, GM-CSF, and/or MIP-ld. In certain embodiments, said first
medium additionally comprises one or more anti-oxidants, e.g., holo—transferrin, insulin solution,
reduced glutathione, sodium selenite, ethanolamine, ascorbic acid, aptoethanol, O-acetyl-
L-camitine, N—acetylcysteine, (+/-) lipoic acid, nicotinamide, or resveratrol. In certain
embodiments, the medium that provides the base for the first medium is a cell/tissue culture
medium known to those of skill in the art, e.g., a commercially ble cell/tissue culture
medium such as GBGM®, AIM-V®, TM 10, X—vrvoTM 15, OPTMIZER,
STEMSPAN® H3000, O COMPLETETM, DMEM:Ham’s F12 (“F12”) (e.g., 2:1 ratio,
or high glucose or low glucose DMEM), ed DMEM (Gibco), EL08-1D2, MyelocultTM
H5100, IMDM, and/or RPMI-1640, or is a medium that comprises components lly
included in known cell/tissue culture media, such as the components included in GBGM®, AHVI-
V®, X-VIVOTM lO, X-VIVOTM 15, OPTMIZER, STEMSPAN® H3 000, CELLGRO
COMPLETETM, zHam’s F12 (“F12”) (e.g., 2:1 ratio, or high glucose or low glucose
DMEM), Advanced DMEM (Gibco), EL08-1D2, MyelocultTM H5100, IMDM, and/or RPMI-
1640. In a specific embodiment of any of the embodiments herein, the medium is not GBGM®.
In certain embodiments, the second medium used in the three-step processes
described herein may contain any of the components of the first or second medium described in
Section 5.24 in tion with the two-step method. In certain embodiments, said second
medium used in the three-step process comprises medium comprising one or more of: animal
serum, e.g., human serum (e.g., human serum AB), FBS or FCS, e.g., 5% to 20% v/v serum;
SCF, e.g., 1 ng/mL to 50 ng/mL SCF, Flt-3 ligand, e.g., 1 ng/ml to 30 ng/mL Flt-3 ligand, IL-7,
e.g., 1 ng/mL to 50 ng/mL IL-7; interleukin-15 (IL-15), e.g., 1 ng/mL to 50 ng/mL IL-15; and/or
heparin, e.g., LWH, e.g., 0.1 IU/mL to 10 IU/mL heparin. In certain embodiments, said second
medium additionally comprises one or more of the following: otics such as gentamycin;
antioxidants such as transferrin, insulin, and/or beta-mercaptoethanol; sodium selenite, ascorbic
acid, ethanolamine, and glutathione. In certain embodiments, said second medium additionally
comprises OAC. In certain embodiments, said second medium additionally ses
interleukin-6 (IL-6), leukemia inhibitory factor (LIF), G—CSF, GM-CSF, and/or MIP—la. In
certain ments, said second medium additionally comprises one or more xidants,
e. g., ransferrin, insulin solution, d glutathione, sodium selenite, ethanolamine,
ascorbic acid, b-mercaptoethanol, O-acetyl-L-camitine, N—acetylcysteine, (+/-) lipoic acid,
nicotinamide, or resveratrol. In certain embodiments, the medium that provides the base for the
second medium is a cell/tissue culture medium known to those of skill in the art, e.g., a
commercially available cell/tissue culture medium such as GBGM®, AH\/I-V®, X-VIVOTM 10,
X-VIVOTM 15, OPTMIZER, STEMSPAN® H3000, CELLGRO COMPLETETM, DMEM:Ham’s
F12 (“F 12”) (e.g., 2:] ratio, or high glucose or low glucose DMEM), Advanced DMEM (Gibco),
EL08-1D2, ultTM H5100, IMDM, and/or RPMI-1640; or is a medium that comprises
components generally included in known cell/tissue culture media, such as the components
included in GBGM®, AIM-V®, TM 10, X-VIVOTM 15, ER, STEMSPAN®
H3000, CELLGRO COMPLETETM, DMEM:Ham’s F12 (“F12”) (e.g., 2:1 ratio, or high glucose
or low glucose DMEM), Advanced DMEM (Gibco), EL08-1D2, MyelocultTM H5100, IMDM,
and/or RPMI—l640. In a specific embodiment of any of the embodiments herein, the medium is
not GBGM®.
In certain embodiments, the third medium used in the three-step processes described
herein may contain any of the components of the first or second medium described in n
.2.4 in connection with the two-step method. In certain embodiments, said third medium used
in the three-step process comprises medium comprising one or more of: animal serum, e.g.,
human serum (e.g., human serum AB), FBS or FCS, e.g., 5% to 20% v/v serum, SCF, e.g., 1
ng/mL to 50 ng/mL SCF, Flt—3 ligand, e.g., 1 ng/ml to 30 ng/mL Flt—3 ligand, IL-7, e.g., 1 ng/mL
to 50 ng/mL IL-7, IL—15, e.g., 1 ng/mL to 50 ng/mL IL-15, and interleukin-2 (IL-2), e.g., in the
range from 0 to 2000 IU/mL, for example, 50 IU/mL to 1000 IU/mL 1L-2. In certain
embodiments, said third medium additionally comprises one or more of the following: antibiotics
such as gentamycin; antioxidants such as transferrin, insulin, and/or beta-mercaptoethanol;
sodium selenite, ascorbic acid, ethanolamine; and hione. In certain embodiments, said
third medium additionally comprises OAC. In n embodiments, said third medium
additionally comprises interleukin-6 (IL-6), leukemia inhibitory factor (LIF), G—CSF, GM-CSF,
and/or MIP-loc. In certain ments, said third medium additionally comprises one or more
anti-oxidants, e.g., ransferrin, insulin solution, reduced glutathione, sodium selenite,
ethanolamine, ascorbic acid, aptoethanol, O-acetyl-L—carnitine, N—acetylcysteine, (+/—)
lipoic acid, nicotinamide, or resveratrol. In certain embodiments, the medium that provides the
base for the third medium is a cell/tissue e medium known to those of skill in the art, e.g., a
commercially available cell/tissue culture medium such as GBGM®, AH\/I-V®, X-VIVOTM 10,
X-VIVOTM 15, OPTMIZER, STEMSPAN® H3000, CELLGRO COMPLETETM, DMEM:Ham’s
F12 (“F12”) (e.g., 2:1 ratio, or high glucose or low e DMEM), Advanced DMEM (Gibco),
ELO8-1D2, MyelocultTM H5100, lMDM, and/or RPMI-l640; or is a medium that comprises
components generally included in known cell/tissue culture media, such as the components
included in GBGM®, AlM-V®, TM 10, x—vrvoTM 15, OPTMIZER, STEMSPAN®
H3000, CELLGRO COMPLETETM, DMEM:Ham’s F12 ) (e.g., 2:1 ratio, or high glucose
or low glucose DMEM), Advanced DMEM (Gibco), ELO8-1D2, MyelocultTM H5100, HVIDM,
and/or RPMI-l640. In a specific embodiment of any of the embodiments herein, the medium is
not GBGM®,
In certain embodiments, in the three-step processes described herein, said
poietic stem or progenitor cells are cultured in said first medium for l, 2, 3, 4, 5, 6, 7, 8,
9, 10, ll, l2, l3, 14, 15, 16, 17, 18, 19, or 20 days before said culturing in said second medium.
In certain embodiments, cells cultured in said first medium are cultured in said second medium
for 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,11, 12,13, 14,15, 16, 17, 18, 19, or 20 days before said culturing
in said third medium. In certain embodiments, cells cultured in said first medium and said
second medium are ed in said third medium for l, 2, 3, 4, 5, 6, 7, 8, 9, 10, ll, l2, l3, 14,
, 16, 17, 18, 19, 20,21, 22,23, 24,25, 26, 27, 28, 29, or 30 days, or for more than 30 days.
In n embodiments, in the three-step processes described herein, said
poietic stem or progenitor cells are cultured in said first medium for 2-12 days, 3-11 days,
for example, 3-5, 4-6, 5-7, 6-8, 7-9, 8-10, or 9-11 days, before said culturing in said second
medium. In certain embodiments, cells cultured in said first medium are cultured in said second
medium for 1-10 days, for example, 1-3, 2-4, 3-5, 4-6, 5-7, 6-8, or 7-9 days, before said culturing
in said third medium. In n embodiments, cells cultured in said first medium and said
second medium are cultured in said third medium for 2-27 days, for example, 3-25 days, e.g., for
3-5,4-6,5-7,6-8,7-9,8-10,9-11,10-12,11-13,12-14,13-15,14-16,15-17,16-18,17-19,18-
, 19—21, 20—22, 21—23, 22—24, or 23—25 days.
In a specific embodiment, in the three-step processes described herein, said
hematopoietic stem or progenitor cells are cultured in said first medium for 9 days before said
culturing in said second medium; cultured in said second medium for 5 days before said
culturing in said third medium; and cultured in said third medium for 7 days, i.e., the cells are
cultured a total of 21 days.
In a specific embodiment, in the three-step processes described herein, said
hematopoietic stem or progenitor cells are cultured in said first medium for 7-9 days before said
culturing in said second medium; cultured in said second medium for 5-7 days before said
culturing in said third medium; and cultured in said third medium for 21-35 days, i.e., the cells
are cultured a total of 35 days. In a more specific embodiment, in the three-step processes
bed herein, said hematopoietic stem or progenitor cells are ed in said first medium
for 9 days before said culturing in said second medium; cultured in said second medium for 5
days before said culturing in said third medium; and cultured in said third medium for 21 days,
1'. e., the cells are cultured a total of 35 days.
.2.9. Methods of Producing Three-Stage NK Cells
Production ofNK cells and NK cell populations by the three-stage method comprises
expanding a population of hematopoietic cells. During cell ion, a ity of
poietic cells within the hematopoietic cell population differentiate into NK cells. In one
aspect, provided herein is a method of producing NK cells comprising culturing hematopoietic
stem cells or itor cells, e.g., CD34+ stem cells or progenitor cells, in a first medium
comprising a stem cell mobilizing agent and thrombopoietin (Tpo) to produce a first population
of cells, subsequently culturing said first population of cells in a second medium comprising a
stem cell mobilizing agent and interleukin-15 (IL-15), and lacking Tpo, to produce a second
tion of cells, and subsequently culturing said second tion of cells in a third medium
comprising IL-2 and IL-15, and lacking a stem cell zing agent and LMWH, to produce a
third population of cells, wherein the third population of cells comprises natural killer cells that
are CD56+, CD3-, and wherein at least 70%, for example 80%, of the natural killer cells are
Viable with certain ments, such natural killer cells se natural killer cells that are
CD16—. In certain embodiments, such l killer cells comprise natural killer cells that are
CD94—.
In one embodiment, provided herein is a three-stage method of producing NK cell
populations. In certain embodiments, the method of ion and differentiation of the
hematopoietic cells, as described , to produce NK cell populations according to a three—
stage method described herein comprises maintaining the cell population comprising said
hematopoietic cells at between about 2 X 104 and about 6 X 106 cells per milliliter. In certain
aspects, said hematopoietic stem or progenitor cells are initially inoculated into said first medium
from 1 X 104 to 1 X 105 mL. In a specific aspect, said hematopoietic stem or progenitor
cells are initially inoculated into said first medium at about 3 X 104 mL.
In certain embodiments, said hematopoietic stem or progenitor cells are mammalian
cells. In specific embodiments, said hematopoietic stem or progenitor cells are human cells. In
specific embodiments, said poietic stem or progenitor cells are primate cells. In c
embodiments, said hematopoietic stem or progenitor cells are canine cells. In specific
embodiments, said hematopoietic stem or progenitor cells are rodent cells.
In certain aspects, said first population of cells are initially inoculated into said
second medium from 5 X 104 to 5 X 105 mL. In a specific aspect, said first tion of
cells is initially inoculated into said second medium at about 1 X 105 cells/mL.
In certain aspects said second population of cells is initially inoculated into said third
medium from 1 X 105 to 5 X 106 mL. In n s, said second population of cells is
initially inoculated into said third medium from 1 X 105 to 1 X 106 cells/mL. In a specific aspect,
said second population of cells is initially inoculated into said third medium at about 5 X 105
cells/mL. In a more specific aspect, said second tion of cells is initially inoculated into
said third medium at about 5 X 105 cells/mL in a spinner flask. In a specific aspect, said second
population of cells is initially inoculated into said third medium at about 3 X 105 cells/mL. In a
more specific aspect, said second population of cells is initially inoculated into said third
medium at about 3 X 105 cells/mL in a static culture.
In a certain embodiment, the three-stage method comprises a first stage (“stage 1”)
comprising culturing hematopoietic stem cells or progenitor cells, e.g, CD34+ stem cells or
progenitor cells, in a first medium for a specified time period, e.g., as described herein, to
produce a first population of cells. In certain embodiments, the first medium comprises a stem
cell mobilizing agent and thrombopoietin (Tpo). In n embodiments, the first medium
ses in addition to a stem cell mobilizing agent and Tpo, one or more of LMWH, Flt-3L,
SCF, IL-6, IL-7, G—CSF, and GM-CSF.
In a specific embodiment, the first medium comprises
each of the first medium ses in on to a stem cell mobilizing agent and Tpo, each of
LMWH, Flt-3L, SCF, IL-6, IL—7, G-CSF, and GM-CSF.
In certain embodiments, subsequently, in “stage 2” said cells are cultured in a second
medium for a specified time period, e.g., as bed herein, to produce a second population of
cells. In certain embodiments, the second medium ses a stem cell mobilizing agent and
interleukin-15 (IL-15), and lacks Tpo. In certain embodiments, the second medium comprises,
in on to a stem cell mobilizing agent and IL-15, one or more of LMWH, Flt-3, SCF, IL-6,
IL-7, G—CSF, and GM-CSF. In certain embodiments, the second medium ses, in addition
to a stem cell mobilizing agent and IL—15, each of LMWH, Flt-3, SCF, IL-6, IL-7, G—CSF, and
GM-CSF.
In n embodiments, subsequently, in “stage 3” said cells are cultured in a third
medium for a specified time period, e. g., as described herein, to produce a third tion of
cell, e.g., natural killer cells. In certain embodiments, the third medium comprises IL-2 and IL-
, and lacks a stem cell mobilizing agent and LMWH. In certain embodiments, the third
medium comprises in addition to IL-2 and IL-15, one or more of SCF, IL-6, IL-7, G—CSF, and
GM-CSF. In certain embodiments, the third medium comprises in addition to IL-2 and IL-15,
each of SCF, IL-6, IL-7, G—CSF, and GM-CSF.
In a specific embodiment, the three-stage method is used to produce NK cell
tions. In certain embodiments, the three-stage method is conducted in the absence of
l feeder cell support. In certain embodiments, the three-stage method is conducted in the
absence of exogenously added steroids (e.g., cortisone, hydrocortisone, or derivatives thereof).
In certain aspects, said first medium used in the three-stage method comprises a stem
cell mobilizing agent and thrombopoietin (Tpo). In certain aspects, the first medium used in the
three-stage method comprises, in addition to a stem cell mobilizing agent and Tpo, one or more
of Low Molecular Weight Heparin (LMWH), Flt-3 Ligand L), stem cell factor (SCF), IL-6,
IL-7, granulocyte colony-stimulating factor (G—CSF), or granulocyte—macrophage-stimulating
factor (GM-CSF). In certain aspects, the first medium used in the three-stage method comprises,
in addition to a stem cell mobilizing agent and Tpo, each of LMWH, Flt-3L, SCF, IL-6, IL-7, G-
CSF, and GM-CSF. In certain aspects, said Tpo is present in the first medium at a concentration
of from 1 ng/mL to 100 ng/mL, from 1 ng/mL to 50 ng/mL, from 20 ng/mL to 30 ng/mL, or
about 25 ng/mL. In n aspects, in the first medium, the LMWH is present at a concentration
of from 1U/mL to lOU/mL, the Flt-3L is present at a concentration of from 1 ng/mL to 50
ng/mL; the SCF is t at a concentration of from 1 ng/mL to 50 ng/mL; the IL-6 is present at
a concentration of from 0.01 ng/mL to 0.1 ng/mL, the IL-7 is t at a concentration of from 1
ng/mL to 50 ng/mL; the G—CSF is present at a concentration of from 0.01 ng/mL to 0.50 ng/mL;
and the GM-CSF is t at a concentration of from 0.005 ng/mL to 0.1 ng/mL. In certain
aspects, in the first medium, the LMWH is present at a concentration of from 4U/mL to 5U/mL,
the Flt—3L is present at a concentration of from 20 ng/mL to 30 ng/mL; the SCF is present at a
concentration of from 20 ng/mL to 30 ng/mL; the IL-6 is present at a concentration of from 0.04
ng/mL to 0.06 ng/mL; the IL—7 is present at a concentration of from 20 ng/mL to 30 ng/mL; the
G—CSF is present at a concentration of from 0.20 ng/mL to 0.30 ng/mL, and the GM-CSF is
present at a concentration of from 0.005 ng/mL to 0.5 ng/mL. In certain aspects, in the first
medium, the LMWH is t at a concentration of about 4.5U/mL; the Flt-3L is present at a
concentration of about 25 ng/mL, the SCF is present at a concentration of about 27 ng/mL; the
IL-6 is present at a concentration of about 0.05 ng/mL, the IL-7 is present at a concentration of
about 25 ng/mL, the G—C SF is present at a tration of about .25 ng/mL; and the GM-CSF is
present at a concentration of about 0.01 ng/mL. In certain embodiments, said first medium
additionally comprises one or more of the following: antibiotics such as gentamycin;
antioxidants such as transferrin, insulin, and/or ercaptoethanol; sodium selenite, ascorbic
acid, ethanolamine, and glutathione. In certain embodiments, the medium that es the base
for the first medium is a cell/tissue culture medium known to those of skill in the art, e.g., a
cially available cell/tissue culture medium such as , STEMMACSTM, GBGM®,
AIM-V®, TM 10, X—vrvoTM 15, OPTMIZER, STEMSPAN® H3 000, CELLGRO
COMPLETETM, DMEMzHam’s F12 (“F12”) (e.g., 2:1 ratio, or high glucose or low glucose
DMEM), Advanced DMEM (Gibco), EL08-1D2, MyelocultTM H5100, IMDM, and/or RPMI-
1640; or is a medium that comprises components generally included in known cell/tissue e
media, such as the components included in GBGM®, AIM-V®, X-VIVOTM 10, X-VIVOTM 15,
OPTMIZER, STEMSPAN® H3000, O COMPLETETM, DMEM:Ham’s F12 (“Fl2”)
(e.g., 2:1 ratio, or high glucose or low glucose DMEM), Advanced DMEM (Gibco), EL08-1D2,
MyelocultTM H5100, IMDM, and/or RPMI—l640. In a specific embodiment of any of the
embodiments herein, the medium is not GBGM®
In certain aspects, said second medium used in the three-stage method comprises a
stem cell mobilizing agent and interleukin-15 (IL-15), and lacks Tpo. In certain aspects, the
second medium used in the three-stage method comprises, in on to a stem cell mobilizing
agent and IL-15, one or more of LMWH, Flt—3, SCF, IL-6, IL-7, G—CSF, and GM-CSF. In
certain aspects, the second medium used in the three-stage method comprises, in addition to a
stem cell mobilizing agent and IL-15, each of LMWH, Flt-3, SCF, IL-6, IL-7, G—CSF, and GM-
CSF. In certain aspects, said lL-15 is present in said second medium at a concentration of from 1
ng/mL to 50 ng/mL, from 10 ng/mL to 30 ng/mL, or about 20 ng/mL. In certain aspects, in said
second medium, the LMWH is present at a concentration of from lU/mL to lOU/mL, the Flt-3L
is present at a concentration of from 1 ng/mL to 50 ng/mL; the SCF is present at a concentration
of from 1 ng/mL to 50 ng/mL, the IL-6 is present at a concentration of from 0.01 ng/mL to 0.1
ng/mL; the IL—7 is present at a concentration of from 1 ng/mL to 50 ng/mL; the G—CSF is t
at a concentration of from 0.01 ng/mL to 0.50 ng/mL, and the GM-C SF is t at a
concentration of from 0.005 ng/mL to 0.1 ng/mL. In certain aspects, in the second medium, the
LMWH is present in the second medium at a concentration of from 4U/mL to 5U/mL, the Flt-3L
is present at a concentration of from 20 ng/mL to 30 ng/mL; the SCF is present at a concentration
of from 20 ng/mL to 30 ng/mL; the IL—6 is present at a concentration of from 0.04 ng/mL to 0.06
ng/mL, the IL-7 is present at a concentration of from 20 ng/mL to 30 ng/mL, the G—CSF is
present at a concentration of from 0.20 ng/mL to 0.30 ng/mL; and the GM-C SF is present at a
tration of from 0.005 ng/mL to 0.5 ng/mL. In certain aspects, in the second medium, the
LMWH is present in the second medium at a concentration of from 4U/mL to 5U/mL; the Flt-3L
is present at a concentration of from 20 ng/mL to 30 ng/mL, the SCF is present at a concentration
of from 20 ng/mL to 30 ng/mL, the IL-6 is t at a concentration of from 0.04 ng/mL to 0.06
ng/mL; the IL—7 is t at a concentration of from 20 ng/mL to 30 ng/mL; the G—CSF is
present at a concentration of from 0.20 ng/mL to 0.30 ng/mL; and the GM-C SF is present at a
concentration of from 0.005 ng/mL to 0.5 ng/mL. In certain aspects, in the second medium, the
LMWH is present in the second medium at a concentration of about L, the Flt-3L is
present at a concentration of about 25 ng/mL; the SCF is present at a concentration of about 27
ng/mL; the IL—6 is present at a concentration of about 0.05 ng/mL, the IL-7 is t at a
concentration of about 25 ng/mL, the G—CSF is present at a concentration of about 0.25 ng/mL,
and the GM-CSF is t at a concentration of about 0.01 ng/mL. In certain embodiments,
said second medium additionally comprises one or more of the following: antibiotics such as
gentamycin, antioxidants such as transferrin, insulin, and/or beta-mercaptoethanol; sodium
selenite; ascorbic acid; ethanolamine; and glutathione. In certain embodiments, the medium that
provides the base for the second medium is a cell/tissue culture medium known to those of skill
in the art, e.g., a commercially ble cell/tissue e medium such as SCGMTM,
STEMMACSTM, GBGM®, , X-VIVOTM 10, X—vrvoTM 15, OPTMIZER,
STEMSPAN® H3000, CELLGRO COMPLETETM, DMEM:Ham’s F12 ) (e.g., 2:1 ratio,
or high glucose or low glucose DMEM), Advanced DMEM (Gibco), EL08-1D2, MyelocultTM
H5100, IMDM, and/or RPMI-1640; or is a medium that comprises components generally
included in known issue culture media, such as the components included in GBGM®, AIM-
V®, X-VIVOTM 10, X-VIVOTM 15, ER, STEMSPAN® H3000, CELLGRO
TETM, am’s F12 (“F12”) (e.g., 2:1 ratio, or high glucose or low glucose
DMEM), Advanced DMEM (Gibco), EL08-1D2, MyelocultTM H5100, IMDM, and/or RPMI-
1640. In a specific embodiment of any of the embodiments herein, the medium is not GBGM®.
In certain embodiments, the third medium used in the three-stage method comprises
medium comprising In certain aspects, said third medium used in the three-stage method
comprises IL-2 and IL—15, and lacks a stem cell mobilizing agent and LMWH. In certain
aspects, the third medium used in the three-stage method comprises, in addition to IL-2 and IL-
, one or more of SCF, IL-6, IL-7, G—CSF, or GM-CSF. In certain aspects, the third medium
used in the three-stage method comprises, in addition to IL-2 and 1L-15, each of SCF, IL-6, IL-7,
G—CSF, and GM-CSF. In certain aspects, said IL-2 is present in said third medium at a
concentration of from 10 U/mL to 10,000 U/mL and said 1L—15 is present in said third medium at
a concentration of from 1 ng/mL to 50 ng/mL. In certain aspects, said 1L-2 is t in said
third medium at a concentration of from 100 U/mL to 10,000 U/mL and said IL-lS is present in
said third medium at a concentration of from 1 ng/mL to 50 ng/mL. In n aspects, said IL-2
is present in said third medium at a tration of from 300 U/mL to 3,000 U/mL and said IL-
is present in said third medium at a concentration of from 10 ng/mL to 30 ng/mL. In certain
aspects, said IL-2 is present in said third medium at a concentration of about 1,000 U/mL and
said IL-15 is present in said third medium at a concentration of about 20 ng/mL. In certain
s, in said third medium, the SCF is present at a concentration of from 1 ng/mL to 50
ng/mL; the IL—6 is present at a concentration of from 0.01 ng/mL to 0.1 ng/mL; the 1L-7 is
present at a concentration of from 1 ng/mL to 50 ng/mL, the G—C SF is present at a concentration
of from 0.01 ng/mL to 0.50 ng/mL; and the GM-C SF is present at a concentration of from 0.005
ng/mL to 0.1 ng/mL. In certain aspects, in said third medium, the SCF is present at a
concentration of from 20 ng/mL to 30 ng/mL; the IL-6 is present at a concentration of from 0.04
ng/mL to 0.06 ng/mL; the IL-7 is present at a concentration of from 20 ng/mL to 30 ng/mL; the
G—CSF is present at a concentration of from 0.20 ng/mL to 0.30 ng/mL; and the GM-CSF is
present at a concentration of from 0.005 ng/mL to 0.5 ng/mL. In certain aspects, in said third
medium, the SCF is present at a concentration of about 22 ng/mL, the IL-6 is present at a
concentration of about 0.05 ng/mL; the IL-7 is present at a concentration of about 20 ng/mL; the
G—CSF is present at a concentration of about 0.25 ng/mL, and the GM—CSF is present at a
concentration of about 0.01 ng/mL. In certain ments, said third medium additionally
comprises one or more of the following: antibiotics such as gentamycin; antioxidants such as
errin, insulin, and/or beta-mercaptoethanol; sodium selenite; ascorbic acid; ethanolamine;
and glutathione. In certain embodiments, the medium that provides the base for the third
medium is a cell/tissue culture medium known to those of skill in the art, e.g., a commercially
ble cell/tissue e medium such as SCGMTM, STEMMACSTM, GBGM®, AIM-V®, X-
v1voTM 10, X—VIvoTM 15, OPTMIZER, STEMSPAN® H3000, CELLGRO COMPLETETM,
DMEM:Ham’s F12 (“F12”) (e.g., 2:1 ratio, or high glucose or low glucose DMEM), Advanced
DMEM ), EL08-1D2, MyelocultTM H5100, IlVIDM, and/or RPMI-1640; or is a medium
that comprises components generally included in known issue culture media, such as the
components included in GBGM®, AIM-V®, X—VIVOTM 10, X—VIVOTM 15, ER,
STEMSPAN® H3000, CELLGRO COMPLETETM, DMEM1Ham’s F12 (“F12”) (e.g., 2:1 ratio,
or high glucose or low glucose DMEM), Advanced DIVIEM (Gibco), EL08-1D2, MyelocultTM
H5100, IMDM, and/or RPMI—1640. In a specific ment of any of the embodiments herein
the medium is not GBGM®
Generally, the particularly recited medium components do not refer to possible
tuents in an undefined component of said medium. For example, said Tpo, IL-2, and IL-15
are not comprised within an undefined component of the first medium, second medium or third
, e.g., said Tpo, IL-2, and IL-15 are not comprised within serum. Further, said LMWH,
Flt-3, SCF, IL-6, IL-7, G—CSF, and/or GM-C SF are not comprised within an undefined
component of the first , second medium or third medium, e.g, said LMWH, Flt-3, SCF,
IL-6, IL-7, G—C SF, and/or GM-CSF are not comprised within serum.
In certain aspects, said first medium, second medium or third medium ses
human serum—AB. In certain aspects, any of said first medium, second medium or third medium
comprises 1% to 20% human serum-AB, 5% to 15% human serum-AB, or about 2, 5, or 10%
human serum-AB.
In certain embodiments, in the three-stage methods described herein, said
poietic stem or progenitor cells are cultured in said first medium for 1, 2, 3, 4, 5, 6, 7, 8,
9, 10, ll, 12, l3, 14, 15, 16, 17, 18, 19, or 20 days, In certain ments, in the three-stage
methods bed herein, cells are cultured in said second medium for l, 2, 3, 4, 5, 6, 7, 8, 9, 10,
11, 12, l3, 14, 15, l6, 17, 18, 19, or 20 days. In certain embodiments, in the three-stage methods
described herein, cells are cultured in said third medium for l, 2, 3, 4, 5, 6, 7, 8, 9, 10, ll, l2, 13,
14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 days, or for more than 30 days.
In a specific embodiment, in the three-stage methods described , said
hematopoietic stem or progenitor cells are cultured in said first medium for 7-13 days to produce
a first population of cells, before said culturing in said second medium, said first population of
cells are ed in said second medium for 2-6 days to produce a second population of cells
before said culturing in said third medium; and said second population of cells are cultured in
said third medium for 10-30 days, 1'.e., the cells are cultured a total of 19-49 days.
In a specific embodiment, in the three-stage methods described herein, in the three-
stage methods bed herein, said hematopoietic stem or progenitor cells are cultured in said
first medium for 8-12 days to produce a first population of cells, before said culturing in said
second medium, said first population of cells are cultured in said second medium for 3-5 days to
produce a second tion of cells before said culturing in said third ; and said second
population of cells are cultured in said third medium for 15-25 days, i.e., the cells are cultured a
total of 26-42 days.
In a specific embodiment, in the three-stage methods described , said
hematopoietic stem or progenitor cells are cultured in said first medium for about 10 days to
e a first population of cells, before said culturing in said second medium; said first
population of cells are cultured in said second medium for about 4 days to produce a second
population of cells before said culturing in said third medium; and said second population of
cells are cultured in said third medium for about 21 days, 1'. e., the cells are cultured a total of
about 35 days.
2015/068069
In certain aspects, said culturing in said first medium, second medium and third
medium are all performed under static culture conditions, e.g., in a culture dish or culture flask.
In certain aspects, said culturing in at least one of said first medium, second medium or third
medium are med in a spinner flask. In certain aspects, said culturing in said first medium
and said second medium is performed under static culture conditions, and said culturing in said
third medium is performed in a spinner flask.
In n aspects, said culturing is performed in a r flask. In other aspects, said
culturing is med in a G—ReX device. In yet other aspects, said culturing is performed in a
WAVE bioreactor.
In certain aspects, said hematopoietic stem or progenitor cells are initially
inoculated into said first medium from 1 X 104 to l X 105 cells/mL. In a specific aspect, said
hematopoietic stem or progenitor cells are initially inoculated into said first medium at about 3 X
104 cells/mL.
In certain aspects, said first population of cells are initially inoculated into said
second medium from 5 X 104 to 5 X 105 cells/mL. In a specific aspect, said first tion of
cells is initially ated into said second medium at about 1 X 105 cells/mL.
In certain aspects said second population of cells is initially ated into said
third medium from 1 X 105 to 5 X 106 cells/mL. In certain aspects, said second population of
cells is initially inoculated into said third medium from 1 X 105 to l X 106 cells/mL. In a specific
, said second population of cells is initially inoculated into said third medium at about 5 X
105 cells/mL. In a more specific aspect, said second population of cells is lly inoculated into
said third medium at about 5 X 105 cells/mL in a spinner flask. In a c aspect, said second
population of cells is initially inoculated into said third medium at about 3 X 105 cells/mL. In a
more specific aspect, said second population of cells is initially inoculated into said third
medium at about 3 X 105 cells/mL in a static culture.
.2.10. Isolation of Cells
Methods of isolating l killer cells are known in the art and can be used to isolate
the natural killer cells, e.g., activated NK cells or TSPNK cells (e.g., NK progenitor cells)
produced using the three-step process, described herein. NK cells can be isolated or enriched by
staining cells from a tissue source, e.g, peripheral blood, with dies to CD56 and CD3, and
selecting for CD56+CD3_ cells. NK cells, e.g., activated NK cells or TSPNK cells, can be
isolated using a commercially available kit, for example, the NK Cell Isolation Kit nyi
Biotec). NK cells, e.g., activated NK cells or TSPNK cells, can also be isolated or enriched by
removal of cells other than NK cells in a tion of cells that comprise the NK cells, e.g.,
activated NK cells or TSPNK cells. For example, NK cells, e.g., activated NK cells or TSPNK
cells, may be ed or enriched by depletion of cells displaying non-NK cell markers using,
e. g., antibodies to one or more of CD3, CD4, CD14, CD19, CD20, CD36, CD66b, CD123, HLA
DR and/or CD23 5a phorin A). Negative isolation can be carried out using a commercially
available kit, e. g., the NK Cell Negative Isolation Kit (Dynal h). Cells isolated by these
methods may be additionally sorted, e.g., to separate CD16“ and CD16‘ cells.
