NZ715444B2 - Methods of treating cancer using pd-1 axis binding antagonists and tigit inhibitors - Google Patents
Methods of treating cancer using pd-1 axis binding antagonists and tigit inhibitors Download PDFInfo
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- NZ715444B2 NZ715444B2 NZ715444A NZ71544414A NZ715444B2 NZ 715444 B2 NZ715444 B2 NZ 715444B2 NZ 715444 A NZ715444 A NZ 715444A NZ 71544414 A NZ71544414 A NZ 71544414A NZ 715444 B2 NZ715444 B2 NZ 715444B2
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- antibody
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Abstract
The present disclosure describes combination treatment comprising a PD-1 axis binding antagonist and an anti-TIGIT antagonist antibody, wherein the PD-1 axis binding antagonist is (1) an anti-PD-1 antagonist antibody or an antigen-binding fragment thereof; (2) an anti-PD-L1 antagonist antibody or an antigen-binding fragment thereof; or (3) an anti-PD-L2 antagonist antibody or an antigen-binding fragment thereof. The treatment includes methods of treating conditions where enhanced immunogenicity is desired such as increasing tumor immunogenicity for the treatment of cancer or chronic infection. antigen-binding fragment thereof; or (3) an anti-PD-L2 antagonist antibody or an antigen-binding fragment thereof. The treatment includes methods of treating conditions where enhanced immunogenicity is desired such as increasing tumor immunogenicity for the treatment of cancer or chronic infection.
Description
METHODS OF TREATING CANCER USING PD-1 AXIS BINDING ANTAGONISTS
AND TIGIT INHIBITORS
CROSS REFERENCES TO RELATED APPLICATIONS
This application claims the priority benefit of U.S. Provisional Application No.
61/846,941, filed July 16, 2013, U.S. Provisional Application No. 61/865,582, filed August
13, 2013, U.S. Provisional Application No. 61/950,754, filed March 10, 2014, U.S.
Provisional Application No. 61/985,884, filed April 29, 2014, and U.S. Provisional
Application No. 61/992,109, filed May, 12, 2014, each of which is hereby incorporated by
reference in its entirety. The reader’s attention is also directed to related divisional
applications NZ 755387 and NZ 755389.
SUBMISSION OF SEQUENCE LISTING ON ASCII TEXT FILE
The content of the following submission on ASCII text file is incorporated herein
by reference in its entirety: a computer readable form (CRF) of the Sequence Listing (file
name: 146392025940SEQLISTING.TXT, date recorded: July 16, 2014, size: 25 KB).
BACKGROUND OF THE INVENTION
The provision of two distinct signals to T-cells is a widely accepted model for
lymphocyte activation of resting T lymphocytes by antigen-presenting cells (APCs). Lafferty
et al, Aust. J. Exp. Biol. Med. ScL 53: 27-42 (1975). This model further provides for the
discrimination of self from non-self and immune tolerance. Bretscher et al, Science 169:
1042-1049 (1970); Bretscher, P.A., P.N.A.S. USA 96: 185-190 (1999); Jenkins et al, J. Exp.
Med. 165: 302-319 (1987). The primary signal, or antigen specific signal, is transduced
through the T- cell receptor (TCR) following recognition of foreign antigen peptide presented
in the context of the major histocompatibility-complex (MHC). The second or co-stimulatory
signal is delivered to T-cells by co-stimulatory molecules expressed on antigen-presenting
cells (APCs), and induce T-cells to promote clonal expansion, cytokine secretion and effector
function. Lenschow et al., Ann. Rev. Immunol. 14:233 (1996). In the absence of co-
stimulation, T-cells can become refractory to antigen stimulation, which results in a
tolerogenic response to either foreign or endogenous antigens.
In the two-signal model, T-cells receive both positive co-stimulatory and negative
co-inhibitory signals. The regulation of such positive and negative signals is critical to
maximize the host's protective immune responses, while maintaining immune tolerance and
preventing autoimmunity. Negative signals seem necessary for induction of T-cell tolerance,
while positive signals promote T-cell activation.
Both co-stimulatory and co-inhibitory signals are provided to antigen-exposed T
cells, and the interplay between co-stimulatory and co-inhibitory signals is essential to
controlling the magnitude of an immune response. Further, the signals provided to the T cells
change as an infection or immune provocation is cleared, worsens, or persists, and these
changes powerfully affect the responding T cells and re-shape the immune response.
The mechanism of co-stimulation is of therapeutic interest because the manipulation
of co-stimulatory signals has shown to provide a means to either enhance or terminate cell-
based immune response. Recently, it has been discovered that T cell dysfunction or anergy
occurs concurrently with an induced and sustained expression of the inhibitory receptor,
programmed death 1 polypeptide (PD-1). As a result, therapeutic targeting of PD-1 and other
molecules which signal through interactions with PD-1, such as programmed death ligand 1
(PD-Ll) and programmed death ligand 2 (PD-L2) are an area of intense interest.
PD-L1 is overexpressed in many cancers and is often associated with poor
prognosis (Okazaki T et al., Intern. Immun. 2007 19(7):813) (Thompson RH et al., Cancer
Res 2006, 66(7):3381). Interestingly, the majority of tumor infiltrating T lymphocytes
predominantly express PD-1, in contrast to T lymphocytes in normal tissues and peripheral
blood T lymphocytes indicating that up-regulation of PD-1 on tumor-reactive T cells can
contribute to impaired antitumor immune responses (Blood 2009 114(8):1537). This may be
due to exploitation of PD-L1 signaling mediated by PD-L1 expressing tumor cells interacting
with PD-1 expressing T cells to result in attenuation of T cell activation and evasion of
immune surveillance (Sharpe et al., Nat Rev 2002) (Keir ME et al., 2008 Annu. Rev.
Immunol. 26:677). Therefore, inhibition of the PD-L1/PD-1 interaction may enhance CD8+ T
cell-mediated killing of tumors.
The inhibition of PD-1 axis signaling through its direct ligands (e.g., PD-Ll, PD-L2)
has been proposed as a means to enhance T cell immunity for the treatment of cancer (e.g.,
tumor immunity). Moreover, similar enhancements to T cell immunity have been observed
by inhibiting the binding of PD-L1 to the binding partner B7-1. Furthermore, combining
inhibition of PD-1 signaling with other signaling pathways that are deregulated in tumor cells
may further enhance treatment efficacy. There remains a need for such an optimal therapy
for treating, stabilizing, preventing, and/or delaying development of various cancers. It is an
object of the invention to go at least some way toward meeting this need; and/or to at least
provide the public with a useful choice.
[0008A] In this specification where reference has been made to patent specifications, other
external documents, or other sources of information, this is generally for the purpose of
providing a context for discussing the features of the invention. Unless specifically stated
otherwise, reference to such external documents is not to be construed as an admission that
such documents, or such sources of information, in any jurisdiction, are prior art, or form part
of the common general knowledge in the art.
All references, publications, and patent applications disclosed herein are hereby
incorporated by reference in their entirety.
BRIEF SUMMARY OF THE INVENTION
[0009A] In a first aspect, the invention relates to use of a PD-1 axis binding antagonist in the
manufacture of a medicament for treating or delaying progression of cancer in an individual,
wherein the medicament is to be administered in combination with an anti-TIGIT antagonist
antibody or antigen-binding fragment thereof, wherein the PD-1 axis binding antagonist is (1)
an anti-PD-1 antagonist antibody or an antigen-binding fragment thereof; (2) an anti-PD-L1
antagonist antibody or an antigen-binding fragment thereof; or (3) an anti-PD-L2 antagonist
antibody or an antigen-binding fragment thereof.
[0009B] In a second aspect, the invention relates to use of an anti-TIGIT antagonist antibody
or antigen-binding fragment thereof in the manufacture of a medicament for treating or
delaying progression of cancer in an individual, wherein the medicament is to be
administered in combination with a PD-1 axis binding antagonist, wherein the PD-1 axis
binding antagonist is (1) an anti-PD-1 antagonist antibody or an antigen-binding fragment
thereof; (2) an anti-PD-L1 antagonist antibody or an antigen-binding fragment thereof; or (3)
an anti-PD-L2 antagonist antibody or an antigen-binding fragment thereof.
BRIEF DESCRIPTION
Described herein is a combination treatment comprising a PD-1 axis binding
antagonist and an agent that decreases or inhibits TIGIT expression and/or activity.
Described herein are methods for treating or delaying progression of cancer in an
individual comprising administering to the individual an effective amount of a PD-1 axis
binding antagonist and an agent that decreases or inhibits TIGIT expression and/or activity.
Described herein are also methods for reducing or inhibiting cancer relapse or
cancer progression in an individual comprising administering to the individual an effective
amount of a PD-1 axis binding antagonist and an agent that decreases or inhibits TIGIT
expression and/or activity.
Described herein are also methods for treating or delaying progression of an
immune related disease in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and an agent that decreases or inhibits
TIGIT expression and/or activity.
Described herein are also methods for reducing or inhibiting progression of an
immune related disease in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and an agent that decreases or inhibits
TIGIT expression and/or activity.
In some embodiments, the immune related disease is associated with a T cell
dysfunctional disorder. In some embodiments, the T cell dysfunctional disorder is
characterized by decreased responsiveness to antigenic stimulation. In some embodiments,
the T cell dysfunctional disorder is characterized by T cell anergy or decreased ability to
secrete cytokines, proliferate or execute cytolytic activity. In some embodiments, the T cell
dysfunctional disorder is characterized by T cell exhaustion. In some embodiments, the T
cells are CD4+ and CD8+ T cells. In some embodiments, the immune related disease is
selected from the group consisting of unresolved acute infection, chronic infection and tumor
immunity.
Described herein are also methods of increasing, enhancing or stimulating an
immune response or function in an individual by administering to the individual an effective
amount of a PD-1 axis binding antagonist and an agent that decreases or inhibits TIGIT
expression and/or activity.
Described herein are also methods of treating or delaying progression of cancer in
an individual comprising administering to the individual an effective amount of a PD-1 axis
binding antagonist and an agent that modulates the CD226 expression and/or activity.
Described herein are also methods for reducing or inhibiting cancer relapse or
cancer progression in an individual comprising administering to the individual an effective
amount of a PD-1 axis binding antagonist and an agent that modulates the CD226 expression
and/or activity.
Described herein are also methods for treating or delaying progression of an
immune related disease in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and an agent that modulates the CD226
expression and/or activity.
Described herein are also methods for reducing or inhibiting progression of an
immune related disease in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and agent that modulates the CD226
expression and/or activity.
In some embodiments, the immune related disease is associated with a T cell
dysfunctional disorder. In some embodiments, the T cell dysfunctional disorder is
characterized by decreased responsiveness to antigenic stimulation. In some embodiments,
the T cell dysfunctional disorder is characterized by T cell anergy, or decreased ability to
secrete cytokines, proliferate or execute cytolytic activity. In some embodiments, the T cell
dysfunctional disorder is characterized by T cell exhaustion. In some embodiments, the T
cells are CD4+ and CD8+ T cells. In some embodiments, the immune related disease is
selected from the group consisting of unresolved acute infection, chronic infection and tumor
immunity.
Described herein are also methods of increasing, enhancing or stimulating an
immune response or function in an individual by administering to the individual an effective
amount of a PD-1 axis binding antagonist and an agent that modulates the CD226 expression
and/or activity.
In some embodiments, the agent that modulates the CD226 expression and/or
activity is capable of increasing and/or stimulating CD226 expression and/or activity.
In some embodiments, the agent that modulates the CD226 expression and/or
activity is selected from an agent that inhibits and/or blocks the interaction of CD226 with
TIGIT, an antagonist of TIGIT expression and/or activity, an antagonist of PVR expression
and/or activity, an agent that inhibits and/or blocks the interaction of TIGIT with PVR, an
agent that inhibits and/or blocks the intracellular signaling mediated by TIGIT binding to
PVR.
In some embodiments, the agent that inhibits and/or blocks the interaction of
CD226 with TIGIT is a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In
some embodiments, the agent that inhibits and/or blocks the interaction of CD226 with
TIGIT is an anti-TIGIT antibody or antigen-binding fragment thereof.
In some embodiments, the antagonist of TIGIT expression and/or activity is a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide. In some embodiments, the
antagonist of TIGIT expression and/or activity is an anti-TIGIT antibody or antigen-binding
fragment thereof.
In some embodiments, the antagonist of PVR expression and/or activity is a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVR is a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVR is a small molecule inhibitor, an inhibitory
antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an
inhibitory polypeptide.
Described herein is a combination treatment comprising an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that decreases or inhibits one or more
additional immune co-inhibitory receptors.
Described herein are methods of increasing, enhancing or stimulating an immune
response or function in an individual by administering to the individual an effective amount
of an agent that decreases or inhibits TIGIT expression and/or activity and an agent that
decreases or inhibits one or more additional immune co-inhibitory receptors.
In some embodiments, the one or more additional immune co-inhibitory receptor is
selected from the group consisting of PD-1, CTLA-4, LAG3, TIM3, BTLA and VISTA. In
some embodiments, the one or more additional immune co-inhibitory receptor is selected
from the group of PD-1, CTLA-4, LAG3 and TIM3.
Described herein is a combination treatment comprising an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that increases or activates one or more
additional immune co-stimulatory receptor.
Described herein are methods of increasing, enhancing or stimulating an immune
response or function in an individual by administering to the individual an effective amount
of an agent that decreases or inhibits TIGIT expression and/or activity and an agent that
increases or activates one or more additional immune co-stimulatory receptor.
In some embodiments, the one or more additional immune co-stimulatory receptor
is selected from the group consisting of CD226, OX-40, CD28, CD27, CD137, HVEM, and
GITR. In some embodiments, the one or more additional immune co-stimulatory receptor is
selected from the group of CD226, OX-40, CD27, CD137, HVEM and GITR. In some
embodiments, the one or more additional immune co-stimulatory receptor is selected from
the group consisting of OX-40 and CD27.
In some embodiments, any of the above methods further comprise administering at
least one chemotherapeutic agent.
In some embodiments, the individual in any of the above methods has cancer. In
some embodiments, the individual in any of the above methods is a human.
In some embodiments, the CD4 and/or CD8 T cells in the individual have increased
or enhanced priming, activation, proliferation, cytokine release and/or cytolytic activity
relative to prior to the administration of the combination.
In some embodiments, the number of CD4 and/or CD8 T cells is elevated relative to
prior to administration of the combination. In some embodiments, the number of activated
CD4 and/or CD8 T cells is elevated relative to prior to administration of the combination. In
some embodiments, the activated CD4 and/or CD8 T cells is characterized by γ-IFN
producing CD4 and/or CD8 T cells and/or enhanced cytolytic activity relative to prior to the
administration of the combination. In some embodiments, the CD4 and/or CD8 T cells
exhibit increased release of cytokines selected from the group consisting of IFN-γ, TNF-α,
and interleukins.
In some embodiments, the CD4 and/or CD8 T cell is an effector memory T cell. In
some embodiments, the CD4 and/or CD8 effector memory T cell is characterized by γ-IFN
producing CD4 and/or CD8 T cells and/or enhanced cytolytic activity. In some
embodiments, the CD4 and/or CD8 effector memory T cell is characterized by having the
high low
expression of CD44 CD62L .
In some embodiments, the cancer in any of the above methods has elevated levels of
T cell infiltration.
In some embodiments, the agent that decreases or inhibits TIGIT expression and/or
activity is selected from the group consisting of an antagonist of TIGIT expression and/or
activity, an antagonist of PVR expression and/or activity, and an agent that inhibits the
interaction and/or the intracellular signaling mediated by TIGIT binding to PVR.
In some embodiments, the antagonist of TIGIT expression and/or activity is selected
from the group consisting of a small molecule inhibitor, an inhibitory antibody or antigen-
binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide.
In some embodiments, the antagonist of PVR expression and/or activity is selected
from the group consisting of a small molecule inhibitor, an inhibitory antibody or antigen-
binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide.
In some embodiments, the agent that inhibits the intracellular signaling mediated by
TIGIT binding to PVR is selected from the group consisting of a small molecule inhibitor, an
inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In some embodiments, the antagonist of TIGIT expression and/or activity is an anti-
TIGIT antibody or antigen-binding fragment thereof.
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises at least one HVR comprising an amino acid sequence selected from the amino acid
sequences KSSQSLYYSGVKENLLA (SEQ ID NO:1), ASIRFT (SEQ ID NO:2),
QQGINNPLT (SEQ ID NO:3), GFTFSSFTMH (SEQ ID NO:4), FIRSGSGIVFYADAVRG
(SEQ ID NO:5), and RPLGHNTFDS (SEQ ID NO:6) or RSSQSLVNSYGNTFLS (SEQ ID
NO:7), GISNRFS (SEQ ID NO:8), LQGTHQPPT (SEQ ID NO:9), GYSFTGHLMN (SEQ
ID NO:10), LIIPYNGGTSYNQKFKG (SEQ ID NO:11), and GLRGFYAMDY (SEQ ID
NO:12).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises a light chain comprising the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises a heavy chain comprising the amino acid sequence set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises a light chain comprising the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14) and the antibody heavy chain comprises the amino acid sequence set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment
thereof, wherein the antibody is selected from a humanized antibody, a chimeric antibody, a
bispecific antibody, a heteroconjugate antibody, and an immunotoxin.
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises at least one HVR is at least 90% identical to an HVR set forth in any of
KSSQSLYYSGVKENLLA (SEQ ID NO:1), ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ
ID NO:3), GFTFSSFTMH (SEQ ID NO:4), FIRSGSGIVFYADAVRG (SEQ ID NO:5), and
RPLGHNTFDS (SEQ ID NO:6) or RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS
(SEQ ID NO:8), LQGTHQPPT (SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO:10),
LIIPYNGGTSYNQKFKG (SEQ ID NO:11), and GLRGFYAMDY (SEQ ID NO:12)..
In some embodiments, the anti-TIGIT antibody or fragment thereof comprises the
light chain and/or heavy chain comprising amino acid sequences at least 90% identical to the
amino acid sequences set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14), or
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16), respectively.
In some embodiments, the PD-1 axis binding antagonist is selected from the group
consisting of a PD-1 binding antagonist, a PD-L1 binding antagonist and a PD-L2 binding
antagonist.
In some embodiments, the PD-1 axis binding antagonist is a PD-1 binding
antagonist. In some embodiments, the PD-1 binding antagonist inhibits the binding of PD-1
to its ligand binding partners. In some embodiments, the PD-1 binding antagonist inhibits the
binding of PD-1 to PD-L1. In some embodiments, the PD-1 binding antagonist inhibits the
binding of PD-1 to PD-L2. In some embodiments, the PD-1 binding antagonist inhibits the
binding of PD-1 to both PD-L1 and PD-L2. In some embodiments, the PD-1 binding
antagonist is an antibody. In some embodiments, the PD-1 binding antagonist is MDX-1106
(nivolumab). In some embodiments, the PD-1 binding antagonist is Merck 3475
(lambrolizumab). In some embodiments, the PD-1 binding antagonist is CT-011
(pidilizumab). In some embodiments, the PD-1 binding antagonist is AMP-224.
In some embodiments, the PD-1 axis binding antagonist is a PD-L1 binding
antagonist. In some embodiments, the PD-L1 binding antagonist inhibits the binding of PD-
L1 to PD-1. In some embodiments, the PD-L1 binding antagonist inhibits the binding of PD-
L1 to B7-1. In some embodiments, the PD-L1 binding antagonist inhibits the binding of PD-
L1 to both PD-1 and B7-1. In some embodiments, the PD-L1 binding antagonist is an
antibody.
In some embodiments, the PD-L1 binding antagonist is selected from the group
consisting of: YW243.55.S70, MPDL3280A, MDX-1105 and MEDI 4736.
In some embodiments, the anti-PD-L1 antibody comprises a heavy chain
comprising HVR-H1 sequence of GFTFSDSWIH (SEQ ID NO:17), HVR-H2 sequence of
AWISPYGGSTYYADSVKG (SEQ ID NO:18), and HVR-H3 sequence of RHWPGGFDY
(SEQ ID NO:19); and a light chain comprising HVR-L1 sequence of RASQDVSTAVA
(SEQ ID NO:20), HVR-L2 sequence of SASFLYS (SEQ ID NO:21), and HVR-L3 sequence
of QQYLYHPAT (SEQ ID NO:22).
In some embodiments, the anti-PD-L1 antibody comprises a heavy chain variable
region comprising the amino acid sequence of
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSA (SEQ ID NO:23) and a light chain variable region comprising the amino acid
sequence of
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKR (SEQ ID
NO:24).
In some embodiments, the PD-1 axis binding antagonist is a PD-L2 binding
antagonist. In some embodiments, the PD-L2 binding antagonist is an antibody. In some
embodiments, the PD-L2 binding antagonist is an immunoadhesin.
In some embodiments, the cancer being treated is selected from the group consisting
of non-small cell lung cancer, small cell lung cancer, renal cell cancer, colorectal cancer,
ovarian cancer, breast cancer, pancreatic cancer, gastric carcinoma, bladder cancer,
esophageal cancer, mesothelioma, melanoma, head and neck cancer, thyroid cancer, sarcoma,
prostate cancer, glioblastoma, cervical cancer, thymic carcinoma, leukemia, lymphomas,
myelomas, mycoses fungoids, merkel cell cancer, and other hematologic malignancies.
In some embodiments, the agent that decreases or inhibits TIGIT expression and/or
activity is administered continuously. In some embodiments, the agent that decreases or
inhibits TIGIT expression and/or activity is administered intermittently. In some
embodiments, the agent that decreases or inhibits TIGIT expression and/or activity is
administered before the PD-1 axis binding antagonist. In some embodiments, the agent that
decreases or inhibits TIGIT expression and/or activity is administered simultaneous with the
PD-1 axis binding antagonist. In some embodiments, the agent that decreases or inhibits
TIGIT expression and/or activity is administered after the PD-1 axis binding antagonist.
Also described herein are kits comprising a PD-1 axis binding antagonist and a
package insert comprising instructions for using the PD-1 axis binding antagonist in
combination with an agent that decreases or inhibits TIGIT expression and/or activity to treat
or delay progression of cancer in an individual.
Also described herein are kits comprising a PD-1 axis binding antagonist and an
agent that decreases or inhibits TIGIT expression and/or activity, and a package insert
comprising instructions for using the PD-1 axis binding antagonist and the agent that
decreases or inhibits TIGIT expression and/or activity to treat or delay progression of cancer
in an individual.
Also described herein are kits comprising an agent that decreases or inhibits TIGIT
expression and/or activity and a package insert comprising instructions for using the agent
that decreases or inhibits TIGIT expression and/or activity in combination with a PD-1 axis
binding antagonist to treat or delay progression of cancer in an individual.
Also described herein are kits comprising a PD-1 axis binding antagonist and a
package insert comprising instructions for using the PD-1 axis binding antagonist in
combination with an agent that decreases or inhibits TIGIT expression and/or activity to
enhance immune function of an individual having cancer.
Also described herein are kits comprising a PD-1 axis binding antagonist and an
agent that decreases or inhibits TIGIT expression and/or activity, and a package insert
comprising instructions for using the PD-1 axis binding antagonist and the agent that
decreases or inhibits TIGIT expression and/or activity to enhance immune function of an
individual having cancer.
Also described herein are kits comprising an agent that decreases or inhibits TIGIT
expression and/or activity and a package insert comprising instructions for using the agent
that decreases or inhibits TIGIT expression and/or activity in combination with a PD-1 axis
binding antagonist to enhance immune function of an individual having cancer.
Also described herein are kits comprising a PD-1 axis binding antagonist and a
package insert comprising instructions for using the PD-1 axis binding antagonist in
combination with an agent that modulates the CD226 expression and/or activity to treat or
delay progression of cancer in an individual.
Also described herein are kits comprising a PD-1 axis binding antagonist and an
agent that modulates the CD226 expression and/or activity, and a package insert comprising
instructions for using the PD-1 axis binding antagonist and the agent that modulates the
CD226 expression and/or activity to treat or delay progression of cancer in an individual.
Also described herein are kits comprising an agent that modulates the CD226
expression and/or activity and a package insert comprising instructions for using the agent
modulates the CD226 expression and/or activity in combination with a PD-1 axis binding
antagonist to treat or delay progression of cancer in an individual.
Also described herein are kits comprising a PD-1 axis binding antagonist and a
package insert comprising instructions for using the PD-1 axis binding antagonist in
combination with an agent that modulates the CD226 expression and/or activity to enhance
immune function of an individual having cancer.
Also described herein are kits comprising a PD-1 axis binding antagonist and an
agent that modulates the CD226 expression and/or activity, and a package insert comprising
instructions for using the PD-1 axis binding antagonist and the agent that modulates the
CD226 expression and/or activity to enhance immune function of an individual having
cancer.
Also described herein are kits comprising an agent modulates the CD226 expression
and/or activity and a package insert comprising instructions for using the agent that
modulates the CD226 expression and/or activity in combination with a PD-1 axis binding
antagonist to enhance immune function of an individual having cancer.
In some embodiments, the kits comprising the PD-1 axis binding antagonist is an
anti-PD-L1 antibody. In some embodiments, the kits comprising the PD-1 axis binding
antagonist is an anti-PD-1 antibody. In some embodiments, the kits comprising the agent that
decreases or inhibits TIGIT expression and/or activity is selected from the group consisting
of an antagonist of TIGIT expression and/or activity, an antagonist of PVR expression and/or
activity, and an agent that inhibits the interaction and/or the intracellular signaling mediated
by TIGIT binding to PVR. In some embodiments, the kits comprising the antagonist of
TIGIT expression and/or activity is an anti-TIGIT antibody or antigen-binding fragment
thereof.
In some embodiments, the kits comprises an agent that modulates the CD226
expression and/or activity which is capable of increasing and/or stimulating CD226
expression and/or activity. In some embodiments, the kits comprising the agent that
modulates the CD226 expression and/or activity is selected from an agent that inhibits and/or
blocks the interaction of CD226 with TIGIT, an antagonist of TIGIT expression and/or
activity, an antagonist of PVR expression and/or activity, an agent that inhibits and/or blocks
the interaction of TIGIT with PVR, an agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVR. In some embodiments, the kits comprising the
agent that inhibits and/or blocks the interaction of CD226 with TIGIT and/or the antagonist
of TIGIT expression and/or activity is an anti-TIGIT antibody or antigen-binding fragment
thereof.
In certain embodiments, the present disclosure describes a method for treating or
delaying progression of cancer in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and an agent that decreases or inhibits
TIGIT expression and/or activity. In other embodiments, the present disclosure describes use
of an effective amount of a PD-1 axis binding antagonist in the manufacture of a medicament
for treating or delaying progression of cancer in an individual, wherein the PD-1 axis binding
agent is used in combination with an agent that decreases or inhibits TIGIT expression and/or
activity. In other embodiments, the present disclosure describes use of an effective amount of
an agent that decreases or inhibits TIGIT expression and/or activity in the manufacture of a
medicament for treating or delaying progression of cancer in an individual, wherein the an
agent that decreases or inhibits TIGIT expression and/or activity is used in combination with
a PD-1 axis binding antagonist. In other embodiments, the present disclosure describes a
pharmaceutical composition comprising a PD-1 axis binding antagonist for use in treating or
delaying progression of cancer in combination with an agent that decreases or inhibits TIGIT
expression and/or activity. In other embodiments, the present disclosure describes a
pharmaceutical composition comprising an agent that decreases or inhibits TIGIT expression
and/or activity for use in treating or delaying progression of cancer in combination with a
PD-1 axis binding antagonist.
In other embodiments, the present disclosure describes a method for reducing or
inhibiting cancer relapse or cancer progression in an individual comprising administering to
the individual an effective amount of a PD-1 axis binding antagonist and an agent that
decreases or inhibits TIGIT expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of a PD-1 axis binding antagonist in the
manufacture of a medicament for reducing or inhibiting cancer relapse or cancer progression
in an individual, wherein the PD-1 axis binding agent is used in combination with an agent
that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of an agent that decreases or inhibits TIGIT
expression and/or activity in the manufacture of a medicament for reducing or inhibiting
cancer relapse or cancer progression in an individual, wherein the agent that decreases or
inhibits TIGIT expression and/or activity is used in combination with a PD-1 axis binding
antagonist. In other embodiments, the present disclosure describes a pharmaceutical
composition comprising a PD-1 axis binding antagonist for use in reducing or inhibiting
cancer relapse or cancer progression in combination with an agent that decreases or inhibits
TIGIT expression and/or activity. In other embodiments, the present disclosure describes a
pharmaceutical composition comprising an agent that decreases or inhibits TIGIT expression
and/or activity for use in reducing or inhibiting cancer relapse or cancer progression in
combination with a PD-1 axis binding antagonist.
In other embodiments, the present disclosure describes a method for treating or
delaying progression of an immune related disease in an individual comprising administering
to the individual an effective amount of a PD-1 axis binding antagonist and an agent that
decreases or inhibits TIGIT expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of a PD-1 axis binding antagonist in the
manufacture of a medicament for treating or delaying progression of an immune related
disease in an individual, wherein the PD-1 axis binding agent is used in combination with an
agent that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes use of an effective amount of an agent that decreases or inhibits
TIGIT expression and/or activity in the manufacture of a medicament for treating or delaying
progression of an immune related disease in an individual, wherein the agent that decreases
or inhibits TIGIT expression and/or activity is used in combination with a PD-1 axis binding
antagonist. In other embodiments, the present disclosure describes a pharmaceutical
composition comprising a PD-1 axis binding antagonist for use in treating or delaying
progression of an immune related disease in combination with an agent that decreases or
inhibits TIGIT expression and/or activity. In other embodiments, the present disclosure
describes a pharmaceutical composition comprising an agent that decreases or inhibits TIGIT
expression and/or activity for use in treating or delaying progression of an immune related
disease in combination with a PD-1 axis binding antagonist.
In other embodiments, the present disclosure describes a combination comprising an
effective amount of a PD-1 axis binding antagonist and an agent that decreases or inhibits
TIGIT expression and/or activity.
In other embodiments, the present disclosure describes a method for reducing or
inhibiting progression of an immune related disease in an individual comprising
administering to the individual an effective amount of a PD-1 axis binding antagonist and an
agent that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes use of an effective amount of a PD-1 axis binding antagonist in
the manufacture of a medicament for reducing or inhibiting progression of an immune related
disease in an individual, wherein the PD-1 axis binding agent is used in combination with an
agent that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes use of an effective amount of an agent that decreases or inhibits
TIGIT expression and/or activity in the manufacture of a medicament for reducing or
inhibiting progression of an immune related disease in an individual, wherein the agent that
decreases or inhibits TIGIT expression and/or activity is used in combination with a PD-1
axis binding antagonist. In other embodiments, the present disclosure describes a
pharmaceutical composition comprising a PD-1 axis binding antagonist for use in reducing or
inhibiting progression of an immune related disease in combination with an agent that
decreases or inhibits TIGIT expression and/or activity. In other embodiments, the present
disclosure describes a pharmaceutical composition comprising an agent that decreases or
inhibits TIGIT expression and/or activity for use in reducing or inhibiting progression of an
immune related disease in combination with a PD-1 axis binding antagonist.
In certain embodiments that may be combined with any of the preceding
embodiments, the immune related disease is associated with a T cell dysfunctional disorder.
In certain embodiments that may be combined with any of the preceding embodiments, the
immune related disease is a viral infection. In certain embodiments that may be combined
with any of the preceding embodiments, the viral infection is a chronic viral infection. In
certain embodiments that may be combined with any of the preceding embodiments, the T
cell dysfunctional disorder is characterized by decreased responsiveness to antigenic
stimulation. In certain embodiments that may be combined with any of the preceding
embodiments, the T cell dysfunctional disorder is characterized by T cell anergy or decreased
ability to secrete cytokines, proliferate or execute cytolytic activity. In certain embodiments
that may be combined with any of the preceding embodiments, the T cell dysfunctional
disorder is characterized by T cell exhaustion. In certain embodiments that may be combined
with any of the preceding embodiments, the T cells are CD4+ and CD8+ T cells. In certain
embodiments that may be combined with any of the preceding embodiments, the immune
related disease is selected from the group consisting of unresolved acute infection, chronic
infection, and tumor immunity.
In other embodiments, the present disclosure describes a method of increasing,
enhancing or stimulating an immune response or function in an individual comprising
administering to the individual an effective amount of a PD-1 axis binding antagonist and an
agent that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes use of an effective amount of a PD-1 axis binding antagonist in
the manufacture of a medicament for enhancing or stimulating an immune response or
function in an individual, wherein the PD-1 axis binding agent is used in combination with an
agent that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes use of an effective amount of an agent that decreases or inhibits
TIGIT expression and/or activity in the manufacture of a medicament for enhancing or
stimulating an immune response or function in an individual, wherein the agent that decreases
or inhibits TIGIT expression and/or activity is used in combination with a PD-1 axis binding
antagonist. In other embodiments, the present disclosure describes a pharmaceutical
composition comprising a PD-1 axis binding antagonist for use in enhancing or stimulating
an immune response or function in combination with an agent that decreases or inhibits
TIGIT expression and/or activity. In other embodiments, the present disclosure describes a
pharmaceutical composition comprising an agent that decreases or inhibits TIGIT expression
and/or activity for use in enhancing or stimulating an immune response or function in
combination with a PD-1 axis binding antagonist. In other embodiments, the present
disclosure describes a combination comprising an effective amount of a PD-1 axis binding
antagonist and an agent that decreases or inhibits TIGIT expression and/or activity.
In other embodiments, the present disclosure describes a method of treating or
delaying progression of cancer in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and an agent that modulates CD226
expression and/or activity. In other embodiments, the present disclosure describes use of an
effective amount of a PD-1 axis binding antagonist in the manufacture of a medicament for
treating or delaying progression of cancer in an individual, wherein the PD-1 axis binding
agent is used in combination with an agent that modulates CD226 expression and/or activity.
In other embodiments, the present disclosure describes use of an effective amount of an agent
that modulates CD226 expression and/or activity in the manufacture of a medicament for
treating or delaying progression of cancer in an individual, wherein the agent that modulates
CD226 expression and/or activity is used in combination with a PD-1 axis binding antagonist.
In other embodiments, the present disclosure describes a pharmaceutical composition
comprising a PD-1 axis binding antagonist for use in treating or delaying progression of
cancer in combination with an agent that modulates CD226 expression and/or activity. In
other embodiments, the present disclosure describes a pharmaceutical composition
comprising an agent that modulates CD226 expression and/or activity for use in treating or
delaying progression of cancer in combination with a PD-1 axis binding antagonist.
In other embodiments, the present disclosure describes a method for reducing or
inhibiting cancer relapse or cancer progression in an individual comprising administering to
the individual an effective amount of a PD-1 axis binding antagonist and an agent that
modulates CD226 expression and/or activity. In other embodiments, the present disclosure
describes use of an effective amount of a PD-1 axis binding antagonist in the manufacture of
a medicament for reducing or inhibiting cancer relapse or cancer progression in an individual,
wherein the PD-1 axis binding agent is used in combination with an agent that modulates
CD226 expression and/or activity. In other embodiments, the present disclosure describes use
of an effective amount of an agent that modulates CD226 expression and/or activity in the
manufacture of a medicament for reducing or inhibiting cancer relapse or cancer progression
in an individual, wherein the agent that modulates CD226 expression and/or activity is used
in combination with a PD-1 axis binding antagonist. In other embodiments, the present
disclosure describes a pharmaceutical composition comprising a PD-1 axis binding antagonist
for use in reducing or inhibiting cancer relapse or cancer progression in combination with an
agent that modulates CD226 expression and/or activity. In other embodiments, the present
disclosure describes a pharmaceutical composition comprising an agent that modulates
CD226 expression and/or activity for use in reducing or inhibiting cancer relapse or cancer
progression in combination with a PD-1 axis binding antagonist.
In other embodiments, the present disclosure describes a method for treating or
delaying progression of an immune related disease in an individual comprising administering
to the individual an effective amount of a PD-1 axis binding antagonist and an agent that
modulates CD226 expression and/or activity. In other embodiments, the present disclosure
describes use of an effective amount of a PD-1 axis binding antagonist in the manufacture of
a medicament for treating or delaying progression of an immune related disease in an
individual, wherein the PD-1 axis binding agent is used in combination with an agent that
modulates CD226 expression and/or activity. In other embodiments, the present disclosure
describes use of an effective amount of an agent that modulates CD226 expression and/or
activity in the manufacture of a medicament for treating or delaying progression of an
immune related disease in an individual, wherein the agent that modulates CD226 expression
and/or activity is used in combination with a PD-1 axis binding antagonist. In other
embodiments, the present disclosure describes a pharmaceutical composition comprising a
PD-1 axis binding antagonist for use in treating or delaying progression of an immune related
disease in combination with an agent that modulates CD226 expression and/or activity. In
other embodiments, the present disclosure describes a pharmaceutical composition
comprising an agent that modulates CD226 expression and/or activity for use in treating or
delaying progression of an immune related disease in combination with a PD-1 axis binding
antagonist.
In other embodiments, the present disclosure describes a combination comprising an
effective amount of a PD-1 axis binding antagonist and an agent that modulates CD226
expression and/or activity.
In other embodiments, the present disclosure describes a method for reducing or
inhibiting progression of an immune related disease in an individual comprising
administering to the individual an effective amount of a PD-1 axis binding antagonist and an
agent that modulates CD226 expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of a PD-1 axis binding antagonist in the
manufacture of a medicament for reducing or inhibiting progression of an immune related
disease in an individual, wherein the PD-1 axis binding agent is used in combination with an
agent that modulates CD226 expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of an agent that modulates CD226 expression
and/or activity in the manufacture of a medicament for reducing or inhibiting progression of
an immune related disease in an individual, wherein the agent that modulates CD226
expression and/or activity is used in combination with a PD-1 axis binding antagonist. In
other embodiments, the present disclosure describes a pharmaceutical composition
comprising a PD-1 axis binding antagonist for use in reducing or inhibiting progression of an
immune related disease in combination with an agent that modulates CD226 expression
and/or activity. In other embodiments, the present disclosure describes a pharmaceutical
composition comprising an agent that modulates CD226 expression and/or activity for use in
reducing or inhibiting progression of an immune related disease in combination with a PD-1
axis binding antagonist.
In certain embodiments that may be combined with any of the preceding
embodiments, the immune related disease is associated with a T cell dysfunctional disorder.
In certain embodiments that may be combined with any of the preceding embodiments, the
immune related disease is a viral infection. In certain embodiments that may be combined
with any of the preceding embodiments, the viral infection is a chronic viral infection. In
certain embodiments that may be combined with any of the preceding embodiments, the T
cell dysfunctional disorder is characterized by decreased responsiveness to antigenic
stimulation. In certain embodiments that may be combined with any of the preceding
embodiments, the T cell dysfunctional disorder is characterized by T cell anergy, or
decreased ability to secrete cytokines, proliferate or execute cytolytic activity. In certain
embodiments that may be combined with any of the preceding embodiments, the T cell
dysfunctional disorder is characterized by T cell exhaustion. In certain embodiments that
may be combined with any of the preceding embodiments, the T cells are CD4+ and CD8+ T
cells. In certain embodiments that may be combined with any of the preceding embodiments,
the immune related disease is selected from the group consisting of unresolved acute
infection, chronic infection and tumor immunity.
In other embodiments, the present disclosure describes a method of increasing,
enhancing, or stimulating an immune response or function in an individual comprising
administering to the individual an effective amount of a PD-1 axis binding antagonist and an
agent that modulates CD226 expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of a PD-1 axis binding antagonist in the
manufacture of a medicament for enhancing or stimulating an immune response or function
in an individual, wherein the PD-1 axis binding agent is used in combination with an agent
that modulates CD226 expression and/or activity. In other embodiments, the present
disclosure describes use of an effective amount of an agent that modulates CD226 expression
and/or activity in the manufacture of a medicament for enhancing or stimulating an immune
response or function in an individual, wherein the an agent that modulates CD226 expression
and/or activity is used in combination with a PD-1 axis binding antagonist. In other
embodiments, the present disclosure describes a pharmaceutical composition comprising a
PD-1 axis binding antagonist for use in enhancing or stimulating an immune response or
function in combination with an agent that modulates CD226 expression and/or activity. In
other embodiments, the present disclosure describes a pharmaceutical composition
comprising an agent that modulates CD226 expression and/or activity for use in enhancing or
stimulating an immune response or function in combination with a PD-1 axis binding
antagonist. In other embodiments, the present disclosure describes a combination comprising
an effective amount of a PD-1 axis binding antagonist and an agent that modulates CD226
expression and/or activity.
In certain embodiments that may be combined with any of the preceding
embodiments, the agent that modulates CD226 expression and/or activity is an agent that
increases and/or stimulates CD226 expression and/or activity. In certain embodiments that
may be combined with any of the preceding embodiments, the agent that modulates CD226
expression and/or activity is an agent that increases and/or stimulates the interaction of
CD226 with PVR. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that modulates CD226 expression and/or activity is an agent that
increases and/or stimulates the intracellular signaling mediated by CD226 binding to PVR.
In certain embodiments that may be combined with any of the preceding embodiments, the
agent that modulates CD226 expression and/or activity is selected from the group consisting
of an agent that inhibits and/or blocks the interaction of CD226 with TIGIT, an antagonist of
TIGIT expression and/or activity, an antagonist of PVR expression and/or activity, an agent
that inhibits and/or blocks the interaction of TIGIT with PVR, an agent that inhibits and/or
blocks the interaction of TIGIT with PVRL2, an agent that inhibits and/or blocks the
interaction of TIGIT with PVRL3, an agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVR, an agent that inhibits and/or blocks the
intracellular signaling mediated by TIGIT binding to PVRL2, an agent that inhibits and/or
blocks the intracellular signaling mediated by TIGIT binding to PVRL3, and combinations
thereof. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that modulates CD226 expression and/or activity is an agent that
inhibits and/or blocks the interaction of CD226 with TIGIT. In certain embodiments that
may be combined with any of the preceding embodiments, the agent that inhibits and/or
blocks the interaction of CD226 with TIGIT is a small molecule inhibitor, an inhibitory
antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, or an
inhibitory polypeptide. In certain embodiments that may be combined with any of the
preceding embodiments, the agent that inhibits and/or blocks the interaction of CD226 with
TIGIT is an anti-TIGIT antibody or antigen-binding fragment thereof. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
inhibits and/or blocks the interaction of CD226 with TIGIT is an inhibitory nucleic acid
selected from the group consisting of an antisense polynucleotide, an interfering RNA, a
catalytic RNA, and an RNA-DNA chimera. In certain embodiments that may be combined
with any of the preceding embodiments, the antisense polynucleotide targets TIGIT. In
certain embodiments that may be combined with any of the preceding embodiments, the
interfering RNA targets TIGIT. In certain embodiments that may be combined with any of
the preceding embodiments, the catalytic RNA targets TIGIT. In certain embodiments that
may be combined with any of the preceding embodiments, the RNA-DNA chimera targets
TIGIT. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that modulates CD226 expression and/or activity is an antagonist of
TIGIT expression and/or activity. In certain embodiments that may be combined with any of
the preceding embodiments, the antagonist of TIGIT expression and/or activity is a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide. In certain embodiments that may be
combined with any of the preceding embodiments, the antagonist of TIGIT expression and/or
activity is an anti-TIGIT antibody or antigen-binding fragment thereof. In certain
embodiments that may be combined with any of the preceding embodiments, the antagonist
of TIGIT expression and/or activity is an inhibitory nucleic acid selected from the group
consisting of an antisense polynucleotide, an interfering RNA, a catalytic RNA, and an RNA-
DNA chimera. In certain embodiments that may be combined with any of the preceding
embodiments, the antagonist of PVR expression and/or activity is selected from the group
consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
inhibits and/or blocks the interaction of TIGIT with PVR is selected from the group
consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
inhibits and/or blocks the interaction of TIGIT with PVRL2 is selected from the group
consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
inhibits and/or blocks the interaction of TIGIT with PVRL3 is selected from the group
consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
inhibits and/or blocks the intracellular signaling mediated by TIGIT binding to PVR is
selected from the group consisting of a small molecule inhibitor, an inhibitory antibody or
antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that inhibits and/or blocks the interaction of TIGIT with PVRL2 is
selected from the group consisting of a small molecule inhibitor, an inhibitory antibody or
antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that inhibits and/or blocks the interaction of TIGIT with PVRL3 is
selected from the group consisting of a small molecule inhibitor, an inhibitory antibody or
antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide.
