NZ625073B2 - Disubstituted benzothienyl-pyrrolotriazines and their use as fgfr kinase inhibitors - Google Patents
Disubstituted benzothienyl-pyrrolotriazines and their use as fgfr kinase inhibitors Download PDFInfo
- Publication number
- NZ625073B2 NZ625073B2 NZ625073A NZ62507312A NZ625073B2 NZ 625073 B2 NZ625073 B2 NZ 625073B2 NZ 625073 A NZ625073 A NZ 625073A NZ 62507312 A NZ62507312 A NZ 62507312A NZ 625073 B2 NZ625073 B2 NZ 625073B2
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- New Zealand
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- kirstena
- annotation
- alkyl
- hydrogen
- formula
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- 239000003757 phosphotransferase inhibitor Substances 0.000 title abstract description 5
- SSTMBTQFNVRJDU-UHFFFAOYSA-N C1=CC=C2SC(C=3N=NNC4=CC=NC4=3)=CC2=C1 Chemical class C1=CC=C2SC(C=3N=NNC4=CC=NC4=3)=CC2=C1 SSTMBTQFNVRJDU-UHFFFAOYSA-N 0.000 title 1
- 150000001875 compounds Chemical class 0.000 claims abstract description 269
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims abstract description 124
- 201000011510 cancer Diseases 0.000 claims abstract description 36
- -1 chloro, methyl Chemical group 0.000 claims description 269
- 239000000203 mixture Substances 0.000 claims description 198
- 125000004178 (C1-C4) alkyl group Chemical group 0.000 claims description 100
- 229910052739 hydrogen Inorganic materials 0.000 claims description 90
- 239000001257 hydrogen Substances 0.000 claims description 90
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 claims description 62
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 60
- 239000011780 sodium chloride Substances 0.000 claims description 56
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims description 55
- UFHFLCQGNIYNRP-UHFFFAOYSA-N hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims description 53
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 40
- 125000005913 (C3-C6) cycloalkyl group Chemical group 0.000 claims description 34
- KDLHZDBZIXYQEI-UHFFFAOYSA-N palladium Chemical compound [Pd] KDLHZDBZIXYQEI-UHFFFAOYSA-N 0.000 claims description 33
- 125000001309 chloro group Chemical group Cl* 0.000 claims description 31
- 125000001424 substituent group Chemical group 0.000 claims description 31
- 125000000592 heterocycloalkyl group Chemical group 0.000 claims description 28
- 125000004432 carbon atoms Chemical group C* 0.000 claims description 27
- 150000003839 salts Chemical class 0.000 claims description 27
- 229910052757 nitrogen Inorganic materials 0.000 claims description 25
- 239000002585 base Substances 0.000 claims description 24
- 206010028980 Neoplasm Diseases 0.000 claims description 23
- 150000001412 amines Chemical class 0.000 claims description 21
- 239000012453 solvate Substances 0.000 claims description 20
- 239000002253 acid Substances 0.000 claims description 19
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 claims description 19
- 125000005842 heteroatoms Chemical group 0.000 claims description 19
- 125000001995 cyclobutyl group Chemical group [H]C1([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 claims description 18
- WSFSSNUMVMOOMR-UHFFFAOYSA-N formaldehyde Chemical compound O=C WSFSSNUMVMOOMR-UHFFFAOYSA-N 0.000 claims description 17
- 125000004043 oxo group Chemical group O=* 0.000 claims description 17
- 239000002904 solvent Substances 0.000 claims description 17
- 125000006582 (C5-C6) heterocycloalkyl group Chemical group 0.000 claims description 15
- 125000001153 fluoro group Chemical group F* 0.000 claims description 15
- 125000002950 monocyclic group Chemical group 0.000 claims description 15
- 125000003917 carbamoyl group Chemical group [H]N([H])C(*)=O 0.000 claims description 14
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 claims description 13
- 239000003054 catalyst Substances 0.000 claims description 13
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 claims description 13
- 229910052760 oxygen Inorganic materials 0.000 claims description 13
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims description 12
- 229910052799 carbon Inorganic materials 0.000 claims description 11
- 239000003795 chemical substances by application Substances 0.000 claims description 11
- 125000004093 cyano group Chemical group *C#N 0.000 claims description 11
- 239000003814 drug Substances 0.000 claims description 11
- 125000002485 formyl group Chemical group [H]C(*)=O 0.000 claims description 11
- 229910052763 palladium Inorganic materials 0.000 claims description 11
- 125000005476 oxopyrrolidinyl group Chemical group 0.000 claims description 10
- 230000002265 prevention Effects 0.000 claims description 10
- 125000000475 sulfinyl group Chemical group [*:2]S([*:1])=O 0.000 claims description 10
- 125000000229 (C1-C4)alkoxy group Chemical group 0.000 claims description 9
- 239000008194 pharmaceutical composition Substances 0.000 claims description 9
- XHXFXVLFKHQFAL-UHFFFAOYSA-N Phosphoryl chloride Chemical compound ClP(Cl)(Cl)=O XHXFXVLFKHQFAL-UHFFFAOYSA-N 0.000 claims description 8
- 229910020008 S(O) Inorganic materials 0.000 claims description 8
- 230000000875 corresponding Effects 0.000 claims description 7
- VSPXQZSDPSOPRO-UHFFFAOYSA-N pyrrolo[2,1-f][1,2,4]triazin-4-amine Chemical compound NC1=NC=NN2C=CC=C12 VSPXQZSDPSOPRO-UHFFFAOYSA-N 0.000 claims description 7
- 125000004429 atoms Chemical group 0.000 claims description 6
- 150000004677 hydrates Chemical class 0.000 claims description 6
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 5
- 239000003638 reducing agent Substances 0.000 claims description 5
- 229910052717 sulfur Inorganic materials 0.000 claims description 5
- 125000001246 bromo group Chemical group Br* 0.000 claims description 4
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 4
- PWEGVZDXTQLFLQ-UHFFFAOYSA-N dioxidoboron Chemical compound [O-][B][O-] PWEGVZDXTQLFLQ-UHFFFAOYSA-N 0.000 claims description 4
- 125000000842 isoxazolyl group Chemical group 0.000 claims description 4
- 125000001715 oxadiazolyl group Chemical group 0.000 claims description 4
- 125000004193 piperazinyl group Chemical group 0.000 claims description 4
- 150000007513 acids Chemical class 0.000 claims description 3
- 125000000217 alkyl group Chemical group 0.000 claims description 3
- 125000003754 ethoxycarbonyl group Chemical group C(=O)(OCC)* 0.000 claims description 3
- 125000002883 imidazolyl group Chemical group 0.000 claims description 3
- 238000004519 manufacturing process Methods 0.000 claims description 3
- 125000001160 methoxycarbonyl group Chemical group [H]C([H])([H])OC(*)=O 0.000 claims description 3
- 150000001732 carboxylic acid derivatives Chemical class 0.000 claims description 2
- 125000002346 iodo group Chemical group I* 0.000 claims description 2
- 239000000546 pharmaceutic aid Substances 0.000 claims description 2
- 125000004435 hydrogen atoms Chemical group [H]* 0.000 claims 24
- 125000004433 nitrogen atoms Chemical group N* 0.000 claims 7
- WDTPIXMABJCFMS-UHFFFAOYSA-N C1=CC=C2SC(OB[O-])=CC2=C1 Chemical compound C1=CC=C2SC(OB[O-])=CC2=C1 WDTPIXMABJCFMS-UHFFFAOYSA-N 0.000 claims 2
- 125000005243 carbonyl alkyl group Chemical group 0.000 claims 1
- 125000000876 trifluoromethoxy group Chemical group FC(F)(F)O* 0.000 claims 1
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 claims 1
- 102000027757 FGF receptors Human genes 0.000 abstract description 16
- 108091008101 FGF receptors Proteins 0.000 abstract description 16
- MOJSKEANAAMLIG-UHFFFAOYSA-N 4-[[4-amino-7-(ethoxymethyl)-5-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrrolo[2,1-f][1,2,4]triazin-6-yl]methyl]piperazin-2-one Chemical compound C=1C2=CC(C)=CC(OC)=C2SC=1C1=C2C(N)=NC=NN2C(COCC)=C1CN1CCNC(=O)C1 MOJSKEANAAMLIG-UHFFFAOYSA-N 0.000 abstract 2
- HNLRRJSKGXOYNO-UHFFFAOYSA-N 4-[[4-amino-6-(methoxymethyl)-5-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]methyl]piperazin-2-one Chemical compound N12N=CN=C(N)C2=C(C=2SC3=C(OC)C=C(C)C=C3C=2)C(COC)=C1CN1CCNC(=O)C1 HNLRRJSKGXOYNO-UHFFFAOYSA-N 0.000 abstract 1
- KVBXVOSVQPIXSL-UHFFFAOYSA-N 5-(1-benzothiophen-2-yl)pyrrolo[2,1-f][1,2,4]triazin-4-amine Chemical class C1=CC=C2SC(C=3C=CN4N=CN=C(C=34)N)=CC2=C1 KVBXVOSVQPIXSL-UHFFFAOYSA-N 0.000 abstract 1
- 239000000243 solution Substances 0.000 description 283
- XEKOWRVHYACXOJ-UHFFFAOYSA-N acetic acid ethyl ester Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 245
- OKKJLVBELUTLKV-UHFFFAOYSA-N methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 221
- 239000000543 intermediate Substances 0.000 description 214
- WEVYAHXRMPXWCK-UHFFFAOYSA-N acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 196
- BDAGIHXWWSANSR-UHFFFAOYSA-N formic acid Chemical compound OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 183
- YMWUJEATGCHHMB-UHFFFAOYSA-N methylene dichloride Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 174
- 238000004895 liquid chromatography mass spectrometry Methods 0.000 description 170
- WYURNTSHIVDZCO-UHFFFAOYSA-N tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 146
- QTBSBXVTEAMEQO-UHFFFAOYSA-N acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 136
- 238000005160 1H NMR spectroscopy Methods 0.000 description 123
- DTQVDTLACAAQTR-UHFFFAOYSA-N trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 107
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 89
- 238000004007 reversed phase HPLC Methods 0.000 description 87
- 235000019439 ethyl acetate Nutrition 0.000 description 81
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 76
- 235000019253 formic acid Nutrition 0.000 description 67
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 65
- 238000000746 purification Methods 0.000 description 64
- VEXZGXHMUGYJMC-UHFFFAOYSA-N HCl Chemical class Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 63
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 63
- 235000013350 formula milk Nutrition 0.000 description 61
- 239000000741 silica gel Substances 0.000 description 57
- 229910002027 silica gel Inorganic materials 0.000 description 57
- FAPWRFPIFSIZLT-UHFFFAOYSA-M sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 55
- 238000001704 evaporation Methods 0.000 description 53
- CSNNHWWHGAXBCP-UHFFFAOYSA-L mgso4 Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 52
- UIIMBOGNXHQVGW-UHFFFAOYSA-M NaHCO3 Chemical compound [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 46
- FYSNRJHAOHDILO-UHFFFAOYSA-N Thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 46
- 201000010099 disease Diseases 0.000 description 45
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 description 44
- 229910000041 hydrogen chloride Inorganic materials 0.000 description 44
- 239000012074 organic phase Substances 0.000 description 39
- 239000011541 reaction mixture Substances 0.000 description 39
- 238000004440 column chromatography Methods 0.000 description 38
- AGGHKNBCHLWKHY-UHFFFAOYSA-N sodium;triacetyloxyboron(1-) Chemical compound [Na+].CC(=O)O[B-](OC(C)=O)OC(C)=O AGGHKNBCHLWKHY-UHFFFAOYSA-N 0.000 description 38
- 239000000047 product Substances 0.000 description 37
- 238000003756 stirring Methods 0.000 description 36
- 238000000034 method Methods 0.000 description 34
- XKRFYHLGVUSROY-UHFFFAOYSA-N argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 32
- 238000006243 chemical reaction Methods 0.000 description 32
- NKLCNNUWBJBICK-UHFFFAOYSA-N Dess–Martin periodinane Chemical compound C1=CC=C2I(OC(=O)C)(OC(C)=O)(OC(C)=O)OC(=O)C2=C1 NKLCNNUWBJBICK-UHFFFAOYSA-N 0.000 description 30
- RTZKZFJDLAIYFH-UHFFFAOYSA-N diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 26
- 239000000706 filtrate Substances 0.000 description 26
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 26
- 235000019341 magnesium sulphate Nutrition 0.000 description 26
- 239000007787 solid Substances 0.000 description 26
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- 235000017557 sodium bicarbonate Nutrition 0.000 description 23
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- 230000002829 reduced Effects 0.000 description 22
- 239000003480 eluent Substances 0.000 description 21
- LWIHDJKSTIGBAC-UHFFFAOYSA-K Tripotassium phosphate Chemical compound [K+].[K+].[K+].[O-]P([O-])([O-])=O LWIHDJKSTIGBAC-UHFFFAOYSA-K 0.000 description 20
- 238000004108 freeze drying Methods 0.000 description 20
- MZRVEZGGRBJDDB-UHFFFAOYSA-N n-butyllithium Chemical compound [Li]CCCC MZRVEZGGRBJDDB-UHFFFAOYSA-N 0.000 description 20
- 238000002360 preparation method Methods 0.000 description 20
- HEMHJVSKTPXQMS-UHFFFAOYSA-M sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 18
- VLKZOEOYAKHREP-UHFFFAOYSA-N hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 17
- PMZURENOXWZQFD-UHFFFAOYSA-L na2so4 Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 17
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- 235000011152 sodium sulphate Nutrition 0.000 description 17
- 229910052786 argon Inorganic materials 0.000 description 16
- 150000002829 nitrogen Chemical group 0.000 description 16
- 239000012044 organic layer Substances 0.000 description 16
- PCLIMKBDDGJMGD-UHFFFAOYSA-N N-Bromosuccinimide Chemical compound BrN1C(=O)CCC1=O PCLIMKBDDGJMGD-UHFFFAOYSA-N 0.000 description 15
- CSCPPACGZOOCGX-UHFFFAOYSA-N acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 15
- 239000010410 layer Substances 0.000 description 15
- BDAGIHXWWSANSR-UHFFFAOYSA-M methanoate Chemical compound [O-]C=O BDAGIHXWWSANSR-UHFFFAOYSA-M 0.000 description 15
- 239000011347 resin Substances 0.000 description 15
- 229920005989 resin Polymers 0.000 description 15
- KEAYESYHFKHZAL-UHFFFAOYSA-N sodium Chemical compound [Na] KEAYESYHFKHZAL-UHFFFAOYSA-N 0.000 description 15
- 229910052708 sodium Inorganic materials 0.000 description 15
- 239000011734 sodium Substances 0.000 description 15
- BEOOHQFXGBMRKU-UHFFFAOYSA-N Sodium cyanoborohydride Chemical compound [Na+].[B-]C#N BEOOHQFXGBMRKU-UHFFFAOYSA-N 0.000 description 14
- 238000005349 anion exchange Methods 0.000 description 14
- XDTMQSROBMDMFD-UHFFFAOYSA-N cyclohexane Chemical compound C1CCCCC1 XDTMQSROBMDMFD-UHFFFAOYSA-N 0.000 description 14
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 14
- 239000002244 precipitate Substances 0.000 description 14
- VEXZGXHMUGYJMC-UHFFFAOYSA-M chloride anion Chemical compound [Cl-] VEXZGXHMUGYJMC-UHFFFAOYSA-M 0.000 description 13
- 238000004128 high performance liquid chromatography Methods 0.000 description 13
- 150000002431 hydrogen Chemical class 0.000 description 13
- 150000002500 ions Chemical class 0.000 description 13
- 239000008346 aqueous phase Substances 0.000 description 12
- 210000004027 cells Anatomy 0.000 description 12
- 239000012043 crude product Substances 0.000 description 12
- 125000005745 ethoxymethyl group Chemical group [H]C([H])([H])C([H])([H])OC([H])([H])* 0.000 description 12
- 229910000073 phosphorus hydride Inorganic materials 0.000 description 12
- BWHMMNNQKKPAPP-UHFFFAOYSA-L potassium carbonate Chemical compound [K+].[K+].[O-]C([O-])=O BWHMMNNQKKPAPP-UHFFFAOYSA-L 0.000 description 12
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 12
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- 230000035492 administration Effects 0.000 description 11
- 230000002401 inhibitory effect Effects 0.000 description 11
- XYFCBTPGUUZFHI-UHFFFAOYSA-N phosphine Chemical compound P XYFCBTPGUUZFHI-UHFFFAOYSA-N 0.000 description 11
- IWELDVXSEVIIGI-UHFFFAOYSA-N piperazin-2-one Chemical compound O=C1CNCCN1 IWELDVXSEVIIGI-UHFFFAOYSA-N 0.000 description 11
- XJHCXCQVJFPJIK-UHFFFAOYSA-M Caesium fluoride Chemical compound [F-].[Cs+] XJHCXCQVJFPJIK-UHFFFAOYSA-M 0.000 description 10
- RAXXELZNTBOGNW-UHFFFAOYSA-N Imidazole Chemical compound C1=CNC=N1 RAXXELZNTBOGNW-UHFFFAOYSA-N 0.000 description 10
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- QGZKDVFQNNGYKY-UHFFFAOYSA-N ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 10
- 229910000160 potassium phosphate Inorganic materials 0.000 description 10
- CDBYLPFSWZWCQE-UHFFFAOYSA-L sodium carbonate Chemical compound [Na+].[Na+].[O-]C([O-])=O CDBYLPFSWZWCQE-UHFFFAOYSA-L 0.000 description 10
- 235000019798 tripotassium phosphate Nutrition 0.000 description 10
- FVAUCKIRQBBSSJ-UHFFFAOYSA-M Sodium iodide Chemical compound [Na+].[I-] FVAUCKIRQBBSSJ-UHFFFAOYSA-M 0.000 description 9
- 239000008079 hexane Substances 0.000 description 9
- 239000012071 phase Substances 0.000 description 9
- 239000007858 starting material Substances 0.000 description 9
- 102000001253 Protein Kinases Human genes 0.000 description 8
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical class OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 8
- DHXVGJBLRPWPCS-UHFFFAOYSA-N THP Chemical compound C1CCOCC1 DHXVGJBLRPWPCS-UHFFFAOYSA-N 0.000 description 8
- 239000012300 argon atmosphere Substances 0.000 description 8
- 229960004132 diethyl ether Drugs 0.000 description 8
- 239000000463 material Substances 0.000 description 8
- SJRJJKPEHAURKC-UHFFFAOYSA-N n-methylmorpholine Chemical compound CN1CCOCC1 SJRJJKPEHAURKC-UHFFFAOYSA-N 0.000 description 8
- 230000002062 proliferating Effects 0.000 description 8
- 230000011664 signaling Effects 0.000 description 8
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- VRLDVERQJMEPIF-UHFFFAOYSA-N DBDMH Chemical compound CC1(C)N(Br)C(=O)N(Br)C1=O VRLDVERQJMEPIF-UHFFFAOYSA-N 0.000 description 7
- 108050007372 Fibroblast growth factor family Proteins 0.000 description 7
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- 239000008098 formaldehyde solution Substances 0.000 description 7
- 125000005931 tert-butyloxycarbonyl group Chemical group [H]C([H])([H])C(OC(*)=O)(C([H])([H])[H])C([H])([H])[H] 0.000 description 7
- QOSSAOTZNIDXMA-UHFFFAOYSA-N Carbodicyclohexylimide Chemical compound C1CCCCC1N=C=NC1CCCCC1 QOSSAOTZNIDXMA-UHFFFAOYSA-N 0.000 description 6
- AKHNMLFCWUSKQB-UHFFFAOYSA-L Sodium thiosulphate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=S AKHNMLFCWUSKQB-UHFFFAOYSA-L 0.000 description 6
- FPGGTKZVZWFYPV-UHFFFAOYSA-M Tetra-n-butylammonium fluoride Chemical compound [F-].CCCC[N+](CCCC)(CCCC)CCCC FPGGTKZVZWFYPV-UHFFFAOYSA-M 0.000 description 6
- 239000000460 chlorine Substances 0.000 description 6
- NXQGGXCHGDYOHB-UHFFFAOYSA-L cyclopenta-1,4-dien-1-yl(diphenyl)phosphane;dichloropalladium;iron(2+) Chemical compound [Fe+2].Cl[Pd]Cl.[CH-]1C=CC(P(C=2C=CC=CC=2)C=2C=CC=CC=2)=C1.[CH-]1C=CC(P(C=2C=CC=CC=2)C=2C=CC=CC=2)=C1 NXQGGXCHGDYOHB-UHFFFAOYSA-L 0.000 description 6
- 230000000694 effects Effects 0.000 description 6
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- WMFOQBRAJBCJND-UHFFFAOYSA-M lithium hydroxide Chemical compound [Li+].[OH-] WMFOQBRAJBCJND-UHFFFAOYSA-M 0.000 description 6
- 239000003921 oil Substances 0.000 description 6
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- 239000001184 potassium carbonate Substances 0.000 description 6
- 229910000027 potassium carbonate Inorganic materials 0.000 description 6
- JUJWROOIHBZHMG-UHFFFAOYSA-N pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 6
- 108091007921 receptor tyrosine kinases Proteins 0.000 description 6
- PXIPVTKHYLBLMZ-UHFFFAOYSA-N sodium azide Chemical compound [Na+].[N-]=[N+]=[N-] PXIPVTKHYLBLMZ-UHFFFAOYSA-N 0.000 description 6
- 235000019345 sodium thiosulphate Nutrition 0.000 description 6
- ZMANZCXQSJIPKH-UHFFFAOYSA-N triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 6
- 238000004704 ultra performance liquid chromatography Methods 0.000 description 6
- HNJBEVLQSNELDL-UHFFFAOYSA-N 2-Pyrrolidone Chemical compound O=C1CCCN1 HNJBEVLQSNELDL-UHFFFAOYSA-N 0.000 description 5
- 238000006646 Dess-Martin oxidation reaction Methods 0.000 description 5
- 238000007792 addition Methods 0.000 description 5
- 125000003277 amino group Chemical group 0.000 description 5
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 description 5
- 201000009030 carcinoma Diseases 0.000 description 5
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- KFZMGEQAYNKOFK-UHFFFAOYSA-N iso-propanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 5
- 230000000155 isotopic Effects 0.000 description 5
- 239000003446 ligand Substances 0.000 description 5
- RFIOZSIHFNEKFF-UHFFFAOYSA-M piperazine-1-carboxylate Chemical compound [O-]C(=O)N1CCNCC1 RFIOZSIHFNEKFF-UHFFFAOYSA-M 0.000 description 5
- 102000027656 receptor tyrosine kinases Human genes 0.000 description 5
- VMHLLURERBWHNL-UHFFFAOYSA-M sodium acetate Chemical compound [Na+].CC([O-])=O VMHLLURERBWHNL-UHFFFAOYSA-M 0.000 description 5
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- 235000017281 sodium acetate Nutrition 0.000 description 5
- 239000001187 sodium carbonate Substances 0.000 description 5
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- C07D—HETEROCYCLIC COMPOUNDS
- C07D487/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
- C07D487/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
- C07D487/04—Ortho-condensed systems
Abstract
Provided are disubstituted 5-(1-benzothiophen-2-yl) pyrrolo[2,1-f][1,2,4]triazin-4-amine compounds of the general formula (I), wherein the variables are as defined in the specification. Examples of the compounds include 4-{[4-Amino-6-(methoxymethyl)-5-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrrolo[2,1-f][1,2,4]triazin-7-yl]methyl} piperazin-2-one and 4-{[ 4-Amino-7-(ethoxymethyl)-5-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrrolo[2,1-f][1,2,4]triazin-6-yl]methyl} piperazin-2-one. The compounds are FGFR kinase inhibitors. The compounds may be useful in the treatment of cancer. o[2,1-f][1,2,4]triazin-7-yl]methyl} piperazin-2-one and 4-{[ 4-Amino-7-(ethoxymethyl)-5-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrrolo[2,1-f][1,2,4]triazin-6-yl]methyl} piperazin-2-one. The compounds are FGFR kinase inhibitors. The compounds may be useful in the treatment of cancer.