Cell separation can be accomplished by, e.g., flow cytometry, cence-activated
cell sorting (FACS), or, preferably, ic cell sorting using microbeads conjugated with
specific antibodies. The cells may be isolated, e.g, using a magnetic activated cell g
(MACS) technique, a method for separating particles based on their y to bind magnetic
beads (e.g., about 05—100 um diameter) that comprise one or more specific antibodies, e.g, anti-
CD56 antibodies. Magnetic cell tion can be performed and automated using, e.g., an
AUTOMACSTM Separator (Miltenyi). A variety of useful modifications can be performed on
the magnetic microspheres, including covalent addition of antibody that specifically izes a
particular cell e molecule or hapten. The beads are then mixed with the cells to allow
g. Cells are then passed through a magnetic field to separate out cells having the specific
cell surface marker. In one embodiment, these cells can then isolated and re—mixed with
magnetic beads coupled to an antibody against additional cell surface markers. The cells are
again passed through a magnetic field, isolating cells that bound both the antibodies. Such cells
can then be diluted into separate dishes, such as microtiter dishes for clonal isolation.
In some embodiments, the purity of the isolated or enriched natural killer cells can be
confirmed by detecting one or more of CD56, CD3 and CD16.
.2.11. Preservation of Cells/Perfusate
Cells, e. g., NK cells produced using the methods described herein, e.g., activated NK
cells or TSPNK cells (e.g., NK progenitor cells) produced using the three-step process described
herein, or placental ate cells comprising hematopoietic stem cells or progenitor cells, or
placental perfusate, can be preserved, that is, placed under conditions that allow for long-term
storage, or under conditions that inhibit cell death by, e.g., apoptosis or necrosis.
Placental ate can be produced by e of a cell collection composition
through at least a part of the placenta, e.g., through the placental vasculature. The cell collection
composition comprises one or more compounds that act to preserve cells contained within the
perfusate. Such a placental cell tion composition can se an apoptosis inhibitor,
necrosis inhibitor and/or an oxygen-carrying perfluorocarbon, as described in related US.
ation Publication No. 20070190042, the disclosure of which is hereby incorporated by
reference in its ty.
In one embodiment, perfusate or a population of placental cells are collected from a
ian, e.g, human, post—partum placenta by bringing the perfusate or population of cells
into proximity with a cell collection composition comprising an inhibitor of apoptosis and an
oxygen-carrying perfluorocarbon, n said inhibitor of apoptosis is present in an amount and
for a time sufficient to reduce or prevent apoptosis in the tion of placental cells, e.g.,
adherent placental cells, for example, placental stem cells or placental multipotent cells, as
compared to a population of cells not contacted or brought into proximity with the inhibitor of
apoptosis. For example, the placenta can be perfused with the cell collection composition, and
placental cells, e.g, total nucleated tal cells, are isolated therefrom. In a specific
ment, the tor of apoptosis is a caspase inhibitor. In another specific embodiment,
said inhibitor of apoptosis is a INK inhibitor. In a more c embodiment, said INK inhibitor
does not modulate differentiation or proliferation of adherent placental cells, e.g., adherent
placental stem cells or adherent placental multipotent cells. In another embodiment, the cell
collection ition comprises said inhibitor of apoptosis and said oxygen-carrying
perfluorocarbon in separate phases. In another embodiment, the cell collection composition
comprises said inhibitor of apoptosis and said oxygen—carrying perfluorocarbon in an emulsion.
In another embodiment, the cell collection composition additionally comprises an emulsifier,
e. g., lecithin. In another embodiment, said apoptosis inhibitor and said perfluorocarbon are
between about 0 °C and about 25 °C at the time of bringing the placental cells into proximity
with the cell collection composition. In another more specific embodiment, said sis
inhibitor and said perfluorocarbon are between about 2 °C and 10 °C, or between about 2 °C and
about 5 °C, at the time of ng the tal cells into proximity with the cell collection
composition. In another more specific embodiment, said bringing into proximity is performed
during transport of said population of cells. In another more specific embodiment, said bringing
into proximity is performed during ng and thawing of said population of cells.
In another embodiment, placental perfusate and/or tal cells can be collected and
preserved by bringing the perfusate and/or cells into proximity with an inhibitor of apoptosis and
an organ-preserving compound, wherein said inhibitor of apoptosis is t in an amount and
for a time sufficient to reduce or prevent apoptosis of the cells, as compared to perfusate or
placental cells not contacted or brought into proximity with the inhibitor of apoptosis. In a
specific ment, the organ-preserving compound is UW solution (described in US. Patent
No. 4,798,824; also known as VIASPANTM; see also Southard el al., Transplantation 49(2):251-
257 (1990) or a solution described in Stern er al., US. Patent No. 5,552,267, the disclosures of
which are hereby incorporated by reference in their entireties. In r embodiment, said
organ-preserving composition is hydroxyethyl starch, lactobionic acid, raffinose, or a
combination thereof. In another embodiment, the placental cell collection composition
additionally comprises an oxygen-carrying perfluorocarbon, either in two phases or as an
emulsion.
In another ment, placental cells are brought into proximity with a cell
collection composition comprising an apoptosis inhibitor and oxygen—carrying perfluorocarbon,
organ-preserving compound, or combination thereof, during perfusion. In another embodiment,
placental cells are brought into ity with said cell collection compound after collection by
perfusion.
[003 02] Typically, during placental cell collection, enrichment and isolation, it is preferable to
minimize or eliminate cell stress due to hypoxia and mechanical . In r embodiment
of the method, therefore, placental ate or a tion of placental cells is exposed to a
hypoxic condition during collection, enrichment or isolation for less than six hours during said
preservation, wherein a hypoxic condition is a concentration of oxygen that is less than normal
blood oxygen tration. In a more specific embodiment, said perfusate or population of
placental cells is d to said hypoxic condition for less than two hours during said
preservation. In another more c embodiment, said population of tal cells is exposed
to said hypoxic condition for less than one hour, or less than thirty minutes, or is not d to a
hypoxic condition, during collection, enrichment or isolation. In another specific embodiment,
said population of placental cells is not exposed to shear stress during collection, enrichment or
isolation.
Cells, e. g., placental perfusate cells, hematopoietic cells, e.g., CD34+ hematopoietic
stem cells; NK cells produced using the processes described herein, e.g., activated NK cells or
TSPNK cells (e.g., NK progenitor cells), isolated adherent placental cells provided herein can be
cryopreserved, e.g., in eservation medium in small containers, e.g., ampoules or septum
vials. In specific ments, cells are or have been erved at a concentration of about 1
X 104 — 5 X 108 cells per mL. In specific embodiments, cells are or have been cryopreserved at a
tration of about 1 X 106 — 1.5 X 107 cells per mL. In more specific embodiments, cells
provided herein are or have been eserved at a concentration of about 1 X 104, 5 X 104, l X
105, 5 x 105, 1 x 10", 5 x 106, 1 x 107, 1.5 x 107 cells per mL. In certain embodiments, NK cells
have been cryopreserved before stration. In certain embodiments, NK cells have not been
cryopreserved before administration.
[003 04] Suitable eservation medium includes, but is not limited to, normal saline,
culture medium including, e.g, growth medium, or cell freezing medium, for example
commercially available cell freezing medium, e.g., C2695, C2639 or C6039 (Sigma), CryoStor®
CS2, CryoStor® CS5 or CryoStor®CSlO (BioLife Solutions). In one embodiment,
cryopreservation medium comprises DMSO (dimethylsulfoxide), at a concentration of, e.g.,
about 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10% (v/v). Cryopreservation medium may comprise additional
agents, for e, methylcellulose, dextran, albumin (e.g., human serum albumin), trehalose,
and/or glycerol. In certain ments, the cryopreservation medium comprises about 1%-
% DMSO, about 25%-75% dextran and/or about 20-60% human serum albumin (HSA). In
n embodiments, the cryopreservation medium comprises about l%-lO% DMSO, about
%—75% trehalose and/or about 20-60% human HSA. In a specific embodiment, the
cryopreservation medium comprises 5% DMSO, 55% dextran and 40% HSA. In a more specific
embodiment, the cryopreservation medium comprises 5% DMSO, 55% dextran (10% w/v in
normal saline) and 40% HSA. In another specific embodiment, the cryopreservation medium
comprises 5% DMSO, 55% trehalose and 40% HSA. In a more specific embodiment, the
cryopreservation medium comprises 5% DMSO, 55% ose (10% w/v in normal saline) and
40% HSA. In another specific embodiment, the cryopreservation medium comprises CryoStor®
CS5 In another specific embodiment, the eservation medium comprises CryoStor®CSlO.
[003 05] Cells can be cryopreserved by any of a variety of methods known in the art, and at
any stage of cell culturing, expansion or differentiation. For example, cells provided herein can
be cryopreserved right after ion from the origin tissues or organs, e.g., tal perfusate
or umbilical cord blood, or during, or after either the first or second step of the methods outlined
above. In certain embodiments, the hematopoietic cells, e.g., hematopoietic stem or progenitor
cells are cryopreserved within about 1, 5, 10, 15, 20, 30, 45 minutes or within about 1, 2, 4, 6,
, 12, 18, 20 or 24 hours after ion from the origin tissues or organs. In certain
embodiments, said cells are cryopreserved within 1, 2 or 3 days after ion from the origin
tissues or organs. In certain ments, said cells are cryopreserved after being cultured in a
first medium as described above, for about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
18, 19, 20, 21, 22, 23, 24, 25, 26, 27 or 28 days. In some embodiments, said cells are
cryopreserved after being ed in a first medium as described above, for about 1, 2, 3, 4, 5, 6,
7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27 or 28 days, and in a
second medium for about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22,
23, 24, 25, 26, 27 or 28 days as described above. In some embodiments, when TSPNK cells
(e.g., NK progenitor cells) are made using a three-step process described herein, said cells are
cryopreserved after being cultured in a first medium about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13,
14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, or 25 days; and/or after being cultured in a second
medium about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, or
days; and/or after being ed in a third medium about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12,
13, 14, 15, 16, 17, 18, 19, 20,21, 22,23, 24, or 25 days. In a specific embodiment, NK
progenitor cells are made using a three-step process described herein, and said cells are
eserved after being ed in a first medium for 9 days, after being cultured in a second
medium for 5 days, and after being cultured in a third medium for 7 days.
In one aspect, a population ofNK cells, e.g., activated NK cells, are produced by a
process comprising: (a) seeding a population of hematopoietic stem or progenitor cells in a first
medium comprising interleukin-15 (IL-15) and, optionally, one or more of stem cell factor
(SCF) and interleukin-7 (IL-7), wherein said IL-15 and optional SCF and IL-7 are not comprised
within an undefined component of said medium, such that the population expands, and a
plurality of hematopoietic stem or itor cells within said population of hematopoietic stem
or progenitor cells differentiate into NK cells during said expanding; (b) expanding the cells
from step (a) in a second medium comprising interleukin-2 (IL-2), to produce a population of
activated NK cells, and (c) cryopreserving the NK cells from step (b) in a cryopreservation
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medium. In a specific ment, said step (c) further comprises (1) preparing a cell
suspension solution; (2) adding cryopreservation medium to the cell suspension solution from
step (1) to obtain cryopreserved cell suspension; (3) cooling the cryopreserved cell suspension
from step (3) to obtain a cryopreserved sample; and (4) storing the cryopreserved sample below -
80 °C. In certain embodiments, the method includes no intermediary steps between step (a) and
(b), and between step (b) and (c), and/or no additional culturing steps prior to step (a).
In another embodiment, the cryopreserving of a population ofNK cells, e.g.,
activated NK cells or TSPNK cells (e.g., NK progenitor , comprises: (a) expanding a
population of hematopoietic stem or progenitor cells in a first medium comprising one or more
of stem cell factor (SCF), IL-2, interleukin-7 (IL-7), interleukin-15 (IL-15) and heparin, and
wherein said SCF, IL-2, IL-7 and IL-15 are not comprised within an undefined ent of
said medium, and wherein a plurality of hematopoietic stem or progenitor cells within said
population of hematopoietic stem or progenitor cells differentiate into NK cells during said
expanding, (b) expanding the cells from step (a) in a second medium comprising interleukin-2
(IL-2), to produce activated NK cells; and (c) eserving the NK cells from step (b) in a
cryopreservation medium. In a specific embodiment, said step (c) further ses (1)
ing a cell suspension solution; (2) adding cryopreservation medium to the cell suspension
solution from step (1) to obtain cryopreserved cell suspension; (3) cooling the cryopreserved cell
suspension from step (3) to obtain a cryopreserved sample, and (4) storing the cryopreserved
sample below -80 °C. In n embodiments, the method includes no intermediary steps
between step (a) and (b), and between step (b) and (c).
Cells are preferably cooled in a lled-rate freezer, e.g., at about 0.1, 0.3, 0.5, l,
or 2 °C/min during cryopreservation. A preferred cryopreservation temperature is about -80 °C
to about -180 °C, preferably about -l25 °C to about —l40 °C. Cryopreserved cells can be
transferred to liquid nitrogen prior to thawing for use. In some embodiments, for example, once
the ampoules have reached about -90 °C, they are transferred to a liquid nitrogen e area.
eserved cells preferably are thawed at a temperature of about 25 °C to about 40 °C,
preferably to a temperature of about 37 °C. In certain embodiments, the cryopreserved cells are
thawed after being cryopreserved for about 1, 2, 4, 6, 10, 12, 18, 20 or 24 hours, or for about 1,
2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27 or 28
days. In certain ments, the cryopreserved cells are thawed after being cryopreserved for
about 1, 2, 3,4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26,27
or 28 months. In certain embodiments, the cryopreserved cells are thawed after being
cryopreserved for about 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 years.
Suitable thawing medium includes, but is not limited to, normal saline, plasmalyte
culture medium including, for example, growth medium, e.g., RPMI medium. In preferred
embodiments, the thawing medium comprises one or more of medium supplements (e.g.,
nutrients, cytokines and/or factors), Medium supplements le for thawing cells provided
herein include, for e without limitation, serum such as human serum AB, fetal bovine
serum (PBS) or fetal calf serum (FCS), vitamins, human serum albumin (HSA), bovine serum
albumin (BSA), amino acids (e.g., L-glutamine), fatty acids (e.g., oleic acid, linoleic acid or
palmitic acid), insulin (e.g., recombinant human insulin), transferrin (iron saturated human
transferrin), aptoethanol, stem cell factor (SCF), Fms-like-tyrosine kinase 3 ligand (Flt3-
L), cytokines such as eukin-2 (IL-2), interleukin-7 (IL-7), interleukin-15 (IL-15),
thrombopoietin (Tpo) or heparin. In a specific embodiment, the thawing medium useful in the
methods provided herein comprises RPMI. In r specific embodiment, said thawing
medium comprises plasmalyte. In another specific embodiment, said thawing medium
comprises about 05-20% FBS. In another specific embodiment, said thawing medium
comprises about 1, 2, 5, 10, 15 or 20% FBS. In another specific embodiment, said thawing
medium comprises about 0.5%-20% HSA. In r c embodiment, said thawing
medium comprises about 1, 2.5, 5, 10, 15, or 20% HSA. In a more specific embodiment, said
thawing medium comprises RPMI and about 10% FBS. In another more c embodiment,
said thawing medium comprises plasmalyte and about 5% HSA.
The cryopreservation methods provided herein can be optimized to allow for long-
term storage, or under conditions that inhibit cell death by, e.g., apoptosis or necrosis. In one
embodiments, the post-thaw cells comprise greater than 60%, 65%, 70%, 75%, 80%, 85%, 90%,
95% or 98% of viable cells, as ined by, e.g., automatic cell r or trypan blue method.
In another embodiment, the post-thaw cells comprise about 0.5, 1, 5, 10, 15, 20 or 25% of dead
cells. In another embodiment, the post-thaw cells comprise about 0.5, 1, 5, 10, 15, 20 or 25% of
early apoptotic cells. In r embodiment, about 0.5, 1, 5, 10, 15 or 20% of post-thaw cells
undergo sis after 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13,14, 15,16, 17,18, 19, 20, 21, 22,
23, 24, 25, 26, 27 or 28 days after being thawed, e.g., as determined by an apoptosis assay (e.g.,
3 or AnnV/PI Apoptosis assay kit). In certain ments, the post-thaw cells are re-
eserved after being cultured, expanded or differentiated using methods provided herein.
.3. Genetically Modified NK Cells
In another aspect, NK cells can be genetically modified to enhance target specificity
and/or homing specificity.
In some embodiments, the genetically modified NK cells are NK cells that comprise a
chimeric n receptor (CAR). CAR is an artificial membrane—bound protein that directs an
immune cell (e.g., a T lymphocyte) to an n, and stimulates the immune cell to kill a cell
ying the antigen. See, e. g., Eshhar, US. Patent No. 7,741,465; US. Patent Application
ation No. 093 842, International Application ation No. 85, and
International Application Publication No. . At a m, the CAR comprises
an extracellular domain that binds to an antigen, e.g., an antigen on a cell, a transmembrane
domain, and an intracellular (cytoplasmic) signaling domain (i.e., intracellular stimulatory
domain) that transmits a primary activation signal to an immune cell. All other conditions being
satisfied, when the CAR is expressed on the surface of, e.g., a T lymphocyte, for example, a
primary T lymphocyte, and the extracellular domain of the CAR binds to an antigen, the
intracellular signaling domain its a signal to the T lymphocyte to activate and/or
proliferate, and, if the antigen is present on a cell surface, to kill the cell expressing the antigen.
Because some immune cells, e.g., T lymphocytes and NK cells, require two signals, a piimary
activation signal and a costimulatory signal, in order to maximally activate, CARs can also
optionally comprise a costimulatory domain such that binding of the antigen to the extracellular
domain results in transmission of both a primary activation signal and a costimulatory signal.
Adaptive immune responses are initiated in secondary lymphoid organs, including the
lymph nodes. B cells and T cells are sequestered in distinct regions of the lymph nodes, termed
the “B cell zone,” located in the outer cortex of the lymph node, or les, and the “T cell
zone,” which is more diffusely distributed in the area surrounding the follicles (also known as the
paracortex) respectively. B cells and T cells express receptors that allow them to home to these
respective zones so that they can be exposed to antigen. Intact antigens are present in the B cell
zone, whereas in the T cell zone, antigens are presented by antigen-presenting cells, such as
dendritic cells. Intact antigens, such as tumor antigens, are also present at the site of the tumor.
In some embodiments, the genetically modified NK cells are NK cells that comprise a
homing receptor, which causes a cell comprising said homing receptor to home to a particular
anatomical zone, a particular tissue, or a particular type of cell, e.g., B cell zone of the lymph
nodes, gastrointestinal tract, or skin.
In certain embodiments, the genetically modified NK cells are NK cells that comprise
both a CAR and a homing or as described herein.
Without wishing to be bound by any particular mechanism or theory, it is thought that
when the genetically modified cells herein s homing ors that cause a cell expressing
said homing receptor to home to a particular zone, they are more likely to be d to native
n, where the cells, for example, cells expressing a CAR, are capable of being activated.
The NK cells that comprise a CAR and/or a homing receptor can be generated by any
method known in the art. In some embodiments, the NK cells comprising a CAR and/or a
homing receptor are first produced as bed in Section 5.2 (e.g., by a two-step process or by
a three-step process), and are then engineered to express the CAR and/or the homing receptor by
introducing the NK cells to (e.g., by ection) one or more vectors comprising the nucleic
acid sequence(s) encoding the CAR and/or the homing receptor. In some embodiments, the cells
(e.g., CD34+ hematopoietic stem cells), from whom NK cells can be produced, are first
engineered to express a CAR and/or a homing receptor by introducing to the cells (e.g., by
transfection) one or more vectors comprising the nucleic acid sequence(s) encoding the CAR
and/or the homing receptor, and are then used to derive NK cells comprising the CAR and/or the
homing or by any process described in Section 5.2 (e.g, a two-step process or a three-step
process).
.3.1. General CAR Structure and Intracellular Domain
In certain ments, the intracellular domain of the CAR is or comprises an
intracellular domain or motif of a protein that is expressed on the surface of immune cells and
triggers activation and/or proliferation of said NK cells. Such a domain or motif is able to
transmit a primary n-binding signal that is necessary for the activation of a NK cell in
response to the n’s binding to the CAR’s extracellular portion. Typically, this domain or
motif ses, or is, an ITAM (immunoreceptor tyrosine-based activation motif). ITAM-
containing polypeptides suitable for CARs include, for example, the zeta CD3 chain (CD3C) or
ITAM-containing portions thereof. In a specific embodiment, the intracellular domain is a CD36;
intracellular ing domain. In other specific embodiments, the intracellular domain is from a
cyte receptor chain, a 3 complex protein, an Fc receptor subunit or an IL-2
receptor subunit.
In certain embodiments, the CAR additionally comprises one or more mulatory
domains or motifs, e.g., as part of the intracellular domain of the ptide. The one or more
co-stimulatory domains or motifs can be, or comprise, one or more of a co-stimulatory CD27
polypeptide ce, a co-stimulatory CD28 polypeptide sequence, a co-stimulatory 0X40
(CD134) polypeptide sequence, a co—stimulatory 4-1BB (CD137) polypeptide sequence, a costimulatory
ble T-cell costimulatory (ICOS) polypeptide sequence, a co-stimulatory PD-l
polypeptide sequence, a co-stimulatory CTLA—4 polypeptide sequence, a co—stimulatory NKp46
polypeptide sequence, a mulatory I\Kp44 polypeptide sequence, a mulatory NKp30
polypeptide sequence, a co—stimulatory 1\KG2D polypeptide sequence, a co—stimulatory DAPlO
polypeptide sequence, a co-stimulatory DAP12 polypeptide sequence, or other costimulatory
domain or motif.
The transmembrane region can be any transmembrane region that can be incorporated
into a functional CAR, typically a embrane region from a CD4 or a CD8 molecule.
.3.2. CAR Extracellular Domain
The extracellular domain of the polypeptide binds to an antigen of interest. In certain
embodiments, the extracellular domain comprises a receptor, or a portion of a receptor, that
binds to said antigen. The extracellular domain may be, e.g., a receptor, or a portion of a
receptor, that binds to said antigen. In certain embodiments, the extracellular domain comprises,
or is, an antibody or an n-binding portion thereof. In specific embodiments, the
extracellular domain comprises, or is, a single-chain FV domain. The single-chain FV domain
can comprise, for e, a VL linked to VH by a flexible linker, wherein said VL and VH are
from an antibody that binds said antigen.
The antigen to which the extracellular domain of the polypeptide binds can be any
antigen of interest, e.g., can be an antigen on a tumor cell or an antigen on an infected cell. The
tumor cell may be, e.g., a cell in a solid tumor, or a cell of a blood cancer. The n can be
any antigen that is expressed on a cell of any tumor or cancer type, e.g., cells of a lymphoma, a
lung cancer, a breast cancer, a prostate cancer, an adrenocortical carcinoma, a d carcinoma,
a nasopharyngeal carcinoma, a melanoma, e.g., a malignant melanoma, a skin carcinoma, a
colorectal carcinoma, a d tumor, a desmoplastic small round cell tumor, an endocrine
2015/068069
tumor, an Ewing a, a peripheral ive neuroectodermal tumor, a solid germ cell
tumor, a hepatoblastoma, a neuroblastoma, a non-rhabdomyosarcoma soft tissue a, an
osteosarcoma, a retinoblastoma, a rhabdomyosarcoma, a Wilms tumor, a glioblastoma, a
myxoma, a fibroma, a lipoma, or the like. In more c embodiments, said lymphoma can be
chronic lymphocytic leukemia (small lymphocytic lymphoma), B-cell prolymphocytic leukemia,
plasmacytic lymphoma, Waldenstrom macroglobulinemia, splenic marginal zone
lymphoma, plasma cell myeloma, plasmacytoma, extranodal marginal zone B cell lymphoma,
MALT lymphoma, nodal marginal zone B cell lymphoma, follicular lymphoma, mantle cell
lymphoma, diffuse large B cell lymphoma, mediastinal (thymic) large B cell lymphoma,
intravascular large B cell lymphoma, primary effusion lymphoma, Burkitt’s lymphoma, T
lymphocyte prolymphocytic leukemia, T lymphocyte large granular lymphocytic leukemia,
aggressive NK cell leukemia, adult T cyte leukemia/lymphoma, extranodal NK/T
lymphocyte lymphoma, nasal type, enteropathy-type T lymphocyte lymphoma, hepatosplenic T
lymphocyte lymphoma, blastic NK cell ma, mycosis des, Sezary syndrome,
primary cutaneous anaplastic large cell lymphoma, lymphomatoid papulosis,
angioimmunoblastic T lymphocyte lymphoma, peripheral T lymphocyte lymphoma
(unspecified), stic large cell lymphoma, Hodgkin lymphoma, a non-Hodgkin lymphoma,
or multiple myeloma.
In certain ments, the antigen is a tumor-associated antigen (TAA) or a tumor-
specific n (TSA). In various specific embodiments, without limitation, the tumor-
associated antigen or tumor-specific antigen is Her2, prostate stem cell antigen (PSCA), alpha-
fetoprotein (AFP), carcinoembryonic antigen (CEA), cancer antigen-125 (CA-125), CAl9-9,
calretinin, MUC-l, epithelial membrane n (EMA), epithelial tumor antigen (ETA),
tyrosinase, melanoma-associated antigen (MAGE), CD19, CD20, CD34, CD45, CD99, CD117,
chromogranin, cytokeratin, desmin, glial fibrillary acidic protein , gross cystic disease
fluid protein (GCDFP-lS), HMB-45 antigen, high molecular weight ma-associated
antigen (HMW-MAA), protein melan-A (MART-l), myo—Dl, muscle-specific actin (MSA),
neurofilament, neuron-specific enolase (NSE), placental alkaline phosphatase, synaptophysis,
thyroglobulin, thyroid transcription factor-l, the dimeric form of the pyruvate kinase isoenzyme
type M2 (tumor M2-PK), an al ras protein, or an abnormal p53 protein.
In certain embodiments, the TAA or TSA is a cancer/testis (CT) antigen, e.g., BAGE,
CAGE, CTAGE, FATE, GAGE, HCA661, HOM-TES-85, MAGEA, MAGEB, MAGEC, NA88,
NY-ESO-1,NY-SAR—35, -l, SPANXBl, SPA17, SSX, SYCPl, or TPTE.
In certain other embodiments, the TAA or TSA is a carbohydrate or ganglioside, e.g.,
fuc-GMl, GM2 (oncofetal antigen—immunogenic-l; OFA-I—l); GD2 (OFA-I-2), GM3, GD3, and
the like.
In certain other ments, the TAA or TSA is alpha-actinin-4, Bage—l, BCR-
ABL, Bcr-Abl fusion n, beta-catenin, CA 125, CA 15-3 (CA 27.29\BCAA), CA 195, CA
242, CA-50, CAM43, Casp-8, cdc27, cdk4, cdkn2a, CEA, coa-l, dek-can fusion protein, EBNA,
EF2, Epstein Barr Virus antigens, ETV6-AML1 fusion protein, HLA—A2, HLA-Al 1, hsp70—2,
KIAAO205, Mart2, Mum-l, 2, and 3, neo-PAP, myosin class I, OS-9, pml-RARoc fusion protein,
PTPRK, K-ras, N—ras, triosephosphate isomerase, Gage 3,4,5,6,7, GnTV, HerV-K—mel, Lage—l,
NA-88, -l/Lage-2, SP17, SSX-2, TRP2-Int2, gp100 (Pmel 17), tyrosinase, TRP-l, TRP-
2, MAGE-l, MAGE-3, RAGE, , GAGE-2, pl5(58), RAGE, , SCP-l, Hom/Mel-40,
PRAME, p53, H-Ras, HER-2/neu, E2A-PRL, H4-RET, IGH—IGK, MYL-RAR, human
papillomaVirus (HPV) antigens E6 and E7, TSP-180, MAGE-4, MAGE-5, MAGE—6, p185erbB2,
p180erbB-3, c—met, nm—23H1, PSA, —4, CA l9-9, CA 72-4, CAM 17.1, NuMa, K-ras,
13-Catenin, Mum-1, p16, TAGE, PSMA, CT7, telomerase, 43-9F, 5T4, 791Tgp72, 13HCG,
BCA225, BTAA, CD68\KP1, CO-029, FGF-5, G250, Ga733 (EpCAM), HTgp-175, M344, MA-
50, MG7-Ag, MOV18, NB\70K, l, RCASl, SDCCAG16, TA-90, TAAL6, TAG72,
TLP, TPS, CD19, CD22, CD27, CD30, CD70, GD2 (ganglioside G2), EGFRVIII (epidermal
growth factor variant III), sperm protein 17 (Spl7), mesothelin, PAP (prostatic acid
phosphatase), prostein, TARP (T cell receptor gamma alternate reading frame protein), Trp-p8,
STEAPl ransmembrane epithelial n of the prostate 1), an al ras protein, or an
abnormal p53 protein. In another specific embodiment, said tumor-associated antigen or tumor-
specific n is in UNB3 (CD61), galactin, K-Ras (V-Ki-rasZ n rat sarcoma Viral
oncogene), or Ral-B.
In specific embodiments, the TAA or TSA is CD20, CD123, CLL-l, CD38, CS—l,
CD138, RORl, FAP, MUCl, PSCA, EGFRVIII, EPHA2, or GD2. In further specific
embodiments, the TAA or TSA is CD123, CLL-l, CD3 8, or CS-l. In a specific embodiment,
the extracellular domain of the CAR binds CS-l. In a further specific embodiment, the
extracellular domain comprises a single-chain version of elotuzumab and/or an antigen-binding
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fragment of umab. In a specific embodiment, the extracellular domain of the CAR binds
CD20. In a more specific embodiment, the extracellular domain of the CAR is an scFv or
antigen-binding fragment thereof binds to CD20.
Other tumor-associated and tumor-specific antigens are known to those in the art.
] Antibodies, and scFvs, that bind to TSAs and TAAs are known in the art, as are
nucleotide sequences that encode them.
In certain specific embodiments, the antigen is an antigen not considered to be a TSA
or a TAA, but which is nevertheless ated with tumor cells, or damage caused by a tumor.
In specific embodiments, the antigen is a tumor microenvironment-associated antigen (TMAA).
In certain embodiments, for example, the TMAA is, e.g., a growth factor, cytokine or interleukin,
e.g., a growth factor, cytokine, or interleukin associated with angiogenesis or vasculogenesis.
Such growth factors, cytokines, or interleukins can include, e.g., vascular elial growth
factor (VEGF), basic fibroblast growth factor (bFGF), platelet-derived growth factor (PDGF),
cyte growth factor (HGF), insulin-like growth factor (IGF), or interleukin-8 (IL-8).
Tumors can also create a hypoxic environment local to the tumor. As such, in other specific
embodiments, the TMAA is a hypoxia—associated factor, e.g, HIF-lor, HIF-lB, HIF-ZOL, HIP—2B,
HIF-30t, or HIF-3B. Tumors can also cause localized damage to normal tissue, causing the
release of molecules known as damage associated molecular n molecules (DAMPs; also
known as alarmins). In certain other c embodiments, therefore, the TMAA is a DAMP,
e. g., a heat shock protein, chromatin—associated protein high mobility group box 1 (HMGB 1),
SlOOA8 (MRP8, calgranulin A), SlOOA9 (MRPl4, calgranulin B), serum amyloid A (SAA), or
can be a deoxyribonucleic acid, adenosine triphosphate, uric acid, or heparin sulfate. In specific
embodiments, the TMAA is VEGF-A, EGF, PDGF, IGF, or bFGF.
In a specific embodiment, in which the cancer a gastrointestinal cancer, for example,
liver cancer, stomach cancer, esophageal cancer, gallbladder cancer, colorectal cancer, anal
cancer, or pancreatic cancer, the antigen is an antigen specific for or associated with a
gastrointestinal cancer. In a specific embodiment, NK cells comprise a intestinal homing
receptor and also comprise a CAR with an extracellular domain that binds to an n
ated with a intestinal cancer. In a specific embodiment, the extracellular domain of
the CAR binds CEA. In other specific embodiments, the extracellular domain of the CAR binds
Her2, CA242,MUC1, CA125, or CA19-9.
In a specific embodiment, in which the cancer is a skin cancer, for example,
melanoma, squamous cell carcinoma, or basal cell carcinoma, the antigen is an antigen specific
for or associated with a skin cancer. In a c embodiment, NK cells comprise a skin homing
receptor and also comprise a CAR with an extracellular domain that binds to an antigen
associated with a skin cancer. In a specific embodiment, the ellular domain of the CAR
binds HMW—MAA. In other specific ments, the ellular domain of the CAR binds
Her2, GD2, GD3, CEA, or SPAG9,
In certain embodiments, the extracellular domain is joined to said transmembrane
domain by a linker, spacer or hinge polypeptide sequence, e.g., a sequence from CD28.
.3.3. atory System Homing Receptors
In certain ments, the homing receptor causes a cell comprising said homing
receptor to home to the circulatory system. Such a receptor is referred to herein as a “circulatory
system homing or.” In various ments, the circulatory system homing receptor is a
chemotactic receptor. In specific embodiment, the chemotactic receptor is CXCR4, VEGFRZ, or
CCR7.
In one embodiment, the homing receptor causes a cell comprising said homing
receptor to home to the bone marrow. Such a receptor is referred to herein as a “bone marrow
homing receptor.” In specific embodiments, the bone marrow homing receptor is CXCR4, for
example, human CXCR4. GenBankTM accession numbers 008540.1 and NM_003467.2
provide exemplary nucleotide sequences for human CXCR4. GenBankTM accession numbers
NP_001008540.1 and NP_003458.1 provide exemplary amino acid sequences for human
CXCR4. Exemplary nucleotide and amino acid sequences for human homing receptors can be
found in Table 1.