In other embodiments, the present disclosure describes a method of increasing,
enhancing, or stimulating an immune response or function in an individual comprising
administering to the individual an effective amount of an agent that decreases or inhibits
TIGIT expression and/or activity and an agent that decreases or inhibits one or more
additional immune co-inhibitory receptors. In other embodiments, the present disclosure
describes use of an effective amount of an agent that decreases or inhibits TIGIT expression
and/or activity in the manufacture of a medicament for enhancing or stimulating an immune
response or function in an individual, wherein the agent that decreases or inhibits TIGIT
expression and/or activity is used in combination with an agent that decreases or inhibits one
or more additional immune co-inhibitory receptors. In other embodiments, the present
disclosure describes use of an effective amount of an agent that decreases or inhibits one or
more additional immune co-inhibitory receptors in the manufacture of a medicament for
enhancing or stimulating an immune response or function in an individual, wherein the agent
that decreases or inhibits one or more additional immune co-inhibitory receptors is used in
combination with an agent that decreases or inhibits TIGIT expression and/or activity. In
other embodiments, the present disclosure describes a pharmaceutical composition
comprising an agent that decreases or inhibits TIGIT expression and/or activity for use in
enhancing or stimulating an immune response or function in combination with an agent that
decreases or inhibits one or more additional immune co-inhibitory receptors. In other
embodiments, the present disclosure describes a pharmaceutical composition comprising an
agent that decreases or inhibits one or more additional immune co-inhibitory receptors for use
in enhancing or stimulating an immune response or function in combination with an agent
that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes a combination comprising an effective amount of an agent that
decreases or inhibits TIGIT expression and/or activity and an agent that decreases or inhibits
one or more additional immune co-inhibitory receptors. In certain embodiments that may be
combined with any of the preceding embodiments, the one or more additional immune co-
inhibitory receptor is selected from the group consisting of PD-1, CTLA-4, LAG3, TIM3,
BTLA, VISTA, B7H4, and CD96. In certain embodiments that may be combined with any
of the preceding embodiments, the one or more additional immune co-inhibitory receptor is
selected from the group consisting of PD-1, CTLA-4, LAG3 and TIM3.
In other embodiments, the present disclosure describes a method of increasing,
enhancing, or stimulating an immune response or function in an individual comprising
administering to the individual an effective amount of an agent that decreases or inhibits
TIGIT expression and/or activity and an agent that increases or activates one or more
additional immune co-stimulatory receptors. In other embodiments, the present disclosure
describes use of an effective amount of an agent that decreases or inhibits TIGIT expression
and/or activity in the manufacture of a medicament for enhancing or stimulating an immune
response or function in an individual, wherein the agent that decreases or inhibits TIGIT
expression and/or activity is used in combination with an agent that increases or activates one
or more additional immune co-stimulatory receptors. In other embodiments, the present
disclosure describes use of an effective amount of an a agent that increases or activates one or
more additional immune co-stimulatory receptors in the manufacture of a medicament for
enhancing or stimulating an immune response or function in an individual, wherein the a
agent that increases or activates one or more additional immune co-stimulatory receptors is
used in combination with an agent that decreases or inhibits TIGIT expression and/or activity.
In other embodiments, the present disclosure describes a pharmaceutical composition
comprising an agent that decreases or inhibits TIGIT expression and/or activity for use in
enhancing or stimulating an immune response or function in combination with an agent that
increases or activates one or more additional immune co-stimulatory receptors. In other
embodiments, the present disclosure describes a pharmaceutical composition comprising an
agent that increases or activates one or more additional immune co-stimulatory receptors for
use in enhancing or stimulating an immune response or function in combination with an agent
that decreases or inhibits TIGIT expression and/or activity. In other embodiments, the
present disclosure describes a combination comprising an effective amount of an agent that
decreases or inhibits TIGIT expression and/or activity and an agent that increases or activates
one or more additional immune co-stimulatory receptors. In certain embodiments that may be
combined with any of the preceding embodiments, the one or more additional immune co-
stimulatory receptors is selected from the group consisting of CD226, OX-40, CD28, CD27,
CD137, HVEM, GITR, MICA, ICOS, NKG2D, and 2B4. In certain embodiments that may
be combined with any of the preceding embodiments, the one or more additional immune co-
stimulatory receptors is selected from the group consisting of CD226, OX-40, CD27, CD137,
HVEM and GITR. In certain embodiments that may be combined with any of the preceding
embodiments, the one or more additional immune co-stimulatory receptors is selected from
the group consisting of OX-40 and CD27.
In certain embodiments that may be combined with any of the preceding
embodiments, the method further comprises administering at least one chemotherapeutic
agent. In certain embodiments that may be combined with any of the preceding embodiments,
the individual has cancer. In certain embodiments that may be combined with any of the
preceding embodiments, the individual is a human. In certain embodiments that may be
combined with any of the preceding embodiments, CD4 and/or CD8 T cells in the individual
have increased or enhanced priming, activation, proliferation, cytokine release and/or
cytolytic activity relative to prior to the administration of the combination. In certain
embodiments that may be combined with any of the preceding embodiments, the number of
CD4 and/or CD8 T cells is elevated relative to prior to administration of the combination. In
certain embodiments that may be combined with any of the preceding embodiments, the
number of activated CD4 and/or CD8 T cells is elevated relative to prior to administration of
the combination. In certain embodiments that may be combined with any of the preceding
embodiments, activated CD4 and/or CD8 T cells are characterized by γ-IFN producing CD4
and/or CD8 T cells and/or enhanced cytolytic activity relative to prior to the administration of
the combination. In certain embodiments that may be combined with any of the preceding
embodiments, the CD4 and/or CD8 T cells exhibit increased release of cytokines selected
from the group consisting of IFN- γ, TNF-α and interleukins. In certain embodiments that
may be combined with any of the preceding embodiments, the CD4 and/or CD8 T cells are
effector memory T cells. In certain embodiments that may be combined with any of the
preceding embodiments, the CD4 and/or CD8 effector memory T cells are characterized by γ-
IFN producing CD4 and/or CD8 T cells and/or enhanced cytolytic activity. In certain
embodiments that may be combined with any of the preceding embodiments, the CD4 and/or
high
CD8 effector memory T cells are characterized by having the expression of CD44
CD62L . In certain embodiments that may be combined with any of the preceding
embodiments, the cancer has elevated levels of T cell infiltration. In certain embodiments
that may be combined with any of the preceding embodiments, the agent that decreases or
inhibits TIGIT expression and/or activity is selected from the group consisting of an
antagonist of TIGIT expression and/or activity, an antagonist of PVR expression and/or
activity, an agent that inhibits and/or blocks the interaction of TIGIT with PVR, an agent that
inhibits and/or blocks the interaction of TIGIT with PVRL2, an agent that inhibits and/or
blocks the interaction of TIGIT with PVRL3, an agent that inhibits and/or blocks the
intracellular signaling mediated by TIGIT binding to PVR, an agent that inhibits and/or
blocks the intracellular signaling mediated by TIGIT binding to PVRL2, an agent that inhibits
and/or blocks the intracellular signaling mediated by TIGIT binding to PVRL3, and
combinations thereof. In certain embodiments that may be combined with any of the
preceding embodiments, the antagonist of TIGIT expression and/or activity is selected from
the group consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In
certain embodiments that may be combined with any of the preceding embodiments, the
antagonist of PVR expression and/or activity is selected from the group consisting of a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that inhibits and/or blocks the
interaction of TIGIT with PVR is selected from the group consisting of a small molecule
inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an
inhibitory nucleic acid, and an inhibitory polypeptide. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that inhibits and/or blocks the
interaction of TIGIT with PVRL2 is selected from the group consisting of a small molecule
inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an
inhibitory nucleic acid, and an inhibitory polypeptide. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that inhibits and/or blocks the
interaction of TIGIT with PVRL3 is selected from the group consisting of a small molecule
inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an
inhibitory nucleic acid, and an inhibitory polypeptide. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that inhibits and/or blocks the
intracellular signaling mediated by TIGIT binding to PVR is selected from the group
consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
inhibits and/or blocks the intracellular signaling mediated by TIGIT binding to PVRL2 is
selected from the group consisting of a small molecule inhibitor, an inhibitory antibody or
antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that inhibits and/or blocks the intracellular signaling mediated by
TIGIT binding to PVRL3 is selected from the group consisting of a small molecule inhibitor,
an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide. In certain embodiments that may be combined with any
of the preceding embodiments, the antagonist of TIGIT expression and/or activity is an
inhibitory nucleic acid selected from the group consisting of an antisense polynucleotide, an
interfering RNA, a catalytic RNA, and an RNA-DNA chimera. In certain embodiments that
may be combined with any of the preceding embodiments, the antisense polynucleotide
targets TIGIT.
In certain embodiments that may be combined with any of the preceding
embodiments, the interfering RNA targets TIGIT. In certain embodiments that may be
combined with any of the preceding embodiments, the catalytic RNA targets TIGIT. In
certain embodiments that may be combined with any of the preceding embodiments, the
RNA-DNA chimera targets TIGIT. In certain embodiments that may be combined with any
of the preceding embodiments, the antagonist of TIGIT expression and/or activity is an anti-
TIGIT antibody or antigen-binding fragment thereof. In certain embodiments that may be
combined with any of the preceding embodiments, the anti-TIGIT antibody or antigen-
binding fragment thereof comprises at least one HVR comprising an amino acid sequence
selected from the amino acid sequences (1) KSSQSLYYSGVKENLLA (SEQ ID NO:1),
ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ ID NO:3), GFTFSSFTMH (SEQ ID NO:4),
FIRSGSGIVFYADAVRG (SEQ ID NO:5), and RPLGHNTFDS (SEQ ID NO:6); or
(2) RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS (SEQ ID NO:8), LQGTHQPPT
(SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO:10), LIIPYNGGTSYNQKFKG (SEQ ID
NO:11), and GLRGFYAMDY (SEQ ID NO:12). In certain embodiments that may be
combined with any of the preceding embodiments, the anti-TIGIT antibody or antigen-
binding fragment thereof, wherein the antibody light chain comprises the amino acid
sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGD
GTKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISN
RFSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK
(SEQ ID NO:14). In certain embodiments that may be combined with any of the preceding
embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof, wherein the
antibody heavy chain comprises the amino acid sequence set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSG
IVFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQ
GTLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNG
GTSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWG
QGTSVTVSS (SEQ ID NO:16). In certain embodiments that may be combined with any of
the preceding embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof,
wherein the antibody light chain comprises the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGD
GTKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISN
RFSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK
(SEQ ID NO:14), and the antibody heavy chain comprises the amino acid sequence set forth
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSG
IVFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQ
GTLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNG
GTSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWG
QGTSVTVSS (SEQ ID NO: 16). In certain embodiments that may be combined with any of
the preceding embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof,
wherein the antibody is selected from the group consisting of a humanized antibody, a
chimeric antibody, a bispecific antibody, a heteroconjugate antibody, and an immunotoxin.
In certain embodiments that may be combined with any of the preceding embodiments, the
anti-TIGIT antibody or antigen-binding fragment thereof comprises at least one HVR that is
at least 90% identical to an HVR set forth in any one of (1) KSSQSLYYSGVKENLLA (SEQ
ID NO:1), ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ ID NO:3), GFTFSSFTMH (SEQ
ID NO:4), FIRSGSGIVFYADAVRG (SEQ ID NO:5), and RPLGHNTFDS (SEQ ID NO:6);
or (2) RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS (SEQ ID NO:8), LQGTHQPPT
(SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO:10), LIIPYNGGTSYNQKFKG (SEQ ID
NO:11), and GLRGFYAMDY (SEQ ID NO:12). In certain embodiments that may be
combined with any of the preceding embodiments, the anti-TIGIT antibody or fragment
thereof comprises the light chain comprising amino acid sequences at least 90% identical to
the amino acid sequences set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGD
GTKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISN
RFSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK
(SEQ ID NO:14); and/or the heavy chain comprising amino acid sequences at least 90%
identical to the amino acid sequences set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSG
IVFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQ
GTLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNG
GTSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWG
QGTSVTVSS (SEQ ID NO:16). In certain embodiments that may be combined with any of
the preceding embodiments, the PD-1 axis binding antagonist is selected from the group
consisting of a PD-1 binding antagonist, a PD-L1 binding antagonist and a PD-L2 binding
antagonist. In certain embodiments that may be combined with any of the preceding
embodiments, the PD-1 axis binding antagonist is a PD-1 binding antagonist. In certain
embodiments that may be combined with any of the preceding embodiments, the PD-1
binding antagonist inhibits the binding of PD-1 to its ligand binding partners. In certain
embodiments that may be combined with any of the preceding embodiments, the PD-1
binding antagonist inhibits the binding of PD-1 to PD-L1. In certain embodiments that may
be combined with any of the preceding embodiments, the PD-1 binding antagonist inhibits
the binding of PD-1 to PD-L2. In certain embodiments that may be combined with any of the
preceding embodiments, the PD-1 binding antagonist inhibits the binding of PD-1 to both
PD-L1 and PD-L2. In certain embodiments that may be combined with any of the preceding
embodiments, the PD-1 binding antagonist is an antibody. In certain embodiments that may
be combined with any of the preceding embodiments, the PD-1 binding antagonist is MDX-
1106. In certain embodiments that may be combined with any of the preceding
embodiments, the PD-1 binding antagonist is MK-3475. In certain embodiments that may be
combined with any of the preceding embodiments, the PD-1 binding antagonist is CT-011.
In certain embodiments that may be combined with any of the preceding embodiments, the
PD-1 binding antagonist is AMP-224. In certain embodiments that may be combined with
any of the preceding embodiments, the PD-1 axis binding antagonist is a PD-L1 binding
antagonist. In certain embodiments that may be combined with any of the preceding
embodiments, the PD-L1 binding antagonist inhibits the binding of PD-L1 to PD-1. In
certain embodiments that may be combined with any of the preceding embodiments, the PD-
L1 binding antagonist inhibits the binding of PD-L1 to B7-1. In certain embodiments that
may be combined with any of the preceding embodiments, the PD-L1 binding antagonist
inhibits the binding of PD-L1 to both PD-1 and B7-1. In certain embodiments that may be
combined with any of the preceding embodiments, the PD-L1 binding antagonist is an anti-
PD-L1 antibody. In certain embodiments that may be combined with any of the preceding
embodiments, the PD-L1 binding antagonist is selected from the group consisting of
YW243.55.S70, MPDL3280A, MDX-1105, and MEDI4736. In certain embodiments that
may be combined with any of the preceding embodiments, the anti-PD-L1antibody comprises
a heavy chain comprising HVR-H1 sequence of GFTFSDSWIH (SEQ ID NO:17), HVR-H2
sequence of AWISPYGGSTYYADSVKG (SEQ ID NO:18), and HVR-H3 sequence of
RHWPGGFDY (SEQ ID NO:19); and a light chain comprising HVR-L1 sequence of
RASQDVSTAVA (SEQ ID NO:20), HVR-L2 sequence of SASFLYS (SEQ ID NO:21), and
HVR-L3 sequence of QQYLYHPAT (SEQ ID NO:22). In certain embodiments that may be
combined with any of the preceding embodiments, the anti-PD-L1antibody comprises a
heavy chain variable region comprising the amino acid sequence of
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSA (SEQ ID NO:23),
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSSASTK (SEQ ID NO:40), or
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSS (SEQ ID NO:41), and a light chain variable region comprising the amino acid
sequence of
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKR (SEQ ID
NO:24). In certain embodiments that may be combined with any of the preceding
embodiments, the PD-1 axis binding antagonist is a PD-L2 binding antagonist. In certain
embodiments that may be combined with any of the preceding embodiments, the PD-L2
binding antagonist is an antibody. In certain embodiments that may be combined with any of
the preceding embodiments, the PD-L2 binding antagonist is an immunoadhesin. In certain
embodiments that may be combined with any of the preceding embodiments, the cancer is
selected from the group consisting of non-small cell lung cancer, small cell lung cancer, renal
cell cancer, colorectal cancer, ovarian cancer, breast cancer, pancreatic cancer, gastric
carcinoma, bladder cancer, esophageal cancer, mesothelioma, melanoma, head and neck
cancer, thyroid cancer, sarcoma, prostate cancer, glioblastoma, cervical cancer, thymic
carcinoma, leukemia, lymphomas, myelomas, mycoses fungoids, merkel cell cancer, and
other hematologic malignancies. In certain embodiments that may be combined with any of
the preceding embodiments, the agent that decreases or inhibits TIGIT expression and/or
activity is administered continuously. In certain embodiments that may be combined with
any of the preceding embodiments, the agent that decreases or inhibits TIGIT expression
and/or activity is administered intermittently. In certain embodiments that may be combined
with any of the preceding embodiments, the agent that decreases or inhibits TIGIT expression
and/or activity is administered before the PD-1 axis binding antagonist. In certain
embodiments that may be combined with any of the preceding embodiments, the agent that
decreases or inhibits TIGIT expression and/or activity is administered simultaneous with the
PD-1 axis binding antagonist. In certain embodiments that may be combined with any of the
preceding embodiments, the agent that decreases or inhibits TIGIT expression and/or activity
is administered after the PD-1 axis binding antagonist. In certain embodiments that may be
combined with any of the preceding embodiments, the PD-1 axis binding antagonist is
administered before the agent that modulates CD226 expression and/or activity. In certain
embodiments that may be combined with any of the preceding embodiments, the PD-1 axis
binding antagonist is administered simultaneous with the agent that modulates CD226
expression and/or activity. In certain embodiments that may be combined with any of the
preceding embodiments, the PD-1 axis binding antagonist is administered after the agent that
modulates CD226 expression and/or activity. In certain embodiments that may be combined
with any of the preceding embodiments, the agent that decreases or inhibits TIGIT expression
and/or activity is administered before the agent that decreases or inhibits one or more
additional immune co-inhibitory receptors. In certain embodiments that may be combined
with any of the preceding embodiments, the agent that decreases or inhibits TIGIT expression
and/or activity is administered simultaneous with the agent that decreases or inhibits one or
more additional immune co-inhibitory receptors. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that decreases or inhibits TIGIT
expression and/or activity is administered after the agent that decreases or inhibits one or
more additional immune co-inhibitory receptors. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that decreases or inhibits TIGIT
expression and/or activity is administered before the agent that increases or activates one or
more additional immune co-stimulatory receptors. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that decreases or inhibits TIGIT
expression and/or activity is administered simultaneous with the agent that increases or
activates one or more additional immune co-stimulatory receptors. In certain embodiments
that may be combined with any of the preceding embodiments, the agent that decreases or
inhibits TIGIT expression and/or activity is administered after the agent that increases or
activates one or more additional immune co-stimulatory receptors.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and a package insert comprising instructions for using the PD-1 axis
binding antagonist in combination with an agent that decreases or inhibits TIGIT expression
and/or activity to treat or delay progression of cancer in an individual.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and an agent that decreases or inhibits TIGIT expression and/or activity,
and a package insert comprising instructions for using the PD-1 axis binding antagonist and
the agent that decreases or inhibits TIGIT expression and/or activity to treat or delay
progression of cancer in an individual.
In other embodiments, the present disclosure describes a kit comprising an agent
that decreases or inhibits TIGIT expression and/or activity and a package insert comprising
instructions for using the agent that decreases or inhibits TIGIT expression and/or activity in
combination with a PD-1 axis binding antagonist to treat or delay progression of cancer in an
individual.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and a package insert comprising instructions for using the PD-1 axis
binding antagonist in combination with an agent that decreases or inhibits TIGIT expression
and/or activity to enhance immune function of an individual having cancer.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and an agent that decreases or inhibits TIGIT expression and/or activity,
and a package insert comprising instructions for using the PD-1 axis binding antagonist and
the agent that decreases or inhibits TIGIT expression and/or activity to enhance immune
function of an individual having cancer.
In other embodiments, the present disclosure describes a kit comprising an agent
that decreases or inhibits TIGIT expression and/or activity and a package insert comprising
instructions for using the agent that decreases or inhibits TIGIT expression and/or activity in
combination with a PD-1 axis binding antagonist to enhance immune function of an
individual having cancer.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and a package insert comprising instructions for using the PD-1 axis
binding antagonist in combination with an agent that modulates CD226 expression and/or
activity to treat or delay progression of cancer in an individual.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and an agent that modulates CD226 expression and/or activity, and a
package insert comprising instructions for using the PD-1 axis binding antagonist and the
agent that modulates CD226 expression and/or activity to treat or delay progression of cancer
in an individual.
In other embodiments, the present disclosure describes a kit comprising an agent
that modulates CD226 expression and/or activity and a package insert comprising
instructions for using the agent modulates CD226 expression and/or activity in combination
with a PD-1 axis binding antagonist to treat or delay progression of cancer in an individual.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and a package insert comprising instructions for using the PD-1 axis
binding antagonist in combination with an agent that modulates CD226 expression and/or
activity to enhance immune function of an individual having cancer.
In other embodiments, the present disclosure describes a kit comprising a PD-1 axis
binding antagonist and an agent that modulates CD226 expression and/or activity, and a
package insert comprising instructions for using the PD-1 axis binding antagonist and the
agent that modulates CD226 expression and/or activity to enhance immune function of an
individual having cancer.
In other embodiments, the present disclosure describes a kit comprising an agent
modulates CD226 expression and/or activity and a package insert comprising instructions for
using the agent that modulates CD226 expression and/or activity in combination with a PD-1
axis binding antagonist to enhance immune function of an individual having cancer.
In certain embodiments that may be combined with any of the preceding
embodiments, the PD-1 axis binding antagonist is an anti-PD-L1 antibody. In certain
embodiments that may be combined with any of the preceding embodiments, the anti-PD-L1
antibody is selected from the group consisting of YW243.55.S70, MPDL3280A, MDX-1105
and MEDI4736. In certain embodiments that may be combined with any of the preceding
embodiments, the anti-PD-L1antibody comprises a heavy chain comprising HVR-H1
sequence of GFTFSDSWIH (SEQ ID NO:17), HVR-H2 sequence of
AWISPYGGSTYYADSVKG (SEQ ID NO:18), and HVR-H3 sequence of RHWPGGFDY
(SEQ ID NO:19); and a light chain comprising HVR-L1 sequence of RASQDVSTAVA
(SEQ ID NO:20), HVR-L2 sequence of SASFLYS (SEQ ID NO:21), and HVR-L3 sequence
of QQYLYHPAT (SEQ ID NO:22). In certain embodiments that may be combined with any
of the preceding embodiments, the anti-PD-L1antibody comprises a heavy chain variable
region comprising the amino acid sequence of
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSA (SEQ ID NO:23),
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSSASTK (SEQ ID NO:40), or
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSS (SEQ ID NO:41), and a light chain variable region comprising the amino acid
sequence of
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKR (SEQ ID
NO:24). In certain embodiments that may be combined with any of the preceding
embodiments, the PD-1 axis binding antagonist is an anti-PD-1 antibody. In certain
embodiments that may be combined with any of the preceding embodiments, the anti-PD-1
antibody is MDX-1106, MK-3475, or CT-011. In certain embodiments that may be
combined with any of the preceding embodiments, the PD-1 axis binding antagonist is AMP-
224. In certain embodiments that may be combined with any of the preceding embodiments,
the PD-1 axis binding antagonist is a PD-L2 binding antagonist. In certain embodiments that
may be combined with any of the preceding embodiments, the PD-L2 binding antagonist is
an antibody. In certain embodiments that may be combined with any of the preceding
embodiments, the PD-L2 binding antagonist is an immunoadhesin.
In other embodiments, the present disclosure describes a kit comprising an agent
that decreases or inhibits TIGIT expression and/or activity and a package insert comprising
instructions for using the agent that decreases or inhibits TIGIT expression and/or activity in
combination with an agent that decreases or inhibits one or more additional immune co-
inhibitory receptors to treat or delay progression of cancer in an individual. In other
embodiments, the present disclosure describes a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that decreases or inhibits one or more
additional immune co-inhibitory receptors, and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity and the agent that
decreases or inhibits one or more additional immune co-inhibitory receptors to treat or delay
progression of cancer in an individual. In other embodiments, the present disclosure
describes a kit comprising an agent that decreases or inhibits one or more additional immune
co-inhibitory receptors and a package insert comprising instructions for using the agent that
decreases or inhibits one or more additional immune co-inhibitory receptors in combination
with an agent that decreases or inhibits TIGIT expression and/or activity to treat or delay
progression of cancer in an individual. In other embodiments, the present disclosure
describes a kit comprising an agent that decreases or inhibits TIGIT expression and/or
activity and a package insert comprising instructions for using the agent that decreases or
inhibits TIGIT expression and/or activity in combination with an agent that decreases or
inhibits one or more additional immune co-inhibitory receptors to enhance immune function
of an individual having cancer. In other embodiments, the present disclosure describes a kit
comprising an agent that decreases or inhibits TIGIT expression and/or activity and an agent
that decreases or inhibits one or more additional immune co-inhibitory receptors, and a
package insert comprising instructions for using the agent that decreases or inhibits TIGIT
expression and/or activity and the agent that decreases or inhibits one or more additional
immune co-inhibitory receptors to enhance immune function of an individual having cancer.
In other embodiments, the present disclosure describes a kit comprising an agent that
decreases or inhibits one or more additional immune co-inhibitory receptors and a package
insert comprising instructions for using the agent that decreases or inhibits one or more
additional immune co-inhibitory receptors in combination with an agent that decreases or
inhibits TIGIT expression and/or activity to enhance immune function of an individual
having cancer. In certain embodiments that may be combined with any of the preceding
embodiments, the one or more additional immune co-inhibitory receptor is selected from the
group consisting of PD-1, CTLA-4, LAG3, TIM3, BTLA, VISTA, B7H4, and CD96. In
certain embodiments that may be combined with any of the preceding embodiments, the one
or more additional immune co-inhibitory receptor is selected from the group consisting of
PD-1, CTLA-4, LAG3 and TIM3.
In other embodiments, the present disclosure describes a kit comprising an agent
that decreases or inhibits TIGIT expression and/or activity and a package insert comprising
instructions for using the agent that decreases or inhibits TIGIT expression and/or activity in
combination with an agent that increases or activates one or more additional immune co-
stimulatory receptors to treat or delay progression of cancer in an individual. In other
embodiments, the present disclosure describes a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that increases or activates one or more
additional immune co-stimulatory receptors, and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity and the agent that
increases or activates one or more additional immune co-stimulatory receptors to treat or
delay progression of cancer in an individual. In other embodiments, the present disclosure
describes a kit comprising an agent that increases or activates one or more additional immune
co-stimulatory receptors and a package insert comprising instructions for using the agent that
increases or activates one or more additional immune co-stimulatory receptors in
combination with an agent that decreases or inhibits TIGIT expression and/or activity to treat
or delay progression of cancer in an individual. In other embodiments, the present disclosure
describes a kit comprising an agent that decreases or inhibits TIGIT expression and/or
activity and a package insert comprising instructions for using the agent that decreases or
inhibits TIGIT expression and/or activity in combination with an agent that increases or
activates one or more additional immune co-stimulatory receptors to enhance immune
function of an individual having cancer. In other embodiments, the present disclosure
describes a kit comprising an agent that decreases or inhibits TIGIT expression and/or
activity and an agent that increases or activates one or more additional immune co-
stimulatory receptors, and a package insert comprising instructions for using the agent that
decreases or inhibits TIGIT expression and/or activity and the agent that increases or
activates one or more additional immune co-stimulatory receptors to enhance immune
function of an individual having cancer. In other embodiments, the present disclosure
describes a kit comprising an agent that increases or activates one or more additional immune
co-stimulatory receptors and a package insert comprising instructions for using the agent that
increases or activates one or more additional immune co-stimulatory receptors in
combination with an agent that decreases or inhibits TIGIT expression and/or activity to
enhance immune function of an individual having cancer. In certain embodiments that may
be combined with any of the preceding embodiments, the or more additional immune co-
stimulatory receptor is selected from the group consisting of CD226, OX-40, CD28, CD27,
CD137, HVEM, GITR, MICA, ICOS, NKG2D, and 2B4. In certain embodiments that may
be combined with any of the preceding embodiments, the one or more additional immune co-
stimulatory receptor is selected from the group consisting of CD226, OX-40, CD27, CD137,
HVEM and GITR. In certain embodiments that may be combined with any of the preceding
embodiments, the one or more additional immune co-stimulatory receptor is selected from
the group consisting of OX-40 and CD27.
In certain embodiments that may be combined with any of the preceding
embodiments, the individual is a human. In certain embodiments that may be combined with
any of the preceding embodiments, the agent that decreases or inhibits TIGIT expression
and/or activity is selected from the group consisting of an antagonist of TIGIT expression
and/or activity, an antagonist of PVR expression and/or activity, an agent that inhibits and/or
blocks the interaction of TIGIT with PVR, an agent that inhibits and/or blocks the interaction
of TIGIT with PVRL2, an agent that inhibits and/or blocks the interaction of TIGIT with
PVRL3, an agent that inhibits and/or blocks the intracellular signaling mediated by TIGIT
binding to PVR, an agent that inhibits and/or blocks the intracellular signaling mediated by
TIGIT binding to PVRL2, and an agent that inhibits and/or blocks the intracellular signaling
mediated by TIGIT binding to PVRL3. In certain embodiments that may be combined with
any of the preceding embodiments, the antagonist of TIGIT expression and/or activity is an
anti-TIGIT antibody or antigen-binding fragment thereof. In certain embodiments that may
be combined with any of the preceding embodiments, the agent that modulates CD226
expression and/or activity is an agent that increases and/or stimulates CD226 expression
and/or activity. In certain embodiments that may be combined with any of the preceding
embodiments, the agent that modulates CD226 expression and/or activity is an agent that
increases and/or stimulates the interaction of CD226 with PVR. In certain embodiments that
may be combined with any of the preceding embodiments, the agent that modulates CD226
expression and/or activity is an agent that increases and/or stimulates the intracellular
signaling mediated by CD226 binding to PVR. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that modulates CD226
expression and/or activity is selected from the group consisting of an agent that inhibits
and/or blocks the interaction of CD226 with TIGIT, an antagonist of TIGIT expression and/or
activity, an antagonist of PVR expression and/or activity, an agent that inhibits and/or blocks
the interaction of TIGIT with PVR, an agent that inhibits and/or blocks the interaction of
TIGIT with PVRL2, an agent that inhibits and/or blocks the interaction of TIGIT with
PVRL3, an agent that inhibits and/or blocks the intracellular signaling mediated by TIGIT
binding to PVR, an agent that inhibits and/or blocks the intracellular signaling mediated by
TIGIT binding to PVRL2, and an agent that inhibits and/or blocks the intracellular signaling
mediated by TIGIT binding to PVRL3. In certain embodiments that may be combined with
any of the preceding embodiments, the agent that modulates CD226 expression and/or
activity is an agent that inhibits and/or blocks the interaction of CD226 with TIGIT. In
certain embodiments that may be combined with any of the preceding embodiments, the
agent that inhibits and/or blocks the interaction of CD226 with TIGIT is a small molecule
inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an
inhibitory nucleic acid, or an inhibitory polypeptide. In certain embodiments that may be
combined with any of the preceding embodiments, the agent that inhibits and/or blocks the
interaction of CD226 with TIGIT is an anti-TIGIT antibody or antigen-binding fragment
thereof. In certain embodiments that may be combined with any of the preceding
embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof comprises at least
one HVR comprising an amino acid sequence selected from the amino acid sequences (1)
KSSQSLYYSGVKENLLA (SEQ ID NO:1), ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ
ID NO:3), GFTFSSFTMH (SEQ ID NO:4), FIRSGSGIVFYADAVRG (SEQ ID NO:5), and
RPLGHNTFDS (SEQ ID NO:6); or (2) RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS
(SEQ ID NO:8), LQGTHQPPT (SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO:10),
LIIPYNGGTSYNQKFKG (SEQ ID NO:11), and GLRGFYAMDY (SEQ ID NO:12). In
certain embodiments that may be combined with any of the preceding embodiments, the anti-
TIGIT antibody or antigen-binding fragment thereof, wherein the antibody light chain
comprises the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGD
GTKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISN
RFSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK
(SEQ ID NO:14). In certain embodiments that may be combined with any of the preceding
embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof, wherein the
antibody heavy chain comprises the amino acid sequence set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSG
IVFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQ
GTLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNG
GTSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWG
QGTSVTVSS (SEQ ID NO:16). In certain embodiments that may be combined with any of
the preceding embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof,
wherein the antibody light chain comprises the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGD
GTKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISN
RFSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK
(SEQ ID NO:14), and the antibody heavy chain comprises the amino acid sequence set forth
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSG
IVFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQ
GTLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNG
GTSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWG
QGTSVTVSS (SEQ ID NO: 16).
BRIEF DESCRIPTION OF THE DRAWINGS
shows that TIGIT is highly expressed on exhausted CD8+ and CD4+ T
cells. depicts MACS-enriched C57BL6/J splenic CD8+ T cells that were stimulated
with plate-bound anti-CD3 and anti-CD28 for 24-48 hours in vitro. Flow cytometry
histograms representative of TIGIT expression (red) relative to isotype staining (gray).
Quantitation of TIGIT MFI is also shown. ***, P < 0.001. Data are representative of 2
independent experiments; n = 3. In -1C, C57BL6/J mice were infected with
Armstrong strain LCMV, and splenocytes were analyzed 7 days after infection. Data are
representative of 2 independent experiments; n = 5. shows flow cytometry
low high
histogram representative of TIGIT expression by naïve (CD44 CD62L ) and effector
high low
memory (CD44 CD62L ) CD4+ and CD8+ T cells. Quantitation of TIGIT MFI is also
shown. ***, P < 0.001. shows flow cytometry histogram representative of TIGIT
high low
expression by PD-1 and PD-1 effector memory CD8+ T cells. Quantitation of TIGIT
MFI is also shown. ***, P < 0.001. shows that C57BL6/J mice were briefly depleted
of CD4+ T cells and infected with Clone 13 strain LCMV. Splenocytes were analyzed 42
days after infection. Flow cytometry histogram representative of TIGIT expression by naïve
low high high high high
(CD44 CD62L ), central memory (CD44 CD62L ), and effector memory (CD44
CD62L ) CD8+ T cells. Quantitation of TIGIT MFI is also shown. ***, P < 0.001. Data are
representative of 2 independent experiments; n = 5. Error bars depict the standard error of the
mean.
loxP/loxP
shows the design of TIGIT mice. Exon 1 of TIGIT was flanked by
loxP sites using standard techniques.
shows that TIGIT-deficient CD8 and CD4 T cells respond normally to
fl/fl cre fl/fl
acute viral infection. TIGIT CD4 (CKO) and TIGIT littermates (WT) were infected
with Armstrong strain LCMV. Splenocytes were analyzed 7 days after infection. Data are
representative of two independent experiments; n = 5. shows representative FACS
+ high
plots gated on CD8 T cells, with activated (CD44 ) cells boxed. Quantitation of activated
CD8 T cells as a percentage of total CD8 T cells. shows representative FACS
plots gated on CD8 T cells after stimulation in vitro, with IFNγ-producing cells boxed.
Quantitation of IFNg-producing cells as a percentage of total CD8 T cells. shows
+ high
representative FACS plots gated on CD4 T cells, with activated (CD44 ) cells boxed.
Quantitation of activated CD4 T cells as a percentage of total CD4 T cells. shows
representative FACS plots gated on CD4 T cells after stimulation in vitro, with IFNg-
producing cells boxed. Quantitation of IFNg-producing cells as a percentage of total CD4 T
cells. Error bars depict the standard error of the mean.
shows that TIGIT and PD-1 synergistically regulate the effector function of
fl/fl fl/fl
exhausted T cells in vivo. In -4E, TIGIT CD4-cre- (WT) and TIGIT CD4-cre+
(CKO) mice were briefly depleted of CD4+ T cells and infected with Clone 13 strain LCMV.
Splenocytes and liver viral titers were analyzed 42 days after infection. Data are
representative of 2 independent experiments, and n = 6-9 per group. depicts
high low
representative FACS plots gated on CD8+ T cells, with activated cells (CD44 CD62L )
boxed. Quantitation of activated cells as a percentage of total CD8+ T cells. depicts
representative FACS plots gated on CD8+ T cells after stimulation in vitro, with IFNγ+ cells
boxed. Quantitation of IFNγ-producing cells as a percentage of CD8+ T cells.
high
depicts representative FACS plots gated on CD4+ T cells, with activated cells (CD44
CD62L ) boxed. Quantitation of activated cells as a percentage of total CD4+ T cells. depicts representative FACS plots gated on CD4+ T cells after stimulation in vitro, with
IFNγ+ cells boxed. Quantitation of IFNγ-producing cells as a percentage of CD4+ T cells.
depicts quantitation of liver LCMV titers. ***, P < 0.0001. In -4H,
C57BL6/J mice were briefly depleted of CD4+ T cells and infected with Clone 13 strain
LCMV. Mice were treated with isotype-matched control, anti-PD-L1, anti-TIGIT, or anti-PD-
L1 + anti-TIGIT antibodies starting 28 days after infection. Splenocytes and liver viral titers
were analyzed 42 days after infection. Data are representative of 2 independent experiments;
n = 10. depicts representative FACS plots gated on CD8+ T cells, with activated
high low
cells (CD44 CD62L ) boxed. Quantitation of activated cells as a percentage of total
CD8+ T cells. ***, P < 0.0001. depicts representative FACS plots gated on
activated CD8+ T cells after stimulation in vitro, with IFNγ+ cells boxed. Quantitation of
IFNγ-producing cells as a percentage of activated CD8+ T cells. *. P = 0.0352. **, P =
0.0047. depicts quantitation of liver LCMV titers. *, P = 0.0106. **, P = 0.0047.
Error bars depict the standard error of the mean.
shows TIGIT/PD-L1 co-blockade enhances CD4+ T cell effector function
during chronic viral infection. C57BL6/J mice were depleted of CD4+ T cells and infected
with Clone 13 strain LCMV. Mice were treated with isotype control, anti-PD-L1, anti-TIGIT,
or anti-PD-L1 + anti-TIGIT antibodies from 28 days after infection. Splenocytes and liver
viral titers were analyzed 42 days after infection. Data are representative of 2 independent
experiments; n = 10. depicts representative FACS plots gated on CD4+ T cells, with
high low
activated cells (CD44 CD62L ) boxed. Quantitation of activated CD4+ T cells as a
percentage of total CD4+ T cells. depicts representative FACS plots gated on CD4+
T cells after stimulation in vitro, with IFNγ-producing cells boxed. Quantitation of IFNγ-
producing cells as a percentage of total CD4+ T cells. *, P = 0.019. Error bars depict the
standard error of the mean.
shows TIGIT expression is elevated in human breast cancer and correlated
with expression of CD8 and inhibitory co-receptors. Breast cancer gene expression
microarray data generated by the Cancer Gene Atlas Network was analyzed. Gene expression
data is normalized and expressed as relative ratios (log2). depicts TIGIT expression
in normal and all breast tumor samples (left) and in breast tumor subtypes (right). ***, P =
6x10-12. Box and whisker plots are shown. depicts correlation of TIGIT and CD3ε
expression. R2 = 0.61. depicts the correlation of TIGIT and CD8α (left, R2 = 0.80)
or CD4 (right, R2 = 0.42). depicts the correlation of TIGIT and PD-1 (left, R =
0.87), LAG3 (center, R = 0.80), and CTLA4 (right, R = 0.76).
shows that TIGIT and PD-1 inhibit anti-tumor T cell responses. In -
7B, BALB/C mice were inoculated with CT26 colorectal carcinoma cells. Splenocytes and
tumor-infiltrating lymphocytes (TILs) were analyzed 14 days after inoculation, when tumors
had reached approximately 200mm in size. Data are representative of one experiment; n = 6.
depicts flow cytometry histogram representative of TIGIT expression by splenic and
tumor-infiltrating CD8+ T cells. Quantitation of TIGIT MFI is also shown. **, P = 0.0023.
depicts flow cytometry histogram representative of TIGIT expression by splenic and
tumor-infiltrating CD4+ T cells. Quantitation of TIGIT MFI is also shown. ***, P = 0.0002.