Description
DISUBSTITUTED BENZOTHIENYL - PYRROLOTRIAZINES AND THEIR
USE AS FGFR KINASE INHIBITORS
This invention relates to novel substituted 5—(1-benzothiophen—2-yl)pyrrolo[2,l-f][1,2,4]triazin
amine derivatives having protein tyrosine kinase tory activities, to processes for the ation
of such compounds, to pharmaceutical compositions containing such compounds, and to the use of
such compounds or itions for treating proliferative disorders, in particular cancer and tumor
diseases.
Cancer is a leading cause of death worldwide and accounted for 7.6 million deaths d 13% of
all deaths) in 2008. Deaths from cancer are projected to continue to rise worldwide to over
1 1 million in 2030 (WHO source, Fact Sheet No. 297, February 2011).
10 There are many ways how cancers can arise which is one of the reasons why their therapy is diffi-
cult. One way that transformation of cells can occur is following a genetic alteration. The completion
of the human genome project showed genomic instability and heterogeneity of human cancer genes.
Recent strategies to identify these genetic alterations sped up the s of cancer-gene discovery.
Gene abnormality can, for instance, lead to the overexpression of proteins, and hence to a non-
15 physiological activation of these proteins. One family of proteins from which a number of onco—
proteins derive are tyrosine kinases and in ular receptor tyrosine kinases (RTKs). In the past
two decades, numerous avenues of research have demonstrated the importance of RTK-mediated
ling in adverse cell growth leading to cancer. In recent years, promising results have been
ed in the clinic with selective small-molecule inhibitors of tyrosine kinases as a new class of
20 anti-tumorigenic agents [Swinney and Anthony, Nature Rev. Drug Disc. 10 (7), 9 (2011)].
Fibroblast growth factors (FGFs) and their receptors (FGFRs) form part of a unique and diverse
signalling system which plays a key role in a variety of biological processes which ass
various aspects of embryonic pment and adult pathophysiology [Itoh and Ornitz, J. Biochem.
149 (2), 121-130 (2011)]. In a spatio-temporal manner, FGFs stimulate h FGFR binding a
25 wide range of cellular functions including migration, proliferation, differentiation, and survival.
The FGF family ses 18 secreted polypeptidic growth factors that bind to four highly con-
served receptor tyrosine kinases (FGFR-l to —4) expressed at the cell surface. In addition, FGFR-5
can bind to FGFs but does not have a kinase domain, and therefore is devoid of intracellular signal-
ling. The specificity of the ligand/receptor interaction is enhanced by a number of transcriptional and
30 translational processes which give rise to multiple isoforms by alternative transcriptional initiation,
ative splicing, and C-terminal truncations. Various heparan sulfate proteoglycans (e.g.
ans) can be part of the FGF/FGFR complex and strongly influence the ability of FGFs to
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induce ling responses [Polanska et al., Developmental Dynamics 238 (2), 277-293 (2009)].
FGFRs are cell surface receptors consisting of three extracellular immunoglobulin—like domains, a
single-pass transmembrane domain, and an intracellular dimerized tyrosine kinase domain. Binding
of FGF bring the intracellular kinases into close proximity, enabling them to transphosphorylate each
other. Seven phosphorylation sites have been identified (e.g., in FGFR-l Tyr463, Tyr583, ,
Tyr653, Tyr654, , and Tyr766).
Some of these phosphotyrosine groups act as docking sites for downstream signalling molecules
which themselves may also be directly phosphorylated by FGFR, leading to the activation of
multiple signal transduction pathways. Thus, the MAPK signalling cascade is ated in cell
10 growth and differentiation, the PI3K/Akt signalling cascade is involved in cell survival and cell fate
ination, while the PI3K and PKC signalling cascades have a function in the l of cell
polarity. Several feedback tors of FGF signalling have now been identified and include
members of the Spry (Sprouty) and Sef (similar expression to FGF) families. Additionally, in certain
conditions, FGFR is released from pre-Golgi membranes into the cytosol. The receptor and its
15 ligand, FGF-2, are co-transported into the s by a mechanism that involves importin, and are
engaged in the CREE-binding protein (CBP) complex, a common and essential transcriptional co—
activator that acts as a gene activation gating factor. Multiple correlations between the immuno-
histochemical expression of FGF-2, FGFR—1 and FGFR-2 and their cytoplasmic and nuclear tumor
cell localizations have been ed. For instance, in lung adenocarcinomas this association is also
20 found at the r level, emphasizing an active role of the complex at the nucleus [Korc and
Friesel, Carr. Cancer Drags Targets 5, 639-651 (2009)].
FGFs are widely expressed in both developing and adult tissues and play important roles in a y
of normal and ogical processes, including tissue development, tissue regeneration, angio-
s, stic transformation, cell migration, ar differentiation, and cell survival.
25 Additionally, FGFs as pro-angiogenic s have also been implicated in the ng phenomenon
of resistance to ar endothelial growth factor receptor-2 (VEGFR-2) inhibition [Bergers and
Hanahan, Nat. Rev. Cancer 8, 592-603 (2008)].
Recent oncogenomic profiles of signalling networks demonstrated an important role for aberrant
FGF signalling in the emergence of some common human cancers [Wesche et al., Biochem. J. 437
30 (2), 199-213 (2011)]. Ligand-independent FGFR constitutive signalling has been described in many
human cancers, such as brain cancer, head and neck cancer, gastric cancer and ovarian cancer.
gR—mutated forms as well as FGFR—intragenic translocations have been identified in
gnancies such as myeloproliferative diseases. Interestingly, the same mutations discovered to be
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the cause of many developmental disorders are also found in tumor cells (e.g., the mutations found in
achondroplasia and thanatophoric sia, which cause dimerization and thus constitutive
activation of FGFR-3, are also frequently found in bladder cancer). A mutation that promotes
dimerization is just one mechanism that can increase ligand-independent signalling from FGFRs.
Other mutations located inside or outside of the kinase domain of FGFRs can change the
conformation of the domain giving rise to permanently active kinases.
Amplification of the chromosomal region 8p11—12, the genomic location of FGFR-I , is a common
focal amplification in breast cancer and occurs in approximately 10% of breast cancers, predomi—
nantly in oestrogen receptor-positive cancers. FGFR-1 amplifications have also been reported in non-
10 small cell lung us carcinoma and are found at a low incidence in ovarian cancer, bladder
cancer and rhabdomyosarcoma. Similarly, approximately 10% of gastric cancers show FGFR-2
amplification, which is associated with poor prognosis, diffuse-type cancers. Moreover, multiple
single nucleotide polymorphisms (SNPs) located in FGFR-l to -4 were found to ate with an
increased risk of developing ive cancers, or were reported to be associated with poor prognosis
15 (e.g., FGFR-4 G388R allele in breast cancer, colon cancer and lung adenocarcinoma). The direct
role of these SNPs to promote cancer is still controversial.
In y, a great number of in vitro and in vivo studies have been performed that validate
FGFR-l to -4 as important cancer targets, and comprehensive reviews have summarized these
findings [see, for example, Heinzle et al., Expert Opin. Ther. Targets 15 (7), 829-846 (2011);
20 Wesche et al., Biochem. J. 437 (2), 199-213 (2011); Greulich and Pollock, Trends in Molecular
Medicine 17 (5), 283-292 (2011); Haugsten et al., M01. Cancer Res. 8 (11), 1439-1452 (2010)].
Several strategies have been followed to attenuate aberrant FGFR-l to -4 signalling in human tumors
including blocking antibodies and small-molecule tors, amongst others. A number of selective
small—molecule FGFR inhibitors are currently in al development, such as AZD-4547 —
25 Zeneca) and BIG-398 (Novartis).
Notwithstanding the significant advancements that have generally been ed in cancer therapy in
recent years, there is a uing need to identify new anti-cancer compounds with improved
properties, such as higher potency, greater selectivity, d toxicity and/or better tolerability.
Therefore, the technical m to be solved according to the present invention may be seen in pro-
30 viding alternative nds having inhibitory ty on the FGFR kinases, thus offering new
therapeutic options for the ent of ediated diseases, in particular cancer and other pro-
bative disorders.
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Fused hetero-5,6-bicyclic kinase tors bearing a 9- or a 10-membered bicyclic heteroaryl
substituent have been sed in WC 2007/061737-A2 and WO 2005/097800—Al, respectively.
These compounds were stated to be useful for the treatment of cancer and other diseases owing to
their inhibitory action on the mTOR (mammalian target of Rapamycin) and/or lGF-lR (typel
insulin-like growth factor receptor) kinases. Further hetero-5,6-bicyclic template structures asso-
ciated with the inhibition of kinases have been described in, inter alia, WO 01/19828-A2,
WO 2007/079164-A2 and WO 2010/051043—A1.
4—Aminopyrrolo[2,1-f][l,2,4]triazine derivatives with differing inhibition profiles against a number
of protein kinases have been disclosed in, inter alia, WO 00/71129-A1, WO 2007/0561?0-A2,
10 W0 2007/061882-A2, WO 2007/064932—A2, W0 2009/136966-A1, and WO 2010/126960—A1.
In WO 2005/121147-Al, WO 2007/064883—A2 and WO 2007/06493l-A2, opyrrolo[2,l-f]—
[1,2,4]triazine derivatives containing a substituted diarylurea group in 5-position were described as
having FGFR-l inhibiting activity. However, other receptor tyrosine kinases, y the VEGFR,
PDGFR and Tie-2 kinases, are also significantly inhibited by this particular class of compounds. As
15 it was hypothesized that such multi-kinase activity might lead to an augmentation of potential side
effects during treatment, it was the aim of the present invention to identify new agents having an
improved selectivity for the FGFR kinases, thus providing new s for a more tolerable cancer
y.
Surprisingly, it has now been found that certain 4-aminopyrrolo[2,l-f][l,2,4]triazine derivatives
20 bearing a specifically tuted benzothiophen—Z-yl e in 5-position exhibit potent and selec-
tive tion of FGFR kinases, notably of the FGFR-l and FGFR-3 kinases, which renders these
compounds particularly useful for the treatment of proliferative disorders, such as cancer and tumor
es.
Thus, in one aspect, the present invention relates to 6,7-disubstituted 5-(1-benzothiophenyl)-
25 pyrrolo[2, l -f] [l ,2,4]triazin—4-amine derivatives of the general formula (I)
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(I),
wherein
R1 is hydrogen, chloro, methyl or methoxy,
R2 is hydrogen or y,
with the proviso that at least one of R1 and R2 is other than hydrogen,
represents , (C1-C4)-alkyl, (C1-C4)-alkoxycarbonyl, 5-membered teroaryl, or the
group -CH2-OR3, -CH2—NR4R5 or —C(=O)—NR4R6, wherein
R3 is hydrogen, (C1-C4)-alkyl, (C3—C6)-cycloalkyl or phenyl, wherein
(i) said (C1-C4)-alkyl is optionally substituted with hydroxy, (C1-C4)-alkoxy,
10 hydroxycarbonyl, (C1—C4)-alkoxycarbonyl, amino, arninocarbonyl, mono-
)-alkylaminocarbonyl, di-(C1-C4)-alkylaminocarbonyl, (C3—C6)—cycloalkyl
or up to three fluoro atoms,
and
(ii) said (C3-C6)-cycloalkyl is optionally substituted with one or two substituents
15 independently selected from the group consisting of (C1-C4)-alkyl, hydroxy and
amino,
and
(iii) said phenyl is optionally substituted with one or two substituents independently
selected from the group consisting of fluoro, chloro, bromo, cyano, trifluoro-
20 , romethoxy, (C1-C4)-alky1 and (C1-C4)-alkoxy,
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is hydrogen or (C1-C4)-a]kyl,
is hydrogen, (C1-C4)-alkyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 4- to 6-
ed heterocycloalkyl, wherein
(Z) said (C1-C4)-alkyl is optionally substituted with hydroxy, (C1-C4)-alkoxy,
hydroxycarbonyl, (C1-C4)—alkoxycarbonyl, arbonyl, Cl—C4)-alkyl-
arninocarbonyl, —C4)—alkylaminocarbonyl or (C3-C6)-cycloalkyl,
and
(ii) said (C3-C6)-cycloalkyl is optionally substituted with one or two substituents
independently selected from the group consisting of (C1-C4)-alkyl, hydroxy and
10 amino,
and
(iii) said 4- to 6-membered heterocycloalkyl is optionally tuted with one or
two substituents independently selected from the group consisting of (C1-C4)-
alkyl, hydroxy, 0x0 and amino,
15 is hydrogen, (C1-C4)-alky1, (C3—C6)-cycloalkyl or 4- to 6-membered heterocycloalkyl,
wherein
(Z) said (C1-C4)-alkyl is optionally substituted with hydroxy, (C1-C4)-alkoxy,
hydroxycarbonyl, (C1—C4)-alkoxycarbonyl, amino, arninocarbonyl, mono-
(C1-C4)-alkylarninocarbonyl, di-(C1-C4)-alkylaminocarbonyl or (C3—C6)—cyclo-
20 alkyl,
and
(ii) said (C3-C6)-cycloalkyl is ally substituted with one or two substituents
independently selected from the group consisting of (C1-C4)-alkyl, hydroxy and
amino,
25 and
(iii) said 4- to 6-membered heterocycloalkyl is optionally tuted with one or
two substituents independently selected from the group consisting of (C1-C4)-
alkyl, hydroxy, oxo and amino,
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01‘
R4 and R5, or R4 and R6, respectively, are joined and, taken together with the nitrogen atom
to which they are attached, form a monocyclic, saturated 4- to 7-membered hetero-
cycloalkyl ring which may contain a second ring heteroatom selected from N(R7)
5 and O, and which may be substituted on ring carbon atoms with one or two sub-
stituents independently selected from the group consisting of )—alkyl, 0X0,
y, amino and arbonyl, and wherein
R7 is hydrogen, (C1-C4)-alkyl, formyl or (C1-C4)-alkylcarbonyl,
and
10 G2 represents chloro, cyano, (C1-C4)-alkyl, or the group -CR8AR8B-OH, -CH2—NR9R1°,
-C(=O)-NR11R12 or -CH2-OR15, wherein
R8A and R813 are independently selected from the group consisting of hydrogen, (C1—C4)—alkyl,
cyclopropyl and cyclobutyl,
is hydrogen or (C1-C4)-alkyl,
15 is en, (C1-C4)-alkyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 4- to 6-
membered cycloalkyl, wherein
(i) said (C1-C4)-alkyl is optionally substituted with hydroxy, amino, aminocarbo-
nyl, mono-(C1-C4)-alkylaminocarbonyl or di-(C1-C4)-alkylaminocarbonyl,
and
20 (ii) said (C3-C5)-cycloalkyl is optionally substituted with one or two substituents
ndently selected from the group consisting of (C1-C4)—alkyl, hydroxy and
amino,
and
(iii) said 4- to ered heterocycloalkyl is optionally substituted with one or
25 two substituents independently selected from the group consisting of (C1—C4)-
alkyl, hydroxy, oxo and amino,
is hydrogen or (C1-C4)-alkyl,
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_ 8 _
is hydrogen, (C1-C4)-alkyl, )-cycloalkyl or 4- to 6-membered heterocycloalkyl,
wherein
(i) said (C1-C4)-alkyl is optionally substituted with y, amino, aminocarbo-
nyl, mono-(C1-C4)-alkylaminocarbonyl or di-(C1-C4)-alkylaminocarbonyl,
and
(ii) said (C3-C6)-cycloalkyl is ally substituted with one or two substituents
independently ed from the group consisting of (C1-C4)-alkyl, hydroxy and
amino,
and
10 (iii) said 4- to 6-membered heterocycloalkyl is optionally substituted with one or
two substituents independently selected from the group ting of (C1-C4)-
alkyl, hydroxy, oxo and amino,
01'
R9 and R10, or R11 and R12, respectively, are joined and, taken together with the nitrogen
15 atom to which they are attached, form a monocyclic, ted 4- to 7—membered
heterocycloalkyl ring which may contain a second ring heteroatom selected from
N(R13), O, S and S(O)2, and which may be substituted on ring carbon atoms with up
to three substituents independently selected from the group consisting of fluoro, (C1-
C4)-alkyl, 0X0, hydroxy, amino and arbonyl, and wherein
20 R13 is hydrogen, (C1—C4)—alkyl, (C3-C6)-cycloalkyl, formyl or (C1—C4)—alkyl—
carbonyl,
and
R15 is (C1-C4)-alkyl,
with the proviso that G1 is not chloro when G2 is chloro or cyano.
25 The compounds according to this invention can also be present in the form of their salts, solvates
and/or solvates of the salts.
D
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Compounds according to the invention are the compounds of the formula (I) and their salts, solvates
and solvates of the salts, the compounds included in the formula (I) of the ae (l—A), (LB), (1-
C), (I-D) and (I-E) mentioned in the following and their salts, solvates and solvates of the salts, and
the compounds ed in the formula (I) and mentioned in the following as process products and/or
embodiment examples and their salts, solvates and solvates of the salts, where the compounds
included in the formula (I) and mentioned in the following are not already salts, solvates and solvates
ofthe salts.
Sa_lts for the purposes ofthe present invention are preferably ceutically acceptable salts ofthe com—
pounds according to the invention (for example, see S. M. Berge er al., "Pharmaceutical , J.
10 Pharm. Sci. 1977, 66, 1-19). Salts which are not lves suitable for pharmaceutical uses but
can be used, for example, for isolation or purification of the compounds ing to the invention
are also included.
Pharmaceutically acceptable salts include acid addition salts of mineral acids, carboxylic acids and
sulfonic acids, for example salts of hydrochloric acid, hydrobromic acid, sulfuric acid, phosphoric
15 acid, methanesulfonic acid, ethanesulfonic acid, benzenesulfonic acid, toluenesulfonic acid,
naphthalenedisulfonic acid, formic acid, acetic acid, trifluoroacetic acid, nic acid, lactic acid,
tartaric acid, malic acid, citric acid, fumaric acid, maleic acid, and benzoic acid.
Pharmaceutically acceptable salts also e salts of ary bases, such as for example and
preferably alkali metal salts (for example sodium and potassium salts), alkaline earth metal salts (for
20 example calcium and magnesium salts), and ammonium salts derived from ammonia or organic
amines, such as illustratively and preferably ethylamine, lamine, triethylamine, N,N—diiso-
propylethylamine, monoethanolamine, diethanolamine, triethanolamine, dimethylaminoethanol,
diethylaminoethanol, ne, dicyclohexylamine, dibenzylamine, N—methylmorpholine, N—
methylpiperidine, arginine, lysine, and 1,2-ethylenediamine.
25 Solvates in the context of the invention are ated as those forms of the compounds according to
the invention which form a complex in the solid or liquid state by stoichiometric coordination with
solvent les. Hydrates are a specific form of es, in which the coordination takes place
with water. Hydrates are preferred solvates in the context of the present invention.
The compounds of this invention may, either by nature of asymmetric centers or by restricted
30 rotation, be present in the form of isomers (enantiomers, diastereomers). Any isomer may be present
Dhich the asymmetric center is in the (R)-, (S), or (R,S)-configuration.
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It will also be appreciated that when two or more asymmetric centers are present in the compounds
of the invention, several diastereomers and enantiomers of the exemplified structures Will often be
le, and that pure diastereomers and pure omers represent preferred ments. It is
intended that pure stereoisomers, pure diastereomers, pure enantiomers, and mixtures thereof, are
within the scope of the invention.
Geometric s by nature of substituents about a double bond or a ring may be present in cis
(= Z—) or trans (= E—) form, and both ic forms are encompassed within the scope of this
invention.
All isomers, whether separated, pure, partially pure, or in racemic mixture, of the compounds of this
10 invention are encompassed within the scope of this ion. The purification of said isomers and
the separation of said isomeric mixtures may be accomplished by standard techniques known in the
art. For example, diastereomeric mixtures can be separated into the individual isomers by chromato-
graphic processes or crystallization, and racemates can be separated into the respective enantiomers
either by chromatographic processes on chiral phases or by tion.
15 In addition, all possible tautomeric forms of the compounds described above are included according
to the present invention.
The present ion also asses all suitable isotopic variants of the compounds according to
the invention. An isotopic variant of a compound according to the invention is tood to mean a
compound in which at least one atom within the compound according to the invention has been
20 exchanged for another atom of the same atomic number, but with a different atomic mass than the
atomic mass which usually or predominantly occurs in nature. Examples of isotopes which can be
incorporated into a compound ing to the invention are those of hydrogen, carbon, nitrogen,
oxygen, fluorine, chlorine, bromine and iodine, such as 2H (deuterium), 3H (tritium), 13C, 14C, 15N,
”O, 18’O, 18’F, 36Cl, 82Br, 1231, 124I, 129I and 1311. Particular isotopic variants of a compound according
25 to the invention, especially those in which one or more radioactive isotopes have been incorporated,
may be beneficial, for example, for the examination of the mechanism of action or of the active
compound distribution in the body. Due to comparatively easy preparability and detectability,
especially compounds labelled with 3H or 14C isotopes are suitable for this purpose. In addition, the
incorporation of isotopes, for example of deuterium, can lead to particular eutic benefits as a
30 consequence of greater metabolic stability of the compound, for example an extension of the half-life
in the body or a reduction in the active dose required. Such modifications of the compounds
Drding to the invention may ore in some cases also constitute a preferred ment of the
present ion. Isotopic ts of the compounds according to the invention can be prepared by
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processes known to those skilled in the art, for example by the methods described below and the
methods described in the working examples, by using corresponding isotopic ations of the
particular reagents and/or starting compounds therein.
In the context of the present invention, the tuents and residues have the following meaning,
unless specified otherwise:
1C1—C4)-Allgvl in the context of the invention represents a straight-chain or ed alkyl radical
having 1 to 4 carbon atoms. There may be mentioned by way of example and preferably: methyl,
ethyl, n-propyl, isopropyl, n-butyl, iso-butyl, sec-butyl, and tert-butyl.
)-Alkoxy in the context of the invention represents a straight-chain or branched alkoxy radical
10 having 1 to 4 carbon atoms. There may be mentioned by way of example and preferably: methoxy,
ethoxy, n-propoxy, isopropoxy, n-butoxy, toxy, sec-butoxy, and tert—butoxy.
Mono-1C1-C42-allgylamino in the context of the invention represents an amino group with a straight-
chain or branched alkyl substituent Which contains 1 to 4 carbon atoms. There may be mentioned by
way of example and preferably: methylamino, ethylamino, n-propylamino, isopropylamino, n—
15 butylamino, and tert-butylamino.
-C4)-allgylamino in the context of the invention ents an amino group with two identical
or different ht-chain or branched alkyl substituents which each contain 1 to 4 carbon atoms.
There may be mentioned by way of example and preferably: N,N—dimethylamino, MN—diethylamino,
N—ethyl-N—methylamino, N—methyl-N—n-propylamino, N—isopropyl-N—methylamino, N—isopropyl-N—n-
20 propylamino, sopropylamino, N—n-butyl—N—methylamino, and N-tert—butyl-N—methylamino.