In another embodiment, the homing receptor causes a cell comprising said homing
receptor to home to a secondary lymphoid organ, e.g, a lymph node. Such a or is referred
to herein as a “secondary lymphoid organ homing receptor.” In c embodiments, the
secondary lymphoid organ homing or is CCR7, for example, human CCR7. GenBankTM
accession numbers NM_001301714.1, NM_001301716.1, NM_001301717.1, NM_001301718.1
and NM_0018383 provide exemplary tide sequences for human CCR7. GenBankTM
accession s NP_001288643.1, NP_001288645.1 NP_001288646.1, NP_001288647.1 and
NP_001829.1 provide exemplary amino acid sequences for human CCR7. Exemplary nucleotide
and amino acid sequences for human homing receptors can be found in Table 1.
In another embodiment, the homing or causes a cell comprising said homing
receptor to home to the vascular endothelium. Such a receptor is ed to herein as a “vascular
endothelium homing receptor.” In specific embodiments, the vascular endothelium homing
receptor is VEGFR2, for example, human VEGFR2. GenBankTM ion number
NM_002253.2 provides exemplary nucleotide sequences for human VEGFR2. GenBankTM
accession number NP_002244.1 provides exemplary amino acid sequences for human VEGFR2.
ary nucleotide and amino acid sequences for human homing receptors can be found in
Table 1.
In another embodiment, the homing receptor causes a cell comprising said homing
receptor to home to the B cell zone of the lymph nodes, e.g., the follicles of the lymph node.
Such a receptor is referred to herein as a “B cell zone homing receptor.” In specific
embodiments, the B cell zone homing or is CXCRS, for e, human CXCRS.
GenBankTM accession numbers NM_001716.4 and NM_032966.2 provide exemplary nucleotide
sequences for human CXCRS. GenBankTM accession numbers NP_116743.1 and NP_001707.1
provide exemplary amino acid sequences for human CXCRS. Exemplary nucleotide and amino
acid ces for human homing receptors can be found in Table 1.
In some embodiments, the step of ering a NK cell to comprise a circulatory
system homing or comprises a step of introducing to the cells one or more vectors
comprising the receptor nucleic acid sequence(s), i.e., the nucleic acid sequence (s) encoding the
receptor(s). In specific embodiments, the vector comprises the nucleic acid ce for human
CXCR4, CCR7, VEGFR2 or CXCRS. In a certain embodiment, the step of engineering a NK
cell to comprise a circulatory system homing receptor is performed by any method known to one
of skill in the art.
Also bed herein is a method of generating genetically engineered NK cells that
home to the circulatory system, comprising a step of engineering a NK cell to se a
circulatory system homing receptor, e.g., CXCR4, CCR7, VEGFR2 or CXCRS, wherein said
circulatory system homing receptor is expressed by the cell at a sufficient level or sufficient
amount to cause the cell to home to the circulatory system. In some embodiments, the step of
engineering a NK cell to comprise a circulatory system homing or comprises a step of
introducing to the cells one or more vectors comprising the receptor nucleic acid sequence(s),
2015/068069
1'. e., the nucleic acid sequence (s) encoding the receptor(s). In specific embodiments, the vector
comprises the c acid sequence for human CXCR4, CCR7, VEGFRZ or CXCRS. In a
certain ment, the step of engineering a NK cell to comprise a circulatory system homing
receptor is performed by any method known to one of skill in the art.
.3.4. Gastrointestinal Homing Receptors
In one embodiment, the homing receptor causes a cell comprising said homing
receptor to home to the intestinal tract, e.g., gastrointestinal organs, tissues, or cells. Such
a receptor that causes a cell to home to the gastrointestinal tract is referred to herein as a
“gastrointestinal homing receptor.” In certain embodiments, the gastrointestinal homing or
is CCR9 or integrin 0t4B7, for example, human CCR9 or human integrin 0L4B7. kTM
accession numbers NM_031200.2 and NM0012563 69.1 provide exemplary nucleotide sequences
for human CCR9. GenBankTM accession numbers 477.1 and NP_001243298.1 provide
exemplary amino acid sequences for human CCR9. GenBankTM accession numbers
NM_000885.4 and NM_000889.2 provide exemplary nucleotide sequences for human (14 and
human B7, respectively. GenBankTM ion numbers NP_000876.3 and NP_000880.1
provide exemplary amino acid sequences for human 0L4 and human B7, respectively. Exemplary
tide and amino acid sequences for human homing receptors can be found in Table 1. In
some embodiments, the I\K cells further comprise a second gastrointestinal homing receptor. In
some embodiments, the I\K cells comprise a first gastrointestinal homing receptor, wherein the
first gastrointestinal homing receptor is CCR9, and further comprise a second gastrointestinal
homing receptor, wherein the second gastrointestinal homing receptor is integrin (1457.
In other
specific ments, the NK cells comprise the gastrointestinal-homing receptor CXCR3.
In certain embodiments, the NK cells comprising one or more gastrointestinal homing
receptors are expanded, activated, or both expanded and activated in the presence of a Vitamin A
metabolite. In specific embodiments, the ion, activation, or both expansion and activation
occurs in vivo, in vitro, or ex vivo. In specific embodiments, the Vitamin A metabolite is retinoic
acid. In certain embodiments, the NK cells comprising one or more gastrointestinal homing
receptors additionally comprise a B cell zone homing receptor. In c embodiments, the B
cell zone homing receptor is CXCRS.
] Also described herein are methods of generating cally modified NK cells that
home to the intestinal tract, e.g., gastrointestinal organs, skin, or tissue. In certain
embodiments, NK cells comprising one or more homing ors that that cause a cell
comprising the one or more receptors to home to the intestinal tract, e.g., CCR9 or integrin
(1437, are generated by a method comprising a step of engineering a NK cell to express one or
more gastrointestinal homing receptors. In some embodiments, the step of engineering a NK cell
to comprise one or more gastrointestinal homing ors comprises introducing to the cells one
or more vectors comprising a nucleic acid sequence encoding the homing receptor. In specific
embodiments, the vector comprises the c acid sequence for human CCR9, the nucleic acid
sequence for human integrin (1437, or both.
In certain embodiments, NK cells that home to the gastrointestinal tract are generated
by a method comprising a step of treating the cells with a molecule that induces the expression of
one or more gastrointestinal homing receptors, e.g, CCR9 or (x487. In specific embodiments,
the molecule is Vitamin A.
In n embodiments, the method for generating the genetically modified NK cells
that se one or more receptors that that cause a cell comprising the one or more receptors
to home to the gastrointestinal tract comprises a step of expanding the cells, which step is carried
out in the presence of a vitamin A metabolite. In certain embodiments, the method for
generating the genetically modified NK cells that comprise one or more receptors homing to the
gastrointestinal tract comprises a step of activating the cells, which step is carried out in the
presence of a vitamin A metabolite. In certain embodiments, both the expanding and activating
steps are carried out in the presence of a vitamin A metabolite. In certain embodiments the
vitamin A metabolite is retinoic acid. In a certain embodiment, the step of ering a NK cell
to se a gastrointestinal homing receptor is performed by any method known to one of skill
in the art.
.3.5. Skin Homing Receptors
In one embodiment, the homing receptor causes a cell comprising said homing
receptor to home to the skin, e.g., skin , or skin cells. In certain embodiments, the skin
homing receptor is CCRlO, CCR8, CCR4, or CLA, for example, human CCRlO, human CCR8,
human CCR4, or human CLA. GenBankTM accession s 602.2 and AF215981.1
provide exemplary nucleotide sequences for human CCRlO. GenBankTM accession numbers
NP_057686.2 and P460923 provide exemplary amino acid sequences for human CCRlO.
GenBankTM accession numbers NM_0052013 and BC107159.1 provide ary nucleotide
sequences for human CCR8. GenBankTM accession s NP_005192.1 and AAIO7 160.1
provide exemplary amino acid ces for human CCR8. GenBankTM accession number
NM_005508.4 es an exemplary nucleotide sequence for human CCR4. GenBankTM
accession number P5 1679.1 provides an exemplary amino acid sequence for human CCR4.
GenBankTM accession numbers NM_001206609.1 and NM_OO3 006.4 provide exemplary
nucleotide sequences for human CLA. GenBankTM accession numbers NP_001193538.1 and
NP_002997.2 provide exemplary amino acid ces for human CLA. Exemplary nucleotide
and amino acid sequences for human homing receptors can be found in Table 1. In some
embodiments, the NK cells further se a second skin homing receptor. In some
embodiments, the NK cells comprise a first skin homing receptor, wherein the first skin homing
receptor is CCRlO, and further comprise a second skin homing receptor, wherein the second skin
homing receptor is CLA. In some embodiments, the NK cells comprise a first skin homing
receptor, wherein the first skin homing receptor is CCRlO, and further comprise a second skin
homing receptor, wherein the second skin homing receptor is CCR4. In some embodiments, the
NK cells comprise a first skin homing receptor, wherein the first skin homing receptor is CCR4,
and further comprise a second skin homing receptor, wherein the second skin homing receptor is
CLA. In some embodiments, the NK cells r se a third skin homing receptor. In
some embodiments, the NK cells comprise a first skin homing receptor, wherein the first skin
homing receptor is CCRlO, further comprise a second skin homing receptor, wherein the second
skin homing receptor is CCR4, and further comprise a third skin homing receptor, wherein the
third skin homing receptor is CLA. In some embodiments, the NK cells comprise a first skin
homing receptor, wherein the first skin homing receptor is CCR8, and further comprise a second
skin homing receptor, wherein the second skin homing or is CLA, CCR4, or CCRlO. In
some embodiments, the NK cells comprise a first skin homing receptor, wherein the first skin
homing or is CCR8, further se a second skin homing receptor, wherein the second
skin homing receptor is CLA, CCR4, or CCRlO, and further comprise a third skin homing
receptor, wherein the third skin homing receptor is distinct from the second skin homing
receptor, and is selected from the group consisting of CLA, CCR4, and CCRlO. In some
embodiments, the NK cells further comprise a third skin homing or. In some
embodiments, the NK cells comprise a first skin homing receptor, wherein the first skin homing
receptor is CCRlO, further comprise a second skin homing receptor, wherein the second skin
homing receptor is CCR4, further comprise a third skin homing receptor, wherein the third skin
homing receptor is CLA, and further compiise a fourth skin homing receptor, wherein the fourth
skin homing receptor is CCR8. In certain embodiments, the NK cells comprise one or more skin
homing receptors. In other specific embodiments, the NK cells se the skin-homing
receptor CCR6.
] In certain embodiments, the NK cells comprising one or more skin homing receptors
are expanded, activated, or both expanded and activated in the presence of a Vitamin D
metabolite. In specific embodiments, the expansion, activation, or both expansion and activation
occurs in vivo, in vitro, or ex vivo. In specific ments, the Vitamin D metabolite is 1,25-
dihydroxycholecalciferol (l,25(OH)2D3). In certain embodiments, the NK cells sing one
or more skin homing receptors are expanded, activated, or both expanded and activated in the
presence of IL-12. In specific ments, the expansion, activation, or both expansion and
activation occurs in vivo, in vitro, or ex vivo. In more specific embodiments, the NK cells
comprising one or more skin homing receptors are expanded, activated, or both expanded and
ted in the presence of a Vitamin D metabolite and IL-12. In specific embodiments, the
expansion, activation, or both expansion and activation occurs in vivo, in vitro, or ex vivo. In
n embodiments, the NK cells comprising one or more skin homing ors additionally
se a B cell zone homing receptor. In specific embodiments, the B cell zone homing
receptor is CXCRS.
Also described herein are methods of generating genetically modified NK cells that
home to the skin, e.g, skin tissue or cells. In certain embodiments, NK cells that home to the
skin are generated by a method comprising a step of engineering the NK cells to comprise a skin
homing receptor, e.g., CCR4, CCR8, CCRlO, or CLA. In some embodiments, the step of
engineering the NK cells to comprise a skin homing receptor comprises introducing into the cells
one or more vectors comprising the receptor nucleic acid sequence(s), 1'. e., the nucleic acid
sequence(s) encoding the or(s). In specific embodiments, the vector comprises the nucleic
acid sequence for human CCRlO, the nucleic acid sequence for human CLA, or both. In specific
embodiments, the vector comprises the c acid sequence for human CCR4, and optionally
the nucleic acid ce for human CLA. In specific embodiments, the vector comprises the
nucleic acid sequence for human CCR4 and the nucleic acid sequence for human CCRlO, In
specific embodiments, the vector comprises the nucleic acid sequence for human CCRlO, the
nucleic acid sequence for human CCR4, and the nucleic acid sequence for human CLA. In
specific ments, the vector comprises the nucleic acid sequence for human CCR8. In
specific embodiments, the vector comprises the nucleic acid sequence for human CCR8, and
optionally the nucleic acid sequence for human CLA. In specific embodiments, the vector
comprises the nucleic acid sequence for human CCR8 and the nucleic acid sequence for human
CCRlO. In specific ments, the vector comprises the nucleic acid sequence for human
CCR8, the nucleic acid ce for human CCR4, and the nucleic acid sequence for human
CLA. In specific ments, the vector comprises the nucleic acid ce for human
CCR8, the nucleic acid sequence for human CCRlO, and the nucleic acid sequence for human
CLA. In specific embodiments, the vector ses the nucleic acid sequence for human
CCR8, the nucleic acid sequence for human CCR4, and the nucleic acid sequence for human
CCRlO. In specific embodiments, the vector ses the nucleic acid sequence for human
CCR8, the nucleic acid sequence for human CCR4, the nucleic acid for CCRlO, and the c
acid sequence for human CLA.
In certain embodiments, cells, e.g, NK cells, that home to the skin are ted by a
method comprising a step of treating the cells, e.g, NK cells, with a molecule that induces, e.g.,
increases, the expression of one or more skin homing receptors, e.g., CCR4, CCRlO, CCR8, or
CLA. In specific ments, the molecule is Vitamin D. In certain embodiments, the
induction of expression of skin homing receptors is aided by treating the cells, e.g., NK cells,
with IL-12, e.g., contacting the cells with IL-12 in an amount and for a time sufficient to increase
expression of one or more of CCR4, CCR8, CCRlO, or CLA by said cells.
] In certain embodiments, the method for generating the NK cells that comprise one or
more homing receptors that cause a cell comprising the one or more receptors to home to the
skin, comprises a step of ing the cells, which step is carried out in the presence of a
vitamin D metabolite and, optionally, IL-12. In certain embodiments, the method for generating
the NK cells that comprise one or more receptors that that cause a cell comprising the one or
more receptors to home to the gastrointestinal tract, comprises a step of activating the cells,
which step is carried out in the presence of a vitamin D metabolite, and, optionally, IL-12. In
certain embodiments, both the expanding and activating steps are d out in the presence of a
vitamin D metabolite, and, optionally, IL-12. In certain embodiments the vitamin D metabolite
is 1,25(OH)2D3. In a certain embodiment, the step of engineering a NK cell to comprise a skin
homing receptor is performed by any method known to one of skill in the art.
Table l. Exemplary nucleotide and amino acid sequences for human homing
receptors.
GenBank
Accession
Sequence
Number and
Description
N14 001008540.1 tttttt2tCt tCCCtC;agt gggngggca gaggagttag ccaagatgtg aCtttgaaaC
CthagCgtC tcagtgccct ctaa acaaagaatt :tgtaattgg ttctaccaaa
Exemplary nucleic gaagga ;ata m :gaag;CaC aaaa gatggggagg agagttgtag gattCtacat
acid sequence
taattC2Ctt l9 :gCCC2tag cccactaCtt cagaa2ttCC :gaagaaagC aagCCtgaat
encoding human
tggttt2tta mattgc:tta aaaatttttt gggt :aatgctth tgaattggaa
CXCR4 isoform a
gtgaatgtCC m :tCCt2th CtCttttgca gatatacaCt :CagataaCt acaCCgagga
aa:gggtha l9gggaC2atg athcatgaa ggaaCCCtgt :2CCgtgaag aaaathtaa
tt:caa:aaa m th ccaccatcta thca:catc ::Cttaactg gcattgtggg
caatggattg m :CatCCtgg tcatgggtta ccagaagaaa C;gagaagca tgangacaa
gtacaggCtg ;Cag tggCCgaCC; CC;Ct;tgtC a :CanCttC gggC
ag:tga:gcc (Q :ggcaaact ggtactttgg gaact2CCta gcag tccatgtcat
CtacacagtC 951) 0 0 fl. 0 :aca gcagtgtCC; ca:CC;ggCC :;CatcagtC tggaCCgCta
CC;ggccatC l9 :Ccancca ccaacagtca gaggccaagg aagCtgttgg aggt
gg:cta:gtt DLO0LO ('1' 0 :gga tCCCthCC: CC:gC:gaCt gaCt ttgc
caantcagt E)aggcagatg acagatata; CtgtgaCCgC :;Ctacccca atgaCttgtg
gg;ggt;gtg W ttC agcacatca; gg;tggCCtt a;CCthCtg gtattgtcat
Cth Wattgcatta tcatctccaa gC:gtcacaC ggCC accagaagcg
CCtC magaccacag tcatCtha; CC:ggCtttC tgtt tta
C :acat;ggg m :Cagcatcg aCtCCttca; CC:CCtggaa :CatcaagC aagggtgtga
9 ::tgagaac caca agtggatttc ca:CaCCgag CCCtagCtt tCttccaCtg
t :gtCtgaaC cccatCCtCt athtttCC; tggagccaaa :2taaaaCCt Ctgcccagca
CgcathaCC tCtgtgagca gagggtccag CC;CaagatC C;thcaaag gaaagCgagg
tggacattca tCtgtttcca Ctgagtctga gtCttcaagt ::tcactcca gCtaacacag
a :gtaaaaga Ctttttttta tanataaa aaCttttttt :aagttacaC atttt:Caga
tataaaagaC tgaccaatat tgtacagtt ttatthttg :2ggattttt gtCttgtg
tCtttagttt ttgtgaagtt taattgact atttatataa a:tttttttg tttca:at
a :gtgtgtCt aggcaggaCC tgtggccaag ttCttagttg C:gtatgtCt agga
C :gtagaaaa gggaaCtgaa cattccagag Cgtgtagtga a;Cantaaa gCtagaaa;g
a :Ccccagct gtttatgcat agataatCtC tccattCCCg tggaacgttt ttcctgttct
taagantga tttthtgta gaagatggca Cttataacca aagcccaaag tggta:agaa
a :gCtggttt ttcagttttC aggagtgggt tgatttcagC aCCtacagtg tacag;Ct
tattaagttg ttaataaaag tacatgttaa acttaaaaaa aaaaaaaaaa aa
DEW 0034672 aacttcagtt tgttggCth ggcagcaggt agcaaagtga CgCCgagggC Ctgag;gC
ccac Cgcatctgga gaaccagcgg ttaccatgga ggggatcagt atatacac
EXGHHflaU/nudsm cagataaCta ggaa atgggthag gggaCtatga thcatgaag gaaCCCtg
acid sequence
tCCgtgaaga aaathtaat ttcaataaaa tCttCCthC caccatCtaC tccatcatCt
encoding human
tCttaaCtgg cattgtgggc aatggattgg tcatCCtggt catgggttac cagaagaaac
CXCR4 isoform b
tgagaagcat gangacaag tacaggCth aCCtgtcagt ggCCgaCCtC gtca
tcanCttCC ggca gttgathCg tggcaaaCtg gtaCtttggg aaCttCCtat
gcaaggcagt ccatgtcatc tacacagtca acctctacag cagtgtCCtC gcct
tcatcagtCt CtaC Ctggccath tCCanccaC caacagtcag aggccaagga
GenBank
Accession
Number and Sequence
Description
agctgttggc ggtg gtctatgttg gcgtctggat ccctgccc acta
:tcccgactt catctttgcc aacgtcagtg aggcagatga cagatata tgtgaccgc;
:ctaccccaa tgacttgtgg gtggttgtgt tccagtttca gcacatca gttggcctta
:cctgcctgg tattgtcatc ctgtcctgct attgcattat catctccaag cac:
gcca ccagaagcgc aaggccctca agaccacagt catcctca;c Ctggctttc;
:cgcctgttg gctgccttac :acattggga tcagcatcga thcttca;c ctcctggaaa
:catcaagca agggtgtgag :ttgagaaca ctgtgcacaa gtggatttcc atcaccgagg
ccctagcttt cttccactgt aacc ccatcctcta tgctttcc:t ggagccaaa;
:taaaacctc tgcccagcac gcactcacct ctgtgagcag agggtccagc ctcaagatcc
:ctccaaagg aggt ggacattcat ctgtttccac tgagtctgag agt
:tcactccag ctaacacaga :gtaaaagac ttttttttat acgataaa:a acttttttt
aagttacaca tttttcagat ataaaagact tatt gtacagtt;t tattgcttg
tttg tcttgtgttt Ctttagtttt tgtgaagttt aattgact:a tttatataaa
:tttttttgt ttcatattga :gtgtgtcta ggcaggacct aagt tcttagttgc
:gtatgtctc gtggtaggac :gtagaaaag ggaactgaac attccagagc gtgtagtgaa
:cacgtaaag ctagaaatga :Ccccagctg tttatgcata gataatctct ccattcccgt
tttt tcctgttctt aagacgtgat tttgctgtag aagatggcac ttataaccaa
agcccaaagt gaaa :gctggtttt tcagttttca ggagtgggtt gatttcagca
gtgt acagtcttgt attaagttgt taataaaagt acatgttaaa cttaaaaaaa
aaaaaaaaaa a
NP_001008540.1 msiplpllqi ytsdnyteem gsgdydsmke pcfreenanf tiys iifltgivgn
glvilvmqu kklrsmtdky rlhlsvadll fvitlpfwav davanwyfgn flckavhviy
Exemplary amino tvnlyssvli lafisldryl aivhatnsqr ekvv yvngipall ltipdfifan
acid sequence for
vseaddryic drfypndlwv vqufqhimv glilpgivil scyciiiskl shskghqkrk
human CXCR4
alkttvilil affacwlpyy igisidsfil leiikqgcef entvhkwisi tealaffhcc
isoform a
lnpilyaflg akfktsaqha gssl kilskgkrgg eses ssfhss
NP_003458.1 megisiytsd nyteemgsgd ydsmkepcfr eenanfnkif lptiysiifl tgivgnglvi
lvmqukklr smtdkyrlhl svadllfvit dava flc< avhviytvnl
Exemplary amino yssvlilafi sldrylaivh atnsqrprkl yvgv wipallltip dfifanvsea
acid sequence for
ddryicdrfy pndlwvvqu fqhimvglil scyc iiisklshs< ghqkrkalkt
human CXCR4
tvililaffa cwlpyyigis idsfilleii kqgcefentv hkwisiteal affhcclnpi
isoform b
lyaflgakfk tsaqhaltsv srgsslkils kgkrgghssv ssfn SS
301714.1 cacttcctcc ccagacaggg gtagtgcgag gccgggcaca gccttcc gtggtt2tac
cgcccagaga gcgtcatgga cctgggtatg cctgtgtcaa gatgagg cggacgatta
ary nucleic ca:cggagac aacaccacag tggactacac tttgt :cgag tctttgtgc ccaagaagga
acid sequence
cg;gcggaac gcct ggttcctccc tatca :gtac tccatca;t gtttcg;ggg
ng human
cc:actgggc ctgg tcgtgttgac ctata :ctat ttcaagaggc tcaagaccat
CCR'7 isoform b
gaccgatacc tacctgctca acctggcggt ggcagacatc ctcttcc tgacccztcc
Ct;ctgggcc tacagcgcgg ccaagtcctg ggtct :ngt gtccact gcaagc;cat
ct:tgccatc tacaagatga gcttcttcag tggca :gctc ctacttc : gcatcagcat
tgaccgctac gtggccatcg tccaggctgt ctcagctcac cgccaccgtg cccgcg:cct
tc;catcagc aagctgtcct gtgtgggcat ctgga :acta gccacag:gc tctcca;ccc
agagctcctg tacagtgacc tccagaggag cagcagtgag caagcga:gc gatgctctct
ca:cacagag catgtggagg cctttatcac catccaggtg gcccaga:gg tgatcggctt
tc;ggtcccc Ctgctggcca tgagcttctg ttacc :tgtc atcatccgca ccctgc;cca
GenBank
Accession
Number and Sequence
Description
ggcacgcaac tttgagcgca acaaggccat caaggtgatc atcgctgtgg tcgtggtctt
catagtcttc cagctgccct gggt ggtcctggcc cagacggtgg ccaacttcaa
catcaccagt agcacctgtg agctcagtaa gcaactcaac atcgcctacg acgtcaccta
cagcctggcc cgct gctgcgtcaa ccctttcttg tacgccttca tcggcgtcaa
gttccgcaac gatctcttca agctcttcaa ggacctgggc tgcctcagcc aggagcagct
ccggcagtgg tcttcctgtc tccg gcgctcctcc atgagtgtgg aggccgagac
caccaccacc ttctccccat ctct tctgcctgga ctagagggac ctctcccagg
gtccctgggg tggggatagg gagcagatgc aatgactcag gacatccccc cgccaaaagc
tgctcaggga aaagcagctc tcccctcaga gtgcaagccc Ctgctccaga agatagcttc
accccaa:cc cagctacctc aaccaatgcc aaaaaaagac agggctgata agctaacacc
acaa cactgggaaa cagaggctat tgtcccctaa accaaaaact gaaagtgaaa
aaac tgttcccacc tgctggagtg aaggggccaa ggagggtgag tgcaaggggc
gzgg cctgaagagt cctctgaatg aaccttctgg cctcccacag actcaaatgc
tcagaccagc tcttccgaaa accaggcctt aaga atag tggggagact
tcttggC2tg aaaa gcggacatca gctggtcaaa caaactctct gaacccctcc
thcatcgtt ttcttcactg tcctccaagc cagcgggaat ggcagctgcc acgccgccct
aaaagcacac tcatcccctc acttgccgcg tcgccctccc aggctctcaa caggggagag
tgtggtg;tt cctgcaggcc aggccagctg cctccgcgtg atcaaagcca cactctgggc
tccagag:gg ggatgacatg gctc ttggctccac tgggatggga ggagaggaca
agggaaa;gt caggggcggg gagggtgaca gtggccgccc aaggcccacg ttct
ttgttct2tg tcacagggac tgaaaacctc tcctcatgtt Ctgctttcga ttcgttaaga
gagcaacatt ttacccacac acagataaag ttttcccttg aggaaacaac agctttaaaa
gaaaaagaaa aaaaaagtct ttggtaaatg gcaaaaaaaa aaaaaaaaaa aaaaaaa