In -7E, BALB/C mice were inoculated with CT26 colorectal carcinoma cells. When
tumors reached approximately 200mm3 in size, mice were treated with isotype control, anti-
PD-L1, anti-TIGIT, or anti-PD-L1 + anti-TIGIT antibodies for three weeks. Data are
representative of two independent experiments; n = 10-20 (-7D) or 7-10 ().
depicts median CT26 tumor volumes over time. depicts mouse survival.
shows that approximately 60 days after initial inoculation, mice in complete
remission (CR) that had received anti-TIGIT + anti-PD-L1, as well as naïve BALB/c mice,
were inoculated with CT26 cells in their left thoracic flanks and inoculated with EMT6 breast
carcinoma cells in their mammary fat pads. Median (left) and individual (right) tumor
volumes for CT26 (squares) and EMT6 (triangles) in CR mice (purple and green) and naïve
mice (black and orange) tumors are shown. shows that mice were inoculated with
CT26 tumors and treated as in . Tumor-infiltrating and tumor-draining lymph node
resident T cells were analyzed by flow cytometry. Representative FACS plots of CD8+ TILs
after stimulation in vitro, with IFNγ-producing cells boxed. Quantitation of IFNγ-producing
CD8+ TILs as a percentage of total CD8+ TILs. ***, P = 0.0003. Data are representative of
two independent experiments; n = 5. Error bars depict the standard error of the mean.
shows CT26 tumor-infiltrating lymphocyte TIGIT expression is correlated
with Tim-3 expression. BALB/C mice were inoculated with CT26 colorectal carcinoma
cells. Splenocytes and tumor-infiltrating lymphocytes (TILs) were analyzed approximately
14 days after inoculation, when tumors had reached approximately 200mm in size. Data are
representative of one experiment; n = 6. depicts representative histogram of TIGIT
expression by splenic and tumor-infiltrating CD8 T cells. Quantitation of TIGIT MFI. **, P
= 0.0026. depicts representative histogram of TIGIT expression by splenic and
tumor-infiltrating CD4 T cells. Quantitation of TIGIT MFI. ***, P < 0.0001. Error bars
depict the standard error of the mean.
shows MC38 tumor-infiltrating lymphocyte TIGIT expression is correlated
with PD-1 and Tim-3 expression. C57BL6/J mice were inoculated with MC38 colorectal
carcinoma cells. Splenocytes and tumor-infiltrating lymphocytes (TILs) were analyzed
approximately 14 days after inoculation, when tumors had reached approximately 200mm in
size. Data are representative of one experiment; n = 5. depicts representative
histogram of TIGIT expression by splenic and tumor-infiltrating CD8 T cells. Quantitation
of TIGIT MFI. ***, P < 0.0001. depicts representative histogram of TIGIT
expression by splenic and tumor-infiltrating CD4 T cells. Quantitation of TIGIT MFI. *, P =
0.0136. **, P = 0.0029. Error bars depict the standard error of the mean.
shows CT26 tumor growth in mice treated with anti-PD-L1 and/or anti-
TIGIT. Naïve BALB/c mice were inoculated with CT26 tumor cells and treated with anti-PD-
L1 and/or anti-TIGIT or isotype-matched control antibodies, as described in -4F.
Tumor volumes over time for individual mice in each treatment group are shown. Data are
representative of two independent experiments.
shows flow cytometric analysis of CD4 TILs and tumor-draining lymph
node T cells. BALB/C mice were inoculated with CT26 colorectal carcinoma cells. When
tumors reached approximately 200mm in size, mice were treated with isotype control, anti-
PD-L1, anti-TIGIT, or anti-PD-L1 + anti-TIGIT antibodies for 7 days. Tumors and tumor-
draining lymph nodes were harvested. Data are representative of two independent
experiments; n = 5. Representative FACS plots gated on tumor-draining lymph node CD8 T
cells after stimulation in vitro, with IFNγ-producing cells boxed. Quantitation of IFNγ cells
as a percentage of total CD8 T cells. ***, P < 0.001. Quantitation of CD8 T cells as a
high low
percentage of total TILs. **, P = 0.0065. Quantitation of activated (CD44 CD62L )
+ + +
CD8 T cells as a percentage of total CD8 TILs. *, P = 0.012. Quantitation of CD8 T cells
as a percentage of total tumor-draining lymph node cells. Quantitation of activated CD8 T
cells as a percentage of total CD8 T cells in the tumor-draining lymph node. *, P < 0.05.
C depicts quantitation of CD4 T cells as a percentage of total TILs. *, P = 0.016.
D depicts quantitation of activated CD4 T cells as a percentage of total CD4 TILs.
E depicts quantitation of CD4 T cells as a percentage of total tumor-draining lymph
node cells. F depicts quantitation of activated CD4 T cells as a percentage of total
CD4 T cells in the tumor-draining lymph node. A depicts quantitation of IFNγ cells
as a percentage of CD4 TILs after stimulation in vitro. B depicts quantitation of
IFNγ cells as a percentage of CD4 T cells in the tumor-draining lymph node after
stimulation in vitro. Error bars depict the standard error of the mean.
shows further flow cytometric analysis of CD8 TILs. BALB/C mice were
inoculated with CT26 colorectal carcinoma cells and treated with isotype control, anti-PD-
L1, anti-TIGIT, or anti-PD-L1 + anti-TIGIT antibodies as described in Tumors were
harvested after 7 days of treatment and analyzed by flow cytometry. Data are representative
of two independent experiments; n = 5. A depicts quantitation of TNFα cells as a
percentage of total CD8 TILs. **, P < 0.01. B depicts quantitation of CD8 TILs as
high
a percentage of total TILs. **, P < 0.01. C depicts quantitation of activated (CD44
low + +
CD62L ) CD8 TILs as a percentage of total CD8 TILs. *, P < 0.05. Error bars depict the
standard error of the mean.
shows flow cytometric analysis of tumor-draining lymph node resident
CD8 T cells. BALB/C mice were inoculated with CT26 colorectal carcinoma cells and
treated with isotype control, anti-PD-L1, anti-TIGIT, or anti-PD-L1 + anti-TIGIT antibodies
as described in Tumor-draining lymph nodes were harvested after 7 days of treatment
and analyzed by flow cytometry. Data are representative of two independent experiments; n =
. A depicts representative FACS plots gated on tumor-draining lymph node resident
CD8 T cells after stimulation in vitro, with IFNγ-producing cells boxed. Quantitation of
IFNγ cells as a percentage of total CD8 T cells. ***, P < 0.001. B depicts
quantitation of CD8 T cells as a percentage of total cells in the tumor-draining lymph node.
high low +
C depicts quantitation of activated (CD44 CD62L ) CD8 T cells as a percentage
of total CD8 T cells. *, P < 0.05. Error bars depict the standard error of the mean. D
depicts quantitation of TNF α-producing cells as a percentage of total tumor-draining lymph
node CD8 T cells.
shows co-expression of CD226 and TIGIT by tumor-infiltrating CD8+ T
cells. C57BL6/J mice were inoculated with MC38 colorectal carcinoma cells. Splenocytes
and tumor-infiltrating lymphocytes (TILs) were analyzed approximately 14 days after
inoculation, when tumors had reached approximately 200mm in size. Representative
histogram of CD226 expression by splenic B cells (gray), splenic CD8+ T cells (blue), and
TIGIT+ tumor-infiltrating CD8+ T cells (red). Data are representative of two independent
experiments; n = 5.
shows CD226 and TIGIT Co-Immunoprecipate (co-IP) on transfected cells.
COS7 cells were co-transfected with expression plasmids containing the cDNA for either
TIGIT-HA (5ng) or CD226-Flag (10ng) tagged proteins, or a control plasmid (pRK).
Following transfection, the cells were washed and centrifuged and cell pellets lysed. The
resultant supernatant was pre-cleared and centrifuged and then equally split into two tubes
and immuno-precipitated with either an anti-HA or an anti-flag using standard procedures.
The immune-precipitated proteins were subjected to SDS-PAGE and western blotted.
Western blots were probed with either anti-Flag-HRP or anti-HA-HRP.
shows TIGIT and CD226 interact in primary CD8+ T cells. MACS-
enriched splenic C57BL6/J CD8+ T cells were stimulated with plate-bound anti-CD3 and
anti-CD28 antibodies and recombinant IL-2 for 48 hours and lysed. Cell lysates were
immunoprecipitated with anti-TIGIT and probed with anti-CD226. Lanes: molecular weight
ladder (1), input (2), co-immunoprecipitation flow-through (3), and co-immunoprecipitate.
Arrow denotes the expected molecular weight of CD226.
shows that detection of TIGIT/CD226 interaction by TR-FRET. A
depicts the dissociation of Flag-ST-CD226 homodimers by HA-TIGIT. FRET ratio between
Flag-ST-CD226 measured on COS-7 cells expressing a constant amount of Flag-ST-CD226
and increasing concentrations of HA-TIGIT. B depicts FRET ratio between Flag-ST-
CD226 recorded after a 15-min incubation of either PBS (white bar) or anti-TIGIT antibody
(black bar). C depicts the association of Flag-ST-CD226 with HA-TIGIT. FRET
intensity between Flag-ST-CD226 and HA-TIGIT over the Flag-ST-CD226 expression as
measured by an anti-Flag ELISA on the same batch of transfected COS-7 cells. D
depicts FRET variation between Flag-ST-CD226 and HA-TIGIT after a 15-min incubation of
PBS (white bar) or anti-TIGIT antibody (black bar). Data in A and C are representative of 4
independent experiments, each performed in triplicate. Data in B and D are representative of
2 independent experiments, each performed in triplicate.
shows cell surface expression of Flag-ST-CD226 and HA-TIGIT. Anti-
Flag and anti-HA ELISA on intact COS-7 cells expressing the indicated tagged-constructs.
Data are representative of 3 independent experiments, each performed in triplicate.
shows that CD226 blockade reverses the enhanced anti-viral T cell
response induced by TIGIT/PD-L1 co-blockade. In A-19D, C57BL6/J mice were
briefly depleted of CD4 T cells and infected with Clone 13 strain LCMV. Mice were treated
with isotype-matched control, anti-CD226, anti-PD-L1 + anti-TIGIT, or anti-PD-L1 + anti-
TIGIT + anti-CD226 antibodies starting 28 days after infection. Splenocytes and liver viral
titers were analyzed 42 days after infection. A depicts quantitation of CD8 T cells as
a percentage of splenocytes. B depicts quantitation of activated CD8 T cells as a
percentage of total CD8 T cells. ***, P < 0.001. C depicts quantitation of IFNg-
producing cells as a percentage of activated CD8 T cells. ***, P < 0.001. D depicts
quantitation of liver LCMV titers. ***, P < 0.001. Error bars depict the standard error of the
mean.
shows that TIGIT expression is elevated in human cancer and strongly
correlated with CD8 and PD-1. Gene expression analyses of human cancers were performed
as described in Example 11. Scatter plots show per-gene count data, normalized by library
size. Box and whisker plots show the variance stabilized expression ratio of TIGIT and
CD3e. A depicts the correlation of TIGIT and CD3e RNA expression in LUSC
(grey) and normal lung (black). ρ = 0.86. Quantification of TIGIT/CD3e expression ratios is
also shown. LUSC ratio increase = 372%. ***, P = 1.46 x 10 . B depicts the
correlation of TIGIT and CD3e RNA expression in COAD (grey) and normal colon (black).
ρ = 0.83. Quantification of TIGIT/CD3e expression ratios is also shown. COAD ratio
increase = 116%. ***, P = 3.66 x 10 . C depicts the correlation of TIGIT and CD3e
RNA expression in UCEC (grey) and normal uterine endrometrium (black). ρ = 0.87.
Quantification of TIGIT/CD3e expression ratios is also shown. UCEC ratio increase = 419%.
***, P = 7.41 x 10 . D depicts the correlation of TIGIT and CD3e RNA expression
in BRCA (grey) and normal breast (black). ρ = 0.82. Quantification of TIGIT/CD3e
expression ratios is also shown. BRCA ratio increase = 313%. ***, P = 4.6 x 10 . E
depicts the correlation of TIGIT and CD3e RNA expression in kidney renal clear cell
carcinoma (grey) and normal kidney (black). ρ = 0.94. Quantification of TIGIT/CD3e
expression ratios is also shown. F depicts the correlation of TIGIT and CD8A (left)
or TIGIT and CD4 (right) in lung squamous cell carcinoma (grey) and normal lung (black). ρ
= 0.77 and 0.48 respectively. G depicts the correlation of TIGIT and PD-1 (Pdcd1)
in lung squamous cell carcinoma (grey) and normal lung (black). ρ = 0.82. H depicts
the correlation of TIGIT and CD226 in lung squamous cell carcinoma (red) and normal lung
(black). ρ = 0.64.
shows analysis of T cell-associated gene expression in Lung Squamous
Cell Carcinoma (LUSC). Gene expression in LUSC and normal tissue samples was analyzed
as described in Example 11 and a heat map of the genes best correlated with the gene
signature in LUSC samples was generated. Genes and samples were both clustered using
hierarchical clustering using Ward linkage on the Euclidean distance matrix for the centered
and scaled expression data.
shows that TIGIT and PD-1 are coordinately expressed by human and
murine tumor-infiltrating lymphocytes. A-22C shows analysis of lymphocytes from a
freshly resected human NSCLC tumor, tumor-matched peripheral blood, and normal donor
peripheral blood. Data are representative of two independently analyzed tumors. A
depicts representative FACS plots representative of TIGIT expression by peripheral and
tumor-infiltrating CD8 T cells, with TIGIT cells boxed. B depicts representative
FACS plots representative of TIGIT expression by peripheral and tumor-infiltrating CD4 T
cells, with TIGIT cells boxed. C depicts flow cytometry histogram representative of
high low +
TIGIT expression by PD-1 (red) and PD-1 (blue) NSCLC-infiltrating CD8 (left) and
CD4 (right) T cells. In D-22G, BALB/C mice were inoculated with syngeneic CT26
colorectal carcinoma cells. Splenocytes and tumor-infiltrating lymphocytes (TILs) were
analyzed 14 days after inoculation, when tumors had reached approximately 200 mm in size.
Data are representative of two independent experiments; n = 5-6. D depicts
representative FACS plot of TIGIT expression by tumor-infiltrating CD8 T cells, with
TIGIT cells boxed. E depicts representative FACS plot of TIGIT expression by
tumor-infiltrating CD4 T cells, with TIGIT cells boxed. Quantitation of the frequency of
TIGIT T cells as a percentage of all T cells. *, P = 0.0134. ***, P < 0.0001. F
high
depicts flow cytometry histogram representative of TIGIT expression by PD-1 and PD-
low + +
1 tumor-infiltrating CD8 T cells and by splenic CD8 T cells. Quantitation of TIGIT MFI
is also shown. **, P = 0.0023. G depicts flow cytometry histogram representative of
high low +
TIGIT expression by PD-1 and PD-1 tumor-infiltrating CD4 T cells and by splenic
CD4 T cells. Quantitation of TIGIT MFI is also shown. ***, P = 0.0002. Error bars depict
the standard error of the mean.
shows characterization of TIGIT expression by human tumor-infiltrating T
cells. A-23B depict FACS plots showing TIGIT expression by NSCLC tumor-
infiltrating CD8+ and CD4+ T cells (A) and by donor-matched PBMC CD8+ and
CD4+ T cells (B), with TIGIT+ cells boxed. C-23D depict FACS plots
showing TIGIT expression by CRC tumor-infiltrating CD8+ and CD4+ T cells (C)
and by donor-matched PBMC CD8+ and CD4+ T cells (D), with TIGIT+ cells
boxed.
shows that the TIGIT:CD226 interaction is not driven by PVR
TIGIT:CD226 and TIGIT Q56R:CD226 interactions were detected by TR-FRET and the
FRET ratio between Flag-ST-CD226 and HA-TIGIT or HA-TIGIT Q56R shows that WT and
Q56R TIGIT bind CD226 with the same efficacy. Data are representative of three
independent experiments performed in triplicate.
shows that efficacy of TIGIT/PD-L1 antibody co-blockade in mice bearing
MC38 tumors. In A-25C, MC38 tumor-bearing mice were generated as above and
treated with blocking antibodies against PD-L1 (red), TIGIT (blue), TIGIT and PD-L1
(purple) or isotype-matched control antibodies (black) for three weeks. N = 10 (control, anti-
PD-L1 alone, anti-TIGIT alone) or 20 (anti-TIGIT + anti-PD-L1). A depicts median
(left) and individual (right) MC38 tumor volumes over time. B depicts MC38 tumor
volumes after 14 days of antibody treatment. ***, P = 0.0005. **, P = 0.0093. *, P = 0.0433.
C depicts mouse survival over time. Error bars depict the standard error of the mean.
shows that further characterization of TIGIT expression by murine tumor-
infiltrating T cells. A depicts that splenic C57BL6/J CD8 T cells were enriched by
MACS and cultured with plate-coated anti-CD3 and anti-CD28 agonist antibodies.
Representative histograms of TIGIT (red) and isotype-matched control (solid gray) staining
over time. Quantitation of TIGIT MFI. ***, P < 0.001. Stimulated cells inducibly expressed
PD-1 and constitutively expressed CD226 (data not shown). Data are representative of two
independent experiments; n = 5. In B-26E, wildtype C57BL6/J mice were
subcutaneously inoculated with syngeneic MC38 colorectal carcinoma cells. Tumors were
allowed to grow without intervention until they reached 150-200 mm in size. Data are
representative of two independent experiments; n = 5. B depicts representative FACS
plot of tumor-infiltrating CD8 T cells, with TIGIT cells boxed. Quantitation of the
frequency of TIGIT cells as a percentage of all tumor-infiltrating or splenic CD8 T cells.
***, P < 0.0001. C depicts representative FACS plot of tumor-infiltrating CD4 T
cells, with TIGIT cells boxed. Quantitation of the frequency of TIGIT cells as a percentage
of all tumor-infiltrating or splenic CD4 T cells. ***, P < 0.0001. D depicts
high low
representative histogram of TIGIT expression by PD-1 and PD-1 tumor-infiltrating
CD8 T cells (red and blue, respectively) and by splenic CD8 T cells (gray). Quantitation of
TIGIT MFI. ***, P < 0.0001. E depicts representative histogram of TIGIT
high low + +
expression by PD-1 and PD-1 tumor-infiltrating CD4 T cells and by splenic CD4 T
cells. Quantitation of TIGIT MFI. *, P = 0.0136. **, P = 0.0029. Error bars depict the
standard error of the mean.
shows that tumor-infiltrating CD8 and CD4 T cells maintain a high level
of CD226 expression. Wildtype BALB/c mice were inoculated with CT26 tumor cells as
described herein. After tumors have grown to approximately 150-200 mm in size, tumors
and spleens were analyzed by flow cytometry. A depicts quantitation of CD226
+ + + +
CD8 T cells, CD4 T cells, and non-T cells, as a percentage of all CD8 T cells, CD4 T
cells, and non-T cells respectively. B depicts representative histograms of CD226
expression in tumor and spleen. Data are representative of two independent experiments; n =
. Error bars depict the standard error of the mean.
shows that TIGIT suppression of CD8 T cell responses is dependent on
CD226. BALB/C mice were subcutaneously inoculated with CT26 colorectal carcinoma
cells in their right thoracic flanks. When tumors reached approximately 200mm in size,
mice were treated with isotype control (black), anti-CD226 (orange), anti-PD-L1 (red), anti-
TIGIT + anti-PD-L1 (purple), or anti-TIGIT + anti-PD-L1 + anti-CD226 (green) antibodies
for three weeks. Data are representative of one experiment; n = 10 (A-B) or 5 (C-F). A depicts median (left) and individual (right) CT26 tumor volumes over time. B
depicts mouse survival over time. In FIG 28C-28F, after 7 days of treatment, tumor-
infiltrating lymphocytes and tumor-draining lymph node-resident lymphocytes were assessed
by flow cytometry. FIG 28C depicts quantitation of IFNγ-producing CD8 TILs as a
percentage of total CD8 TILs after stimulation in vitro. **, P < 0.01. FIG 28D depicts
quantitation of IFNγ-producing cells as a percentage of total CD8 T cells after stimulation in
vitro. *, P < 0.05. FIG 28E depicts quantitation of CD8 TILs as a percentage of total TILs.
**, P < 0.01. FIG 28F depicts quantitation of CD8 T cells as a percentage of all tumor-
draining lymph node-resident lymphocytes. Error bars depict the standard error of the mean.
shows that TIGIT impairs CD226 function by directly disrupting CD226
+ fl/fl
homodimerization. A depicts that CD8 T cells were MACS-enriched from TIGIT
cre fl/fl wt
CD4 (CKO) and TIGIT CD4 (WT) littermates and stimulated in the presence of anti-
CD226 or isotype-matched control antibodies as indicated. H -thymidine uptake is shown as
a ratio of cells cultured with anti-CD3 + PVR-Fc to cells cultured with anti-CD3 alone. **, P
= 0.0061. ***, P < 0.0001. Data are representative of two independent experiments; n = 5.
B depicts that wildtype C57BL6/J CD8 T cells were MACS-enriched and stimulated
in the presence of anti-TIGIT, anti-CD226, and/or isotype-matched control antibodies as
indicated. H -thymidine uptake is shown as a ratio of cells cultured with anti-CD3 + PVR-Fc
to cells cultured with anti-CD3 alone. ***, P < 0.001 in paired t tests. C depicts that
primary human CD8 T cells were MACS-enriched from blood and stimulated with sub-
optimal levels of plate-bound anti-CD3 in the presence or absence of human recombinant
PVR-Fc. Anti-TIGIT antibodies or isotype-matched control antibodies were added as
indicated. Quantitation of H-thymidine uptake. **, P = 0.0071 and 0.0014 respectively.
D depicts that CHO cells were transiently transfected with increasing concentrations
of acceptor and donor FLAG-ST-CD226, as indicated. Quantification of FRET intensity
relative to donor emission. Data are representative of three independent experiments; n = 3.
In E-29F, CHO cells were transiently transfected with FLAG-ST-CD226 and with
increasing concentrations of HA-TIGIT, as indicated. Data are representative of two or more
independent experiments; n = 4. Data are normalized to the maximal signal. E
depicts quantification of the CD226:CD226 FRET ratio (FRET ratio 1). F depicts
quantification of the TIGIT:CD226 FRET ratio (FRET ratio 2). G depicts anti-FLAG
(left) and anti-HA (right) immunoblots performed on either anti-FLAG or anti-HA
immunoprecipitates prepared from COS-7 cells transfected with either an empty pRK vector
or a combination of Flag-CD226 and HA-TIGIT. Data are representative of two independent
experiments. H depicts quantification of the TIGIT:CD226 FRET ratio after
incubation with PBS (white) or anti-TIGIT antibodies (red). ***, P < 0.001. Data are
representative of 4 independent experiments; n = 3. Error bars depict the standard error of the
mean.
shows that primary human T cells were MACS-enriched from blood and
stimulated with anti-CD3 and anti-CD28. TIGIT and TIGIT cells were sorted, rested, re-
stimulated, and labeled for FRET with the antibodies indicated. Data are representative of
two independent experiments. ***, P < 0.001. Error bars depict the standard error of the
mean.
shows that TIGIT and PD-1 co-blockade does not restore the effector
function of exhausted CD4 T cells during chronic viral infection. A depicts
quantitation of CD8 T cells as a percentage of all splenocytes. B depicts quantitation
of GP33 Pentamer cells as a percentage of all splenic CD8 T cells. **, P = 0.0040. C depicts representative FACS plots gated on gp33 pentamer CD8 T cells after
stimulation in vitro, with IFNγ cells boxed. Quantitation of IFNγ-producing cells as a
percentage of all gp33 pentamer CD8 T cells. *, P = 0.0319. **, P = 0.0030. Error bars
depict the standard error of the mean.
shows that TIGIT/PD-L1 co-blockade efficacy is dependent on CD8 T
cells. In A-32B, wildtype BALB/c mice were inoculated with CT26 tumors as
described in When tumors reached 100-150 mm in size, mice were temporarily
depleted of CD8 T cells and treated with anti-TIGIT + anti-PD-L1. Data are representative
of one experiment; n = 10/group. A depicts median (left) and individual (right) CT26
tumor volumes over time. B depicts quantitation of CT26 tumor volumes 17 days
after the start of treatment. ***, P = 0.0004. In C, wildtype BALB/c mice were
inoculated with CT26 tumors and treated with anti-TIGIT + anti-PD-L1 and subsequently re-
challenged with CT26 tumors with temporary depletion of CD8 T cells at the time of re-
challenge. Data are representative of two independent experiments; n = 5. C depicts
median (left) and individual (right) CT26 tumor volumes over time. Error bars depict the
standard error of the mean.
shows that PVR expression on tumor cells is dispensable for TIGIT/PD-L1
co-blockade efficacy. Wildtype BALB/c mice were inoculated with wildtype or PVR-
deficient (PVR.KO) tumors as described. When tumors reached 150-200 mm in size, mice
were treated with anti-TIGIT + anti-PD-L1 or isotype-matched control antibodies. Data are
representative of one experiment; n = 10/group. depicts median (left) and individual
(right) CT26 tumor volumes over time.
shows the efficacy of TIGIT/PD-L1 antibody co-blockade in mice bearing
EMT6 tumors. EMT6 tumor-bearing mice were generated as above and treated with blocking
antibodies against PD-L1 (red), TIGIT (blue), TIGIT and PD-L1 (purple) or isotype-matched
control antibodies (black) for three weeks. N = 10 (control, anti-PD-L1 alone, anti-TIGIT
alone) or 20 (anti-TIGIT + anti-PD-L1). depicts median (left) and individual (right)
EMT6 tumor volumes over time.
shows that TIGIT regulates tumor-infiltrating CD8 T cell effector
function. BALB/C mice were subcutaneously inoculated with CT26 colorectal carcinoma
cells in their right thoracic flanks and treated with anti-PD-L1, anti-TIGIT, or anti-PD-L1 +
anti-TIGIT, as described in Tumor-draining lymph node (dLN) resident and tumor-
infiltrating T cells were analyzed by flow cytometry 7 days after the start of treatment. Data
are representative of two independent experiments; n = 5. A depicts quantitation of
IFNγ/TNFα dual-producing dLN resident CD8 and CD4 T cells as percentages of total dLN
resident CD8 and CD4 T cells respectively. Dual cytokine production by unstimulated T
cells is also shown. **, P = 0.002, 0.003, and 0.001 respectively. B depicts
quantitation of IFNγ/TNFα dual-producing tumor-infiltrating CD8 and CD4 T cells as
percentages of total tumor-infiltrating CD8 and CD4 T cells respectively. Dual cytokine
production by unstimulated T cells is also shown. ***, P < 0.0001. Error bars depict the
standard error of the mean.
shows analysis of lymphocytes from resected human NSCLC tumors,
tumor-matched peripheral blood, and normal donor peripheral blood. Data are pooled from
three independently acquired sets of samples. A depicts quantitation of TIGIT cells
as a percentage of all CD8 T cells. *, P < 0.05. B depicts quantitation of TIGIT
cells as a percentage of all CD4 T cells.
shows characterization of TIGIT expression in human tumors. A
depicts representative flow cytometry histograms of TIGIT expression by NSCLC tumor-
+ low + high
resident lymphocytes (red, CD45 FSC ), myeloid cells (blue, CD45 FSC ), and non-
hematopoietic cells (green, CD45 ) relative to subset-matched isotype staining (gray). FIG.
high low +
37B depicts gating strategy for PD-1 and PD-1 NSCLC tumor-infiltrating CD8 and
CD4 T cells.
DETAILED DESCRIPTION OF THE INVENTION
I. General techniques
The techniques and procedures described or referenced herein are generally well
understood and commonly employed using conventional methodology by those skilled in the
art, such as, for example, the widely utilized methodologies described in Sambrook et al.,
Molecular Cloning: A Laboratory Manual 3d edition (2001) Cold Spring Harbor Laboratory
Press, Cold Spring Harbor, N.Y.; Current Protocols in Molecular Biology (F.M. Ausubel, et
al. eds., (2003)); the series Methods in Enzymology (Academic Press, Inc.): PCR 2: A
Practical Approach (M.J. MacPherson, B.D. Hames and G.R. Taylor eds. (1995)), Harlow
and Lane, eds. (1988) Antibodies, A Laboratory Manual, and Animal Cell Culture (R.I.
Freshney, ed. (1987)); Oligonucleotide Synthesis (M.J. Gait, ed., 1984); Methods in
Molecular Biology, Humana Press; Cell Biology: A Laboratory Notebook (J.E. Cellis, ed.,
1998) Academic Press; Animal Cell Culture (R.I. Freshney), ed., 1987); Introduction to Cell
and Tissue Culture (J.P. Mather and P.E. Roberts, 1998) Plenum Press; Cell and Tissue
Culture: Laboratory Procedures (A. Doyle, J.B. Griffiths, and D.G. Newell, eds., 1993-8) J.
Wiley and Sons; Handbook of Experimental Immunology (D.M. Weir and C.C. Blackwell,
eds.); Gene Transfer Vectors for Mammalian Cells (J.M. Miller and M.P. Calos, eds., 1987);
PCR: The Polymerase Chain Reaction, (Mullis et al., eds., 1994); Current Protocols in
Immunology (J.E. Coligan et al., eds., 1991); Short Protocols in Molecular Biology (Wiley
and Sons, 1999); Immunobiology (C.A. Janeway and P. Travers, 1997); Antibodies (P. Finch,
1997); Antibodies: A Practical Approach (D. Catty., ed., IRL Press, 1988-1989); Monoclonal
Antibodies: A Practical Approach (P. Shepherd and C. Dean, eds., Oxford University Press,
2000); Using Antibodies: A Laboratory Manual (E. Harlow and D. Lane (Cold Spring Harbor
Laboratory Press, 1999); The Antibodies (M. Zanetti and J. D. Capra, eds., Harwood
Academic Publishers, 1995); and Cancer: Principles and Practice of Oncology (V.T. DeVita
et al., eds., J.B. Lippincott Company, 1993).
II. Definitions
[0149A] The term “comprising” as used in this specification and claims means “consisting at
least in part of”. When interpreting statements in this specification, and claims which include
the term “comprising”, it is to be understood that other features that are additional to the
features prefaced by this term in each statement or claim may also be present. Related terms
such as “comprise” and “comprised” are to be interpreted in similar manner.
The term “PD-1 axis binding antagonist" is a molecule that inhibits the interaction
of a PD-1 axis binding partner with either one or more of its binding partner, so as to remove
T-cell dysfunction resulting from signaling on the PD-1 signaling axis – with a result being to
restore or enhance T-cell function (e.g., proliferation, cytokine production, target cell killing).
As used herein, a PD-1 axis binding antagonist includes a PD-1 binding antagonist, a PD-L1
binding antagonist and a PD-L2 binding antagonist.
The term “PD-1 binding antagonists” is a molecule that decreases, blocks, inhibits,
abrogates or interferes with signal transduction resulting from the interaction of PD-1 with
one or more of its binding partners, such as PD-L1, PD-L2. In some embodiments, the PD-1
binding antagonist is a molecule that inhibits the binding of PD-1 to its binding partners. In a
specific embodiment, the PD-1 binding antagonist inhibits the binding of PD-1 to PD-L1
and/or PD-L2. For example, PD-1 binding antagonists include anti-PD-1 antibodies, antigen
binding fragments thereof, immunoadhesins, fusion proteins, oligopeptides and other
molecules that decrease, block, inhibit, abrogate or interfere with signal transduction resulting
from the interaction of PD-1 with PD-L1 and/or PD-L2. In one embodiment, a PD-1 binding
antagonist reduces the negative co-stimulatory signal mediated by or through cell surface
proteins expressed on T lymphocytes mediated signaling through PD-1 so as render a
dysfunctional T-cell less dysfunctional (e.g., enhancing effector responses to antigen
recognition). In some embodiments, the PD-1 binding antagonist is an anti-PD-1 antibody.
In a specific embodiment, a PD-1 binding antagonist is MDX-1106 described herein. In
another specific embodiment, a PD-1 binding antagonist is Merck 3745 described herein. In
another specific embodiment, a PD-1 binding antagonist is CT-011 described herein. In
another specific embodiment, a PD-1 binding antagonist is AMP-224 described herein.
The term “PD-L1 binding antagonists” is a molecule that decreases, blocks,
inhibits, abrogates or interferes with signal transduction resulting from the interaction of PD-
L1 with either one or more of its binding partners, such as PD-1, B7-1. In some
embodiments, a PD-L1 binding antagonist is a molecule that inhibits the binding of PD-L1 to
its binding partners. In a specific embodiment, the PD-L1 binding antagonist inhibits binding
of PD-L1 to PD-1 and/or B7-1. In some embodiments, the PD-L1 binding antagonists
include anti-PD-L1 antibodies, antigen binding fragments thereof, immunoadhesins, fusion
proteins, oligopeptides and other molecules that decrease, block, inhibit, abrogate or interfere
with signal transduction resulting from the interaction of PD-L1 with one or more of its
binding partners, such as PD-1, B7-1. In one embodiment, a PD-L1 binding antagonist
reduces the negative co-stimulatory signal mediated by or through cell surface proteins
expressed on T lymphocytes mediated signaling through PD-L1 so as to render a
dysfunctional T-cell less dysfunctional (e.g., enhancing effector responses to antigen
recognition). In some embodiments, a PD-L1 binding antagonist is an anti-PD-L1 antibody.
In a specific embodiment, an anti-PD-L1 antibody is YW243.55.S70 described herein. In
another specific embodiment, an anti-PD-L1 antibody is MDX-1105 described herein. In still
another specific embodiment, an anti-PD-L1 antibody is MPDL3280A described herein. In
another specific embodiment, an anti-PD-L1 antibody is MEDI 4736 described herein.
The term “PD-L2 binding antagonists” is a molecule that decreases, blocks,
inhibits, abrogates or interferes with signal transduction resulting from the interaction of PD-
L2 with either one or more of its binding partners, such as PD-1. In some embodiments, a
PD-L2 binding antagonist is a molecule that inhibits the binding of PD-L2 to its binding
partners. In a specific embodiment, the PD-L2 binding antagonist inhibits binding of PD-L2
to PD-1. In some embodiments, the PD-L2 antagonists include anti-PD-L2 antibodies,
antigen binding fragments thereof, immunoadhesins, fusion proteins, oligopeptides and other
molecules that decrease, block, inhibit, abrogate or interfere with signal transduction resulting
from the interaction of PD-L2 with either one or more of its binding partners, such as PD-1.
In one embodiment, a PD-L2 binding antagonist reduces the negative co-stimulatory signal
mediated by or through cell surface proteins expressed on T lymphocytes mediated signaling
through PD-L2 so as render a dysfunctional T-cell less dysfunctional (e.g., enhancing effector
responses to antigen recognition). In some embodiments, a PD-L2 binding antagonist is an
immunoadhesin.
The term “aptamer” refers to a nucleic acid molecule that is capable of binding to a
target molecule, such as a polypeptide. For example, an aptamer of the description can
specifically bind to a TIGIT polypeptide, or to a molecule in a signaling pathway that
modulates the expression of TIGIT. The generation and therapeutic use of aptamers are well
established in the art. See, e.g., U.S. Pat. No. 5,475,096, and the therapeutic efficacy of
Macugen® (Eyetech, New York) for treating age-related macular degeneration.
The term "antagonist" is used in the broadest sense, and includes any molecule that
partially or fully blocks, inhibits, or neutralizes a biological activity of a native polypeptide
disclosed herein. In a similar manner, the term "agonist" is used in the broadest sense and
includes any molecule that mimics a biological activity of a native polypeptide disclosed
herein. Suitable agonist or antagonist molecules specifically include agonist or antagonist
antibodies or antibody fragments, fragments or amino acid sequence variants of native
polypeptides, peptides, antisense oligonucleotides, small organic molecules, etc. Methods for
identifying agonists or antagonists of a polypeptide may comprise contacting a polypeptide
with a candidate agonist or antagonist molecule and measuring a detectable change in one or
more biological activities normally associated with the polypeptide.
The terms “TIGIT antagonist” and “antagonist of TIGIT activity or TIGIT
expression” are used interchangeably and refer to a compound that interferes with the normal
functioning of TIGIT, either by decreasing transcription or translation of TIGIT-encoding
nucleic acid, or by inhibiting or blocking TIGIT polypeptide activity, or both. Examples of
TIGIT antagonists include, but are not limited to, antisense polynucleotides, interfering
RNAs, catalytic RNAs, RNA-DNA chimeras, TIGIT-specific aptamers, anti-TIGIT
antibodies, TIGIT-binding fragments of anti-TIGIT antibodies, TIGIT-binding small
molecules, TIGIT-binding peptides, and other polypeptides that specifically bind TIGIT
(including, but not limited to, TIGIT-binding fragments of one or more TIGIT ligands,
optionally fused to one or more additional domains), such that the interaction between the
TIGIT antagonist and TIGIT results in a reduction or cessation of TIGIT activity or
expression. It will be understood by one of ordinary skill in the art that in some instances, a
TIGIT antagonist may antagonize one TIGIT activity without affecting another TIGIT
activity. For example, a desirable TIGIT antagonist for use in certain of the methods herein
is a TIGIT antagonist that antagonizes TIGIT activity in response to one of PVR interaction,
PVRL3 interaction, or PVRL2 interaction, e.g., without affecting or minimally affecting any
of the other TIGIT interactions.
The terms “PVR antagonist” and “antagonist of PVR activity or PVR expression”
are used interchangeably and refer to a compound that interferes with the normal functioning
of PVR, either by decreasing transcription or translation of PVR-encoding nucleic acid, or by
inhibiting or blocking PVR polypeptide activity, or both. Examples of PVR antagonists
include, but are not limited to, antisense polynucleotides, interfering RNAs, catalytic RNAs,
RNA-DNA chimeras, PVR-specific aptamers, anti-PVR antibodies, PVR-binding fragments
of anti-PVR antibodies, PVR-binding small molecules, PVR-binding peptides, and other
polypeptides that specifically bind PVR (including, but not limited to, PVR-binding
fragments of one or more PVR ligands, optionally fused to one or more additional domains),
such that the interaction between the PVR antagonist and PVR results in a reduction or
cessation of PVR activity or expression. It will be understood by one of ordinary skill in the
art that in some instances, a PVR antagonist may antagonize one PVR activity without
affecting another PVR activity. For example, a desirable PVR antagonist for use in certain of
the methods herein is a PVR antagonist that antagonizes PVR activity in response to TIGIT
interaction without impacting the PVR-CD96 and/or PVR-CD226 interactions.
The term “dysfunction” in the context of immune dysfunction, refers to a state of
reduced immune responsiveness to antigenic stimulation. The term includes the common
elements of both exhaustion and/or anergy in which antigen recognition may occur, but the
ensuing immune response is ineffective to control infection or tumor growth.
The term “dysfunctional”, as used herein, also includes refractory or unresponsive
to antigen recognition, specifically, impaired capacity to translate antigen recognition into
down-stream T-cell effector functions, such as proliferation, cytokine production (e.g., IL-2)
and/or target cell killing.
The term “anergy” refers to the state of unresponsiveness to antigen stimulation
resulting from incomplete or insufficient signals delivered through the T-cell receptor (e.g.
increase in intracellular Ca in the absence of ras-activation). T cell anergy can also result
upon stimulation with antigen in the absence of co-stimulation, resulting in the cell becoming
refractory to subsequent activation by the antigen even in the context of costimulation. The
unresponsive state can often be overridden by the presence of Interleukin-2. Anergic T-cells
do not undergo clonal expansion and/or acquire effector functions.
The term “exhaustion” refers to T cell exhaustion as a state of T cell dysfunction
that arises from sustained TCR signaling that occurs during many chronic infections and
cancer. It is distinguished from anergy in that it arises not through incomplete or deficient
signaling, but from sustained signaling. It is defined by poor effector function, sustained
expression of inhibitory receptors and a transcriptional state distinct from that of functional
effector or memory T cells. Exhaustion prevents optimal control of infection and tumors.
Exhaustion can result from both extrinsic negative regulatory pathways (e.g.,
immunoregulatory cytokines) as well as cell intrinsic negative regulatory (costimulatory)
pathways (PD-1, B7-H3, B7-H4, etc.).
“Enhancing T-cell function” means to induce, cause or stimulate a T-cell to have a
sustained or amplified biological function, or renew or reactivate exhausted or inactive T-
cells. Examples of enhancing T-cell function include: increased secretion of γ-interferon
from CD8 T-cells, increased proliferation, increased antigen responsiveness (e.g., viral,
pathogen, or tumor clearance) relative to such levels before the intervention. In one
embodiment, the level of enhancement is as least 50%, alternatively 60%, 70%, 80%, 90%,
100%, 120%, 150%, 200%. The manner of measuring this enhancement is known to one of
ordinary skill in the art.
A “T cell dysfunctional disorder” is a disorder or condition of T-cells characterized
by decreased responsiveness to antigenic stimulation. In a particular embodiment, a T-cell
dysfunctional disorder is a disorder that is specifically associated with inappropriate
increased signaling through PD-1. In another embodiment, a T-cell dysfunctional disorder is
one in which T-cells are anergic or have decreased ability to secrete cytokines, proliferate, or
execute cytolytic activity. In a specific embodiment, the decreased responsiveness results in
ineffective control of a pathogen or tumor expressing an immunogen. Examples of T cell
dysfunctional disorders characterized by T-cell dysfunction include unresolved acute
infection, chronic infection and tumor immunity.
“Tumor immunity” refers to the process in which tumors evade immune recognition
and clearance. Thus, as a therapeutic concept, tumor immunity is “treated” when such
evasion is attenuated, and the tumors are recognized and attacked by the immune system.
Examples of tumor recognition include tumor binding, tumor shrinkage and tumor clearance.
“Immunogenecity” refers to the ability of a particular substance to provoke an
immune response. Tumors are immunogenic and enhancing tumor immunogenicity aids in
the clearance of the tumor cells by the immune response. Examples of enhancing tumor
immunogenicity include but not limited to treatment with a PD-1 axis binding antagonist
(e.g., anti-PD-L1 antibodies and a TIGIT inhibitor (e.g., anti-TIGIT antibodies).
“Sustained response” refers to the sustained effect on reducing tumor growth after
cessation of a treatment. For example, the tumor size may remain to be the same or smaller
as compared to the size at the beginning of the administration phase. In some embodiments,
the sustained response has a duration at least the same as the treatment duration, at least 1.5X,
2.0X, 2.5X, or 3.0X length of the treatment duration.
The term “antibody” includes monoclonal antibodies (including full length
antibodies which have an immunoglobulin Fc region), antibody compositions with
polyepitopic specificity, multispecific antibodies (e.g., bispecific antibodies, diabodies, and
single-chain molecules, as well as antibody fragments (e.g., Fab, F(ab') , and Fv). The term
“immunoglobulin” (Ig) is used interchangeably with “antibody” herein.
The basic 4-chain antibody unit is a heterotetrameric glycoprotein composed of two
identical light (L) chains and two identical heavy (H) chains. An IgM antibody consists of 5
of the basic heterotetramer units along with an additional polypeptide called a J chain, and
contains 10 antigen binding sites, while IgA antibodies comprise from 2-5 of the basic 4-
chain units which can polymerize to form polyvalent assemblages in combination with the J
chain. In the case of IgGs, the 4-chain unit is generally about 150,000 daltons. Each L chain
is linked to an H chain by one covalent disulfide bond, while the two H chains are linked to
each other by one or more disulfide bonds depending on the H chain isotype. Each H and L
chain also has regularly spaced intrachain disulfide bridges. Each H chain has at the N-
terminus, a variable domain (V ) followed by three constant domains (C ) for each of the α
and γ chains and four C domains for μ and ε isotypes. Each L chain has at the N-terminus, a
variable domain (V ) followed by a constant domain at its other end. The V is aligned with
the V and the C is aligned with the first constant domain of the heavy chain (C 1).
H L H
Particular amino acid residues are believed to form an interface between the light chain and
heavy chain variable domains. The pairing of a V and V together forms a single antigen-
binding site. For the structure and properties of the different classes of antibodies, see e.g.,
Basic and Clinical Immunology, 8th Edition, Daniel P. Sties, Abba I. Terr and Tristram G.