1C1—C4l—Alfllcarbonyl in the context of the invention represents a straight-chain or branched alkyl
radical having 1 to 4 carbon atoms which is bonded to the rest of the molecule Via a carbonyl group
[—C(=O)-]. There may be mentioned by way of example and preferably: acetyl, propionyl, ryl,
iso—butyryl, n-pentanoyl, and pivaloyl.
25 C1-C4 -Alkox carbon 1 in the context of the invention represents a straight-chain or branched
alkoxy radical having 1 to 4 carbon atoms which is bonded to the rest of the molecule via a carbonyl
group [-C(=O)-]. There may be mentioned by way of e and preferably: methoxycarbonyl,
ethoxycarbonyl, n-propoxycarbonyl, isopropoxycarbonyl, n-butoxycarbonyl, and tert-butoxycarbo-
nyl.
D
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_12_
Mono- C1-C4 -alk laminocarbon 1 in the context of the invention represents an amino group which
is bonded to the rest of the molecule Via a carbonyl group [-C(=O)-] and which has a straight-chain
or branched alkyl substituent having 1 to 4 carbon atoms. There may be mentioned by way of
example and preferably: methylaminocarbonyl, ethylaminocarbonyl, n-propylaminocarbonyl, iso-
propylaminocarbonyl, n-butylaminocarbonyl, and tert—butylaminocarbonyl.
Di—(C1-CQ-alkylaminocarbonyl in the context of the ion represents an amino group which is
bonded to the rest of the le via a carbonyl group [-C(=O)-] and which has two identical or
different straight-chain or branched alkyl substituents having in each case 1 to 4 carbon atoms.
There may be mentioned by way of example and preferably: N,N—dimethylaminocarbonyl,
10 MN—diethylaminocarbonyl, N—ethyl-N—methylaminocarbonyl, N—methyl-N—n-propylaminocarbonyl,
N—isopropyl-N—methylaminocarbonyl, isopropylaminocarbonyl, N—n-butyl-N—methylamino-
carbonyl, and N-tert—butyl-N—methylaminocarbonyl.
C3-C6 -C cloalk l in the context of the invention represents a monocyclic, saturated carbocycle
having 3 to 6 ring carbon atoms. There may be mentioned by way of example: cyclopropyl, cyclo-
15 butyl, cyclopentyl, and cyclohexyl. Preferred are cyclopropyl and utyl.
4- to ered heterocycloalkyl and 4- to 6-membered heterocycloalkyl in the context of the
invention represent a clic, saturated heterocycle with 4 to 7 or, respectively, 4 to 6 ring atoms
in total, which contains one or two identical or different ring heteroatoms from the series N, O, S and
S(O)2, and which can be bonded via a ring carbon atom or via a ring nitrogen atom (if present). 4- to
20 6-membered heterocycloalkyl containing one ring nitrogen atom and optionally one filrther ring
heteroatom from the series N, O or S(O)2 is preferred. 5- or 6-membered heterocycloalkyl containing
one ring nitrogen atom and optionally one further ring heteroatom from the series N or O is
particularly preferred. There may be mentioned by way of e: azetidinyl, oxetanyl, thietanyl,
pyrrolidinyl, pyrazolidinyl, imidazolidinyl, tetrahydrofuranyl, thiolanyl, oxidothiolanyl,
25 azolidinyl, 1,3-oxazolidinyl, 1,3—thiazolidinyl, piperidinyl, piperazinyl, tetrahydropyranyl,
tetrahydrothiopyranyl, 1,3-dioxanyl, 1,4—dioxanyl, azinanyl, morpholinyl, thiomorpholinyl,
1,1-dioxidothiomorpholinyl, azepanyl, l,4-diazepanyl, and l,4-oxazepanyl. red are inyl,
pyrrolidinyl, pyrazolidinyl, imidazolidinyl, 1,2-oxazolidinyl, 1,3-oxazolidinyl, piperidinyl,
piperazinyl, 1,2-oxazinanyl, morpholinyl, and thiomorpholinyl. Particularly preferred are pyrroli-
30 dinyl, piperidinyl, piperazinyl, and morpholinyl.
5—membered aza-heteroa l in the context of the ion represents an aromatic cyclic radical
Daroaromatic) having 5 ring atoms in total, which contains at least one ring nitrogen atom and
optionally one or two further ring heteroatoms from the series N, O and/or S, and which is bonded
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_13_
via a ring carbon atom or ally via a ring nitrogen atom (when allowed by valency).
5—membered aza-heteroaryl containing one ring nitrogen atom and one or two fithher ring hetero-
atoms from the series N and/or 0 is preferred. There may be mentioned by way of example: pyrrolyl,
pyrazolyl, imidazolyl, yl, thiazolyl, isoxazolyl, isothiazolyl, triazolyl, oxadiazolyl, and
thiadiazolyl. Preferred are pyrazolyl, imidazolyl, oxazolyl, isoxazolyl, and oxadiazolyl.
An oxo substituent in the context of the invention represents an oxygen atom, which is bonded to a
carbon atom Via a double bond.
In the context of the present invention, for all the radicals which occur several times, the meaning
thereof is independent of each other. If radicals in the compounds according to the invention are
10 substituted, the radicals can be mono- or polysubstituted, unless specified ise. tution by
one or by two or three identical or different substituents is preferred. Substitution by one or by two
identical or different substituents is particularly preferred.
In a preferred embodiment, the t invention relates to compounds of general formula (I),
wherein
15 R1 is chloro, methyl or methoxy,
R2 is hydrogen or methoxy,
G1 represents chloro, (C1-C4)-alkyl, (C1-C4)-alkoxycarbonyl or 5-membered aza—heteroaryl
selected from the group consisting of pyrazolyl, olyl, oxazolyl, isoxazolyl and oxa-
diazolyl, or represents the group -CH2-OR3 or -CH2-NR4R5, wherein
20 R3 is hydrogen, (C1-C4)-a1kyl or (C3—C6)-cycloalkyl,
wherein said (C1-C4)-alkyl is optionally substituted with y, )-alkoxy,
hydroxycarbonyl, (C1—C4)—all<oxycarbonyl, amino, aminocarbonyl, (C3—C6)—cyclo-
alkyl or up to three fluoro atoms,
R4 is hydrogen or (C1-C4)-alkyl,
25 R5 is hydrogen, (C1-C4)-a1kyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 5- or 6-
membered heterocycloalkyl, wherein
(i) said (C1-C4)-alkyl is ally substituted with hydroxy, hydroxycarbonyl or
D (C3-C6)-cycloalkyl,
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_14_
and
(ii) said 5- or ered heterocycloalkyl is ally substituted with 0x0,
01‘
R4 and R5 are joined and, taken together with the nitrogen atom to which they are attached,
5 form a monocyclic, saturated 4— to 6-membered cycloalkyl ring which may
contain a second ring heteroatom selected from N(R7) and O, and which may be
substituted on a ring carbon atom with oxo or hydroxy, and wherein
R7 is hydrogen or (C1—C4)—a]kyl,
and
10 G2 represents chloro, cyano, (C1-C4)-alkyl, or the group -CR8AR8B-OH, -CH2-NR9R10,
-C(=O)-NR11R12 or -CH2-OR15, wherein
RSA and R813 are independently selected from the group consisting of hydrogen, )—alkyl
and cyclopropyl,
is hydrogen or methyl,
15 R10 is hydrogen, (C1-C4)-alkyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 5— or 6-
membered heterocycloalkyl, wherein
(i) said (C1-C4)-alkyl is ally substituted with hydroxy or aminocarbonyl,
and
(ii) said 5- or 6-membered heterocycloalkyl is optionally substituted with 0x0,
20 is hydrogen or methyl,
R12 is hydrogen, (C1-C4)-alkyl, (C3-C6)-cycloalkyl or 5- or 6-membered heterocyclo-
alkyl, wherein
(i) said (C1-C4)-alkyl is optionally substituted with hydroxy,
and
25 (ii) said 5- or 6-membered heterocycloalkyl is optionally substituted with 0x0,
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_15_
01‘
R9 and R10, or R11 and R12, respectively, are joined and, taken together with the nitrogen
atom to which they are attached, form a monocyclic, saturated 4- to 6—membered
heterocycloalkyl ring which may contain a second ring heteroatom selected from
N(R13), O, S and S(O)2, and which may be substituted on ring carbon atoms with up
to three substituents independently selected from the group consisting of fluoro, (C1-
C4)-alkyl, 0X0, hydroxy, amino and aminocarbonyl, and wherein
R13 is en, (C1-C4)-alkyl, cyclopropyl, cyclobutyl, formyl or (C1-C4)-alkyl-
carbonyl,
10 and
R15 is methyl or ethyl,
with the proviso that G1 is not chloro when G2 is chloro 0r cyano.
In a particularly preferred embodiment, the present invention relates to nds of general for—
mula (I), wherein
15 R1 is methyl,
R2 is methoxy,
G1 represents methyl, oxazol-S-yl or the group R3 or -CH2-NR4R5, wherein
R3 is hydrogen, (C1-C4)-alky1, cyclopropyl or cyclobutyl,
wherein said (C1-C4)-alkyl is optionally substituted with y, methoxy, ethoxy,
20 hydroxycarbonyl, methoxycarbonyl, ethoxycarbonyl, amino, aminocarbonyl,
cyclopropyl, cyclobutyl or up to three fluoro atoms,
is hydrogen, methyl or ethyl,
is hydrogen, (C1-C4)-alkyl, acetyl, cyclopropyl, cyclobutyl or 2-oxopyrrolidinyl,
wherein said )-alkyl is optionally substituted with hydroxy, hydroxycarbonyl,
25 ropyl or cyclobutyl,
or
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—16—
R4 and R5 are joined and, taken together with the nitrogen atom to which they are attached,
form a clic, saturated 5- or 6-membered heterocycloalkyl ring which may
contain a second ring heteroatom selected from NH and O, and which may be sub-
stituted on a ring carbon atom with oxo or hydroxy,
5 and
G2 represents methyl or the group gB—OH, -CH2-NR9R10 or -C(=O)-NR“R12, n
R8A and R813 are independently hydrogen or methyl,
R9 is en,
R10 is hydrogen, (C1-C4)-alkyl, acetyl, cyclopropyl, cyclobutyl or 2-oxopyrrolidinyl,
10 wherein said (C1-C4)-alkyl is ally substituted with hydroxy or aminocarbonyl,
R11 is hydrogen or methyl,
R12 is hydrogen, (C1-C4)-alkyl, cyclopropyl, cyclobutyl or 2-oxopyrrolidin-3—yl,
wherein said (C1-C4)—a]l<yl is optionally substituted with hydroxy,
or
15 R9 and R10, or R11 and R12, respectively, are joined and, taken together with the nitrogen
atom to which they are attached, form a monocyclic, saturated 4- to 6—membered
heterocycloalkyl ring which may n a second ring heteroatom selected from
N(R13), O and S(O)2, and which may be substituted on ring carbon atoms with up to
three substituents independently selected from the group consisting of fluoro, methyl,
20 0X0, hydroxy, amino and aminocarbonyl, and wherein
R13 is hydrogen, formyl or acetyl.
In a distinct embodiment, the present invention relates to compounds of general formula (I), n
R1 is methyl,
and
25 D is methoxy.
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_17_
In a further distinct embodiment, the present invention relates to compounds of general formula (I),
wherein
G1 represents the group -CH2-OR3, n
R3 is hydrogen or (C1-C4)-a1kyl optionally substituted with hydroxy, methoxy, amino,
aminocarbonyl or up to three fluoro atoms.
In another distinct embodiment, the present invention relates to nds of general formula (I),
wherein
Gl represents the group -CH2-NR4R5, wherein
R4 is hydrogen or methyl,
10 R5 is (C1-C4)-alkyl, acetyl, ropyl, cyclobutyl or 2-oxopyrrolidinyl,
wherein said (C1-C4)-a1kyl is optionally substituted with hydroxy,
or
R4 and R5 are joined and, taken together with the nitrogen atom to which they are attached,
form a monocyclic, saturated 5- or 6-membered heterocycloalkyl ring which may
15 contain a second ring heteroatom selected from NH and O, and which may be sub-
stituted on a ring carbon atom with oxo or hydroxy.
In r distinct embodiment, the present invention relates to nds of general formula (I),
n
G2 represents the group -CH2—NR9R1°, wherein
20 R9 is hydrogen,
R10 is acetyl or yrrolidin—3—yl,
or
R9 and R10 are joined and, taken together with the nitrogen atom to which they are attached,
form a monocyclic, saturated 5— or 6-membered heterocycloalkyl ring which may
25 D contain a second ring heteroatom selected from N(R13) and O, and which may be
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—18—
substituted on ring carbon atoms with up to two substituents independently selected
from the group consisting of methyl, OX0, hydroxy and amino, and wherein
R13 is hydrogen, formyl or acetyl.
In yet another distinct embodiment, the present invention relates to compounds of general formula
5 (I), wherein
G2 represents the group -C(=O)-NR“R12, n
R11 is hydrogen,
R12 is (C1-C4)-alkyl or 2-oxopyrrolidinyl,
wherein said (C1-C4)-alkyl is optionally substituted with hydroxy,
10 or
R11 and R12 are joined and, taken together with the nitrogen atom to which they are attached,
form a monocyclic, ted 4— to 6—membered heterocycloalkyl ring which may
contain a second ring heteroatom selected from NH and O, and which may be
substituted on a ring carbon atom with 0x0 or hydroxy.
15 In an especially preferred embodiment, the present invention relates to compounds of l formula
(I), wherein
R1 is methyl,
R2 is methoxy,
G1 represents the group -CH2-OR3, wherein
20 R3 is )-alkyl optionally substituted with hydroxy, amino or aminocarbonyl,
represents the group -CH2-NR9R10 or —C(=O)-NR”R12, wherein
R9 is hydrogen,
R10 is 2-oxopyrrolidinyl,
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_19_
01‘
R9 and R10 are joined and, taken together with the nitrogen atom to which they are attached,
form a piperazin— l -yl, 3 perazin— l -yl or 4-acetylpiperazin— l -yl ring,
R11 is hydrogen,
5 R12 is 2-oxopyrrolidin—3-yl,
or
R11 and R12 are joined and, taken together with the nitrogen atom to which they are ed,
form a 3 -hydroxyazetidin— l —yl, 4-hydroxypiperidin— l -yl or 3 -oxopiperazin— 1 —yl ring.
The definitions of residues indicated specifically in the respective combinations or preferred com-
10 binations of residues are also replaced as d by definitions of es of other combinations,
irrespective of the particular combinations indicated for the residues. Combinations of two or more
of the abovementioned preferred ranges are particularly preferred.
The compounds of the general formula (I) can be prepared by various synthetic routes which are
primarily governed by the nature of the particular G1 and G2 groups chosen (see definitions above).
15 Thus, in another embodiment, the present invention s to a process for preparing the compounds
ofthe general formula (1), characterized in that
[A] a 6-substituted 4-aminopyrrolo[2,l-f][1,2,4]triazine of formula (II)
N H
2
3
O R
N / /
K ,N /
N (11),
wherein R3 has the meaning described above,
20 is at first reacted with formaldehyde and an amine of formula (III)
9
HN/R
\Rm (111),
D
wherein R9 and R10 have the gs described above,
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_20_
in the presence of an acid to give a compound of formula (IV)
wherein R3, R9 and R10 have the meanings described above,
then brominated to a compound of formula (V)
wherein R3, R9 and R10 have the meanings described above,
and subsequently coupled with a benzothiophen—Z-yl boronate of formula (VI)
1 14
R O—R
\ /
B\
S O_R14
R2 (v1),
wherein R1 and R2 have the gs described above,
10 and
R14 represents en or (C1-C4)-alkyl, or both R14 residues are linked together to form a
-(CH2)2-, -C(CH3)2-C(CH3)2-, 3-, -CH2-C(CH3)2-CH2- OI‘ -C(=O)-CH2-N(CH3)-
CH2-C(=O)- bridge,
Din the presence of a ium catalyst and a base to yield the target compound of formula (I-A)
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(I-A),
wherein R1, R2, R3, R9 and R10 have the meanings described above,
or
[B] a 6-substituted 4-aminopyrrolo[2,l-f][1,2,4]triazine of a (II)
N H
2
o—R3
N / /
K /N /
N
5 (11),
wherein R3 has the meaning described above,
is at first formylated with MN—dimethylformamide in the ce of phosphoryl chloride to an
aldehyde of a (VII)
(VII),
10 wherein R3 has the meaning described above,
then brominated to a compound of formula (VIII)
D
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(VIII),
wherein R3 has the meaning described above,
and subsequently coupled with a benzothiophen-Z-yl boronate of formula (VI)
1 14
R O—R
\ /
B\
S O_R14
R2 (VI),
wherein R1, R2 and R14 have the meanings described above,
in the presence of a palladium catalyst and a base to give a compound of formula (IX)
(1X),
wherein R1, R2 and R3 have the meanings described above,
which then is either
10 [B-l] reacted with an amine of formula (III)
9
/R
HN
\R10 (111),
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_23_
wherein R9 and R10 have the meanings described above,
in the presence of an acid and a reducing agent to yield the target compound of formula
(I-A)
(I-A),
wherein R1, R2, R3, R9 and R10 have the meanings described above,
or
[B-2] oxidized to a carboxylic acid of formula (X)
(X):
wherein R1, R2 and R3 have the meanings bed above,
10 and finally coupled with an amine of formula (XI)
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_24_
11
HN<
R12 (X1),
wherein R11 and R12 have the meanings described above,
in the presence of a condensing agent to yield the target compound of formula (I—B)
(1-3),
wherein R1, R2, R3, R11 and R12 have the meanings described above,
[C] a 6-substituted 4-aminobromopyrrolo[2,l-f][l ,2,4]triazine of formula (XII)
NH2 Br
OH
N / /
R /N /
N (XII)
is at first d with a benzothiophen—2—yl te of formula (VI)
R1 O_R14
\ /
B\
S O_R14
R2 (v1),
in R1, R2 and R14 have the meanings described above,
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_25_
in the presence of a palladium catalyst and a base to give a nd of a (XIII)
(XIII),
wherein R1 and R2 have the meanings described above,
and then reacted with formaldehyde and an amine of formula (III)
9
R
HN<
10
R
5 (111),
wherein R9 and R10 have the meanings described above,
in the presence of an acid to yield the compound of formula (I-C)
(1—C)7
wherein R1, R2, R9 and R10 have the meanings described above,
10 which subsequently is either
D
[C-l] ed to an aldehyde of formula (XIV)
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(XIV),
wherein R1, R2, R9 and R10 have the meanings described above,
and treated with an amine of formula (XV)
4
R
HN<
R5 (XV),
wherein R4 and R5 have the meanings described above,
in the presence of an acid and a reducing agent to yield the target compound of formula
(1-D)
(1-D),
wherein R1, R2, R4, R5, R9 and R10 have the meanings described above,
D
10 01‘
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_27_
[C-2] converted into the corresponding 6-(halomethyl) tive of formula (XVI)
(XV1),
wherein R1, R2, R9 and R10 have the meanings described above,
and
X is chloro, bromo or iodo,
and treated With an l of formula (XVII)
R3A—OH (XVII),
wherein R3A has the meaning of R3 as described above except for hydrogen,
in the presence of a base to yield the target compound of formula (I-E)
(LE):
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—28—
wherein R1, R2, R”, R9 and R10 have the meanings described above,
optionally followed, where appropriate, by (i) separating the compounds of formula (I) thus obtained
into their respective enantiomers and/or diastereomers, preferably using chromatographic methods,
and/or (ii) ting the nds of formula (I) into their respective hydrates, es, salts
and/or hydrates or solvates of the salts by treatment with the corresponding solvents and/or acids or
bases.
The compounds of the ae (I-A), (I—B), (I—C), (1—D) and (LE), which can be prepared by the
processes described above, each represent a particular subset of the compounds of the general for-
mula (I).
10 Process steps [A] (II) —> (IV) and [C] (XIII) —> (I-C), representing Mannich—type aminomethylation
reactions, are carried out in the usual way by treating the respective starting compound with a
mixture of aqueous formaldehyde and amine component (III) in the presence of an acid catalyst such
as formic acid or acetic acid. Preferably, acetic acid is used both as catalyst and solvent. The
reaction is usually performed at a temperature ranging from +20°C to +80°C.
15 As the brominating agent for process steps [A] (IV) —> (V) and [B] (VII) —> (VIII), preferably
N—bromosuccinirnide (NBS), 1,3-dibromo—5,5—dimethylhydantoin (DBDMH) or elemental bromine
are used. The ons are generally carried out in an inert solvent, such as dichloromethane, chloro-
form, ydrofuran, acetonitrile or ethylformamide (DMF), within a temperature range
from -78°C to +20°C.
20 The coupling reactions [A] (V) + (VI) —> (LA), [B] (VIII) + (VI) —> (IX) and [C] (XII) + (VI) —>
(XIII) [”Suzuki-Miyaura coupling"] are generally carried out in an inert solvent with the aid of a
palladium catalyst and an aqueous base. Palladium catalysts suitable for this purpose include, for
example, palladium(II) acetate, palladium(II) chloride, iphenylphosphine)palladium(II)
chloride, bis(acetonitrile)palladium(II) de, [1,l'-bis(diphenylphosphino)ferrocene]palladium(II)
25 chloride, tetrakis(triphenylphosphine)palladium(0), benzylideneacetone)palladium(0), and His-
(dibenzylideneacetone)dipalladium(0), optionally in ation with other phosphine ligands such
as, for example, 2-dicyclohexylphosphino-2',4‘,6'-triisopropylbiphenyl (X-Phos), 2-dicyclohexyl-
phosphino-Z',6'-dimethoxybiphenyl (S-Phos), 4,5-bis(diphenylphosphino)-9,9-dimethylxanthene
(Xantphos), or 4-(di-tert—butylphosphino)—N,N—dimethylaniline. Also, palladium pre-catalysts from
30 which the catalytically active species is generated under the reaction ions, such as (2'—aminobi—
Dyl-Z-y1)(chloro)palladium-dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine, can be used
[see, for example, S. Kotha et al., Tetrahedron 58, 9633-9695 (2002); T. E. Barder er £11., J. Am.
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Chem. Soc. 127 (13), 4685-4696 ; S. L. ld et al., J. Am. Chem. Soc. 132 (40),
14073-14075 (2010), and further nces cited therein].
Suitable bases for these coupling ons are in particular alkali carbonates, such as sodium,
potassium or caesium carbonate, alkali phosphates, such as sodium or potassium phosphate, or
alkali fluorides, such as potassium or caesium fluoride. Usually, these bases are ed as
aqueous solutions. The reactions are carried out in organic solvents that are inert under the reaction
conditions. Preferably, water-miscible organic solvents, such as 1,2-dimethoxyethane, tetrahydro-
furan, oxane, acetonitrile, MN-dimethylformamide (DMF) or dimethylsulfoxide (DMSO), are
employed but other inert solvents, such as dichloromethane or toluene, may also be used.
10 Process step [B] (11) —> (V11) ["Vilsmeier—Haack formylation"] is d out in the usual manner by
ng the pyrrolotriazine (11) in N,N—dimethylformamide (DMF) solvent With phosphoryl chloride.
The reaction is usually performed at a temperature from 0°C to +80°C.
Reducing agents suitable for the reductive amination reactions [B-l] (1X) + (111) —> (I-A) and [C-1]
(XIV) + (XV) —> (I-D) are customary alkali borohydrides, such as lithium borohydride, sodium
15 borohydride, potassium borohydride, sodium cyanoborohydride or sodium triacetoxyborohydride.