N14_001301716J ctctagatga gtcagtggag ggcggg:gga gcgttgaacc agtg tggttgggcg
taaacgtgga cttaaactca ggagctaagg ggtaattcag tgaaaaaggg gaatgagcgg
ExenqflaU’HUdem tggggagctc tgttgcaaca ggg;ccaatc gcagcaggac tacaaatgcc Cgagcgcagg
acid sequence
ctgggaacga ggggacagcg gctgcc:gtc cccagaatag aaaatgcagc taggaagccc
encoding human
tc:ttgagtg gacagcggag gac2ggactg ccaggccaag catcaggggc ctca
CCR7 isoform c
gtta gagcccctga gga2ttagga ggaagggaaa ccaatgaaaa gcgtgc;ggt
precursor
gg:ggctctc cttgtcattt tccagg:atg cctgtgtcaa gatgagg:ca cggacgatta
ca:cggagac aacaccacag tggactacac tttgt:cgag tgct ccaagaagga
Cg;gcggaac gcct ggt;cc;ccc tatca;gtac a2tt gtttcg;ggg
cc:actgggc aatgggctgg tcg:gt:gac ctata;ctat ttcaagaggc tcaagaccat
gaccgatacc tacctgctca cggt ggcagacatc ctcttcc:cc ztcc
Ct;ctgggcc tacagcgcgg ccaagtcctg ggtct2ngt gtccact2tt gcaagc;cat
ct:tgccatc tacaagatga gct:ct:cag gctc c:tt gcatcagcat
tgaccgctac atcg tccaggctgt ctcagctcac cgccaccgtg cccgcgzcct
tc;catcagc aagctgtcct gtg;gggcat ctgga2acta gccacag;gc tctcca;ccc
agagctcctg tacagtgacc tccagaggag cagcagtgag caagcga:gc gatgctctct
ca:cacagag catgtggagg cct:tatcac catccaggtg gcccaga:gg tgatcggctt
tc;ggtcccc gcca tgagcttctg ttacc;tgtc atcatccgca ccctgc;cca
ggcacgcaac tttgagcgca acaaggccat caagg;gatc atcgctg:gg tcgtgg;ctt
ca:agtcttc cagctgccct acaatggggt ggtcc:ggcc g:gg ccaact:caa
ca;caccagt agcacctgtg agctcagtaa gcaac;caac atcgcctacg acgtcaccta
ggcc tgcgtccgct gctgcgtcaa ccctt2cttg tacgcct;ca tcggcg;caa
gt:ccgcaac ttca agctcttcaa ggacc:gggc tgcctcagcc aggagcagct
ccggcagtgg tcttcctgtc ggcacatccg gcgctcctcc atgagtg:gg aggccgagac
GenBank
Accession
Nnnflmrand Sequence
Description
caccaccacc ttctccccat aggcgactct tctgcctgga ctagagggac ctctcccagg
gtccctgggg tggggatagg gagcagatgc aatgactcag gacatccccc cgccaaaagc
tgctcaggga aaagcagctc tcccctcaga gtgcaagccc caga agatagcttc
accccaa2cc cagctacctc aaccaatgcc aaaaaaagac agggctgata agctaacacc
agacagacaa cactgggaaa ctat tgtcccctaa accaaaaact gaaagtgaaa
gtccagaaac tgttcccacc tgctggagtg aaggggccaa ggagggtgag tgcaaggggc
gtgggag:gg cctgaagagt cctctgaatg aaccttctgg cctcccacag actcaaatgc
tcagaccagc tcttccgaaa cctt atctccaaga ccagagatag tggggagact
tcttggC2tg gtgaggaaaa gcggacatca gctggtcaaa caaactctct gaacccctcc
thcatcgtt ttcttcactg tcctccaagc cagcgggaat ggcagctgcc acgccgccct
aaaagcacac tcatcccctc acttgccgcg tcgccctccc tcaa caggggagag
tgtggtg;tt cctgcaggcc gctg cctccgcgtg atcaaagcca cactctgggc
gzgg ggatgacatg cactcagctc ccac tgggatggga ggagaggaca
agggaaa;gt caggggcggg gagggtgaca gtggccgccc aaggcccacg agcttgttct
ttgttct2tg tcacagggac tgaaaacctc tcctcatgtt Ctgctttcga ttcgttaaga
gagcaacatt ttacccacac acagataaag ttttcccttg aggaaacaac agctttaaaa
gaaaaagaaa aaaaaagtct ttggtaaatg gcaaaaaaaa aaaaaaaaaa aaaaaaa
1301717J thtagatga gtcagtggag ggcgggtgga gcgttgaacc gtgaagagtg tggttgggcg
:gga cttaaactca ggagctaagg gggaaaccaa tgaaaagcgt gctggtgg
Exemplary nucleic gctctccttg tcattttcca cctg tgtcaagatg agg :cacgga Cgattaca
acid sequence
aaca ccacagtgga ctacactttg ttcgagtctt tgtgctccaa gaaggacg
encoding human
ngaac:tta aagcctggtt cctccctatc atgtactcca tca :ttgttt cgtgggcc
CCR7 isoform c
Ctgggcaatg ggctggtcgt gttgacctat ttca agaggctcaa gaccatgacc
precursor
gatacc:acc tgctcaacct ggcggtggca gaca :cctct tcc :cctgac ccttccct
:aca gcgcggccaa gtcctgggtc ttcggtgtcc act :ttgcaa gctcatct
gccatc;aca gctt Cttcagtggc atgc :Cctac ttc :ttgcat cagcattgac
cgctacgtgg ccatcgtcca ggctgtctca gctcaccgcc cccg cgtccttc 2C
atcagcaagc tgtcctgtgt gggcatctgg atac :agcca cag :gctctc catcccagag
thctg;aca gtgacctcca gaggagcagc agtgagcaag cga :gcgatg thtctca
acagagcatg tggaggcctt tatcaccatc cagg :ggccc aga :ggtgat cggctttc :9
gtccccctgc tggccatgag Cttctgttac cttg :Catca ccct gctccaggca
Cgcaac;ttg agcgcaacaa ggccatcaag gtga :Catcg Ctg t ggtcttca :a
gtcttccagc tgccctacaa tggggtggtc ctggcccaga C99 :ggccaa cttcaaca :C
accagtagca agct cagtaagcaa ctcaacatcg cctacgacgt cacctacagc
Ctggcc;gcg tccgctgctg Cgtcaaccct ttct :gtacg cct :catcgg Cgtcaagt 2C
cgcaacgatc tcttcaagct cttcaaggac ctgggctgcc tcagccagga gcagctccgg
cagtgg:ctt cctgtcggca catccggcgc tcctccatga gtg :ggaggc cgagaccacc
accacc;tct ccccataggc gactcttctg cctggactag ctct cccagggtcc
:ggg gagc agatgcaatg actcaggaca tccccccgcc aaaagctgct
cagggaaaag cagctctccc tgc aagcccctgc tccagaagat agcttcaccc
cagc tacctcaacc aatgccaaaa aaagacaggg Ctgataagct agac
agacaacact gggaaacaga ggctattgtc ccctaaacca aaaactgaaa gtgaaagtcc
agaaactgtt cccacctgct ggagtgaagg ggccaaggag ggtgagtgca aggggcgtgg
cctg aagagtcctc tgaatgaacc ttctggcctc ccacagactc aaatgctcag
accagctctt ccgaaaacca ggccttatct ccaagaccag agatagtggg gagacttctt
ggcttggtga ggaaaagcgg acatcagctg gtcaaacaaa ctctctgaac ccctccctcc
atcgttttct tcactgtcct ccaagccagc gggaatggca gctgccacgc Cgccctaaaa
GenBank
Accession
Number and Sequence
Description
gcacactcat CCCthactt gCCgcgthC CthccaggC tthaacagg ggagagtgtg
gtgtttCCtg caggccaggC cagCthCtC CgCg;gatca aagccacaCt :gggthca
gagtggggat gacatgcact cagCtCttgg thcaCtggg atgggaggag ggacaaggg
aaatgtcagg ggcggggagg gtgacagtgg CCgcccaagg cccacgagct gttctttgt
tCtttgtcaC agggaCtgaa aaCCtCtCCt catg;tCth th :aagagagc
aacattttac ccacacacag ataaagtttt CCCt;gagga aacaacagCt :aaaagaaa
aagaaaaaaa aag:ctttgg taaatggcaa aaaaaaaaaa aaaaaaaaaa aa
pflw:0013017181 aggagaaggt aaca can catt;CCtgg CgC;attgag :tggagCtg
ccaagggCCt gccztcactt gtggcathC agttaCtgaC tthcagtgg ccaggCCCt
ExenqflaU7HUd€m Ctgg gaCCtgaggg tan ggaagagggC taC;gCCgCC gta
acid ce
gggaaaccaa tgaaaagcgt gC;ggtgg gCtC;CCttg tca2tttcca gtathCtg
encoding human
tgtcaagatg aggzcacgga Cgattaca ggagacaaca ccacagtgga :acaCtttg
CCR7 m c
t :CgagtCtt tgthtccaa gaaggan ngaaC2tta ggtt CtCCCtatC
precursor
a ca tca2ttgttt Cg;gggCC Ctgggcaatg ggC;ggtht
a :Ctatttca agaggctcaa gaccatgaCC gataCC:aCC th:CaaCCt
gacatCCtCt tCC;CCtgaC CC;tCCCt;C tgggCC2aca caa
t :ngtgtCC aCt;ttgcaa gC;CatCt;t gccatC2aca aga;gagCtt OLQLQLQOOLQQLQO :tgaCCtatgcggtggca:CCtgggtC:tcagtggc
a :gctCCtaC ttC:ttgcat cagcattgac Cgctantgg cca:cgtcca ggctgtctca
gthaCCgCC aCCgthCCg Cg;CCttC;C atcagcaagC tgtCCtgtgt gggcatCtgg
a :aCtagcca cag;gCtCtC ca;Cccagag CtCCtg;aca gtgaCthca gaggagcagc
agtgagcaag Cga:gCgatg Ctthtca:C acagagcatg cctt catc
CaggtggCCC aga:ggtgat ngCtttC;g gtCCCCCth tggccatgag CttCtgttaC
C :tgtcatca tCCgcaCCCt ggca CgcaaC2ttg agCgcaacaa ggccatcaag
9 :gatcatcg ctg:ggtcgt gg:cttca:a gtCttccagC thCCtacaa ggtc
C aga ng:ggccaa Ct;Caaca:C accagtagca CCtgtgagCt cagtaagcaa
C :Caacath CCtanant caCCtacagC CtggCC;gCg tCCgCthtg CgtcaaCCCt
t :Cttgtan tcgg Cg:Caagt:C Cgcaacgatc tCttcaagCt Cttcaaggac
C :gggCthC tcagccagga gcagCtCng cagtgg;Ctt CCtgthgca CgC
tCthcatga gtg;ggaggC CgagaccaCC accaCC2tCt aggC gaCtCttCtg
CCtggaCtag agggaCCtCt cccagggtCC Ctgggg:ggg gatagggagc agatgcaatg
athaggaca tCCCCCCgCC aaaagCtht cagggaaaag tCCC tgc
aagCCCCth tccagaagat agCttcaCCC caa;CccagC taCthaaCC aatgccaaaa
aaagacaggg ctgataagct aacaccagac agacaacact caga ggctattgtc
CCCtaaacca aaaaCtgaaa gtgaaagtCC agaaaCtgtt cccaCCtht ggagtgaagg
ggccaaggag ggtgagtgca aggggCgtgg gag;ggCCtg aagagtCCtC tgaatgaaCC
ttctggCCtC ccacagactc aaatgctcag accagCtCtt CCgaaaacca ggccttatct
ccaagaccag agatagtggg gagacttCtt ggC:tggtga ggaaaagng acatcagctg
gtcaaacaaa gaaC CCCtCCCtCC athttttCt tcaCtgtCCt ccaagccagc
gggaatggca gCtgccach Cgccctaaaa gcacathat CCCthaCtt gccgcgtcgc
CthccaggC tthaacagg ggagagtgtg gtg:ttCCtg caggccaggC cagCthCtC
CgCgtgatca aagccacact hca ggat caCt cagCtCttgg
thcactggg atgggaggag aggacaaggg aaa;gtcagg agg gtgacagtgg
CCgcccaagg cccanagCt tgttCtttgt tCt:tgtcaC agggactgaa aaCCtCtCCt
catgttCth ttthatth ttaagagagC aacattttac ccacacacag ataaagtttt
CCCttgagga aacaacagct ttaaaagaaa aagaaaaaaa aagtctttgg taaatggcaa
aaaaaaaaaa aaaaaaaaaa aaa
GenBank
Accession
Number and Sequence
Description
N14 0018383 cacttcctcc ccagacaggg gtagtgcgag gccgggcaca gccttcctgt gtggttttac
Cgcccagaga gcg;catgga cctggggaaa ccaatgaaaa tggt ggtggctctc
aU7HUd€m cttgtcattt tccaggtatg cctgtgtcaa gatgagg;ca ngacgatta catcggagac
acid sequence
acag tggactacac tttgttcgag tctttgtgct ccaagaagga cgtgcggaac
ng human
:ttaaagcct ggt;cctccc tatcatgtac tccatca2tt gtttcgtggg cctactgggc
CCR7 isoform a
aatgggctgg tcg;gttgac Ctatatctat ttcaagaggc tcaagaccat gaccgatacc
precursor
:acctgctca acczggcggt ggcagaca:c thttcc:cc tgacccttcc ggcc
:acagcgcgg ccaagtcctg ggtcttcggt gtccact2tt gcaagctcat catc
:acaagatga gct;cttcag tggcatgc;c ctacttc;tt gcatcagcat tgaccgctac
gtggccatcg tccaggctgt ctcagctcac cgccaccgtg cccgcgtcct tctcatcagc
aagctgtcct gtg;gggcat Ctggatacza gccacag;gc tctccatccc agagctcctg
:acagtgacc tccagaggag cagcagtgag caagcga;gc gatgctctct catcacagag
catgtggagg cctztatcac catccaggzg gcccaga:gg gctt tctggtcccc
Ctgctggcca tgagcttctg ttaccttg atcatccgca ccctgctcca caac
:ttgagcgca acaaggccat caaggtga;c atcgctg;gg tcgtggtctt catagtcttc
cagctgccct acaatggggt ggtcctggcc cagacgg:gg ccaacttcaa catcaccagt
agcacctgtg agctcagtaa gcaactcaac atcgcctacg acgtcaccta cagcctggcc
:gcgtccgct gctgcgtcaa ccctttctzg tacgcct2ca tcggcgtcaa gttccgcaac
gatctcttca agctcttcaa ggacctgggc tgcctcagcc aggagcagct gtgg
:cttcctgtc ggcacatccg gcgctcctcc atgagtg;gg agac cacc
:tctccccat aggcgactct tctgcctgga ctagagggac thtcccagg gtccctgggg
:ggggatagg gagcagatgc aatgactcag gacatccccc aagc tgctcaggga
aaagcagctc tcccctcaga gtgcaagccc ctgctccaga agatagcttc accccaa2cc
cagctacctc aaccaatgcc agac agggctgata agctaacacc agacagacaa
cactgggaaa cagaggctat tgtcccctaa accaaaaact gaaa aaac
tgttcccacc tgctggagtg aaggggccaa ggagggtgag tgcaaggggc gtgggag;gg
cctgaagagt cctctgaatg ctgg cctcccacag actcaaatgc tcagaccagc
tcttccgaaa cctt atctccaaga ccagagatag tggggagact tcttggc:tg
gtgaggaaaa gcggacatca gctggtcaaa caaactctct gaacccctcc ctccatcgtt
ttcttcactg tcctccaagc cagcgggaat ggcagctgcc acgccgccct aaaagcacac
tcatcccctc acttgccgcg tcgccctccc aggctctcaa caggggagag tgtggtg:tt
cctgcaggcc aggccagctg cctccgcgtg atcaaagcca gggc tccagag;gg
catg cactcagctc ttggctccac tgggatggga ggagaggaca agggaaa;gt
caggggcggg gagggtgaca gtggccgccc aaggcccacg agc ttgttct2tg
tcacagggac tgaaaacctc tcctcatgtt ctgctttcga gagcaacatt
ttacccacac acagataaag ttttcccttg aggaaacaac gaaaaagaaa
aaaaaagtct ttggtaaatg gcaaaaaaaa aaaaaaaaaa
NP 0012886431 mysiicfvgl lgnglvvlty iyfkrlktmt dtyllnlava waysaakswv
fgvhfcklif aiykmsffsg mllllcisid ryvaivqavs isklscvgiw
ao’anfino sipe qrss seqamrcsli tehveafiti ' vpllamsfcy
acid sequence for
lviirtllqa rnfernkaik viiavvvvfi qulpyngvv ' tsstcelskq
human CCR7
lniaydvtys cvnp flyafigka rndlfklfkd lgclsqeqlr hirr
isoform b
ssmsveaett ttfsp
NP 0012886451 mksvlvvall Vifqvclch igdn ttvdytlfes vrnf kawflpimys
iicfvgllgn glvvltyiyf krlktmtdty llnlavadil fway saakswvfgv
ExenqflaU’aHflHO hfcklifaiy kmsffsgmll llcisidryv aivqavsahr hrarvllisk lscvgiwila
WO 09668
GenBank
Accession
Number and Sequence
Description
acid sequence for tvlsipelly sdlqrssseq amrcsliteh qmvigflvpl lamsfcylvi
human CCR7 irtllqarnf ernkaikvii avvvvfiqu tvanfnitss tcelskqlni
m 0 aydvtyslac vrccvnpfly afigkarnd lsqeqquws scrhirrssm
precursor sveaettttf Sp
NP_001288646.1 mksvlvvall Vifqvclch evtddyigdn ttvdy21fes lcskkdvrnf kawflpimys
iicfvgllgn glvvltyiyf krlktmtdty llnlavadil flltlpfway saakswvfgv
Exemplary amino hfcklifaiy kmsffsgmll dryv sahr lisk lscvgiwila
acid sequence for
tvlsipelly sdlqrssseq amrcsliteh veafi2iqva qmvigflvpl lamsfcylvi
human CCR7
irtllqarnf ernkaikvii avvvvfiqu lpyngvvlaq itss tcelskqlni
isoform c
aydvtyslac vrccvnpfly rnd lfklf<dlgc lsqeqquws scrhirrssm
precursor
sveaettttf SP
NP_001288647.1 mksvlvvall vifqvclch evtddyigdn 1fes lcskkdvrnf kawflpimys
llgn yiyf krlktmtdty llnlavadil flltlpfway saakswvfgv
Exemplary amino hfcklifaiy kmsffsgmll llcisidryv aivqavsahr hrarvllisk lscvgiwila
acid sequence for
tvlsipelly sdlqrssseq amrcsliteh iqva qmvigflvpl lamsfcylvi
human CCR7
irtllqarnf ernkaikvii avvvvfiqu vlaq tvanfnitss tcelskqlni
isoform c
slac vrccvnpfly afigkarnd dlgc lsqeqquws scrhirrssm
precursor
sveaettttf Sp
NP_001829. 1 mdlgkpmksv lvvallvifq vclchevtd dyigdnttvd ytlfeslcsk kdvrnfkawf
lpimysiicf vgllgnglvv ltyiyfkrlk tmtdtyllnl avadilfllt lpfwaysaak
Exemplary amino hfck lifaiykmsf fsgmllllci sidryvaivq avsahrhrar vllisklscv
acid sequence for
giwilatvls ipellysdlq rssseqamrc slitehveaf itiqvaqmvi gflvpllams
human CCR7
fcylviirtl lqarnfernk aikviiavvv vfiqulpyn gvvlaqtvan fnitsstcel
isoform a
skqlniaydv tyslacvrcc vnpflyafig karndlfkl fkdlgclsqe qquwsscrh
precursor
irrssmsvea ettttfsp
NM_002253 .2 actgagtccc gggaccccgg gagagcggtc aatgtgtggt gttt cctctgcctg
Cgccgggcat cacttgcgcg ccgcagaaag tccgtctggc agcctggata tcctctccta
Exemplary nucleic ccggcacccg cagacgcccc tgcagccgcg gtcggcgccc gggctcccta gccctgtgcg
acid sequence
gtc Ctgcgc;gcg gggtgccgcg agttccacct ccgcgcctcc ttctctagac
encoding human
aggcgctggg agaaagaacc ggctcccgag ttctgggcat ttcgcccggc tcgaggtgca
VEGFRZ
ggatgcagag caaggtgctg Ctggccgtcg ccctgtggct ctgcgtggag acccgggccg
precursor
cctctgtggg tttgcczag gtttctcttg atctgcccag gctcagcata caaaaagaca
tacttacaat taaggc:aa acaactcttc aaattacttg caggggacag agggacttgg
tttg gcccaa:aa cagagtggca gtgagcaaag ggtggaggtg actgagtgca
gcgatggcct Cttctg;aag acactcacaa ttccaaaagt gatcggaaat gacactggag
cctacaagtg cttctaccgg gaaactgact tggcctcggt catttatgtc tatgttcaag
attacagatc tccatt:at: gcttctgtta gtgaccaaca tggagtcgtg tacattactg
agaacaaaaa caaaac;gtg gtgattccat gtctcgggtc aaat thaacgtgt
cactttgtgc aagataccca agat ttgttcctga tggtaacaga atttcctggg
acagcaagaa :ac: attcccagct acatgatcag ctatgctggc atggtcttct
caaa ;ga; gaaagttacc agtctattat gtacatagtt gtcgttgtag
ggtataggat ttatga;gtg gttctgagtc cgtctcatgg aattgaacta tctgttggag
aaaagcttgt Cttaaa:tg: acagcaagaa taaa gatt gacttcaact
gggaataccc ttcttcgaag catcagcata ttgt aaaccgagac Ctaaaaaccc
GenBank
Accession
Number and Sequence
ption
agtctgggag tgagatgaag aaatttttga gcaccttaac tatagatggt gtaacccgga
gtgaccaagg attg :acacc t9 :gcagcat ccagtgggct gatgaccaag aagaacagca
catttgtcag ggtccatgaa tttg ttgcttttgg aagtggcatg gaatctctgg
tggaagccac ggtgggggag cg :gtcagaa tccctgcgaa gtaccttggt tacccacccc
cagaaataaa atgg :ataaa aa ac cccttgagtc caatcacaca attaaagcgg
ggcatgtact gacgattatg gaagtgagtg aaagagacac aggaaattac actgtcatcc
ttaccaatcc catt :caaag gagaagcaga gccatgtggt ctctctggtt gtgtatgtcc
agat tggtgagaaa tc :ctaatct ctcctgtgga :tcctaccag tacggcacca
thaaacgct gaca :gtacg gtctatgcca ttcctccccc gcatcacatc cactggtatt
ggcagttgga gtgc gccaacgagc ccagccaagc :gtctcagtg acaaacccat
acccttgtga agaa :ggaga ag :gtggagg acttccaggg aggaaataaa attgaagtta
ataaaaatca atttgctcta at :gaaggaa aaaacaaaac :gtaagtacc cttgttatcc
aagcggcaaa tgtg :cagct ttgtacaaat gtgaagcggt caacaaagtc gggagaggag
agaggg2gat ctcc :tccac gtgaccaggg gtcctgaaat :actttgcaa cctgacatgc
agcccactga gcaggagagc gtgtctttgt ggtgcactgc agacagatct acgtttgaga
catg gtacaagctt 99cccacagc ctctgccaat ccatgtggga gagttgccca
cacctg:ttg caagaacttg gatactcttt ggaaattgaa :gccaccatg aata
gcacaaatga cattttgatc atggagctta agaatgcatc Cttgcaggac caaggagact
atgtctgcct tgctcaagac aggaagacca agaaaagaca :tgcgtggtc aggcagctca
cagtcc:aga ggca cccacgatca caggaaacct ggagaatcag acgacaagta
ttggggaaag catcgaagtc tcatgcacgg ggaa :Ccccctcca cagatcatgt
ggtttaaaga taatgagacc Cttgtagaag actcaggcat :g:attgaag gatgggaacc
ggaacc:cac tatccgcaga gtgaggaagg aggacgaagg cc;ctacacc tgccaggcat
gcagtg;tct tggctgtgca aaagtggagg catttttcat aa;agaaggt gcccaggaaa
agacgaactt ggaaatcatt attctagtag gcacggcggt ga:tgccatg tggc
tacttc:tgt catcatccta cggaccgtta agcgggccaa tggaggggaa ctgaagacag
;gtc catcgtcatg gatccagatg aactcccatt ggatgaacat tgtgaacgac
tgccttatga tgccagcaaa tgggaattcc ccagagaccg gc:gaagcta ggtaagcctc
ttggccgtgg tgcctttggc caagtgattg aagcaga2gc ct;tggaatt acag
caacttgcag gacagtagca gtcaaaatgt tgaaagaagg agcaacacac agtgagcatc
gagctctcat gtctgaactc ctca ttcatat:gg tcaccatctc aatg:ggtca
accttctagg tgcctgtacc aagccaggag ggccactcat tgtg tgca
aatttggaaa cact agga gaaa tgaatttgtc ccctacaaga
ccaaaggggc acgattccgt caagggaaag actacgt:gg agcaatccc: gtggatctga
aacggcgctt ggacagcatc accagtagcc agagctcagc cagctctgga tttgzggagg
agaagtccct cagtgatgta gagg aagctcc;ga agatctgta; aaggacttcc
tgga gcatctcatc tg :tacagct tccaagtggc :aagggcatg gagt:cttgg
catcgcgaaa gtgtatccac agggacctgg cggcacgaaa :atcctctta tcggagaaga
acgtggttaa tgac tt :ggcttgg cccggga2at :tataaaga; ccagattatg
tcagaaaagg agatgctcgc ctccctttga tggc cccagaaaca attt:tgaca
gagtgtacac aatccagagt gacgtctggt g:gt :ttgctgtgg gaaa2atttt
ccttaggtgc ttctccatat cc :ggggtaa agattga2ga agaattttg; aggcgattga
aagaaggaac tagaatgagg gcccctgatt atactacacc agaaatgtac cagaccatgc
tggactgctg gcacggggag cccagtcaga gacccacgtt :tcagagttg gtggaacatt
tgggaaatct Cttgcaagct aa :gctcagc aggatggcaa agactacat; gttcttccga
tatcagagac tttgagcatg gaagaggatt ctggactctc :ctgcctacc tcacctgttt
tgga ggaggaggaa gtatgtgacc tcca :tatgacaac ggaa
tcagtcagta tctgcagaac ag aa agagccggcc :gtgagtgta aaaacatttg
GenBank
Accession
Nnnflmrand Sequence
Description
aaga:atCCC gttagaagaa ccagaagtaa aagtaa:CCC agatgacaac cagacggaca
gtggzatggt tCtththa gaagagCtga ;gga aaCC aaattatCtC
catC;tttgg tggaatggtg aaaa gcagggagtc tgtggcatCt gaaggthaa
accagacaag ngCtaccag tCngatatC aCtCCga:ga caCC aCCgtgtaCt
ccag:gagga agcagaactt ttaaagCtga :agaga;;gg agtgcaaaCC ggtagcacag
cccagattCt ccagCCtgaC thgggacca caCtgagCtC tCCtCCtgtt taaaaggaag
catccacaCC cccaactcct ggacatcaca :gagagg:gc thtcagatt ttcaagtgtt
gttC2ttcca ccagcaggaa gtagCCgcat :tgatt;;Ca aaC agaaaaagga
CCthgaCtg cagggagcca gtCttCtagg catatCC;gg aagaggCttg tgacccaaga
atgtgtCtgt tCCC agtgttgaCC :gatCC:Ctt tttcattcat ttaaaaagca
ttta2Cath CCCCthth gggtctcaCC atgggt22ag aacaaagan ttcaagaaat
ggccccatCC tcaaagaagt agcagtaCCt ggggagC2ga caCttctgta aaaCtagaag
ataaaccagg caatgtaagt gtthaggtg :tgaaga:gg gaaggat:tg cagggCtgag
tCta:Ccaag aggCtttgtt taggantgg gtcccaagCC aagCCttaag tgtggaa2tC
ggat;gatag aaaggaagac taanttaCC :thtttgga gagtactgga gCCtgcaaat
gcat:gtgtt thtCtggtg gaggtgggca :ggggtc:gt tctgaaa:gt aaagggt:ca
gangggttt ttag aaggtthgt gttCtthag ttgggctaaa gtagagt2Cg
t :gthtgtt tCtgaCtCCt aa;gagagtt CCttccagaC Cgttan;gt CtCCtggcca
agccccagga aggaaatgat ctgg CtCCttg:Ct cccaggc:ga :Ccttta::c
agaataccac aaagaaagga gCtC aaggCtCCCt gCCg;gt:ga agagttC;ga
C :gcacaaaC cagCt2Ctgg tt;CttCtgg aatgaataCC tha2atCtg :CCtgatg
a tga gaCtgaath gggaggttca atgtgaagct gtgtgtggtg :Caaagt-
aggaaggatt ttaCCCtttt gt;CttCCCC Ctgtccccaa cccaCtC2Ca CCCCgcaa
Catcagtatt ttagt2attt ggCCtCtaCt ccagtaaaCC tgat;gggtt :gttcaC
C :gaatgatt attagccaga aatt attttatagc ccaaattata acatCta
tattatttag aCttt2aaca ta;agagCta tttCtaCtga tttt;gCCCt :gttCtg
t :tttttcaa aaaagaaaat gtgttttttg tttggtacca gaaa :gCtgggaaC
aatgaCtata agaca:gcta tggcacatat atttatagtc tgtt:atgta gaaacaaa
taatatatta aagCC2tata ta2aatgaaC tttgtaCtat tcacattttg :atcagta
a :gtagcata acaaaggtca taathtttC agcaattgat gtca2tttat acat
tgaaaaactt gaaggaatCC Ct:tgcaagg ttgcattact gtacccatca :ttctaaaat
ggaagagggg gtggC;gggC acagtggCCg acaCCtaaaa acccagcaCt :tggggggCC
aaggtgggag gathCttga gcccaggagt ccag tCtggccaaC atggtcagat
tccatctcaa agaaaaaagg taaaaataaa ataaaatgga gaagaaggaa :caga
NP_002244. 1 mqskvllava lwlcvetraa svglpsvsld qkdi ltikantth rdld
wlwpnnqsgs eqrvevtecs dglfcktlti dtga kafyretdl asviyvyqu
Exemplary nucleic yrspfiasvs dqhgvvyite nknktvvipC lgsisnlnvs lcarypekrf vpdgnriswd
acid sequence
skkgftipsy mfo eakindesyq simyivvvvg yriydvvlsp shgielsvge
ng human
tart elnvgidfnw eypsskhqhk lktq sgsemkkfls tltidgvtrs
VEGFRZ
dqglytcaas sglmtkknst fvrvhekpfv afgsgmeslv eatvgervri pakylgyppp
eikwykngip ikag hvltimevse rdtgnytvil tnpiskekqs hvvslvvyvp
pqigekslis pvd8yqygtt qtltctvyai ppphhihwyw qleeecanep sqavsvtnpy
pceewrsved fqggnkievn kanaliegk nktvstlviq aanvsalykc eavnkvgrge
rvisfhvtrg peithpqu vslw Ctadrstfen gpqp lpihvgelpt
pvcknldtlw klnatmfsns melk quy vclaqdrktk krhcvvrqlt
vlervaptit gnlenqttsi gesievscta sgnpppqimw fkdnetlved sgivlkdgnr
vrke deglythaC svlgcakvea ffiiegaqek tnleiiilvg taviamffwl
2015/068069
GenBank
Accession
Nnnflmrand Sequence
Description
llviilrtvk ranggelktg ylsivmdpde lpldehcerl pydaskwefp rdrlklgkpl
grgafgqvie adafgidkta tcrtvavkml kegathsehr almselkili highhlnvvn
llgactkpgg plmvivefck fgnlstylrs pykt kgarfrqgkd yvgaipvdlk
rrldsitssq ssassgfvee kslsdveeee apedlykdfl tlehlicysf qvakgmefla
srkcihrdla arnillsekn vvkicdfgla rdiykdpdyv lplk wmapetifdr
vytiqsdes fgvllweifs lgaSPypgvk ideefcrrlk egtrmrapdy qtml
dcwhgepsqr ptfselvehl naqq dgkdyivlpi setlsmeeds glslptspvs
cmeeeevcdp kfhydntagi sqqunskrk srpvsvktfe dipleepevk vipddnqtds
gmvlaseelk tledrtklsp sfggmvpsks resvasegsn qtsqusgyh tvys
seeaellkli eiqutgsta qilqusgtt lssppv
NM_001716.4 aaaaaaaaaa agtgatgagt gcag gtcgcggccc tactgcctca ggagacgatg
cgcagc:cat ttgcttaaat ttgcagctga cggctgccac ctctctagag gcacctggcg
Exemplary nucleic gggagcctct caacataaga cagtgaccag tctggtgact cacagccggc acagccatga
acid sequence
cgct ggaa atggacctcg agaacctgga ggacctgttc tgggaactgg
ng human
acagat:gga caactataac gacacctccc :ggaaaa ctgc cctgccacag CXCR5
aggggcccct catggcctcc ttcaaggccg :cgtgcc cgtggcctac agcc :catct
tcctcc;ggg cgtgatcggc aacgtcctgg :ggtgat cctggagcgg caccggcaga
cacgcagttc cacggagacc ttcctgttcc :ggccgt ggccgacctc ctgc :ggtct
tcatct:gcc ctttgccgtg gccgagggct :gggctg ggtcctgggg acct :cctct
gcaaaactgt gattgccctg cacaaagtca act :ctactg cagcagcctg ctcc :ggcct
gcatcgccgt ggaccgctac ctggccattg tccacgccgt ccatgcctac cgccaccgcc
gcctcc:ctc catccacatc acctgtggga cca :ctggct ggtgggcttc ctcc :tgcct
tgccagagat tctcttcgcc aaagtcagcc atca caacaactcc ctgccacgtt
gcacct:ctc ccaagagaac caagcagaaa cgcatgcctg gttcacctcc cgat :cctct
accatg:ggc gggattcctg atgc tgg :gatggg ctggtgctac gtgggggtag
ggtt gcgccaggcc cagcggcgcc ctcagcggca gaaggcagtc aggg :ggcca
:gac aagcatcttc ttcctctgct ggtcacccta ccacatcgtc atct :cctgg
acaccc:ggc gaggctgaag gccgtggaca atacctgcaa gctgaatggc tctc :ccccg
tggcca2cac catgtgtgag ttcctgggcc tggcccactg ctgcctcaac ccca :gctct
acactt:cgc cggcgtgaag ttccgcagtg acc :gtcgcg gacg aagc :gggct
gtaccggccc cctg tgccagctct tccctagctg gcgcaggagc agtc :ctctg
agtcagagaa ctct ctcaccacgt tccc agtgtcccct ttta :tgctg
cttttcct;g gggcaggcag tgatgctgga tgc :ccttcc aacaggagct 9993 :cctaa
gggctcaccg tggctaagag tgtcctagga gta :cctcat ttggggtagc tagaggaacc
aaccccca;t tctagaacat ccctgccagc tct :ctgccg gccctggggc taggctggag
gagc ggaaagcagc tcaaaggcac ggct gtccttaccc atctgcaccc
ccctgggc:g agagaacctc acgcacctcc catcctaatc atccaatgct caagaaacaa
cttctactzc tgcccttgcc aacggagagc gcc :gcccct cccagaacac actccatcag
cttaggggct gctgacctcc acagcttccc ctc :ctcctc ctgcccacct gtcaaacaaa
gccagaagct gagcaccagg ggatgagtgg agg :taaggc tgaggaaagg ccagctggca
gcagagtg;g gccttcggac aactcagtcc ctaaaaacac agacattctg ccaggccccc
gcag tcatcttgac caagcaggaa actg gttgagttca ggtagctgcc
cctggctc:g accgaaacag cgctgggtcc accccatgtc accggatcct tctg
caggcagggc tgactctagg tgcccttgga ggccagccag tgacctgagg aagcgtgaag
gccgagaagc gaaa cccgacagag ggaagaaaag agctttcttc ccgaacccca
aggagggaga tggatcaatc aaacccggcg gtcccctccg ccaggcgaga tggggtgggg
tggagaactc ctagggtggc tgggtccagg ggatgggagg ttgtgggcat tgatggggaa
GenBank
Accession
Number and Sequence
Description
ggaggctggc ttgtcccctc ctcactccct tcccataagc tatagacccg aggaaactca
gagtcggaac aggt ggactggaag gggcccgtgg gagtcatctc aaccatcccc
tccgtggcat caccttaggc agggaagtgt aagaaacaca cagg gaagtcccca
ggccccagga agccgtgccc tgcccccgtg aggatgtcac tcagatggaa ccgcaggaag
Ctgctccgtg cttgtttgct gggt gtgggaggcc Cgtccggcag ttctgggtgc
tccctaccac ctccccagcc agg tggggagtca cctg cccttgtccc
actcaagcca agcagccaag :ccttggga ggccccactg gggaaataac ggct
cacgtgagag tgtcttcacg caggacaac gaggaagccc taagacgtcc cttttttctc
tgagtatctc ctcgcaagc: ggtaatcga tgggggagtc tgaagcagat gcaaagaggc
ctgg attttgaat: :ctttttaa taaaaaggca cctataaaac aggtcaatac
agtacaggca gcacagagac cccggaaca agcctaaaaa ttgtttcaaa ataaaaacca
agaagatgtc ttcacatat- :aaaaaaaa aaaaaaaaa
NM_032966.2 ccactctaag gaatgcggtc cctttgacag gcgaaaaact gaagttggaa aagt
ttca aaattgaaa: t;gaaacttg acatttggtc agtgggccc; atgtaggaaa
Exemplary nucleic aaacctccaa gagagctagg g:tcctctca gagaggaaag acaggtcct: aggtcctcac
acid sequence