Parsolw (eds), Appleton & Lange, Norwalk, CT, 1994, page 71 and Chapter 6. The L chain
from any vertebrate species can be assigned to one of two clearly distinct types, called kappa
and lambda, based on the amino acid sequences of their constant domains. Depending on the
amino acid sequence of the constant domain of their heavy chains (CH), immunoglobulins
can be assigned to different classes or isotypes. There are five classes of immunoglobulins:
IgA, IgD, IgE, IgG and IgM, having heavy chains designated α, δ, ε, γ and μ, respectively.
The γ and α classes are further divided into subclasses on the basis of relatively minor
differences in the CH sequence and function, e.g., humans express the following subclasses:
IgG1, IgG2A, IgG2B, IgG3, IgG4, IgA1 and IgA2.
The “variable region” or “variable domain” of an antibody refers to the amino-
terminal domains of the heavy or light chain of the antibody. The variable domains of the
heavy chain and light chain may be referred to as “VH” and “VL”, respectively. These
domains are generally the most variable parts of the antibody (relative to other antibodies of
the same class) and contain the antigen binding sites.
The term "variable" refers to the fact that certain segments of the variable domains
differ extensively in sequence among antibodies. The V domain mediates antigen binding
and defines the specificity of a particular antibody for its particular antigen. However, the
variability is not evenly distributed across the entire span of the variable domains. Instead, it
is concentrated in three segments called hypervariable regions (HVRs) both in the light-chain
and the heavy chain variable domains. The more highly conserved portions of variable
domains are called the framework regions (FR). The variable domains of native heavy and
light chains each comprise four FR regions, largely adopting a beta-sheet configuration,
connected by three HVRs, which form loops connecting, and in some cases forming part of,
the beta-sheet structure. The HVRs in each chain are held together in close proximity by the
FR regions and, with the HVRs from the other chain, contribute to the formation of the
antigen binding site of antibodies (see Kabat et al., Sequences of Immunological Interest,
Fifth Edition, National Institute of Health, Bethesda, MD (1991)). The constant domains are
not involved directly in the binding of antibody to an antigen, but exhibit various effector
functions, such as participation of the antibody in antibody-dependent cellular toxicity.
The term “monoclonal antibody” as used herein refers to an antibody obtained from
a population of substantially homogeneous antibodies, i.e., the individual antibodies
comprising the population are identical except for possible naturally occurring mutations
and/or post-translation modifications (e.g., isomerizations, amidations) that may be present in
minor amounts. Monoclonal antibodies are highly specific, being directed against a single
antigenic site. In contrast to polyclonal antibody preparations which typically include
different antibodies directed against different determinants (epitopes), each monoclonal
antibody is directed against a single determinant on the antigen. In addition to their
specificity, the monoclonal antibodies are advantageous in that they are synthesized by the
hybridoma culture, uncontaminated by other immunoglobulins. The modifier "monoclonal"
indicates the character of the antibody as being obtained from a substantially homogeneous
population of antibodies, and is not to be construed as requiring production of the antibody by
any particular method. For example, the monoclonal antibodies to be used in accordance
with the present description may be made by a variety of techniques, including, for example,
the hybridoma method (e.g., Kohler and Milstein., Nature, 256:495-97 (1975); Hongo et al.,
Hybridoma, 14 (3): 253-260 (1995), Harlow et al., Antibodies: A Laboratory Manual, (Cold
Spring Harbor Laboratory Press, 2 ed. 1988); Hammerling et al., in: Monoclonal Antibodies
and T-Cell Hybridomas 563-681 (Elsevier, N.Y., 1981)), recombinant DNA methods (see,
e.g., U.S. Patent No. 4,816,567), phage-display technologies (see, e.g., Clackson et al.,
Nature, 352: 624-628 (1991); Marks et al., J. Mol. Biol. 222: 581-597 (1992); Sidhu et al., J.
Mol. Biol. 338(2): 299-310 (2004); Lee et al., J. Mol. Biol. 340(5): 1073-1093 (2004);
Fellouse, Proc. Natl. Acad. Sci. USA 101(34): 12467-12472 (2004); and Lee et al., J.
Immunol. Methods 284(1-2): 119-132 (2004), and technologies for producing human or
human-like antibodies in animals that have parts or all of the human immunoglobulin loci or
genes encoding human immunoglobulin sequences (see, e.g., ; WO
1996/34096; ; ; Jakobovits et al., Proc. Natl. Acad. Sci. USA
90: 2551 (1993); Jakobovits et al., Nature 362: 255-258 (1993); Bruggemann et al., Year in
Immunol. 7:33 (1993); U.S. Patent Nos. 5,545,807; 5,545,806; 5,569,825; 5,625,126;
,633,425; and 5,661,016; Marks et al., Bio/Technology 10: 779-783 (1992); Lonberg et al.,
Nature 368: 856-859 (1994); Morrison, Nature 368: 812-813 (1994); Fishwild et al., Nature
Biotechnol. 14: 845-851 (1996); Neuberger, Nature Biotechnol. 14: 826 (1996); and Lonberg
and Huszar, Intern. Rev. Immunol. 13: 65-93 (1995).
The term “naked antibody” refers to an antibody that is not conjugated to a
cytotoxic moiety or radiolabel.
The terms “full-length antibody,” “intact antibody” or “whole antibody” are used
interchangeably to refer to an antibody in its substantially intact form, as opposed to an
antibody fragment. Specifically whole antibodies include those with heavy and light chains
including an Fc region. The constant domains may be native sequence constant domains
(e.g., human native sequence constant domains) or amino acid sequence variants thereof. In
some cases, the intact antibody may have one or more effector functions.
An “antibody fragment” comprises a portion of an intact antibody, preferably the
antigen binding and/or the variable region of the intact antibody. Examples of antibody
fragments include Fab, Fab', F(ab') and Fv fragments; diabodies; linear antibodies (see U.S.
Patent 5,641,870, Example 2; Zapata et al., Protein Eng. 8(10): 1057-1062 [1995]); single-
chain antibody molecules and multispecific antibodies formed from antibody fragments.
Papain digestion of antibodies produced two identical antigen-binding fragments, called
"Fab" fragments, and a residual "Fc" fragment, a designation reflecting the ability to
crystallize readily. The Fab fragment consists of an entire L chain along with the variable
region domain of the H chain (V ), and the first constant domain of one heavy chain (C 1).
Each Fab fragment is monovalent with respect to antigen binding, i.e., it has a single antigen-
binding site. Pepsin treatment of an antibody yields a single large F(ab') fragment which
roughly corresponds to two disulfide linked Fab fragments having different antigen-binding
activity and is still capable of cross-linking antigen. Fab' fragments differ from Fab
fragments by having a few additional residues at the carboxy terminus of the C 1 domain
including one or more cysteines from the antibody hinge region. Fab'-SH is the designation
herein for Fab' in which the cysteine residue(s) of the constant domains bear a free thiol
group. F(ab') antibody fragments originally were produced as pairs of Fab' fragments which
have hinge cysteines between them. Other chemical couplings of antibody fragments are also
known.
The Fc fragment comprises the carboxy-terminal portions of both H chains held
together by disulfides. The effector functions of antibodies are determined by sequences in
the Fc region, the region which is also recognized by Fc receptors (FcR) found on certain
types of cells.
“Fv” is the minimum antibody fragment which contains a complete antigen-
recognition and -binding site. This fragment consists of a dimer of one heavy- and one light-
chain variable region domain in tight, non-covalent association. From the folding of these
two domains emanate six hypervariable loops (3 loops each from the H and L chain) that
contribute the amino acid residues for antigen binding and confer antigen binding specificity
to the antibody. However, even a single variable domain (or half of an Fv comprising only
three HVRs specific for an antigen) has the ability to recognize and bind antigen, although at
a lower affinity than the entire binding site.
“Single-chain Fv” also abbreviated as “sFv” or “scFv” are antibody fragments that
comprise the V and V antibody domains connected into a single polypeptide chain.
Preferably, the sFv polypeptide further comprises a polypeptide linker between the V and V
domains which enables the sFv to form the desired structure for antigen binding. For a
review of the sFv, see Pluckthun in The Pharmacology of Monoclonal Antibodies, vol. 113,
Rosenburg and Moore eds., Springer-Verlag, New York, pp. 269-315 (1994).
“Functional fragments” of the antibodies of the description comprise a portion of an
intact antibody, generally including the antigen binding or variable region of the intact
antibody or the Fc region of an antibody which retains or has modified FcR binding
capability. Examples of antibody fragments include linear antibody, single-chain antibody
molecules and multispecific antibodies formed from antibody fragments.
The term “diabodies” refers to small antibody fragments prepared by constructing
sFv fragments (see preceding paragraph) with short linkers (about 5-10) residues) between
the V and V domains such that inter-chain but not intra-chain pairing of the V domains is
achieved, thereby resulting in a bivalent fragment, i.e., a fragment having two antigen-
binding sites. Bispecific diabodies are heterodimers of two "crossover" sFv fragments in
which the V and V domains of the two antibodies are present on different polypeptide
chains. Diabodies are described in greater detail in, for example, EP 404,097; WO 93/11161;
Hollinger et al., Proc. Natl. Acad. Sci. USA 90: 6444-6448 (1993).
The monoclonal antibodies herein specifically include "chimeric" antibodies
(immunoglobulins) in which a portion of the heavy and/or light chain is identical with or
homologous to corresponding sequences in antibodies derived from a particular species or
belonging to a particular antibody class or subclass, while the remainder of the chain(s)
is(are) identical with or homologous to corresponding sequences in antibodies derived from
another species or belonging to another antibody class or subclass, as well as fragments of
such antibodies, so long as they exhibit the desired biological activity (U.S. Patent No.
4,816,567; Morrison et al., Proc. Natl. Acad. Sci. USA, 81:6851-6855 (1984)). Chimeric
antibodies of interest herein include PRIMATIZED antibodies wherein the antigen-binding
region of the antibody is derived from an antibody produced by, e.g., immunizing macaque
monkeys with an antigen of interest. As used herein, “humanized antibody” is used a subset
of “chimeric antibodies.”
"Humanized" forms of non-human (e.g., murine) antibodies are chimeric antibodies
that contain minimal sequence derived from non-human immunoglobulin. In one
embodiment, a humanized antibody is a human immunoglobulin (recipient antibody) in
which residues from an HVR (hereinafter defined) of the recipient are replaced by residues
from an HVR of a non-human species (donor antibody) such as mouse, rat, rabbit or non-
human primate having the desired specificity, affinity, and/or capacity. In some instances,
framework (“FR”) residues of the human immunoglobulin are replaced by corresponding
non-human residues. Furthermore, humanized antibodies may comprise residues that are not
found in the recipient antibody or in the donor antibody. These modifications may be made
to further refine antibody performance, such as binding affinity. In general, a humanized
antibody will comprise substantially all of at least one, and typically two, variable domains,
in which all or substantially all of the hypervariable loops correspond to those of a non-
human immunoglobulin sequence, and all or substantially all of the FR regions are those of a
human immunoglobulin sequence, although the FR regions may include one or more
individual FR residue substitutions that improve antibody performance, such as binding
affinity, isomerization, immunogenicity, etc. The number of these amino acid substitutions in
the FR are typically no more than 6 in the H chain, and in the L chain, no more than 3. The
humanized antibody optionally will also comprise at least a portion of an immunoglobulin
constant region (Fc), typically that of a human immunoglobulin. For further details, see, e.g.,
Jones et al., Nature 321:522-525 (1986); Riechmann et al., Nature 332:323-329 (1988); and
Presta, Curr. Op. Struct. Biol. 2:593-596 (1992). See also, for example, Vaswani and
Hamilton, Ann. Allergy, Asthma & Immunol. 1:105-115 (1998); Harris, Biochem. Soc.
Transactions 23:1035-1038 (1995); Hurle and Gross, Curr. Op. Biotech. 5:428-433 (1994);
and U.S. Pat. Nos. 6,982,321 and 7,087,409.
A “human antibody” is an antibody that possesses an amino-acid sequence
corresponding to that of an antibody produced by a human and/or has been made using any of
the techniques for making human antibodies as disclosed herein. This definition of a human
antibody specifically excludes a humanized antibody comprising non-human antigen-binding
residues. Human antibodies can be produced using various techniques known in the art,
including phage-display libraries. Hoogenboom and Winter, J. Mol. Biol., 227:381 (1991);
Marks et al., J. Mol. Biol., 222:581 (1991). Also available for the preparation of human
monoclonal antibodies are methods described in Cole et al., Monoclonal Antibodies and
Cancer Therapy, Alan R. Liss, p. 77 (1985); Boerner et al., J. Immunol., 147(1):86-95
(1991). See also van Dijk and van de Winkel, Curr. Opin. Pharmacol., 5: 368-74 (2001).
Human antibodies can be prepared by administering the antigen to a transgenic animal that
has been modified to produce such antibodies in response to antigenic challenge, but whose
endogenous loci have been disabled, e.g., immunized xenomice (see, e.g., U.S. Pat. Nos.
6,075,181 and 6,150,584 regarding XENOMOUSE technology). See also, for example, Li
et al., Proc. Natl. Acad. Sci. USA, 103:3557-3562 (2006) regarding human antibodies
generated via a human B-cell hybridoma technology.
The term “hypervariable region,” “HVR,” or “HV,” when used herein refers to the
regions of an antibody variable domain which are hypervariable in sequence and/or form
structurally defined loops. Generally, antibodies comprise six HVRs; three in the VH (H1,
H2, H3), and three in the VL (L1, L2, L3). In native antibodies, H3 and L3 display the most
diversity of the six HVRs, and H3 in particular is believed to play a unique role in conferring
fine specificity to antibodies. See, e.g., Xu et al., Immunity 13:37-45 (2000); Johnson and
Wu, in Methods in Molecular Biology 248:1-25 (Lo, ed., Human Press, Totowa, NJ, 2003).
Indeed, naturally occurring camelid antibodies consisting of a heavy chain only are functional
and stable in the absence of light chain. See, e.g., Hamers-Casterman et al., Nature 363:446-
448 (1993); Sheriff et al., Nature Struct. Biol. 3:733-736 (1996).
A number of HVR delineations are in use and are encompassed herein. The Kabat
Complementarity Determining Regions (CDRs) are based on sequence variability and are the
most commonly used (Kabat et al., Sequences of Proteins of Immunological Interest, 5th Ed.
Public Health Service, National Institutes of Health, Bethesda, MD. (1991)). Chothia refers
instead to the location of the structural loops (Chothia and Lesk, J. Mol. Biol. 196:901-917
(1987)). The AbM HVRs represent a compromise between the Kabat HVRs and Chothia
structural loops, and are used by Oxford Molecular's AbM antibody modeling software. The
“contact” HVRs are based on an analysis of the available complex crystal structures. The
residues from each of these HVRs are noted below.
Loop Kabat AbM Chothia Contact
L1 L24-L34 L24-L34 L26-L32 L30-L36
L2 L50-L56 L50-L56 L50-L52 L46-L55
L3 L89-L97 L89-L97 L91-L96 L89-L96
H1 H31-H35B H26-H35B H26-H32 H30-H35B (Kabat numbering)
H1 H31-H35 H26-H35 H26-H32 H30-H35 (Chothia numbering)
H2 H50-H65 H50-H58 H53-H55 H47-H58
H3 H95-H102 H95-H102 H96-H101 H93-H101
HVRs may comprise “extended HVRs” as follows: 24-36 or 24-34 (L1), 46-56 or
50-56 (L2) and 89-97 or 89-96 (L3) in the VL and 26-35 (H1), 50-65 or 49-65 (H2) and 93-
102, 94-102, or 95-102 (H3) in the VH. The variable domain residues are numbered
according to Kabat et al., supra, for each of these definitions.
The expression “variable-domain residue-numbering as in Kabat” or “amino-acid-
position numbering as in Kabat,” and variations thereof, refers to the numbering system used
for heavy-chain variable domains or light-chain variable domains of the compilation of
antibodies in Kabat et al., supra. Using this numbering system, the actual linear amino acid
sequence may contain fewer or additional amino acids corresponding to a shortening of, or
insertion into, a FR or HVR of the variable domain. For example, a heavy-chain variable
domain may include a single amino acid insert (residue 52a according to Kabat) after residue
52 of H2 and inserted residues (e.g. residues 82a, 82b, and 82c, etc. according to Kabat) after
heavy-chain FR residue 82. The Kabat numbering of residues may be determined for a given
antibody by alignment at regions of homology of the sequence of the antibody with a
“standard” Kabat numbered sequence.
"Framework" or "FR" residues are those variable-domain residues other than the
HVR residues as herein defined.
A “human consensus framework” or “acceptor human framework” is a framework
that represents the most commonly occurring amino acid residues in a selection of human
immunoglobulin VL or VH framework sequences. Generally, the selection of human
immunoglobulin VL or VH sequences is from a subgroup of variable domain sequences.
Generally, the subgroup of sequences is a subgroup as in Kabat et al., Sequences of Proteins
of Immunological Interest, 5 Ed. Public Health Service, National Institutes of Health,
Bethesda, MD (1991). Examples include for the VL, the subgroup may be subgroup kappa I,
kappa II, kappa III or kappa IV as in Kabat et al., supra. Additionally, for the VH, the
subgroup may be subgroup I, subgroup II, or subgroup III as in Kabat et al., supra.
Alternatively, a human consensus framework can be derived from the above in which
particular residues, such as when a human framework residue is selected based on its
homology to the donor framework by aligning the donor framework sequence with a
collection of various human framework sequences. An acceptor human framework “derived
from” a human immunoglobulin framework or a human consensus framework may comprise
the same amino acid sequence thereof, or it may contain pre-existing amino acid sequence
changes. In some embodiments, the number of pre-existing amino acid changes are 10 or
less, 9 or less, 8 or less, 7 or less, 6 or less, 5 or less, 4 or less, 3 or less, or 2 or less.
A “VH subgroup III consensus framework” comprises the consensus sequence
obtained from the amino acid sequences in variable heavy subgroup III of Kabat et al., supra.
In one embodiment, the VH subgroup III consensus framework amino acid sequence
comprises at least a portion or all of each of the following sequences:
EVQLVESGGGLVQPGGSLRLSCAAS (HC-FR1)(SEQ ID NO:25), WVRQAPGKGLEWV
(HC-FR2), (SEQ ID NO:26), RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (HC-FR3,
SEQ ID NO:27), WGQGTLVTVSA (HC-FR4), (SEQ ID NO:28).
A “VL kappa I consensus framework” comprises the consensus sequence obtained
from the amino acid sequences in variable light kappa subgroup I of Kabat et al., supra. In
one embodiment, the VH subgroup I consensus framework amino acid sequence comprises at
least a portion or all of each of the following sequences: DIQMTQSPSSLSASVGDRVTITC
(LC-FR1) (SEQ ID NO:29), WYQQKPGKAPKLLIY (LC-FR2) (SEQ ID NO:30),
GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (LC-FR3)(SEQ ID NO:31),
FGQGTKVEIKR (LC-FR4)(SEQ ID NO:32).
An “amino-acid modification” at a specified position, e.g. of the Fc region, refers to
the substitution or deletion of the specified residue, or the insertion of at least one amino acid
residue adjacent the specified residue. Insertion “adjacent” to a specified residue means
insertion within one to two residues thereof. The insertion may be N-terminal or C-terminal
to the specified residue. The preferred amino acid modification herein is a substitution.
An “affinity-matured” antibody is one with one or more alterations in one or more
HVRs thereof that result in an improvement in the affinity of the antibody for antigen,
compared to a parent antibody that does not possess those alteration(s). In one embodiment,
an affinity-matured antibody has nanomolar or even picomolar affinities for the target
antigen. Affinity-matured antibodies are produced by procedures known in the art. For
example, Marks et al., Bio/Technology 10:779-783 (1992) describes affinity maturation by
VH- and VL-domain shuffling. Random mutagenesis of HVR and/or framework residues is
described by, for example: Barbas et al. Proc Nat. Acad. Sci. USA 91:3809-3813 (1994);
Schier et al. Gene 169:147-155 (1995); Yelton et al. J. Immunol. 155:1994-2004 (1995);
Jackson et al., J. Immunol. 154(7):3310-9 (1995); and Hawkins et al, J. Mol. Biol. 226:889-
896 (1992).
As use herein, the term "specifically binds to" or is "specific for" refers to
measurable and reproducible interactions such as binding between a target and an antibody,
which is determinative of the presence of the target in the presence of a heterogeneous
population of molecules including biological molecules. For example, an antibody that
specifically binds to a target (which can be an epitope) is an antibody that binds this target
with greater affinity, avidity, more readily, and/or with greater duration than it binds to other
targets. In one embodiment, the extent of binding of an antibody to an unrelated target is less
than about 10% of the binding of the antibody to the target as measured, e.g., by a
radioimmunoassay (RIA). In certain embodiments, an antibody that specifically binds to a
target has a dissociation constant (Kd) of ≤ 1 μM, ≤ 100 nM, ≤ 10 nM, ≤ 1 nM, or ≤ 0.1 nM.
In certain embodiments, an antibody specifically binds to an epitope on a protein that is
conserved among the protein from different species. In another embodiment, specific binding
can include, but does not require exclusive binding.
As used herein, the term “immunoadhesin” designates antibody-like molecules
which combine the binding specificity of a heterologous protein (an “adhesin”) with the
effector functions of immunoglobulin constant domains. Structurally, the immunoadhesins
comprise a fusion of an amino acid sequence with the desired binding specificity which is
other than the antigen recognition and binding site of an antibody (i.e., is “heterologous”),
and an immunoglobulin constant domain sequence. The adhesin part of an immunoadhesin
molecule typically is a contiguous amino acid sequence comprising at least the binding site of
a receptor or a ligand. The immunoglobulin constant domain sequence in the immunoadhesin
may be obtained from any immunoglobulin, such as IgG-1, IgG-2 (including IgG2A and
IgG2B), IgG-3, or IgG-4 subtypes, IgA (including IgA-1 and IgA-2), IgE, IgD or IgM. The
Ig fusions preferably include the substitution of a domain of a polypeptide or antibody
described herein in the place of at least one variable region within an Ig molecule. In a
particularly preferred embodiment, the immunoglobulin fusion includes the hinge, CH2 and
CH3, or the hinge, CH1, CH2 and CH3 regions of an IgG1 molecule. For the production of
immunoglobulin fusions see also US Patent No. 5,428,130 issued June 27, 1995. For
example, useful immunoadhesins as second medicaments useful for combination therapy
herein include polypeptides that comprise the extracellular or PD-1 binding portions of PD-
L1 or PD-L2 or the extracellular or PD-L1 or PD-L2 binding portions of PD-1, fused to a
constant domain of an immunoglobulin sequence, such as a PD-L1 ECD – Fc, a PD-L2 ECD
– Fc, and a PD-1 ECD - Fc, respectively. Immunoadhesin combinations of Ig Fc and ECD of
cell surface receptors are sometimes termed soluble receptors.
A “fusion protein” and a “fusion polypeptide” refer to a polypeptide having two
portions covalently linked together, where each of the portions is a polypeptide having a
different property. The property may be a biological property, such as activity in vitro or in
vivo. The property may also be simple chemical or physical property, such as binding to a
target molecule, catalysis of a reaction, etc. The two portions may be linked directly by a
single peptide bond or through a peptide linker but are in reading frame with each other.
A “PD-1 oligopeptide,” “PD-L1 oligopeptide,” or “PD-L2 oligopeptide” is an
oligopeptide that binds, preferably specifically, to a PD-1, PD-L1 or PD-L2 negative
costimulatory polypeptide, respectively, including a receptor, ligand or signaling component,
respectively, as described herein. Such oligopeptides may be chemically synthesized using
known oligopeptide synthesis methodology or may be prepared and purified using
recombinant technology. Such oligopeptides are usually at least about 5 amino acids in
length, alternatively at least about 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22,
23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47,
48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72,
73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97,
98, 99, or 100 amino acids in length or more. Such oligopeptides may be identified using
well known techniques. In this regard, it is noted that techniques for screening oligopeptide
libraries for oligopeptides that are capable of specifically binding to a polypeptide target are
well known in the art (see, e.g., U.S. Patent Nos. 5,556,762, 5,750,373, 4,708,871, 4,833,092,
,223,409, 5,403,484, 5,571,689, 5,663,143; PCT Publication Nos. WO 84/03506 and
WO84/03564; Geysen et al., Proc. Natl. Acad. Sci. U.S.A., 81:3998-4002 (1984); Geysen et
al., Proc. Natl. Acad. Sci. U.S.A., 82:178-182 (1985); Geysen et al., in Synthetic Peptides as
Antigens, 130-149 (1986); Geysen et al., J. Immunol. Meth., 102:259-274 (1987); Schoofs et
al., J. Immunol., 140:611-616 (1988), Cwirla, S. E. et al. Proc. Natl. Acad. Sci. USA, 87:6378
(1990); Lowman, H.B. et al. Biochemistry, 30:10832 (1991); Clackson, T. et al. Nature, 352:
624 (1991); Marks, J. D. et al., J. Mol. Biol., 222:581 (1991); Kang, A.S. et al. Proc. Natl.
Acad. Sci. USA, 88:8363 (1991), and Smith, G. P., Current Opin. Biotechnol., 2:668 (1991).
A “blocking” antibody or an “antagonist” antibody is one that inhibits or reduces a
biological activity of the antigen it binds. In some embodiments, blocking antibodies or
antagonist antibodies substantially or completely inhibit the biological activity of the antigen.
The anti-PD-L1 antibodies of the description block the signaling through PD-1 so as to
restore a functional response by T-cells (e.g., proliferation, cytokine production, target cell
killing) from a dysfunctional state to antigen stimulation.
An “agonist” or activating antibody is one that enhances or initiates signaling by the
antigen to which it binds. In some embodiments, agonist antibodies cause or activate
signaling without the presence of the natural ligand.
The term “Fc region” herein is used to define a C-terminal region of an
immunoglobulin heavy chain, including native-sequence Fc regions and variant Fc regions.
Although the boundaries of the Fc region of an immunoglobulin heavy chain might vary, the
human IgG heavy-chain Fc region is usually defined to stretch from an amino acid residue at
position Cys226, or from Pro230, to the carboxyl-terminus thereof. The C-terminal lysine
(residue 447 according to the EU numbering system) of the Fc region may be removed, for
example, during production or purification of the antibody, or by recombinantly engineering
the nucleic acid encoding a heavy chain of the antibody. Accordingly, a composition of
intact antibodies may comprise antibody populations with all K447 residues removed,
antibody populations with no K447 residues removed, and antibody populations having a
mixture of antibodies with and without the K447 residue. Suitable native-sequence Fc
regions for use in the antibodies of the description include human IgG1, IgG2 (IgG2A,
IgG2B), IgG3 and IgG4.
“Fc receptor” or “FcR” describes a receptor that binds to the Fc region of an
antibody. The preferred FcR is a native sequence human FcR. Moreover, a preferred FcR is
one which binds an IgG antibody (a gamma receptor) and includes receptors of the FcγRI,
FcγRII, and FcγRIII subclasses, including allelic variants and alternatively spliced forms of
these receptors, FcγRII receptors include FcγRIIA (an "activating receptor") and FcγRIIB (an
"inhibiting receptor"), which have similar amino acid sequences that differ primarily in the
cytoplasmic domains thereof. Activating receptor FcγRIIA contains an immunoreceptor
tyrosine-based activation motif (ITAM) in its cytoplasmic domain. Inhibiting receptor
FcγRIIB contains an immunoreceptor tyrosine-based inhibition motif (ITIM) in its
cytoplasmic domain. (see M. Daëron, Annu. Rev. Immunol. 15:203-234 (1997). FcRs are
reviewed in Ravetch and Kinet, Annu. Rev. Immunol. 9: 457-92 (1991); Capel et al.,
Immunomethods 4: 25-34 (1994); and de Haas et al., J. Lab. Clin. Med. 126: 330-41 (1995).
Other FcRs, including those to be identified in the future, are encompassed by the term "FcR"
herein.
The term “Fc receptor” or “FcR” also includes the neonatal receptor, FcRn, which
is responsible for the transfer of maternal IgGs to the fetus. Guyer et al., J. Immunol. 117:
587 (1976) and Kim et al., J. Immunol. 24: 249 (1994). Methods of measuring binding to
FcRn are known (see, e.g., Ghetie and Ward, Immunol. Today 18: (12): 592-8 (1997); Ghetie
et al., Nature Biotechnology 15 (7): 637-40 (1997); Hinton et al., J. Biol. Chem. 279 (8):
6213-6 (2004); (Hinton et al.). Binding to FcRn in vivo and serum half-life
of human FcRn high-affinity binding polypeptides can be assayed, e.g., in transgenic mice or
transfected human cell lines expressing human FcRn, or in primates to which the
polypeptides having a variant Fc region are administered. (Presta) describes
antibody variants which improved or diminished binding to FcRs. See also, e.g., Shields et
al., J. Biol. Chem. 9(2): 6591-6604 (2001).
The phrase “substantially reduced,” or “substantially different,” as used herein,
denotes a sufficiently high degree of difference between two numeric values (generally one
associated with a molecule and the other associated with a reference/comparator molecule)
such that one of skill in the art would consider the difference between the two values to be of
statistical significance within the context of the biological characteristic measured by said
values (e.g., Kd values). The difference between said two values is, for example, greater than
about 10%, greater than about 20%, greater than about 30%, greater than about 40%, and/or
greater than about 50% as a function of the value for the reference/comparator molecule.
The term “substantially similar” or “substantially the same,” as used herein, denotes
a sufficiently high degree of similarity between two numeric values (for example, one
associated with an antibody of the description and the other associated with a
reference/comparator antibody), such that one of skill in the art would consider the difference
between the two values to be of little or no biological and/or statistical significance within the
context of the biological characteristic measured by said values (e.g., Kd values). The
difference between said two values is, for example, less than about 50%, less than about 40%,
less than about 30%, less than about 20%, and/or less than about 10% as a function of the
reference/comparator value.
"Carriers" as used herein include pharmaceutically acceptable carriers, excipients,
or stabilizers that are nontoxic to the cell or mammal being exposed thereto at the dosages
and concentrations employed. Often the physiologically acceptable carrier is an aqueous pH
buffered solution. Examples of physiologically acceptable carriers include buffers such as
phosphate, citrate, and other organic acids; antioxidants including ascorbic acid; low
molecular weight (less than about 10 residues) polypeptide; proteins, such as serum albumin,
gelatin, or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino
acids such as glycine, glutamine, asparagine, arginine or lysine; monosaccharides,
disaccharides, and other carbohydrates including glucose, mannose, or dextrins; chelating
agents such as EDTA; sugar alcohols such as mannitol or sorbitol; salt-forming counterions
such as sodium; and/or nonionic surfactants such as TWEEN™, polyethylene glycol (PEG),
and PLURONICS™.
A “package insert” refers to instructions customarily included in commercial
packages of medicaments that contain information about the indications customarily included
in commercial packages of medicaments that contain information about the indications,
usage, dosage, administration, contraindications, other medicaments to be combined with the
packaged product, and/or warnings concerning the use of such medicaments, etc.
As used herein, the term “treatment” refers to clinical intervention designed to alter
the natural course of the individual or cell being treated during the course of clinical
pathology. Desirable effects of treatment include decreasing the rate of disease progression,
ameliorating or palliating the disease state, and remission or improved prognosis. For
example, an individual is successfully “treated” if one or more symptoms associated with
cancer are mitigated or eliminated, including, but are not limited to, reducing the proliferation
of (or destroying) cancerous cells, decreasing symptoms resulting from the disease,
increasing the quality of life of those suffering from the disease, decreasing the dose of other
medications required to treat the disease, delaying the progression of the disease, and/or
prolonging survival of individuals.
As used herein, “delaying progression of a disease” means to defer, hinder, slow,
retard, stabilize, and/or postpone development of the disease (such as cancer). This delay can
be of varying lengths of time, depending on the history of the disease and/or individual being
treated. As is evident to one skilled in the art, a sufficient or significant delay can, in effect,
encompass prevention, in that the individual does not develop the disease. For example, a
late stage cancer, such as development of metastasis, may be delayed.
As used herein, “reducing or inhibiting cancer relapse” means to reduce or inhibit
tumor or cancer relapse or tumor or cancer progression.
As used herein, “cancer” and “cancerous” refer to or describe the physiological
condition in mammals that is typically characterized by unregulated cell growth. Included in
this definition are benign and malignant cancers as well as dormant tumors or
micrometastatses. Examples of cancer include but are not limited to, carcinoma, lymphoma,
blastoma, sarcoma, and leukemia. More particular examples of such cancers include
squamous cell cancer, lung cancer (including small-cell lung cancer, non-small cell lung
cancer, adenocarcinoma of the lung, and squamous carcinoma of the lung), cancer of the
peritoneum, hepatocellular cancer, gastric or stomach cancer (including gastrointestinal
cancer), pancreatic cancer, glioblastoma, cervical cancer, ovarian cancer, liver cancer,
bladder cancer, hepatoma, breast cancer, colon cancer, colorectal cancer, endometrial or
uterine carcinoma, salivary gland carcinoma, kidney or renal cancer, liver cancer, prostate
cancer, vulval cancer, thyroid cancer, hepatic carcinoma and various types of head and neck
cancer, as well as B-cell lymphoma (including low grade/follicular non-Hodgkin's lymphoma
(NHL); small lymphocytic (SL) NHL; intermediate grade/follicular NHL; intermediate grade
diffuse NHL; high grade immunoblastic NHL; high grade lymphoblastic NHL; high grade
small non-cleaved cell NHL; bulky disease NHL; mantle cell lymphoma; AIDS-related
lymphoma; and Waldenstrom's Macroglobulinemia); chronic lymphocytic leukemia (CLL);
acute lymphoblastic leukemia (ALL); Hairy cell leukemia; chronic myeloblastic leukemia;
and post-transplant lymphoproliferative disorder (PTLD), as well as abnormal vascular
proliferation associated with phakomatoses, edema (such as that associated with brain
tumors), and Meigs' syndrome.
As used herein, “metastasis” is meant the spread of cancer from its primary site to
other places in the body. Cancer cells can break away from a primary tumor, penetrate into
lymphatic and blood vessels, circulate through the bloodstream, and grow in a distant focus
(metastasize) in normal tissues elsewhere in the body. Metastasis can be local or distant.
Metastasis is a sequential process, contingent on tumor cells breaking off from the primary
tumor, traveling through the bloodstream, and stopping at a distant site. At the new site, the
cells establish a blood supply and can grow to form a life-threatening mass. Both stimulatory
and inhibitory molecular pathways within the tumor cell regulate this behavior, and
interactions between the tumor cell and host cells in the distant site are also significant.
An “effective amount” is at least the minimum concentration required to effect a
measurable improvement or prevention of a particular disorder. An effective amount herein
may vary according to factors such as the disease state, age, sex, and weight of the patient,
and the ability of the antibody to elicit a desired response in the individual. An effective
amount is also one in which any toxic or detrimental effects of the treatment are outweighed
by the therapeutically beneficial effects. For prophylactic use, beneficial or desired results
include results such as eliminating or reducing the risk, lessening the severity, or delaying the
onset of the disease, including biochemical, histological and/or behavioral symptoms of the
disease, its complications and intermediate pathological phenotypes presenting during
development of the disease. For therapeutic use, beneficial or desired results include clinical
results such as decreasing one or more symptoms resulting from the disease, increasing the
quality of life of those suffering from the disease, decreasing the dose of other medications
required to treat the disease, enhancing effect of another medication such as via targeting,
delaying the progression of the disease, and/or prolonging survival. In the case of cancer or
tumor, an effective amount of the drug may have the effect in reducing the number of cancer
cells; reducing the tumor size; inhibiting (i.e., slow to some extent or desirably stop) cancer
cell infiltration into peripheral organs; inhibit (i.e., slow to some extent and desirably stop)
tumor metastasis; inhibiting to some extent tumor growth; and/or relieving to some extent
one or more of the symptoms associated with the disorder. An effective amount can be
administered in one or more administrations. For purposes of this description, an effective
amount of drug, compound, or pharmaceutical composition is an amount sufficient to
accomplish prophylactic or therapeutic treatment either directly or indirectly. As is
understood in the clinical context, an effective amount of a drug, compound, or
pharmaceutical composition may or may not be achieved in conjunction with another drug,
compound, or pharmaceutical composition. Thus, an “effective amount” may be considered
in the context of administering one or more therapeutic agents, and a single agent may be
considered to be given in an effective amount if, in conjunction with one or more other
agents, a desirable result may be or is achieved.
As used herein, “in conjunction with” refers to administration of one treatment
modality in addition to another treatment modality. As such, “in conjunction with” refers to
administration of one treatment modality before, during, or after administration of the other
treatment modality to the individual.
As used herein, “subject” is meant a mammal, including, but not limited to, a human
or non-human mammal, such as a bovine, equine, canine, ovine, or feline. Preferably, the
subject is a human. Patients are also subjects herein.
As used herein, “complete response” or “CR” refers to disappearance of all target
lesions; “partial response” or “PR” refers to at least a 30% decrease in the sum of the longest
diameters (SLD) of target lesions, taking as reference the baseline SLD; and “stable disease”
or “SD” refers to neither sufficient shrinkage of target lesions to qualify for PR, nor sufficient
increase to qualify for PD, taking as reference the smallest SLD since the treatment started.
As used herein, “progressive disease” or “PD” refers to at least a 20% increase in
the SLD of target lesions, taking as reference the smallest SLD recorded since the treatment
started or the presence of one or more new lesions.
As used herein, “progression free survival” (PFS) refers to the length of time during
and after treatment during which the disease being treated (e.g., cancer) does not get worse.
Progression-free survival may include the amount of time patients have experienced a
complete response or a partial response, as well as the amount of time patients have
experienced stable disease.
As used herein, "overall response rate" (ORR) refers to the sum of complete
response (CR) rate and partial response (PR) rate.
As used herein, "overall survival" refers to the percentage of individuals in a group
who are likely to be alive after a particular duration of time.
A “chemotherapeutic agent” is a chemical compound useful in the treatment of
cancer. Examples of chemotherapeutic agents include alkylating agents such as thiotepa and
cyclophosphamide (CYTOXAN®); alkyl sulfonates such as busulfan, improsulfan, and
piposulfan; aziridines such as benzodopa, carboquone, meturedopa, and uredopa;
ethylenimines and methylamelamines including altretamine, triethylenemelamine,
trietylenephosphoramide, triethiylenethiophosphoramide and trimethylolomelamine;
acetogenins (especially bullatacin and bullatacinone); deltatetrahydrocannabinol
(dronabinol, MARINOL®); beta-lapachone; lapachol; colchicines; betulinic acid; a
camptothecin (including the synthetic analogue topotecan (HYCAMTIN®), CPT-11
(irinotecan, CAMPTOSAR®), acetylcamptothecin, scopolectin, and 9-aminocamptothecin);
bryostatin; pemetrexed; callystatin; CC-1065 (including its adozelesin, carzelesin and
bizelesin synthetic analogues); podophyllotoxin; podophyllinic acid; teniposide;
cryptophycins (particularly cryptophycin 1 and cryptophycin 8); dolastatin; duocarmycin
(including the synthetic analogues, KW-2189 and CB1-TM1); eleutherobin; pancratistatin;
TLK-286; CDP323, an oral alpha-4 integrin inhibitor; a sarcodictyin; spongistatin; nitrogen
mustards such as chlorambucil, chlornaphazine, cholophosphamide, estramustine, ifosfamide,
mechlorethamine, mechlorethamine oxide hydrochloride, melphalan, novembichin,
phenesterine, prednimustine, trofosfamide, uracil mustard; nitrosureas such as carmustine,
chlorozotocin, fotemustine, lomustine, nimustine, and ranimnustine; antibiotics such as the
enediyne antibiotics (e. g., calicheamicin, especially calicheamicin gamma1I and
calicheamicin omegaI1 (see, e.g., Nicolaou et al., Angew. Chem Intl. Ed. Engl., 33: 183-186
(1994)); dynemicin, including dynemicin A; an esperamicin; as well as neocarzinostatin
chromophore and related chromoprotein enediyne antibiotic chromophores), aclacinomysins,
actinomycin, authramycin, azaserine, bleomycins, cactinomycin, carabicin, carminomycin,
carzinophilin, chromomycinis, dactinomycin, daunorubicin, detorubicin, 6-diazooxo-L-
norleucine, doxorubicin (including ADRIAMYCIN®, morpholino-doxorubicin,
cyanomorpholino-doxorubicin, 2-pyrrolino-doxorubicin, doxorubicin HCl liposome injection
(DOXIL®) and deoxydoxorubicin), epirubicin, esorubicin, idarubicin, marcellomycin,
mitomycins such as mitomycin C, mycophenolic acid, nogalamycin, olivomycins,
peplomycin, potfiromycin, puromycin, quelamycin, rodorubicin, streptonigrin, streptozocin,
tubercidin, ubenimex, zinostatin, zorubicin; anti-metabolites such as methotrexate,
gemcitabine (GEMZAR®), tegafur (UFTORAL®), capecitabine (XELODA®), an
epothilone, and 5-fluorouracil (5-FU); folic acid analogues such as denopterin, methotrexate,
pteropterin, trimetrexate; purine analogs such as fludarabine, 6-mercaptopurine, thiamiprine,
thioguanine; pyrimidine analogs such as ancitabine, azacitidine, 6-azauridine, carmofur,
cytarabine, dideoxyuridine, doxifluridine, enocitabine, floxuridine, and imatinib (a 2-
phenylaminopyrimidine derivative), as well as other c-Kit inhibitors; anti-adrenals such as
aminoglutethimide, mitotane, trilostane; folic acid replenisher such as frolinic acid;
aceglatone; aldophosphamide glycoside; aminolevulinic acid; eniluracil; amsacrine;
bestrabucil; bisantrene; edatraxate; defofamine; demecolcine; diaziquone; elfornithine;
elliptinium acetate; etoglucid; gallium nitrate; hydroxyurea; lentinan; lonidainine;
maytansinoids such as maytansine and ansamitocins; mitoguazone; mitoxantrone;
mopidanmol; nitraerine; pentostatin; phenamet; pirarubicin; losoxantrone; 2-ethylhydrazide;
procarbazine; PSK® polysaccharide complex (JHS Natural Products, Eugene, OR); razoxane;
rhizoxin; sizofiran; spirogermanium; tenuazonic acid; triaziquone; 2,2',2"-
trichlorotriethylamine; trichothecenes (especially T-2 toxin, verracurin A, roridin A and
anguidine); urethan; vindesine (ELDISINE®, FILDESIN®); dacarbazine; mannomustine;
mitobronitol; mitolactol; pipobroman; gacytosine; arabinoside ("Ara-C"); thiotepa; taxoids,
e.g., paclitaxel (TAXOL®), albumin-engineered nanoparticle formulation of paclitaxel
), and doxetaxel (TAXOTERE®); chloranbucil; 6-thioguanine;
(ABRAXANE
mercaptopurine; methotrexate; platinum analogs such as cisplatin and carboplatin; vinblastine
(VELBAN®); platinum; etoposide (VP-16); ifosfamide; mitoxantrone; vincristine
(ONCOVIN®); oxaliplatin; leucovovin; vinorelbine (NAVELBINE®); novantrone;
edatrexate; daunomycin; aminopterin; ibandronate; topoisomerase inhibitor RFS 2000;
difluorometlhylornithine (DMFO); retinoids such as retinoic acid; pharmaceutically
acceptable salts, acids or derivatives of any of the above; as well as combinations of two or
more of the above such as CHOP, an abbreviation for a combined therapy of
cyclophosphamide, doxorubicin, vincristine, and prednisolone, and FOLFOX, an
abbreviation for a treatment regimen with oxaliplatin (ELOXATIN ) combined with 5-FU
and leucovovin.