The transformations are generally carried out in the presence of an acid, preferably acetic acid, in an
alcohol or ether solvent, such as methanol, ethanol, isopropanol, tetrahydrofuran or 1,4—di0xane,
within a ature range from 0°C to +80°C, depending on the reactivity of the amine components
(111) and (XV), respectively, and/or the particular borohydride used.
20 For the oxidation reaction in process step [B—2] (1X) —> (X), oxidation With sodium chlorite in the
presence of a hypochlorite scavenger such as 2—methylbutene represents the method of choice [cf.
H. W. Pinnick et al., edron 37, 2091—2096 (1981); A. Raach and O. Reiser, J. Pmkt. Chem.
342 (6), 605-608 (2000), and references cited therein]. The reaction is usually carried out in a
tetrahydrofuran/water mixture at a temperature between 0°C and ambient temperature.
25 Condensing agents suitable for s step [B-2] (X) + (X1) —> (I-B) [amide formation] e, for
example, carbodiirnides such as N,N’-diethyl-, N,N’-dipropyl-, N,N’-diisopropyl-, N,N'—dicyclo-
hexylcarbodiimide (DCC) or N—(3-dimethylaminopropyl)-N’-ethylcarbodiimide (EDC), phosgene
derivatives such as MN’-carbonyldiimidazole (CD1) or isobutyl chloroformate, oc-chloroenamines
such as 1-chloromethyldimethy1amino—1—propene, phosphorus compounds such as propane-
30 phosphonic anhydride, l cyanophosphonate, bis(2-oxooxazolidinyl)phosphoryl chloride,
Dotriazol-l-yloxy-tris(dimethylamino)phosphonium hexafluorophosphate (BOP) or benzotriazol-
1—yloxy-tris(pyrrolidino)phosphonium hexafluorophosphate (PyBOP), and m compounds such
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as 0-(benzotriazol-l-yl)-N,N,N’,N’-tetramethyluronium tetrafluoroborate (TBTU), 0-(benzotriazol-
1—yl)-N,N,N’,N’-tetramethyluronium hexafluorophosphate (HBTU), 2-(2-oxo—l—(2H)—pyridyl)-
1,1,3,3-tetramethyluronium tetrafluoroborate (TPTU), 0-(7-azabenzotriazol-l-yl)-N,N,N',N'—tetra-
uronium hexafluorophosphate (HATU) or 0-(1I-I—6-chlorobenzotriazol-l-yl)-l,l,3,3-tetramethyluronium
tetrafluoroborate (TCTU), if appropriate in ation With further auxiliaries,
such as l-hydroxybenzotriazole (HOBt) or oxysuccinimide (HOSu), and/or bases such as
alkali carbonates, for example sodium or potassium carbonate, or organic amine bases, such as tri-
ethylamine, N—methylpiperidine, N—methylmorpholine (NMM), MN—diisopropylethylamine (DIPEA),
pyridine or 4-]\/',N-dimethylaminopyridine (DMAP). Preference is given to using 0-(7-azabenzotria-
10 zol—l-yl)-N,N,N’,N’-tetramethyluronium hexafluorophosphate (HATU) or 0—(benzotriazol—1-yl)-
N,N,N’,N’-tetramethyluronium tetrafluoroborate (TBTU) in combination With NN—diisopropylethyl-
amine (DIPEA) and optionally l-hydroxybenzotriazole (HOBt).
Inert solvents for process step [B-2] (X) + (XI) —> (I-B) are, for example, ethers such as diethyl
ether, tert—butyl methyl ether, tetrahydrofuran, l,4-dioxane or 1,2-dimethoxyethane, hydrocarbons
15 such as e, e, xylene, hexane or cyclohexane, halogenated hydrocarbons such as
dichloromethane, trichloromethane, carbon tetrachloride, 1,2-dichloroethane, trichloroethylene or
chlorobenzene, or other solvents such as acetone, itrile, ethyl acetate, ne, dimethyl-
sulfoxide (DMSO), MN—dimethylformamide (DMF), N,N’-dimethylpropylene urea (DMPU) or
N—methylpyrrolidinone (NMP). It is also possible to use mixtures of these solvents. Preference is
20 given to using romethane, tetrahydrofuran, N,N—dimethylformamide or mixtures thereof. The
reactions are generally carried out at a temperature ranging from 0°C to +60°C, preferably at +10°C
to +40°C.
Oxidizing agents that are capable of converting the primary alcohol (l-C) into the de (XIV)
(process [C-l]) under mild conditions e 1,1,1—triacetoxy—1,1-dihydro-l,2-benziodoxol—3(1H)—
25 one ("Dess-Martin periodinane"), 2,2,6,6-tetramethylpiperidin-l-oxyl (TEMPO) in combination with
secondary oxidants such as iodosobenzene—I,I—diacetate or sodium hypochlorite, and yl-
sulfoxide (DMSO)-based ion systems such as DMSO/trifluoroacetic anhydride or
DMSO/N,N’-dicyclohexylcarbodiimide (DCC). Preference is given to l,1,l-triacetoxy—1,1-dihydro-
l,2-benziodoxol-3(lH)-one. The reaction is generally carried out in an inert solvent, preferably using
30 dichloromethane,
For the hydroxy—to-halogen ormation in s step [C-2] (l-C) —> (XVI), various standard
gods and reagents that are well known in the art may be employed. Reagents of choice are thionylc oride [for X = C1], tetrabromomethane/triphenylphosphine [for X = Br], and iodine/triphenyl-
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phosphine [for X = I]. The preparation of 6-(chloromethyl) derivatives (XVI) [X = Cl] is preferred
for reasons of convenience of work-up and nd stability.
Bases suitable for the process step [C-2] (XVI) + (XVII) —> (I-E) [ether formation] are in particular
alkali carbonates such as lithium, sodium, potassium or caesium ate, alkali acetates such as
sodium or potassium e, or customary tertiary amine bases such as triethylamine,
N—methylmorpholine, N—methylpiperidine, MN—diisopropylethylamine or ne. Preference is
given to MN—diisopropylethylamine (DIPEA). The reaction (XVI) + (XVII) —> (I-E) is performed in
an inert solvent, such as ydrofuran, or without solvent, using an excess of alcohol (XVII), at a
temperature g from +20°C to +200°C, preferably at +50°C to . Advantageously, the
IO conversion is carried out by means of a microwave reactor device.
The reaction ce (I-C) —> (XVI) —> (I—E) may be d out in two separate steps, i.e. with
isolation and purification of the intermediate compound (XVI), or it may be performed using a one-
pot procedure, i.e. employing the crude intermediate (XVI) as ed in the preparation reaction.
In cases Where a primary or ary amine moiety forms part of the G1 or G2 group in the target
15 compounds of formula (I), it may sometimes be appropriate in the preparation reactions described
above to use a protected derivative of this amine as on component instead of the free amine.
For this purpose, conventional temporary amino—protecting groups, such as acyl groups (e.g., acetyl
or trifluoroacetyl) or carbamate-type protecting groups (e. g., a Boc-, Cbz- or Fmoc-group), may be
employed. A Boc (tert—butoxycarbonyl) group is preferably used. Similarly, a hydroxy function
20 being part of the G1 or G2 group may arily be blocked in sor nds and process
intermediates, for example as a tetrahydropyranyl (THP) ether or as a silyl ether derivative, such as
a trimethylsilyl or tert—butyldimethylsilyl ether.
These protecting groups may then be cleaved off concomitantly during aqueous work-up and puri-
fication procedures, or they are removed in a subsequent, separate reaction step using standard
25 methods well known in the art. The preparation of such protected intermediates from the corres-
ponding free amines or alcohols is likewise readily accomplished following general procedures
described in the literature [see, for example, T. W. Greene and P. Wuts, Protective Groups in
Organic Synthesis, Wiley, New York, 1999].
Certain types of protected (i.e. acylated) amine derivatives exert significant FGFR-inhibiting activity
30 by their own. Accordingly, such compounds are also encompassed by the general formula (I) as de—
Di above.
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The preparation of the compounds of the invention may be illustrated by means of the following
on schemes:
Scheme 1
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Scheme 2
R1 OR
\ /
B
\
14
3 9
OR /R
2 HN\ 10
R R
\ N /
Pd-catalyst/base NaBHSCN
Or
NaBH(OAc)3
AcOH
NaClO2
MeZC=CHMe
NaH2P04
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Scheme 3
OH
Dess-Martin
periodinane
NaBH(OAc)3
ACOH
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Scheme 4
RBA—OH RSA—OH
base base
6—substituted 4-arrfinopyrrolo[2,l-f][l,2,4]triazines of formula (II) can, for example, be pre—
pared by two different routes which are depicted in Scheme 5 below. In the first route, 4—amino
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cyanopyrrolo[2,1-f][l,2,4]triazine (XVIII) is converted into the ester (XIX) by acid-mediated alco-
s and then reduced to the roxymethyl) compound (IIa) [R3 in (II) = H] using lithium tri-
ethylborohydride. rd transformation into the ponding 6-(halomethyl)pyrrolotriazine,
such as the chloro compound (XX), followed by treatment with an alcohol of a (XVII) in the
presence of a base readily provides the ether tives of formula (IIb) [R3 in (II) 72 H]. The
preparation of the ng compound (XVIII) has been described previously [see Int. Pat. Appl. WC
2007/ 064883 (Intermediate AX/ Step 3)].
The second route starts from the protected 1-aminobromocyanopyrrole (XXI) [preparation
given in Int. Pat. Appl. WO 2007/064883 (Intermediate AAE, Step 3)]. Deprotonation of the ure-
10 thane nitrogen, subsequent metalation in 4—position and reaction With dehyde affords the
4-(hydroxymethyl) derivative (XXII). Treatment with hydrogen chloride followed by addition of
alcohol (XVII) and condensation with formamidine using a one-pot procedure then provides the
target compound of formula (IIb). This route is especially suited for the preparation of alkyl ether
derivatives [R3A in (IIb) = (C1-C4)-alkyl] in that the alcohol reactant (XVII) may also serve as the
15 reaction t in these cases.
Scheme5
NH2 NH2 NH2
O
N/ / EtOH N/ / LiBHEt3 N/ /
|\\N/N / CN —> k / —> k /
conc.HZSO4 \N/N OEt \N/N OH
(XVIII) (XIX) (IIa)
NH2 NH2
SOCI2 N/ / R3A—OH (XVII) N/ /
N /
\N/ N /
CI base K\N/ O—R3A
XHCI
(XX) (IIb)
1. HCI
2. RsA—OH (XVII)
3. HC(=NH)NH2
NC NC
1. MeMgBr v
Br
Boc\N/N67
/ /
2. n-BuLi Boc\N/N OH
H 3. H2C=O H
D (XXI) (XXII)
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The 4-aminobromopyrrolo[2,1-f][1,2,4]triazine derivative of formula (XII) is readily available
from 4-amino(hydroxymethyl)pyrrolo[2,1—f][1,2,4]triazine (Ila) (cf. Scheme 5) by initial 5,7-
dibromination using 1,3-dibromo-5,5-dimethylhydantoin and subsequent selective 7-debromination
via a halogen-metal exchange with n-butyllithium followed by methanol quenching (see Scheme 6
below).
Scheme 6
2 Br
N/ / o N/ / 1. n-BuLi,-78°C
K /N / / —>
OH \N/N OH 2. MeOH
Br
(Ha) (XXIII)
N/ /
K/N/
N OH
(XII)
The benzothiophen—Z-yl boronates of formula (VI) can conveniently be prepared starting from the
substituted thiophenol derivatives of formula (XXIV) (see Scheme 7 below). Alkylation with bromo-
10 acetal (XXV) and uent polyphosphoric acid-mediated cyclization provides the benzothiophene
intermediates of formula ) which are then metalated in 2-position and reacted with a yl
borate. Alkaline work-up s the free (benzothiophen—Z-yl)boronic acids of formula (VIa) which
may be ormed, if desired, into cyclic boronates, e. g. so-called MIDA boronates of formula
(VIb), by standard procedures known in the art [see, for e, D. M. Knapp er al., J. Am. Chem.
15 Soc. 131 (20), 6961-6963 (2009)].
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Scheme 7
R1 Br/YOEt R1 EtO OEt
(XXV)
OEt PPA
—> —>
SH S
C32C03
R2 R2
(XXIV) (XXVI)
R1 R1 OH
\ 1. n-BuLi, B(OiPr)3 \
—> B:
S 8 OH
2. aq. NaOH
R2 R2
(XXVII) (VIa)
0
/—COOH
HaC—N
LCOOH \
water trap S 8::N—CH
(VIb)
[cf. P. A. Plé and L. J. Mamett, J. Heterocyclic Chem. 25 (4), 1271-1272 ; A. Venturelli et
al, J. Med. Chem. 50 (23), 5644-5654 (2007)].
The compounds of the formulae (III), (XI), (XV), , (XXIV) and (XXV) are either commer-
cially available, known from the literature, or can be prepared from readily available starting
materials by adaptation of standard methods described in the literature. Detailed procedures and
literature references for preparing the starting materials can also be found in the Experimental Part
in the section on the preparation of the starting materials and intermediates.
10 The preparation of finther subgroups of the compounds of general formula (I) is illustrated in the
following reaction schemes 8—14. The required pyrrolotriazine precursors can be readily synthesized
by customary methods well known in the art, and r synthetic ormations, in most
instances, follow the preparation routes that have been outlined in the process section above, using
r types of reactions, such as, for e, bromination, boronate coupling, aminomethylation,
15 reductive amination, oxidation and/or ether or amide forming reactions. Further details are provided
in the Experimental Part on the preparation of the exemplary ments and their respective
Dursor compounds.
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Scheme8
NH2 Br NHZ Br
OH
N/
0TBD'V'S
/ tBuMeZSiCI N/ / 1. n-BuLi
K /N / —> —>
ole K /N /
N N R8A R83
2'
Br Br \n/
O
(XXIII)
Dess-Martin HN/R
perlodlnane. . \ 5
R
—> —>
NaBH(OAc)3
AcOH
[R8A, R813 = (C1-C4)-alkyl, ropyl 0r cyclobutyl].
D
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Scheme 9
[R8A = (C1-C4)-alkyl, cyclopropyl 0r cyclobutyl; X = Cl, Br or 1].
Scheme 10
[R = (C1-C4)-alkyl].
D
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M
NH2
N / /
KN» / R
(XXVIII)
NH2 Br
N / /
KN» / R
/
N\
R10
[R = chloro or (C1-C4)-a1kyl; for the preparation of the starting al (XXVIII), see Int. Pat.
Appl. WO 2007/064883 and WO 2007/056170, respectively].
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Scheme [2
NH2 NH2
OTBD'V'S
N/
OTBDMS
/ MeZZn
k\N/N /
Pd--cata|yst LN/N//
Br CH3
tBuMeZSiCI slilyl etherC eavage
imidazole C|3H3
’3\
NH2
I (I) NH2
/B\
OH / \
N/
OH
/ H3C 0 CH3 N / /
k\N/N /
Pd-catalyst KN/N /
Br
(XXIX) CH3
NBS
1 14
R [OR
\ B
NH
3 \OR14 2 Br
R2 OH
N/ /
<——
Pd-catalystfbase KN/N /
CH3
Dess-Martin
periodinane
R4
/
HN\R5
—>
NaBH(OAc)3
AcOH
[for the preparation of the starting compound (XXIX), see Scheme 14 below].
O
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Scheme 13
H2 NH2 NH2
N/
0TBDMS OTBDMS
/ OHtBuMeZSiCI N/ / NCS N/ /
|\\N/N / _> KN/N / —> /
imidazole \N/N
(Ha)
NH2 Br
OTBDMS
NBS N / /
—>
Dess-Martin
aQ- HCI periodinane
—> —>
/R
HN
\R5
—>
NaBH(OAc)3
AcOH
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Scheme 14
OH 0”
N/
OTBDMS
/ NBS N/ / tBuMeZSiCI N/ /
|\\ —’ _>
N / \ N / -Imldazole- K N /
N/ N/ N/
CH3 0
H30
NH2 Br/NTN\Br NH2 Br
Zn(CN)2 OTBDMS OTBDMS
N / / o N / /
k N / k N /
Pd-catalyst \N/ \N/
ON ON
R OR
\ B’
3 \OR14
R2 OTBDMS
N / /
Pd-catalyst / base K
R4
Dess-Martin HN/
periodlnane- - \ 5
R
—> —>
NaBH(OAc)3
AcOH
The compounds of the present invention have valuable pharmacological properties and can be used
for the tion and treatment of disorders in humans and other mammals.
The compounds of the present invention are potent inhibitors of the ty or expression of receptor
tyrosine kinases, particularly of the FGFR kinases, and most notably of the FGFR-l and FGFR-3
s. ingly, in another embodiment, the present invention provides a method of treating
Drders relating to or mediated by the ty of FGFR kinases in a patient in need of such
treatment, comprising administering to the patient an effective amount of a compound of formula (I)
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as defined above. In certain embodiments, the disorders ng to the activity of FGFR kinases are
proliferative disorders, in particular cancer and tumor diseases.
In the context of the present invention, the term ment” or ”treating" includes inhibiting,
delaying, relieving, mitigating, arresting, reducing, or causing the sion of a disease, disorder,
condition, or state, the development and/or progression thereof, and/or the ms thereof. The
term ntion” or "preventing” includes reducing the risk of having, contracting, or experiencing a
disease, disorder, condition, or state, the development and/or progression thereof, and/or the
symptoms thereof The term prevention includes prophylaxis. Treatment or prevention of a disorder,
disease, condition, or state may be partial or te.
10 The term "proliferative disorder" es disorders involving the undesired or uncontrolled pro-
liferation of a cell. The compounds of the present ion can be utilized to prevent, inhibit, block,
reduce, decrease, control, etc., cell proliferation and/or cell division, and/or produce apoptosis. This
method comprises administering to a subject in need thereof, including a mammal, including a
human, an amount of a compound of this invention, or a pharmaceutically acceptable salt, isomer,
15 polymorph, metabolite, hydrate or solvate thereof which is effective to treat or prevent the disorder.
Throughout this document, for the sake of simplicity, the use of singular language is given
preference over plural language, but is generally meant to include the plural language if not other-
wise stated. For example, the expression "A method of treating a disease in a patient, comprising
administering to a patient an effective amount of a compound of formula (1)” is meant to include the
20 aneous treatment of more than one disease as well as the administration of more than one
compound of formula (I).
Proliferative disorders that can be treated and/or prevented with the compounds of the present
invention ularly include, but are not limited to, the group of cancer and tumor diseases. These
are tood as g, in particular, the following diseases, but t being d to them:
25 mammary carcinomas and mammary tumors l and lobular forms, also in Situ), tumors of the
respiratory tract (small cell and all cell lung carcinoma, parvicellular and non-parvicellular
carcinoma, bronchial oma, bronchial adenoma, pleuropulmonary blastoma), cerebral tumors
(e.g. of the brain stem and of the alamus, astrocytoma, glioblastoma, medulloblastoma,
ependymoma, and neuro-ectodermal and pineal tumors), tumors of the digestive organs (oesophagus,
30 h, gall bladder, small intestine, large intestine, rectum, anus), liver tumors (inter alia
hepatocellular carcinoma, cholangiocellular carcinoma and mixed hepatocellular and cholangio—
Dllar carcinoma), tumors of the head and neck region (larynx, hypopharynx, nasopharynx, oro-
pharynx, lips and oral cavity), skin tumors (squamous epithelial carcinoma, Kaposi sarcoma,
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malignant melanoma, Merkel cell skin cancer and lanomatous skin cancer), tumors of soft
tissue (inter alia soft tissue sarcomas, osteosarcomas, malignant fibrous histiocytomas, lympho-
sarcomas and myosarcomas), tumors of the eyes (inter alia intraocular melanoma, uveal
melanoma and retinoblastoma), tumors of the endocrine and exocrine glands (e.g. d and para-
thyroid glands, pancreas and salivary gland), tumors of the urinary tract (tumors of the bladder,
penis, kidney, renal pelvis and ureter), tumors of the reproductive organs (carcinomas of the endo-
metrium, cervix, ovary, vagina, vulva and uterus in women, and omas of the prostate and
testicles in men), as well as distant metastases thereof. These disorders also include proliferative
blood diseases in solid form and as circulating blood cells, such as lymphomas, leukaemias and
10 myeloproliferative diseases, e.g. acute myeloid, acute lymphoblastic, chronic lymphocytic, chronic
myelogenic and hairy cell leukaemia, and AIDS-related mas, Hodgkin's lymphomas, non-
Hodgkin's lymphomas, cutaneous T-cell mas, Burkitt's lymphomas, and lymphomas in the
central nervous system.
Due to their activity and selectivity profile, the compounds of the present invention are believed to be
15 particularly suitable for the treatment of breast (mammary), lung, stomach (gastric), bladder and
ovary cancer and tumor diseases. rmore, the nds of the present invention may be
especially suited for the prevention or suppression of tumor metastasis in general.
Other proliferative disorders that can be treated and/or prevented With the compounds and methods
of the present invention include sis, keloids and other hyperplasias affecting the skin, bullous
20 disorders associated With dermal blister ion including bullous goid, ma
multiforme and dermatitis herpetiformis, fibrotic disorders such as lung s, atherosclerosis,
restenosis and hepatic cirrhosis, renal diseases including mesangial cell erative disorders,
glomerulopathies, glomerulonephritis, diabetic nephropathy, malignant nephrosclerosis and poly-
cystic kidney disease, benign prostate hyperplasia (BPH), angiogenic or blood vessel proliferative
25 disorders, and thrombotic microangiopathy syndromes.
The nds of the present invention are also useful for the treatment and/or prevention of
ophthalmological diseases such as, for example, age-related macular degeneration (AMD), dry
macular degeneration, ischemic retinal vein occlusion, diabetic macula edema, diabetic retinopathy,
retinopathy of prematurity, and other retinopathies.
30 Other conditions that may be treated and/or prevented by administering a compound of the present
invention include gynaecological diseases such as endometriosis, myoma and ovarian cysts, meta—
D: disorders related to adipogenesis, bile lism, phosphate metabolism, calcium metabolism
and/or bone lization, skeletal disorders such as, for example, dwarfism, achondrodysplasia
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and Pfeiffer syndrome, cartilage diseases such as osteoarthritis and polyarthritis, rheumatoid
arthritis, calvities, and transplant rejection.
The diseases mentioned above have been well characterized in , but also exist with a com-
parable aetiology in other mammals, and can be treated in those with the compounds and methods of
the present invention.
Thus, the present invention r relates to the use of the compounds according to the invention for
the treatment and/or prevention of disorders, especially of the aforementioned disorders.
The present invention further relates to the use of the compounds according to the ion for
preparing a pharmaceutical composition for the treatment and/or tion of disorders, especially
10 ofthe aforementioned disorders.
The present invention further relates to the use of the compounds according to the invention in a
method for the ent and/or prevention of disorders, especially of the aforementioned disorders.
The present invention further relates to a method for the treatment and/or tion of disorders,
especially of the aforementioned disorders, by using an effective amount of at least one of the com—
15 pounds according to the invention.
Compounds of the t invention may be administered as the sole pharmaceutical agent or in
combination with one or more additional therapeutic agents as long as this ation does not lead
to undesirable and/or unacceptable side effects. Such combination therapy includes administration of
a single pharmaceutical dosage ation which contains a compound of formula (I), as defined
20 above, and one or more additional therapeutic , as well as administration of a compound of
formula (I) and each additional therapeutic agent in its own separate pharmaceutical dosage
formulation. For example, a compound of a (I) and a therapeutic agent may be administered
to the patient together in a single (fixed) oral dosage ition such as a tablet or capsule, or each
agent may be administered in separate dosage formulations.