cctcccgtct ccttgccct: gcagttctgg gaactggaca gat :ggacaa ctataacgac
encoding human
acctccctgg tggaaaatca tctctgccct gccacagagg ggcccctca; cttc
CXCRS
aaggccgtgt tcgtgcccg: ggcctacagc ctcatcttcc tcc :gggcg : gatcggcaac
gtcctggtgc tggtgatcc: ggagcggcac cggcagacac gcagttccac ggagaccttc
Ctgttccacc tggccgtggc Cgacctcctg ttca tct :gccct; tgccgtggcc
gagggctctg tgggctggg: cctggggacc ttcctctgca aaactgtga: tgccctgcac
aaagtcaact tctactgcag cagcctgctc ctggcctgca tcgccgtgga ccgctacctg
gccattgtcc tcca tgcctaccgc caccgccgcc tcc :ctcca; ccacatcacc
tgtgggacca tctggctgg: gggcttcctc cttgccttgc cagagattc: cttcgccaaa
gtcagccaag gccatcacaa caactccctg ccacgttgca cct :ctccca agagaaccaa
gcagaaacgc atgcctggt; cacctcccga ttcctctacc atg 399C999 attcctgctg
ctgg tgatgggctg gtgctacgtg gtgc acaggttgcg ccaggcccag
cggcgccctc agcggcagaa ggcagtcagg gtggccatcc tgg :gacaag cttc
thtgctggt caccctacca catcgtcatc ttcctggaca CCC :ggcgag ggcc
aata cctgcaagct gaatggctct ctccccgtgg cca :caccat gtgtgagttc
ctgggcctgg cccactgctg cccc atgctctaca ctt :cgccgg cgtgaagttc
gacc ggct cctgacgaag ctgggctgta ccggccctgc thcctgtgc
ttcc ctagctggcg caggagcagt ctctctgagt cagagaatgc cacctctctc
accacgttct aggtcccagt gtcccctttt attgctgctt gggg gtga
tgctggatgc tccttccaac aggagctggg atcctaaggg thaccgtgg Ctaagagtgt
cctaggagta tcctcatttg gggtagctag aggaaccaac ccccatttct agaacatccc
tgccagctct tctgccggcc Ctggggctag gctggagccc agggagcgga aagcagctca
aaggcacagt gaaggctgtc Cttacccatc tgcacccccc tgggctgaga gaacctcacg
ccat cctaatcatc caatgctcaa gaaacaactt ctacttctgc ccttgccaac
ggagagcgcc tgcccctccc agaacacact gctt aggggctgct gacctccaca
gcttcccctc tctcctcctg cccacctgtc aaacaaagcc agaagctgag caccagggga
tgagtggagg ttaaggctga ggaaaggcca gctggcagca gagtgtggcc ttcggacaac
tcagtcccta aaaacacaga cattctgcca ggcccccaag cctgcagtca tcttgaccaa
gcaggaagct ggtt gagttcaggt agctgcccct ggctctgacc gaaacagcgc
tgggtccacc ccatgtcacc ggatcctggg tggtctgcag gcagggctga ctctaggtgc
ccttggaggc cagccagtga cctgaggaag cgtgaaggcc gagaagcaag aaagaaaccc
ggga agaaaagagc tttcttcccg aaccccaagg agggagatgg atcaatcaaa
GenBank
Accession
and Sequence
Description
ggtc ccctccgcca ggcgagatgg ggtggggtgg agaactccta gggtggctgg
m :ccagggga tgggaggttg tgggcattga tggggaagga 99Ctggcttg tcccctcctc
mctcccttcc cataagctat agacccgagg agag tcggaacgga gaaaggtgga
0 :ggaagggg cccgtgggag tcatctcaac catcccctcc gtggcatcac cttaggcagg
maagtgtaag aaacacactg ggaa aggc CCCaggaagc Cgtgccctgc
Occcgtgagg atgtcactca gatggaaccg caggaagctg thcgtgctt tcac
0 :ggggtgtg ggaggcccgt ccggcagttc tgggtgctcc ctaccacctc cccagccttt
matcaggtgg ggagtcaggg acccctgccc ttgtcccact caagccaagc agccaagctc
0 :tgggaggc cccactgggg aaataacagc tgtggctcac gtgagagtgt cttcacggca
Qgacaacgag ctaa gacgtccctt ttttctctga gta :thctc tggg
(* aatcgatgg gggagtctga agcagatgca aagaggcaag aggCtggatt tttc
fl taa aaaggcacct ataaaacagg tcaatacagt acaggcagca cagagacccc
cggaacaagc ctaaaaattg tttcaaaata aaaaccaaga aga :gtcttc acatattgta
aaaaaaaaaa aaaaaa
NP_116743.1 masfkavap vayslifllg Vignvlvlvi lerhrqtrss tet Elfhlav adlllvfilp
svgw vlgtflcktv ialqunfyc ciav dry.Zaivhav rlls
Exemplary amino ihitcgtiwl vgfllalpei ghh nnslprctfs qenqaethaw yhva
acid sequence for
gfllpmlvmg wcyvgvvhrl rqaqrrpqrq kavrvailvt sif Elcwspy hivifldtla
human CXCRS
rlkavdntck lngslpvait mceflglahc clnpmlytfa gvk frsdlsr ctgp
precursor
aslcqlfpsw esen atslttf
NP_00 1707. l mnypltlemd lenledlfwe ldrldnyndt slvenhlcpa tegplmasfk avapvaysl
ifllgvignv lvlvilerhr qtrsstetfl fhlavadlll vfi lpfavae gsvnglgtf
Exemplary amino alhk slll aciavdryla ivhavhayrh rrl lsihitc gfll
acid sequence for
alpeilfakv sqghhnnslp rctfsqenqa ethawftsrf lyhvagfllp mlvmgwcyvg
human CXCRS
vvhrquaqr rpqquavrv ailvtsiffl cwspyhivif ldt larlkav dntcklngsl
precursor
pvaitmcefl glahcclnpm sdlsrlltkl gctgpaslcq lfpswrrssl
sesenatslt tf
NM_031200.2 gcttcctttc tcgtg::gtt atcgggtagc tgcctgctca gaacccacaa agcctgcccc
tcatcccagg cagagagcaa cccagctc:t tccccagaca gctg gtggtgcctg
Exemplary nucleic 0 :gtcccagg gagag;;gca tcgccctcca cagagcaggc :tgcatctga Ctgacccacc
acid sequence
m :gacaccca cagac;:cac aagcccta;t cctaacatgg ctgatgacta tggctctgaa
ng human
fi' ccacatct cca:ggaaga Ctacgttaac ttcaacztca ctgacttcta ctgtgagaaa
CCR9
mm0m9)wm :ca ggcag;;tgc gagccatt ctcccaccct :g;actggc; Cgtgttcatc
m :gggtgcc: tgggcaacag tc;tgtta;c cttgtc;act gg;actgcac aagagtgaag
mccatgaccg aca:g::cct tt:gaatt:g gcaattgctg acc :cctct tcttgtcact
0 :tccct;c; 2tgc tgctgctgac aagt :CCagacct catgtgcaag
m :ggtcaaca gca:g;acaa ga;gaact;c tacagc;gtg :g; :gctga catgtgcatc
mgcgtggaca ggtaca:tgc caztgcccag gccatgagag cacatacttg gagggagaaa
mggcttt;g; acagcaaaat gg;ttgct;t accatc;ggg :ggcagc tgctctctgc
m :cccagaaa tct;a;acag ccaaatcaag gaggaa2ccg :tgcta ctgcaccatg
m :ttacccta gcgatgagag caccaaac:g aagtcagctg :gaccc gaaggtcatt
O 2C; tcc;tccctt Cg;ggtca;g gcttgc;gct ataccatca cattcacacc
0 :gatacaag ccaagaagtc ttccaagcac aaagccctaa :gacca cactgtcctg
accgtct:tg :gtctca ctac aactgcattt :g :ggtgca gaccattgac
gcctatgcca tgt;catctc caactgtgcc gtttccacca aca :tgaca Ctgcttccag
WO 09668
GenBank
Accession
and Sequence
Description
gtcacccaga ccatcgcctt cttccacagt tgcctgaacc ctgttctcta tgtttttg'g
agat tccgccggga tctcgtgaaa accctgaaga acttgggttg catcagccag
gcccagtggg tttcatttac aaggagagag ggaagcttga agctgtcgtc tatgttgc
gagacaacct caggagcact ctccctctga ggggtcttct tgca tggttctt
ggaagaaatg agaaatacag aaacagtttc cccactgatg ggaccagaga gagtgaaaga
gaaaagaaaa ctcagaaagg gatgaatctg aactatatga ttac2tgtag tcagaatt;g
ccaaagcaaa tatttcaaaa :caactgact agtgcaggag gctg:tgatt tgac
tgtgatgccc ctca aaggaggact aaggaccggc actg;ggagc gc
tgccactcgc cggagcatca atgccgctgc ctctggagga gccc2tggat tttc:cca
gaac ttctgtggct :cagttctca :gctgcctct tccaaaaggg gacacagaag
cactggctgc tgctacagac Cgcaaaagca gaaag;;tcg tgaaaatgtc catc:ttggg
aaattttcta ccctgctctt gata acccazgcca ggtc;tatag attcctga;c
tagaaccttt ccaggcaatc :Cagacctaa :ttcc::ctg ttctccttgt tctg:tctgg
gccagtgaag gtccttgttc :gattttgaa acgatc;gca ggtc2tgcca gtgaacccct
ggacaactga ccac tcca aagtc;g;tg gcttccaatc catt;ctg
tcctgctgga ggt:ttaacc :agacaagga ::at tcct:ggtat ggtgacag
tctctccatg gcag ggagattata acagc;gggt tcgcaggagc cagccttggc
cctgttgtag gct;gttctg :tgagtggca cttgc ;;gg g;ccaccgtc tgtc;gctcc
Ctagaaaatg ggc:ggttct :ttggccctc :tctt:c:ga gcccacttt attc:gagga
atacagtgag cagatatggg cagcagccag gtagggcaaa gggtgaagc gcaggccttg
Ctggaaggct att;acttcc atgcttctcc :tttc;;act :atagtggc aaca;tttaa
ttaa cttagagatt aaaa aaataag:aa ggaattcac ctttgcatct
tttgtgtctt tct:a;catg atttggcaaa atgca2cacc :tgaaaata tttcacatat
tggaaaagtg Ctt;t;aatg tgtatatgaa gcattaa2ta :tgtcactt ccct
gtctcaatat tttaagtgtg tgcaattaaa gatcaaa:ag :acatt
N}4001256369_1 gcttcctttc tcg;g;tgtt atcgggtagc 2ca gaacccacaa agcc;gcccc
cagg cagagagcaa cccagctctt tccccagaca C:gagagctg gtgg:gcctg
ExenqflaU’HUdem ctgtcccagg gagag;tgca tcgccctcca aggc t:gcatctga ctgacccacc
acid sequence
atgacaccca cagac;tcac atctcctcca ggccccgctc cagatcacct tccc;cgctg
encoding human
gcccaggaat ccatc:cctt ccaggacctt agcccaggac taacacaagc ccta:tccta
CCR9
acatggctga tgactatggc tctgaatcca catct:ccat ggaagactac gttaacttca
ac;tcactga Cttctactgt gagaaaaaca atg;caggca gtttgcgagc ctcc
caccct;g;a ctggc;cgtg ttcatcg;gg gtgcc;tggg caacagtc;t gtta:ccttg
gg:a Ctgcacaaga gtgaagacca tgaccgacat gttccttt:g aatt:ggcaa
ttgctgacc cctct2tctt gtcactc;tc cct;c;gggc cattgctgct gctgaccagt
gacct2catg tgcaagg;gg gcat gtacaaga aact:ctaca
gctgazcatg tgcatcagcg tggacaggta cattgcca:t gcccaggcca
tacttggagg gagaaaaggc ttt;g;acag caaaatgg;t tgct2tacca
ggcagctgct ctctgca;cc tctt ccaa atcaaggagg
tgctazctgc accatgg:tt accctagcga tgagagcacc aaac:gaagt
gaccc;gaag gtcattc;gg ggt;c;tcct tcccttcgzg gtca;ggctt
catca2catt cacaccc;ga ccaa ttcc aagcacaaag
gaccazcact gtcctgaccg tct:tgtctt gtctcagt:t ccctacaact
ggtgcagacc attgacgcct atgccatgtt catctccaac gttt
ccaccaaca tgaca2ctgc ttccagg;ca cccagaccat cgccttct cacagttgcc
tgaaccctg tctctatgtt tttgtgggtg tccg ccgggatc:c gtgaaaaccc
tgaagaac; gggttgcatc agccaggccc agtgggtttc atttacaagg agagagggaa
GenBank
Accession
Number and Sequence
Description
gcttgaagct fi'Ofi'mmfi'fi'fl'fi'OLQLQ :gccagtga:cgtctatg ttgctggaga caacctcagg agcactctcc :ctgagggg
tcttctctga gtgcatggt tcttttggaa gaaatgagaa atacagaaac gtttcccca
ctgatgggac agagagagt gaaagagaaa agaaaactca gaaagggatg atctgaact
atatgattac :gtagtcag aatttgccaa agcaaatatt tcaaaatcaa :gactagtg
caggaggctg :gattggct Cttgactgtg atgcccgcaa ttctcaaagg ggactaagg
accggcactg ggagcaccc :ggctttgcc actcgccgga atgc gctgcctct
ggaggagccc :ggattttc cact gtgaacttct gtggcttcag gct
gcctcttcca aaggggaca cagaagcact ggctgctgct acagaccgca SD 9)LO0 SD LQ SD 9) DJ
SDSJJOLQWOOLQOFl'le—Q :cacctttg:2tcgtgaa atgtccatc aaat tttctaccct gctcttgagc :gataaccc
:gccaggtc :atagattc taga acctttccag gcaatctcag O ‘1. Sb 9) :tc
;;ctgttct cttgttctg :tctgggcca gtgaaggtcc ttgttctgat
O :gcaggtc ggac aactgaccac aagg
:gttggctt ccaatccatt :Ctgtgtcct gctggaggtt taga
Q :tattcct ggtg acagtgtctc tccatggcct gagcagggag
:gggttcgc aggagccagc Cttggccctg ttgtaggctt gttctgttga :ggcac
::tgggtcc accgtctgtc ctag aaaatgggct tttg ccctc:
gcc cactttattc atac caga tatgggcagc gccagg gcaaagggg tgaagcgcag gccttgctgg aaggctattt atgc WQJKQLQQJOOFT'gOSDWOSDOSDSDO:ctcc;
::actctat agtggcaaca :tttaaaagc ttttaactta aggc tgaaaaaaat
agtaatgga attcaccttt gcatcttttg tgtctttctt atcatgattt ggcaaaa;gc
aaaatatttc tgga aaagtgcttt ttaatgtgta tatgaagcat
taattacttg tctt :accctgtct caatatttta agtgtgtgca attaaagatc
aaatagatac att
NP_112477.1 mtptdftspi pnmaddygse dyvn fnftdfycek nnvrqfashf lpplywlvfi
vgalgnslvi lvywyctrvk tmtdmfllnl aiadllflvt lpfwaiaaad qwqutfmck
Exemplary amino vvnsmykmnf yscvllimci svdryiaiaq amrahtwrek rllyskmvcf tiwvlaaalc
acid ce for
ipeilysqik eesgiaictm stkl ksavltlkvi lgfflpfvvm accytiiiht
human CCR9
liqakkssch kalkvtitvl tvalsquy ncillvqtid snca vstnidich
precursor
vtqtiafqu yva gerfrrdlvk tlknlgcisq aqusftrre gslklssmll
ettsgalsl
NP_001243298.1 l maddygses ; ssmedyvnfn ftdfyceknn vrqfashflp plywlvfivg algnslvilv
61 ywyctrvk;m nlai adllflvtlp fwaiaaadqw qutfmckvv nsmykmnfys
Exemplary amino 121 cvllimcisv dryiaiaqam rahtwrekrl lyskmvcfti wvlaaalcip eilysqikee
acid sequence for
181 sgiaictmvy psdestklks avltlkvilg fflpfvvmac cytiiihtli qakksskhka
human CCR9
241 lkvtitv1;v fvlsquync illvqtiday amfisncavs tnidichvt qtiaffhscl
precursor
301 npvlyvage rfrrdlvktl knlgcisqaq wvsftrregs lklssmllet tsgalsl
NM_000885.4 ataacgtc tgtcactaaa atgttcccca 9999CCtth gcgagtcttt ttgtttggtt
ttttgttt:t aatctgtggc tcttgataat ttatctagtg gttgcctaca cctgaaaaac
Exemplary nucleic aagacacagt gtttaactat caacgaaaga actggacggc ccgc agtcccactc
acid sequence
cccgagtt;g tggctggcat ttgggccacg ccgggctggg cggtcacagc gaggggcgcg
encoding human
cagtttgggg tcacacagct ccgcttctag gccccaacca ccgttaaaag gggaagcccg
tgccccatca ctct tgctgagccc agagccatcc Cgcgctctgc gggctgggag
gcccgggcca ggacgcgagt cagc cgaggttccc cagcgccccc tgcagccgcg
cgtaggcaga gacggagccc ggccctgcgc ctccgcacca cgcccgggac cccacccagc
ggcccgtacc cggagaagca gcgcgagcac ccgaagctcc cggctggcgg cagaaaccgg
2015/068069
GenBank
Accession
Number and Sequence
Description
gagtggggcc gggcgagtgc gcggcatccc aggccggccc gaacgctccg cccgcggtgg
gccgacttcc cctcctcttc cctctctcct tcctttagcc Cgctggcgcc ggacacgctg
Cgcctcatct cttggggcgt tcttccccgt tggccaaccg tcgcatcccg tgcaactttg
gggtagtggc cgtttagtgt tgaatgttcc ccaccgagag cgcatggctt gggaagcgag
gcgcgaaccc ggcccccgaa gggccgccgt ccgggagacg gtgatgctgt tgctgtgcct
gggggtcccg accggccgcc cctacaacgt ggacactgag agcgcgctgc tttaccaggg
cccccacaac acgctgttcg gctactcggt Cgtgctgcac gggg cgaaccgatg
gctcctagtg ggtgcgccca Ctgccaactg gctcgccaac gcttcagtga tcaatcccgg
ggcgatttac agga tcggaaagaa tcccggccag acgtgcgaac agctccagct
ccct aatggagaac cttgtggaaa gacttg:ttg gaagagagag acaatcagtg
gttgggggtc acac;ttcca gacagccagg agaaaa;gga tccatcgtga cttgtgggca
tagatggaaa aata2atttt agaa tgaaaa2aag thcccactg gtggttgcta
tggagtgccc cctgatttac gaacagaact gagtaaaaga atagctccgt aaga
ttatgtgaaa aaa;;tggag aaaattttgc atcatg;caa gctggaatat ccagttttta
cacaaaggat ttaa2tgtga tgggggcccc aggatcatct tactggactg gctctctttt
caat ataactacaa ataaatacaa ggcttt:tta gacaaacaaa atcaagtaaa
atttggaagt tat;;aggat attcagtcgg agctgg;cat :tcggagcc agcatactac
Cgaagtagtc ggaggagctc thaacatga gcagat;ggt aggcatata tattcagcat
tgatgaaaaa aata tct:acatga aatgaaaggt aaaagcttg gatcgtactt
tggagcttct gctg tggacctcaa tgcaga;ggc :ctcagatc tgctcgtggg
agcacccatg cagagcacca tcagagagga aggaagagtg :tgtgtaca tcaactctgg
gca gtaa:gaatg caa:ggaaac aaacctcgtt aca ctgc
aagatttggg :Ctatag ttaatcttgg cgacat;gac gct ttgaagatgt
tgctatcgga caag aagatgactt gcaagg;gct :ttatattt acaatggccg
tgcagatggg atc:cgtcaa cct:ctcaca gagaat:gaa gacttcaga aatc
gttaagtatg tttggacagt Cta2atcagg acaaat;gat cagataata atggctatgt
agatgtagca gctt ttcggtctga ttctgc;gtc :gctaagga ctgt
agtaattgt gacgcttctt accc tgagtcagta OWWLQLQQJQJLQWFT'QJSDFT'atagaacga aatt:gactg
tgttgaaaa ggatggcctt Ctg;gtgcat agatctaaca tct cata2aaggg
caaggaagt ccaggttaca tgtt ttataacatg agtttggatg tgaacagaaa
ggcagagtc ccaccaagat tctatttctc ttctaatgga acttctgacg tgat:acagg
aagcatacag gtgtccagca gagaagctaa ctgtagaaca catcaagcat ttatgcggaa
agatgtgcgg gacatcctca ccccaattca gattgaagct gcttaccacc ttgg;cc;ca
tgtcatcag: aaacgaagta cagaggaatt cccaccactt cagccaattc ttcagcagaa
gaaagaaaaa atga aaaaaacaat aaact:tgca aggttttgtg ccca:gaaaa
ttgttc;gc gatttacagg caaa gattgggttt ttgaagcccc atgaaaa2aa
aacata;ct ggga agac attga:gttg aatgtgtcct tgtt:aa;gc
tggaga:ga gcatatgaaa Cgactctaca tgtcaaacta cccgtgggtc ttta2ttcat
taagat2tta gagctggaag agaagcaaat aaactgtgaa gtcacagata actc;ggcgt
ggtacaact: gactgcagta ttggctatat atatg;agat catctctcaa ggataga2at
tagctt:ctc ctggatgtga gctcactcag cagagcggaa gaggacctca gtatcacagt
gcath2aCC tgtgaaaatg aagaggaaat ggacaatcta agca gagtgac;gt
acc: ttaaaatatg aggttaagct gactg;tcat gggtttgtaa acccaac2tc
atttgtgta: ggatcaaatg atgaaaatga gcctgaaacg tgcatggtgg agaaaatgaa
Cttaac;ttc catgttatca acactggcaa tagta;ggct cccaatgtta gtgtggaaat
aatggtacca aattctttta gcccccaaac tgataagctg ttcaacattt tggatgtcca
gactac2ac: ggagaatgcc actttgaaaa ttatcaaaga gtgtgtgcat tagagcagca
aaagag;gca atgcagacct tgaaaggcat agtccggttc ttgtccaaga Ctgataagag
GenBank
Accession
Number and ce
Description
gtac tgcataaaag ctgatccaca ttgtttaaat ttcttgtgta KQQJQJS‘DFV'SDKQLQLQWWQSD :tttgggaa
aatggaaagt gaag ccagtgttca actg gaaggccggc atccatttt
agaaatggat gagacttcag cactcaag;t tgaaataaga gcaacaggtt :ccagagcc
aaatccaaga gtaattgaac taaacaagga tgagaatgtt gcgcatgttc actggaagg
actacatcat caaagaccca at;t caccatagtg attatttcaa :agcttgct
acttggactt attgtacttc tgttgatc;c atatgttatg tggaaggctg cttctttaa
aagacaatac aaatctatcc tacaagaaga aaacagaaga gacagttgga :tatatcaa
cagtaaaagc aatgatgatt aaggacttct ttcaaattga gagaatggaa acagactca
ggttgtagta aagaaattta aaagacaczg tt:acaagaa aaaatgaatt gac
:tcttt2act catgatcttg tgacatat:a tg:cttcatg caaggggaaa caa
:gattactct ttgagataga agaactgcaa aggtaataat acagccaaag :aatctctc
agcttt2aaa gaga aacactaaag ca;tcaattt attcaagaaa gtaagccct
:atc ttgaaatgaa agtataaczg ag:taaatta agaa :cttagact
:gaaatacta cttaccatat gtgcttgcct cagtaaaatg ac:g ggtgggcaga
ggttca2ttc aaatacatct ttgatactzg ttcaaaatat taaa aatataattt
:ttagagagc tgttcccaaa ttttctaacg ag:ggaccat :atcactt:a aagccc:tta
:ttataatac atttcctacg ggctgtgt;c caacaaccat :ttttttcag cagac:atga
:agt attataggcc aaactggcaa ac;tcagact gaacatgtac actgg;;tga
:gaa attacttctg gataatta:t tt:ttataat :atggatt:c accatc:ttc
:ata tatacatgtg :ttttatg;a gg:atatatt :accattc ; cctatc;att
Cttcctataa cacaccttta :Caagcatac ccaggagtaa :Cttcaaa;c ;;ttg;;ata
:tctgaaaca aaagattgtg agtgttgcac tt:acctgat acacgctga: ::agaaaata
cagaaaccat acctcactaa :aactttaaa atcaaagctg :gcaaagac: agggggccta
:acttcatat gtattatgta aaaa tattgactat cacacaacza ;;tCC;;gga
:gtaattctt tgttaccctt :acaagtata ag:gttacct :acatggaaa aaca
aaattcataa attc ataaatt:ag gata c:gattcaa: ;;gta:acag
:gaatataaa tgagacgaca gcaaaat2tt catgaaatgt aaaatat;;; :atag;;tgt
:catactata tgaggttcta :t::aaa:ga ggat ::taaaaaa: ::ctt:aaat
acaatcattt ttgtaatatt :a;;tta:gc tta:gatcta gataattgca gaata:ca;t
:tatctgact Ctgccttcat aagagagctg tggccgaatt :2gaaca;c; g;tataggga
gtgatcaaat tagaaggcaa :ggaaaaa caa:tctggg aagatt:c: ::ata:gaag
:ccctgccac gcca :cc:aat:ga tgaaagttat :gttcacag gcctgcag;g
atggtgagga atgttctgag at;;gcgaag gca2ttgagt gtgaaa aagcacaaaa
cctcc:gaac ccagagtgtg :a;acacagg aataaacttt :gacat :gtat;tt:a
aaaaactttg tatcgttata aaaaggczag tca:tctttc ctaggatcat
agatgaaaaa tcaagccccg at;;agaact gtc2tctcca :aaggaaa;t
tggt tctttcctac :cagaac:ac tcagaaacaa atct
gagcacagtg aaagcagagt ac:atgg:tg tccaacacag :acaagggga
ttac atattgggct aga2tttgcc cag;tcaaaa :atcaact
ctttg;tact tgtatcatga at;:taaaac actt taagaagaca gggatggg
attct2tttt ggcaggtagg Cta:ataact atg:gatttt gaaatttaac :gctctggat
tagggagcag tgaatcaagg cagacttatg aaa;ctgtat tatatttgta acagaata
ggaaa;ttaa cataattgat gagctcaaat cctgaaaaat gaaagaatcc aaattatt
agaat2atct aggttaaata ttgatgtatt atgatggttg caaagttttt :tgtgtgtcc
aataaacaca ttgtaaaaaa aa
26 N14 0008892 aaatc2tccc caccctgggg actt cctcctctgc cgtctcccag atcagtacac
aaaggctgct gcca gaggaaggac tgctctgcac gcacctatgt ggaaactaaa
GenBank
Accession
Number and ce
ption
Exenqflanlnudcm gcccagagag tgac ttgccccaca gccagtgagt gactgcagca gcaccagaat
addsequcnce Ctggtctgtt tcctgtttgg acc actacggctt gggatctcgg gcatggtggc
encmflnglnnnan tttgccaatg gtccttgttt tgctgctggt cctgagcaga ggtgagagtg aattggacgc
fi7 caagatccca tccacagggg atgccacaga atggcggaat cctcacctgt ccatgctggg
ccag ccagccccct cctgccagaa gtgcatcctc tcacacccca gctgtgcatg
gtgcaagcaa ctgaacttca ccgcgtcggg agaggcggag gcgcggcgct gcgcccgacg
agaggagctg ctggctcgag gctgcccgct ggaggagctg gaggagcccc gcggccagca
ggagg:gctg caggaccagc cgctcagcca gggcgcccgc ggagagggtg ccacccagct
ggcgccgcag cgggtccggg tcacgctgcg gcctggggag ccccagcagc tccaggtccg
Cttcc:tcgt gctgagggat acccggtgga cctgtactac cttatggacc tgagctactc
ggac gacctggaac gcgtgcgcca gctcgggcac gctctgctgg tccggctgca
ggaag;cacc cattctgtgc gcattggttt tggttccttt aaaa cggtgctgcc
Ctttg:gagc acagtaccct ccaaactgcg ccacccctgc cccacccggc tggagcgctg
ccagtcacca ttcagctttc accatgtgct gtccctgacg ggggacgcac aagccttcga
gcgggaggzg gggcgccaga gtgtgtccgg caatctggac tcgcctgaag g :ggcttcga
tc:g caggctgcac tctgccagga tggc tggagaaatg tgtcccggct
gctgg:gt;c acttcagacg acacattcca tacagctggg gacgggaagt tgggcggcat
tttca;gccc agtgatgggc actgccactt ggacagcaat ggcctctaca g cac
agagt:tgac tacccttctg tgggtcaggt agcccaggcc ctctctgcag tcca
ct;t gctgtcacca gtgccgcact gcctgtctac caggagctga g;aaactgat
tcctaagtct gcagttgggg agctgagtga ggactccagc aacgtggtac agctcatcat
ggatgcttat aatagcctgt Cttccaccgt gacccttgaa tcac tccctcctgg
ggtccaca;t tcttacgaat cccagtgtga gggtcctgag gagg g tga
ggatcgagga cagtgcaacc acgtccgaat caaccagacg gtgactttct ctct
ccaagccacc cactgcctcc cagagcccca gagg thcgggccc t :ggcttctc
gczg attgtggagt tgcacacgct gtgtgactgt aattgcagtg acacccagcc
ccaggctccc cactgcagtg atggccaggg acaa tgtggtgtat gcagctgtgc
ccctggccgc ctaggtcggc tctgtgagtg ctctgtggca gagctgtcct ccccagacct
tggg tgccgggctc ccaatggcac agggcccctg tgcagtggaa agggtcactg
tcaatgtgga Cgctgcagct gcagtggaca gagctctggg catctgtgcg agtgtgacga
tgccagctgt gagcgacatg agggcatcct ctgcggaggc tttggtcgct gtgg
agtatgtcac tg:catgcca accgcacggg cagagcatgc gaa;gcagtg gggacatgga
cagttgcatc ag;cccgagg gagggctctg cagtgggcat ggacgctgca aatgcaaccg
ctgccagtgc ttggacggct actatggtgc tctatgcgac caa;gcccag gctgcaagac
cgag agacaccggg actgtgcaga gtgtggggcc ttcaggactg gcccactggc
caccaactgc ag;acagctt gtgcccatac caatgtgacc cccctatctt
ggatgatggc tggtgcaaag agcggaccct ggacaaccag tcttggtgga
ggatgacgcc agaggcacgg tcgtgctcag agtgagaccc gagcagacca
cacgcaggcc at;gtgctgg tagg gggcatcgtg tggggctggt
cctggcttac cggctctcgg tggaaatcta tgaccgccgg gctttgagaa
ggagcagcaa caactcaact ggaagcagga cagtaatcct a gtgccatcac
gaccaccatc aa;cctcgct ttcaagaggc agacagtccc actctctgaa ggagggaggg
acacttaccc aaggctcttc tccttggagg acagtgggaa ctggagggtg agaggaaggg
tgggtctgta agaccttggt aggggactaa ttcactggcg agg:gcggcc accaccctac
ttcattttca gagtgacacc caagagggct gcttcccatg cctgcaacct tgcatccatc
tgggctaccc cacccaagta tacaataaag tcttacctca aaaa aaaaaaaa
NP 0008763 1 mawearrepg prraavretv mlllclgvpt grpynvdtes hnt lfgysvvlhs
2015/068069
GenBank
Nunflmrand Sequence
Description
hganrwllvg aptanwlana svinpgaiyr crigknpgqt ceqlqlgspn gepcgktcle
ary amino erdnqwlgvt lsrquengs ivtcghrwkn enkl ptggcygvpp skri
acid sequence for apcyqdyvkk fgenfascqa gissfytkdl ivmgapgssy wtgslfvyni afld
human (14
kqnqkagsy aghf rsqhttevvg gapqheqigk ayifsideke lnilhemkgk
precursor
klgsyfgasv cavdlnadgf sdllvgapmq grvf vyinsgsgav mnametnlvg
sdkyaarfge sivnlgdidn dgfedvaiga pqeddlqgai yiyngradgi sstfsqrieg
lqiskslsmf gqsisgqida dnngyvdvav gafrsdsavl lrtrpvvivd aslshpesvn
rtkfdcveng wpsvcidltl kevp gyivlfynms ldvnrkaesp prfyfssngt
sdvitgsiqv ssreancrth qafmrkdvrd iltpiqieaa yhlgphvisk rsteefpplq
piqukkekd imkktinfar fcahencsad lquakigfl kphenktyla vgsmktlmln
vslfnagdda yettlhvklp vglyfikile leekqincev tdnsgvvqld csigyiyvdh
lsridisfll dvsslsraee dlsitvhatc eneeemdnlk hsrvtvaipl kyevkltvhg
fvnptsfvyg sndenepetc mvekmnltfh Vintgnsmap nvsveimvpn sfqutdklf
nildvqtttg echfenyqrv caleqqksam qtlkgivrfl sktdkrllyc clnf
lcnfgkmesg iqle grpsilemde tsalkfeira tgfpepnprv ielnkdenva
hvlleglhhq tivi issslllgli Vlllisyvmw kagffquyk silqeenrrd
sksn dd
NP_000880.1 mvalpmvlvl llvlsrgese ldakipstgd atewrnphls mlgscqpaps chcilshps
cawckqlnft asgeaearrc arreellarg cpleeleepr gqqevlqdqp lsqgargega
Exemplary amino tqlapqrvrv tlrpgepqql quflraegy pvdlyylmdl sysmkddler vrqlghallv
acid sequence for
rlqevthsvr igfgsfvdkt vlpfvstvps klrhpcptrl ercqspfsfh daq
human B7
grqs vsgnldspeg qaal cqeqigwrnv srllvftsdd tfhtagdgkl
ggifmpsdgh Chldsnglys rstefdypsv gqvaqalsaa avts aalpquels
klipksavge lsedssnvvq limdaynsls stvtlehssl syes qcegpekreg
kaedrgqcnh vrinqtvtfw vslqathclp ephllrlral ivel htlcdcncsd
tqpqaphcsd gqghlchvc scapgrlgrl elss pdlesgcrap ngtgplcsgk
ghcchrcsc sgqssghlce cddascerhe gilcggfgrc chvchchan rtgracecsg
dmdscispeg glcsghgrck cnrcqcldgy ygalcquPg cktpcerhrd caecgafrtg
platncstac ahtnvtlala pilddgwcke rtldnqlfff lveddargtv vlrvrpqekg
adhtqaivlg cvggivavgl glvlayrlsv eiydrreysr fekeqqqlnw kqunplyks
aitttinprf qeadsptl
NM_016602.2 agagatgggg acggaggcca cagagcaggt ttcctggggc cattactctg gggatgaaga
ggacgcatac tcggctgagc cactgccgga gC :ttgctac aaggccgatg tccaggcctt
Exemplary nucleic cagccgggcc ttccaaccca gtgtctccct gaccgtggct gcgctgggtc tggccggcaa
acid sequence
tggcctggtc ctggccaccc acctggcagc ccgacgcgca tcgc ccacctctgc
encoding human
ccacctgctc cagctggccc tggccgacct ct :gctggcc ctgc ccttcgcggc
CCRlO
ggct Cttcagggct ggagtctggg aagtgccacc tgccgcacca tctctggcct
ctactcggcc tccttccacg ccggcttcct ct :cctggcc tgtatcagcg ccgaccgcta
cgtggccatc gcgcgagcgc tcccagccgg gccgcggccc tccactcccg gccgcgcaca
Cttggtctcc gtcatcgtgt tgtc ac :gctcctg gcgctgcctg tctt
cagccaggat gggcagcggg aaggccaacg acgctgtcgc ctcatcttcc ccgagggcct
cacgcagacg gtgaaggggg Cgagcgccgt ggcgcaggtg gccctgggct tcgcgctgcc
gctgggcgtc gcct gctacgcgct to :gggccgc acgctgctgg ccgccagggg
gcccgagcgc cggcgtgcgc tgcgcgtcgt 99 :ggctctg gtggcggcct tcgtggtgct
gcagctgccc tacagcctcg ccctgctgct ggatactgcc gatctactgg ctgcgcgcga
gcggagctgc cctgccagca aacgcaagga t9 tg Ctggtgacca gcggcttggc
GenBank
Accession
Nnnflmrand Sequence
Description
cctcgcccgc tgtggcctca ttct ctacgccttc ctgggcctgc gcttccgcca
ggacctgcgg aggctgctac ggag ctca gggcctcaac cccgccgcgg
ctgcccccgc cggccccgcc tttcttcctg ctcagctccc acggagaccc acagtctctc
ctgggacaac tagggctgcg aatctagagg 3999990399 gtcg tgggaaaggg
gagtaggtgg gggaacactg agaaagaggc agggacctaa agggactacc tctgtgcctt
gccacattaa attgataaca tggaaatgag atgcaaccca acaa
AF215981.1 agagatgggg acggaggcca cagagcaggt ttcctggggc cattactctg gggatgaaga
ggacgcatac tcggctgagc cactgccgga gC :ttgctac aaggccgatg tccaggcctt
Exemplary nucleic cagccgggcc ttccaaccca gtgtctccct gaccgtggct gcgctgggtc tggccggcaa
acid sequence
tggcctggtc ctggccaccc acctggcagc ccgacgcgca gcgcgctcgc ccacctctgc
encoding human
gctc cagctggccc tggccgacct ct cc Ctgactctgc ccttcgcggc
CCRIO