Also included in this definition are anti-hormonal agents that act to regulate, reduce,
block, or inhibit the effects of hormones that can promote the growth of cancer, and are often
in the form of systemic, or whole-body treatment. They may be hormones themselves.
Examples include anti-estrogens and selective estrogen receptor modulators (SERMs),
including, for example, tamoxifen (including NOLVADEX® tamoxifen), raloxifene
(EVISTA®), droloxifene, 4-hydroxytamoxifen, trioxifene, keoxifene, LY117018,
onapristone, and toremifene (FARESTON®); anti-progesterones; estrogen receptor down-
regulators (ERDs); estrogen receptor antagonists such as fulvestrant (FASLODEX®); agents
that function to suppress or shut down the ovaries, for example, leutinizing hormone-
releasing hormone (LHRH) agonists such as leuprolide acetate (LUPRON® and
ELIGARD®), goserelin acetate, buserelin acetate and tripterelin; anti-androgens such as
flutamide, nilutamide and bicalutamide; and aromatase inhibitors that inhibit the enzyme
aromatase, which regulates estrogen production in the adrenal glands, such as, for example,
4(5)-imidazoles, aminoglutethimide, megestrol acetate (MEGASE®), exemestane
(AROMASIN®), formestanie, fadrozole, vorozole (RIVISOR®), letrozole (FEMARA®),
and anastrozole (ARIMIDEX®). In addition, such definition of chemotherapeutic agents
includes bisphosphonates such as clodronate (for example, BONEFOS® or OSTAC®),
etidronate (DIDROCAL®), NE-58095, zoledronic acid/zoledronate (ZOMETA®),
alendronate (FOSAMAX®), pamidronate (AREDIA®), tiludronate (SKELID®), or
risedronate (ACTONEL®); as well as troxacitabine (a 1,3-dioxolane nucleoside cytosine
analog); anti-sense oligonucleotides, particularly those that inhibit expression of genes in
signaling pathways implicated in abherant cell proliferation, such as, for example, PKC-
alpha, Raf, H-Ras, and epidermal growth factor receptor (EGF-R); vaccines such as
THERATOPE® vaccine and gene therapy vaccines, for example, ALLOVECTIN® vaccine,
LEUVECTIN® vaccine, and VAXID® vaccine; topoisomerase 1 inhibitor (e.g.,
LURTOTECAN®); an anti-estrogen such as fulvestrant; a Kit inhibitor such as imatinib or
EXEL-0862 (a tyrosine kinase inhibitor); EGFR inhibitor such as erlotinib or cetuximab; an
anti-VEGF inhibitor such as bevacizumab; arinotecan; rmRH (e.g., ABARELIX®); lapatinib
and lapatinib ditosylate (an ErbB-2 and EGFR dual tyrosine kinase small-molecule inhibitor
also known as GW572016); 17AAG (geldanamycin derivative that is a heat shock protein
(Hsp) 90 poison), and pharmaceutically acceptable salts, acids or derivatives of any of the
above.
As used herein, the term “cytokine” refers generically to proteins released by one
cell population that act on another cell as intercellular mediators or have an autocrine effect
on the cells producing the proteins. Examples of such cytokines include lymphokines,
monokines; interleukins (“ILs”) such as IL-1, IL-1 α, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-8,
IL-9, IL10, IL-11, IL-12, IL-13, IL-15, IL-17A-F, IL-18 to IL-29 (such as IL-23), IL-31,
including PROLEUKIN rIL-2; a tumor-necrosis factor such as TNF- α or TNF- β, TGF-β1-3;
and other polypeptide factors including leukemia inhibitory factor (“LIF”), ciliary
neurotrophic factor (“CNTF”), CNTF-like cytokine (“CLC”), cardiotrophin (“CT”), and kit
ligand (“KL”).
As used herein, the term "chemokine" refers to soluble factors (e.g., cytokines) that
have the ability to selectively induce chemotaxis and activation of leukocytes. They also
trigger processes of angiogenesis, inflammation, wound healing, and tumorigenesis.
Example chemokines include IL-8, a human homolog of murine keratinocyte chemoattractant
(KC).
As used herein and in the appended claims, the singular forms “a,” “or,” and “the”
include plural referents unless the context clearly dictates otherwise.
Reference to “about” a value or parameter herein includes (and describes) variations
that are directed to that value or parameter per se. For example, description referring to
“about X” includes description of “X”.
The phrase "pharmaceutically acceptable salt" as used herein, refers to
pharmaceutically acceptable organic or inorganic salts of a compound of the description.
Exemplary salts include, but are not limited, to sulfate, citrate, acetate, oxalate, chloride,
bromide, iodide, nitrate, bisulfate, phosphate, acid phosphate, isonicotinate, lactate, salicylate,
acid citrate, tartrate, oleate, tannate, pantothenate, bitartrate, ascorbate, succinate, maleate,
gentisinate, fumarate, gluconate, glucuronate, saccharate, formate, benzoate, glutamate,
methanesulfonate “mesylate”, ethanesulfonate, benzenesulfonate, p-toluenesulfonate,
pamoate (i.e., 1,1'-methylene-bis -(2-hydroxynaphthoate)) salts, alkali metal (e.g., sodium
and potassium) salts, alkaline earth metal (e.g., magnesium) salts, and ammonium salts. A
pharmaceutically acceptable salt may involve the inclusion of another molecule such as an
acetate ion, a succinate ion or other counter ion. The counter ion may be any organic or
inorganic moiety that stabilizes the charge on the parent compound. Furthermore, a
pharmaceutically acceptable salt may have more than one charged atom in its structure.
Instances where multiple charged atoms are part of the pharmaceutically acceptable salt can
have multiple counter ions. Hence, a pharmaceutically acceptable salt can have one or more
charged atoms and/or one or more counter ion.
If the compound of the description is a base, the desired pharmaceutically
acceptable salt may be prepared by any suitable method available in the art, for example,
treatment of the free base with an inorganic acid, such as hydrochloric acid, hydrobromic
acid, sulfuric acid, nitric acid, methanesulfonic acid, phosphoric acid and the like, or with an
organic acid, such as acetic acid, maleic acid, succinic acid, mandelic acid, fumaric acid,
malonic acid, pyruvic acid, oxalic acid, glycolic acid, salicylic acid, a pyranosidyl acid, such
as glucuronic acid or galacturonic acid, an alpha hydroxy acid, such as citric acid or tartaric
acid, an amino acid, such as aspartic acid or glutamic acid, an aromatic acid, such as benzoic
acid or cinnamic acid, a sulfonic acid, such as p-toluenesulfonic acid or ethanesulfonic acid,
or the like.
If the compound of the description is an acid, the desired pharmaceutically
acceptable salt may be prepared by any suitable method, for example, treatment of the free
acid with an inorganic or organic base, such as an amine (primary, secondary or tertiary), an
alkali metal hydroxide or alkaline earth metal hydroxide, or the like. Illustrative examples of
suitable salts include, but are not limited to, organic salts derived from amino acids, such as
glycine and arginine, ammonia, primary, secondary, and tertiary amines, and cyclic amines,
such as piperidine, morpholine and piperazine, and inorganic salts derived from sodium,
calcium, potassium, magnesium, manganese, iron, copper, zinc, aluminum and lithium.
The phrase "pharmaceutically acceptable" indicates that the substance or
composition must be compatible chemically and/or toxicologically, with the other ingredients
comprising a formulation, and/or the mammal being treated therewith.
It is understood that embodimentsembodiment and variations of the invention
described herein include “consisting” and/or “consisting essentially of” embodiments and
variations.
III. Methods
In one embodiment, described herein is a method for treating or delaying
progression of cancer in an individual comprising administering to the individual an effective
amount of a PD-1 axis binding antagonist in combination with an agent that decreases or
inhibits TIGIT expression and/or activity.
In another embodiment, described herein is a method for reducing or inhibiting
cancer relapse or cancer progression in an individual comprising administering to the
individual an effect amount of a PD-1 axis binding antagonist in combination with an agent
that that decreases or inhibits TIGIT expression and/or activity. As disclosed herein, cancer
relapse and/or cancer progression include, without limitation, cancer metastasis.
In another embodiment, described herein is a method for treating or delaying
progression of an immune related disease in an individual comprising administering to the
individual an effect amount of a PD-1 axis binding antagonist in combination with an agent
that that decreases or inhibits TIGIT expression and/or activity.
In another embodiment, described herein is a method for reducing or inhibiting
progression of an immune related disease in an individual comprising administering to the
individual an effect amount of a PD-1 axis binding antagonist in combination with an agent
that that decreases or inhibits TIGIT expression and/or activity.
In some embodiments, the immune related disease is associated with T cell
dysfunctional disorder. In some embodiments, the immune related disease is a viral
infection. In certain embodiments, the viral infection is a chronic viral infection. In some
embodiments, T cell dysfunctional disorder is characterized by decreased responsiveness to
antigenic stimulation. In some embodiments, the T cell dysfunctional disorder is
characterized by T cell anergy or decreased ability to secrete cytokines, proliferate or execute
cytolytic activity. In some embodiments, the T cell dysfunctional disorder is characterized by
T cell exhaustion. In some embodiments, the T cells are CD4+ and CD8+ T cells. In some
embodiments, the T cell dysfunctional disorder includes unresolved acute infection, chronic
infection and tumor immunity.
In another embodiment, described herein is a method for increasing, enhancing or
stimulating an immune response or function in an individual comprising administering to the
individual an effect amount of a PD-1 axis binding antagonist in combination with an agent
that decreases or inhibits TIGIT expression and/or activity.
In another embodiment, described herein is a method of treating or delaying
progression of cancer in an individual comprising administering to the individual an effective
amount of a PD-1 axis binding antagonist and an agent that modulates the CD226 expression
and/or activity.
In another embodiment, described herein is a method for reducing or inhibiting
cancer relapse or cancer progression in an individual comprising administering to the
individual an effective amount of a PD-1 axis binding antagonist and an agent that modulates
the CD226 expression and/or activity.
In another embodiment, described herein is a method for treating or delaying
progression of an immune related disease in an individual comprising administering to the
individual an effective amount of a PD-1 axis binding antagonist and an agent that modulates
the CD226 expression and/or activity.
In another embodiment, described herein is a method for reducing or inhibiting
progression of an immune related disease in an individual comprising administering to the
individual an effective amount of a PD-1 axis binding antagonist and agent that modulates the
CD226 expression and/or activity.
In some embodiments, the immune related disease is associated with T cell
dysfunctional disorder. In some embodiments, the immune related disease is a viral
infection. In certain embodiments, the viral infection is a chronic viral infection. In some
embodiments, the T cell dysfunctional disorder is characterized by decreased responsiveness
to antigenic stimulation. In some embodiments, the T cell dysfunctional disorder is
characterized by T cell anergy, or decreased ability to secrete cytokines, proliferate or
execute cytolytic activity. In some embodiments, the T cell dysfunctional disorder is
characterized by T cell exhaustion. In some embodiments, the T cells are CD4+ and CD8+ T
cells. In some embodiments, the immune related disease is selected from the group
consisting of unresolved acute infection, chronic infection and tumor immunity.
In another embodiment, described herein is a method of increasing, enhancing or
stimulating an immune response or function in an individual by administering to the
individual an effective amount of a PD-1 axis binding antagonist and an agent that modulates
the CD226 expression and/or activity.
In some embodiments, the agent that modulates the CD226 expression and/or
activity is capable of increasing and/or stimulating CD226 expression and/or activity;
increasing and/or stimulating the interaction of CD226 with PVR, PVRL2, and/or PVRL3;
and increasing and/or stimulating the intracellular signaling mediated by CD226 binding to
PVR, PVRL2, and/or PVRL3. As used herein, an agent that is capable of increasing and/or
stimulating CD226 expression and/or activity includes, without limitation, agents that
increase and/or stimulate CD226 expression and/or activity. As used herein, an agent that is
capable of increasing and/or stimulating the interaction of CD226 with PVR, PVRL2, and/or
PVRL3 includes, without limitation, agents that increase and/or stimulate the interaction of
CD226 with PVR, PVRL2, and/or PVRL3. As used herein, an agent that is capable of
increasing and/or stimulating the intracellular signaling mediated by CD226 binding to PVR,
PVRL2, and/or PVRL3 includes, without limitation, agents that increase and/or stimulate the
intracellular signaling mediated by CD226 binding to PVR, PVRL2, and/or PVRL3.
In some embodiments, the agent that modulates the CD226 expression and/or
activity is selected from an agent that inhibits and/or blocks the interaction of CD226 with
TIGIT, an antagonist of TIGIT expression and/or activity, an antagonist of PVR expression
and/or activity, an agent that inhibits and/or blocks the interaction of TIGIT with PVR, an
agent that inhibits and/or blocks the interaction of TIGIT with PVRL2, an agent that inhibits
and/or blocks the interaction of TIGIT with PVRL3, an agent that inhibits and/or blocks the
intracellular signaling mediated by TIGIT binding to PVR, an agent that inhibits and/or
blocks the intracellular signaling mediated by TIGIT binding to PVRL2, an agent that inhibits
and/or blocks the intracellular signaling mediated by TIGIT binding to PVRL3, and
combinations thereof.
In some embodiments, the agent that inhibits and/or blocks the interaction of
CD226 with TIGIT is a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In
some embodiments, the agent that inhibits and/or blocks the interaction of CD226 with
TIGIT is an anti-TIGIT antibody or antigen-binding fragment thereof. In some embodiments,
the agent that inhibits and/or blocks the interaction of CD226 with TIGIT is an inhibitory
nucleic acid selected from an antisense polynucleotide, an interfering RNA, a catalytic RNA,
and an RNA-DNA chimera.
In some embodiments, the antagonist of TIGIT expression and/or activity is a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide. In some embodiments, the
antagonist of TIGIT expression and/or activity is an anti-TIGIT antibody or antigen-binding
fragment thereof. In some embodiments, the antagonist of TIGIT expression and/or activity
is an inhibitory nucleic acid selected from an antisense polynucleotide, an interfering RNA, a
catalytic RNA, and an RNA-DNA chimera.
In some embodiments, the antagonist of PVR expression and/or activity is a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide. In some embodiments, the
antagonist of PVR expression and/or activity is selected from a small molecule inhibitor, an
inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVR is a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In some
embodiments, the agent that inhibits and/or blocks the interaction of TIGIT with PVR is
selected from a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVRL2 is selected from a small molecule inhibitor, an inhibitory antibody or antigen-
binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVRL3 is selected from a small molecule inhibitor, an inhibitory antibody or antigen-
binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVR is a small molecule inhibitor, an inhibitory
antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an
inhibitory polypeptide. In some embodiments, the agent that inhibits and/or blocks the
intracellular signaling mediated by TIGIT binding to PVR is selected from a small molecule
inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an
inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVRL2 is selected from a small molecule inhibitor,
an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVRL3 is selected from a small molecule inhibitor,
an inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In another embodiment, described herein is a method of increasing, enhancing or
stimulating an immune response or function in an individual by administering to the
individual an effective amount of an agent that decreases or inhibits TIGIT expression and/or
activity and an agent that decreases or inhibits the expression and/or activity of one or more
additional immune co-inhibitory receptors. In some embodiments, the one of more additional
immune co-inhibitory receptor is selected from PD-1, CTLA-4, LAG3, TIM3, BTLA VISTA,
B7H4, and CD96. In some embodiments, one of more additional immune co-inhibitory
receptor is selected from PD-1, CTLA-4, LAG3 and TIM3.
In another embodiment, described herein is a method of increasing, enhancing or
stimulating an immune response or function in an individual by administering to the
individual an effective amount of an agent that decreases or inhibits TIGIT expression and/or
activity and an agent that increases or activates the expression and/or activity of one or more
additional immune co-stimulatory receptors. In some embodiments, the one of more
additional immune co-stimulatory receptor is selected from CD226, OX-40, CD28, CD27,
CD137, HVEM, GITR, MICA, ICOS, NKG2D, and 2B4. In some embodiments, the one or
more additional immune co-stimulatory receptor is selected from CD226, OX-40, CD28,
CD27, CD137, HVEM, and GITR. In some embodiments, the one of more additional
immune co-stimulatory receptor is selected from OX-40 and CD27.
The methods of this description may find use in treating conditions where enhanced
immunogenicity is desired such as increasing tumor immunogenicity for the treatment of
cancer or T cell dysfunctional disorders.
A variety of cancers may be treated, or their progression may be delayed.
In some embodiments, the individual has non-small cell lung cancer. The non-small
cell lung cancer may be at early stage or at late stage. In some embodiments, the individual
has small cell lung cancer. The small cell lung cancer may be at early stage or at late stage.
In some embodiments, the individual has renal cell cancer. The renal cell cancer may be at
early stage or at late stage. In some embodiments, the individual has colorectal cancer. The
colorectal cancer may be at early stage or late stage. In some embodiments, the individual
has ovarian cancer. The ovarian cancer may be at early stage or at late stage. In some
embodiments, the individual has breast cancer. The breast cancer may be at early stage or at
late stage. In some embodiments, the individual has pancreatic cancer. The pancreatic
cancer may be at early stage or at late stage. In some embodiments, the individual has gastric
carcinoma. The gastric carcinoma may be at early stage or at late stage. In some
embodiments, the individual has bladder cancer. The bladder cancer may be at early stage or
at late stage. In some embodiments, the individual has esophageal cancer. The esophageal
cancer may be at early stage or at late stage. In some embodiments, the individual has
mesothelioma. The mesothelioma may be at early stage or at late stage. In some
embodiments, the individual has melanoma. The melanoma may be at early stage or at late
stage. In some embodiments, the individual has head and neck cancer. The head and neck
cancer may be at early stage or at late stage. In some embodiments, the individual has
thyroid cancer. The thyroid cancer may be at early stage or at late stage. In some
embodiments, the individual has sarcoma. The sarcoma may be at early stage or late stage. In
some embodiments, the individual has prostate cancer. The prostate cancer may be at early
stage or at late stage. In some embodiments, the individual has glioblastoma. The
glioblastoma may be at early stage or at late stage. In some embodiments, the individual has
cervical cancer. The cervical cancer may be at early stage or at late stage. In some
embodiments, the individual has thymic carcinoma. The thymic carcinoma may be at early
stage or at late stage. In some embodiments, the individual has leukemia. The leukemia may
be at early stage or at late stage. In some embodiments, the individual has lymphomas. The
lymphoma may be at early stage or at late stage. In some embodiments, the individual has
myelomas. The myelomas may be at early stage or at late stage. In some embodiments, the
individual has mycoses fungoids. The mycoses fungoids may be at early stage or at late
stage. In some embodiments, the individual has merkel cell cancer. The merkel cell cancer
may be at early stage or at late stage. In some embodiments, the individual has hematologic
malignancies. The hematological malignancies may be early stage or late stage. In some
embodiments, the individual is a human.
In some embodiments of the methods of this description, the CD4 and/or CD8 T
cells in the individual have increased or enhanced priming, activation, proliferation, cytokine
release and/or cytolytic activity relative to prior to the administration of the combination.
In some embodiments of the methods of this description, the number of CD4 and/or
CD8 T cells is elevated relative to prior to administration of the combination. In some
embodiments of the methods of this description, the number of activated CD4 and/or CD8 T
cells is elevated relative to prior to administration of the combination.
In some embodiments of the methods of this description, the activated CD4 and/or
CD8 T cells is characterized by γ-IFN producing CD4 and/or CD8 T cells and/or enhanced
cytolytic activity relative to prior to the administration of the combination.
In some embodiments of the methods of this description, the CD4 and/or CD8 T
cells exhibit increased release of cytokines selected from the group consisting of IFN-γ, TNF-
α and interleukins.
In some embodiments of the methods of this description, the CD4 and/or CD8 T
cell is an effector memory T cell. In some embodiments of the methods of this description,
the CD4 and/or CD8 effector memory T cell is characterized by γ-IFN producing CD4
and/or CD8 T cells and/or enhanced cytolytic activity. In some embodiments of the methods
of this description, the CD4 and/or CD8 effector memory T cell is characterized by having
high low
the expression of CD44 CD62L .
In some embodiments of the methods of this description, the cancer has elevated
levels of T cell infiltration.
In some embodiments, the methods of the description may further comprise
administering an additional therapy. The additional therapy may be radiation therapy,
surgery, chemotherapy, gene therapy, DNA therapy, viral therapy, RNA therapy,
immunotherapy, bone marrow transplantation, nanotherapy, monoclonal antibody therapy, or
a combination of the foregoing. The additional therapy may be in the form of an adjuvant or
neoadjuvant therapy. In some embodiments, the additional therapy is the administration of
side-effect limiting agents (e.g., agents intended to lessen the occurrence and/or severity of
side effects of treatment, such as anti-nausea agents, etc.). In some embodiments, the
additional therapy is radiation therapy. In some embodiments, the additional therapy is
surgery. In some embodiments, the additional therapy may be one or more of the
chemotherapeutic agents described hereinabove.
Any of the PD-1 axis binding antagonists and agents that decreases or inhibits
TIGIT expression and/or activity described below may be used in the methods of the
description.
In some embodiments, any of the targets described herein (e.g., PD-1, PD-L1, PD-
L2, CTLA-4, LAG3, TIM3, BTLA, VISTA, B7H4, CD96, B7-1, TIGIT, CD226, OX-40,
CD28, CD27, CD137, HVEM, GITR, MICA, ICOS, NKG2D, 2B4, etc.) is a human protein.
PD-1 axis binding antagonists
Described herein is a method for treatment or delaying progression of cancer in an
individual comprising administering to the individual an effective amount of a PD-1 axis
binding antagonist in combination with an agent that decreases or inhibits TIGIT expression
and/or activity. Described herein is also a method for reducing or inhibiting cancer relapse or
cancer progression in an individual comprising administering to the individual an effect
amount of a PD-1 axis binding antagonist in combination with an agent that that decreases or
inhibits TIGIT expression and/or activity. Described herein is also a method for treating or
delaying progression of an immune related disease in an individual comprising administering
to the individual an effect amount of a PD-1 axis binding antagonist in combination with an
agent that that decreases or inhibits TIGIT expression and/or activity. Described herein is
also a method for reducing or inhibiting progression of an immune related disease in an
individual comprising administering to the individual an effect amount of a PD-1 axis
binding antagonist in combination with an agent that that decreases or inhibits TIGIT
expression and/or activity. Described herein is also a method for increasing, enhancing or
stimulating an immune response or function in an individual comprising administering to the
individual an effect amount of a PD-1 axis binding antagonist in combination with an agent
that decreases or inhibits TIGIT expression and/or activity.
For example, a PD-1 axis binding antagonist includes a PD-1 binding antagonist, a
PD-L1 binding antagonist and a PD-L2 binding antagonist.
In some embodiments, the PD-1 binding antagonist is a molecule that inhibits the
binding of PD-1 to its ligand binding partners. In a specific embodiment the PD-1 ligand
binding partners are PD-L1 and/or PD-L2. In another embodiment, a PD-L1 binding
antagonist is a molecule that inhibits the binding of PD-L1 to its binding partners. In a
specific embodiment, PD-L1 binding partners are PD-1 and/or B7-1. In another embodiment,
the PD-L2 binding antagonist is a molecule that inhibits the binding of PD-L2 to its binding
partners. In a specific embodiment, a PD-L2 binding partner is PD-1. The antagonist may be
an antibody, an antigen binding fragment thereof, an immunoadhesin, a fusion protein, or
oligopeptide.
In some embodiments, the PD-1 binding antagonist is selected from MDX-1106
(nivolumab), Merck 3745 (lambrolizumab), CT-011 (pidilizumab), and AMP-224. In some
embodiments, the PD-L1 binding antagonist is selected from YW243.55.S70, MPDL3280A,
MDX-1105, and MEDI 4736. In some embodiments, the PD-L2 binding antagonist is AMP-
224. In some embodiments, the PD-1 binding antagonist is AMP-224. MDX-1105, also
known as BMS-936559, is an anti-PD-L1 antibody described in WO2007/005874. Antibody
YW243.55.S70 (SEQ ID No. 20) is an anti-PD-L1 described in A1 and US
8,217,149, which are incorporated herein by reference. MDX-1106, also known as MDX-
1106-04, ONO-4538, BMS-936558, or nivolumab, is an anti-PD-1 antibody described in
WO2006/121168. Merck 3745, also known as MK 3475, MK-3475, SCH-900475, or
lambrolizumab, is an anti-PD-1 antibody described in WO2009/114335. CT-011, also known
as hBAT, hBAT-1, or pidilizumab, is an anti-PD-1 antibody described in WO2009/101611.
AMP-224, also known as B7-DCIg, is a PD-L2-Fc fusion soluble receptor described in
WO2010/027827 and WO2011/066342.
Examples of anti-PD-L1 antibodies useful for the methods of this description, and
methods for making thereof are described in PCT patent application A1
and US 8,217,149, which are incorporated herein by reference.
In some embodiments, the PD-1 axis binding antagonist is an anti-PD-L1 antibody.
In some embodiments, the anti-PD-L1 antibody is capable of inhibiting binding between PD-
L1 and PD-1 and/or between PD-L1 and B7-1. In some embodiments, the anti-PD-L1
antibody is a monoclonal antibody. In some embodiments, the anti-PD-L1 antibody is an
antibody fragment selected from the group consisting of Fab, Fab’-SH, Fv, scFv, and (Fab’)
fragments. In some embodiments, the anti-PD-L1 antibody is a humanized antibody. In
some embodiments, the anti-PD-L1 antibody is a human antibody.
The anti-PD-L1 antibodies useful in this description, including compositions
containing such antibodies, such as those described in A1 and US
8,217,149, may be used in combination with an agent that decreases or inhibits TIGIT
expression and/or activity with or without any additional therapy (e.g., chemotherapy) to treat
cancer or an immune related disease (e.g., T cell dysfunctional disorder, viral infection,
chronic viral infection, etc.).
In one embodiment, the anti-PD-L1 antibody contains a heavy chain variable region
polypeptide comprising an HVR-H1, HVR-H2 and HVR-H3 sequence, wherein:
(a) the HVR-H1 sequence is GFTFSX SWIH (SEQ ID NO: 33);
(b) the HVR-H2 sequence is AWIX PYGGSX YYADSVKG (SEQ ID NO:34);
(c) the HVR-H3 sequence is RHWPGGFDY (SEQ ID NO:19);
further wherein: X is D or G; X is S or L; X is T or S.
1 2 3
In one specific embodiment, X is D; X is S and X is T. In another embodiment,
1 2 3
the polypeptide further comprises variable region heavy chain framework sequences
juxtaposed between the HVRs according to the formula: (HC-FR1)-(HVR-H1)-(HC-FR2)-
(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4). In yet another embodiment, the framework
sequences are derived from human consensus framework sequences. In a further
embodiment, the framework sequences are VH subgroup III consensus framework. In a still
further embodiment, at least one of the framework sequences is the following:
HC-FR1 is EVQLVESGGGLVQPGGSLRLSCAAS (SEQ ID NO:25)
HC-FR2 is WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 is RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 is WGQGTLVTVSA (SEQ ID NO:28).
In a still further embodiment, the heavy chain polypeptide is further combined with
a variable region light chain comprising an HVR-L1, HVR-L2 and HVR-L3, wherein:
(a) the HVR-L1 sequence is RASQX X X TX XA (SEQ ID NO:35);
4 5 6 7 8
(b) the HVR-L2 sequence is SASX LXS, (SEQ ID NO:36);
9 10
(c) the HVR-L3 sequence is QQX X X X PXT (SEQ ID NO:37);
11 12 13 14 15
further wherein: X is D or V; X is V or I; X is S or N; X is A or F; X is V or L; X
4 5 6 7 8 9
is F or T; X is Y or A; X is Y, G, F, or S; X is L, Y, F or W; X is Y, N, A, T, G,
11 12 13
F or I; X is H, V, P, T or I; X is A, W, R, P or T.
14 15
In a still further embodiment, X4 is D; X5 is V; X6 is S; X7 is A; X8 is V; X9 is F;
X10 is Y; X11 is Y; X12 is L; X13 is Y; X14 is H; X15 is A. In a still further embodiment,
the light chain further comprises variable region light chain framework sequences juxtaposed
between the HVRs according to the formula: (LC-FR1)-(HVR-L1)-(LC-FR2)-(HVR-L2)-
(LC-FR3)-(HVR-L3)-(LC-FR4). In a still further embodiment, the framework sequences are
derived from human consensus framework sequences. In a still further embodiment, the
framework sequences are VL kappa I consensus framework. In a still further embodiment, at
least one of the framework sequence is the following:
LC-FR1 is DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 is WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 is GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC(SEQ ID NO:31)
LC-FR4 is FGQGTKVEIKR (SEQ ID NO:32).
In another embodiment, described is an isolated anti-PD-L1 antibody or antigen
binding fragment comprising a heavy chain and a light chain variable region sequence,
wherein:
(a) the heavy chain comprises and HVR-H1, HVR-H2 and HVR-H3, wherein further:
(i) the HVR-H1 sequence is GFTFSX SWIH; (SEQ ID
NO:33)
(ii) the HVR-H2 sequence is AWIX PYGGSX YYADSVKG (SEQ ID
NO:34)
(iii) the HVR-H3 sequence is RHWPGGFDY, and (SEQ ID
NO:19)
(b) the light chain comprises and HVR-L1, HVR-L2 and HVR-L3, wherein further:
(i) the HVR-L1 sequence is RASQX X X TX X A (SEQ ID
4 5 6 7 8
NO:35)
(ii) the HVR-L2 sequence is SASX LX S; and (SEQ ID
9 10
NO:36)
(iii) the HVR-L3 sequence is QQX X X X PX T; (SEQ ID
11 12 13 14 15
NO:37)
further wherein: X is D or G; X is S or L; X is T or S; X is D or V; X is V or I; X is S
1 2 3 4 5 6
or N; X is A or F; X is V or L; X is F or T; X is Y or A; X is Y, G, F, or S; X is L,
7 8 9 10 11 12
Y, F or W; X is Y, N, A, T, G, F or I; X is H, V, P, T or I; X is A, W, R, P or T.
13 14 15
In a specific embodiment, X is D; X is S and X is T. In another embodiment, X
1 2 3 4
is D; X is V; X is S; X is A; X is V; X is F; X is Y; X is Y; X is L; X is Y; X is H;
6 7 8 9 10 11 12 13 14
X is A. In yet another embodiment, X is D; X is S and X is T, X is D; X is V; X is S;
1 2 3 4 5 6
X is A; X is V; X is F; X is Y; X is Y; X is L; X is Y; X is H and X is A.
7 8 9 10 11 12 13 14 15
In a further embodiment, the heavy chain variable region comprises one or more
framework sequences juxtaposed between the HVRs as: (HC-FR1)-(HVR-H1)-(HC-FR2)-
(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4), and the light chain variable regions comprises
one or more framework sequences juxtaposed between the HVRs as: (LC-FR1)-(HVR-L1)-
(LC-FR2)-(HVR-L2)-(LC-FR3)-(HVR-L3)-(LC-FR4). In a still further embodiment, the
framework sequences are derived from human consensus framework sequences. In a still
further embodiment, the heavy chain framework sequences are derived from a Kabat
subgroup I, II, or III sequence. In a still further embodiment, the heavy chain framework
sequence is a VH subgroup III consensus framework. In a still further embodiment, one or
more of the heavy chain framework sequences is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAAS(SEQ ID NO:25)
HC-FR2 WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR(SEQ ID NO:27)
HC-FR4 WGQGTLVTVSA (SEQ ID NO:28).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIKR (SEQ ID NO:32).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment the minimal effector function results from an “effector-less Fc mutation” or
aglycosylation. In still a further embodiment, the effector-less Fc mutation is an N297A or
D265A/N297A substitution in the constant region.
In yet another embodiment, described is an anti-PD-L1 antibody comprising a
heavy chain and a light chain variable region sequence, wherein:
(a) the heavy chain further comprises and HVR-H1, HVR-H2 and an HVR-H3
sequence having at least 85% sequence identity to GFTFSDSWIH (SEQ ID
NO:17), AWISPYGGSTYYADSVKG (SEQ ID NO:18) and RHWPGGFDY
(SEQ ID NO:19), respectively, or
(b) the light chain further comprises an HVR-L1, HVR-L2 and an HVR-L3
sequence having at least 85% sequence identity to RASQDVSTAVA (SEQ ID
NO:20), SASFLYS (SEQ ID NO:21) and QQYLYHPAT (SEQ ID NO:22),
respectively.
(c) In a specific embodiment, the sequence identity is 86%, 87%, 88%, 89%,
90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100%. In another
embodiment, the heavy chain variable region comprises one or more
framework sequences juxtaposed between the HVRs as: (HC-FR1)-(HVR-
H1)-(HC-FR2)-(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4), and the light
chain variable regions comprises one or more framework sequences
juxtaposed between the HVRs as: (LC-FR1)-(HVR-L1)-(LC-FR2)-(HVR-L2)-
(LC-FR3)-(HVR-L3)-(LC-FR4). In yet another embodiment, the framework
sequences are derived from human consensus framework sequences. In a still
further embodiment, the heavy chain framework sequences are derived from a
Kabat subgroup I, II, or III sequence. In a still further embodiment, the heavy
chain framework sequence is a VH subgroup III consensus framework. In a
still further embodiment, one or more of the heavy chain framework sequences
is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAAS (SEQ ID NO:25)
HC-FR2 WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 WGQGTLVTVSA (SEQ ID NO:28).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIKR (SEQ ID NO:32).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment the minimal effector function results from an “effector-less Fc mutation” or
aglycosylation. In still a further embodiment, the effector-less Fc mutation is an N297A or
D265A/N297A substitution in the constant region.
In a still further embodiment, described is an isolated anti-PD-L1 antibody
comprising a heavy chain and a light chain variable region sequence, wherein:
(a) the heavy chain sequence has at least 85% sequence identity to the heavy
chain sequence:
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSA (SEQ ID NO:23),
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSSASTK (SEQ ID NO:40), or
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSS (SEQ ID NO:41), or
(b) the light chain sequences has at least 85% sequence identity to the light chain
sequence:
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKR (SEQ ID
NO:24).
In a specific embodiment, the sequence identity is 86%, 87%, 88%, 89%, 90%,
91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100%. In another embodiment, the
heavy chain variable region comprises one or more framework sequences juxtaposed between
the HVRs as: (HC-FR1)-(HVR-H1)-(HC-FR2)-(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4),
and the light chain variable regions comprises one or more framework sequences juxtaposed
between the HVRs as: (LC-FR1)-(HVR-L1)-(LC-FR2)-(HVR-L2)-(LC-FR3)-(HVR-L3)-
(LC-FR4). In yet another embodiment, the framework sequences are derived from human
consensus framework sequences. In a further embodiment, the heavy chain framework
sequences are derived from a Kabat subgroup I, II, or III sequence. In a still further
embodiment, the heavy chain framework sequence is a VH subgroup III consensus
framework. In a still further embodiment, one or more of the heavy chain framework
sequences is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAAS (SEQ ID NO:25)
HC-FR2 WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 WGQGTLVTVSA (SEQ ID NO:28).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIKR (SEQ ID NO:32).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment, the minimal effector function results from production in prokaryotic cells. In a
still further specific embodiment the minimal effector function results from an “effector-less
Fc mutation” or aglycosylation. In still a further embodiment, the effector-less Fc mutation is
an N297A or D265A/N297A substitution in the constant region.
In a still further embodiment, described herein are compositions comprising any of
the above described anti-PD-L1 antibodies in combination with at least one
pharmaceutically-acceptable carrier.
In a still further embodiment, described is an isolated nucleic acid encoding a light
chain or a heavy chain variable region sequence of an anti-PD-L1 antibody, wherein:
(a) the heavy chain further comprises and HVR-H1, HVR-H2 and an HVR-H3
sequence having at least 85% sequence identity to GFTFSDSWIH (SEQ ID NO:17),
AWISPYGGSTYYADSVKG (SEQ ID NO:18) and RHWPGGFDY (SEQ ID NO:19),
respectively, and
(b) the light chain further comprises an HVR-L1, HVR-L2 and an HVR-L3
sequence having at least 85% sequence identity to RASQDVSTAVA (SEQ ID NO:20),
SASFLYS (SEQ ID NO:21) and QQYLYHPAT (SEQ ID NO:22), respectively.
In a specific embodiment, the sequence identity is 86%, 87%, 88%, 89%, 90%,
91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100%. In embodiments, the heavy
chain variable region comprises one or more framework sequences juxtaposed between the
HVRs as: (HC-FR1)-(HVR-H1)-(HC-FR2)-(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4), and
the light chain variable regions comprises one or more framework sequences juxtaposed
between the HVRs as: (LC-FR1)-(HVR-L1)-(LC-FR2)-(HVR-L2)-(LC-FR3)-(HVR-L3)-
(LC-FR4). In yet another embodiment, the framework sequences are derived from human
consensus framework sequences. In a further embodiment, the heavy chain framework
sequences are derived from a Kabat subgroup I, II, or III sequence. In a still further
embodiment, the heavy chain framework sequence is a VH subgroup III consensus
framework. In a still further embodiment, one or more of the heavy chain framework
sequences is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAAS (SEQ ID NO:25)
HC-FR2 WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 WGQGTLVTVSA (SEQ ID NO:28).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIKR (SEQ ID NO:32).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment, the minimal effector function results from production in prokaryotic cells. In a
still further specific embodiment the minimal effector function results from an “effector-less
Fc mutation” or aglycosylation. In still a further embodiment, the effector-less Fc mutation is
an N297A or D265A/N297A substitution in the constant region.
In another further embodiment, described is an isolated anti-PDL1 antibody
comprising a heavy chain and a light chain variable region sequence, wherein:
(a) the heavy chain sequence has at least 85% sequence identity to the heavy
chain
sequence:EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVA
WISPYGGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGF
DYWGQGTLVTVSS (SEQ ID NO:41), or
(b) the light chain sequences has at least 85% sequence identity to the light chain
sequence:
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKR (SEQ ID
NO:24).
In a specific embodiment, the sequence identity is 86%, 87%, 88%, 89%, 90%,
91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100%. In another embodiment, the
heavy chain variable region comprises one or more framework sequences juxtaposed between
the HVRs as: (HC-FR1)-(HVR-H1)-(HC-FR2)-(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4),
and the light chain variable regions comprises one or more framework sequences juxtaposed
between the HVRs as: (LC-FR1)-(HVR-L1)-(LC-FR2)-(HVR-L2)-(LC-FR3)-(HVR-L3)-
(LC-FR4). In yet another embodiment, the framework sequences are derived from human
consensus framework sequences. In a further embodiment, the heavy chain framework
sequences are derived from a Kabat subgroup I, II, or III sequence. In a still further
embodiment, the heavy chain framework sequence is a VH subgroup III consensus
framework. In a still further embodiment, one or more of the heavy chain framework
sequences is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAAS (SEQ ID NO:25)
HC-FR2 WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 WGQGTLVTVSS (SEQ ID NO:42).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIKR (SEQ ID NO:32).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment, the minimal effector function results from production in prokaryotic cells. In a
still further specific embodiment the minimal effector function results from an “effector-less
Fc mutation” or aglycosylation. In still a further embodiment, the effector-less Fc mutation is
an N297A or D265A/N297A substitution in the constant region.
In a further embodiment, the heavy chain variable region comprises one or more
framework sequences juxtaposed between the HVRs as: (HC-FR1)-(HVR-H1)-(HC-FR2)-
(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4), and the light chain variable regions comprises
one or more framework sequences juxtaposed between the HVRs as: (LC-FR1)-(HVR-L1)-
(LC-FR2)-(HVR-L2)-(LC-FR3)-(HVR-L3)-(LC-FR4). In a still further embodiment, the
framework sequences are derived from human consensus framework sequences. In a still
further embodiment, the heavy chain framework sequences are derived from a Kabat
subgroup I, II, or III sequence. In a still further embodiment, the heavy chain framework
sequence is a VH subgroup III consensus framework. In a still further embodiment, one or
more of the heavy chain framework sequences is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAASGFTFS (SEQ ID NO:43)
HC-FR2 WVRQAPGKGLEWVA (SEQ ID NO:44)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 WGQGTLVTVSS (SEQ ID NO:45).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIK (SEQ ID NO:46).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment the minimal effector function results from an “effector-less Fc mutation” or
aglycosylation. In still a further embodiment, the effector-less Fc mutation is an N297A or
D265A/N297A substitution in the constant region.
In yet another embodiment, described is an anti-PDL1 antibody comprising a heavy
chain and a light chain variable region sequence, wherein:
(d) the heavy chain further comprises and HVR-H1, HVR-H2 and an HVR-H3
sequence having at least 85% sequence identity to GFTFSDSWIH (SEQ ID
NO:17), AWISPYGGSTYYADSVKG (SEQ ID NO:18) and RHWPGGFDY
(SEQ ID NO:19), respectively, or
(e) the light chain further comprises an HVR-L1, HVR-L2 and an HVR-L3
sequence having at least 85% sequence identity to RASQDVSTAVA (SEQ ID
NO:20), SASFLYS (SEQ ID NO:21) and QQYLYHPAT (SEQ ID NO:22),
respectively.
In a specific embodiment, the sequence identity is 86%, 87%, 88%, 89%, 90%,
91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100%. In another embodiment, the
heavy chain variable region comprises one or more framework sequences juxtaposed between
the HVRs as: (HC-FR1)-(HVR-H1)-(HC-FR2)-(HVR-H2)-(HC-FR3)-(HVR-H3)-(HC-FR4),
and the light chain variable regions comprises one or more framework sequences juxtaposed
between the HVRs as: (LC-FR1)-(HVR-L1)-(LC-FR2)-(HVR-L2)-(LC-FR3)-(HVR-L3)-
(LC-FR4). In yet another embodiment, the framework sequences are derived from human
consensus framework sequences. In a still further embodiment, the heavy chain framework
sequences are derived from a Kabat subgroup I, II, or III sequence. In a still further
embodiment, the heavy chain framework sequence is a VH subgroup III consensus
framework. In a still further embodiment, one or more of the heavy chain framework
sequences is the following:
HC-FR1 EVQLVESGGGLVQPGGSLRLSCAAS (SEQ ID NO:25)
HC-FR2 WVRQAPGKGLEWV (SEQ ID NO:26)
HC-FR3 RFTISADTSKNTAYLQMNSLRAEDTAVYYCAR (SEQ ID NO:27)
HC-FR4 WGQGTLVTVSSASTK (SEQ ID NO:47).