25 Where separate dosage formulations are used, the compound of formula (I) and one or more
additional therapeutic agents may be administered at essentially the same time (i.e., concurrently) or
at separately staggered times (i.e., sequentially).
In particular, the compounds of the present invention may be used in fixed or separate combination
30 Qother anti-cancer agents such as ting agents, anti-metabolites, plant-derived anti—tumor ts, hormonal y agents, topoisomerase inhibitors, tubulin tors, kinase inhibitors,
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targeted drugs, antibodies, antibody-drug conjugates (ADCs), immunologicals, biological response
rs, anti-angiogenic compounds, and other anti-proliferative, cytostatic and/or cytotoxic sub-
stances. In this regard, the following is a non—limiting list of examples of secondary agents that may
be used in combination With the compounds of the t invention:
AbareliX, abiraterone, aclarubicin, afatinib, aflibercept, aldesleukin, alemtuzumab, alitretinoin,
alpharadin, amine, aminoglutethimide, amonafide, amrubicin, amsacrine, anastrozole, andro-
mustine, arglabin, asparaginase, ib, 5—azacitidine, basiliximab, can, bendamustine,
bevacizumab, bexarotene, bicalutamide, rene, cin, bortezomib, bosutinib, ib
alaninate, buserelin, busulfan, cabazitaxel, CAL-101, m folinate, calcium linate,
10 camptothecin, capecitabine, latin, carmofur, carmustine, catumaxomab, cediranib, celmo-
, mab, chlorambucil, chlormadinone, chlormethine, cidofovir, cisplatin, cladribine,
clodronic acid, clofarabine, combretastatin, crisantaspase, crizotinib, cyclophosphamide, cypro-
terone, cytarabine, dacarbazine, dactinomycin, darbepoetin alfa, darinaparsin, dasatinib, dauno-
rubicin, decitabine, degarelix, denileukin diftitox, mab, deslorelin, dibrospidium chloride,
15 docetaxel, dovitinib, doxifluridine, doxorubicin, dutasteride, eculizumab, edrecolomab, eflornithine,
elliptinium acetate, eltrombopag, endostatin, enocitabine, epimbicin, epirubicin, epitiostanol, epoetin
alfa, epoetin beta, epothilone, eptaplatin, eribulin, erlotinib, estradiol, estramustine, etoposide,
everolimus, exatecan, exemestane, exisulind, fadrozole, inide, filgrastim, finasteride,
ridol, fludarabine, 5-fluorouracil, fluoxymesterone, flutamide, foretinib, formestane, fotemu-
20 stine, fulvestrant, ganirelix, gefitinib, gemcitabine, gemtuzumab, can, gimeracil, glufosfamide,
glutoxim, lin, histrelin, hydroxyurea, ibandronic acid, ibritumomab tiuxetan, idarubicin,
ifosfamide, imatinib, imiquimod, improsulfan, intedanib, interferon alpha, interferon alpha-2a,
interferon alpha-2b, interferon beta, interferon gamma, interleukin-2, ipilimumab, irinotecan, ixa-
bepilone, lanreotide, lapatinib, xifene, lenalidomide, lenograstim, an, lenvatinib,
25 lestaurtinib, letrozole, leuprorelin, levamisole, linifanib, linsitinib, lisuride, lobaplatin, lomustine,
lonidamine, lurtotecan, mafosfamide, mumab, masitinib, masoprocol, medroxyprogesterone,
rol, oprol, melphalan, mepitiostane, topurine, methotrexate, methyl
aminolevulinate, methyltestosterone, mifamurtide, mifepristone, miltefosine, miriplatin, mitobronitol,
mitoguazone, mitolactol, mitomycin, mitotane, mitoxantrone, molgramostim, motesanib, nandrolone,
30 nedaplatin, nelarabine, neratinib, nilotinib, nilutamide, zumab, nimustine, nitracrine, nola-
trexed, ofatumumab, oprelvekin, oxaliplatin, paclitaxel, palifermin, pamidronic acid, panitumumab,
pazopanib, pegaspargase, peg-epoetin beta, pegfilgastrim, peg-interferon alpha-2b, pelitrexol,
bnbicin,emetrexed, pemtumomab, pentostatin, peplomycin, perfosfamide, perifosine, pertuzumab, picibanil,pirarubicin, plerixafor, plicamycin, poliglusam, polyestradiol phosphate, ponatinib,
35 porfimer sodium, pralatrexate, prednimustine, procarbazine, procodazole, PX—866, quinagolide,
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fene, raltitrexed, ranibizumab, ranimustine, razoxane, regorafenib, onic acid, rituximab,
romidepsin, romiplostim, rubitecan, saracatinib, sargramostim, satraplatin, selumetinib, sipuleucel-
T, mus, sizofiran, sobuzoxane, sorafenib, streptozocin, sunitinib, talaporfm, tamibarotene,
tamoxifen, inib, tasonermin, teceleukin, tegafur, telatinib, temoporfin, temozolomide,
temsirolimus, teniposide, testolactone, testosterone, tetrofosmin, thalidomide, thiotepa, thymalfasin,
tioguanine, tipifamib, tivozanib, toceranib, tocilizumab, topotecan, toremifene, tositumomab,
trabectedin, trastuzumab, treosulfan, tretinoin, ne, trilostane, trimetrexate, triptorelin,
trofosfamide, ubenimex, icin, vandetanib, vapreotide, varlitinib, nib, vemurafenib,
vidarabine, vinblastine, vincristine, Vindesine, Vinflunine, lbine, volociximab, vorinostat,
10 zinostatin, zoledronic acid, and zorubicin.
Generally, the following aims may be pursued with the combination of compounds of the present
invention with other anti-cancer agents:
0 improved activity in slowing down the growth of a tumor, in reducing its size or even in its com-
plete elimination compared with treatment with a single active compound;
15 0 possibility of ing the herapeutics used in a lower dosage than in monotherapy;
o possibility of a more tolerable y with few side effects compared with individual administra-
tion;
0 possibility of treatment of a r spectrum of cancer and tumor diseases;
0 achievement of a higher rate of response to therapy;
20 0 longer survival time of the patient compared with standard therapy.
Thus, in a further embodiment, the present invention relates to pharmaceutical compositions com-
prising at least one of the compounds according to the invention and one or more additional thera-
peutic agents for the treatment and/or tion of disorders, especially of the aforementioned dis-
orders.
25 In cancer treatment, the compounds of the present invention may also be employed in conjunction
with radiation therapy and/or surgical intervention.
Furthermore, the compounds of a (I) may be utilized, as such or in compositions, in research
adiagnostics, or as analytical reference standards, and the like, which are well known in the art.
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When the compounds of the present invention are administered as pharmaceuticals, to humans and
other mammals, they can be given per se or as a pharmaceutical composition containing, for
example, 0.1% to 99.5% (more ably, 0.5% to 90%) of active ingredient in ation with
one or more pharmaceutically acceptable excipients.
Thus, in another aspect, the present invention relates to pharmaceutical compositions sing at
least one of the compounds according to the invention, conventionally together with one or more
inert, non-toxic, pharmaceutically le excipients, and to the use thereof for the treatment and/or
tion of ers, especially of the aforementioned disorders.
The compounds ing to the invention can act systemically and/or locally. For this purpose, they
10 can be administered in a suitable way such as, for example, by the oral, parenteral, pulmonary,
nasal, lingual, sublingual, buccal, rectal, dermal, ermal, conjunctival, otic or topical route, or
as an implant or stent.
For these application routes, the nds of the invention can be administered in suitable
application forms.
15 Suitable for oral administration are application forms which function according to the prior art and
deliver the compounds according to the invention rapidly and/or in modified fashion, and which
contain the compounds according to the invention in crystalline, ous and/or dissolved form,
such as, for example, tablets (uncoated or coated tablets, for example having enteric coatings or
coatings which are insoluble or dissolve with a delay and control the release of the compound
20 according to the invention), tablets which disintegrate rapidly in the mouth, or films/wafers,
films/lyophilisates, capsules (e.g. hard or soft gelatin capsules), sugar-coated s, granules,
pellets, powders, emulsions, suspensions, aerosols or solutions.
eral application can be d out with avoidance of an absorption step (intravenously,
intraarterially, intracardially, intraspinally or intralumbarly) or with inclusion of an absorption
25 (intramuscularly, subcutaneously, intracutaneously, percutaneously or intraperitoneally). UsefiJl
parenteral application forms include injection and infusion ations in the form of solutions,
suspensions, emulsions, lyophilisates and sterile powders.
Forms suitable for other application routes include, for example, inhalatory pharmaceutical forms
(e.g. powder rs, nebulizers), nasal drops, solutions or sprays, tablets or capsules to be adminis-
30 tered lingually, sublingually or buccally (e.g. troches, lozenges), suppositories, ear and eye
ns (e.g. drops, ointments), vaginal capsules, aqueous suspensions (lotions, shaking mix-
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tures), lipophilic suspensions, ointments, creams, milks, pastes, foams, dusting s, transderrnal
eutic systems (e.g. patches), implants and stents.
In a preferred embodiment, the pharmaceutical ition comprising a compound of a (I)
as defined above is provided in a form suitable for oral administration. In another preferred embodi-
ment, the pharmaceutical ition comprising a compound of formula (I) as defined above is
provided in a form suitable for intravenous stration.
The compounds according to the ion can be converted into the recited application forms in a
manner known per se by mixing with inert, non-toxic, pharmaceutically le excipients. These
excipients include, inter alia, carriers (e.g. microcrystalline ose, e, mannitol), solvents
10 (e.g. liquid polyethylene glycols), emulsifiers (e.g. sodium dodecyl sulfate), surfactants (e.g. polyoxysorbitan
oleate), sants (e.g. polyvinylpyrrolidone), synthetic and natural polymers (e.g.
albumin), stabilizers (e. g. antioxidants such as, for example, ascorbic acid), colorants (e.g. nic
pigments such as, for example, iron oxides), and taste and/or odour masking agents.
A preferred dose of the compound of the present invention is the maximum that a patient can tolerate
15 and not develop serious side effects. Illustratively, the compound of the t invention may be
administered parenterally at a dose of about 0.001 mg/kg to about 1 mg/kg, preferably of about 0.01
mg/kg to about 0.5 mg/kg of body weight. On oral administration, an exemplary dose range is about
0.01 to 100 mg/kg, preferably about 0.01 to 20 mg/kg, and more preferably about 0.1 to 10 mg/kg
of body . Ranges intermediate to the above-recited values are also ed to be part of the
20 invention.
Nevertheless, actual dosage levels and time course of administration of the active ingredients in the
pharmaceutical compositions of the invention may be varied so as to obtain an amount of the active
ingredient which is effective to achieve the desired therapeutic response for a particular patient,
composition and mode of administration, without being toxic to the patient. It may therefore be
25 necessary where appropriate to deviate from the stated s, in particular as a function of age,
gender, body weight, diet and general health status of the patient, the bioavailability and
pharmacodynamic characteristics of the particular compound and its mode and route of administra-
tion, the time or interval over which administration takes place, the dose regimen selected, the
response of the individual patient to the active ingredient, the specific disease ed, the degree of
30 or the involvement or severity of the disease, the kind of concurrent treatment (i.e., the interaction of
the compound of the invention with other co—administered therapeutics), and other relevant
Dimstances.
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Thus, it may be satisfactory in some cases to manage with less than the aforementioned minimum
amount, Whereas in other cases the stated upper limit must be exceeded. Treatment can be initiated
with smaller dosages, which are less than the optimum dose of the compound. Thereafter, the dosage
may be increased by small ents until the optimum effect under the circumstances is reached.
For convenience, the total daily dosage may be divided and administered in individual portions
spread over the day.
The following exemplary embodiments illustrate the invention. The invention is not restricted to the
examples.
The percentages in the following tests and examples are, unless stated otherwise, by weight; parts
10 are by weight. Solvent ratios, dilution ratios and concentrations ed for liquid/liquid ons
are each based on volume.
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A. es
Abbreviations and Acronyms:
Ac acetyl
A020 acetic anhydride
AcOH acetic acid
aq. aqueous (solution)
Boc tert—butoxycarbonyl
br. broad (lH-NMR signal)
Bu butyl
cat. catalytic
conc. trated
d t (lH-NMR signal)
DBDMH l,3-dibromo-5,5—dimethylhydantoin
DCI direct al ionization (MS)
DCM dichloromethane
Dess-Martin periodinane 1,1,l-triacetoxy-1,1-dihydro-1,2-benziodoxol-3(lH)-one
DIPEA NN—diisopropylethylamine
DMF MN—dimethylformamide
DMSO dimethylsulfoxide
EI electron impact ionization (MS)
eq. equivalent(s)
ESI electro-spray ionization (MS)
Et ethyl
EtOAc ethyl acetate
GC-MS gas chromatography-coupled mass spectroscopy
h hour(s)
Hal halogen
lH-NMR proton nuclear ic resonance spectroscopy
HPLC high performance liquid chromatography
iPr isopropyl
LC—MS liquid chromatography-coupled mass spectroscopy
Me methyl
DH methanol
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MS mass spectroscopy
m/z mass-to-charge ratio (MS)
NBS N—bromosuccinimide
n—Bu n-butyl
NCS N—chlorosuccinimide
ofth. of theory (chemical yield)
Pd/C palladium on charcoal
PdC12(dppf) [l , l '—bis(diphenylphosphino)ferrocene] dichloropalladiumfll)
Pd(dba)2 bis(dibenzylideneacetone)pa11adium
Ph phenyl
PPA polyphosphoric acid
quartet (IH-NMR signal)
quant. quantitative (yield)
rac racemic
TLC retention factor
reverse phase (HPLC)
room temperature
retention time (HPLC)
singlet (lH—NMR )
ted ion)
triplet (IH-NMR signal)
tetra-n-butylammonium fluoride
tert—butyldimethylsilyl
N- [( lH-benzotriazol— l -yloxy)(dimethylamin0)methylene] -N—methyl—
methanaminium tetrafluoroborate
tBu tert—butyl
tert tertiary
TFA trifluoroacetic acid
THF tetrahydrofuran
TLC thin layer chromatography
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LC-MS and GC-MS methods:
Method 1 (LC-MS ):
Instrument: Micromass Quattro r with Waters UPLC Acquity; column: Thermo Hypersil
GOLD 1.9u, 50 mm X 1 mm; eluent A: 1 L water + 0.5 mL 50% aq. formic acid, eluent B: 1 L
acetonitrile + 0.5 ml 50% aq. formic acid; gradient: 0.0 min 90% A —> 0.1 min 90% A —> 1.5 min
10% A —> 2.2 min 10% A; temperature: 50°C; flow rate: 0.33 ; UV detection: 210 nm.
Method 2 gLC-MS ):
Instrument: Waters Acquity SQD UPLC System; column: Waters Acquity UPLC HSS T3 1.8u,
50 mm X 1 mm; eluent A: 1 L water + 0.25 mL 99% formic acid, eluent B: 1 L acetonitrile +
10 0.25 mL 99% formic acid; gradient: 0.0 min 90% A —> 1.2 min 5% A —> 2.0 min 5% A; oven:
50°C; flow rate: 0.40 mL/min; UV detection: 210-400 nm.
Method 3 (LC-MS ):
Instrument: Micromass Quattro Micro with HPLC Agilent 1100 Series; : YMC—Triart C18
3”, 50 mm X 3 mm; eluent A: 1 L water + 0.01 mol ammonium carbonate, eluent B: 1 L acetonitrile;
15 gradient: 0.0 min 100% A —> 2.75 min 5% A —> 4.5 min 5% A; oven: 40°C; flow rate: 1.25
mL/min; UV detection: 210 nm.
Method 4 (LC-MS ):
Instrument: Waters Acquity SQD UPLC System; column: Waters Acquity UPLC HSS T3 1.8u,
30 mm X 2 mm; eluent A: 1 L water + 0.25 mL 99% formic acid, eluent B: 1 L acetonitrile +
20 0.25 mL 99% formic acid; gradient: 0.0 min 90% A —> 1.2 min 5% A —> 2.0 min 5% A; oven:
50°C; flow rate: 0.60 mL/min; UV detection: 208—400 nm.
Method 5 (LC-MS ):
Instrument: Micromass o Premier with Waters UPLC y; column: Thermo il
GOLD 1.9u, 50 mm X 1 mm; eluent A: 1 L water + 0.5 mL 50% aq. formic acid, eluent B: 1 L
25 itrile + 0.5 ml 50% aq. formic acid; gradient: 0.0 min 97% A —> 0.5 min 97% A —> 3.2 min
5% A —> 4.0 min 5% A; temperature: 50°C; flow rate: 0.3 mL/min; UV detection: 210 mm.
D
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Method 6 gGC-MS ):
Instrument: Micromass GCT, GC6890; column: Restek RTX-35, 15 m x 200 um x 0.33 um;
constant flow with helium: 0.88 mL/min; oven: 70°C; inlet: 250°C; gradient: 70°C, 30°C/min —>
310°C (maintain for 3 min).
5 Method 7 (LC-MS ):
Instrument MS: Waters Micromass QM; Instrument HPLC: Agilent 1100 series; column: Agilent
ZORBAX Extend-C18 3.0 mm x 50 mm, 3.5u; eluent A: 1 L water + 0.01 mol um carbo—
nate, eluent B: 1 L itrile; gradient: 00 min 98% A —> 0.2 min 98% A —> 3.0 min 5% A —> 4.5
min 5% A; temperature: 40°C; flow rate: 1.75 mL/min; UV ion: 210 nm.
10 Method 8 (LC-MS ):
Instrument MS: Waters Micromass ZQ; Instrument HPLC: Agilent 1100 series; column: Agilent
ZORBAX Extend-C18 3.0 mm X 50 mm, 3.5u; eluent A: 1 L water + 0.01 mol ammonium carbo-
nate, eluent B: 1 L itrile; gradient: 0.0 min 98% A —> 0.2 min 98% A —> 3.0 min 5% A —) 4.5
min 5% A; temperature: 40°C; flow rate: 1.75 mL/min; UV ion: 210 nm.
15 General purification methods (see Table I and II below):
Method P1:
PreParative RP-HPLC ReProsil C18, gradient acetonitrile/0.2% aq. trifluoroacetic acid).
Method P2:
Preparative RP-HPLC (XBridge C18, gradient acetonitrile/water + 0.1% aq. ammonia).
20 Method P3:
Preparative RP-HPLC (Sunfire C18, gradient itrile/water).
Method P4:
Preparative C ge C18, gradient acetonitrile/water + 0.05% aq. ammonia).
Method P5:
25 The product obtained from the preceding RP—HPLC purification is dissolved in methanol and filtered
figh an anion exchange cartridge (Stratospheres SPE, PL-HC03 MP-resin). The cartridge is d with ol, and the filtrate is evaporated.
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Method P6:
A on of the product in ethyl acetate is washed with sat. aq. sodium hydrogencarbonate on
followed by sat. aq. sodium chloride solution, dried over magnesium sulfate, filtered and evaporated.
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Starting Materials and Intermediates:
Intermediate 1A
oxy—4-methylaniline
HC
NH
0
H30’
A mixture of 5-methylnitroanisol (265 g, 1.58 mol) and 10% Pd/C (39.75 g) in THF (1.32 L) was
stirred overnight at rt under 1 atm of hydrogen. Filtration over kieselguhr and evaporation afforded
216.1 g of the crude product which was used in the next step without further purification.
LC-MS (method 3): R = 2.39 min; MS (ESIpos): m/z = 138 (M+H)+
‘H—NMR (400 MHz, DMSO-ds): 5 = 6.45—6.63 (m, 3H), 4.46 (s, 2H), 3.72 (s, 3H), 2.16 (s, 3H)
10
Intermediate 2A
2—Methoxy—4-methylbenzenethiol
HC
SH
H30
Method 1:
15 A solution of sodium nitrite (7 g, 101.4 mmol) in water (25 ml) was added dropwise to a cooled
(0°-5°C) solution of ediate 1A (13.7 g, 100 mmol) in concentrated hloric acid (30 ml)
and water (85 ml). After stirring at 0°C for 10 min, sodium acetate (15 g, 182.8 mmol) was added.
The resulting mixture was added dropwise to a hot solution (70°-80°C) of potassium 0-ethyl dithio-
carbonate (30 g, 187.1 mmol) in water (140 ml), stirred between 70°C and 80°C for 1 h and then
20 (1 to rt. The mixture was ted twice with ethyl acetate, and the ed organic extracts
were dried over sodium sulfate and evaporated. The residue was taken up in a 1.3 M solution of
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_59_
potassium hydroxide in ethanol (300 m1). Glucose (8 g) was added, and the resulting mixture was
d for 3 h. Then, the ethanol solvent was evaporated, and the residue was diluted with water
and acidified with 6 N aqueous sulfuric acid. Zinc powder (15 g) was added carefully, and the
resulting e was heated to 50°C for 30 min. The mixture was then cooled to rt, diluted with
dichloromethane and filtered. The filtrate was extracted twice with dichloromethane, and the
combined c extracts were dried over sodium sulfate and evaporated affording 14.3 g of the
crude product which was used in the next step without further purification.
Method 2:
To 2.9 L of THF was added a warm solution of 355 ml (6.67 mol) concentrated sulfuric acid in
10 1.1 L of water. At 50°C, 293 g (1.33 mol) oxy—4-methylbenzenesulfonyl chloride were added
under stirring. Then, 521 g (7.97 mol) of zinc powder were added carefully in portions (foaming),
and the slightly exothermic reaction was cooled in a water bath to maintain a temperature of 50°-
55°C. The e was subsequently stirred at 55°C for 3 h. The progress of the reaction was
monitored by TLC (silica gel, petrolether/ethyl acetate 95:5). The reaction mixture was poured into
15 13.6 L of water, 6.8 L dichloromethane were added, and the mixture was stirred for 5 min. After
decanting from remaining zinc and phase separation, the s phase was extracted once more
with 6.8 L dichloromethane. The combined organic phases were washed with 10% brine, dried and
ated at 40°C under reduced pressure yielding 237 g of crude product. This material was used
in the next step without r purification. An analytical sample was obtained by silica gel
20 chromatography with petrolether/ethyl acetate (97:3) as eluent.
LC-MS (method 1): R = 1.21 min; MS (ESIneg): m/z = 153 (M-H)’
1H-NMR (400 MHz, DMSO-da): 8 = 7.17 (d, 1H), 6.81 (s, 1H), 6.66 (d, 1H), 4.63 (br. s, 1H), 3.80
(s, 3H), 2.26 (s, 3H) ppm.
Intermediate 3A
25 1 — [(2,2-Diethoxyethyl)sulfanyl] methoxy—4—methylbenzene
H3C
S/YOVCHs
H C’0 OVCH3
3
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237 g crude material from Intermediate 2A, 287 g (1.46 mol) bromoacetaldehyde-diethylacetal and
862 g (2.65 mol) caesium carbonate were suspended in 2 L DMF. The reaction temperature in-
creased initially to 40°C, then stirring was continued overnight at ambient temperature. The reaction
mixture was partitioned between 10 L of water and 2.7 L of ethyl acetate. The aqueous phase was
ted with another n of 2.7 L ethyl acetate. The combined organic phases were washed
with 10% brine, dried and evaporated. The resulting oily residue was purified by silica gel
chromatography with petrolether/ethyl acetate (95:5) as .
Yield: 236 g of an oil (66% ofth.)