ggct cttcagggct ggagtctggg cacc tgccgcacca tctctggcct
Ctactcggcc tccttccacg ccggcttcct ct cc agcg ccgaccgcta
Cgtggccatc gcgcgagcgc tcccagccgg gccgcggccc cccg gccgcgcaca
Cttggtctcc gtcatcgtgt ggctgctgtc ac :gctcctg gcgctgcctg cgctgctctt
cagccaggat gggcagcggg aaggccaacg tcgc thatcttcc ccgagggcct
cacgcagacg gtgaaggggg Cgagcgccgt ggcgcaggtg gccctgggct tcgcgctgcc
gctgggcgtc atggtagcct gctacgcgct tc :gggccgc acgctgctgg ccgccagggg
gcccgagcgc cggcgtgcgc tgcgcgtcgt 99 :ggctctg gtggcggcct tcgtggtgct
gcagctgccc tacagcctcg ccctgctgct ggatactgcc ctgg gcga
gcggagctgc cctgccagca aacgcaagga t9 :cgcactg acca gcggcttggc
cctcgcccgc tgtggcctca atcccgttct ctacgccttc Ctgggcctgc gcttccgcca
ggacctgcgg aggctgctac ggggtgggag ctcgccctca gggcctcaac cccgccgcgg
Ctgcccccgc cggccccgcc tttcttcctg ctcagctccc acggagaccc acagtctctc
Ctgggacaac tagggctgcg aatctagagg agggggcagg ctgagggtcg tgggaaaggg
gagtaggtgg gggaacactg agaaagaggc agggacctaa agggactacc tctgtgcctt
gccacattaa attgataaca tggaaatgaa aaaaaaaaaa aaaa
NP_057686.2 mgteatequ wghysgdeed aysaeplpel cykadvqafs rafqpsvslt vaalglagng
lvlathlaar raarsptsah adll laltlpfaaa galqgwslgs sgly
ary amino sasfhagflf lacisadryv aiaralpagp rpstpgrahl vsvivwllsl llalpallfs
acid sequence for
ngqregqrr crlifpeglt qtvkgasava qvalgfalpl gvmvacyall grtllaargp
human CCRIO
errralrvvv alvaafvvlq lpyslallld tadllaarer scpaskrkdv allvtsglal
precursor
arcglnpvly aflglrfrqd lrrllrggsc psgpqprrgc sscs aptethslsw
P460923 mgteatequ wghysgdeed aysaeplpel cykadvqafs rafqpsvslt vaalglagng
laar raarsptsah llqlaladll laltlpfaaa galqgwslgs atcrtisgly
Exemplary amino sasfhagflf lacisadryv aiaralpagp rpstpgrahl vsvivwllsl llalpallfs
acid ce for
ngqregqrr crlifpeglt qtvkgasava qvalgfalpl gvmvacyall grtllaargp
human CCRIO
errralrvvv vvlq lpyslallld tadllaarer scpaskrkdv allvtsglal
arcglnpvly aflglrfrqd lrrllrggsc psgpqprrgc prrprlsscs aptethslsw
NM_005201.3 tttgtagtgg acct ccagagaggc tcat tgagctgcac tcacatgagg
atacagactt tgtgaagaag gaattggcaa cactgaaacc acaa aggctgtcac
Exemplary nucleic taaggtcccg Ctgccttgat ggattataca cttgacctca gtgtgacaac agtgaccgac
GenBank
Accession
Nnnflmrand Sequence
Description
acid sequence tactactacc ctgatatct ctcaagcccc tgtgatgcgg aac:tattca gacaaatggc
encoding human aagt :gc ZCC ttgctgtct ttattgcc;c ctgtttgtat :Cagtcttct gggaaacagc
CCR8 Ctgg :ca :CC :Ccttg gg;ctgcaag aagctgagga gca2cacaga tgtatacctc
ttgaacc 399 cc:gcttt tcct :cccctttca gacctac :at
Ctgc :ggacc tgggactg atgtgcaaag :gg;gtctgg Cttttat :ac
attggct :Ct gt;tttca accctcatga gtg;ggacag gtacctggct
gttg :ccatg cc:aaagg aggacgatca gga:gggcac aacgctg :gc
Ctggcag :at ca2tatggct accatcccat :gc;agtgtt ttaccaagtg
gcctctgaag acagtgttat tcattt :aca agac tttgaag 199
aaga :ct :ca aa:gaaca:t ttaggc :tgt :ga:cccatt caccatc :tt
atgt :Ctgct cc;gcaccag ctgaagaggt gtcaaaacca caacaagacc
aaggcca :Ca ca;tgtgg;c attgca :ctt :ac;tttctg ggtccca :tc
aacg 399 :tc ttccttgcac agtatgcaca :ct:ggatgg atgtagcata
agccaacagc caccca:g;c atca :ttcctttac tcactgc :gt
gtgaaccctg tt;tgt;ggg gagaag :tca agaaacacct ctcagaaata
tttcagaaaa caac tacctaggaa gacaaatgcc tagggagagc
tgtgaaaagt ccagcagcac tcc:cccgtt cctccagcgt agactacatt
ttgtgaggat :gaagac ;aaa aaacat :ttc ttgaatggca tgctagtagc
agtgagcaaa ggtgtgggtg tgaaaggttt ccaaaaaaag ttcagcatga aggatgccat
atatgttgtt gccaacactt ggaacacaat atagttgtgc atgcctggca
caacatcaag attg tgttta;tga caagtggtaa Ctttaaagga
atgc caagtgaaaa atgt t
BCH07159J Ctttgtgaag aaggaattgg caacac;gaa ctgt cactaaggtc
cctt ga :ggattat gacc aacagtgacc gactactact
Exemplary nucleic accctgatat ct :thaagc ccctgtgatg tcagacaaat ggcaagt :gc
acid sequence
:Ccttgctgt Ct :ttattgc 0 :Cctg;ttg aaac agcctgg :ca
encoding human
:cctgg :Cct t9 399 :ctgc magaagctga agatgtatac ctcttgaacc
CCRS
:ggccc :gtc tgacc :gctt fi' :tgtc2tct tcagacctac :atctgc 399
accagtgggt gt :tgggact 0 :aatg;gca tggcttttat :acattggct
:ctacagcag ca :gt :tttc m :caccctca caggtacctg g ICC
atgccg :gta tgccc :aaag m :gaggacga cacaacgctg :gcctggcag
:atggc :aac cgcca :tatg mCtaccatcc gttttaccaa gtggcctctg
aagatggtgt tc :acagtgt r* attcattt; gactttgaag :ggaaga :ct
:caccaactt caaaa :gaac m :tttaggc: attcaccatc :ttatgt :ct
gctaca :taa aa ZCC :gcac 0agctgaaga ccacaacaag accaaggcca
:caggt :ggt gC :ca :tgtg (Q :cattgca; ctgggtccca :tcaacg 399
:tcttt :cct cacttccttg 0acagtatgc tggatgtagc caac
agctgactta tgccacccat m :cacagaaa tactcactgc :gtgtgaacc
ctgtta :cta tgctt :tgtt ggggagaag; tcaagaaaca cctctcagaa caga
aaagttgcag ccaaa :cttc aactacctag gaagacaaat ggag agctgtgaaa
agtcatcatc Ctgccagcag cactcctccc ccag Cgtagactac attttgtgag
gatcaa :gaa gactaaatat aaaaaacat; ttcttgaatg gcatgctagt agcagtgagc
aaaggtgtgg gtgtgaaagg tttccaaaaa aagttcagca atgc cgtgtgtgtt
gttgccaaca Cttggaacac gatgactggg gacgtggttg tgcatgcctg gcacaacatc
aagcctgtga ttgtgtttat tgt; gaacaagtgg tggctttgga ggattctgta
tgccaagtga aaggggagat gtctgacctc cttcatatag
GenBank
Accession
and Sequence
ption
NP_005192.1 mdytldlsvt tvtdyyypdi fsspcdaeli llav fycllfvfsl lgnslvilvl
vvckklrsit dvyllnlals dllfvfsfpf qtyylldqu fgtvmckvvs gfyyigfyss
Exemplary amino mffitlmsvd rylavvhavy irmg ttlclavwlt aimatipllv fyqvasedgv
acid sequence for
lq0ysfynqq tlkwkiftnf kmnilgllip ftifmfcyik ilhqlkrcqn hnktkairlv
human CCR8
livviasllf vafnvvlfl tslhsmhild gcsisqqlty athvteiisf thccvnpviy
afvgekfkkh lseiquscs grqm presceksss cqqhssrsss vdyil
AAIO7 160. l mdytldlsvt tvtdyyypdi fsspcdaeli qtngklllav fycllfvfsl lgnslvilvl
vvckklrsit lals dllfvfsfpf qtyylldqu fgtvmckvvs gfyyigfyss
Exemplary amino mffitlmsvd havy alkvrtirmg ttlclavwlt pllv fyqvasedgv
acid sequence for
qustynqq tlkwkiftnf kmnilgllip ftifmfcyik ilhqlkrcqn hnktkairlv
human CCR8
sllf vafnvvlfl tslhsmhild gcsisqqlty a;hvteiisf thccvnpviy
precursor
afvgekfkkh lseiquscs qifnylgrqm presceksss cqqhssrsss deil
NM_005508.4 gctcacagga agccacgcac ccttgaaagg caccgggtcc :Cttagca cgtgcttcct
gagcaagcct ggcattgcct cacagacctt cctcagagcc ctttcagaa aagcaagctg
Exemplary nucleic Cttctggttg ggcccagacc tgccttgagg agcctgtaga :taaaaaa gaaccccacg
acid sequence
gatatagcag acaccaccct Cgatgaaagc agca LQLQOFT'QJWOLQSDLQLQW :tatactga:tactatc gtatgaaagt
encoding human
atccccaagc cttgcaccaa agaaggcatc aaggcatttg ggagctct cctgccccca
CCR4
Ctgtattcct ttgt atttggtctg cttggaaatt :gtggtgg tctggtcczg
ttcaaataca agcggctcag gtccatgact gatgtgtacc gctcaacc tgccatctcg
gatc:gctct tcgtgttttc cctccctttt tggggctact aga ccagtggg:t
tttgggctag gcaa gatgatttcc tggatgtact LOLO fl. LOLOLO0 fl. :acagtggc
atattctttg tcatgctcat gagcattgat ctgg aattgtgca gcggtgt
tcct:gaggg caaggacctt gacttatggg gtcatcacca :ttggctac :ggtcag
gctg:gttcg cctcccttcc tctg ttcagcactt cat
acctactgca aaaccaagta aac tccacgacgt ggaaggttct agctccc
gaaa:caaca ttctcggatt gg:gatcccc ttagggatca tgctgttttg :actcca
atca:cagga ccttgcagca :tgtaaaaat gagaagaaga acaaggcggt aagatga
tttgccgtgg tggtcctctt gttc tggacacctt acaacatagt ctcttcc
gagaccctgg tggagctaga ag;ccttcag gactgcacct ttgaaagata :tggactat
gcca:ccagg ccacagaaac :c;ggctttt gttcactgct atcc atcatctac
ttttttctgg gggagaaatt :Cgcaagtac atcc;acagc tcttcaaaac :gcaggggc
cttt:tgtgc tctgccaata ctgtgggctc ctccaaattt actctgctga acccccagc
tcatcttaca Cgcagtccac ca;ggatcat gatc:ccatg atgctctgta aaaaatgaa
atggtgaaat gcagagtcaa :gaactttcc acat;cagag Cttacttaaa SDLQOQOOLQLQOOLQQIOFT‘ ttt
agtaagagat tcctgagcca gtgtcaggag gaaggcttac acccacagtg gaaagacagc
ttctcatcct gcaggcagct :tztctctcc cactagacaa gtccagcctg gcaagggttc
acctgggctg cctt CC :cacacca ggct;gcctg caggcatgag tcagtctgat
gagaactctg agcagtgctt gaatgaagtt gtaggtaata ttgcaaggca aagactattc
ccttctaacc gatg ggzttctcca gagggaattg cagagtactg ggag
taaatcgcta ccttttgctg tggcaaatgg gccc;ct
P5 1679.1 mnptdiadtt ldesiysnyy lyesipkpct kegi<afgel flpplyslvf vfgllgnsvv
ykrl rsmtdvylln laisdllfvf slpfwgyyaa dqufglglc kmiswmylvg
Exemplary amino fysgiffvml msidrylaiv havfslrart ltygvitsla twsvavfasl pgflfstcyt
acid sequence for
ernhtycktk yslnsttwkv lssleinilg lviplgimlf cysmiirth hcknekknka
human CCR4
vkmifavvvl flgfwtpyni vlfletlvel evlqdctfer yldyaiqate tlafvhccln
WO 09668
GenBank
Accession
Number and Sequence
Description
pmcumor lgek qlfk tcrglfvlcq ycgllqiysa dtpsssytqs tmdhdlhdal
N14 6091 aatcatccga gaaccttgga gggtggacag tttt acagatgaga aaactgaggc
ttgaagggga gaagcagctg cctctggcgg catggcttct ggctgcagga tgcccatgga
ExenqflaU’HUdem gttcgtggtg accctaggcc tgtgtctcgg cttcctttgc tgaacttgaa caggaagatg
acid ce
gcagtggggg ccagtggtct agaaggagat aagatggctg gtgccatgcc tctgcaactc
ng human
ctcctgttgc tgatcctact gggccctggc aacagcttgc agctgtggga cacctgggca
gatgaagccg cctt gggtcccctg cttgcccggg accggagaca ggccaccgaa
tatgagtacc tagattatga tttcctgcca gaaacggagc ctccagaaat gctgaggaac
agcactgaca ccactcctct gactgggcct ggaacccctg agtctaccac tgtggagcct
gctgcaaggc ctgg cctggatgca ggaggggcag tcacagagct gaccacggag
ctggccaaca tggggaacct gtccacggat tcagcagcta taca gaccactcaa
ccagcagcca cggaggcaca gaccactcaa ccagtgccca cggaggcaca gaccactcca
ctggcagcca cagaggcaca gacaactcga ctgacggcca cggaggcaca gaccactcca
ctggcagcca cagaggcaca gaccactcca ccagcagcca cggaagcaca gaccactcaa
cccacaggcc tggaggcaca gaccactgca ccagcagcca tggaggcaca gaccactgca
ccagcagcca caca gaccactcca ccagcagcca tggaggcaca gaccactcaa
accacagcca tggaggcaca gaccactgca ccagaagcca cggaggcaca gaccactcaa
gcca cggaggcaca gaccactcca ctggcagcca tggaggccct gtccacagaa
cccagtgcca cagaggccct gtccatggaa acca aaagaggtct gttcataccc
ttttctgtgt cctctgttac tcacaagggc attcccatgg cagccagcaa tttgtccgtc
aactacccag cccc agaccacatc tctgtgaagc tgct ggccatccta
atcttggcgc tggtggccac tatcttcttc gtgtgcactg tggtgctggc cctc
tcccgcaagg gccacatgta ccccgtgcgt tccc ccaccgagat ggtctgcatc
tcatccctgt tgcctgatgg ggg:gagggg ccctctgcca cagccaatgg gggcctgtcc
aaggccaaga gcccgggcct gacgccagag gagg accgtgaggg ggatgacctc
accctgcaca gcttcctccc ttagctcact ctgccatctg ttttggcaag accccacctc
cacgggctct cctgggccac ccc:gagtgc ccagacccca ttccacagct ctgggcttcc
tcggagaccc ctggggatgg gga;cttcag ggaaggaact accc aaacaggaca
agagcagcct ggggccaagc agacgggcaa gtggagccac thtttcctc cctccgcgga
tgaagcccag ccacatttca gccgaggtcc aaggcaggag gccatttact tgagacagat
tctctcct;t ttcctgtccc cca;cttctc tgggtccctc taacatctcc catggctctc
cccgcttc;c ctggtcactg gag;ctcctc cccatgtacc caaggaagat cccc
catcccacac gcactgcact gccattgtct tttggttgcc atggtcacca aacaggaagt
ggacattc;a agggaggagt actgaagagt gacggacttc tgaggctgtt tcctgctgct
cctctgac;t ggggcagctt ggg;cttctt gggcacctct Ctgggaaaac ccagggtgag
gttcagcczg tgagggctgg gatgggtttc gtgggcccaa gggcagacct ttctttggga
Ctgtgtggac caaggagctt cca2ctagtg acaagtgacc cccagctatc gcctcttgcc
ttcccctg ttcc agggtggact ctgtcttgtt cactgcagta tcccaactgc
aggtccag ataa ata:gtgatg gacaaacgat agcggaatcc ttcaaggttt
caaggctg tccttcaggc agccttcccg gaattctcca tccctcagtg caggatgggg
gctggtcc agctgtctgc cctcagcccc tggcccccca ggaagcctct ttcatgggct
gttaggttga cttcagtttt gcc:cttgga gggg tcttgtacat ccttgggtga
ccaggaaaag ttcaggctat ggggggccaa agggagggct gccccttccc caccagtgac
GenBank
Accession
Number and ce
Description
cactttattc cacttcctcc attacccagt tttggcccac tggt cccccccaaa
acca atatccctct aaacatcaat ctatcctcct gttaaagaaa aaaaaaaa
N14 0030064 acacacagcc attgggggtt gctcggatcc gggactgccg cagggggtgc cacagcagtg
cctggcagcg tgggctggga ccttgtcact aaagcagaga agccacttct tctgggccca
ExenqflaU7HUd€m Cgaggcagct gtcccatgct Ctgctgagca cggtggtgcc atgcctctgc aactcctcct
acid sequence
gttgctgatc ctactgggcc ctggcaacag cttgcagctg tgggacacct gggcagatga
encoding human
gaaa gccttgggtc ccctgcttgc ccgggaccgg agacaggcca ccgaatatga
agat ttcc tgccagaaac ggagcctcca gaaatgctga ggaacagcac
tgacaccact cctctgactg ggcctggaac ccctgagtct gtgg agcctgctgc
aaggcgttct actggcctgg atgcaggagg ggcagtcaca acca cggagctggc
gggg aacctgtcca ngattcagc agctatggag atacagacca ctcaaccagc
ggag gcacagacca ctcaaccagt gcccacggag gcacagacca ctccactggc
agccacagag gcacagacaa ctcgactgac ggccacggag acca ctccactggc
agccacagag gcacagacca ctccaccagc agccacggaa gcacagacca ctcaacccac
aggcctggag gcacagacca ctgcaccagc ggag gcacagacca ctgcaccagc
agccatggaa gcacagacca ctccaccagc agccatggag gcacagacca ctcaaaccac
agccatggag gcacagacca ctgcaccaga agccacggag gcacagacca ctcaacccac
agccacggag gcacagacca ctccactggc agccatggag gccctgtcca cagaacccag
tgccacagag gccctgtcca ctac taccaaaaga ggtctgttca tacccttttc
tgtgtcctct gttactcaca agggcattcc catggcagcc agcaatttgt ccgtcaacta
cccagtgggg gccccagacc acatctctgt gaagcagtgc ctgctggcca tcctaatctt
ggcgctggtg gccactatct :Cttcgtgtg cactgtggtg Ctggcggtcc gcctctcccg
caagggccac cccg :gcgtaatta ctcccccacc gagatggtct gcatctcatc
cctgttgcct gatgggggtg aggggccctc tgccacagcc aatgggggcc tgtccaaggc
caagagcccg ggcctgacgc cagagcccag ggaggaccgt gagggggatg ccct
gcacagcttc thccttagc :Cactctgcc atctgttttg gcaagacccc acctccacgg
gctctcctgg gccacccctg agtgcccaga ccccattcca cagctctggg cttcctcgga
gacccctggg gatc :tcagggaag gaactctggc cacccaaaca ggacaagagc
agcctggggc caagcagacg ggcaagtgga gccacctctt tcctccctcc gaag
caca tttcagccga ggtccaaggc aggaggccat ttacttgaga ctct
cctttttcct gtcccccatc :tctctgggt aaca tctcccatgg ctctccccgc
ttctcctggt cactggagtc :Cctccccat aagg aagatggagc atcc
cacacgcact gcactgccat :gtcttttgg ttgccatggt caccaaacag gaagtggaca
ttctaaggga ggagtactga agagtgacgg acttctgagg ctgtttcctg ctgctcctct
gacttggggc agcttgggtc :tcttgggca cctctctggg aaaacccagg gtgaggttca
gcctgtgagg gctgggatgg gtttcgtggg cccaagggca gacctttctt tgggactgtg
tggaccaagg agcttccatc :agtgacaag tgacccccag ctatcgcctc ttgccttccc
Ctgtggccac tttccagggt ggactctgtc ttgttcactg cagtatccca actgcaggtc
cagtgcaggc aataaatatg :gatggacaa acgatagcgg aatccttcaa ggtttcaagg
ctgtctcctt caggcagcct :cccggaatt ctccatccct cagtgcagga tgggggctgg
tcctcagctg tctgccctca gcccctggcc ccccaggaag cctctttcat gggctgttag
gttgacttca gttttgcctc :tggacaaca gggggtcttg tacatccttg cagg
aaaagttcag gctatggggg gccaaaggga gggctgcccc ttccccacca gtgaccactt
tattccactt ttac ccagttttgg cccacagagt ttggtccccc ccaaacctcg
gaccaatatc aaca tatc ctcctgttaa agaaaaaaaa aaa
NP 0011935381 1 mavgasgleg dkmagamplq lllllillgp gnslqlwdtw adeaekalgp llardrrqat
Number and Sequence
Description. .
eyeyldydfl peteppemlr nstdttpltg pgtpesttve paarrstgld aggavteltt
Exenqflaqzannno elanmgnlst dsaameiqtt qpaateaqtt qpvpteaqtt plaateaqtt rltateaqtt
addsequencefbr plaateaqtt ppaateaqtt qptgleaqtt apaameaqtt aqtt ppaameaqtt
hunuHICLA.
qttameaqtt apeateaqtt qptateaqtt plaamealst epsatealsm epttkrglfi
pecumo1’ 1‘
pfsvssvthk gipmaasnls vnypvgapdh isvchllai lilalvatif lavr
lsrkghmypv rnysptemvc issllpdgge gpsatanggl gltp epredregdd
ltlhsflp
42 NP 0029972 mplqllllli llgpgnslql wdtwadeaek algpllardr rqateyeyld ydflpetepp
emlrnstdtt pltgpgtpes ttvepaarrs tgldaggavt elttelanmg nlstdsaame
Exenqflao’anfino iqttqpaate aqttqpvpte aqttplaate aqttrltate aqttplaate aqttppaate
uencefbr aqttQPtg1e a ttag Paame aqtta aameP aqttPPaame aqttqttame aqttaPeate
hu CLA.
aqttqptate aqttplaame alstepsate alsmepttkr glfipfsvss Vthkgipmaa
pmcumor
snlsvnypvg apdhisvch llaililalv atiffvctvv lavrlsrkgh yspt
emvcissllp dggegpsata ngglskaksp redr egddltlhsf 1p
.3.6. Polynucleotide for Generating CAR and/or Homing Receptor
Described herein are polynucleotide sequences (326., nucleic acid sequences) that
encode the chimeric receptors and homing receptors. The polynucleotides may be contained
within any polynucleotide vector suitable for the transformation of immune cells, e.g., NK cells.
For example, NK cells may be transformed using synthetic vectors, lentiviral or retroviral
vectors, autonomously replicating ds, a virus (e.g., a retrovirus, lentivirus, adenovirus, or
herpes virus), or the like, containing polynucleotides ng the first and second polypeptides
(e.g., chimeric receptors). Lentiviral vectors suitable for ormation ofNK cells include, but
are not d to, e.g, the lentiviral vectors described in US. Patent Nos. 5,994,136; 6,165,782;
6,428,953, 7,083,981; and 299, the disclosures of which are hereby incorporated by
reference in their entireties. HIV vectors le for transformation ofNK cells include, but are
not limited to, e.g., the vectors bed in US. Patent No. 5,665,577, the disclosure of which is
hereby incorporated by reference in its entirety.
[003 53] Nucleic acids useful in the production of the polypeptides descn'bed herein, e.g.,
within a NK cell, include DNA, RNA, or nucleic acid analogs. Nucleic acid analogs can be
modified at the base , sugar moiety, or ate backbone, and can include deoxyuridine
substitution for deoxythymidine, 5-methyl-2'—deoxycytidine or 5-bromo-2'—deoxycytidine
substitution for deoxycytidine. Modifications of the sugar moiety can include modification of the
2' hydroxyl of the ribose sugar to form 2'—O-methyl or 2'—O-allyl sugars. The ibose
phosphate ne can be d to produce morpholino nucleic acids, in which each base
moiety is linked to a six membered, lino ring, or peptide c acids, in which the
deoxyphosphate backbone is replaced by a pseudopeptide backbone and the four bases are
retained. See, for example, Summerton and Weller (1997) Antisense Nucleic Acid Drug Dev.
7: 187-195, and Hyrup et al. (1996) Bioorgan. Med. Chain. 4:5-23. In addition, the
deoxyphosphate backbone can be replaced with, for example, a phosphorothioate or
orodithioate backbone, a phosphoroamidite, or an alkyl phosphotriester backbone.
[003 54] A nucleic acid encoding a polypeptide described herein may be uced into host
cells as part of a vector, such as, e.g., an expression vector. In addition, a polypeptide described
herein may be produced by transfecting a host cell with a nucleic acid encoding such a
polypeptide, and such nucleic acid may be part of a vector. In a c embodiment, the vector
is an expression vector that is capable of directing the expression of a nucleic acid encoding a
polypeptide described herein. Non-limiting examples of expression vectors include, but are not
limited to, ds and viral vectors, such as replication defective retroviruses, adenoviruses,
adeno—associated viruses, Newcastle e virus, ia virus and baculoviruses. Standard
molecular biology techniques may be used to introduce a nucleic acid ng a polypeptide
bed herein into an expression vector.
An expression vector comprises a nucleic acid encoding a polypeptide described
herein in a form le for expression of the nucleic acid in a host cell or non-human subject.
In a specific embodiment, an expression vector includes one or more regulatory sequences,
selected on the basis of the host cells to be used for expression, which is operably linked to the
nucleic acid to be sed. Within an expression vector, "operably linked" is intended to mean
that a nucleic acid of interest is linked to the regulatory sequence(s) in a manner which allows for
expression of the nucleic acid (e.g., in an in vitro transcription/translation system or in a host cell
when the vector is introduced into the host cell). Regulatory sequences include promoters,
enhancers and other expression control elements (e.g., enylation signals). Regulatory
sequences include those which direct constitutive expression of a nucleic acid in many types of
host cells, those which direct expression of the nucleic acid only in certain host cells (e.g., tissue-
specific regulatory sequences), and those which direct the expression of the nucleic acid upon
stimulation with a particular agent (e.g., inducible regulatory sequences). It will be appreciated
by those skilled in the art that the design of the expression vector can depend on such s as,
e. g., the choice of the host cell to be transformed, the level of expression of protein desired, etc.
An expression vector can be introduced into host cells via conventional
transformation or ection techniques. Such techniques include, but are not limited to,
calcium phosphate or calcium chloride co-precipitation, DEAE-dextran-mediated transfection,
lipofection, and electroporation. Suitable methods for transforming or transfecting host cells can
be found in Sambrook et al,, 1989, Molecular Cloning - A Laboratory Manual, 2nd Edition, Cold
Spring Harbor Press, New York, and other tory manuals. In certain embodiments, a host
cell is ently transfected with an expression vector containing a nucleic acid encoding a
polypeptide described herein. In other embodiments, a host cell is stably transfected with an
expression vector ning a nucleic acid encoding a polypeptide bed herein.
] Cells containing any of the polynucleotide may be selected using one or more
selectable s.
.4. Methods of Treating Hematological Disorders or Solid Tumors
Provided herein are methods of treating a hematological disorder or a solid tumor
using NK cells or genetically modified NK cells (e.g., NK cells comprising a CAR and/or a
homing receptor) as described above.
.4.1. NK Combination Therapies
[003 59] In one aspect, provided herein are methods of treating a hematological disorder or a
solid tumor in a subject in need thereof, sing: (a) administering to said subject an isolated
population of natural killer (NK) cells or a pharmaceutical composition thereof, or an isolated
population of genetically modified NK cells (e.g., NK cells comprising a CAR and/or a homing
receptor) or a pharmaceutical composition thereof, and (b) administering to said subject a second
agent or a pharmaceutical composition thereof. The second agent can be any pharmaceutically
acceptable agent that can be used to treat the logical er or the solid tumor, and
includes, but is not limited to, an antibody (e.g., a monoclonal dy), a bispecific killer cell
engager (BiKE), an anti-inflammatory agent, an immunomodulatory agent (e.g., an
odulatory compound as described in section 5.2.7.1), a cytotoxic agent, a cancer
vaccine, a chemotherapeutic agent, an HDAC inhibitor, or an siRNA.
.4.1.1. NK Combinations with Antibodies
In certain embodiments, the second agent is an antibody or antigen—binding fragment
thereof.
As used herein, the terms “antibody” and “immunoglobulin” and “Ig” are terms of art
and can be used interchangeably herein and refer to a molecule with an antigen binding site that
specifically binds an antigen.
[003 62] Antibodies can include, for example, monoclonal antibodies, recombinantly produced
antibodies, monospeciflc antibodies, multispecific antibodies (including bispeciflc antibodies),
human antibodies, humanized dies, such as composite human antibodies or deimmunized
antibodies, murine antibodies (e.g., mouse or rat antibodies), chimeric antibodies, synthetic
antibodies, and tetrameric antibodies sing two heavy chain and two light chain les.
In specific ments, antibodies can include, but are not limited to an antibody light chain
monomer, an antibody heavy chain monomer, an antibody light chain dimer, an antibody heavy
chain dimer, an antibody light chain- antibody heavy chain pair, intrabodies, conjugate
antibodies, single domain antibodies, and monovalent antibodies. In a specific embodiment,
antibodies can include antigen—binding fragments or epitope binding fragments such as, but not
limited to, single chain antibodies or single-chain Fvs (scFv) (e.g., including monospeciflc,
bispecific, eta), camelized antibodies, affybodies, Fab fragments, F(ab’) fragments, F(ab’)2
fragments, and disulfide-linked Fvs (dev). In specific embodiments, dies described
herein refer to monoclonal antibodies.
Antibodies can be of any type (e.g., IgG, IgE, IgM, IgD, IgA or IgY), any class, (e.g.,
IgGl, Ing, IgG3, IgG4, IgA1 or IgAz), or any ss (e.g., Inga or Ingb) of globulin
le. In certain embodiments, antibodies descnbed herein are IgG antibodies, or a class
(e.g., human IgG1, Ing, or IgG4) or subclass thereof. In certain embodiments, antibodies
described herein are IgG2 antibodies (e.g., human IgG2) or a ss thereof (e.g., human IgG;a
or human Ingb, or a e thereof). In certain embodiments, antibodies described herein are
IgG1 antibodies (e.g., human IgG) or a ss thereof. In certain embodiments, IgG1
antibodies described herein comprise one or more amino acid substitutions and/or deletions in
the constant .