In a still further embodiment, the light chain framework sequences are derived from
a Kabat kappa I, II, II or IV subgroup sequence. In a still further embodiment, the light chain
framework sequences are VL kappa I consensus framework. In a still further embodiment,
one or more of the light chain framework sequences is the following:
LC-FR1 DIQMTQSPSSLSASVGDRVTITC (SEQ ID NO:29)
LC-FR2 WYQQKPGKAPKLLIY (SEQ ID NO:30)
LC-FR3 GVPSRFSGSGSGTDFTLTISSLQPEDFATYYC (SEQ ID NO:31)
LC-FR4 FGQGTKVEIKR (SEQ ID NO:32).
In a still further specific embodiment, the antibody further comprises a human or
murine constant region. In a still further embodiment, the human constant region is selected
from the group consisting of IgG1, IgG2, IgG2, IgG3, IgG4. In a still further specific
embodiment, the human constant region is IgG1. In a still further embodiment, the murine
constant region is selected from the group consisting of IgG1, IgG2A, IgG2B, IgG3. In a still
further embodiment, the murine constant region if IgG2A. In a still further specific
embodiment, the antibody has reduced or minimal effector function. In a still further specific
embodiment the minimal effector function results from an “effector-less Fc mutation” or
aglycosylation. In still a further embodiment, the effector-less Fc mutation is an N297A or
D265A/N297A substitution in the constant region.
In a still further embodiment, described is an isolated anti-PDL1 antibody
comprising a heavy chain and a light chain variable region sequence, wherein:
(a) the heavy chain sequence has at least 85% sequence identity to the heavy
chain sequence:
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSSASTK (SEQ ID NO:40), or
(b) the light chain sequences has at least 85% sequence identity to the light chain
sequence:
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKR (SEQ ID
NO:24).
In some embodiments, described is an isolated anti-PDL1 antibody comprising a
heavy chain and a light chain variable region sequence, wherein the light chain variable
region sequence has at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at
least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at
least 97%, at least 98%, or at least 99% sequence identity to the amino acid sequence of SEQ
ID NO:24. In some embodiments, described is an isolated anti-PDL1 antibody comprising a
heavy chain and a light chain variable region sequence, wherein the heavy chain variable
region sequence has at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at
least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at
least 97%, at least 98%, or at least 99% sequence identity to the amino acid sequence of SEQ
ID NO:40. In some embodiments, described is an isolated anti-PDL1 antibody comprising a
heavy chain and a light chain variable region sequence, wherein the light chain variable
region sequence has at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at
least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at
least 97%, at least 98%, or at least 99% sequence identity to the amino acid sequence of SEQ
ID NO:24 and the heavy chain variable region sequence has at least 85%, at least 86%, at
least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at
least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence
identity to the amino acid sequence of SEQ ID NO:40.
In a still further embodiment, described is an isolated anti-PDL1 antibody
comprising a heavy chain and a light chain sequence, wherein:
(a) the heavy chain sequence has at least 85% sequence identity to the heavy
chain sequence:
EVQLVESGGGLVQPGGSLRLSCAASGFTFSDSWIHWVRQAPGKGLEWVAWISPYGG
STYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRHWPGGFDYWGQG
TLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV
HTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV
EVHNAKTKPREEQYASTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG (SEQ ID
NO:48), or
(b) the light chain sequences has at least 85% sequence identity to the light chain
sequence:
DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSG
VPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLYHPATFGQGTKVEIKRTVAAPSV
FIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDST
YSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC (SEQ ID NO:49).
In some embodiments, described is an isolated anti-PDL1 antibody comprising a
heavy chain and a light chain sequence, wherein the light chain sequence has at least 85%, at
least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at
least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99%
sequence identity to the amino acid sequence of SEQ ID NO:49. In some embodiments,
described is an isolated anti-PDL1 antibody comprising a heavy chain and a light chain
sequence, wherein the heavy chain sequence has at least 85%, at least 86%, at least 87%, at
least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at
least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to the
amino acid sequence of SEQ ID NO:48. In some embodiments, described is an isolated anti-
PDL1 antibody comprising a heavy chain and a light chain sequence, wherein the light chain
sequence has at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%,
at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%,
at least 98%, or at least 99% sequence identity to the amino acid sequence of SEQ ID NO:49
and the heavy chain sequence has at least 85%, at least 86%, at least 87%, at least 88%, at
least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at
least 96%, at least 97%, at least 98%, or at least 99% sequence identity to the amino acid
sequence of SEQ ID NO:48.
In a still further embodiment, the nucleic acid further comprises a vector suitable for
expression of the nucleic acid encoding any of the previously described anti-PD-L1
antibodies. In a still further specific embodiment, the vector further comprises a host cell
suitable for expression of the nucleic acid. In a still further specific embodiment, the host cell
is a eukaryotic cell or a prokaryotic cell. In a still further specific embodiment, the
eukaryotic cell is a mammalian cell, such as Chinese Hamster Ovary (CHO).
The anti-PD-L1 antibody or antigen binding fragment thereof, may be made using
methods known in the art, for example, by a process comprising culturing a host cell
containing nucleic acid encoding any of the previously described anti-PD-L1 antibodies or
antigen-binding fragment in a form suitable for expression, under conditions suitable to
produce such antibody or fragment, and recovering the antibody or fragment.
In a still further embodiment, described herein is a composition comprising an anti-
PD-L1 antibody or antigen binding fragment thereof as described herein and at least one
pharmaceutically acceptable carrier.
Agents that decreases or inhibits TIGIT expression and/or activity
Described herein is a method for treatment or delaying progression of cancer in an
individual comprising administering to the individual an effective amount of a PD-1 axis
binding antagonist in combination with an agent that decreases or inhibits TIGIT expression
and/or activity. Described herein is also a method for reducing or inhibiting cancer relapse or
cancer progression in an individual comprising administering to the individual an effective
amount of a PD-1 axis binding antagonist in combination with an agent that decreases or
inhibits TIGIT expression and/or activity. Described herein is also a method for treating or
delaying progression of an immune related disease in an individual comprising administering
to the individual an effective amount of a PD-1 axis binding antagonist in combination with
an agent that decreases or inhibits TIGIT expression and/or activity. Described herein is also
a method for reducing or inhibiting progression of an immune related disease in an individual
comprising administering to the individual an effective amount of a PD-1 axis binding
antagonist in combination with an agent that decreases or inhibits TIGIT expression and/or
activity. Described herein is also a method for increasing, enhancing or stimulating an
immune response or function in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist in combination with an agent that
decreases or inhibits TIGIT expression and/or activity. Described herein is also a method for
increasing, enhancing or stimulating an immune response or function in an individual
comprising administering to the individual an effective amount of an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that decreases or inhibits one or more
additional immune co-inhibitory receptors. Described herein is also a method for increasing,
enhancing or stimulating an immune response or function in an individual comprising
administering to the individual an effective amount of an agent that decreases or inhibits
TIGIT expression and/or activity and an agent that increases or activates one or more
additional immune co-stimulatory receptors. For example, agent that decreases or inhibits
TIGIT expression and/or activity includes an antagonist of TIGIT expression and/or activity,
an antagonist of PVR expression and/or activity, an agent that inhibits and/or blocks the
interaction of TIGIT with PVR, an agent that inhibits and/or blocks the interaction of TIGIT
with PVRL2, an agent that inhibits and/or blocks the interaction of TIGIT with PVRL3, an
agent that inhibits and/or blocks the intracellular signaling mediated by TIGIT binding to
PVR, an agent that inhibits and/or blocks the intracellular signaling mediated by TIGIT
binding to PVRL2, an agent that inhibits and/or blocks the intracellular signaling mediated by
TIGIT binding to PVRL3, and combinations thereof.
In some embodiments, the antagonist of TIGIT expression and/or activity includes a
small molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an
aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the antagonist of PVR expression and/or activity includes a
small molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an
aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVR includes a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVRL2 includes a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT
with PVRL3 includes a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVR includes a small molecule inhibitor, an
inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVRL2 includes a small molecule inhibitor, an
inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVRL3 includes a small molecule inhibitor, an
inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide.
In some embodiments, the antagonist of TIGIT expression and/or activity is an
inhibitory nucleic acid selected from an antisense polynucleotide, an interfering RNA, a
catalytic RNA, and an RNA-DNA chimera.
In some embodiments, the antagonist of TIGIT expression and/or activity is an anti-
TIGIT antibody or antigen-binding fragment thereof.
The anti-TIGIT antibodies useful according to the description, including
compositions containing such antibodies, such as those described in , may
be used in combination with PD-1 axis binding antagonists.
Anti-TIGIT Antibodies
Described herein are anti-TIGIT antibodies. Exemplary antibodies include
polyclonal, monoclonal, humanized, bispecific, and heteroconjugate antibodies. It will be
understood by one of ordinary skill in the art that described herein are antibodies against
other polypeptides (i.e., anti-PVR antibodies) and that any of the description herein drawn
specifically to the method of creation, production, varieties, use or other embodiments of
anti-TIGIT antibodies will also be applicable to antibodies specific for other non-TIGIT
polypeptides.
Polyclonal Antibodies
The anti-TIGIT antibodies may comprise polyclonal antibodies. Methods of
preparing polyclonal antibodies are known to the skilled artisan. Polyclonal antibodies can
be raised in a mammal, for example, by one or more injections of an immunizing agent and,
if desired, an adjuvant. Typically, the immunizing agent and/or adjuvant will be injected in
the mammal by multiple subcutaneous or intraperitoneal injections. The immunizing agent
may include the TIGIT polypeptide or a fusion protein thereof. It may be useful to conjugate
the immunizing agent to a protein known to be immunogenic in the mammal being
immunized. Examples of such immunogenic proteins include but are not limited to keyhole
limpet hemocyanin, serum albumin, bovine thyroglobulin, and soybean trypsin inhibitor.
Examples of adjuvants which may be employed include Freund's complete adjuvant and
MPL-TDM adjuvant (monophosphoryl Lipid A, synthetic trehalose dicorynomycolate). The
immunization protocol may be selected by one skilled in the art without undue
experimentation.
Monoclonal Antibodies
The anti-TIGIT antibodies may, alternatively, be monoclonal antibodies.
Monoclonal antibodies may be prepared using hybridoma methods, such as those described
by Kohler and Milstein, Nature, 256:495 (1975). In a hybridoma method, a mouse, hamster,
or other appropriate host animal, is typically immunized with an immunizing agent to elicit
lymphocytes that produce or are capable of producing antibodies that will specifically bind to
the immunizing agent. Alternatively, the lymphocytes may be immunized in vitro.
The immunizing agent will typically include the TIGIT polypeptide or a fusion
protein thereof. Generally, either peripheral blood lymphocytes ("PBLs") are used if cells of
human origin are desired, or spleen cells or lymph node cells are used if non-human
mammalian sources are desired. The lymphocytes are then fused with an immortalized cell
line using a suitable fusing agent, such as polyethylene glycol, to form a hybridoma cell
[Goding, Monoclonal Antibodies: Principles and Practice, Academic Press, (1986) pp. 59-
103]. Immortalized cell lines are usually transformed mammalian cells, particularly
myeloma cells of rodent, bovine and human origin. Usually, rat or mouse myeloma cell lines
are employed. The hybridoma cells may be cultured in a suitable culture medium that
preferably contains one or more substances that inhibit the growth or survival of the unfused,
immortalized cells. For example, if the parental cells lack the enzyme hypoxanthine guanine
phosphoribosyl transferase (HGPRT or HPRT), the culture medium for the hybridomas
typically will include hypoxanthine, aminopterin, and thymidine ("HAT medium"), which
substances prevent the growth of HGPRT-deficient cells.
Preferred immortalized cell lines are those that fuse efficiently, support stable high
level expression of antibody by the selected antibody-producing cells, and are sensitive to a
medium such as HAT medium. More preferred immortalized cell lines are murine myeloma
lines, which can be obtained, for instance, from the Salk Institute Cell Distribution Center,
San Diego, California and the American Type Culture Collection, Manassas, Virginia.
Human myeloma and mouse-human heteromyeloma cell lines also have been described for
the production of human monoclonal antibodies [Kozbor, J. Immunol., 133:3001 (1984);
Brodeur et al., Monoclonal Antibody Production Techniques and Applications, Marcel
Dekker, Inc., New York, (1987) pp. 51-63].
The culture medium in which the hybridoma cells are cultured can then be assayed
for the presence of monoclonal antibodies directed against the polypeptide. Preferably, the
binding specificity of monoclonal antibodies produced by the hybridoma cells is determined
by immunoprecipitation or by an in vitro binding assay, such as radioimmunoassay (RIA) or
enzyme-linked immunoabsorbent assay (ELISA). Such techniques and assays are known in
the art. The binding affinity of the monoclonal antibody can, for example, be determined by
the Scatchard analysis of Munson and Pollard, Anal. Biochem., 107:220 (1980).
After the desired hybridoma cells are identified, the clones may be subcloned by
limiting dilution procedures and grown by standard methods [Goding, supra]. Suitable
culture media for this purpose include, for example, Dulbecco's Modified Eagle's Medium
and RPMI-1640 medium. Alternatively, the hybridoma cells may be grown in vivo as ascites
in a mammal.
The monoclonal antibodies secreted by the subclones may be isolated or purified
from the culture medium or ascites fluid by conventional immunoglobulin purification
procedures such as, for example, protein A-Sepharose, hydroxylapatite chromatography, gel
electrophoresis, dialysis, or affinity chromatography.
The monoclonal antibodies may also be made by recombinant DNA methods, such
as those described in U.S. Patent No. 4,816,567. DNA encoding the monoclonal antibodies
of the description can be readily isolated and sequenced using conventional procedures (e.g.,
by using oligonucleotide probes that are capable of binding specifically to genes encoding the
heavy and light chains of murine antibodies). The hybridoma cells of the description serve as
a preferred source of such DNA. Once isolated, the DNA may be placed into expression
vectors, which are then transfected into host cells such as simian COS cells, Chinese hamster
ovary (CHO) cells, or myeloma cells that do not otherwise produce immunoglobulin protein,
to obtain the synthesis of monoclonal antibodies in the recombinant host cells. The DNA
also may be modified, for example, by substituting the coding sequence for human heavy and
light chain constant domains in place of the homologous murine sequences [U.S. Patent No.
4,816,567; Morrison et al., supra] or by covalently joining to the immunoglobulin coding
sequence all or part of the coding sequence for a non-immunoglobulin polypeptide. Such a
non-immunoglobulin polypeptide can be substituted for the constant domains of an antibody
of the description, or can be substituted for the variable domains of one antigen-combining
site of an antibody of the description to create a chimeric bivalent antibody.
The antibodies may be monovalent antibodies. Methods for preparing monovalent
antibodies are well known in the art. For example, one method involves recombinant
expression of immunoglobulin light chain and modified heavy chain. The heavy chain is
truncated generally at any point in the Fc region so as to prevent heavy chain crosslinking.
Alternatively, the relevant cysteine residues are substituted with another amino acid residue
or are deleted so as to prevent crosslinking.
In vitro methods are also suitable for preparing monovalent antibodies. Digestion
of antibodies to produce fragments thereof, particularly, Fab fragments, can be accomplished
using routine techniques known in the art.
Human and Humanized Antibodies
The anti-TIGIT antibodies of the description may further comprise humanized
antibodies or human antibodies. Humanized forms of non-human (e.g., murine) antibodies
are chimeric immunoglobulins, immunoglobulin chains or fragments thereof (such as Fv,
Fab, Fab', F(ab') or other antigen-binding subsequences of antibodies) which contain
minimal sequence derived from non-human immunoglobulin. Humanized antibodies include
human immunoglobulins (recipient antibody) in which residues from a complementary
determining region (CDR) of the recipient are replaced by residues from a CDR of a non-
human species (donor antibody) such as mouse, rat or rabbit having the desired specificity,
affinity and capacity. In some instances, Fv framework residues of the human
immunoglobulin are replaced by corresponding non-human residues. Humanized antibodies
may also comprise residues which are found neither in the recipient antibody nor in the
imported CDR or framework sequences. In general, the humanized antibody will comprise
substantially all of at least one, and typically two, variable domains, in which all or
substantially all of the CDR regions correspond to those of a non-human immunoglobulin
and all or substantially all of the FR regions are those of a human immunoglobulin consensus
sequence. The humanized antibody optimally also will comprise at least a portion of an
immunoglobulin constant region (Fc), typically that of a human immunoglobulin [Jones et
al., Nature, 321:522-525 (1986); Riechmann et al., Nature, 332:323-329 (1988); and Presta,
Curr. Op. Struct. Biol., 2:593-596 (1992)].
Methods for humanizing non-human antibodies are well known in the art.
Generally, a humanized antibody has one or more amino acid residues introduced into it from
a source which is non-human. These non-human amino acid residues are often referred to as
"import" residues, which are typically taken from an "import" variable domain.
Humanization can be essentially performed following the method of Winter and co-workers
[Jones et al., Nature, 321:522-525 (1986); Riechmann et al., Nature, 332:323-327 (1988);
Verhoeyen et al., Science, 239:1534-1536 (1988)], by substituting rodent CDRs or CDR
sequences for the corresponding sequences of a human antibody. Accordingly, such
"humanized" antibodies are chimeric antibodies (U.S. Patent No. 4,816,567), wherein
substantially less than an intact human variable domain has been substituted by the
corresponding sequence from a non-human species. In practice, humanized antibodies are
typically human antibodies in which some CDR residues and possibly some FR residues are
substituted by residues from analogous sites in rodent antibodies.
Human antibodies can also be produced using various techniques known in the art,
including phage display libraries [Hoogenboom and Winter, J. Mol. Biol., 227:381 (1991);
Marks et al., J. Mol. Biol., 222:581 (1991)]. The techniques of Cole et al. and Boerner et al.
are also available for the preparation of human monoclonal antibodies (Cole et al.,
Monoclonal Antibodies and Cancer Therapy, Alan R. Liss, p. 77 (1985) and Boerner et al., J.
Immunol., 147(1):86-95 (1991)]. Similarly, human antibodies can be made by introducing of
human immunoglobulin loci into transgenic animals, e.g., mice in which the endogenous
immunoglobulin genes have been partially or completely inactivated. Upon challenge,
human antibody production is observed, which closely resembles that seen in humans in all
respects, including gene rearrangement, assembly, and antibody repertoire. This approach is
described, for example, in U.S. Patent Nos. 5,545,807; 5,545,806; 5,569,825; 5,625,126;
,633,425; 5,661,016, and in the following scientific publications: Marks et al.,
Bio/Technology 10, 779-783 (1992); Lonberg et al., Nature 368 856-859 (1994); Morrison,
Nature 368, 812-13 (1994); Fishwild et al., Nature Biotechnology 14, 845-51 (1996);
Neuberger, Nature Biotechnology 14, 826 (1996); Lonberg and Huszar, Intern. Rev.
Immunol. 13 65-93 (1995).
The antibodies may also be affinity matured using known selection and/or
mutagenesis methods as described above. Preferred affinity matured antibodies have an
affinity which is five times, more preferably 10 times, even more preferably 20 or 30 times
greater than the starting antibody (generally murine, humanized or human) from which the
matured antibody is prepared.
Bispecific Antibodies
Bispecific antibodies are monoclonal, preferably human or humanized, antibodies
that have binding specificities for at least two different antigens. In the present case, one of
the binding specificities is for TIGIT, the other one is for any other antigen, and preferably
for a cell-surface protein or receptor or receptor subunit.
Methods for making bispecific antibodies are known in the art. Traditionally, the
recombinant production of bispecific antibodies is based on the co-expression of two
immunoglobulin heavy-chain/light-chain pairs, where the two heavy chains have different
specificities [Milstein and Cuello, Nature, 305:537-539 (1983)]. Because of the random
assortment of immunoglobulin heavy and light chains, these hybridomas (quadromas)
produce a potential mixture of ten different antibody molecules, of which only one has the
correct bispecific structure. The purification of the correct molecule is usually accomplished
by affinity chromatography steps. Similar procedures are disclosed in WO 93/08829,
published 13 May 1993, and in Traunecker et al., EMBO J., 10:3655-3659 (1991).
Antibody variable domains with the desired binding specificities (antibody-antigen
combining sites) can be fused to immunoglobulin constant domain sequences. The fusion
preferably is with an immunoglobulin heavy-chain constant domain, comprising at least part
of the hinge, CH2, and CH3 regions. It is preferred to have the first heavy-chain constant
region (CH1) containing the site necessary for light-chain binding present in at least one of
the fusions. DNAs encoding the immunoglobulin heavy-chain fusions and, if desired, the
immunoglobulin light chain, are inserted into separate expression vectors, and are co-
transfected into a suitable host organism. For further details of generating bispecific
antibodies see, for example, Suresh et al., Methods in Enzymology, 121:210 (1986).
According to another approach described in WO 96/27011, the interface between a
pair of antibody molecules can be engineered to maximize the percentage of heterodimers
which are recovered from recombinant cell culture. The preferred interface comprises at least
a part of the CH3 region of an antibody constant domain. In this method, one or more small
amino acid side chains from the interface of the first antibody molecule are replaced with
larger side chains (e.g. tyrosine or tryptophan). Compensatory “cavities” of identical or
similar size to the large side chain(s) are created on the interface of the second antibody
molecule by replacing large amino acid side chains with smaller ones (e.g. alanine or
threonine). This provides a mechanism for increasing the yield of the heterodimer over other
unwanted end-products such as homodimers.
Bispecific antibodies can be prepared as full length antibodies or antibody
fragments (e.g. F(ab’) bispecific antibodies). Techniques for generating bispecific
antibodies from antibody fragments have been described in the literature. For example,
bispecific antibodies can be prepared can be prepared using chemical linkage. Brennan et al.,
Science 229:81 (1985) describe a procedure wherein intact antibodies are proteolytically
cleaved to generate F(ab’) fragments. These fragments are reduced in the presence of the
dithiol complexing agent sodium arsenite to stabilize vicinal dithiols and prevent
intermolecular disulfide formation. The Fab’ fragments generated are then converted to
thionitrobenzoate (TNB) derivatives. One of the Fab’-TNB derivatives is then reconverted to
the Fab’-thiol by reduction with mercaptoethylamine and is mixed with an equimolar amount
of the other Fab’-TNB derivative to form the bispecific antibody. The bispecific antibodies
produced can be used as agents for the selective immobilization of enzymes.
Fab’ fragments may be directly recovered from E. coli and chemically coupled to
form bispecific antibodies. Shalaby et al., J. Exp. Med. 175:217-225 (1992) describe the
production of a fully humanized bispecific antibody F(ab’) molecule. Each Fab’ fragment
was separately secreted from E. coli and subjected to directed chemical coupling in vitro to
form the bispecific antibody. The bispecific antibody thus formed was able to bind to cells
overexpressing the ErbB2 receptor and normal human T cells, as well as trigger the lytic
activity of human cytotoxic lymphocytes against human breast tumor targets.
Various technique for making and isolating bispecific antibody fragments directly
from recombinant cell culture have also been described. For example, bispecific antibodies
have been produced using leucine zippers. Kostelny et al., J. Immunol. 148(5):1547-1553
(1992). The leucine zipper peptides from the Fos and Jun proteins were linked to the Fab’
portions of two different antibodies by gene fusion. The antibody homodimers were reduced
at the hinge region to form monomers and then re-oxidized to form the antibody
heterodimers. This method can also be utilized for the production of antibody homodimers.
The “diabody” technology described by Hollinger et al., Proc. Natl. Acad. Sci. USA
90:6444-6448 (1993) has provided an alternative mechanism for making bispecific antibody
fragments. The fragments comprise a heavy-chain variable domain (V ) connected to a
light-chain variable domain (V ) by a linker which is too short to allow pairing between the
two domains on the same chain. Accordingly, the V and V domains of one fragment are
forced to pair with the complementary V and V domains of another fragment, thereby
forming two antigen-binding sites. Another strategy for making bispecific antibody
fragments by the use of single-chain Fv (sFv) dimers has also been reported. See, Gruber et
al., J. Immunol. 152:5368 (1994).
Antibodies with more than two valencies are contemplated. As one nonlimiting
example, trispecific antibodies can be prepared. See, e.g., Tutt et al., J. Immunol. 147:60
(1991).
Exemplary bispecific antibodies may bind to two different epitopes on a given
TIGIT polypeptide herein. Alternatively, an anti-TIGIT polypeptide arm may be combined
with an arm which binds to a triggering molecule on a leukocyte such as a T-cell receptor
molecule (e.g. CD2, CD3, CD28, or B7), or Fc receptors for IgG (FcγR), such as FcγRI
(CD64), FcγRII (CD32) and FcγRIII (CD16) so as to focus cellular defense mechanisms to
the cell expressing the particular TIGIT polypeptide. Bispecific antibodies may also be used
to localize cytotoxic agents to cells which express a particular TIGIT polypeptide. These
antibodies possess a TIGIT-binding arm and an arm which binds a cytotoxic agent or a
radionuclide chelator, such as EOTUBE, DPTA, DOTA, or TETA. Another bispecific
antibody of interest binds the TIGIT polypeptide and further binds tissue factor (TF).
Heteroconjugate Antibodies
Heteroconjugate antibodies are also within the scope of the present description.
Heteroconjugate antibodies are composed of two covalently joined antibodies. Such
antibodies have, for example, been proposed to target immune system cells to unwanted cells
[U.S. Patent No. 4,676,980], and for treatment of HIV infection [WO 91/00360; WO
92/200373; EP 03089]. It is contemplated that the antibodies may be prepared in vitro using
known methods in synthetic protein chemistry, including those involving crosslinking agents.
For example, immunotoxins may be constructed using a disulfide exchange reaction or by
forming a thioether bond. Examples of suitable reagents for this purpose include
iminothiolate and methylmercaptobutyrimidate and those disclosed, for example, in U.S.
Patent No. 4,676,980.
Effector Function Engineering
It may be desirable to modify the antibody of the description with respect to effector
function, so as to enhance, e.g., the effectiveness of the antibody in treating cancer. For
example, cysteine residue(s) may be introduced into the Fc region, thereby allowing
interchain disulfide bond formation in this region. The homodimeric antibody thus generated
may have improved internalization capability and/or increased complement-mediated cell
killing and antibody-dependent cellular cytotoxicity (ADCC). See Caron et al., J. Exp Med.,
176: 1191-1195 (1992) and Shopes, J. Immunol., 148: 2918-2922 (1992). Homodimeric
antibodies with enhanced anti-tumor activity may also be prepared using heterobifunctional
cross-linkers as described in Wolff et al. Cancer Research, 53: 2560-2565 (1993).
Alternatively, an antibody can be engineered that has dual Fc regions and may thereby have
enhanced complement lysis and ADCC capabilities. See Stevenson et al., Anti-Cancer Drug
Design, 3: 219-230 (1989).
In some embodiment, anti-TIGIT antibodies were generated which were hamster-
anti-mouse antibodies. Two antibodies, 10A7 and 1F4, also specifically bound to human
TIGIT. The amino acid sequences of the light and heavy chains of the 10A7 antibody were
determined using standard techniques. The light chain sequence of this antibody is:
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) and the heavy chain sequence of this antibody is:
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15), where the complementarity determining regions (CDRs) of
each chain are represented by bold text. Thus, CDR1 of the 10A7 light chain has the
sequence KSSQSLYYSGVKENLLA (SEQ ID NO:1), CDR2 of the 10A7 light chain has the
sequence ASIRFT (SEQ ID NO:2), and CDR3 of the 10A7 light chain has the sequence
QQGINNPLT (SEQ ID NO:3). CDR1 of the 10A7 heavy chain has the sequence
GFTFSSFTMH (SEQ ID NO:4), CDR2 of the 10A7 heavy chain has the sequence
FIRSGSGIVFYADAVRG (SEQ ID NO:5), and CDR3 of the 10A7 heavy chain has the
sequence RPLGHNTFDS (SEQ ID NO:6).
The amino acid sequences of the light and heavy chains of the 1F4 antibody were
also determined. The light chain sequence of this antibody is:
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14) and the heavy chain sequence of this antibody is:
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16), where the complementarity determining regions (CDRs) of
each chain are represented by bold text. Thus, CDR1 of the 1F4 light chain has the sequence
RSSQSLVNSYGNTFLS (SEQ ID NO:7), CDR2 of the 1F4 light chain has the sequence
GISNRFS (SEQ ID NO:8), and CDR3 of the 1F4 light chain has the sequence LQGTHQPPT
(SEQ ID NO:9). CDR1 of the 1F4 heavy chain has the sequence GYSFTGHLMN (SEQ ID
NO:10), CDR2 of the 1F4 heavy chain has the sequence LIIPYNGGTSYNQKFKG (SEQ ID
NO:11), and CDR3 of the 1F4 heavy chain has the sequence GLRGFYAMDY (SEQ ID
NO:12).
The nucleotide sequence encoding the 1F4 light chain was determined to be
GATGTTGTGTTGACTCAAACTCCACTCTCCCTGTCTGTCAGCTTTGGAGATCAAGT
TTCTATCTCTTGCAGGTCTAGTCAGAGTCTTGTAAACAGTTATGGGAACACCTTTT
TGTCTTGGTACCTGCACAAGCCTGGCCAGTCTCCACAGCTCCTCATCTTTGGGATT
TCCAACAGATTTTCTGGGGTGCCAGACAGGTTCAGTGGCAGTGGTTCAGGGACA
GATTTCACACTCAAGATCAGCACAATAAAGCCTGAGGACTTGGGAATGTATTACT
GCTTACAAGGTACGCATCAGCCTCCCACGTTCGGTCCTGGGACCAAGCTGGAGGT
GAAA (SEQ ID NO:38) and the nucleotide sequence encoding the 1F4 heavy chain was
determined to be
GAGGTCCAGCTGCAACAGTCTGGACCTGAGCTGGTGAAGCCTGGAACTTCAATG
AAGATATCCTGCAAGGCTTCTGGTTACTCATTCACTGGCCATCTTATGAACTGGG
TGAAGCAGAGCCATGGAAAGAACCTTGAGTGGATTGGACTTATTATTCCTTACAA
TGGTGGTACAAGCTATAACCAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGA
CAAGTCATCCAGCACAGCCTACATGGAGCTCCTCAGTCTGACTTCTGATGACTCT
GCAGTCTATTTCTGTTCAAGAGGCCTTAGGGGCTTCTATGCTATGGACTACTGGG
GTCAAGGAACCTCAGTCACCGTCTCCTCA (SEQ ID NO:39).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises at least one HVR comprising an amino acid sequence selected from the amino acid
sequences set forth in (1) KSSQSLYYSGVKENLLA (SEQ ID NO:1), ASIRFT (SEQ ID
NO:2), QQGINNPLT (SEQ ID NO:3), GFTFSSFTMH (SEQ ID NO:4),
FIRSGSGIVFYADAVRG (SEQ ID NO:5), and RPLGHNTFDS (SEQ ID NO:6), or (2)
RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS (SEQ ID NO:8), LQGTHQPPT (SEQ
ID NO:9), GYSFTGHLMN (SEQ ID NO:10), LIIPYNGGTSYNQKFKG (SEQ ID NO:11),
and GLRGFYAMDY (SEQ ID NO:12).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment
thereof, wherein the antibody light chain comprises the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment
thereof, wherein the antibody heavy chain comprises the amino acid sequence set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment
thereof, wherein the antibody light chain comprises the amino acid sequence set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14)and the antibody heavy chain comprises the amino acid sequence set forth in
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16).
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment
thereof, wherein the antibody is selected from a humanized antibody, a chimeric antibody, a
bispecific antibody, a heteroconjugate antibody, and an immunotoxin.
In some embodiments, the anti-TIGIT antibody or antigen-binding fragment thereof
comprises at least one HVR is at least 90% identical to an HVR set forth in any of (1)
KSSQSLYYSGVKENLLA (SEQ ID NO:1), ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ
ID NO:3), GFTFSSFTMH (SEQ ID NO:4), FIRSGSGIVFYADAVRG (SEQ ID NO:5), and
RPLGHNTFDS (SEQ ID NO:6), or (2) RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS
(SEQ ID NO:8), LQGTHQPPT (SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO:10),
LIIPYNGGTSYNQKFKG (SEQ ID NO:11), and GLRGFYAMDY (SEQ ID NO:12).
In some embodiments, the anti-TIGIT antibody or fragment thereof comprises the
light chain and/or heavy chain comprising amino acid sequences at least 90% identical to the
amino acid sequences set forth in
DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS
PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG
TKLEIKR (SEQ ID NO:13) or
DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR
FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ
ID NO:14), or
EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI
VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG
TLVTVSS (SEQ ID NO:15) or
EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG
TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG
TSVTVSS (SEQ ID NO:16), respectively.
Agents that modulate CD226 expression and/or activity
Described herein is a method of treating or delaying progression of cancer in an
individual comprising administering to the individual an effective amount of a PD-1 axis
binding antagonist and an agent that modulates the CD226 expression and/or activity.
Described herein is also a method for reducing or inhibiting cancer relapse or cancer
progression in an individual comprising administering to the individual an effective amount
of a PD-1 axis binding antagonist and an agent that modulates the CD226 expression and/or
activity. Described herein is also a method for treating or delaying progression of an immune
related disease in an individual comprising administering to the individual an effective
amount of a PD-1 axis binding antagonist and an agent that modulates the CD226 expression
and/or activity. Described herein is also a method for reducing or inhibiting progression of
an immune related disease in an individual comprising administering to the individual an
effective amount of a PD-1 axis binding antagonist and agent that modulates the CD226
expression and/or activity. Described herein is also a method of increasing, enhancing or
stimulating an immune response or function in an individual by administering to the
individual an effective amount of a PD-1 axis binding antagonist and an agent that modulates
the CD226 expression and/or activity.
For example, agents that modulate the CD226 expression and/or activity are agents
capable of increasing and/or stimulating CD226 expression and/or activity, increasing and/or
stimulating the interaction of CD226 with PVR, PVRL2, and/or PVRL3, and increasing
and/or stimulating the intracellular signaling mediated by CD226 binding to PVR, PVRL2,
and/or PVRL3. In some embodiments, agents capable of increasing and/or stimulating
CD226 expression and/or activity are agents that increase and/or stimulate CD226 expression
and/or activity. In some embodiments, agents capable of increasing and/or stimulating the
interaction of CD226 with PVR, PVRL2, and/or PVRL3 are agents that increase and/or
stimulate the interaction of CD226 with PVR, PVRL2, and/or PVRL3. In some
embodiments, agents capable of increasing and/or stimulating the intracellular signaling
mediated by CD226 binding to PVR, PVRL2, and/or PVRL3 are agents that increase and/or
stimulate the intracellular signaling mediated by CD226 binding to PVR, PVRL2, and/or
PVRL3.
In some embodiments, the agent that modulates the CD226 expression and/or
activity is selected from an agent that inhibits and/or blocks the interaction of CD226 with
TIGIT, an antagonist of TIGIT expression and/or activity, an antagonist of PVR expression
and/or activity, an agent that inhibits and/or blocks the interaction of TIGIT with PVR, an
agent that inhibits and/or blocks the interaction of TIGIT with PVRL2, an agent that inhibits
and/or blocks the interaction of TIGIT with PVRL3, an agent that inhibits and/or blocks the
intracellular signaling mediated by TIGIT binding to PVR, an agent that inhibits and/or
blocks the intracellular signaling mediated by TIGIT binding to PVRL2, an agent that inhibits
and/or blocks the intracellular signaling mediated by TIGIT binding to PVRL3, and
combinations thereof. In some embodiments, the agent that inhibits and/or blocks the
interaction of CD226 with TIGIT is selected from a small molecule inhibitor, an inhibitory
antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an
inhibitory polypeptide. In some embodiments, the agent that inhibits and/or blocks the
interaction of CD226 with TIGIT is an anti-TIGIT antibody or antigen-binding fragment
thereof. In some embodiments, the agent that inhibits and/or blocks the interaction of CD226
with TIGIT is an inhibitory nucleic acid selected from an antisense polynucleotide, an
interfering RNA, a catalytic RNA, and an RNA-DNA chimera.
In some embodiments, the antagonist of TIGIT expression and/or activity is a small
molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an aptamer,
an inhibitory nucleic acid, and an inhibitory polypeptide. In some embodiments, the
antagonist of TIGIT expression and/or activity is an anti-TIGIT antibody or antigen-binding
fragment thereof. In some embodiments, the antagonist of TIGIT expression and/or activity
is an inhibitory nucleic acid selected from an antisense polynucleotide, an interfering RNA, a
catalytic RNA, and an RNA-DNA chimera. In some embodiments, the antagonist of PVR
expression and/or activity is a small molecule inhibitor, an inhibitory antibody or antigen-
binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide. In some embodiments, the agent that inhibits and/or blocks the interaction of
TIGIT with PVR is a small molecule inhibitor, an inhibitory antibody or antigen-binding
fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In
some embodiments, the agent that inhibits and/or blocks the interaction of TIGIT with
PVRL2 is a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In some
embodiments, the agent that inhibits and/or blocks the interaction of TIGIT with PVRL3 is a
small molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an
aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In some embodiments, the
agent that inhibits and/or blocks the intracellular signaling mediated by TIGIT binding to
PVR is a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In some
embodiments, the agent that inhibits and/or blocks the intracellular signaling mediated by
TIGIT binding to PVRL2 is a small molecule inhibitor, an inhibitory antibody or antigen-
binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory
polypeptide. In some embodiments, the agent that inhibits and/or blocks the intracellular
signaling mediated by TIGIT binding to PVRL3 is a small molecule inhibitor, an inhibitory
antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic acid, and an
inhibitory polypeptide.
In some embodiments, the antagonist of TIGIT expression and/or activity includes a
small molecule inhibitor, an inhibitory antibody or antigen-binding fragment thereof, an
aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In some embodiments, the
antagonist of PVR expression and/or activity includes a small molecule inhibitor, an
inhibitory antibody or antigen-binding fragment thereof, an aptamer, an inhibitory nucleic
acid, and an inhibitory polypeptide. In some embodiments, the agent that inhibits the
intracellular signaling mediated by TIGIT binding to PVR is selected from the group
consisting of a small molecule inhibitor, an inhibitory antibody or antigen-binding fragment
thereof, an aptamer, an inhibitory nucleic acid, and an inhibitory polypeptide. In some
embodiments, the antagonist of TIGIT expression and/or activity is an anti-TIGIT antibody
or antigen-binding fragment thereof. In some embodiments, the antagonist of TIGIT
expression and/or activity is an inhibitory nucleic acid selected from an antisense
polynucleotide, an interfering RNA, a catalytic RNA, and an RNA-DNA chimera.
Combinations of T cell targets for immunregulatory antibody therapy
In addition to specific antigen recognition through the TCR, T-cell activation is
regulated through a balance of positive and negative signals provided by co-stimulatory
receptors. These surface proteins are typically members of either the TNF receptor or B7
superfamilies. Activating co-stimulatory receptors include CD226, CD28, OX40, GITR,
CD137, CD27, HVEM, MICA, ICOS, NKG2D, and 2B4. Inhibitory co-stimulatory receptors
include CTLA-4, PD-1, TIM-3, BTLA, VISTA, LAG-3, B7H4, and CD96. Agonistic
antibodies directed against activating co-stimulatory molecules and blocking antibodies
against negative co-stimulatory molecules may enhance T-cell stimulation to promote tumor
destruction.
Described herein is a method of increasing, enhancing or stimulating an immune
response or function in an individual by administering to the individual an effective amount
of an agent that decreases or inhibits TIGIT expression and/or activity and an agent that
decreases or inhibits one or more additional immune co-inhibitory receptors. In some
embodiments, the one or more additional immune co-inhibitory receptor is selected from PD-
1, CTLA-4, LAG3, TIM3, BTLA, VISTA, B7H4, and CD96. In some embodiments, the one
or more additional immune co-inhibitory receptor is selected from PD-1, CTLA-4, LAG3 and
TIM3.
Described herein is also a method of increasing, enhancing or stimulating an
immune response or function in an individual by administering to the individual an effective
amount of an agent that decreases or inhibits TIGIT expression and/or activity and an agent
that increases or activates one or more additional immune co-stimulatory receptor. In some
embodiments, the one or more additional immune co-stimulatory receptor is selected from
CD226, OX-40, CD28, CD27, CD137, HVEM, GITR, MICA, ICOS, NKG2D, and 2B4. In
some embodiments, the one or more additional immune co-stimulatory receptor is selected
from CD226, OX-40, CD27, CD137, HVEM and GITR. In some embodiments, the one or
more additional immune co-stimulatory receptor is selected from OX-40 and CD27.
IV Kits
In another embodiment, described is a kit comprising a PD-1 axis binding
antagonist and a package insert comprising instructions for using the PD-1 axis binding
antagonist in combination with an agent that decreases or inhibits TIGIT expression and/or
activity to treat or delay progression of cancer in an individual or for enhancing immune
function of an individual having cancer. Any of the PD-1 axis binding antagonists and/or
agents that decreases or inhibits TIGIT expression and/or activity described herein may be
included in the kit.
In another embodiment, described is a kit comprising a PD-1 axis binding
antagonist and an agent that decreases or inhibits TIGIT expression and/or activity, and a
package insert comprising instructions for using the PD-1 axis binding antagonist and the
agent that decreases or inhibits TIGIT expression and/or activity to treat or delay progression
of cancer in an individual or for enhancing immune function of an individual having cancer.
Any of the PD-1 axis binding antagonists and/or agents that decreases or inhibits TIGIT
expression and/or activity described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity in combination
with a PD-1 axis binding antagonist to treat or delay progression of cancer in an individual or
for enhancing immune function of an individual having cancer. Any of the PD-1 axis binding
antagonists and/or agents that decreases or inhibits TIGIT expression and/or activity
described herein may be included in the kit.
In another embodiment, described is a kit comprising a PD-1 axis binding
antagonist and a package insert comprising instructions for using the PD-1 axis binding
antagonist in combination with an agent that modulates the CD226 expression and/or activity
to treat or delay progression of cancer in an individual. Any of the PD-1 axis binding
antagonists and/or agents that modulate the CD226 expression and/or activity described
herein may be included in the kit.
In another embodiment, described is a kit comprising a PD-1 axis binding
antagonist and an agent that modulates the CD226 expression and/or activity, and a package
insert comprising instructions for using the PD-1 axis binding antagonist and the agent that
modulates the CD226 expression and/or activity to treat or delay progression of cancer in an
individual. Any of the PD-1 axis binding antagonists and/or agents that modulate the CD226
expression and/or activity described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that modulates the
CD226 expression and/or activity and a package insert comprising instructions for using the
agent modulates the CD226 expression and/or activity in combination with a PD-1 axis
binding antagonist to treat or delay progression of cancer in an individual. Any of the PD-1
axis binding antagonists and/or agents that modulate the CD226 expression and/or activity
described herein may be included in the kit.
In another embodiment, described is a kit comprising a PD-1 axis binding
antagonist and a package insert comprising instructions for using the PD-1 axis binding
antagonist in combination with an agent that modulates the CD226 expression and/or activity
to enhance immune function of an individual having cancer. Any of the PD-1 axis binding
antagonists and/or agents that modulate the CD226 expression and/or activity described
herein may be included in the kit.