GC—MS (method 6): R: = 6.03 min; MS (EIpos): m/z = 270 (M)+
10 ‘HTWMKMOONHE,DMSO«@:8=7J6(¢1HL682(&1HL673(¢1HL4550,HD,380@,
3H), 3.52-3.64 (m, 2H), 3.39—3.51 (m, 2H), 2.96 (d, 2H), 2.33 (s, 3H), 1.09 (t, 6H) ppm.
Intermediate 4A
7—Methoxy—5-methyl- 1 thiophene
H30
H C’0
3
15 To a refluxing mixture of 13 g polyphosphoric acid and 150 ml benzene was added dropwise a
solution of 5.2 g (19.2 mmol) of Intermediate 3A, and refluxing was continued overnight. After
cooling, the organic layer was ed, and the residue and flask were rinsed twice with DCM. The
combined organic phases were evaporated at reduced pressure. The e (3.76 g) was chromato-
graphed on silica gel with isohexane/0—10% ethyl acetate as eluent.
20 Yield: 1.69 g of an oil (49% ofth.)
GC-MS (method 6): R = 5.20 min; MS (EIpos): rn/z = 178 (M)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.68 (d, 1H), 7.34 (d, 1H), 7.28 (s, 1H), 6.78 (s, 1H), 3.93 (s,
3H), 2.43 (s, 3H) ppm.
D
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—61—
Intermediate 5A
(7—Methoxy—5-methylbenzothiophen—2—yl)bor0nic acid
H3C OH
\ /
B\
S OH
O
H C’
3
Under argon atmosphere, 26.7 g (150 mmol) of ediate 4A were dissolved in 270 ml of THF
and cooled to -70°C. Between -70°C and —65°C, 66 ml (165 mmol) of a 2.5 N solution of n—butyl-
lithium in hexane were added dropwise within 20 min, resulting in formation of a white precipitate.
After stirring for 1 h at -70°C, 41.5 ml (180 mmol) triisopropyl borate were added at this tem-
perature within 10 min (resulting in a thick suspension). Stirring was continued for 1 h at -70°C,
before the reaction mixture was allowed to warm up to rt overnight. Then, 400 m1 of saturated aq.
10 um chloride solution were added, the layers were separated, and the s layer was
extracted once more with THF. The ed organic phases were evaporated under reduced
pressure. To the e thus obtained, 200 ml of water and 86 m1 of 2 N aq. sodium hydroxide
solution were added. The solution was washed twice with DCM, then acidified with 35 ml of 3 M
sulfuric acid, and the resulting suspension was stirred vigorously for 1 h. The precipitate was filtered
15 offby suction and dried overnight at 45°C in vacuo.
Yield: 28.25 g of a colorless solid (94% pure by LC-MS, 80% of th.)
LC—MS (method 2): R. = 0.87 min; MS (ESIpos): rn/z = 223 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 6 = 7.17 (d, 1H), 6.81 (s, 1H), 6.66 (d, 1H), 4.63 (br. s, 1H), 3.80
(s, 3H), 2.26 (s, 3H) ppm.
20 Intermediate 6A
2—(7-Methoxy—5-methyl-1 -benzothiophen—2-yl)—6-methyl- 1 ,3 ,6,2-dioxazaborocane-4, 8-dione
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—62—
O
H3C
\ /OAR
B\ N—CH3
S 0%
H 0’0 0
3
6.3 g (28.4 mmol) of Intermediate 5A and 4.2 g (28.4 mmol) 2,2'-(methylimino)diacetic acid were
dissolved in a mixture of 45 ml DMSO and 400 ml toluene and refluxed for 16 h using a Dean—Stark
trap. After evaporation, the residue was taken up in ethyl acetate and washed three times with water
5 and once with brine. The organic phase was dried over magnesium sulfate and evaporated to a
volume of about 200 ml. A white solid precipitated which was filtered, washed with ethyl acetate and
dried in vacuo to give a first crop (5.52 g) of the title compound. A second crop (3.32 g) was ob-
tained after ation of the mother liquor and flash-chromatography over a layer of silica gel
using cyclohexane/0-100% ethyl acetate as the .
10 Yield: 8.84 g (overall purity 92.5% by LC—MS, 87% of th.)
LC-MS (method 2): R. = 0.93 min; MS (ESIpos): m/z = 334 (M+H)+
1H-NMR (400 MHz, DMSO-d6): 8 = 7.42 (s, 1H), 7.26 (s, 1H), 6.76 (s, 1H), 4.40 (d, 2H), 4.17 (d,
2H), 3.92 (s, 3H), 2.63 (s, 3H), 2.42 (s, 3H) ppm.
Intermediate 7A
15 Ethyl 4-aminopyrrolo[2,1 -f] [1 ,2,4]triazine—6—carboxylate
NH2
O
N/ /
K» /
N 0—\
CH3
A solution of 4-aminopyrrolo[2,1-f][1,2,4]triazine—6-carbonitrile (3.9 g, 24.5 mmol; preparation
described in PCT Int. Pat. Appl. WO 2007/064883) in ethanol (124.8 ml) was stirred with con-
centrated sulfuric acid (62.4 ml) at 80°C ght. After cooling to rt, the reaction mixture was
20 ged onto 800 g of ice and brought to pH 6—7 with concentrated aq. sodium hydroxide solution.1 acetate (500 ml) and romethane (500 ml) were added to the sion, and the resulting
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mixture was filtered over kieselguhr. The organic layer was ted from the aqueous layer. The
solid was dissolved in hot water (1 L), and the aqueous layer was ted twice with ethyl acetate.
The combined organic layers were dried over sodium sulfate and ated. The residue was
triturated with an isopropanol/diethylether mixture, and the solid was filtered off yielding 2.5 g (49%
ofth.) of the title compound.
LC-MS (method 2): R = 0.59 min; MS s): m/z = 206 (M+H)+
lH—NMR (400 MHz, DMSO-dg): 5 = 8.11—7.97 (m, 3H), 7.88 (s, 1H), 7.34 (br. s, 1H), 4.27 (q,
2H), 1.30 (t, 3H) ppm.
Intermediate 8A
10 (4-Aminopyrrolo [2, l -f] [l ,2,4]triazin—6-yl)methanol
NH2
N / /
b /
\N/N OH
An ice-cooled solution of Intermediate 7A (3.0 g, 14.5 mmol) in THF (30 ml) was treated with a 1 M
solution of lithium triethylborohydride in THF (58 ml) and d at rt for 45 min. The reaction
mixture was then cooled to 0°C, quenched with methanol, warmed slowly to rt and adsorbed on
15 kieselguhr. Purification by column chromatography over silica gel (dichloromethane/methanol 20:1
—> 4:1 gradient) afforded 2.21 g (92.5% of th.) of the title compound.
LC—MS (method 3): R = 1.46 min; MS (ESIpos): m/z = 164 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.75 (s, 1H), 7.64 (br. s, 2H), 7.50 (br. (1, 1H), 6.79 (br. d,
1H), 5.01 (t, 1H), 4.50 (d, 2H) ppm.
20 Intermediate 9A
lert—Butyl [2-cyano(hydroxymethyl)- lH—pyrrol- l -yl] carbamate
D
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0 CH3
JL JVCHs
Hi 0
CH,
N
CN
\/
HO
Under argon, a 1 M solution of methylmagnesiurn bromide in THF (13.3 ml) was added over 15 min
to a solution of tert—butyl (4-bromo-2—cyano—1H—pyrrolyl)carbamate (3.7 g, 12.09 mmol;
preparation described in PCT Int. Pat. Appl. WO 2007/064883, Intermediate AAE, Step 3) in THF
5 (37 ml) cooled to -60°C. After 30 min, a 1.6 M solution of n-butyllithium in hexane (15.1 ml, 242
mmol) was added over 10 min to the reaction, and the ing mixture was stirred between -60°C
and -40°C for 1 h. Then, paraformaldehyde (1.09 g, 36.3 mmol) was added to the reaction, and the
on mixture was slowly warmed to rt and stirred overnight. After quenching with sat. aq.
ammonium chloride solution, the aqueous layer was ted twice with ethyl e. The com-
10 bined organic phases were washed with sat. aq. sodium chloride solution, dried over sodium sulfate
and evaporated. Purification by column chromatography on silica gel (cyclohexane/ethyl acetate 2:1
—> 1:1) afforded 2.04 g (69% of th.) of the title compound.
LC—MS (method 4): R. = 0.70 min; MS (ESIpos): m/z = 238 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 10.79 (br. s, 1H), 7.09 (d, 1H), 6.86 (d, 1H), 4.97 (t, 1H),
15 4.28 (d, 2H), 1.45 (s, 9H) ppm.
Intermediate 10A
6—(Methoxymethyl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4—amine
NH2
N/ /
K N /
N/ O—CH3
Method I.‘
20 A solution of Intermediate 8A (1.3 g, 7.9 mmol) in THF (25 ml) was treated with thionyl chloride
i115 m1, 15.8 mmol) and stirred at rt for 2 h. After ation, the residue was dissolved in
anol (25 m1) and treated with sodium acetate (1.3 g, 15.8 mmol). The mixture was stirred for
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3 h at 65°C and then evaporated again. Purification by column chromatography on silica gel
oromethane/methanol 100:2) afforded 787 mg (55% of th.) of the title compound.
Method 2:
A solution of ediate 9A (6.14 g, 25.88 ) in a 4 M on of hydrogen chloride in 1,4-
dioxane (15 ml) was stirred at rt for 5 h. After dilution with methanol (73 ml), stirring at rt was
continued overnight. Then, potassium phosphate (54.9 g, 258.65 mmol) and formamidinium acetate
(13.46 g, 129.32 mmol) were added, and the resulting mixture was stirred at 65°C for 17 h. The
reaction mixture was evaporated, sat. aq. sodium chloride solution was added, and the mixture was
extracted with dichloromethane followed by ethyl acetate. The combined organic phases were dried
10 over sodium e and evaporated. Purification by column chromatography on silica gel (dichloro-
methane/methanol 40:1 —> 20:1) afforded 2.36 g (49% of th.) of the title compound.
LC-MS (method 3): R. = 1.72 min; MS (ESIpos): m/z = 179 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 8 = 7.77 (s, 1H), 7.69 (br. s, 2H), 7.57 (s, 1H), 6.81 (s, 1H), 4.42
(s, 2H), 3.25 (s, 3H) ppm.
15 Intermediate 11A
o(methoxymethyl)pyrrolo[2, 1 —f] [1 riazinecarbaldehyde
Phosphoryl de (13.7 ml, 147.18 mmol) was added to a solution of Intermediate 10A (5.24 g,
29.43 mmol) in DMF (80 ml) at 0°C. The resulting mixture was d at 60°C for 8 h, then care-
20 fully quenched with water and neutralized with 4 M aq. sodium hydroxide solution. The aqueous
layer was extracted with ethyl e. The combined organic phases were washed with sat. aq.
sodium chloride solution, dried over magnesium sulfate and evaporated. A solution of the residue in
methanol (50 ml) was treated with sodium acetate (2.41 g, 29.43 mmol) and refluxed overnight. The
reaction mixture was diluted with water and extracted with ethyl acetate. The combined organic
25 Des were washed with sat. aq. sodium chloride solution, dried over magnesium sulfate and
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_66_
evaporated, affording 2.66 g of the crude product which was used in the next step without further
purification.
LC-MS (method 4): R = 0.50 min; MS (ESIpos): m/z = 207 (M+H)+
1H-NMR (400 MHz, s): 8 = 10.35 (s, 1H), 8.20 (br. s, 2H), 8.07 (s, 1H), 7.06 (s, 1H),
4.72 (s, 2H), 3.39 (s, 3H) ppm.
Intermediate 12A
4-Aminobromo(methoxymethyl)pyrrolo[2,1-f][1,2,4]triazinecarbaldehyde
A solution of Intermediate 11A (crude, 2.66 g) in DMF (30 ml), cooled to -30°C, was treated with a
10 solution of N—bromosuccinimide (NBS; 2.52 g, 14.19 mmol) in DMF (14 ml). The resulting mixture
was slowly warmed to 0°C. After 1 hour, the mixture was warmed to rt, stirred for further 15 min
and then quenched with 1 M aq. sodium thiosulfate solution. The precipitate was filtered off and
washed with ethyl acetate, affording 1.1 g (100% purity, 30% of th.) as a first crop of the title com-
pound. The remaining filtrate was extracted with ethyl acetate. The combined organic phases were
15 washed with sat. aq. sodium chloride solution, dried over sodium e and evaporated. Purification
of the residue by column chromatography on silica gel (cyclohexane/ethyl acetate 1:1 —> 1:3) affor-
ded further 1.39 g (70% , 26% of th.) of the title nd.
LC—MS (method 2): R: = 0.67 min; MS (ESIpos): m/z = 283/285 (M+H)+
1H-NMR (400 MHz, DMSO-da): 5 = 10.36 (s, 1H), 8.63 (br. s, 1H), 8.13 (s, 1H), 7.23 (br. s, 1H),
20 4.64 (s, 2H), 3.26 (s, 3H) ppm.
ediate 13A
4—Amino(methoxymethyl)(7-methoxy—5—methylbenzothiophen—2-yl)pyrrolo [2, 1 -f] [1 ,2,4] —
triazine—7—carbaldehyde
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Under argon, a degassed 0.5 M aq. potassium phosphate solution (9.9 ml) was added to a solution of
Intermediate 12A (710 mg, 2.49 mmol), Intermediate 5A (921 mg, 3.73 mmol) and ino-
biphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine (1:1; 196
mg, 249 umol; see S.L. Buchwald et al., J. Am. Chem. Soc. 132 (40), 14073-14075 (2010)) in
ed THF (28.4 ml). The resulting mixture was stirred at 60°C for 2 h and then evaporated.
Purification of the residue by column chromatography on silica gel (cyclohexane/ethyl actetate 5:1
—> 121) afforded 550 mg (51% of th.) of the title compound.
LC—MS d 2): R. = 1.06 min; MS (ESIpos): m/z = 383 (M+H)+
10 ‘H-NMR (400 MHz, DMSO-ds): 5 = 10.50 (s, 1H), 8.43 (br. s, 1H), 8.21 (s, 1H), 7.42 (s, 1H),
7.33 (s, 1H), 6.87 (s, 1H), 6.09 (br. s, 1H), 4.58 (s, 2H), 3.96 (s, 3H), 3.19 (s, 3H), 2.46 (s, 3H)
Intermediate 14A
6-(Ethoxymethyl)pyrrolo [2, 1 -f] [1 ,2,4]triazinamine
NH2
N/ /
kw / 01
CH
15 3
Method 1 .'
D1 suspension of 2 g (12.2 mmol) of Intermediate 8A in 40 ml THF were added 1.78 ml (24.4
mmol) thionyl chloride at rt within 20 sec. The mixture was stirred for 1.5 h, then evaporated to
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—68—
dryness, and the residue was dissolved in 40 ml ethanol. 2 g (24.4 mmol) sodium acetate were added,
and the mixture was stirred at 70°C for 1 h 45 min. The reaction mixture was evaporated again, and
sat. aq. sodium hydrogencarbonate solution was added. The mixture was extracted five times with
ethyl acetate. The ed organic phases were washed with sat. aq. sodium chloride solution,
dried with magnesium sulfate and evaporated to dryness, giving 2.02 g of crude product which was
purified by column chromatography on silica gel with dichloromethane/methanol (0-2%) as the
.
Yield: 1.37 g (58% ofth.).
Method 2:
10 Step 1: A solution of ediate 9A (2.3 g, 9.69 mmol) in 1,4-dioxane (5 ml) was treated with a
4 M solution of hydrogen chloride in 1,4-dioxane (24 m1, 96.9 mmol) and stirred at rt for 130 min.
Then, the suspension was filtered, and the precipitate was washed with 1,4-dioxane (5 ml) and dried
in vacuo yielding 1.01 g (54% of th.) of the intermediate compound 1-amino(chloromethyl)-1H-
pyrrole—2-carbonitrile hydrochloride.
15 Step 2: Freshly prepared 1-amino(chloromethyl)-lH-pyrrole-Z-carbonitrile hydrochloride from
Step 1 (0.3 g, 1.82 mmol) was dissolved in ethanol (10 m1) and stirred at rt for 5 min. The clear
solution was treated with idine acetate (813 mg, 7.81 mmol) and potassium phosphate
(1.66 g, 7.81 mmol) and stirred first at rt for 3 days, then at 80°C for 10.5 h. More formamidine
acetate (488 mg, 4.69 mmol) was added, and the mixture was stirred for further 18 h at 80°C. The
20 mixture was then cooled to rt, and water and ethyl acetate were added. The organic phase was sepa-
rated, and the aqeous phase was extracted twice with ethyl e. The combined organic phases
were washed with sat. aq. sodium chloride solution, dried with magnesium sulfate and evaporated.
The residue was dissolved in a mixture of methanol and dichloromethane, ed on diatomaceous
earth, dried in vacuo and finally purified by chromatography on silica gel ent 0-10%
25 methanol/dichloromethane) yielding 260 mg (78% of th.) of the title compound.
LC-MS (method 3): R = 2.02 min; MS (ESIpos): m/z = 193 (M+H)+
lH-NMR (400 MHz, DMSO-ds): 5 = 7.77 (s, 1H), 7.59-7.74 (br. s, 2H), 7.56 (s, 1H), 6.82 (s, 1H),
5.76 (s, 1H), 4.46 (s, 2H), 3.46 (q, 2H), 1.13 (t, 3H) ppm.
Intermediate 15A
30 unino(ethoxymethyl)pyrrolo [2,1 -f] [1 ,2,4]triazinecarba1dehyde
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To a solution of 2.1 g (10.9 mmol) of Intermediate 14A in 40 ml dry DMF, 5.1 ml (54.6 mmol)
phosphoryl chloride were added dropwise at 0°C under an argon atmosphere. The mixture was
stirred at 60°C for 10 h. Then, water was added carefully, and the mixture was stirred at t
ature until all reactive intermediates were destroyed (HPLC control). The acidic solution was
neutralized with 1 M aq. sodium hydroxide on and extracted three times with ethyl acetate. The
combined organic phases were washed with sat. aq. sodium de solution, dried over magnesium
sulfate and evaporated at reduced pressure.
Yield: 1.94 g (purity 90%, 81% of th.)
10 LC—MS (method 5): R1 = 1.49 min; MS (ESIpos): m/z = 221 (M+H)+
‘H-NMR (400 MHZ, DMSO-ds): 5 = 10.35 (s, 1H), 8.14-8.26 (m, 2H), 8.07 (s, 1H), 7.07 (s, 1H),
4.76 (s, 2H), 3.58 (q, 2H), 1.20 (t, 3H) ppm.
Intermediate 16A
4-Aminobromo(ethoxymethyl)pyrrolo[2, 1 -f] [1 ,2,4]triazinecarbaldehyde
15
To a solution of 73 g (0.33 mol) of Intermediate 15A in 1.9 L DMF was added dropwise a solution
of 65 g (0.37 mol) NBS in 200 ml DMF at —15°C. The mixture was d to warm to 0°C and
stirred for 3 h at this temperature. The reaction mixture was poured into 2% aq. sodium thiosulfate
solution under stirring, and the precipitate was filtered off, washed with water and dried over
20 aphorous pentoxide in vacuo.
Yield: 85.6 g (86% ofth.)
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LC-MS (method 2): R = 0.76 min; MS s): m/z = 299/301 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): 6 = 10.36 (s, 1H), 8.62 (br. s, 1H), 8.13 (s, 1H), 7.22 (br. s, 1H),
4.68 (s, 2H), 3.49 (q, 2H), 1.10 (t, 3H) ppm.
Intermediate 17A
4—Amino(ethoxymethyl)(7-methoxy—5—methyl- l -benzothiophen—2-yl)pyrrolo[2, 1 -f] [1 ,2,4]—
ne—7-carbaldehyde
Under an argon atmosphere, 714 mg (purity 85%, 2.03 mmol) of Intermediate 16A, 946 mg (2.84
mmol) of Intermediate 6A and 160 mg (0.2 mmol) (2'-aminobiphenylyl)(chloro)palladium—
10 dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine (1:1; see S.L. Buchwald et al., J. Am.
Chem. Soc. 132 (40), 14073-14075 (2010)) were suspended in 15.5 ml THF. Then, 15.5 ml of a
ed 0.5 M aq. potassium phosphate on were added, and the mixture was stirred at 50°C
for 16 h. After addition of water, the mixture was extracted with ethyl acetate, and the combined
organic phases were dried over magnesium sulfate and evaporated under reduced pressure. The
15 residue was purified by column chromatography on silica gel (100 g) with 10—50% ethyl acetate/
cyclohexane as the eluent.
Yield: 452 mg (75% pure by HPLC, 42% of th.)
LC-MS (method 5): R = 2.38 min; MS (ESIpos): m/z = 397 (M+H)+
‘H—NMR (400 MHz, DMSO-ds): 6 = 10.50 (s, 1H), 8.42 (br. s, 1H), 8.21 (s, 1H), 7.43 (s, 1H),
20 7.33 (s, 1H), 6.87 (s, 1H), 6.07 (br. s, 1H), 4.63 (s, 2H), 3.96 (s, 3H), 3.40 (q, 2H), 2.46 (s, 3H),
D (t, 3H) ppm.
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Intermediate 18A
(4—Amino-5,7-dibromopyrrolo[2,1-f] [1 riazin—6-yl)methanol
NH2 Br
N / /
Br
A solution of Intermediate 8A (5 g, 30.4 mmol) in THF (100 ml) was treated with 1,3-dibromo-5,5-
dimethylhydantoin (9.58 g, 33.5 mmol) and stirred at rt for 2 h. The precipitate was filtered off and
dried in vacuo to afford 6.60 g (64% of th.) of the title compound.
LC-MS (method 2): R. = 0.56 min; MS (ESIpos): m/z = 321/323/325 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.23 (br. s, 1H), 7.96 (s, 1H), 6.94 (br. s, 1H), 5.09 (br. s,
1H), 4.43 (s, 2H) ppm.
10 ediate 19A
(4—Aminobromopyrrolo[2, 1 -f] [1 ,2,4]triazin—6—yl)methanol
NH2 Br
N / /
k\N/N OH
A suspension of Intermediate 18A (3.7 g, 11.5 mmol) in THF (800 ml) was heated under stirring
until complete dissolution. The mixture was then cooled to -78°C, and a 1.6 M solution of n-butyl-
15 lithium in hexanes (20 ml, 32.1 mmol) was added dropwise. After 5 min, a further portion of 1.6 M
n-butyllithium solution (1.5 ml, 2.29 mmol) was added. The resulting mixture was stirred at -78°C
for 5 min, then quenched with methanol (5 ml) and warmed to rt. The reaction mixture was d
with sat. aq. um chloride solution, sat. aq. sodium hydrogencarbonate solution, sat. aq.
sodium chloride solution and ethyl acetate. After phase separation, the organic layer was washed
20 with sat. aq. sodium chloride solution. The combined s phases were re-extracted with ethyl
acetate. The combined organic phases were washed again with sat. aq. sodium chloride solution,
Di over magnesium sulfate and evaporated to afford 2.87 g of the crude product which was used
in subsequent steps without fithher purification.
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LC-MS (method 3): R = 1.73 min; MS (ESIpos): m/z = 243/245 (M+H)+
1H—NMR (400 MHz, DMSO-da): 5 = 8.41—7.89 (br. s, 1H), 7.82 (s, 1H), 7.66 (s, 1H), 7.13-6.48
(br. s, 1H), 5.11 (t, 1H), 4.45 (d, 2H) ppm.