[003 64] As used herein, the term “monoclonal antibody” is a well known term of art that
refers to an antibody obtained from a population of homogenous or substantially homogeneous
2015/068069
antibodies. The term “monoclonal” is not d to any particular method for making the
antibody. Generally, a population of monoclonal antibodies can be ted by cells, a
population of cells, or a cell line. In specific embodiments, a “monoclonal antibody,” as used
herein, is an antibody produced by a single cell or cell line wherein the antibody
immunospecifically binds to an epitope as determined, e.g., by ELISA or other antigen-binding
or competitive binding assay known in the art. In particular embodiments, a monoclonal
antibody can be a chimeric antibody or a humanized antibody. In certain embodiments, a
onal antibody is a monovalent antibody or alent (e.g., bivalent) antibody.
In specific embodiments, the antibody or antigen—binding fragment thereof
specifically binds to a tumor-associated antigen (TAA), which is bed in Section 5.3.2. In a
further specific embodiment, the antibody or antigen-binding fragment thereof binds to CS—l. In
a more specific embodiment, the antibody or antigen-binding fragment thereof is elotuzumab, or
an antigen-binding fragment thereof. In a further specific embodiment, the antibody or antigen-
binding fragment thereof binds to CD20.
In specific embodiments, the antibody or antigen-binding fragment thereof
specifically binds to a tumor microenvironment-associated antigen (TMAA), which is bed
in Section 5.3.2.
[003 67] In specific embodiments, the antibody or antigen-binding fragment thereof
specifically binds to and antagonizes the activity of an immune checkpoint protein. In more
specific embodiments, the immune checkpoint n is CTLA-4, PD-l, PD-Ll, PD-L2, or
LAG-3. In more specific embodiments, the immune checkpoint-related protein is BTLA, KIR,
TIM-3, A2aR, B7-H3, or B7-H4. In other specific embodiments, the dy or antigen-
g fragment thereof specifically binds to and antagonizes the activity of a costimulatory
signaling n. In more specific embodiments, the costimulatory signaling protein is ICOS,
CD28, 4-1BB, 0X40, CD27, or CD40.
.4.1.2. NK Combinations with Bispecific Killer Cell Engagers
In certain embodiments, the second agent is a bispecific killer cell engager (BiKE).
[003 69] BiKEs are reagents that contain two single chain variable fragments (scFvs) and
specifically engage both target cells (e.g., tumor cells or infected cells) and NK cells to mediate
target cell g. They are used to colocalize target cells (e.g, tumor cells or infected cells) with
NK cells, and thereby triggering NK—cell mediated antibody—dependent cellular cytotoxicity
(ADCC). BiKEs can be generated by any method known in the art, for e, as described in
Gleanson, M. K, et a1., Mol Cancer Ther, 11: 2674-2684 (2012); Vallera, D. A., et al., Cancer
Biother Radiopharm, 28: 274-282 , Wiernik, A., et al., Clin Cancer Res, 19: 3844-3 855
; Reiners, K. S., et a1., Mol Ther, 21: 895-903 (2013); Singer, H., et al., J Immunother, 33:
599-608 (2010), or Gleason, M. K, et al., Blood, 123: 3016—3026 (2014). One scFv ofBiKE
specifically binds to an antigen on the surface of target cells (e.g., tumor cells or infected cells),
and the other scFv specifically binds to a receptor (e.g., an Fc receptor, such as CD16) on NK
cells.
In specific embodiments, the BiKE comprises a first scFv that specifically binds to a
TAA, which is described in Section 5.3.2. In further specific embodiments, the BiKE comprises
a second scFv that specifically binds to CD16.
.4.1.3. NK Combinations with Other Anti Cancer Agents
Other anticancer agents that can be administered as the second agent are well-known
in the art and e anti-inflammatory , immumodulatory agents, cytotoxic agents,
cancer vaccines, chemotherapeutics, HDAC tors, and siRNAs. Specific anticancer agents
that may be administered to an dual having cancer, e.g, an individual having tumor cells,
in addition to the NK cells produced using the methods described herein and optionally
perfusate, perfusate cells, natural killer cells other than NK cells produced using the methods
described herein include, but are not d to: acivicin, aclarubicin; acodazole hydrochloride,
acronine, adozelesin; adriamycin, adrucil, aldesleukin, altretamine, ambomycin, ametantrone
acetate; amsacrine; anastrozole; anthramycin; asparaginase (e.g., from Erwinia chrysan;
Erwinaze), asperlin, avastin (bevacizumab), azacitidine, azetepa, azotomycin, stat,
benzodepa; bicalutamide, bisantrene hydrochloride; bisnafide dimesylate; sin; bleomycin
sulfate; brequinar sodium, bropirimine, busulfan, cactinomycin, calusterone; caracemide,
carbetimer, latin; carmustine; carubicin hydrochloride, carzelesin, cedefingol; celecoxib
(COX—2 inhibitor), CC—l22; CC-486 (oral azacididine), Cerubidine; chlorambucil; cirolemycin,
cisplatin, cladribine, crisnatol mesylate, cyclophosphamide; cytarabine, dacarbazine;
dactinomycin; daunorubicin hydrochloride; decitabine; dexormaplatin; dezaguanine;
dezaguanine mesylate, diaziquone, docetaxel, doxorubicin, bicin hydrochloride,
ifene; ifene citrate; dromostanolone propionate; duazomycin; edatrexate;
eflomithine hydrochloride, elsamitrucin, Elspar, enloplatin; enpromate, epipropidine, epirubicin
hloride; erbulozole; esorubicin hydrochloride; estramustine; estramustine phosphate
sodium; etanidazole; etoposide; etoposide phosphate; hos; etoprine; fadrozole
hloride; fazarabine; fenretinide; floxuridine; fludarabine phosphate; fluorouracil;
flurocitabine; fosquidone; fostriecin sodium; gemcitabine; gemcitabine hydrochloride;
hydroxyurea; Idamycin; idarubicin hydrochloride; ifosfamide; ilmofosine; iproplatin; irinotecan;
irinotecan hydrochloride; tide acetate; lenalidomide; letrozole; leuprolide acetate; liarozole
hloride; lometrexol sodium; lomustine; losoxantrone hydrochloride; masoprocol;
maytansine; mechlorethamine hydrochloride; rol acetate; melengestrol acetate;
melphalan; menogaril; mercaptopurine; methotrexate; methotrexate sodium; metoprine;
meturedepa; mitindomide; mitocarcin; mitocromin; mitogillin; mitomalcin; mitomycin;
mitosper; mitotane; mitoxantrone hydrochloride; enolic acid; nocodazole; nogalamycin;
ormaplatin; an; paclitaxel; pegaspargase; peliomycin; pentamustine; peplomycin sulfate;
perfosfamide; pipobroman; piposulfan; piroxantrone hydrochloride; plicamycin; plomestane;
pomalidomide; porf1mer sodium; porf1romycin; prednimustine; procarbazine hydrochloride;
Proleukin; Purinethol; puromycin; puromycin hydrochloride; pyrazofurin; Rheumatrex;
riboprine; safmgol; safingol hydrochloride; semustine; simtrazene; sparfosate sodium;
sparsomycin; spirogermanium hloride; spiromustine; spiroplatin; onigrin;
streptozocin; nur; Tabloid; mycin; tecogalan sodium; taxotere; tegafur; teloxantrone
hydrochloride; temoporf1n; teniposide; teroxirone; testolactone; omide; thiamiprine;
thioguanine; thiotepa; tiazofurin; tirapazamine; Toposar; toremifene e; trestolone acetate;
Trexall; triciribine phosphate; trimetrexate; trimetrexate glucuronate; triptorelin; tubulozole
hydrochloride; uracil mustard; uredepa; vapreotide; verteporfln; Vinblastine sulfate; Vincristine
sulfate; Vindesine; Vindesine sulfate; Vinepidine sulfate; Vinglycinate sulfate; rosine
e; Vinorelbine tartrate; Vinrosidine sulfate; idine e; vorozole; atin;
zinostatin; and zorubicin hydrochloride.
[003 72] Other anti-cancer drugs include; but are not limited to: 20-epi-l;25 oxyvitamin
D3; 5-ethynyluracil; abiraterone; aclarubicin; acylfulvene; adecypenol; adozelesin; aldesleukin;
ALL-TK antagonists; altretamine; ambamustine; amidox; amifostine; aminolevulinic acid;
amrubicin; amsacrine; anagrelide; anastrozole; andrographolide; angiogenesis inhibitors;
antagonist D; antagonist G; antarelix; anti-dorsalizing morphogenetic protein-1; antiandrogen;
prostatic carcinoma; antiestrogen; antineoplaston; nse oligonucleotides; aphidicolin
2015/068069
glycinate; apoptosis gene modulators; apoptosis regulators; apurinic acid; ara-CDP-DL-PTBA;
arginine deaminase; asulacrine; tane; stine; axinastatin l; tatin 2; axinastatin
3; azasetron; azatoxin; osine; in III derivatives; balanol; batimastat; BCR/ABL
antagonists; benzochlorins; benzoylstaurosporine; beta lactam derivatives; beta-alethine;
betaclamycin B; betulinic acid; bFGF inhibitor; tamide; bisantrene; bisaziridinylspermine;
bisnafide; bistratene A; sin; breflate; bropirimine; budotitane; buthionine sulfoximine;
calcipotriol; calphostin C; camptosar (also called ; irinotecan) camptothecin derivatives;
capecitabine; carboxamide-amino-triazole; carboxyamidotriazole; CaRest M3; CARN 700;
cartilage derived inhibitor; carzelesin; casein kinase inhibitors ; castanospermine;
cecropin B; elix; chlorlns; chloroquinoxaline sulfonamide; cicaprost; cis-porphyrin;
cladribine; clomifene analogues; mazole; collismycin A; collismycin B; combretastatin A4;
combretastatin analogue; conagenin; crambescidin 816; crisnatol; cryptophycin 8; cryptophycin
A tives; curacin A; cyclopentanthraquinones; cycloplatam; cypemycin; cytarabine
ocfosfate; cytolytic factor; cytostatin; dacliXimab; decitabine; dehydrodidenmin B; deslorelin;
dexamethasone; dexifosfamide; dexrazoxane; dexverapamil; diaziquone; didemnin B; didox;
diethylnorspermine; dihydro-S—azacytidine; dihydrotaxol; 9-; dioxamycin; diphenyl
spiromustine; docetaxel; docosanol; dolasetron; doxifluridine; doxorubicin; droloxifene;
dronabinol; duocarmycin SA; ebselen; ecomustine; edelfosine; edrecolomab; eflornithine;
elemene; emitefur; epirubicin; epristeride; estramustine analogue; estrogen agonists; estrogen
antagonists; etanidazole; etoposide phosphate; exemestane; fadrozole; fazarabine; inide;
fllgrastim; finasteride; flavopiridol; flezelastine; fluasterone; fludarabine (e.g; Fludara);
fluorodaunorunicin hloride; forfenimex; forrnestane; fostriecin; fotemustine; gadolinium
texaphyrin; gallium nitrate; galocitabine; ganirelix; gelatinase inhibitors; gemcitabine;
glutathione inhibitors; hepsulfam; heregulin; hexamethylene bisacetamide; hypericin; ibandronic
acid; idarubicin; ene; idramantone; ilmofosine; ilomastat; imatinib (e.g.; GLEEVEC®);
imiquimod; immunostimulant peptides; insulin-like growth factor-1 or inhibitor; interferon
agonists; interferons; interleukins; iobenguane; iododoxorubicin; ipomeanol; 4-; iroplact;
irsogladine; isobengazole; isohomohalicondrin B; itasetron; jasplakinolide; kahalalide F;
lamellarin-N triacetate; lanreotide; leinamycin; lenograstim; lentinan sulfate; leptolstatin;
letrozole; leukemia inhibiting factor; leukocyte alpha interferon; lide + estrogen +
progesterone; leuprorelin; levamisole; liarozole; linear polyamine analogue; lipophilic
disaccharide peptide; lipophilic platinum compounds; lissoclinamide 7; lobaplatin; cine;
lometrexol; lonidamine; ntrone; bine; lurtotecan; lutetium texaphyrin; lysofylline;
lytic peptides; maitansine; tatin A; marimastat; masoprocol; maspin; matrilysin
inhibitors; matrix metalloproteinase inhibitors; menogaril; merbarone; meterelin; methioninase;
metoclopramide; MIF inhibitor; mifepristone; miltefosine; mirimostim; mitoguazone; mitolactol;
mitomycin analogues; mitonafide; mitotoxin fibroblast growth factor-saporin; ntrone;
mofarotene; molgramostim; anti-EGFR antibody (e.g; Erbitux (cetuximab)); anti-CD19
antibody; anti-CD20 antibody (e.g.; rituximab); anti-disialoganglioside (GD2) dy (e.g.;
monoclonal antibody 3F8 or chl4>l8); anti-ErbBZ antibody (e.g.; herceptin); human chon'onic
gonadotrophin; monophosphoryl lipid A+myobacterium cell wall sk; mopidamol; mustard
ncer agent; mycaperoxide B; mycobacterial cell wall extract; orone; N—
acetyldinaline; N—substituted ides; nafarelin; nagrestip; naloxone+pentazocine; napavin;
naphterpin; nartograstim; atin; nemorubicin; onic acid; nilutamide; cin; nitric
oxide modulators; nitroxide antioxidant; nitrullyn; oblimersen (GENASENSE®); O6-
benzylguanine; octreotide; okicenone; oligonucleotides; onapristone; ondansetron; ondansetron;
oracin; oral ne inducer; ormaplatin; osaterone; oxaliplatin (e.g.; Floxatin); oxaunomycin;
paclitaxel; paclitaxel analogues; paclitaxel derivatives; palauamine; palmitoylrhizoxin;
pamidronic acid; panaxytriol; panomifene; parabactin; pazelliptine; pegaspargase; peldesine;
pentosan polysulfate sodium; pentostatin; pentrozole; perflubron; perfosfamide; perillyl alcohol;
inomycin; phenylacetate; phosphatase tors; picibanil; pilocarpine hydrochloride;
pirarubicin; exim; placetin A; in B; plasminogen activator inhibitor; platinum
complex; platinum compounds; platinum-triamine complex; porfimer sodium; porfiromycin;
prednisone; propyl bis—acridone; prostaglandin J2; proteasome inhibitors; protein A—based
immune modulator; n kinase C inhibitor; protein kinase C inhibitors; microalgal; protein
tyrosine phosphatase inhibitors; puiine nucleoside phosphorylase inhibitors; purpurins;
pyrazoloacridine; pyridoxylated hemoglobin polyoxyethylene conjugate; raf antagonists;
raltitrexed; ramosetron; ras famesyl protein transferase inhibitors; ras inhibitors; ras-GAP
inhibitor; retelliptine demethylated; rhenium Re 186 nate; rhizoxin; ribozymes; RII
retinamide; kine; romurtide; imex; rubiginone Bl; ruboxyl; safingol; saintopin;
SarCNU; sarcophytol A; sargramostim; Sdi 1 mimetics; semustine; senescence derived inhibitor
1; sense oligonucleotides; signal transduction inhibitors; sizofiran; sobuzoxane; sodium
borocaptate; sodium phenylacetate; solverol; somatomedin binding protein; sonermin; sparfosic
acid; spicamycin D; spiromustine; splenopentin; spongistatin l; squalamine; stipiamide;
stromelysin inhibitors; sulfinosine; superactive tive intestinal peptide nist;
sta; suramin; swainsonine; tallimustine; tamoxifen methiodide; tauromustine; tazarotene;
tecogalan sodium; tegafur; tellurapyrylium; rase inhibitors; temoporfin; side;
tetrachlorodecaoxide; tetrazomine; thaliblastine; thiocoraline; thrombopoietin; thrombopoietin
mimetic; thymalfasin; thymopoietin receptor agonist; thymotrinan; thyroid stimulating hormone;
tin ethyl etiopurpurin; tirapazamine; titanocene bichloride; topsentin; toremifene; ation
inhibitors; tretinoin; triacetyluridine; triciribine; trimetrexate; triptorelin; etron; turosteride;
tyrosine kinase inhibitors; tyrphostins; UBC inhibitors; ubenimex; urogenital sinus-derived
growth inhibitory factor; urokinase receptor antagonists; vapreotide; variolin B; Vectibix
(panitumumab)velaresol; veramine; verdins; verteporfin; Vinorelbine; Vinxaltine; VitaXin;
vorozole; Welcovorin (leucovorin); Xeloda (capecitabine); zanoterone; zeniplatin; zilascorb; and
atin stimalamer.
In a specific embodiment, the anticancer agent that is administered as the second
agent is thalidomide, lenalidomide, pomalidomide, CC-122; idine; decitabine or CC-486
(oral azacididine). In a more specific embodiment; the anticancer agent that is administered as
the second agent is lenalidomide or pomalidomide. In a specific embodiment; the anticancer
agent that is administered as the second agent is an odulatory compound (e.g.; an
immunmodulatory compound as described in section 5.2.7.1). In a specific embodiment; the
anticancer agent that is administered as the second agent is psin.
.4.2. Treatments Using Genetically Modified NK Cells
In another aspect, provided herein are methods of treating a hematological disorder or
a solid tumor in a t in need thereof; comprising administering to said t an isolated
population ofNK cells or a ceutical composition thereof; wherein the NK cells are
genetically d (e.g.; comprising a chimeric antigen receptor (CAR) and/or a homing
receptor; wherein said CAR comprises an extracellular domain; a transmembrane domain; an
intracellular stimulatory ; and ally a co-stimulatory domain).
The cally modified NK cells (e.g.; NK cells comprising a CAR and/or a homing
receptor) are described in Section 5.3.
.4.3. Hematological Disorders and Solid Tumors
[003 76] In specific embodiments, the hematological disorder is a hematological
hyperproliferative er. In specific embodiments, the hematological disorder is a
hematological cancer, e.g., a ia or a lymphoma. In more specific embodiments, the
hematological cancer is an acute leukemia, e.g., acute T cell leukemia, acute myelogenous
leukemia (AML), acute promyelocytic leukemia, acute myeloblastic leukemia, acute
megakaryoblastic leukemia, precursor B acute blastic leukemia, precursor T acute
lymphoblastic leukemia, Burkitt’s leukemia (Burkitt’s lymphoma), or acute biphenotypic
leukemia, a chronic leukemia, e.g., chronic myeloid lymphoma, chronic myelogenous leukemia
(CML), chronic monocytic leukemia, chronic lymphocytic leukemia (CLL)/Small lymphocytic
ma, or B-cell phocytic leukemia; hairy cell lymphoma; T-cell prolymphocytic
leukemia, or a ma, e.g., histiocytic lymphoma, plasmacytic lymphoma (e.g.,
Waldenstrom macroglobulinemia), splenic marginal zone ma, plasma cell neoplasm (e.g.,
plasma cell myeloma, plasmacytoma, a monoclonal globulin deposition disease, or a
heavy chain disease), extranodal marginal zone B cell lymphoma (MALT lymphoma), nodal
marginal zone B cell lymphoma (NMZL), follicular lymphoma, mantle cell lymphoma, diffuse
large B cell lymphoma, mediastinal (thymic) large B cell lymphoma, intravascular large B cell
lymphoma, y effusion lymphoma, T cell large granular lymphocytic leukemia, aggressive
NK cell ia, adult T cell leukemia/lymphoma, extranodal NK/T cell lymphoma, nasal type,
enteropathy-type T cell lymphoma, hepatosplenic T cell lymphoma, blastic NK cell lymphoma,
s fungoides (Sezary syndrome), a primary ous CD3 O-positive T cell
lymphoproliferative disorder (e.g., primary cutaneous anaplastic large cell lymphoma or
lymphomatoid papulosis), angioimmunoblastic T cell lymphoma, peripheral T cell lymphoma,
unspecified, stic large cell lymphoma, a Hodgkin’s lymphoma or a nodular lymphocytepredominant
Hodgkin’s lymphoma. In another specific embodiment, the hematological cancer is
acute myelogenous leukemia (AML). In another specific embodiment, the logical cancer
is chronic lymphocytic leukemia (CLL). In another c embodiment, the logical
cancer is multiple myeloma or myelodysplastic syndrome.
] The solid tumor can be, but is not limited to, e.g, a carcinoma, such as an
adenocarcinoma, an adrenocortical carcinoma, a colon adenocarcinoma, a colorectal
adenocarcinoma, a colorectal carcinoma, a ductal cell carcinoma, a lung carcinoma, a thyroid
2015/068069
carcinoma, a nasopharyngeal carcinoma, a melanoma (e.g., a malignant melanoma), a non-
melanoma skin carcinoma, or an unspecified carcinoma; a d tumor; a desmoplastic small
round cell tumor, an endocrine tumor, an Ewing sarcoma, a germ cell tumor (e.g., testicular
cancer, ovarian cancer, carcinoma, endoderrnal sinus tumor, germinoma, etc); a
hepatosblastoma, a hepatocellular oma; a neuroblastoma, a non-rhabdomyosarcoma soft
tissue sarcoma, an arcoma, a retinoblastoma; a rhabdomyosarcoma; or a Wilms tumor. In
another embodiment, the solid tumor is pancreatic cancer or breast cancer, In other
embodiments, the solid tumor is an acoustic neuroma; an astrocytoma (e.g., a grade I pilocytic
astrocytoma, a grade II low-grade astrocytoma; a grade III anaplastic astrocytoma; or a grade IV
glioblastoma multiforme), a ma, a craniopharyngioma, a glioma (e.g., a brain stem
glioma; an ependymoma; a mixed glioma; an optic nerve glioma; or a subependymoma); a
glioblastoma, a medulloblastoma, a meningioma, a metastatic brain tumor, an
oligodendroglioma; a pineoblastoma; a pituitary tumor; a primitive neuroectoderrnal tumor; or a
schwannoma. In another embodiment, the solid tumor is prostate .
In certain embodiments, the individual having a hematological cancer or a solid
tumor, e.g., an individual having a deficiency of natural killer cells, is an individual that has
received a bone marrow transplant before said stering. In certain embodiments, the bone
marrow lant was in treatment of said hematological cancer or said solid tumor. In certain
other embodiments, the bone marrow transplant was in treatment of a condition other than said
hematological cancer or said solid tumor. In certain ments, the individual received an
immunosuppressant in addition to said bone marrow transplant. In certain embodiments, the
individual who has had a bone marrow transplant exhibits one or more symptoms of graft-
versus—host disease (GVHD) at the time of said administration. In certain other embodiments,
the individual who has had a bone marrow transplant is administered said cells before a symptom
of graft-versus-host disease (GVHD) has manifested.
In certain specific ments, the individual having a hematological cancer or
solid tumor has ed at least one dose of a TNFOL inhibitor, e.g, ETANERCEPT® (Enbrel),
prior to said administering. In specific embodiments, said individual received said dose of a
TNFOL tor within 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 months of diagnosis of said
hematological cancer or said solid tumor. In a specific embodiment, the individual who has
received a dose of a TNFOL inhibitor exhibits acute myeloid leukemia. In a more specific
embodiment, the individual who has received a dose of a TNFOL inhibitor and exhibits acute
myeloid leukemia further exhibits deletion of the long arm of chromosome 5 in blood cells. In
r embodiment, the individual having a hematological cancer or solid tumor, for example, a
blood cancer, exhibits a Philadelphia chromosome.
In certain other embodiments, a hematological cancer or a solid tumor, in said
individual is refractory to one or more anticancer drugs. In a specific embodiment, the
hematological cancer or solid tumor is refractory to GLEEVEC® (imatinib mesylate).
In certain embodiments, a hematological cancer or a solid tumor, in said individual
responds to at least one anticancer drug; in this ment, placental perfusate, isolated
placental perfusate cells, isolated natural killer cells, e.g., placental natural killer cells, e.g.,
placenta-derived intermediate l killer cells, isolated combined natural killer cells, or
activated NK, or TSPNK cells described herein, and/or combinations thereof, and optionally an
immunomodulatory compound (e.g., an immunmodulatory compound as described in section
.2.7.1), are added as adjunct treatments or as a combination therapy with said anticancer drug.
In certain other embodiments, the individual having a hematological cancer or a solid tumor, has
been treated with at least one anticancer drug, and has relapsed, prior to said administering. In
certain ments, the individual to be treated has a tory cancer. In one embodiment,
the cancer treatment method with the cells described herein protects against (e.g., ts or
delays) relapse of cancer. In one embodiment, the cancer treatment method described herein
results in remission of the cancer for 1 month or more, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, or 12 months
or more, 1 year or more, 2 years or more, 3 years or more, or 4 years or more.
In certain embodiments, NK cells are isolated from a tumor lesion, e.g., are tumor-
infiltrating cytes; such NK cells are expected to be specific for a tumor-associated
antigen (TAA) or a tumor microenvironment—associated antigen (TMAA).
In one embodiment, provided herein is a method of treating an individual having
multiple a, comprising administering to the individual (1) lenalidomide or pomalidomide
and (2) CAR NK cells, wherein said CAR NK cells are effective to treat multiple myeloma in
said individual. In a specific embodiment, said CAR NK cells are cord blood NK cells, or NK
cells produced from cord blood hematopoietic cells, e.g., hematopoietic stem cells. In r
embodiment, said CAR NK cells have been ed by a two or stage method bed
herein for producing NK cells. In r embodiment, said lenalidomide or pomalidomide, and
CAR NK cells are administered separately from each other. In certain specific embodiments of
the method of treating an individual with multiple myeloma, said CAR NK cells comprise a
CAR extracellular domain, which ellular domain is a CS—l binding domain. In c
embodiments, the CS—l binding domain comprises an scFv or antigen-binding fragment of an
antibody that binds CS-l. In certain specific embodiments, the CS-l g domain comprises
a single-chain n of elotuzumab and/or an antigen-binding nt of elotuzumab.
In one embodiment, provided herein is a method of treating an dual having
multiple myeloma, comprising administering to the individual (1) lenalidomide or
pomalidomide, (2) umab; and (3) CAR NK cells, wherein said CAR NK cells are effective
to treat multiple myeloma in said individual. In a c embodiment, said CAR NK cells are
cord blood NK cells, or NK cells produced from cord blood hematopoietic cells, e.g,
hematopoietic stem cells. In another embodiment, said CAR NK cells have been produced by a
two or three-stage method described herein for producing NK cells. In another ment,
said lenalidomide or pomalidomide, elotuzumab, and/or CAR NK cells are administered
separately from each other. In certain specific embodiments of the method of treating an
individual with multiple myeloma, said CAR NK cells comprise a CAR extracellular domain,
which extracellular domain is a CS-l binding domain. In specific embodiments, the CS-l
binding domain comprises an scFv or antigen-binding fragment of an dy that binds CS-l.
In another embodiment, provided herein is a method of treating an individual having
a blood cancer (e.g., Burkitt’s lymphoma), comprising administering to the individual (1)
romidepsin and (2) CAR NK cells, wherein said CAR NK cells are effective to treat the blood
cancer (e.g., Burkitt’s lymphoma) in said individual. In certain specific embodiments of the
method of treating an individual with blood cancer (e.g., Burkitt’s ma), said CAR NK
cells se a CAR extracellular domain, which extracellular domain is a CD20 binding
domain. In c embodiments, the CD20 binding domain comprises an scFv or antigen-
binding fragment of an dy that binds CD20.
.5. Methods of Treating Infectious Diseases
Provided herein are methods of treating an infectious disease using NK cells or
genetically modified NK cells (e.g., NK cells comprising a CAR and/or a homing receptor) as
described above.
.5.1. Treatment of Infectious Diseases Using NK Combination Therapies
] In another aspect, provided herein are methods of treating an infectious disease in a
subject in need thereof, comprising: (a) administering to said subject an isolated population of
natural killer (NK) cells or a pharmaceutical ition thereof, or an isolated population of
genetically d NK cells (e.g., NK cells comprising a CAR and/or a homing receptor) or a
ceutical composition thereof; and (b) administering to said subject a second agent or a
pharmaceutical composition thereof. The second agent can be any pharmaceutically acceptable
agent that can be used to treat the infectious disease, and includes, but is not limited to, an
antibody (e.g, a monoclonal antibody), a bispecific killer cell engager (BiKE), or an antiviral
agent.
1. Antibodies that Binds to an Immune oint Protein
In certain ments, the second agent is an antibody or antigen—binding fragment
thereof (see Section 5.4.1.1 for description of antibodies). In specific embodiments, the antibody
specifically binds to and antagonizes activity of an immune oint protein, immune
checkpoint-related protein, or costimulatory signaling protein as described in Section 5.4.1.1.
.5.1.2. Bispecific Killer Cell Engager
In certain embodiments, the second agent is a BiKE, as described in Section 5.4.1.2.
.5.1.3. Antiviral Agent
[003 90] In certain embodiments, the second agent is an antiviral agent, which includes, but is
not limited to: mod, podofilox, podophyllin, interferon alpha (IFNOL), reticolos,
nonoxynol-9, acyclovir, famciclovir, valaciclovir, ganciclovir, cidofovir, amantadine,
rimantadine, ribavirin; zanamavir and oseltaumavir; protease inhibitors such as indinavir,
nelfinavir, ritonavir, or saquinavir, side reverse transcriptase inhibitors such as didanosine,
lamivudine, stavudine, zalcitabine, or zidovudine, or non-nucleoside reverse transcriptase
inhibitors such as nevirapine, or efavirenz.
.5.2. Treatment of ious Diseases Using Genetically Modified NK Cells
In another , provided herein are s of treating an infectious disease in a
subject in need thereof, comprising administering to said t an isolated population ofNK
cells or a pharmaceutical ition thereof, wherein the NK cells are genetically modified
(e.g., comprising a chimeric antigen receptor (CAR) and/or a homing receptor comprise a
chimeric antigen receptor (CAR), wherein said CAR comprises an extracellular domain, a
transmembrane domain, an intracellular stimulatory domain, and optionally a co-stimulatory
Genetically modified NK cells (e.g., NK cells comprising a CAR and/or a homing
receptor) are described in Section 5.3.
.5.3. Infectious Disease
In certain ments, the infectious disease is an infection caused by a Virus, a
bacterium, a fungus, or a helminth. In specific embodiments, the infectious disease is a Viral
infection.
] In specific embodiments, the Viral ion is an infection by a Virus of the
Adenoviridae, Picornaviridae, Herpesviridae, Hepadnaviridae, Flaviviridae, Retroviridae,
Orthomyxoviridae, Paramyxoviridae, Papilommaviridae, Rhabdoviridae, or TogaViridae .
In more specific embodiments, said Virus is human immunodeficiency Virus
(HIV).coxsackieVirus, hepatitis A Virus (HAV), poliovirus, Epstein-Barr Virus (EBV), herpes
simplex type 1 (HSVl), herpes x type 2 (HSV2), human cytomegalovirus (CMV), human
virus type 8 (HHV8), herpes zoster Virus (varicella zoster Virus (VZV) or shingles Virus),
hepatitis B Virus (HBV), hepatitis C Virus (HCV), hepatitis D Virus (HDV), tis E Virus
(HBV), influenza Virus (e.g., influenza A Virus, influenza B virus, influenza C Virus, or
thogotovirus), measles Virus, mumps Virus, parainfluenza Virus, papillomavirus, rabies Virus, or
rubella virus.
] In other more specific embodiments, said Virus is adenovirus species A, serotype 12,
18, or 31; adenoVirus species B, pe 3, 7, 11, 14, 16, 34, 35, or 50; irus species C,
serotype 1, 2, 5, or 6; species D, serotype 8, 9, 10, 13, 15, 17, 19, 20, 22, 23, 24, 25, 26, 27, 28,
29, 30, 32, 33, 36, 37, 38, 39, 42, 43, 44, 45, 46, 47, 48, 49, or 51, s B, serotype 4, or
species F, serotype 40 or 41.
[003 96] In certain other more specific embodiments, the Virus is Apoi Virus (APOIV), Aroa
Virus (AROAV), bagaza Virus (BAGV), Banzi Virus (BANV), Bouboui Virus (BOUV),
Cacipacore Virus (CPCV), Carey Island Virus (CIV), Cowbone Ridge Virus (CRV), Dengue Virus
(DENV), Edge Hill Virus (EHV), Gadgets Gully Virus (GGYV), Ilheus Virus (ILHV), Israel
turkey meningoencephalomyelitis Virus (ITV), Japanese encephalitis Virus (JEV), Jugra Virus
(IUGV), Jutiapa virus (JUTV), kadam virus (KADV), Kedougou virus (KEDV), Kokobera virus
(KOKV), Koutango virus (KOUV), Kyasanur Forest disease virus (KFDV), Langat virus
(LGTV), Meaban virus (MEAV), Modoc virus (MODV), Montana myotis leukoencephalitis
virus (MMLV), Murray Valley encephalitis virus (MVEV), Ntaya virus (NTAV), Omsk
hemorrhagic fever virus (OHFV), Powassan virus (POWV), Rio Bravo virus (RBV), Royal Farm
virus (RFV), Saboya virus (SABV), St. Louis encephalitis virus (SLEV), Sal Vieja virus (SVV),
San Perlita virus (SPV), Saumarez Reef virus (SREV), Sepik virus (SEPV), Tembusu virus
(TMUV), tick-borne encephalitis virus (TBEV), Tyuleniy virus (TYUV), Uganda S virus
(UGSV), Usutu virus (USUV), Wesselsbron virus ), West Nile virus (WNV), Yaounde
virus (YAOV), Yellow fever virus (YFV), Yokose virus (YOKV), or Zika virus (ZIKV).