In another embodiment, described is a kit comprising a PD-1 axis binding
antagonist and an agent that modulates the CD226 expression and/or activity, and a package
insert comprising instructions for using the PD-1 axis binding antagonist and the agent that
modulates the CD226 expression and/or activity to enhance immune function of an individual
having cancer. Any of the PD-1 axis binding antagonists and/or agents that modulate the
CD226 expression and/or activity described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent modulates the
CD226 expression and/or activity and a package insert comprising instructions for using the
agent that modulates the CD226 expression and/or activity in combination with a PD-1 axis
binding antagonist to enhance immune function of an individual having cancer. Any of the
PD-1 axis binding antagonists and/or agents that modulate the CD226 expression and/or
activity described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity in combination
with an agent that decreases or inhibits one or more additional immune co-inhibitory
receptors to treat or delay progression of cancer in an individual or to enhance immune
function of an individual having cancer. Any of the agents that decrease or inhibit TIGIT
expression and/or activity and/or agents that decrease or inhibit one or more additional
immune co-inhibitory receptors described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that decreases or inhibits one or more
additional immune co-inhibitory receptors, and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity and the agent that
decreases or inhibits one or more additional immune co-inhibitory receptors to treat or delay
progression of cancer in an individual or to enhance immune function of an individual having
cancer. Any of the agents that decrease or inhibit TIGIT expression and/or activity and/or
agents that decrease or inhibit one or more additional immune co-inhibitory receptors
described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that decreases or
inhibits one or more additional immune co-inhibitory receptors and a package insert
comprising instructions for using the agent that decreases or inhibits one or more additional
immune co-inhibitory receptors in combination with an agent that decreases or inhibits TIGIT
expression and/or activity to treat or delay progression of cancer in an individual or to
enhance immune function of an individual having cancer. Any of the agents that decrease or
inhibit TIGIT expression and/or activity and/or agents that decrease or inhibit one or more
additional immune co-inhibitory receptors described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity in combination
with an agent that increases or activates one or more additional immune co-stimulatory
receptors to treat or delay progression of cancer in an individual or to enhance immune
function of an individual having cancer. Any of the agents that decrease or inhibit TIGIT
expression and/or activity and/or agents that increase or activate one or more additional
immune co-stimulatory receptors described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that decreases or
inhibits TIGIT expression and/or activity and an agent that increases or activates one or more
additional immune co-stimulatory receptors, and a package insert comprising instructions for
using the agent that decreases or inhibits TIGIT expression and/or activity and the agent that
increases or activates one or more additional immune co-stimulatory receptors to treat or
delay progression of cancer in an individual or to enhance immune function of an individual
having cancer. Any of the agents that decrease or inhibit TIGIT expression and/or activity
and/or agents that increase or activate one or more additional immune co-stimulatory
receptors described herein may be included in the kit.
In another embodiment, described is a kit comprising an agent that increases or
activates one or more additional immune co-stimulatory receptors and a package insert
comprising instructions for using the agent that increases or activates one or more additional
immune co-stimulatory receptors in combination with an agent that decreases or inhibits
TIGIT expression and/or activity to treat or delay progression of cancer in an individual or to
enhance immune function of an individual having cancer. Any of the agents that decrease or
inhibit TIGIT expression and/or activity and/or agents that increase or activate one or more
additional immune co-stimulatory receptors described herein may be included in the kit.
In some embodiments, the kit comprises a container containing one or more of the
PD-1 axis binding antagonists and agents that decreases or inhibits TIGIT expression and/or
activity described herein. In some embodiments, the kit comprises a container containing one
or more of the PD-1 axis binding antagonists and agents that modulates CD226 expression
and/or activity described herein. In some embodiments, the kit comprises a container
containing one or more of the agents that decrease or inhibit TIGIT expression and/or activity
and agents that decrease or inhibit one or more additional immune co-inhibitory receptors
described herein. In some embodiments, the kit comprises a container containing one or
more of the agents that decrease or inhibit TIGIT expression and/or activity and agents that
increase or activate one or more additional immune co-stimulatory receptors described
herein. Suitable containers include, for example, bottles, vials (e.g., dual chamber vials),
syringes (such as single or dual chamber syringes) and test tubes. The container may be
formed from a variety of materials such as glass or plastic. In some embodiments, the kit
may comprise a label (e.g., on or associated with the container) or a package insert. The label
or the package insert may indicate that the compound contained therein may be useful or
intended for treating or delaying progression of cancer in an individual or for enhancing
immune function of an individual having cancer. The kit may further comprise other
materials desirable from a commercial and user standpoint, including other buffers, diluents,
filters, needles, and syringes.
EXAMPLES
The invention can be further understood by reference to the following examples,
which are provided by way of illustration and are not meant to be limiting.
Example 1: TIGIT is highly expressed on exhausted CD8 and CD4 T cells and
correlated with PD-1 expression.
To confirm that CD8 T cells are competent to express TIGIT after stimulation in
vitro, MACS-enriched C57BL6/J splenic CD8 T cells were stimulated with plate-bound
anti-CD3 and anti-CD28 for 24-48 hours in vitro. Flow cytometry was used to measure
TIGIT expression. In line with TIGIT’s expression by CD4 T cells (Yu, X., et al. The
surface protein TIGIT suppresses T cell activation by promoting the generation of mature
immunoregulatory dendritic cells. Nature immunology 10, 48-57 (2009)), murine CD8 T
cells expressed TIGIT within 48 hours of stimulation in vitro ().
To assess TIGIT expression by activated CD8 T cells in vivo, C57BL6/J mice were
infected with Armstrong strain Lymphocytic Choriomeningitis Virus (LCMV), and
splenocytes were analyzed 7 days after infection. Briefly, for acute infections, mice were
intravenously infected with 2x10 plaque-forming units (PFU) Armstrong strain LCMV.
low high
Flow cytometry was used to measure TIGIT expression by naïve (CD44 CD62L ) and
high low +
effector memory (CD44 CD62L ) CD8 and CD4+ T cells. At the peak of the LCMV T
cell response, a subset of CD4 effector memory T cells (T ) and nearly all CD8 T cells
EM EM
strongly expressed TIGIT (). Flow cytometry was used to measure TIGIT
high low +
expression by PD-1 and PD-1 effector memory CD8 T cells. Interestingly, TIGIT
expression was near perfectly correlated with PD-1 expression ().
Because PD-1 is associated with T cell exhaustion, TIGIT expression was examined
on chronically stimulated T cells. Briefly, for chronic infections, C57BL6/J mice were
intravenously infected with 2x10 PFU Clone 13 strain LCMV and treated with 500ug and
250ug of depleting anti-CD4 antibodies (clone GK1.5) 3 days before and 4 days after
infection, respectively. Where indicated, mice infected with Clone 13 strain LCMV received
intraperitoneal injections of 200ug of isotype control antibodies, 200ug of anti-PD-L1
antibodies, and/or 500ug of anti-TIGIT antibodies 3 times per week from days 28 to 42 post-
infection. Splenocytes were analyzed 42 days after infection. Flow cytometry was used to
low high high
measure TIGIT expression by naïve (CD44 CD62L ), central memory (CD44
high high low +
CD62L ), and effector memory (CD44 CD62L ) CD8 T cells. Indeed, in mice
chronically infected with Clone 13 strain LCMV, TIGIT was highly expressed predominantly
high low
on PD-1 T cells but not on naïve cells, PD-1 T cells, or central memory T cells ().
Example 2: A Role of TIGIT in T cell exhaustion in TIGIT Deficient Mice.
To characterize the role of TIGIT in T cell exhaustion, mice in which TIGIT was
fl/fl +
conditionally deleted in T cells were generated (TIGIT CD4-cre (CKO), . Briefly,
cre loxP/loxP
CD4 mice and TIGIT mice were generated on a C57BL/6J background with standard
techniques and crossed. The quality-tested ES cell line (Art B6/3.6 (genetic background:
C57BL/6 NTac) was grown on a mitotically inactivated feeder layer comprised of mouse
embryonic fibroblasts in ES cell culture medium containing Leukemia inhibitory factor and
Fetal Bovine Serum. The cells were electroporated with the linearized DNA targeting vector
according to Taconic Artemis' Standard Operation Procedures. G418 and Gancyclovir
selection were used as mechanisms for enrichment of homologously recombined clones.
Resistant ES cell colonies (ES clones) with a distinct morphology were isolated on day 8
after transfection and analysed by Southern Blotting and/or PCR in a primary screen.
Homologous recombinant ES cell clones were expanded and frozen in liquid nitrogen after
extensive molecular validation. The neo cassette was removed by flpE recombinase before
microinjection into Bl/6 female albino donors. Chimeric offspring were produced and tails
were screened by PCR for germline transmission. TIGIT expression was ablated with 96%
loxP/loxP cre
efficiency from T cells in TIGIT CD4 mice.
Mice whose T cells lacked TIGIT mounted a CD4 and CD8 T cell response to
acute Armstrong strain LCMV infection that was similar to wild-type mice (.
fl/fl -
To assess the effect in a chronic infection setting, TIGIT CD4-cre (WT) and
fl/fl + +
TIGIT CD4-cre (CKO) mice were briefly depleted of CD4 T cells and infected with
Clone 13 strain LCMV. Splenocytes and liver viral titers were analyzed 42 days after
infection. After chronic infection with Clone 13 strain LCMV, significantly more CD8 and
+ fl/fl +
CD4 T cells from TIGIT CD4-cre (CKO) mice were competent to produce interferon
fl/fl -
gamma (IFN γ) than were T cells from wildtype littermate mice (TIGIT CD4-cre (WT))
(82-86% increase, P < 0.01, -4D). Furthermore, viral loads were significantly
fl/fl +
reduced in chronically infected TIGIT CD4-cre (CKO) mice (68% decrease, P < 0.0001,
).
These results suggest that TIGIT plays an important role in regulating T cell activity
and response during chronic immune responses such as during a chronic viral infection, and
that TIGIT can regulate the effector function, in particular the competency to produce
effector cytokines, such as IFNγ and TNFα, of chronically stimulated or exhausted CD8
and CD4 T cells.
Example 3: TIGIT and PD-1 synergistically regulate the effector function of exhausted
T cells in vivo.
Since TIGIT expression was closely correlated with PD-1 expression, especially in
CD8 T cells during acute and chronic viral infection (, blocking TIGIT and PD-1 in
combination may restore T cell effector function to greater levels than would be obtained by
blocking either co-receptor singly.
To test this hypothesis, C57BL6/J mice were briefly depleted of CD4 T cells and
infected with Clone 13 strain LCMV. For chronic infections, mice were intravenously
infected with 2x10 PFU Clone 13 strain LCMV and treated with 500ug and 250ug of
depleting anti-CD4 antibodies (clone GK1.5) 3 days before and 4 days after infection,
respectively. Where indicated, mice infected with Clone 13 strain LCMV received
intraperitoneal injections of 200ug of isotype control antibodies, 200ug of anti-PD-L1
antibodies, and/or 500ug of anti-TIGIT antibodies 3 times per week from days 28 to 42 post-
infection. Treatment was started at 28 days post-infection because the T cell response is
largely exhausted at this time-point in this model of chronic viral infection (Wherry et al,
Molecular Signature of CD8+ T cell Exhaustion During Chronic Viral Infection, Immunity.
2007 Oct;27(4):670-84). Splenocytes and liver viral titers were analyzed 42 days after
infection.
In these mice, anti-PD-L1 treatment induced more robust CD8 T cell activation
than did treatment with matched isotype control antibodies (88% increase, P < 0.0001, ), as previously reported (Barber, D.L., et al. Restoring function in exhausted CD8 T cells
during chronic viral infection. Nature 439, 682-687 (2006)). Anti-TIGIT treatment had no
apparent effect on CD8 T cell activation on its own or in combination with anti-PD-L1
(). Similarly, blockade of PD-1 alone moderately increased CD8 T cell cytokine
competency, whereas blockade of TIGIT alone had no effect (). However, the
frequency of IFNγ-producing CD8 T cells was increased dramatically in mice treated with
both anti-TIGIT and anti-PD-L1, and to a significantly greater extent than seen in mice
treated with anti-PD-L1 alone ( 93% increase, P = 0.0050). A similar effect was
observed with CD4 T cells (. As also shown in , TIGIT/PD-L1 co-blockade
significantly enhanced CD8 T cell effector function, but not CD4 T cell effector function,
in mice compared to mice treated with anti-PD-L1 alone. Similar effects were also observed
on T cell expansion and effector function in LCMV gp33 antigen-specific T cells ().
These results demonstrate a strong synergy between PD-1 and TIGIT on exhausted CD8 T
cells, and indicate that TIGIT specifically regulates CD8 T cell cytokine competency and
effector function.
Consistent with these results, LCMV viral loads were moderately reduced in mice
treated with anti-PD-L1 alone, not reduced in mice treated with anti-TIGIT alone, and
substantially reduced in mice treated with both anti-TIGIT and anti-PD-L1 (68% viral titer
reduction with anti-PD-L1 treatment, P = 0.0004. 92% viral titer reduction with anti-TIGIT +
anti-PD-L1 treatment, P < 0.0001, ). These data demonstrate a strong synergy
between the inhibitory effects of PD-1 and TIGIT, and suggest that unlike PD-1, TIGIT is not
a broad inhibitor of effector T cell activation, but rather has a restricted role in limiting T cell
cytokine competency and effector function.
Example 4: TIGIT expression is elevated in human breast cancer and correlated with
expression of CD8 and inhibitory co-receptors.
T cell exhaustion is also a major immunological feature of cancer, with many
tumor-infiltrating lymphocytes (TILs) expressing high levels of inhibitory co-receptors and
lacking the capacity to produce effector cytokines (Wherry, E.J. T cell exhaustion. Nature
immunology 12, 492-499 (2011); Rabinovich, G.A., Gabrilovich, D. & Sotomayor, E.M.
Immunosuppressive strategies that are mediated by tumor cells. Annual review of
immunology 25, 267-296 (2007)).
To determine if TIGIT inhibits TIL effector function, breast cancer gene expression
microarray data generated by the Cancer Genome Atlas Network (CGAN) was analyzed
(Network, C.G.A. Comprehensive molecular portraits of human breast tumours. Nature 490,
61-70 (2012)).
TIGIT expression was significantly elevated in breast tumors overall (135%
increase relative to normal samples, P = 6x10 , ) and across the four major
molecular subtypes of breast cancer () (Perou, C.M., et al. Molecular portraits of
human breast tumours. Nature 406, 747-752 (2000); Sorlie, T., et al. Gene expression
patterns of breast carcinomas distinguish tumor subclasses with clinical implications.
Proceedings of the National Academy of Sciences of the United States of America 98, 10869-
10874 (2001)). Expression of TIGIT was highly correlated with expression of CD3ε,
consistent with its expression by TILs (R = 0.61, ). Interestingly, TIGIT expression
was highly correlated with CD8α but not with CD4, or only moderately correlated with CD4,
suggesting that TIGIT might primarily regulate CD8 TIL function (CD8α, R = 0.80. CD4,
R = 0.42. ).
Given the co-expression of TIGIT and PD-1 during chronic viral infection, we also
assessed the correlation of PD-1 and other inhibitory co-receptors with TIGIT in breast
cancer. Correlation between TIGIT and PD-1, CTLA4, and LAG3 was very strong (PD-1, R
= 0.87. CTLA4, R = 0.76. LAG3, R = 0.80. ). Collectively, these data suggested
that TIGIT was expressed by TILs, especially CD8 T cells, and that it might suppress their
function.
Example 5: TIGIT and PD-1 inhibit anti-tumor T cell responses.
To better characterize TIGIT by TILs in mice, BALB/C mice were inoculated with
CT26 colorectal carcinoma cells. Briefly, BALB/c mice were subcutaneously inoculated
with 1x10 CT26 colon carcinoma cells suspended in matrigel (BD Biosciences) into the
right unilateral thoracic flank. After two weeks, mice bearing tumors of approximately 200
mm were randomly recruited into treatment groups receiving 35 mg/kg of isotype control
antibodies, anti-PD-L1 antibodies, and/or anti-TIGIT antibodies by intraperitoneal injection 3
times per week for 3 weeks. Tumors were measured 2 times per week by caliper. Animals
whose tumors became ulcerated/necrotic or grew larger than 2000 mm were euthanized.
Splenocytes and tumor-infiltrating lymphocytes (TILs) were analyzed 14 days after
inoculation, when tumors had reached approximately 200mm in size.
Consistent with TIGIT expression in human tumors (, both CD8 and CD4
CT26 TILs expressed high levels of TIGIT (-7B). Furthermore, in line with the
chronic viral infection studies, TIL TIGIT expression was tightly correlated with expression
of other inhibitory co-receptors including PD-1 (-7B) and Tim-3 (. A similar
pattern of TIGIT expression was found in MC38 colon carcinoma tumors (.
To test the physiological relevance of TIGIT expression in the context of an anti-
tumor immune response, BALB/C mice with established CT26 tumors (approximately
200mm in size) were treated with 200ug isotype control, 200ug anti-PD-L1, 500ug anti-
TIGIT, or 200ug anti-PD-L1 + 500ug anti-TIGIT antibodies for three weeks.
CT26 tumor growth was only slightly slowed by treatment with anti-TIGIT or anti-
PD-L1 alone, both of which resulted in a modest 3 day increase in median survival (-
7D). However, combination therapy with both anti-PD-L1 and anti-TIGIT dramatically
reduced tumor growth (75% decrease in median tumor volume by day 16, P < 0.0001, FIG.
7C and ). Moreover, 70% of the mice receiving both anti-TIGIT and anti-PD-L1
experienced complete and durable tumor remission and survived for the duration of the study,
even in the absence of further antibody treatment (-7D). These effects were also
observed in tumor-bearing mice treated with a combination of blocking antibodies against
TIGIT and PD-1.
To test the immunity of these surviving mice to CT26 tumor cells, approximately 60
days after initial inoculation, mice in complete remission (CR) that had received anti-TIGIT +
anti-PD-L1, as well as naïve BALB/c mice, were re-inoculated with CT26 cells in their left
(not previously inoculated) unilateral thoracic flanks. These mice were also inoculated with 1
X 10 EMT6 breast carcinoma cells in matrigel into the fourth mammary fat pad. Tumors
were measured 2 times per week. Animals whose tumors became ulcerated/necrotic or
whose total tumor burden exceeded 2000 m were euthanized.
As shown in , both tumors grew readily in naïve control mice, but only
EMT6 tumors grew in mice that had previously cleared a CT26 tumor. These results
indicated that co-blockade of TIGIT and PD-1 during tumorigenesis established a state of
specific immunity to CT26 tumor cells.
To determine if the efficacy of TIGIT/PD-L1 co-blockade was mediated by CD8 T
cells, CT26-tumor bearing mice were subjected to CD8 T cell ablation using depleting
antibodies at the initiation of treatment with anti-TIGIT and anti-PDL1. Mice treated with
anti-TIGIT and anti-PD-L1 antibodies were unable to reject CT26 tumors when depleted of
CD8 T cells at the start of treatment (1532% increase in mean tumor volume after 17 days of
treatment, P = 0.0004, A-32B). Additionally, CD8 T cell depletion impaired the
ability of previously treated CR mice to control re-inoculated CT26 tumors (C).
Taken together, these results demonstrated that anti-TIGIT and anti-PD-L1 acted through
CD8 T cells to elicit effective primary and secondary anti-tumor immune responses.
To determine if PVR expression of tumor cells is dispensable for TIGIT/PD-L1 co-
blockade efficacy, wildtype BALB/c mice were inoculated with wildtype CT26 tumors
(which express PVR) or PVR-deficient CT26 tumors. Briefly, wildtype CT26 tumor cells
were transiently transfected with a nucleic acid that reduced expression of PVR.
Approximately two weeks after transfection, CT26 cells were subcloned on the basis of loss
of PVR expression by flow cytometry and qPCR. When tumors reached 150-200 mm in
size, mice were treated with anti-TIGIT and anti-PD-L1 antibodies, or isotype-matched
control antibodies. Mice treated with anti-TIGIT and anti-PD-L1 antibodies were able to
reject both wildtype and PVR-deficient tumors, as compared to tumor-inoculated mice treated
with control antibodies (). These results demonstrated that anti-TIGIT and anti-PD-
L1 act independently of tumor-expressed PVR.
The efficacy of TIGIT/PD-L1 co-blockade in the MC38 tumor model was also
tested and confirmed. Wildtype C57BL6/J mice were subcutaneously inoculated with
syngeneic MC38 colorectal carcinoma cells and treated established tumors with a
combination of TIGIT and PD-L1 blocking antibodies, as before. Unlike the CT26 model,
treatment with anti-PD-L1 alone was sufficient to induce a complete response in some mice
(). However, as in the CT26 model, treatment of MC38 tumor-bearing mice with both
anti-TIGIT and anti-PD-L1 synergistically reversed tumor growth and induced tumor
clearance in most mice (). These effects were also observed in mice inoculated with
syngeneic EMT6 breast carcinoma cells ().
These results demonstrated that co-blockade of TIGIT and PD-1 could elicit a
sustained and antigen-specific anti-tumor immune response. These results also suggested that
adaptive anti-tumor responses were fully functionally and reactivated in therapeutically
treated mice.
To assess the functional effects of TIGIT and PD-1 blockades on the tumor-
infiltrating lymphocytes themselves, mice were inoculated with CT26 tumor cells and treated
with anti-TIGIT and/or anti-PD-L1 as before. Seven days after the start of treatment, tumors
and tumor-draining lymph nodes were collected for analysis by flow cytometry.
Tumor-infiltrating and tumor-draining lymph node resident CD4 T cells produced
little IFNγ, and did not produce more upon TIGIT/PD-1 blockade (). However,
tumor-infiltrating CD8 T cells from mice treated with both anti-TIGIT and anti-PD-L1, but
not those from mice treated with anti-TIGIT or anti-PD-L1 alone, were significantly more
competent to produce IFNγ upon stimulation in vitro (174% increase relative to control, P =
0.0001, D). Similar results were observed for CD8 TIL production of TNFα ().
Interestingly, mice treated with either anti-TIGIT or anti-PD-L1 alone, or both, all
saw increased cytokine competency of tumor-draining lymph node resident CD8 T cells (75-
113% increase, P < 0.001, ), suggesting that lymph node-resident CD8+ T cells were
under lesser degree of suppression than their tumor-infiltrating counterparts. Accumulation
and phenotypic activation of tumor-infiltrating and tumor-draining lymph node resident
CD8+ T cells and CD4+ T cells were unchanged and weakly enhanced by single antibody
treatment and dual antibody and dual antibody treatment, respectively (-13). The
frequencies of IFNγ/TNFα dual-producing CD8 T cells in tumors and tumor-draining lymph
nodes followed similar patterns (A-35B).
Consequently, while blockade of either TIGIT or PD-L1 alone was sufficient to
enhance CD8 T cell effector function in tumor-draining lymph nodes, blockade of both
receptors was necessary to restore the function of exhausted CD8 T cells within the tumor
itself, consistent with the notion that tumor microenvironments are highly
immunosuppressive.
Example 6: TIGIT co-expression with CD226 on tumor-infiltrating CD8+ T cells.
TIGIT competes with the co-stimulatory receptor CD226 for binding to Poliovirus
Receptor (PVR) (Yu, X., et al. The surface protein TIGIT suppresses T cell activation by
promoting the generation of mature immunoregulatory dendritic cells. Nature immunology
, 48-57 (2009). Given that CD226 deficiency can enhance T cell exhaustion during chronic
viral infection (Cella, M., et al. Loss of DNAM-1 contributes to CD8+ T-cell exhaustion in
chronic HIV-1 infection. European Journal of Immunology 40(4), 949-954 (2010); Welch,
M., et al. CD8 T cell defect of TNA-a and IL-2 in DNAM-1 deficient mice delays clearance
in vivo of a persistent virus infection. Virology 429(2) 163-170 (2012)), it is possible that
TIGIT may inhibit T cell responses in part by interfering with CD226 activity.
To evaluate whether there is a relationship between CD226 and TIGIT in inhibiting
T cell responses, the expression of TIGIT and CD226 was determined on tumor infiltrating
CD8+ T cells.
As shown in , C57BL6/J mice were inoculated with MC38 colorectal
carcinoma cells. Splenocytes and tumor-infiltrating lymphocytes (TILs) were analyzed by
FACs analysis approximately 14 days after inoculation, when tumors had reached
approximately 200mm3 in size. Representative histogram of CD226 expression by splenic B
cells (gray), splenic CD8+ T cells (blue), and TIGIT+ tumor-infiltrating CD8+ T cells (red).
Data are representative of two independent experiments; n = 5. illustrates that
splenic CD8+ T cells highly express CD226 and furthermore, that tumor-infiltrating TIGIT+
CD8+ T cells also highly expressed CD226. The data demonstrates that TIGIT and CD226
are coordinately expressed on murine tumor-infiltrating CD8 T cells, and may regulate each
other’s function on CD8 T cells. This observation is similar to that in activated CD4 T cells
and NK cells, which also co-express TIGIT and CD226.
Example 7: Co-immunoprecipitation of TIGIT and CD226 on transfected cells.
To determine whether TIGIT interacts with CD226 at the cell surface, cells were co-
transfected with human-TIGIT and human-CD226 and subjected to immunoprecipiation.
Briefly, COS 7 Cells in 15 cm plates were co-transfected with expression plasmids containing
the cDNA for either TIGIT-HA (5ng) or CD226-Flag (10ng) tagged proteins, or a control
plasmid (pRK). 23 hrs after transfection the cells were washed with PBS and harvested in 4
ml of ice cold PBS and centrifuged at 300xg for 5min and cell pellets were re-suspended in 2
ml of Lysis buffer at 4°C. The cells were lysed over 50 min with vortexing every 15 min and
subsequently centrifuged at 10,00xg for 15 min at 4C. The resultant supernatant was pre-
cleared with 160 µl of CL6B sepahrose slurry by rotating for 30 min at 4°C, and centrifuged
for 2 min at 3000xg. The supernatant was equally split into two tubes and immuno-
precipitated with either an anti-HA or an anti-flag using standard procedures. The immune-
precipitated proteins were subjected to SDS-PAGE and western blotted. Western blots were
probed with either anti-Flag-HRP or anti-HA-HRP.
As shown in , anti-TIGIT pulled down CD226 and anti-CD226 pulled down
TIGIT, demonstrating that TIGIT and CD226 are in physical contact at the cell surface.
Example 8: TIGIT and CD226 interact in primary CD8+ T cells.
In addition to demonstrating the ability of CD226 and TIGIT to interact in
transfected cells, the interaction of CD226 and TIGIT in primary CD8+ T cells was also
evaluated. Briefly, MACS-enriched splenic C57BL6/J CD8+ T cells were stimulated with
plate-bound anti-CD3 and anti-CD28 antibodies and recombinant IL-2 for 48 hours and
lysed. Cell lysates were immunoprecipitated with anti-TIGIT and probed with anti-CD226.
illustrates that TIGIT and CD226 interact in activated primary CD8+ cells as both
were detectable in the co-immunoprecipitate. This data demonstrates that CD226 and TIGIT
also interact with each other on primary cells.
Example 9: TIGIT/CD226 interaction on transfected cells using TR-FRET (Time
Resolved-Fluorescence Resonance Energy Transfer)
To assess whether there was any molecular interaction between TIGIT and CD226,
TR-FRET methodology was employed. FRET (Fluorescence Resonance Energy Transfer) is
based on the transfer of energy between two fluorophores, a donor and an acceptor, when in
close proximity. Molecular interactions between biomolecules can be assessed by coupling
each partner with a fluorescent label and by detecting the level of energy transfer. When two
entities come close enough to each other, excitation of the donor by an energy source triggers
an energy transfer towards the acceptor, which in turn emits specific fluorescence at a given
wavelength. Because of these spectral properties, a donor-acceptor complex can be detected
without the need for physical separation from the unbound partners. The combination of time
resolved (TR) measurements of FRET allow the signal to be cleared of background
fluorescence. This is typically done by introducing a time delay between the system
excitation and fluorescence measurement to allow the signal to be cleared of all non-specific
short-lived emissions.
Using TR-FRET, here we demonstrate that TIGIT and CD226 elicited a FRET
when expressed in the same cell, indicating molecular interaction of these two molecules.
Briefly, COS-7 cells were transfected with SNAP-tagged (ST) CD226 and HA-TIGIT using
Lipofectamine 2000 (Life Technologies) and seeded in a white 96-well plate (Costar) at
100,000 cells per well. 24 hours later, cells were labeled with 100 nM of donor-conjugated
benzyl-guanine SNAP-Lumi-4Tb (Cisbio) and 1 µM donor-conjugated benzyl-guanine
SNAP-A647 (New England Biolabs) diluted in DMEM 10% FCS for 1h at 37°C, 5% CO2.
After three washes in PBS, the FRET signal was recorded at 665 nm for 400 µs after a 60 µs
delay following laser excitation at 343 nm using a Safire2 plate reader (Tecan). When the
anti-TIGIT antibody was tested, the FRET signal was also recorded after a 15 min incubation.
The FRET ratio was then calculated as the FRET intensity divided by the donor emission at
620 nm. The FRET intensity being: (signal at 665 nm from cells labeled with SNAP-donor
and acceptor) – (signal at 665 nm from the same batch of transfected cells labeled with
SNAP-donor only).
As shown in , TIGIT was able to directly disrupt and cause dissociation of
CD226 homodimers. As shown in A, the dissociation of Flag-ST-CD226
homodimers was observed with increasing concentrations of HA-TIGIT as illustrated by the
decreasing FRET ratio between Flag-ST-CD226 measured on COS-7 cells expressing a
constant amount of Flag-ST-CD226 and increasing concentrations of HA-TIGIT. However,
as shown in B, when anti-TIGIT antibody was added to the cell culture, this blocked
the ability of TIGIT and CD226 to associate. This is illustrated by the lack of a decrease in
the FRET intensity of Flag-ST-CD226 homodimers. This demonstrates that CD226 and
TIGIT are associated as complexes but that anti-TIGIT antibodies can disrupt these
interactions (A and 17B).
Using TR-FRET, the ability of TIGIT to associate with CD226 was also
demonstrated and shown in C and 17D. Briefly, after SNAP-tag labeling using 1 µM
of donor-conjugated benzyl-guanine SNAP-A647 (see above), cells were washed three times
in PBS and incubated with 2 nM of anti-HA donor-conjugated Lumi-4Tb (Cisbio) diluted in
PBS + 0.2% BSA for 2 hours at room temperature. The FRET signal was then recorded. In
that case, the FRET intensity is: (signal at 665 nm from cells labeled with SNAP- acceptor
and anti-HA donor) – (signal at 665 nm from mock transfected cells labeled with SNAP-
acceptor and anti-HA donor).
As shown in C, association of Flag-ST-CD226 with HA-TIGIT was
observed as illustrated by the increasing FRET intensity between Flag-ST-CD226 and HA-
TIGIT measured on COS-7 cells expressing a constant amount of Flag-ST-CD226 and
increasing concentrations of HA-TIGIT. When anti-TIGIT antibody was added, the FRET
intensity decreased between Flag-ST-CD226 with HA-TIGIT, as shown in D,
suggesting that the interaction of TIGIT with CD226 can be blocked by an anti-TIGIT
blocking antibody.
To confirm the cell surface expression of Flag-ST-CD226 and HA-TIGIT in the
FRET experiments, anti-Flag and anti-HA ELISA on intact COS-7 cells expressing the
indicated tagged-constructs was performed. Briefly, COS7 cells were fixed with 4%
paraformaldehyde, washed twice, and blocked in phosphate-buffered saline + 1% fetal calf
serum (FCS). Cells were then incubated with an anti-HA monoclonal antibody (clone 3F10,
Roche applied science) or anti-Flag-M2 monoclonal antibody (Sigma), both conjugated with
horseradish peroxidase. After washes, cells were incubated with a SuperSignal ELISA
substrate (Pierce) and chemoluminescence was detected on a Safire2 plate reader (Tecan).
Specific signal was calculated by subtracting the signal recorded on mock transfected cells.
As illustrated in , cell surface expression of both CD226 and TIGIT were confirmed
in the ELISA assay.
To confirm that the TIGIT:CD226 interaction is not driven by PVR binding, Flag-
ST-CD226 and HA-TIGIT (WT) or HA-TIGIT Q56R were generated as described in Stengel
et al., (2012) PNAS 109(14):5399-5904 and FRET ratios were determined as described. As
shown in , WT TIGIT and Q56R TIGIT bind CD226 with the same efficacy.
This data not only demonstrates the CD226 and TIGIT are associated as complexes,
but that an anti-TIGIT antibody can disrupt these interactions and that the TIGIT:CD226
interaction is not driven by PVR binding. The data supports a role for TIGIT in limiting
CD226-mediated activation of T cells and that interference with CD226 activity may be an
important mechanism of action by which TIGIT inhibits T cell responses and activity.
Example 10: CD226 blockade reverses the effectors of TIGIT/PD-L1 blockade in vivo.
To test the physiological relevance of the CD226 and TIGIT interaction, mice were
chronically infected with Clone 13 LCMV and then treated with anti-TIGIT + anti-PD-L1 in
the absence or presence of anti-CD226 blocking antibodies. Briefly, C57BL6/J mice were
briefly depleted of CD4 T cells and infected with Clone 13 strain LCMV. For chronic
infections, mice were intravenously infected with 2x10 PFU Clone 13 strain LCMV and
treated with 500ug and 250ug of depleting anti-CD4 antibodies (clone GK1.5) 3 days before
and 4 days after infection, respectively. Where indicated, mice infected with Clone 13 strain
LCMV received intraperitoneal injections of 200ug of isotype control antibodies, 500ug of
anti-CD226 antibodies, 200ug of anti-PD-L1 antibodies + 500ug of anti-TIGIT antibodies, or
500ug of anti-CD226 antibodies + 200ug of anti-PD-L1 antibodies + 500ug of anti-TIGIT
antibodies 3 times per week from days 28 to 42 post-infection. Treatment was started at 28
days post-infection because the T cell response is largely exhausted at this time-point in this
model of chronic viral infection (Wherry et al, Molecular Signature of CD8+ T cell
Exhaustion During Chronic Viral Infection, Immunity. 2007 Oct;27(4):670-84). Splenocytes
and liver viral titers were analyzed 42 days after infection.
In these mice, anti-CD226 treatment alone had limited effects on CD8 T cell
frequency, activation, or cytokine competency (A-19C). However, anti-CD226
treatment potently reversed the increases in CD8 T cell activation and IFNg production seen
in mice treated with anti-PD-L1 + anti-TIGIT (59% and 58% decreases, respectively, P <
0.001. FIG 19B-19D).
Consistent with these results, LCMV viral loads were significantly higher in mice
treated with anti-CD226 + anti-PD-L1 + anti-TIGIT than in mice treated with anti-PD-L1 +
anti-TIGIT alone (272% increase, P < 0.001, D).
This data suggests that a primary mechanism by which TIGIT limits chronic T cell
responses is interference with CD226-mediated co-stimulation. The data identifies a
previously unknown role for TIGIT in interacting with and disrupting CD226, resulting in the
reduction or loss of a key co-stimulatory signal in CD8 T cells. The data demonstrates that
interference with CD226-mediated T cell costimulation may be a major mechanism by which
TIGIT limits chronic T cell responses such as during cancer or chronic viral infection. The
data also defines an essential parameter for anti-TIGIT antibodies intended to restore the
effector function of chronically stimulated or exhausted CD8 or CD4 T cells by interfering
with TIGIT’s ability to interact with CD226 and/or TIGIT’s ability to disrupt CD226
dimerization.
Materials and Methods
Mice. C57BL/6J and BALB/c mice were purchased from the Jackson Laboratory
cre loxP/loxP
and Charles River Laboratories. CD4 mice and TIGIT mice were generated on a
C57BL/6J background with standard techniques and crossed. TIGIT expression was ablated
loxP/loxP cre
with 96% efficiency from T cells in TIGIT CD4 mice.
Flow cytometry. Single cell suspensions of spleen, lymph node, and tumor were
prepared with gentle mechanical disruption. Surface staining was performed with commercial
antibodies against CD4, CD8, CD44, CD62L, PD-1 (eBiosciences) and CD226 (Biolegend).
TIGIT antibodies were generated at Genentech as previously described (Yu, X. et al. The
surface protein TIGIT suppresses T cell activation by promoting the generation of mature
immunoregulatory dendritic cells. Nature immunology 10, 48-57 (2009)) and conjugated to
Alexa Fluor 647 according to the manufacturer’s directions (Molecular Probes).
For intracellular cytokine staining (ICS), cells were stimulated for 4 hours with 20
ng/mL Phorbol 12-myristate 13-acetate (PMA, Sigma) and 1 µM Ionomycin (Sigma) in the
presence of 3 µg/mL Brefeldin A (eBiosciences). After stimulation, cells were stained for
surface markers as described and fixed and permeabilized with eBioscience’s FoxP3 fixation
buffer set according to the manufacturer’s directions. Fixed cells were stained with antibodies
against IFN ɣ and TNF α (eBiosciences).
Blocking antibodies. A blocking anti-TIGIT IgG2a monoclonal antibody (clone
10A7, reactive against both mouse and human TIGIT) was generated as previously described
and cloned onto a murine IgG2a backbone. A blocking anti-PD-L1 IgG2a monoclonal
antibody (clone 25A1) was generated by immunizing Pdl1 mice with a PDFc fusion
protein and cloned onto a murine IgG2a backbone. Clone 25A1 was modified with previously
described mutations abolishing binding to Fcγ receptors. A blocking anti-CD226 IgG2a
monoclonal antibody (clone 37F6) was generated by immunization of hamsters with
recombinant murine CD226 and cloned onto a murine IgG2a backbone. These antibodies
were also used in tests described in other Examples described herein.
Viral infections. For acute infections, mice were intravenously infected with 2x10
plaque-forming units (PFU) Armstrong strain LCMV. For chronic infections, mice were
intravenously infected with 2x10 PFU Clone 13 strain LCMV and treated with 500ug and
250ug of depleting anti-CD4 antibodies (clone GK1.5) 3 days before and 4 days after
infection, respectively. Where indicated, mice infected with Clone 13 strain LCMV received
intraperitoneal injections of 200ug of isotype control antibodies, 200ug of anti-PD-L1
antibodies, and/or 500ug of anti-TIGIT antibodies 3 times per week from days 28 to 42 post-
infection.
Viral titer assay. Monolayers of MC57 cells were cultured with an overlay of 1%
methylcellulose and infected with serially diluted liver homogenates from LCMV-infected
mice. 72 hours after infection, the cells were fixed with 4% paraformaldehyde and
permeabilized with 0.5% Triton-X. Viral plaques were stained with anti-LCMV NP (clone
VL-4) and HRP-conjugated anti-rat IgG and visualized with O-phenylenediamine (OPD,
Sigma).
Bioinformatics. Breast cancer gene expression data microarray data was obtained
from the Cancer Gene Atlas Network (Network, T.C.G.A. Comprehensive genomic
characterization of squamous cell lung cancers. Nature 489, 519-525 (2012)). Processing and
normalization of microarray data were performed using the R programming language
(http://r-project.org) and Bioconductor’s limma package (http://bioconductor.org).
Microarray intensity values from each channel were preprocessed using the normal +
exponential background correction method, as previously described . Corrected intensity
values were then normalized using quantiles normalization, as previously described .
Normalized log-ratio data was calculated by subtracting the reference channel from the test
channel for each array. Data were further filtered using a non-specific filter, as previously
described , removing probes that do not map to known genes, and reducing the dataset to
one probe per gene. For differential expression analysis, moderated t-statistics were
calculated with the limma package, as previously described (Smyth, G.K. Linear models and
empirical bayes methods for assessing differential expression in microarray experiments.
Statistical applications in genetics and molecular biology 3, Article3 (2004)). To evaluate
correlation, Pearson’s correlation coefficients were used.
CT26 colon carcinoma. BALB/c were subcutaneously inoculated with 1x10 CT26
colon carcinoma cells suspended in matrigel (BD Biosciences) into the right unilateral
thoracic flank. After two weeks, mice bearing tumors of approximately 200 mm were
randomly recruited into treatment groups receiving 35 mg/kg of isotype control antibodies,
anti-PD-L1 antibodies, and/or anti-TIGIT antibodies by intraperitoneal injection 3 times per
week for 3 weeks. Tumors were measured 2 times per week by caliper. Animals whose
tumors became ulcerated/necrotic or grew larger than 2000 mm were euthanized.
EMT6 breast carcinoma. BALB/c mice were subcutaneously inoculated in the
fourth mammary fat pad with 1x10 syngeneic EMT6 breast carcinoma cells in matrigel (BD
Biosciences). After two weeks, mice bearing tumors of 150-200 mm were randomly
recruited into treatment groups receiving 35 mg/kg of isotype control antibodies, anti-PD-L1
antibodies, and/or anti-TIGIT antibodies by intraperitoneal injection 3 times per week for 3
weeks. Tumors were measured 2 times per week by caliper, and tumor volumes were
calculated using the modified ellipsoid formula, ½ x (length x width ). Animals whose
tumors shrank to 32 mm or smaller were considered to be in complete response (CR).
Animals whose tumors grew to larger than 2000 mm were considered to have progressed
and were euthanized. Animals whose tumors became ulcerated prior to progression or
complete response were euthanized and removed from the study.
CT26 re-challenge. Where indicated, BALB/c mice previously inoculated with
CT26 colon carcinoma cells as described above were re-inoculated with CT26 cells into the
left (not previously inoculated) unilateral thoracic flank. These mice were also inoculated
with 1x10 EMT6 breast carcinoma cells in matrigel into the fourth mammary fat pad.
Tumors were measured 2 times per week. Animals whose tumors became ulcerated/necrotic
or whose total tumor burden exceeded 2000 mm were euthanized.
Statistics. Statistical tests were conducted using unpaired (paired where specified)
2-tailed Student’s t-tests. Error bars depict the standard error of the mean.
Animal Study Oversight. All animal studies were approved by Genentech’s
Institutional Animal Care and Use Committee.
Example 11: TIGIT expression is elevated in human cancer and correlated with
expression of CD8 and PD-1 and CD8+ T cell infiltration.
Materials and Methods
Bioinformatics. Processing and analysis of RNA-sequencing data was performed
using the R programming language (http://www.r-project.org) along with several packages
from the Bioconductor project (http://www.bioconductor.org). RNA-sequencing data for
cancer and matched normal samples were obtained from the TCGA for five different
indications: breast cancer (Network, C.G.A. Comprehensive molecular portraits of human
breast tumours. Nature 490, 61-70 (2012)), colon adenocarcinoma (Network, T.C.G.A.