Intermediate 20A
[4—Amino(7-methoxymethylbenzothiophen—2-yl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—6-yl]methanol
A suspension of Intermediate 19A (70% purity, 2.52 g, 7.26 mmol), Intermediate 6A (3.63 g, 10.9
mmol) and caesium fluoride (5.51 g, 36.3 mmol) in a THF/water mixture (10:1; 80 ml) was
degassed under argon. tert—butylphosphino)-N,N—dimethylaniline-dichloropalladium (2:1;
10 176 mg, 0.248 mmol) was added, and the resulting mixture was degassed again and stirred at 50°C
for 16 h. The reaction mixture was then washed with sat. aq. sodium chloride on, and the
organic layer was separated, dried over ium sulfate, filtered and evaporated. The residue was
suspended in methanol, and the resulting solid was filtered off and dried in vacuo to afford 1.97 g
(90% purity, 72% of th.) of the title compound.
15 LC-MS (method 2): R: = 0.85 min; MS (ESIpos): m/z = 340 (M+H)+
lH—NMR (400 MHz, DMSO-ds): 5 = 7.91 (s, 1H), 7.5-8.1 (br. s, 1H), 7.72 (s, 1H), 7.35 (s, 1H),
7.30 (s, 1H), 6.84 (s, 1H), 5.5-6.0 (br. s, 1H), 5.06 (t, 1H), 4.49 (d, 2H), 3.95 (s, 3H), 2.45 (s, 3H)
Intermediate 21A
20 6—(Methoxymethyl)(7-methoxymethyl— 1 —benzothiophen—2-yl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4—
amine
D
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A solution of Intermediate 20A (400 mg, 1.17 mmol) in dichloromethane (12 ml) was treated with
thionyl chloride (128 pl, 1.76 mmol) and stirred at It for 15 min. After evaporation, the e was
taken up in methanol (12 ml) and treated with DIPEA (409 ul, 2.35 mmol). The mixture was
refluxed overnight and then evaporated again. ation by column chromatography on silica gel
(dichloromethane/methanol 98:2 —> 95:5) ed 388 mg (93% of th.) of the title compound.
LC—MS d 2): R = 1.00 min; MS (ESIpos): m/z = 355 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): 8 = 7.93 (s, 1H), 7.82 (s, 1H), 7.35 (s, 1H), 7.31 (s, 1H), 6.84 (s,
1H), 4.38 (s, 2H), 3.95 (s, 3H), 3.22 (s, 3H), 2.45 (s, 3H) ppm.
10 Intermediate 22A
6—(Ethoxymethyl)(7-methoxymethylbenzothiophen—2-yl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amine
Intermediate 20A (200 mg, 587 umol) in dichloromethane (5 ml) was treated with thionyl chloride
(64 ul, 881 umol) and stirred at It for 15 min. After evaporation, the residue was refluxed in ethanol
15 D11) for 1 h, then treated with DIPEA (204 ul, 1.17 mmol) and refluxed again ght. The
reaction mixture was evaporated, and the crude product was purified by column chromatography on
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silica gel (dichloromethane/methanol 98:2 —> 95:5) affording 202 mg (90% of th.) of the title com-
pound.
LC-MS (method 5): R = 2.32 min; MS (ESIpos): m/z = 369 (M+H)+
1H-NMR (400 MHz, DMSO-da): 5 = .59 (br. s, 1H), 7.93 (s, 1H), 7.81 (s, 1H), 7.35 (s, 1H),
7.30 (s, 1H), 6.84 (s, 1H), 6.20-5.50 (br. s, 1H), 4.41 (s, 2H), 3.95 (s, 3H), 3.41 (q, 2H), 2.45 (s,
3H), 1.08 (t, 3H) ppm.
Intermediate 23A
tert—Butyl 4- ino(hydroxymethyl)—5—(7—methoxymethylbenzothiophen—2—yl)pyrrolo-
[2,1-f][1,2,4]triazin—7-yl]methyl}piperazine—1—carboxylate
10
A solution of Intermediate 20A (9.5 g, 27.9 mmol) in acetic acid (136.8 ml) was treated with tert-
butyl zine-l-carboxylate (6.24 g, 33.49 mmol) and 37% aq. formaldehyde solution (2.5 ml,
33.49 mmol). The mixture was stirred at 60°C for 2.5 h. After evaporation, the residue was taken up
in ethyl acetate, and the e was washed twice with sat. aq. sodium hydrogencarbonate solution,
15 dried over sodium sulfate and evaporated. The residue was triturated in boiling ethanol (100 ml).
The solid was filtered off and washed with ethanol and diethylether affording 9.70 g (58% of th.) of
the title compound.
LC—MS (method 2): R: 0.88 min; MS (ESIpos): m/z = 539 (M+H)+
D
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1H-NMR (400 MHz, CDC13)I 6 = 7.94 (s, 1H), 7.13-7.35 (m, 2H, overlap with CHC13 peak), 6.67
(s, 1H), 5.86 (br. s, 1H), 5.54 (br. s, 2H), 4.68 (s, 2H), 4.08 (s, 2H), 4.00 (s, 3H), 3.45 (br. s, 4H),
2.59-2.48 (m, 7H), 1.45 (s, 9H) ppm.
Intermediate 24A
tert—Butyl 4-( no(7-methoxymethyl— 1 -benzothiophen—2-yl) [(2-methoxyoxoethoxy)-
methyl]pyrrolo[2, 1 -f] [1 ,2,4]triazin—7-yl}methyl)piperazinecarboxylate
A on of Intermediate 23A (300 mg, 556 umol) in dichloromethane (12 ml) was d with
thionyl chloride (81 ul, 1.11 mmol) and stirred at rt for 15 min. After evaporation, the residue was
10 dissolved in freshly distilled methylglycolate (2.5 ml) and treated with DIPEA (485 pl, 2.78 mmol).
The mixture was stirred at 70°C for 2 h, then evaporated again, and excess methylglycolate was
removed by distillation. Purification of the residue by column chromatography on silica gel
(cyclohexane/ethyl acetate 1:5) afforded 136 mg (33% of th.) of the title compound.
LC-MS d 2): R. = 0.88 min; MS (ESIpos): m/z = 611 (M+H)+
15 1H-NMR (400 MHz, DMSO-ds): 8 = 7.99 (s, 1H), 7.39 (s, 1H), 7.31 (s, 1H), 6.85 (s, 1H), 4.58 (s,
2H), 4.11 (s, 2H), 3.96 (s, 3H), 3.93 (s, 2H), 3.57 (s, 3H), 3.30-3.24 (m, 4H), 2.45-2.38 (m, 7H),
1.39 (s, 9H) ppm.
D
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—76—
Intermediate 25A
tert—Butyl 4- {[4-aminoformyl(7-methoxy—5-methylbenzothiophen—2-yl)pyrrolo[2, 1 —f] [1 ,2,4] -
triazin—7-yl]methyl }piperazinecarboxylate
A solution of ediate 23A (300 mg, 556 umol) in dichloromethane (4.2 ml) was treated with
Dess-Martin periodinane (1,1,1-triacetoxy-1,1-dihydro-1,2-benziodoxol-3(1H)-one; 307 mg, 724
umol) and stirred at rt for 2 h. The reaction e was quenched With sat. aq. sodium hydrogen-
carbonate on and sat. aq. sodium thiosulfate solution (1:1) and stirred at rt for 30 min. The
aqueous layer was extracted three times with dichloromethane, and the ed organic layers were
10 dried over magnesium sulfate and evaporated. Purification by column tography on silica gel
(cyclohexane/ethyl acetate 1:1 —> 100% ethyl acetate) afforded 273 mg (87% of th.) of the title
compound.
LC—MS (method 2): R = 0.87 min; MS (ESIpos): m/z = 537 (M+H)+
1H—NMR (400 MHZ, DMSO-ds): 8 = 10.02 (s, 1H), 8.44-8.18 (br. s, 1H), 8.08 (s, 1H), 7.51 (s,
15 1H), 7.32 (s, 1H), 6.88 (s, 1H), 6.01-5.74 (br. s, 1H), 4.16 (s, 2H), 3.96 (s, 3H), 3.30—3.22 (m, 4H),
2.48-2.40 (m, 7H), 1.38 (s, 9H) ppm.
Intermediate 26A
4—Amino(7-methoxy—5-methylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo [2, 1 —f] —
[1 ,2,4]triazinecarbaldehyde bis(formiate)
D
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X 2 HCOOH
A solution of ediate 23A (80 mg, 148 umol) in THF (3.9 ml) was treated with Dess—Martin
periodinane (1,1,l-triacetoxy-l,1-dihydro-1,2—benziodoxol-3(1H)-one; 94 mg, 222 umol) and stirred
at rt for 30 min. The on mixture was quenched with sat. aq. sodium hydrogencarbonate
solution and sat. aq. sodium thiosulfate solution (1 :1). The aqueous layer was extracted three times
with ethyl acetate, and the combined organic layers were dried over magnesium sulfate and
evaporated. The residue was dissolved in a 4 M solution of hydrogen chloride in 1,4-dioxane (4 m1)
and stirred at rt for 1 h. After evaporation, the residue was purified by preparative RP-HPLC
(Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) ing 34 mg (52% of th.) of
10 the title compound.
LC—MS (method 2): R. = 0.78 min; MS (ESIpos): m/z = 437 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 10.02 (s, 1H), 8.29 (br. s, 2H), 8.09 (s, 1H), 7.50 (s, 1H),
7.33 (s, 1H), 6.88 (s, 1H), 4.17 (s, 2H), 3.96 (s, 3H), 2.90-2.81 (m, 4H), 2.63-2.56 (m, 4H), 2.46
(s, 3H) ppm.
15 Intermediate 27A
tert—Butyl 4-( {4-amino(7-methoxy—5-methyl— 1 -benzothiophen—2-yl) [(3 -oxopiperazin— 1 —yl)-
methyl]pyrrolo [2, 1 -f] [1 riazin—7-yl}methyl)piperazinecarboxylate
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—78—
A solution of Intermediate 25A (185 mg, 344 umol) in THF (4.6 ml) was treated With 2-oxo-
piperazine (344 mg, 3.4 mmol), sodium triacetoxyborohydride (365 mg, 1.7 mmol) and acetic acid
(39 ul, 689 umol). The resulting mixture was stirred at rt for 2 h, then adsorbed on kieselguhr and
purified by column chromatography on silica gel (dichloromethane —> dichloromethane/methanol
100:8) affording 221 mg (quant.) of the title nd.
LC-MS (method 4): R. = 0.77 min; MS (ESIpos): m/z = 621 (M+H)+.
Intermediate 28A
N—Ethylethanaminium o {[4-(tert—butoxycarbonyl)piperazin— 1 -yl]carbonyl} (7-methoxy-
10 5—methylbenzothiophen—2-yl)pyrrolo[2,1—f][1 ,2,4]triazinecarboxylate
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A on of Intermediate 25A (70 mg, 130 umol) in THF/water (10:1, 4.85 ml) was treated with a
2 M solution of 2-methylbuten in THF (521 pl, 1.04 mmol) and sodium dihydrogenphosphate
(107 mg, 783 umol) and stirred at rt for 5 min. Sodium chlorite (70 mg, 783 umol) was added, and
the resulting mixture was stirred at rt overnight. After dilution with water, the aqueous phase was
extracted three times with ethyl acetate. The combined organic layers were dried over sodium sulfate
and evaporated, and the residue was purified by preparative RP-HPLC (XBridge C18, gradient 5-
50% itrile/water + 0.05% lamine) affording 18 mg (21% of th.) of the title nd.
LC-MS (method 1): R = 1.14 min; MS (ESIpos): m/Z = 567 (M+H)+
1H—NMR (400 MHz, DMSO-ds): inter al. 8 = 8.26-7.89 (br. s, 1H), 7.94 (s, 1H), 7.33 (s, 1H), 7.28
10 (s, 1H), 6.83 (s, 1H), 5.64-5.33 (br. s, 1H), 3.95 (s, 3H), 2.80 (q, 4H), 2.45 (s, 3H), 1.40 (s, 9H),
1.09 (t, 6H) ppm.
Intermediate 29A
tert—Butyl 4- { [4-amino(azidomethyl)(7—methoxy—5-methylbenzothiophen—2-yl)pyrrolo—
][1,2,4]triazin—7-yl]methyl}piperazine—1—carboxylate
15
A solution of Intermediate 23A (150 mg, 0.278 mmol) in dichloromethane (7.5 ml) was treated with
thionyl chloride (40 ul, 0.56 mmol) and stirred at rt for 15 min. After evaporation, the residue was
dissolved in DMF (6 ml) and treated with sodium azide (362 mg, 5.57 mrnol) and sodium iodide
6% times with ethyl acetate. The combined organic layers were washed with water and with sat.mg, 1.39 mmol). The mixture was heated to 80°C for 1 h, then d with water and extracted 20
aq. sodium chloride solution, dried over magnesium sulfate and evaporated. Purification by column
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_80_
chromatography on silica gel hexane/ethyl acetate 98:2 —> 100% ethyl acetate) afforded 95.8
mg (57% of th.) of the title compound.
LC-MS (method 4): R. = 0.99 min; MS (ESIpos): m/z = 564 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.20-7.80 (br. s, 1H), 8.01 (s, 1H), 7.39 (s, 1H), 7.33 (s, 1H),
6.86 (s, 1H), 6.05-5.55 (br. s, 1H), 4.50 (s, 2H), 3.96 (s, 3H), 3.94 (s, 2H), 3.32-3.25 (m, 4H), 2.45
(s, 3H), 2.43-2.36 (m, 4H), 1.39 (s, 9H) ppm.
Intermediate 30A
tert—Butyl 4- {[6-(acetamidomethyl)-4—amino—5—(7-methoxy—5-methylbenzothiophen—2—yl)pyrrolo-
[2,1-f] [1,2,4]triazin—7-yl]methyl}piperazine—1—carboxylate
10
A e of Intermediate 29A (320 mg, 567 umol), 10% Pd/C (320 mg) and acetic anhydride
(106 pl, 1.13 mmol) in methanol (32 ml) was stirred for 90 min under 1 atm of hydrogen at It. The
mixture was then filtered through kieselguhr, and the filtrate was evaporated. Purification by column
chromatography on silica gel hexane/ethyl acetate 1:1 —> 100% ethyl acetate) afforded 440 mg
15 (quant.) of the title compound.
LC-MS (method 2): R. = 0.91 min; MS (ESIpos): m/z = 580 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 8 = 8.02—7.97 (m, 2H), 7.38 (s, 1H), 7.31 (s, 1H), 6.85 (s, 1H),
(br. (1, 2H), 3.95 (s, 3H), 3.89 (s, 2H), .24 (m, 4H), 2.45 (s, 3H), 2.43-2.36 (m, 4H),
1.74 (s, 3H), 1.39 (s, 9H) ppm.
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—81—
Intermediate 31A
7— etylpiperazin— 1 -yl)methyl] arnjno—5—(7—methoxymethylbenzothiophen—2—yl)pyrrolo-
[2,1 -f] [1 ,2,4]triazinecarbaldehyde
A solution of Example 55 (678 mg, purity 89%, 1.26 mmol) in dichloromethane (4 ml) containing
molecular sieves (4A) was treated with Dess-Martin periodinane (1,1,1-triacetoxy-1,1-dihydro-1,2-
benziodoxol-3(1H)-one; 623 mg, 1.47 mmol) and stirred at rt for 5 min. The reaction e was
then adsorbed on diatomaceous earth and purified by column chromatography on silica gel (gradient
of 30-100% ethyl acetate/cyclohexane, then 0-10% methanol/dichloromethane) ng 449 mg
10 (49% of th.) of the title compound.
LC-MS (method 4): R = 0.70 min; MS (ESIpos): m/z = 479 (M+H)+.
Intermediate 32A
4- {[4-Amino(azidomethyl)(7-methoxymethylbenzothiophen—2-y1)pyrrolo[2, 1 -f] [1 ,2,4] -
triazin—7-yl]methyl}piperazin—2-one
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A solution of Example 13 (59 mg, 130 umol) in dichloromethane (3.5 ml) was treated with thionyl
chloride (19 ul, 261 umol) and stirred at rt for 15 min. After ation, the residue was dissolved
in DMF (2.8 ml) and treated with sodium iodide (97 mg, 652 umol) and sodium azide (169 mg, 2.6
mmol). The mixture was stirred at 80°C for 1 h. After on with sat. aq. sodium chloride
solution, the aqueous phase was extracted four times with ethyl acetate, and the combined organic
layers were dried over magnesium sulfate and evaporated. Purification by column chromatography
on silica gel oromethane/methanol 98:2 —> 90:10) ed 35 mg (56% of th.) of the title
compound.
10 LC-MS (method 5): R = 2.04 min; MS (ESIpos): m/z = 478 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.02 (s, 1H), 7.75 (br. s, 1H), 7.41 (s, 1H), 7.33 (s, 1H), 6.86
(s, 1H), 4.51 (s, 2H), 4.01 (s, 2H), 3.96 (s, 3H), 3.16-3.08 (m, 2H), 3.04-2.98 (m, 2H), 2.65—2.58
(m, 2H), 2.45 (s, 3H) ppm.
Intermediate 33A
15 4—Amino(7-methoxy—5-methylbenzothiophen—2-yl)(morpholinylmethyl)pyrrolo[2, 1 —f] -
[1,2,4]triazinecarbaldehyde
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A solution of Example 50 (710 mg, purity 70%, 1.13 mmol) in dichloromethane (5 ml) containing
molecular sieves (4A) was treated with Dess—Martin periodinane (1,1,1-triacetoxy—1,1-dihydro-1,2-
benziodoxol-3(lH)-one; 623 mg, 1.47 mrnol) and stirred at rt for 5 min. The reaction mixture was
then adsorbed on diatomaceous earth and purified by column chromatography on silica gel (gradient
of 30—100% ethyl acetate/cyclohexane) yielding 386 mg (72% of th.) of the title compound.
LC-MS d 2): R: = 0.76 min; MS (ESIpos): m/z = 438 (M+H)+.
Intermediate 34A
(4—Aminobromopyrrolo[2, 1 -f] [1 ,2,4]triazin—6-yl)methanol
NH2
OH
N/ /
K N /
N/
Br
10
A solution of 1,3-dibromo-5,5-dimethylhydantoin (87 mg, 0.305 mmol) in THF (1 ml) was added
dropwise to a solution of Intermediate 8A (100 mg, 0.609 mmol) in THF (4 ml) and methanol (2 ml)
at -78°C. The mixture was stirred at -78°C for 16 h, then d with water and extracted with ethyl
acetate. The combined organic layers were washed with sat. aq. sodium chloride solution, dried over
15 magnesium sulfate and evaporated. Purification by column chromatography on silica gel
(dichloromethane/methanol 20:1 —> 10:1) afforded 55 mg (32% of th.) of the title compound.
Dws (method 3): Rt = 1.71 min; Ms (ESIpos): m/z = 243/245 (M+H)+
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—84—
‘H-NMR (400 MHz, DMSO-ds): 8 = 7.74-7.94 (m, 3H), 7.04 (s, 1H), 5.12 (t, 1H), 4.48 (d, 2H)
ediate 35A
7—Bromo( { [tert—butyl(dimethyl)silyl]oxy}methyl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amine
NHZ (In—I3 CH3
N/ / O_?i+CH3
K ,N / CH
.
N
Br
5
A solution of Intermediate 34A (885 mg, 3.64 mmol) in DMF (11 ml) was treated with tert—butyl-
dimethylsilyl de (823 mg, 5.46 mmol) and imidazole (743 mg, 10.92 mmol) and stirred at rt for
2 h. The reaction mixture was combined with the reaction mixture of a 100 mg test run, d with
water and extracted twice with ethyl e. The combined organic phases were washed with water
10 and sat. aq. sodium chloride solution, dried over magnesium sulfate and evaporated. Purification by
column chromatography on silica gel (cyclohexane/ethyl acetate 2:1 —> 100% ethyl acetate) afforded
1.36 g (93% of th.) of the title compound.
LC-MS (method 2): R. = 1.13 min; MS (ESIpos): m/z = 357/359 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.98-7.68 (m, 3H), 7.04 (s, 1H), 4.68 (s, 2H), 0.89 (s, 9H),
15 0.09 (s, 6H) ppm.
Intermediate 36A
4-Amino( {[tert-butyl(dimethyl)silyl]oxy}methyl)pyrrolo[2,1 -f] [1 ,2,4]triazinecarb0nitrile
NH2 C|:H3 CH3
N / / O—?i CH3
KN/N / CH CH
3
3
CN
Under argon, a mixture of ediate 35A (880 mg, 2.46 mmol), bis(diphenylphosphino)-
20 fil), bis(dibenzy1ideneacetone)palladium [Pd(dba)2] (135 mg, 0.148 mmol), zinc cyanide (578 mg,cene]dichloropalladium(II)-dichloromethane complex [PdC12(dppf) x DCM] (120 mg, 0.148
4.92 mmol), zinc powder (64 mg, 0.985 mmol) and zinc acetate (180 mg, 0.985 mmol) in degassed
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_85_
DMF/water (100:1, 9.2 ml) was stirred at 160°C overnight. The reaction mixture was then combined
with the reaction mixture of a 100 mg test run, and the combined mixtures were adsorbed on
kieselguhr, filtered over another layer of kieselguhr and eluted with tert—butyl methyl ether. The
filtrate was washed with sat. aq. sodium hydrogencarbonate solution, and the aqueous layer was re-
extracted three times with tert—butyl methyl ether. The combined organic phases were dried over
sodium sulfate and evaporated. ation by column chromatography on silica gel (cyclo-
/ethyl acetate 1:1) afforded 453 mg (44% of th.) of the title nd.
LC—MS (method 2): R: = 1.09 min; MS (ESIpos): m/z = 304 (M+H)+
lH—NMR (400 MHz, DMSO-d6): 8 = 8.22-8.35 (m, 2H), 8.06 (s, 1H), 6.95 (s, 1H), 4.83 (s, 2H),
10 0.91 (s, 9H), 0.11 (s, 6H) ppm.
Intermediate 37A
4-Aminobromo( { [tert—butyl(dimethyl)silyl]oxy}methyl)pyrrolo[2, 1 -f] [1 ,2,4]triazine—7—carbo-
nitrile
”“2 Br ('ng CH3
N / / O—?i CH3
KN/N / CH CH
3
3
ON
15 A solution of 1,3-dibromo-5,5-dimethylhydantoin (621 mg, 2.17 mmol) in THF (20 ml) was added
dropwise to a solution of Intermediate 36A (1.1 g, 3.62 mmol) in THF (80 ml) at —50°C. The
resulting mixture was slowly warmed to rt, stirred for 2 h and then quenched with 10% aq. sodium
lfate solution and sat. aq. sodium hydrogencarbonate solution. The aqueous phase was
extracted three times with ethyl acetate. A solid itating from the ethyl acetate solution was
20 filtered off and washed with ethyl acetate, affording 508 mg (100% purity, 36% of th.) as a first
crop of the title compound. The remaining filtrate was dried over sodium sulfate and evaporated. The
residue was precipitated from DMSO and washed with DMSO and ethyl acetate affording further
498 mg (85% purity, 26% of th.) of the title compound.
LC—MS (method 5): R = 2.70 min; MS (ESIpos): m/z = 382/384 (M+H)+
25 lH-NMR (400 MHz, DMSO-d5): 5 = 8.10 (s, 1H), 4.76 (s, 2H), 0.90 (s, 9H), 0.12 (s, 6H) ppm.