[003 97] In other embodiments, the NK cells are stered to the subject having a viral
infection as part of an ral therapy regimen that includes one or more other antiviral agents.
Specific antiviral agents that may be administered to an individual having a viral infection
include, but are not limited to: imiquimod, podofilox, yllin, interferon alpha (IFNoc),
los, nonoxynol-9, acyclovir, famciclovir, valaciclovir, ganciclovir, cidofovir; dine,
adine; ribavirin; zanamavir and oseltaumavir; protease inhibitors such as indinavir,
nelfinavir, ritonavir, or saquinavir, nucleoside reverse transcriptase inhibitors such as didanosine,
lamivudine, stavudine, zalcitabine, or zidovudine; and non-nucleoside reverse transcriptase
inhibitors such as pine, or efavirenz.
.6. Administration
[003 98] The NK cells, the genetically modified NK cells, or the second agent as described
herein, may be administered to an individual, e.g., an individual having tumor cells or infected
cells, by any lly-acceptable route known in the art suitable to the administration of live
cells or the second agent. In various embodiments, the cells may be ally ted,
injected, infused, e.g., by way of a catheter or syringe, or otherwise administered directly or
indirectly to the site in need thereof. In s embodiments, the second agent may be injected,
infused, e.g., by way of a catheter or syringe, or otherwise administered directly or indirectly to
the site in need f. In one embodiment, the cells or the second agent are administered to an
individual intravenously. In another embodiment, the cells or the second agent are administered
to the individual at the site of a tumor, e.g., a solid tumor, or an infection. In a specific
embodiment in which the individual has a tumor or an infection at more than one site, the cells or
the second agent are administered to at least two, or all, tumor/infection sites. In certain other
embodiments, the cells or the second agent, or compositions thereof, are administered orally,
nasally, intraarterially, parenterally, ophthalmically, uscularly, subcutaneously,
intraperitoneally, intracerebrally, intraventricularly, intracerebroventricularly, intrathecally,
intracisternally, intraspinally and/or perispinally. In specific embodiments, the cells or the
second agent, or compositions thereof, are stered by ion, infusion, intravenous (IV)
administration, intrafemoral administration, or intratumor administration. In n specific
embodiments, the cells or the second agent are delivered via intracranial or intravertebral needles
and/or catheters with or without pump devices.
In specific embodiments, the step of administering to said subject an ed
population ofNK cells or a ceutical composition thereof is by ion. In specific
embodiments, the injection ofNK cells is local injection. In more specific embodiments, the
local ion is directly into a solid tumor (e.g., a sarcoma). In specific embodiments,
stration ofNK cells is by injection by syringe. In specific embodiments, administration of
NK cells by injection is aided by laparoscopy, endoscopy, ultrasound, computed tomography,
magnetic resonance, or ogy.
The NK cells, the genetically modified NK cells, or the second agent, can be
administered to an individual in a composition, e.g, a matrix, hydrogel, scaffold, or the like.
In one embodiment, the cells are seeded onto a natural matrix, e.g., a placental
biomaterial such as an amniotic membrane material. Such an amniotic membrane material can
be, e.g, amniotic membrane dissected ly from a mammalian ta; fixed or heat-treated
amniotic membrane, substantially dry (i.e., <20% H20) amniotic membrane, chorionic
membrane, substantially dry chorionic membrane, substantially dry amniotic and chorionic
membrane, and the like. red tal biomaterials on which placental stem cells can be
seeded are described in Hariri, US. Application Publication No. 2004/0048796, the disclosure of
which is hereby incorporated by reference in its entirety.
In another embodiment, the cells are suspended in a hydrogel solution suitable for,
e. g., injection. Suitable hydrogels for such compositions include self-assembling peptides, such
as RAD16. In one embodiment, a hydrogel solution comprising the cells can be allowed to
harden, for instance in a mold, to form a matrix having cells dispersed n for implantation.
The cells in such a matrix can also be cultured so that the cells are mitotically expanded prior to
2015/068069
implantation. The hydrogel can be, for example, an organic polymer (natural or tic) that is
cross-linked via nt, ionic, or hydrogen bonds to create a three—dimensional open-lattice
structure that entraps water molecules to form a gel. el-forming materials include
polysaccharides such as alginate and salts thereof, peptides, polyphosphazines, and
polyacrylates, which are crosslinked ionically, or block polymers such as polyethylene oxide-
polypropylene glycol block copolymers which are inked by temperature or pH,
respectively. In some ments, the el or matrix is biodegradable.
In some embodiments, the formulation used in the present invention comprises an in
silu polymelizable gel (see, e.g, US. Patent Application Publication 2002/0022676; Anseth el
al., J. Control Release, ): 199-209 (2002), Wang el al., Biomaterials, 24(22):3969-80
(2003).
In some embodiments, the polymers are at least partially soluble in aqueous solutions,
such as water, buffered salt solutions, or aqueous alcohol ons, that have charged side
groups, or a monovalent ionic salt thereof. Examples of polymers having acidic side groups that
can be reacted with cations are poly(phosphazenes), poly(acrylic acids), poly(methacrylic acids),
mers of acrylic acid and methacrylic acid, poly(vinyl acetate), and sulfonated polymers,
such as sulfonated yrene. Copolymers having acidic side groups formed by reaction of
acrylic or methacrylic acid and Vinyl ether monomers or polymers can also be used. Examples
of acidic groups are carboxylic acid groups, sulfonic acid groups, halogenated (preferably
fluorinated) alcohol groups, phenolic OH groups, and acidic OH groups.
The cells can be seeded onto a three-dimensional ork or scaffold and
implanted in viva. Such a ork can be implanted in ation with any one or more
growth factors, cells, drugs or other components that stimulate tissue formation or otherwise
enhance or improve the practice of the methods described herein.
Examples of scaffolds that can be used in the present invention include nonwoven
mats, porous foams, or self assembling es. Nonwoven mats can be formed using fibers
comprised of a synthetic absorbable copolymer of glycolic and lactic acids (e.g., PGA/PLA)
(VICRYL, Ethicon, Inc., Somerville, N.J.). Foams, composed of, e.g., poly(e-
caprolactone)/poly(glycolic acid) (PCL/PGA) copolymer, formed by ses such as freeze-
drying, or lyophilization (see, e.g., US. Pat. No. 6,355,699), can also be used as scaffolds.
The cells can also be seeded onto, or contacted with, a physiologically-acceptable
ceramic material including, but not limited to, mono-, di-, tri-, tri-, beta-tri-, and tetra-
calcium phosphate, hydroxyapatite, fluoroapatites, calcium sulfates, calcium fluorides, calcium
oxides, calcium carbonates, magnesium calcium phosphates, biologically active s such as
BIOGLASS®, and mixtures thereof. Porous biocompatible ceramic materials currently
commercially available include SURGIBONE® dica Corp, Canada), ENDOBON®
(Merck erial France, France), CEROS® (Mathys, AG, Bettlach, Switzerland), and
mineralized collagen bone grafting products such as HEALOSTM (DePuy, Inc, Raynham, MA)
and VITOSS®, RHAKOSSTM, and CORTOSS® (Orthovita, n, Pa.). The framework can be
a mixture, blend or composite of natural and/or synthetic materials.
In r embodiment, cells can be seeded onto, or contacted with, a felt, which can
be, e.g, composed of a lament yarn made from a bioabsorbable material such as PGA,
PLA, PCL copolymers or blends, or hyaluronic acid.
The cells can, in another embodiment, be seeded onto foam lds that may be
composite structures. Such foam scaffolds can be molded into a useful shape, such as that of a
portion of a specific structure in the body to be ed, replaced or augmented. In some
embodiments, the framework is d, e.g., with 0.1M acetic acid followed by incubation in
polylysine, PBS, and/or collagen, prior to inoculation of the cells described herein in order to
enhance cell attachment al surfaces of a matrix may be modified to improve the
attachment or growth of cells and differentiation of tissue, such as by plasma-coating the matrix,
or addition of one or more proteins (e.g., ens, elastic , reticular fibers), glycoproteins,
glycosaminoglycans (e.g., heparin sulfate, chondroitinsulfate, oitinsulfate, dermatan
sulfate, keratin sulfate, etc), a cellular , and/or other materials such as, but not limited to,
gelatin, alginates, agar, agarose, and plant gums, and the like.
] In some embodiments, the scaffold comprises, or is treated with, materials that render
it non-thrombogenic. These treatments and materials may also promote and sustain endothelial
growth, migration, and extracellular matrix deposition. Examples of these materials and
treatments include but are not limited to natural materials such as basement membrane proteins
such as n and Type IV collagen, synthetic materials such as EPTFE, and segmented
polyurethaneurea silicones, such as PURSPANTM (The Polymer Technology Group, Inc.,
Berkeley, Calif). The scaffold can also comprise anti-thrombotic agents such as heparin, the
scaffolds can also be treated to alter the surface charge (e.g., coating with plasma) prior to
seeding with placental stem cells.
In specific embodiments, the NK cells, the genetically modified NK cells, or the
second agent is administered with a pharmaceutical carrier. The pharmaceutical carrier can be
any known in the art. In specific embodiments, the NK cells or the genetically d NK
cells are fucosylated on the cell surface.
Determination of the number ofNK cells or genetically modified NK cells (e.g., NK
cells sing a CAR and/or a homing receptor), or the amount of the second agent can be
performed ndently. Such determination can be based on the condition of the subject and
can be made by the physician.
In certain embodiments, the NK cells, the genetically modified NK cells, or the
second agent, is used, e.g., stered to an individual, in any amount or number that results in
a detectable therapeutic benefit to the individual, e.g, an effective , wherein the
individual has a viral ion, cancer, or tumor cells, for example, an individual having tumor
cells, a solid tumor or a blood cancer, e.g, a cancer patient. Cells can be administered to such an
individual by absolute numbers of cells, e.g., said individual can be administered at about, at
least about, or at most about, 1x 105, 5 x106,5 x106,1x107,5 x107,1x108,5 x108,1
X 109, 5 X 109, 1 X 1010, 5 X 1010, or 1 X 1011 cells. In other embodiments, cells can be
administered to such an dual by ve numbers of cells, e.g., said individual can be
administered at about, at least about, or at most about, 1 X 105, 5 X 105, 1 X 106, 5 X 106, 1 X 107,
x107,1x108,5 x108,1x109,5 x109,1x101°,5 x 1010, or 1 x 1011 cells. In other
embodiments, cells can be administered to such an individual by relative numbers of cells, e.g,
said individual can be administered at about, at least about, or at most about, 1 X 105, 5 X 105, 1 X
106, 5 X 106, 1 X 107, 5 X 107, 1 X 108, or 5 X 108 cells. Cells can be administered to such an
individual according to an imate ratio between a number ofNK cells or genetically
modified NK cells and optionally placental perfusate cells, and a number of tumor/infected cells
in said individual (e.g., an estimated number). For eXample, NK cells or the genetically modified
NK cells can be administered to said individual in a ratio of about, at least about or at most about
1:1, 1:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 55:1,
60:1, 65:1, 70:1, 75:1, 80:1, 85:1, 90:1, 95:1 or 100:1 to the number oftumor/infected cells in the
individual. The number of tumor/infected cells in such an individual can be estimated, e.g., by
counting the number of tumor/infected cells in a sample of tissue from the individual, e.g., blood
sample, biopsy, or the like. In specific embodiments, e.g., for solid , said counting is
performed in combination with imaging of the tumor or tumors to obtain an imate tumor
volume.
In a specific embodiment, NK cells (or genetically modified NK cells) are
supplemented with placental perfusate cells or placental perfusate. In a specific embodiment,
about 1 x 104, 5 x104,1x105,5 x105,1x106,5 x106,1x107,5 x107,1x108,5 x108 or more
NK cells (or genetically modified NK cells) per milliliter, or 1 x 104, 5 x 104, 1 x 105, 5 x 105, 1 x
", 5 x106,1x107,5 x107,1x108,5 x103,1x109,5 x109,1x101°,5 x 1010, 1x 1011 or
more NK cells (or genetically modified NK cells) per milliliter, are supplemented with about, or
at least about, 1 x 104, 5 x104,1x105,5 x105,1x10"’,5 x106, 1x107,5 x107,1x108,5 x108
or more isolated placental perfusate cells per milliliter, or 1 X 104, 5 X 104, 1 X 105, 5 X 105, 1 X
106, 5 x106,1x107,5 x107,1x108,5 x108,1x109,5 x109,1x1010,5 x 1010, 1x 1011 or
more isolated placental perfusate cells per milliliter. In other more specific embodiments, about
1x 104, 5 x104,1x105,5 x 105, 1x 106, 5 X106,1X107,5 X107,1X108,5 x108 or moreNK
cells (or genetically modified NK cells) per milliliter, or 1 x 104, 5 x 104, 1 x 105, 5 x 105, 1 x
106, 5 X106,1X107,5 x108,5 x109,5 x109,1x1010,5 x 1010, 1 x 1011 or
more NK cells (or genetically modified NK cells) per milliliter are supplemented with about, or
at least about, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 85,
90, 95, 100, 150, 200, 250, 300, 350, 400, 450, 500, 550, 600, 650, 700, 750, 800, 850, 900, 950
or 1000 mL of perfusate, or about 1 unit of perfusate.
In another c embodiment, NK cells (or genetically modified NK cells) are
supplemented with nt placental cells, e.g., adherent placental stem cells or multipotent
cells, e. g., CD34‘, CD10+, CD105+, CD200Jr tissue e plastic-adherent tal cells. In
specific embodiments, the NK cells are supplemented with about 1 X 104, 5 X 104, 1 X 105, 5 X
105, 1 x 10", 5 x 106, 1 x 107, 5 x 107, 1 x 103, 5 x 108 or more adherent placental stem cells per
milliliter, or 1 x 104, 5 x104,1x105,5 x 105, 1x 10", 5 x106, 1x107,5 x107,1x108,5 x108,1
X 109, 5 X 109, 1 X 1010, 5 X 1010, 1 X 1011 or more adherent tal cells, e.g., adherent
placental stem cells or multipotent cells.
In another specific embodiment, NK cells (or genetically modified NK cells) are
supplemented with conditioned medium, e.g, medium conditioned by CD34‘, CD10+, CD105+,
CD200+ tissue culture plastic-adherent placental cells, e.g., 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.1, 0.8,
2015/068069
0.9, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 mL of stem cell-conditioned culture medium per unit of perfusate,
or per 104, 105, 106, 107, 108, 109, 1010, or 1011NK cells (or genetically d NK cells). In
certain embodiments, the tissue culture plastic-adherent placental cells are the multipotent
nt tal cells described in US. Patent No. 7,468,276 and US. Patent ation
Publication No. 2007/0275362, the disclosures of which are incorporated herein by reference in
their ties. In another specific embodiment, the method additionally comprises bringing the
tumor cells into proximity with, or administering to the individual, an immunomodulatory
compound (e.g., an immunmodulatory compound as described in section 5.2.7.1) or thalidomide.
In another specific embodiment, NK cells (or genetically modified NK cells) are
supplemented with placental perfusate cells, the perfusate cells are brought into proximity with
interleukin-2 (IL-2) for a period of time prior to said bringing into proximity. In certain
embodiments, said period oftime is about, at least, or at most 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 12, 14,
16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46 or 48 hours prior to said bringing into
proximity.
The NK cells, the genetically modified NK cells, or the second agent can be
administered once (i.e., in single dose) to an individual having a viral infection, a hematological
disorder, or a solid tumor during a course of therapy; or can be administered multiple times (1'. e.,
in multiple , e.g., once every 1, 2, 3, 4, 5, 6, 7, 8, 9,10,11,12,13,14,15,16,l7,18,l9,
, 21, 22 or 23 hours, or once every 1, 2, 3, 4, 5, 6 or 7 days, or once every 1, 2, 3, 4, 5, 6, 7, 8,
9, 10, 24, 36 or more weeks during therapy. In embodiments n both NK cells (or
genetically modified NK cells) and a second agent are used, the second agent and the NK cells
(or genetically modified NK cells), can be administered to the individual together, e. g., in the
same formulation, separately, e.g., in separate formulations, at approximately the same time; or
can be administered separately, e.g., on different dosing schedules or at different times of the
day. The second agent can be administered before, after, or at the same time as the NK cells (or
genetically modified NK . NK cells (or genetically d NK cells) or a second agent
can be administered without regard to whether the NK cells (or genetically modified NK cells) or
the second agent have been administered to the individual in the past.
.7. Patients
] The patient referred to in this disclosure, can be, but is not limited to, a human or non—
human vertebrate such as a wild, domestic or farm animal. In certain ments, the patient is
2015/068069
a mammal, e.g., a human, a cow, a dog, a cat, a goat, a horse, a sheep, a pig, a rat, or a mouse. In
one embodiment, the patient is a human patient.
.8. Kits
Provided herein is a pharmaceutical pack or kit comprising one or more containers
filled with a composition sing NK cells or genetically modified NK cells (e.g., NK cells
sing a CAR and/or a homing receptor) described above, and one or more containers filled
with a composition comprising a second agent described above. Also provided herein is a
pharmaceutical pack or kit comprising one or more containers filled with a composition
comprising NK cells comprising a CAR and/or a homing receptor described above. ally
associated with such container(s) can be a notice in the form ibed by a governmental
agency regulating the manufacture, use or sale of pharmaceuticals or biological products, which
notice reflects approval by the agency of manufacture, use or sale for human administration.
] The kits encompassed herein can be used in accordance with the methods of treating
as provided herein, e.g., methods of treating a hematological cancer, a solid tumor, or a viral
infection
6. EXAMPLE
6.1. Example 1: Antibody-Dependent Cellular Cytotoxicity (ADCC) Using Rituximab
] The Example presented herein demonstrates that co-administration ofNK cells (here,
PiNK cells) and an dy c for a cell surface antigen (in this case, CD20), e. g., a tumor-
associated antigen increases NK antibody-dependent cell-mediated cytotoxicity (ADCC) of the
NK cells.
The experiments presented herein e an D20 antibody, Iituximab, and
Daudi cells (Cat#: CCL-213, ATCC), which are high expressers of CD20, Daudi cells were
harvested and labeled with PKH26 (Cat#: PKH26GL—1KT et al.,
, Sigma-Aldrich) (Ferlazzo, G.,
J Immunol, 172: 1455—1462 (2004); Lehmann, D., et al., Stem Cells Dev, 21: 2926-2938 (2012)),
whose lipophilic aliphatic residue inserts into cell plasma membrane. The cells were washed
and incubated with rituximab (and human IgG as an isotype control) at different concentrations
as indicated in Fig. 1 for 1h at room temperature. After washing three times, 104 target cells
were placed in 96-well U-bottom tissue culture plates and incubated with cultured NK cells at
various effector-target (EzT) ratios (50: 1, 20: 1, 10:1 and 2.5: 1) in 200 ul RPMI 1640
supplemented with 10% PB S. The Cultures were incubated for 4h at 37°C in 5% C02. After
tion, cells were harvested and TO-PRO-3 (Catalog # T3605, Invitrogen), a ne-
impermeable DNA stain, was added to es to 0.25uM final tration followed by FACS
analysis using BD FACSCanto II. Cytotoxicity (“% cytotoxicity” in Fig. 1) is expressed as
percentage of dead cells (PKH26+TO-PRO-3+) within the total PKH26+ target tumor cells,
subtracted by spontaneous cell death.
Incubating Daudi cells with rituximab increases the cytotoxicity of (PiNK) cells
compared to human IgG controls, thereby indicating enhanced cytolytic activity of PiNK cells
when accompanied by co-administration of the anti-CD20 antibody (Fig. 1).
6.2. Example 2: Cytotoxicity of Three-Stage NK cells Against Multiple Myeloma
ype characterization ofMM cell lines and primary MM samples. Primary
multiple myeloma (MM) cells (Tissue Solution, donor IDs: 85, l\/11\/I293) or W tumor
cell lines: RPMI8226 (ATCC, Cat# 5) and OPM2 (DSMZ, Cat# ACC-50) cells (1 x 106
each) were used for this assay. Cells were stained with D-Ll APC gend, Cat#
329708), anti-CSl PE-Cy7 gend, Cat# 331816) and 7-AAD (BD Bioscience, Cat# 559925)
according to the manufacturer’ s protocol. Data were acquired on BD LSRFortessa (BD
Biosciences) and analyzed using FLOWJO® software (Tree Star). Data were sed as %
positive cells gated under 7-AAD- single cells. Setting of the % positive gate was done using
unstained sample as control.
Results. The expression of PD—Ll and CS—l on the MM cells lines is shown in
Figure 2. The left-most peak in the panels of Figure 2 indicates the control, whereas the right-
most peak indicates the sample. The tage of cells positive for PD-Ll was as follows:
71.6% W285, 70.7% MM293, 66.2% OPM-2, and 94.4% RPMI8226. The percentage of cells
positive for CS-1 was as follows: 31.8% MM285, 58.8% MM293, 93.4% OPM-2, and 29.5%
RPMI8226.
24-hour Cytotoxicity assay of three-stage NK cells against MM cell lines and
primary MM samples. OPM2 cells were labeled with 10 uM PKH26 fluorescent dye (Sigma-
Aldrich, Cat# PKH26—GL) prior to co-culture with three-stage NK cells from five different
donors at an effector to target (EzT) ratio of 3:1 (3 x 105 and 1 x 105 three-stage NK and OPM2
cells, tively) in 1 mL of RPMIl640 supplemented with 10% FBS and antibiotics (Basal
medium), or the experimetnal conditions: IL-lS (5 ng/mL) rogen, Cat# PHC9153), IL-2
(200 IU/mL) (Invitrogen, Cat# PHC0023), anti-PD-Ll (10ng/mL) (Affymetrix, Cat# 16
82); anti-IgG(10ng/mL) (Affymetrix, Cat# 4-82); REVLIMID® (lenalidomide; luM), or
DMSO (0.1%) in 48-well plates. Target cells alone were plated as controls, After incubation for
24 hours at 37° C and 5% C02, cells were harvested, followed by staining with 1 uM TO-PRO-3
to identify the dead cells. The number of viable target cells +TO-PRO-3') in each sample
was quantified by flow cytometry using ng beads following the protocol ed by the
manufacturer (Invitrogen, Cat# C3 6950). Counting beads were introduced in this assay in order
to account for any ial proliferation of tumor cells during the prolonged 24 hour culture.
Briefly, the number of viable target cells in each sample was calculated as follows:
(% PKH26+TO-PRO-3' live targets) / (% counting beads) X (assigned bead count of the counting
bead lot). Percent survival (% survival) in s t cells with co-cultures of three-stage
NK cells) was calculated by dividing the absolute number of viable, , target cells
remaining in co-cultures with three-stage NK cells after 24 hours with the absolute number of
viable, , target cells remaining in culture of target cells alone. Percent cytotoxicity at 24
hours reported was calculated as: 100 - % survival. s were depicted as mean in standard
deviation of the mean.
Results. Three-stage NK cells displayed cytotoxic activity against different MM cell
lines. The three-stage NK cells exerted 20-60% specific lysis against four primary MM samples
at an E:T ratio of 3:1 (Figure 3). Varying susceptibility of MIVI targets from different donors to
NK killing was observed. In addition, initial assessment the cytotoxicity of three-stage NK cells
against OPM2 indicated an enhancement of tic activity by addition of the cytokines,
immunomodulatory compounds, and monoclonal antibodies utilized in these experiments (Figure
EQUIVALENTS
The present invention is not to be limited in scope by the specific embodiments
described herein. Indeed, s modifications of the invention in addition to those described
will become apparent to those skilled in the art from the foregoing description and accompanying
figures. Such modifications are intended to fall within the scope of the appended claims.
WO 09668
All references cited herein are incorporated herein by reference in their entirety and
for all purposes to the same extent as if each individual publication, patent or patent application
was specifically and individually indicated to be incorporated by reference in its entirety for all
purposes. The citation of any publication is for its disclosure prior to the filing date and should
not be construed as an admission that the present invention is not entitled to antedate such
publication by virtue of prior invention.
Claims (66)
- l. A method of treating a cancer in a subject in need thereof, comprising: (a) stering to said subject an isolated tion of natural killer (NK) cells or a pharmaceutical composition thereof; and (b) administering to said subject a second agent or a pharmaceutical composition thereof, wherein said second agent can be used to treat said cancer.
- 2. The method of claim 1, wherein the second agent is an antibody or antigen binding fragment thereof that specifically binds to a tumor-associated antigen (TAA).
- 3. The method of claim 2, wherein the dy is a monoclonal antibody.
- 4. The method of claim 2 or 3, n the TAA is selected from the group consisting of CD123, CLL-l, CD38, CS-l, CD138, RORl, FAP, MUC1, PSCA, EGFRVIII, EPHA2, and GD2.
- 5. The method of claim 1, wherein the second agent is an antibody or antigen binding fragment thereof that specifically binds to a tumor microenVironment-associated antigen (TMAA).
- 6. The method of claim 5, wherein the antibody is a monoclonal antibody.
- 7. The method of claim 5 or 6, wherein the TMAA is selected from the group consisting of VEGF-A, EGF, PDGF, IGF, and bFGF.
- 8. The method of claim 1, wherein the second agent is an antibody or antigen binding nt thereof that specifically binds to and antagonizes the activity of an immune checkpoint protein.
- 9. The method of claim 8, n the antibody is a monoclonal antibody.
- 10. The method of claim 8 or 9, wherein the immune checkpoint protein is selected from the group ting of CTLA-4, PD-l, PD-Ll, PD-L2, and LAG-3.
- 11. The method of claim 1, wherein the second agent is a bispecific killer cell r (BiKE).
- 12. The method of claim 11, wherein the BiKE comprises a first single chain variable fragment (scFV) that specifically binds to a TAA.
- 13. The method of claim 12, wherein the TAA is selected from the group consisting of CD123, CLL-l, CD38, CS-l, CD138, RORl, FAP, MUC1, PSCA, EGFRVIII, EPHA2, and GD2. WO 09668
- 14. The method of any one of claims 11-13, wherein the BiKE comprises a second scFv that specifically binds to CD16
- 15. The method of claim 1, wherein the second agent is an anti-inflammatory agent.
- l6. The method of claim 1, wherein the second agent is an immunomodulatory agent.
- 17. The method of claim 1, wherein the second agent is a cytotoxic agent.
- 18. The method of claim 1, n the second agent is a cancer vaccine.
- 19. The method of claim 1, n the second agent is a chemotherapeutic.
- 20. The method of claim 1, wherein the second agent is an HDAC inhibitor.
- 21‘ The method of claim 1, wherein the second agent is an siRNA.
- 22. The method of any one of claims l-2l, wherein the isolated population ofNK cells or a pharmaceutical composition thereof is administered before the second agent or a pharmaceutical ition thereof.
- 23. The method of any one of claims l-21, wherein the isolated population ofNK cells or a pharmaceutical composition thereof is administered after the second agent or a pharmaceutical composition thereof.
- 24. The method of any one of claims l-21, n the isolated population ofNK cells or a pharmaceutical composition thereof is administered at the same time as the second agent or a pharmaceutical composition thereof.
- 25. The method of any one of claims l-24, wherein the step of administering to said subject an isolated population ofNK cells or a pharmaceutical composition f is by injection, infusion, intravenous (IV) administration, intrafemoral administration, or intratumor stration.
- 26. The method of any one of claims l-25, wherein the step of administering to said subject an isolated population ofNK cells or a pharmaceutical composition thereof is performed with a devise, a matrix, or a scaffold.
- 27. The method of any one of claims 1-26, wherein the step of administering to said subject a second agent or a pharmaceutical composition f is by injection, infusion, intravenous (IV) administration, intrafemoral stration, or intratumor administration
- 28. The method of any one of claims 1-27, wherein the step of administering to said subject a second agent or a ceutical composition f is performed with a devise, a matrix, or a scaffold.
- 29. The method of any one of claims 1—28, wherein the NK cells are fucosylated on the cell surface.
- 30. The method of any one of claims 1-29, wherein the isolated population ofNK cells or a pharmaceutical composition thereof is stered in a single dose.
- 31. The method of any one of claims 1-29, wherein the isolated population ofNK cells or a ceutical ition thereof is administered in multiple doses.
- 32. The method of any one of claims 1-31, wherein the second agent or a pharmaceutical composition thereof is administered in a single dose.
- 33. The method of any one of claims 1-31, wherein the second agent or a pharmaceutical composition thereof is administered in multiple doses.
- 34. A method of treating a cancer in a t in need thereof, sing administering to said subject an ed population ofNK cells or a pharmaceutical composition thereof, wherein the NK cells comprise a chimeric antigen receptor (CAR), wherein said CAR comprises an extracellular domain, a transmembrane domain, an intracellular stimulatory domain, and optionally a co-stimulatory domain.
- 35. The method of claim 34, wherein the CAR comprises an extracellular domain, a transmembrane domain, an intracellular stimulatory , and a co-stimulatory domain.
- 36. The method of claim 34 or 35, wherein the NK cells sing the CAR are derived from CD34+ hematopoietic stem cells (HSCs) that are engineered to express the CAR.
- 37. The method of any one of claims 34-3 6, wherein the extracellular domain is an antigen binding domain.
- 38. The method of claim 37, wherein the antigen binding domain is an scFV domain.
- 39. The method of claim 37 or 38, wherein the antigen binding domain specifically binds to a TAA,
- 40. The method of claim 39, wherein the TAA is selected from the group consisting of CD123, CLL-l, CD38, and CS-l.
- 41. The method of any one of claims 34-40, wherein the intracellular atory domain is a CD3 zeta signaling domain.
- 42. The method of any one of claims 34-41, wherein the mulatory domain comprises the intracellular domain of CD28, 4—1BB, PD—l, 0X40, CTLA-4, NKp46, NKp44, NKp30, DAPlO or DAPlZ.
- 43. A method of treating a cancer in a subject in need thereof, comprising administering to said subject an isolated population ofNK cells or a pharmaceutical composition thereof, wherein the NK cells comprise a homing receptor.
- 44‘ The method of claim 43, wherein the NK cells comprising the homing receptor are derived from CD34+ hematopoietic stem cells (HSCs) that are engineered to express the homing receptor.
- 45. The method of claim 43 or 44, wherein the homing receptor is a chemotactic receptor,
- 46. The method of claim 45, wherein the chemotactic receptor is selected from the group consisting of CXCR4, VEGFRZ, and CCR7.
- 47. A method of treating a cancer in a subject in need thereof, comprising administering to said t an isolated population of Natural Killer (NK) cells or a pharmaceutical ition thereof, wherein the NK cells comprise a chimeric antigen receptor (CAR) and a homing or, wherein said CAR comprises an extracellular domain, a embrane domain, an intracellular stimulatory , and optionally a co- stimulatory domain.
- 48. The method of claim 47, wherein the CAR comprises an ellular domain, a transmembrane domain, an intracellular stimulatory domain, and a co-stimulatory domain.
- 49. The method of claim 47 or 48, wherein the NK cells comprising the CAR and the homing receptor are derived from CD34+ hematopoietic stem cells (HSCs) that are engineered to express the CAR.
- 50. The method of any one of claims 47—49, wherein the NK cells comprising the CAR and the homing receptor are derived from CD34+ hematopoietic stem cells (HSCs) that are engineered to s the homing receptor.
- 51. The method of any one of claims 47-50, wherein the extracellular domain is an antigen binding domain.
- 52. The method of claim 51, wherein the antigen binding domain is an scFV domain.
- 53. The method of claim 51 or 52, wherein the n binding domain cally binds to a TAA.
- 54. The method of claim 53, wherein the TAA is selected from the group consisting of CD123, CLL-l, CD38, and CS-l.
- 55. The method of any one of claims 47-54, n the ellular stimulatory domain is a CD3 zeta signaling domain.
- 56. The method of any one of claims 47—55, wherein the mulatory domain comprises the intracellular domain of CD28, 4-1BB, PD—l, 0X40, CTLA-4, NKp46, NKp44, NKp30, DAPIO or DAP12.
- 57. The method of any one of claims 47—56, wherein the homing receptor is a chemotactic receptor,
- 58. The method of claim 57, n the chemotactic receptor is selected from the group consisting of CXCR4, VEGFR2, and CCR7.
- 59. The method of any one of claims 34—5 8, wherein the step of administering to said subject an isolated population ofNK cells or a pharmaceutical composition thereof is by injection, infusion, intravenous (IV) administration, intrafemoral administration, or intratumor administration.
- 60. The method of any one of claims 34-59, wherein the step of administering to said t an isolated population ofNK cells or a pharmaceutical composition thereof is performed with a devise, a matrix, or a scaffold.
- 61. The method of any one of claims 34-60, wherein the NK cells are fucosylated on the cell surface.
- 62. The method of any one of claims 34-61, wherein the isolated population ofNK cells or a pharmaceutical composition thereof is administered in a single dose.
- 63. The method of any one of claims 34-61, wherein the isolated population ofNK cells or a pharmaceutical ition thereof is administered in multiple doses.
- 64. The method of any one of claims 1-63, wherein the cancer is a hematological cancer.
- 65. The method of any one of claims 1-63, wherein the cancer is a solid tumor.
- 66. A method of treating a Viral infection in a subject in need thereof, comprising:
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US62/139,952 | 2015-03-30 |
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