Comprehensive molecular characterization of human colon and rectal cancer. Nature 487,
330-337 (2012)), renal clear cell carcinoma (Network, C.G.A. Comprehensive molecular
characterization of clear cell renal cell carcinoma. Nature 499, 43-49 (2013)), lung squamous
cell carcinoma (Network, T.C.G.A. Comprehensive genomic characterization of squamous
cell lung cancers. Nature 489, 519-525 (2012)), and endometrial carcinoma (Network,
T.C.G.A. Integrated genomic characterization of endometrial carcinoma. Nature 497, 67-73
(2012)).
Raw RNA-seq reads were processed using the HTSeqGenie Bioconductor package.
Briefly, reads were aligned to the human genome (NCBI build 37) using the GSNAP
algorithm (Wu, T.D. & Nacu, S. Fast and SNP-tolerant detection of complex variants and
splicing in short reads. Bioinformatics (Oxford, England) 26, 873-881 (2010)). Uniquely
aligned read pairs that fell within exons were counted to give an estimate of gene expression
level for individual genes. We used the library size estimation from the edgeR package
(Robinson, M.D., McCarthy, D.J. & Smyth, G.K. edgeR: a Bioconductor package for
differential expression analysis of digital gene expression data. Bioinformatics (Oxford,
England) 26, 139-140 (2010)) to normalize across different samples for their respective
sequencing depths.
To derive a T cell specific gene signature, we manually curated the T cell genes
identified by the IRIS project, removing genes associated with cell cycle processes, genes
highly expressed in other tissues, and known co-activating and co-inhibitory receptors. This
yields a 15-gene signature that is specific to T cells. To calculate the T cell gene expression
signature score in the lung squamous cell carcinoma data, we first performed a variance
stabilizing transform on the raw count data using the voom function from the limma
Bioconductor package. We then calculated the first eigenvector of the centered and scaled
variance-stabilized data from the 15-gene T cell signature. This approach yields a robust per-
sample estimate of relative T cell abundance. A linear model including the T cell signature
score was then fit for each gene, again using the limma package. We then ranked the genes
by their correlation with the T cell signature in our linear model, choosing only genes
positively correlated with the T cell signature. For visualizing T cell-associated genes as a
heatmap, we centered and scaled the variance-stabilized data to unit variance, allowing for
comparison of genes with different average expression levels.
To determine the correlation between expression of TIGIT and other genes, we
normalized RNA-sequencing count data to account for differences in library size, using the
method from the edgeR Bioconductor package (Robinson, M.D., McCarthy, D.J. & Smyth,
G.K. edgeR: a Bioconductor package for differential expression analysis of digital gene
expression data. Bioinformatics (Oxford, England) 26, 139-140 (2010)). We then calculated
Spearman’s rank correlation coefficient on the normalized counts. We consider rho > 0.75 to
be indicative of strong correlation, rho ≤ 0.75 but > 0.5 to be indicative of moderate
correlation, and rho ≤ 0.5 but > 0.25 to be indicative of weak correlation.
For calculation of TIGIT/CD3 ɛ ratios across each indication, we first calculated the
variance-stabilized data for each RNA-sequencing data set. We then calculated the log2 ratio
of the variance-stabilized data for TIGIT and CD3 ɛ. To calculate the difference between
tumor and normal samples, we performed standard linear model analysis using standard R
functions. We accepted a p-value of <0.01 as evidence of a significant difference between
tumor and normal.
To identify genes associated with tumor-infiltrating T cells, we used a gene
signature-based approach to interrogate gene expression data from the Cancer Genome Atlas
(TCGA) lung squamous cell carcinoma (LUSC) collection (Network, T.C.G.A.
Comprehensive genomic characterization of squamous cell lung cancers. Nature 489, 519-
525 (2012)). Using immune cell-specific gene sets defined by the Immune Response In Silico
project (Abbas, A.R. et al. Immune response in silico (IRIS): immune-specific genes
identified from a compendium of microarray expression data. Genes and immunity 6, 319-
331 (2005)), and the methods described above, we developed a highly specific 15 gene
signature. Examining the genes most highly associated with the T cell signature, we
identified several co-inhibitory receptors previously associated with T cell dysfunction in
tumors, particularly PD-1 (). In LUSC, expression of TIGIT and CD3 ɛ were highly
correlated, with a Spearman’s rank correlation coefficient ( ρ of 0.82 (A). Indeed,
TIGIT and CD3 ɛ expression were also highly correlated in many additional TCGA tumor
gene expression datasets, including colon adenocarcinoma (COAD), uterine corpus
endrometroid carcinoma (UCEC), breast carcinoma (BRCA), and kidney renal clear cell
carcinoma (KIRC), with ρ ranging from 0.83 to 0.94 (B-20E). Furthermore,
expression of TIGIT was elevated relative to expression of CD3 ɛ in many tumor samples,
with increased TIGIT/CD3 ɛ ratios in LUSC, COAC, UCEC, and BRCA tumor samples
compared to matched normal tissue (116% - 419% increase, A-20D). The ratio of
TIGIT to CD3 ɛ expression in KIRC samples was unchanged, though expression of both
TIGIT and CD3 ɛ was much higher in KIRC samples than in normal tissue samples (E). These data indicated that TIGIT expression was up-regulated by tumor-infiltrating
lymphocytes (TILs) in a broad range of solid tumors.
TIGIT has been previously described as an inhibitor of CD4+ T cell priming, with
no known function in CD8+ T cells. However, TIGIT expression in LUSC samples was
highly correlated with CD8A and only weakly correlated with CD4 ( ρ = 0.77 and 0.48
respectively, F). Expression of TIGIT was also correlated with expression of its
complementary co-stimulatory receptor, CD226, as well as with expression of PD-1, a key
mediator of T cell suppression in tumors and during other chronic immune responses (ρ =
0.64 and 0.82 respectively, G-20H). Although some non-lymphocyte cell sources of
these genes exist in tumors, these data strongly suggested that tumor-infiltrating T cells,
particularly “exhausted” CD8 T cells, expressed high levels of TIGIT.
Example 12: TIGIT and PD-1 are coordinately expressed by human and murine tumor-
infiltrating lymphocytes
Materials and Methods
Human tumor and PBMC samples. Matched whole blood and fresh surgically
resected tumor tissues were obtained from Conversant Biosciences or Foundation Bio. All
specimens were obtained with written informed consent and collected using a protocol
approved by the Hartford Hospital Institutional Review Board (IRB) (NSCLC patient 1,
depicted in ) or the Western IRB (NSCLC patient 2 and CRC patient 1, depicted in
and ). Normal adult whole blood was obtained from a healthy volunteer.
PBMCs were purified from whole blood by Ficoll gradient centrifugation. Tumor tissues
were cut into small pieces, and incubated with collagenase and DNAse (Roche), and
disassociated using a gentleMACS Disassociator (Miltenyi).
Flow cytometry. Single cell suspensions of mouse spleen, lymph node, and tumor
were prepared with gentle mechanical disruption. Surface staining was performed with
commercial antibodies against CD4, CD8, CD44, CD62L, PD-1 (eBiosciences) and CD226
(Biolegend). TIGIT antibodies were generated at Genentech and conjugated to Alexa Fluor
647 according to the manufacturer’s directions (Molecular Probes).
For intracellular cytokine staining (ICS), cells were stimulated for 4 hours with 20
ng/mL Phorbol 12-myristate 13-acetate (PMA, Sigma) and 1 μM Ionomycin (Sigma) in the
presence of 3 μg/mL Brefeldin A (eBiosciences). After stimulation, cells were stained for
surface markers as described and fixed and permeabilized with eBioscience FoxP3 fixation
buffer set according to the manufacturer’s directions. Fixed cells were stained with antibodies
against IFN γ and TNF α (eBiosciences).
Human tumor and PBMC samples were prepared as described above. Surface
staining was performed with a viability dye (Molecular Probes), commercial antibodies
against CD45 (eBiosciences), CD3, CD4, CD8, PD-1 (BD Biosciences), and with anti-TIGIT
antibodies prepared as described above.
All samples were acquired on LSR-II or LSR-Fortessa instruments (BD
Biosciences) and analyzed using FlowJo software (Treestar).
To confirm up-regulation of TIGIT by tumor-infiltrating T cells, we assessed TIGIT
protein expression on human non-small-cell lung carcinoma tumor-infiltrating T cells,
matched peripheral T cells, and normal donor peripheral T cells. Cell surface TIGIT was
expressed by subsets of NSCLC-infiltrating CD8 and CD4 T cells (51% and 39%
respectively, A-22B. further demonstrates that cell surface TIGIT was
expressed by a large percentage of NSCLC-infiltrating CD8 and CD4 T cells (58% and
+ + +
28% TIGIT respectively, A-36B). Interestingly, peripheral CD8 and CD4 T cells
from the NSCLC tumor donor also expressed higher levels of TIGIT than did cells from
healthy donors (A-22B and A-36B). Similar results were obtained with a
second set of matched NSCLC and PBMC samples and in a set of matched colorectal
carcinoma (CRC) and PBMC samples ( and ). Nearly all tumor-infiltrating T
cells expressing high levels of TIGIT co-expressed PD-1, consistent with the correlation
between TIGIT and PD-1 expression described in (C).
To extend our human findings into pre-clinical cancer models, we characterized
TIGIT expression by T cells infiltrating subcutaneous CT26 and MC38 colorectal tumors in
wildtype BALB/c mice and C57BL6/J mice, respectively. Two weeks post-inoculation, when
CT26 and MC38 tumors had become established and grown to 150-200 mm in size, TIGIT
was expressed by approximately 50% of tumor-infiltrating CD8 T cells and 25% of tumor-
infiltrating CD4 T cells, at levels similar to those of primary CD8 T cells stimulated in vitro
(D-22E and ). In both CD8 and CD4 murine TILs, CD226 was
constitutively expressed, and TIGIT and PD-1 expression were again tightly correlated (F-22G).
These results confirmed that TIGIT was highly expressed by tumor-infiltrating T
cells, and that expression of TIGIT occurred in parallel with expression other co-inhibitory
receptors, most notably PD-1.
Example 13: TIGIT suppression of CD8+ T cells responses is dependent on CD226
Unlike PD-1 or CTLA-4, there is no direct biochemical evidence of a T cell
inhibitory signaling cascade initiated by TIGIT in cis. However, co-inhibitory receptors can
also function by limiting the activity of a complementary co-stimulatory receptor, such as
with the suppression of CD28 signaling by CTLA-4. Having established TIGIT as a negative
regulator of tumor-infiltrating and anti-viral CD8 T cells, we asked whether TIGIT induced
T cell exhaustion indirectly via suppression of its complementary co-stimulatory receptor,
CD226, which is highly expressed by peripheral and tumor-infiltrating CD8 T cells ().
Wildtype BALB/c mice bearing 150-200 mm CT26 tumors were treated with a
combination of anti-PD-L1 and anti-TIGIT antibodies in the presence or absence of blocking
anti-CD226 antibody, or with anti-CD226 alone. Treatment with anti-CD226 alone slightly
accelerated tumor growth, relative to control mice, resulting in a decreased median survival
of 2 days (anti-CD226 alone vs. control, P = 0.0118, A-28B). Strikingly, the addition
of anti-CD226 blocking antibodies to mice treated with anti-TIGIT and anti-PD-L1 co-
blockade greatly enhanced tumor growth and fully reversed the efficacy of TIGIT/PD-L1 co-
blockade on tumor regression and survival (A-28B). A similar effect was observed
on LCMV titers in chronically infected mice treated with anti-TIGIT, anti-PD-L1, and/or
anti-CD226 (D). These data indicated that CD226 contributed to anti-tumor and other
chronic T cell responses, and that TIGIT suppressed these responses at least in part by
suppression of CD226.
To more fully understand how TIGIT and CD226 activity affected anti-tumor T cell
responses, we tested how CD226 alone and in concert with TIGIT influenced T cell
activation, tumor infiltration, and effector function. We analyzed tumors and tumor-draining
lymph nodes from CT26 tumor-bearing mice treated as above for seven days. As before, co-
blockade of PD-L1 and TIGIT enhanced IFNγ production of both tumor-infiltrating and
tumor-draining lymph node-resident CD8 T cells (130% and 99% increase, respectively, P <
0.001, C-28D). Blockade of CD226 alone had no effect on IFNγ production by
tumor-infiltrating and tumor-draining lymph node-resident CD8 T cells, suggesting that the
effects of CD226 co-stimulation were already limited in exhausted T cells (C-28E).
However, CD226 blockade did impair both the frequency and effector function of tumor-
infiltrating CD8 T cells in mice treated with combination anti-TIGIT and anti-PD-L1 (57%
decrease, P = 0.0015, D). Treatment with anti-CD226 had no such effect on CD8 T
cells residing in the tumor-draining lymph nodes, whereas anti-PD-L1 alone enhanced CD8
T cell effector function, suggesting that PD-L1 blockade was sufficient to enhance CD8 T
cell effector function even in the absence of CD226. CD226 blockade also resulted in a
reduced frequency of tumor-infiltrating CD8 T cells (53% reduction, P = 0.0044, E-
28F). Taken together, these data suggested that CD226 functions to support both the
accumulation and effector function of tumor-infiltrating CD8 T cells, and that TIGIT
counteracts the latter.
Example 14: TIGIT impairs CD226 function by directly disrupting CD226
homodimerization
To test if TIGIT may antagonize CD226 activity in cis, TIGIT’s effect on CD226
co-stimulation in vitro was tested. TIGIT-deficient CD8 T cells stimulated with sub-optimal
levels of anti-CD3 responded more robustly to PVR co-stimulation than did wildtype
littermate CD8 T cells, and this enhanced response was dependent on CD226 (46% increase
in proliferation, P = 0.0061, A). Consistent with these data, wildtype CD8 T cells,
stimulated with sub-optimal anti-CD3 and PVR, proliferated more robustly in the presence of
anti-TIGIT antibodies than they did in the presence of isotype-matched control antibodies,
and this effect was also dependent on CD226 (105% increase in proliferation, P = 0.0010,
B).
To test the relevance of TIGIT to primary human CD8 T cells, we purified CD8 T
cells from healthy donor blood and stimulated them with sub-optimal levels of plate-bound
anti-CD3 and recombinant human PVR-Fc fusion protein. In the presence of isotype-
matched control antibodies, PVR co-stimulation moderately enhanced T cell stimulation and
proliferation. Furthermore, addition blocking anti-TIGIT antibodies significantly enhanced
the effects of PVR co-stimulation, consistent with TIGIT’s effects on primary murine CD8 T
cells (69% increase in proliferation, P = 0.0071, C). These data demonstrated a cell-
intrinsic role for TIGIT inhibition of CD226 function on primary murine and human CD8 T
cells.
TR-FRET (Time-resolved Fluorescence Resonance Energy Transfer) was used to
determine the molecular mechanism by which TIGIT impaired CD226 activity. First, we
expressed and labeled human ST-CD226 with non-permeant donor and acceptor
fluorophores. These cells yielded a strong FRET signal, confirming the ability of CD226 to
homodimerize (D). To monitor CD226 and TIGIT interactions on the cell surface, we
expressed ST-CD226 in absence or in presence of human HA-TIGIT that we labeled with the
SNAP-tag substrate and an anti-HA antibody, respectively. Strikingly, co-expression of
increasing amounts of TIGIT (monitored by ELISA) attenuated the CD226/CD226 FRET
signal, indicating that TIGIT could disrupt CD226 homodimerization (E). Indeed,
acceptor CD226 and donor TIGIT also resulted in a significant FRET signal, indicating a
direct interaction between these two proteins (F). This interaction was further
confirmed by co-immunoprecipitation (G). These data demonstrated that TIGIT and
CD226 directly interact at the cell surface, and that this interaction can impair CD226
homodimerization.
To test the effects of TIGIT antibody blockade on TIGIT-CD226 interaction, we
again co-expressed human ST-CD226 and HA-TIGIT, this time in the presence or absence of
blocking antibodies against human TIGIT. The addition of anti-TIGIT to the cell cultures
significantly reduced the ability of TIGIT and CD226 to associate (H). These data
suggested that anti-TIGIT treatment can limit TIGIT’s interaction with CD226, and are
consistent with the notion that suppression of CD226 activity is a key mechanism of action
by which TIGIT enforces CD8 T cell exhaustion. This is also consistent with the ability of
anti-TIGIT antibodies to enhance CD226 co-stimulation.
Next, we confirmed the capacity of endogenous TIGIT and CD226 to interact (). Primary human T cells were stimulated in vitro with anti-CD3 and anti-CD28 antibodies,
sorted on the basis of TIGIT expression, rested, re-stimulated, and labeled with antibodies
against endogenous TIGIT and CD226 that were conjugated to fluorophores compatible with
TR-FRET. TIGIT-expressing T cells labeled with donor-conjugated anti-TIGIT and
acceptor-conjugated anti-CD226 antibodies yielded a strong FRET signal (). In
contrast, only a negligible FRET signal was detected on T cells that did not express TIGIT or
that were labeled with donor-conjugated anti-TIGIT and acceptor-conjugated anti-HVEM
antibodies (), confirming the specificity of the detected interaction between
endogenous TIGIT and CD226.
These results demonstrate that endogenous TIGIT and CD226 can directly interact
at the cell surface, and that this interaction impairs CD226 homodimerization. Given the
role of CD226 as a co-stimulator of T cell responses in vivo, and without wishing to be bound
by theory, it is believed that suppression of CD226 may be a key mechanism of action by
which TIGIT enforces CD8 T cell exhaustion during chronic viral infection and cancer.
Materials and Methods
Time-resolved Fluorescence Resonance Energy Transfer with Transfected Cell
Lines. CHO cells were transfected with N-terminus SNAP-tagged (ST) CD226 and N-
terminus HA-TIGIT using Lipofectamine 2000 (Life Technologies) and seeded in a white 96-
well plate (Costar) at 100,000 cells per well. 24 hours later, cells were labeled to measure
TR-FRET either between SNAP-donor / SNAP-acceptor or between SNAP-acceptor / anti-
HA donor. 1) SNAP-donor / SNAP-acceptor labeling: Cells were incubated with 100 nM of
donor-conjugated benzyl- guanine SNAP-Lumi-4Tb (Cisbio) and 1 µM acceptor-conjugated
benzyl-guanine SNAP-A647 (New England Biolabs) diluted in DMEM 10% FCS for lh at
37°C, 5% CO . Cells were then washed three times in PBS before reading of the FRET
signal. 2) SNAP-acceptor/anti-HA donor: Cells were incubated with 1 µM acceptor-
conjugated benzyl-guanine SNAP-A647 diluted in DMEM 10% FCS for lh at 37°C, 5% CO .
After three washes in PBS, cells were incubated for 2 hours with 2 nM anti-HA Lumi-4Tb
(Cisbio) in PBS + 0.2% BSA at room temperature. The FRET signal was then recorded at
665 nm for 400 µs after a 60 µs delay following laser excitation at 343 nm using a Safire2
plate reader (Tecan). When anti-TIGIT was tested at 10µg/ml final, the FRET signal was also
recorded after a 15 min incubation. For the Flag-ST-CD226/Flag-ST-CD226 interaction, the
FRET ratio was calculated as the FRET intensity divided by the donor emission at 620 nm,
which is proportional to the CD226 expression. The FRET intensity being: (signal at 665 nm
from cells labeled with SNAP-donor and acceptor) - (signal at 665 nm from the same batch of
transfected cells labeled with SNAP-donor only). For the Flag-ST-CD226/HA-TIGIT
interaction, the FRET ratio represents the FRET intensity divided by the Flag-ST-CD226
expression as measured by an anti-Flag ELISA. In that case, the FRET intensity = (signal at
665 nm from cells labeled with SNAP-acceptor and anti-HA donor) - (signal at 665 nm from
mock transfected cells labeled with SNAP-acceptor and anti-HA donor).
Time-resolved Fluorescence Resonance Energy Transfer with Human T cells.
Human anti-TIGIT (Genentech clone 1F4), anti-CD226 (Santa Cruz Biotechnology), and
anti-HVEM (eBioscience) antibodies were conjugated fluorophores compatible with TR-
FRET (Cisbio). Primary human T cells were MACS-enriched from blood, stimulated in vitro
with plate bound anti-CD3 and anti-CD28 for 72 hours. TIGIT-expressing and non-
expressing T cells (all expressing CD226) were then sorted, rested without stimulation for 72
hours, and re-stimulated for 48 hours. Each population was then washed once with Tris-
KREBS buffer (20mM Tris pH 7.4, 118mM NaCl, 5.6mM glucose, 1.2mM KH2PO4, 1.2mM
MgSO4, 4.7mM KCl, 1.8mM CaCl2) and cultured under the following conditions, in
triplicate: 1) Anti-TIGIT Ab-Lumi4-Tb (5 µg/ml), 2) Anti-TIGIT Ab-Lumi4-Tb (5 µg/ml) +
anti-HVEM-d2 (10 µg/ml), 3) Anti-TIGIT Ab-Lumi4-Tb (5 µg/ml) + anti-CD226 (10 µg/ml),
4) Anti-TIGIT Ab-Lumi4-Tb (5 µg/ml) + anti-CD226 (10 µg/ml) + cold anti-TIGIT Ab
(clone 1F4) (50 µg/ml). The indicated concentrations were optimized to ensure the highest
FRET signal. Cells were incubated for 2 hours at room temperature on a rotator and then
washed 3 times in Tris-KREBS buffer. T cells were then seeded at 400,000 cells/well in a
white 96-well plate (Costar) and TR-FRET was recorded at 665 nm for 400 µs after a 60 µs
delay following laser excitation at 343 nm using a PHERAstar plate reader (BMG Labtech).
FRET intensity was expressed as the signal at 665 nm from cells labeled with Ab-Lumi4-Tb
+ Ab-d2 minus the signal at 665 nm from the same batch of cells labeled with Ab-Lumi4-Tb
alone. The non-specific FRET signal was given by the T cells incubated with Lumi4Tb + d2
+ an excess of cold Ab.
Co-immunoprecipitation. Briefly, COS 7 Cells in 15 cm plates were co-
transfected with expression plasmids containing the cDNA for either TIGIT-HA (5ng) or
CD226-Flag (10ng) tagged proteins, or a control plasmid (pRK). 23 hrs after transfection the
cells were washed with PBS and harvested in 4 ml of ice cold PBS and centrifuged at 300xg
for 5min and cell pellets were re-suspended in 2 ml of Lysis buffer at 4°C. The cells were
lysed over 50 min with vortexing every 15 min and subsequently centrifuged at 10,00xg for
min at 4ºC. The resultant supernatant was pre-cleared with 160 µl of CL6B sepahrose
slurry by rotating for 30 min at 4°C, and centrifuged for 2 min at 3000 x g. The supernatant
was equally split into two tubes and immuno-precipitated with either an anti-HA or an anti-
flag using standard procedures. The immune-precipitated proteins were subjected to SDS-
PAGE and western blotted. Western blots were probed with either anti-Flag-HRP or anti-HA-
HRP.
All patents, patent applications, documents, and articles cited herein are herein
incorporated by reference in their entireties.
[0472A] Certain statements that appear herein are broader than what appears in the
statements of the invention. These statements are provided in the interests of providing the
reader with a better understanding of the invention and its practice. The reader is directed to
the accompanying claim set which defines the scope of the invention.
Claims (113)
1. Use of a PD-1 axis binding antagonist in the manufacture of a medicament for treating or delaying progression of cancer in an individual, wherein the medicament is to be administered in combination with an anti-TIGIT antagonist antibody or antigen-binding fragment thereof, wherein the PD-1 axis binding antagonist is (1) an anti-PD-1 antagonist antibody or an antigen-binding fragment thereof; (2) an anti-PD-L1 antagonist antibody or an antigen-binding fragment thereof; or (3) an anti-PD-L2 antagonist antibody or an antigen- binding fragment thereof.
2. The use of claim 1, wherein the medicament is for reducing or inhibiting cancer relapse or cancer progression.
3. Use of an anti-TIGIT antagonist antibody or antigen-binding fragment thereof in the manufacture of a medicament for treating or delaying progression of cancer in an individual, wherein the medicament is to be administered in combination with a PD-1 axis binding antagonist, wherein the PD-1 axis binding antagonist is (1) an anti-PD-1 antagonist antibody or an antigen-binding fragment thereof; (2) an anti-PD-L1 antagonist antibody or an antigen- binding fragment thereof; or (3) an anti-PD-L2 antagonist antibody or an antigen-binding fragment thereof.
4. The use of claim 3, wherein the medicament is for reducing or inhibiting cancer relapse or cancer progression.
5. The use of any one of claims 1-4, wherein the medicament is to be further used in combination with at least one chemotherapeutic agent.
6. The use of any one of claims 1-5, wherein the individual has a cancer.
7. The use of any one of claims 1-5, wherein the individual is in remission.
8. The use of any one of claims 1-6, wherein the cancer has elevated levels of T cell infiltration.
9. The use of any one of claims 1–8, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the interaction of TIGIT with PVR, inhibits or blocks the interaction of TIGIT with PVRL2, inhibits or blocks the interaction of TIGIT with PVRL3, inhibits or blocks the intracellular signaling mediated by TIGIT binding to PVR, inhibits or blocks the intracellular signaling mediated by TIGIT binding to PVRL2, inhibits or blocks the intracellular signaling mediated by TIGIT binding to PVRL3, or a combination thereof.
10. The use of claim 9, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the interaction of TIGIT with PVR.
11. The use of claim 9, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the interaction of TIGIT with PVRL2.
12. The use of claim 9, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the interaction of TIGIT with PVRL3.
13. The use of claim 9, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the intracellular signaling mediated by TIGIT binding to PVR.
14. The use of claim 9, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the intracellular signaling mediated by TIGIT binding to PVRL2.
15. The use of claim 9, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof inhibits or blocks the intracellular signaling mediated by TIGIT binding to PVRL3.
16. The use of any one of claims 1-15, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof comprises at least one HVR comprising an amino acid sequence selected from the amino acid sequences (1) KSSQSLYYSGVKENLLA (SEQ ID NO: 1), ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ ID NO:3), GFTFSSFTMH (SEQ ID NO:4), FIRSGSGIVFYADAVRG (SEQ ID NO:5), and RPLGHNTFDS (SEQ ID NO:6); or (2) RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS (SEQ ID NO:8), LQGTHQPPT (SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO: 10), LIIPYNGGTSYNQKFKG (SEQ ID NO: 11), and GLRGFYAMDY (SEQ ID NO: 12).
17. The use of any one of claims 1-16, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof comprises a light chain comprising the amino acid sequence set forth in DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG TKLEIKR (SEQ ID NO:13) or DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ ID NO: 14).
18. The use of any one of claims 1-17, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof comprises a heavy chain comprising the amino acid sequence set forth in EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG TLVTVSS (SEQ ID NO: 15) or EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG TSVTVSS (SEQ ID NO: 16).
19. The use of any one of claims 1-18, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof comprises a light chain comprising the amino acid sequence set forth in DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG TKLEIKR (SEQ ID NO:13) or DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ ID NO: 14), and a heavy chain comprising the amino acid sequence set forth in EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG TLVTVSS (SEQ ID NO: 15) or EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG TSVTVSS (SEQ ID NO: 16).
20. The use of any one of claims 1-19, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof is selected from the group consisting of a human antibody, a humanized antibody, a chimeric antibody, a bispecific antibody, a heteroconjugate antibody, and an immunotoxin.
21. The use of any one of claims 1-15, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof comprises at least one HVR that is at least 90% identical to an HVR set forth in any one of (1) KSSQSLYYSGVKENLLA (SEQ ID NO: 1), ASIRFT (SEQ ID NO:2), QQGINNPLT (SEQ ID NO:3), GFTFSSFTMH (SEQ ID NO:4), FIRSGSGIVFYADAVRG (SEQ ID NO:5), and RPLGHNTFDS (SEQ ID NO:6); or (2) RSSQSLVNSYGNTFLS (SEQ ID NO:7), GISNRFS (SEQ ID NO:8), LQGTHQPPT (SEQ ID NO:9), GYSFTGHLMN (SEQ ID NO: 10), LIIPYNGGTSYNQKFKG (SEQ ID NO: 11), and GLRGFYAMDY (SEQ ID NO: 12).
22. The use of claim 21, wherein the anti-TIGIT antagonist antibody or fragment thereof comprises the light chain comprising amino acid sequences at least 90% identical to the amino acid sequences set forth in DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG TKLEIKR (SEQ ID NO:13) or DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ ID NO: 14).
23. The use of claim 21 or 22, wherein the heavy chain comprising amino acid sequences at least 90% identical to the amino acid sequences set forth in EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG TLVTVSS (SEQ ID NO: 15) or EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG TSVTVSS (SEQ ID NO: 16).
24. The use any one of claims 21-23, wherein the anti-TIGIT antagonist antibody or fragment thereof comprises the light chain comprising amino acid sequences at least 90% identical to the amino acid sequences set forth in DIVMTQSPSSLAVSPGEKVTMTCKSSQSLYYSGVKENLLAWYQQKPGQS PKLLIYYASIRFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGINNPLTFGDG TKLEIKR (SEQ ID NO:13) or DVVLTQTPLSLSVSFGDQVSISCRSSQSLVNSYGNTFLSWYLHKPGQSPQLLIFGISNR FSGVPDRFSGSGSGTDFTLKISTIKPEDLGMYYCLQGTHQPPTFGPGTKLEVK (SEQ ID NO: 14) and the heavy chain comprising amino acid sequences at least 90% identical to the amino acid sequences set forth in EVQLVESGGGLTQPGKSLKLSCEASGFTFSSFTMHWVRQSPGKGLEWVAFIRSGSGI VFYADAVRGRFTISRDNAKNLLFLQMNDLKSEDTAMYYCARRPLGHNTFDSWGQG TLVTVSS (SEQ ID NO: 15) or EVQLQQSGPELVKPGTSMKISCKASGYSFTGHLMNWVKQSHGKNLEWIGLIIPYNGG TSYNQKFKGKATLTVDKSSSTAYMELLSLTSDDSAVYFCSRGLRGFYAMDYWGQG TSVTVSS (SEQ ID NO: 16).
25. The use of any one of claims 3-23, wherein the anti-TIGIT antagonist antibody is an IgG antibody.
26. The use of claim 25, wherein the anti-TIGIT antagonist antibody is an IgG-1, an IgG- 2, an IgG2A, an IgG2B, an IgG-3 or an IgG-4 antibody.
27. The use of claim 25, wherein the anti-TIGIT antagonist antibody is an IgG-1 antibody.
28. The use of claim 25, wherein the anti-TIGIT antagonist antibody is an IgG-4 antibody.
29. The use of any one of claims 3-28, wherein the anti-TIGIT antagonist antibody is a monoclonal antibody.
30. The use of claim 29, wherein the anti-TIGIT antagonist antibody is a monoclonal human antibody.
31. The use of claim 29, wherein the anti-TIGIT antagonist antibody is a monoclonal humanized antibody.
32. The use of claim 30, wherein the anti-TIGIT antagonist antibody is a monoclonal human IgG1 antibody.
33. The use of claim 30, wherein the anti-TIGIT antagonist antibody is a monoclonal human IgG4 antibody.
34. The use of claim 31, wherein the anti-TIGIT antagonist antibody is a monoclonal humanized IgG1 antibody.
35. The use of claim 31, wherein the anti-TIGIT antagonist antibody is a monoclonal humanized IgG4 antibody.
36. The use of any one of claims 3-35, wherein the anti-TIGIT antagonist antibody has a modified effector function.
37. The use of claim 36, wherein the anti-TIGIT antagonist antibody has a reduced or minimal effector function.
38. The use of claim 37, wherein the anti-TIGIT antagonist antibody comprises an N297A or D265A/N297A substitution in the constant region.
39. The use of claim 36, wherein the modified effector function results in improved internalization capability, increased complement-mediated cell killing, or increased antibody- dependent cellular cytotoxicity.
40. The use of any one of claims 1-39, wherein the PD-1 axis binding antagonist is an anti-PD-1 antagonist antibody or antigen-binding fragment thereof.
41. The use of claim 40, wherein the anti-PD-1 antagonist antibody or antigen-binding fragment inhibits the binding of PD-1 to its ligand binding partners.
42. The use of claim 40 or 41, wherein the anti-PD-1 antagonist antibody or antigen- binding fragment inhibits the binding of PD-1 to PD-L1.
43. The use of claim 40 or 41, wherein the anti-PD-1 antagonist antibody or antigen- binding fragment inhibits the binding of PD-1 to PD-L2.
44. The use of claim 40 or 41, wherein the anti-PD-1 antagonist antibody or antigen- binding fragment inhibits the binding of PD-1 to both PD-L1 and PD-L2.
45. The use of any one of claims 1-44, wherein the PD-1 binding antagonist is an anti- PD-1 antagonist antibody.
46. The use of any one of claims 40-45, wherein the anti-PD-1 antagonist antibody is nivolumab (MDX-1106).
47. The use of any one of claims 40-45, wherein the anti-PD-1 antagonist antibody is lambrolizumab (MK-3475).
48. The use of any one of claims 40-47, wherein the anti-PD-1 antagonist antibody is an IgG antibody.
49. The use of claim 48, wherein the anti-PD-1 antagonist antibody is an IgG-1, an IgG-2, an IgG2A, an IgG2B, an IgG-3 or an IgG-4 antibody.
50. The use of claim 48, wherein the anti-PD-1 antagonist antibody is an IgG-1 antibody.
51. The use of claim 48, wherein the anti-PD-1 antagonist antibody is an IgG-4 antibody.
52. The use of any one of claims 40-51, wherein the anti-PD-1 antagonist antibody is a monoclonal antibody.
53. The use of claim 52, wherein the anti-PD-1 antagonist antibody is a monoclonal human antibody.
54. The use of claim 52, wherein the anti-PD-1 antagonist antibody is a monoclonal humanized antibody.
55. The use of claim 53, wherein the anti-PD-1 antagonist antibody is a monoclonal human IgG1 antibody.
56. The use of claim 53, wherein the anti-PD-1 antagonist antibody is a monoclonal human IgG4 antibody.
57. The use of claim 54, wherein the anti-PD-1 antagonist antibody is a monoclonal humanized IgG1 antibody.
58. The use of claim 54, wherein the anti-PD-1 antagonist antibody is a monoclonal humanized IgG4 antibody.
59. The use of any one of claims 40-58, wherein the anti-PD-1 antagonist antibody has a modified effector function.
60. The use of claim 59, wherein the anti-PD-1 antagonist antibody has a reduced or minimal effector function.
61. The use of claim 60, wherein the anti-PD-1 antagonist antibody comprises an N297A or D265A/N297A substitution in the constant region.
62. The use of claim 59, wherein the modified effector function results in improved internalization capability, increased complement-mediated cell killing, or increased antibody- dependent cellular cytotoxicity.
63. The use of any one of claims 1-39, wherein the PD-1 axis binding antagonist is an anti-PD-L1 antagonist antibody or an antigen-binding fragment thereof.
64. The use of claim 63, wherein the anti-PD-L1 antagonist antibody or antigen-binding fragment inhibits the binding of PD-L1 to PD-1.
65. The use of claim 63, wherein the anti-PD-L1 antagonist antibody or antigen-binding fragment inhibits the binding of PD-L1 to B7-1.
66. The use of claim 63, wherein the anti-PD-L1 antagonist antibody or antigen-binding fragment inhibits the binding of PD-L1 to both PD-1 and B7-1.
67. The use of any one of claims 63-66, wherein the PD-1 axis binding antagonist is an anti-PD-L1 antagonist antibody.
68. The use of any one of claims 63-67, wherein the anti-PD-L1 antagonist antibody is selected from the group consisting of MPDL3280A, MDX-1105, and MEDI4736.
69. The use of any one of claims 63-67, wherein the anti-PD-L1 antagonist antibody comprises a heavy chain comprising a HVR-H1 sequence of GFTFSDSWTH (SEQ ID NO: 17), a HVR-H2 sequence of AWISPYGGSTYYADSVKG (SEQ ID NO: 18), and a HVR-H3 sequence of RHWPGGFDY (SEQ ID NO: 19); and a light chain comprising a HVR-L1 sequence of RASQDVSTAVA (SEQ ID NO:20), a HVR-L2 sequence of SASFLYS (SEQ ID NO:21), and a HVR-L3 sequence of QQYLYHPAT (SEQ ID NO:22).
70. The use of any one of claims 63-69, wherein the anti-PD-L1 antagonist antibody is an IgG antibody.
71. The use of claims 70, wherein the anti-PD-L1 antagonist antibody is an IgG-1, an IgG-2, an IgG2A, an IgG2B, an IgG-3 or an IgG-4 antibody.
72. The use of claim 70, wherein the anti-PD-L1 antagonist antibody is an IgG-1 antibody.
73. The use of claim 70, wherein the anti-PD-L1 antagonist antibody is an IgG-4 antibody.
74. The use of any one of claims 63-73, wherein the anti-PD-L1 antagonist antibody is a monoclonal antibody.
75. The use of claim 74, wherein the anti-PD-L1 antagonist antibody is a monoclonal human antibody.
76 The use of claim 74, wherein the anti-PD-L1 antagonist antibody is a monoclonal humanized antibody.
77. The use of claim 75, wherein the anti-PD-L1 antagonist antibody is a monoclonal human IgG1 antibody.
78. The use of claim 75, wherein the anti-PD-L1 antagonist antibody is a monoclonal human IgG4 antibody.
79. The use of claim 76, wherein the anti-PD-L1 antagonist antibody is a monoclonal humanized IgG1 antibody.
80. The use of claim 76, wherein the anti-PD-L1 antagonist antibody is a monoclonal humanized IgG4 antibody.
81. The use of any one of claims 63-80, wherein the anti-PD-L1 antagonist antibody has a modified effector function.
82. The use of claim 81, wherein the anti-PD-L1 antagonist antibody has a reduced or minimal effector function.
83. The use of claim 82, wherein the anti-PD-L1 antagonist antibody comprises an N297A or D265A/N297A substitution in the constant region.
84. The use of claim 81, wherein the modified effector function results in improved internalization capability, increased complement-mediated cell killing, or increased antibody- dependent cellular cytotoxicity.
85. The use of any one of claims 1-39, wherein the PD-1 axis binding antagonist is an anti-PD-L2 antagonist antibody or an antigen-binding fragment thereof.
86. The use of claim 85, wherein the PD-1 axis binding antagonist is an anti-PD-L2 antagonist antibody.
87. The use of claim 85 or 86, wherein the anti-PD-L2 antagonist antibody is an IgG antibody.
88. The use of claim 87, wherein the anti-PD-L2 antagonist antibody is an IgG-1, an IgG- 2, an IgG2A, an IgG2B, an IgG-3 or an IgG-4 antibody.
89. The use of claim 87, wherein the anti-PD-L2 antagonist antibody is an IgG-1 antibody.
90. The use of claim 87, wherein the anti-PD-L2 antagonist antibody is an IgG-4 antibody.
91. The use of any one of claims 85-90, wherein the anti-PD-L2 antagonist antibody is a monoclonal antibody.
92. The use of claim 91, wherein the anti-PD-L2 antagonist antibody is a monoclonal human antibody.
93. The use of claim 91, wherein the anti-PD-L2 antagonist antibody is a monoclonal humanized antibody.
94. The use of claim 92, wherein the anti-PD-L2 antagonist antibody is a monoclonal human IgG1 antibody.
95. The use of claim 92, wherein the anti-PD-L2 antagonist antibody is a monoclonal human IgG4 antibody.
96. The use of claim 93, wherein the anti-PD-L2 antagonist antibody is a monoclonal humanized IgG1 antibody.
97. The use of claim 93, wherein the anti-PD-L2 antagonist antibody is a monoclonal humanized IgG4 antibody.
98. The use of any one of claims 85-97, wherein the anti-PD-L2 antagonist antibody has a modified effector function.
99. The use of claim 98, wherein the anti-PD-L2 antagonist antibody has a reduced or minimal effector function.
100. The use of claim 99, wherein the anti-PD-L2 antagonist antibody comprises an N297A or D265A/N297A substitution in the constant region.
101. The use of claim 98, wherein the modified effector function results in improved internalization capability, increased complement-mediated cell killing, or increased antibody- dependent cellular cytotoxicity.
102. The use of any one of claims 1-101, wherein the cancer is selected from the group consisting of a non-small cell lung cancer, a small cell lung cancer, a renal cell cancer, a colorectal cancer, an ovarian cancer, a breast cancer, a pancreatic cancer, a gastric carcinoma, a bladder cancer, an esophageal cancer, a mesothelioma, a melanoma, a head and neck cancer, a thyroid cancer, a sarcoma, a prostate cancer, a glioblastoma, a cervical cancer, a thymic carcinoma, a leukemia, a lymphomas, a myeloma, a mycosis fungoides, a Merkel cell cancer, and a hematologic malignancy.
103. The use of any one of claims 1-101, wherein the cancer is selected from the group consisting of a non-small cell lung cancer, a small cell lung cancer, a hepatocellular cancer, a renal cell cancer, a head and neck cancer, a colorectal cancer, a breast cancer, an esophageal cancer, a gastric carcinoma, a cervical cancer, an endometrial cancer, a bladder cancer, a melanoma, a lymphoma, and a Merkel cell cancer.
104. The use of claim 103, wherein the cancer is melanoma.
105. The use of claim 103, wherein the cancer is non-small cell lung cancer.
106. The use of any one of claims 1-101, wherein the cancer is a solid tumor.
107. The use of any one of claims 1-101, wherein the cancer is a hematologic malignancy.
108. The use of any one of claims 1-107, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof in the medicament is formulated for administration, or is to be administered continuously.
109. The use of any one of claims 1-107, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof in the medicament is formulated for administration, or is to be administered intermittently.
110. The use of any one of claims 1-109, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof in the medicament is formulated for administration, or is to be administered before the PD-1 axis binding antagonist.
111. The use of any one of claims 1-109, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof in the medicament is formulated for administration, or is to be administered simultaneous with the PD-1 axis binding antagonist.
112. The use of any one of claims 1-109, wherein the anti-TIGIT antagonist antibody or antigen-binding fragment thereof in the medicament is formulated for administration, or is to be administered after the PD-1 axis binding antagonist.
113. The use of any one of claims 1, 2, and 5-112 wherein the PD-1 axis binding antagonist is present in the medicament in an effective amount.
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NZ755387A NZ755387B2 (en) | 2013-07-16 | 2014-07-16 | Methods of treating cancer using pd-1 axis binding antagonists and tigit inhibitors |
NZ755389A NZ755389B2 (en) | 2013-07-16 | 2014-07-16 | Methods of treating cancer using pd-1 axis binding antagonists and tigit inhibitors |
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US201361846941P | 2013-07-16 | 2013-07-16 | |
US61/846,941 | 2013-07-16 | ||
US201361865582P | 2013-08-13 | 2013-08-13 | |
US61/865,582 | 2013-08-13 | ||
US201461950754P | 2014-03-10 | 2014-03-10 | |
US61/950,754 | 2014-03-10 | ||
US201461985884P | 2014-04-29 | 2014-04-29 | |
US61/985,884 | 2014-04-29 | ||
US201461992109P | 2014-05-12 | 2014-05-12 | |
US61/992,109 | 2014-05-12 | ||
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