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Intermediate 38A
4—Amino( { [tert—butyl(dimethyl)silyl] oxy} methyl)(7-methoxymethylbenzothiophen—2-yl)-
pyrrolo[2,1 -f] [1 ,2,4]triazinecarbonitrile
Under argon, a solution of Intermediate 37A (459 mg, 1.29 mmol) in degassed THF (14.8 ml) was
added to (2'-aminobiphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenyl—2-yl)-
phosphine (1:1; 152 mg, 0.19 mmol; see S. L. ld et al., J. Am. Chem. Soc. 132 (40), 14073—
14075 (2010)) and Intermediate 6A (647 mg, 1.94 mmol). Degassed 0.5 M aq. potassium phosphate
solution (5.1 ml) was added dropwise, and the resulting mixture was stirred at 60°C for 2 h. The
10 reaction mixture was then combined with the reaction mixtures of us 70 mg, 90 mg and 500
mg test runs and evaporated. Purification of the residue by column chromatography on silica gel
(cyclohexane/ethyl acetate 3:1 —> 100% ethyl acetate) afforded 1.0 g (58% of th.) of the title
compound.
LC—MS d 2): R = 1.49 min; MS (ESIpos): m/z = 480 (M+H)+
15 1H-NMR (400 MHZ, DMSO-ds): 5 = 8.57-8.35 (br. s, 1H), 8.18 (s, 1H), 7.41 (s, 1H), 7.30 (s, 1H),
6.86 (s, 1H), 6.28-6.03 (br. s, 1H), 4.74 (s, 2H), 3.95 (s, 3H), 2.44 (s, 3H), 0.83 (s, 9H), 0.00 (s,
6H) ppm.
Intermediate 39A
oformyl(7-methoxymethyl-1—benzothiophen—2-yl)pyrrolo[2,1 -f] [1 ,2,4]triazine—7-
20 carbonitrile
D
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A solution of Example 68 (250 mg, 0.684 mmol) in dichloromethane (5 ml) was treated with Dess-
Martin periodinane (1,1,1-triacetoxy—1,1-dihydro-1,2-benziodoxol-3(1H)-one; 377 mg, 0.889 mmol)
and stirred at rt for 1 h. The reaction mixture was combined with the reaction mixture from a 50 mg
test run, quenched with sat. aq. sodium hydrogencarbonate solution and sat. aq. sodium lfate
solution (1 :1) and stirred at rt for 30 min. The aqueous phase was extracted three times with ethyl
acetate, and the combined organic phases were dried over sodium sulfate and evaporated.
ation by column chromatography on silica gel (cyclohexane/25% ethyl acetate —> 100% ethyl
acetate) afforded 102 mg (24% of th.) of the title nd.
10 LC—MS (method 2): R1 = 1.02 min; MS (ESIpos): m/z = 364 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 9.86 (s, 1H), 8.78 (br. s, 1H), 8.30 (s, 1H), 7.62 (s, 1H), 7.36
(s, 1H), 6.91 (s, 1H), 6.51 (br. s, 1H), 3.97 (s, 3H), 2.46 (s, 3H) ppm.
Intermediate 40A
4—Amino—6-(azidomethyl)(7-methoxy-5—methyl— 1 —benzothiophen—2-yl)pyrrolo[2, 1 -f] [1 ,2,4]—
15 triazinecarbonitrile
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_88_
A solution of Example 68 (100 mg, 273 umol) in dichloromethane (5 ml) was d with thionyl
chloride (39 pl, 547 umol) and stirred at rt for 15 min. After evaporation, the e was dissolved
in DMF (6 ml) and treated with sodium iodide (205 mg, 1.36 mmol) and sodium azide (355 mg, 5.47
. The mixture was stirred at 80°C overnight, then diluted with water and extracted three times
with ethyl acetate. The combined organic layers were washed with water, followed by sat. aq.
sodium chloride solution, dried over sodium sulfate and evaporated affording 91 mg of the crude
product which was used in the next step t further purification.
LC—MS (method 2): R = 1.13 min; MS (ESIpos): m/z = 391 (M+H)+
1H-NMR (400 MHz, DMSO-ds): d = 8.65—8.45 (br. s, 1H), 8.23 (s, 1H), 7.46 (s, 1H), 7.34 (s, 1H),
10 6.88 (s, 1H), 6.41-6.10 (br. s, 1H), 4.57 (s, 2H), 3.96 (s, 3H), 2.46 (s, 3H) ppm.
Intermediate 41A
5,7-Dibromo( { [tert—butyl(dimethyl)silyl]oxy}methyl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amine
NH2 Br
N/ /
K /N CH
/ O—?i—€CH3I
3 CH3
N
Br CH3 CH3
A on of Intermediate 18A (2 g, 6.21 mrnol) in DMF (20 ml) was treated with imidazole
15 (846 mg, 12.4 mmol) and tert—butyldimethylsilyl chloride (1.12 g, 7.45 mmol) and stirred at rt for
20 h. The reaction mixture was then diluted with water (200 ml) and stirred at rt for fithher 2 h.
tion of the solid ed 2.46 g (88% of th.) of the title compound.
LC-MS (method 2): R = 1.37 min; MS (ESIpos): m/z = 437 (M+H)+
1H-NMR (400 MHz, DMSO-da): 5 = 8.49—8.05 (br. s, 1H), 7.96 (s, 1H), 7.15-6.76 (br. s, 1H), 4.64
20 (s, 2H), 0.87 (s, 9H), 0.09 (s, 6H) ppm.
Intermediate 42A
2—[4—Aminobromo( { [tert—butyl(dimethyl)silyl]oxy}methyl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—7—yl] -
propan—2-ol
D
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_89_
CH3
Under argon, a solution of Intermediate 41A (1 g, 2.29 mmol) in THF (40 ml) was cooled to —78°C
and treated with a 1.6 M solution of methyllithiurn in diethylether (1.5 ml, 2.40 mmol). After stirring
for 10 min at -78°C, a 1.6 M solution of n-butyllithium in hexanes (1.58 ml, 2.52 mmol) was added,
and stirring was continued for 10 min. Acetone (1.68 ml, 22.92 mmol) was added, and the resulting
mixture was slowly warmed to rt and stirred at rt for 18 h. The reaction was then quenched with
water, and the aqueous phase was ted twice with ethyl acetate. The combined organic phases
were washed with sat. aq. sodium chloride solution, dried over magnesium sulfate and ated.
Purification by flash chromatography on silica gel (cyclohexane/ethyl acetate 2:1) afforded 306 mg
10 (30% of th.) of the title compound.
LC-MS d 4): R = 1.39 min; MS (ESIpos): m/z = 415/417 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 5 = .85 (br. s, 1H), 7.89 (s, 1H), 7.05-6.82 (br. s, 1H), 5.49
(s, 1H), 4.88 (s, 2H), 1.66 (s, 6H), 0.87 (s, 9H), 0.08 (s, 6H) ppm.
Intermediate 43A
15 2—[4-Aminobromo(hydroxymethyl)pyrrolo[2, l -f] [l ,2,4]triazin—7-yl]propan—2-ol
A solution of Intermediate 42A (304 mg, 0.732 mmol) in THF (15 ml) was treated with a l M
solution of tetra-n-butylammonium fluoride in THF (768 pl, 768 umol) and stirred at rt for 2 min.
The reaction mixture was diluted with itrile (20 ml), then evaporated, and the residue was
20 Died by preparative RP-HPLC (Reprosil C18, nt 10-30% acetonitrile/0.2% aq. TFA). The
product thus obtained was dissolved in methanol and filtered through an anion exchange cartridge
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(Stratospheres SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate
was ated affording 180 mg (67% of th.) of the title compound.
LC-MS (method 2): R = 0.55 min; MS (ESIpos): m/z = 301/303 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.21-7.90 (m, 1H), 7.87 (s, 1H), 7.09-6.60 (br. s, 1H), 5.90
(br. s, 1H), 5.03 (br. s, 1H), 4.63 (s, 2H), 1.66 (s, 6H) ppm.
ediate 44A
4-Amino(2-hydroxypropanyl)(7-methoxymethy1benzothiophenyl)pyrrolo[2, 1 -f] -
[1 ,2,4]t1iazinecarbaldehyde
10 A solution of Example 73 (135 mg, purity 89%, 302 umol) in dichloromethane (7 ml) was treated
with Dess-Martin inane -triacetoxy-1,1-dihydro-1,2-benziodoxol-3(1H)-one; 166 mg,
392 umol) and stirred at rt for 70 min. The reaction mixture was combined with the reaction mixture
of a 18 mg (45 umol) test run and quenched with sat. aq. sodium hydrogencarbonate solution and
sat. aq. sodium thiosulfate solution (1:1). The aqueous phase was extracted three times with
15 dichloromethane. The combined c phases were washed with sat. aq. sodium chloride solution,
dried over magnesium sulfate and evaporated yielding 143 mg (purity 77%, 92% of th.) of the title
compound.
LC-MS (method 2): R = 1.08 min; MS (ESIpos): m/z = 397 (M+H)+.
Intermediate 45A
20 D[tert-Butyl(dimethyl)silyl] oxy} methyl)pyrrolo[2, 1 -f] [1 ,2,4]triazinamine
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NH? (EH3 CH3
N/ / 0—?i+CH3
K /N / CH3 CH
3
N
A solution of 1.5 g (9.14 mmol) of Intermediate 8A in 15 ml dry DMF was treated with 1.65 g
(10.96 mmol) tert—butyldimethylsilyl chloride and 1.24 g (18.27 mmol) imidazole and stirred at rt
overnight. The reaction mixture was poured into 250 ml water and stirred for 5 min. The resulting
precipitate was filtered off and dried in vacuo at 45°C. Yield: 2.28 g (90% of th.).
LC—MS (method 5): R1 = 2.12 min; MS s): m/z = 279 (M+H)+.
Intermediate 46A
6-( { [tert—Butyl(dimethyl)silyl]oxy}methyl)-7—chloropyrrolo[2, 1 -f] [1 ,2,4]triazin—4-amine
NHz ('le CH3
K /N / CH CH
3
N
Cl
10 A solution of 2 g (7.18 mmol) of Intermediate 45A in 20 ml THF was treated with 893 mg (6.47
mmol) rosuccinimide in 6 portions over 60 min at -10°C. Stirring was continued for 15 min at
—10°C, then the mixture was allowed to warm to rt. Another 192 mg (1.44 mrnol) N—chloro-
imide were added at rt, and stirring was continued overnight. About nth of the reaction
mixture was evaporated to dryness, and the residue was purified by preparative RP-HPLC (Reprosil
15 C18, nt 10-95% acetonitrile/0.1% aq. formic acid) furnishing 94 mg (4% of th.) of the title
compound. The major part of the reaction mixture was adsorbed on silica gel and subjected to
chromatography on silica gel with isohexane/ethyl acetate 5-66% as eluent, yielding 899 mg (40% of
th.) of the title compound. Total yield: 993 mg (44% of th.).
LC-MS (method 5): R1 = 2.45 min; MS (ESIpos): m/z = 313 (M+H)+
20 1H—NMR (400 MHz, DMSO-ds): 8 = 7.69—8.04 (m, 3H), 7.0 (s, 1H), 4.70 (s, 2H), 0.88 (s, 9H),
0.08 (s, 6H) ppm.
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_92_
Intermediate 47A
o( { [tert—butyl(dimethyl)silyl] oxy} methyl)chloropyrrolo[2, 1 -f] [1 ,2,4]triazin—4—amine
““2 Br €st CH3
K /N / CH3 H
3
N
Cl
A solution of 890 mg (2.85 mmol) of Intermediate 46A in 20 ml DMF was treated with 506 mg
(2.85 mmol) N—bromosuccinimide in portions over 1 h at -10°C. Stirring was ued for 3 h at
—10°C and then overnight at rt. Water (200 ml) was added, and the mixture was stirred for 2 h. The
precipitated solid was filtered off, washed with water and dried in vacuo at 45°C. Yield: 997 mg
(89% of th.).
LC—MS (method 5): R = 2.82 min; MS (ESIpos): m/z = 391/393/395 (M+H)+
10 1H-NMR (400 MHz, DMSO-ds): 6 = 8.32 (br. s, 1H), 7.97 (s, 1H), 6.97 (br. s, 1H), 4.66 (s, 2H),
0.87 (s, 9H), 0.09 (s, 6H) ppm.
Intermediate 48A
6—( { [tert—Butyl(dimethyl)silyl]oxy}methyl)-7—chloro(7-methoxymethylbenzothiophen—2-yl)-
pyrrolo[2,1-f] [1,2,4]triazin—4-amine
15
Under an argon atmosphere, a flask was d with 800 mg (2.04 mmol) of Intermediate 47A,
Dmg (2.04 mmol) of Intermediate 6A, 80 mg (0.1 mmol) (2'-aminobiphenylyl)(chloro)-
palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine (1:1; see S. L. Buchwald er al.,
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_93_
J. Am. Chem. Soc. 132 (40), 14073-14075 ) and 1.3 g (6.13 mmol) potassium phosphate.
Then, 30 ml of a degassed 1,4-dioxane/water mixture (5:1) were added, and the solution was stirred
at 70°C for l h. Further 680 mg (2.04 mmol) of Intermediate 6A and 32 mg (0.04 mmol) (2'—amino-
biphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine (1:1) were
added, and stirring at 70°C was continued for another 1 h. This procedure was repeated three times
until the ng material was consumed (control by . With the last n of reagents, also
1.6 ml of 5 M aq. sodium ide solution were added to achieve a pH value of 8-9. At the end of
the reaction period, 30 ml water and 5 M aq. formic acid were added (pH 3-4) whereupon an oil
separated. A part of this oil was purified by preparative RP-HPLC (Reprosil C18, gradient 10-95%
10 acetonitrile/0.1% aq. formic acid). Two fractions of the title compound were obtained: 103 mg of a
solid (89% purity by LC-MS, 9% of th.), and 23 mg of a solid (100% purity by LC-MS, 2% of th.).
The rest of the oil and the supernatant were diluted with water, adjusted to pH 8-9 with sat. aq.
sodium hydrogencarbonate solution and extracted three times with dichloromethane. The combined
organic phases were washed with water, dried and evaporated under reduced re, yielding 2.1 g
15 of an oil. This material was purified by column chromatography on silica gel with
dichloromethane/0-5% methanol as eluent to afford further 709 mg (43% purity by LC—MS, 31% of
th.) of the title nd. Total yield: 42% of th.
LC—MS (method 2): R: = 1.57 min; MS (ESIpos): m/z = 489 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 5 = 8.08 (s, 1H), 7.43 (s, 1H), 7.32 (s, 1H), 6.88 (s, 1H), 4.66 (s,
20 2H), 3.98 (s, 3H), 2.47 (s, 3H), 0.84 (s, 9H), —0.03 (s, 6H) ppm.
Intermediate 49A
4—Aminochloro(7-methoxymethy1—1 —benzothiophen—2-yl)pyrrolo[2, l -f] [ l ,2,4]triazine—6—
carbaldehyde
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_94_
To a suspension of 166 mg (0.44 mmol) of Example 79 and molecular sieves (3A) in 3 ml dichloro-
methane were added 207 mg (0.49 mmol) Dess-Martin periodinane (1,1,l-triacetoxy-l,l-dihydro-
1,2-benziodoxol-3(1H)-one) at 0-5°C. The mixture was stirred for 10 min at this temperature, then
fithher 56 mg (0.13 mmol) Dess-Martin periodinane were added, and stirring was ued for 15
min at 5°C and 10 min at ambient temperature. After this, the e was adsorbed on
diatomaceous earth and purified by column tography on silica gel with dichloromethane/
0—10% ol as eluent. Yield: 100 mg of a solid (92.7% pure by LC-MS, 56% of th.).
LC-MS (method 2): R = 1.08 min; MS (ESIpos): m/z = 373 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 8 = 9.90 (s, 1H), 8.46 (br. s, 1H), 8.15 (s, 1H), 7.54 (s, 1H), 7.34
10 (s, 1H), 6.89 (s, 1H), 6.07 (br. s, 1H), 3.96 (s, 3H), 2.46 (s, 3H) ppm.
Intermediate 50A
7-Chloro(chloromethyl)(7-methoxymethylbenzothiophen—2-yl)pyrrolo[2, 1 -f] [1,2,4]-
triazin—4-amine
15 The title compound was isolated as a by-product in the preparation of Example 79 (see below).
Yield: 9.2 mg (10% ofth.).
LC-MS (method 3): R. = 2.98 min; MS (ESIpos): m/z = 393/395 .
Intermediate 51A
6—( { [tert—Butyl(dimethyl)silyl] oxy}methyl)—7—methylpyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amine
D
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_95_
NH2 CIZH3 CH3
N/ / O—?i CH3
K ,N / C“3 CH
3
N
CH
3
To a solution of 3 g (8.4 mmol) of Intermediate 35A in 60 ml 1,4-dioxane under an argon atmo-
sphere were added 171 mg (0.21 mmol) of PdC12(dppf) x DCM and then dropwise over 10 min
16.8 ml of a 2 M solution of dimethylzinc in toluene (causing a rise in temperature from 22°C to
31°C). Stirring was continued first for 10 min at ambient temperature, then for 13 h at 90°C. After
this, water (10 ml) was added to the reaction mixture at rt, and the suspension was stirred for l h.
The mixture was evaporated under reduced pressure, and the residue was taken up in water and ethyl
acetate and stirred for another 1 h. The precipitate was d off and discarded, the phases were
separated, and the aqueous layer was extracted twice with ethyl acetate. The combined organic
10 phases were dried and evaporated affording 2.45 g (92% purity by LC-MS, 92% of th.) of the title
compound.
LC-MS d 5): R = 2.18 min; MS (ESIpos): m/z = 293 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 8 = 7.98—7.78 (m, 3H), 7.04 (s, 1H), 4.68 (s, 2H), 0.89 (s, 9H),
0.09 (s, 6H) ppm.
15 Intermediate 52A
(4-Aminomethylpyrrolo[2,1 -f] [1 ,2,4]triazin—6-yl)methanol
NH2
OH
N / /
R N /
N/
Method I.‘
To a solution of 100 mg (0.28 mmol) of Intermediate 35A in 2 ml 1,4-dioxane under an argon
20 atmosphere were added 6 mg (0.01 rnmol) PdC12(dppf) x DCM and then se over 10 min
0.56 ml of a 2 M solution of ylzinc in toluene. The mixture was stirred at 90°C overnight,
D evaporated, and the residue was treated with acetonitrile and 5 M aq. formic acid. The pre-
cipitate was d off, the filtrate was evaporated, and the residue was taken up in DMSOXaceto-
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_96_
nitrile and d by preparative C (Reprosil C18, gradient 10-95% acetonitrile/0.1% aq.
formic acid). Yield: 33 mg (66% of th.).
1H-NMR (400 MHz, DMSO-ds): 8 = 7.79 (s, 1H), 7.47 (br. s, 2H), 6.80 (s, 1H), 4.84 (t, 1H), 4.49
(d, 2H), 2.36 (s, 3H) ppm.
Method 2.‘
Under an argon atmosphere, a microwave reaction vessel was charged with 750 mg (3.1 mmol) of
Intermediate 34A, 515 pl (3.7 mmol) trimethylboroxine, 786 mg (3.7 mmol) potassium phosphate
and 73 mg (0.09 mmol) (2'-aminobiphenylyl)(chloro)palladium-dicyclohexyl(2',4',6'-triisopropyl-
biphenylyl)phosphine (1:1; see S. L. Buchwald et al., J. Am. Chem. Soc. 132 (40), 14075
10 (2010)). Then, 13 ml of a degassed 1,4—dioxane/water mixture (5:1) were added, the vessel was
sealed, and the mixture was heated to 140°C for 20 min in the microwave (4 bar, 50 watt). Further
50 mg (2'-aminobiphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)-
phosphine (1:1) were added, and the mixture was heated again to 140°C for 20 min in the
microwave. Another portion of 515 pl hylboroxine was added, and the vessel was heated again
15 to 140°C for 20 min. The latter procedure was repeated two more times with heating s of 30
min each until LC-MS showed only minor amounts of starting material left. The mixture was filtered
over guhr, washed with 1,4-dioxane, and the combined filtrates were evaporated to dryness.
This e was combined with a previous 100 mg test run and purified by preparative RP—HPLC
(XBridge C18, gradient 5-42% acetonitrile/0.05% aq. ammonium hydroxide solution). Yield: 238
20 mg (38% ofth.).
LC-MS (method 5): R = 0.51 min; MS (ESIneg): m/z = 177 (M-H)’
lH—NMR (400 MHz, DMSO-ds): 5 = 7.79 (s, 1H), 7.48 (br. s, 2H), 6.80 (s, 1H), 4.84 (t, 1H), 4.49
(d, 2H), 2.36 (s, 3H) ppm.
Intermediate 53A
25 nobromomethylpyrrolo [2, 1 -f] [l ,2,4]triazin—6-yl)methanol
NH2 Br
OH
N/ /
K N /
N/
D CH3
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A solution of 245 mg (1.38 mmol) of Intermediate 52A in 8.8 ml DMF was treated with 288 mg
(1.62 mmol) osuccinimide in portions over 2 h at -10°C. Stirring was continued at —10°C for
30 min and then for 2 h at ambient temperature. The mixture was poured into 50 ml water and
extracted with ethyl acetate. The combined organic phases were dried and evaporated. The residue
was flash-chromatographed on silica gel with dichloromethane/0-15% methanol as eluent. Yield: 148
mg (42% of th.).
LC—MS (method 4): R. = 0.42 min; MS (ESIpos): m/z = 257/259 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.85 (s, 1H), 6.14-8.22 (broad, 2H), 4.88 (t, 1H), 4.45 (d,
2H), 2.43 (s, 3H) ppm.
10 Intermediate 54A
4-Amino(7-methoxy—5-methylbenzothiophen—2-yl)methylpyrrolo[2, 1 -f] [1 ,2,4]triazine—6-
carbaldehyde
To a suspension of 175 mg (0.49 mmol) of Example 75 and molecular sieves (3A) in 3.5 m1
15 dichloromethane were added 230 mg (0.54 mmol) Dess-Martin inane (1,1,1—triacetoxy—1,1-
dihydro-l,2-benziodoxol-3(1H)-one) at 0—5°C. The e was d for 5 min at this temperature,
followed by 30 min at rt. After this, the mixture was adsorbed on diatomaceous earth and purified by
flash-chromatography on silica gel with isohexane/10-100% ethyl acetate as . Yield: 139 mg of
a solid (79% of th.).
20 LC—MS (method 5): R. = 2.34 min; MS (ESIpos): m/z = 353 (M+H)+
fivMR (400 MHz, DMSO-ds): 8 = 9.93 (s, 1H), 8.06 (s, 1H), 7.50 (s, 1H), 7.33 (s, 1H), 6.88 (s, 3.96 (s, 3H), 2.71
, (s, 3H), 2.46 (s, 3H) ppm.
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_98_
ediate 55A
tert—Butyl 4-[(4-arninomethylpyrrolo[2, 1 —f] [1 ,2,4]triazin—7-yl)methyl]piperazinecarboxylate
A solution of ylpyrrolo[2,1-fj[1,2,4]triazin—4-arnine (500 mg, 3.3 mmol; ation
described in PCT Int. Pat. Appl. WO 2007/056170) in acetic acid (8 ml) was treated with 37% aq.
formaldehyde solution (328 pl, 4.04 rnrnol) and tert—butyl piperazine-l-carboxylate (754 mg, 4.04
mmol). The mixture was stirred at 60°C overnight. After evaporation, the residue was taken up in
ethyl acetate and washed with sat. aq. sodium hydrogencarbonate solution. The aqueous layer was
extracted twice with ethyl acetate. The combined organic phases were dried over magnesium sulfate
10 and evaporated affording 1.2 g of the crude product which was used in the next step without fiirther
ation.
LC—MS (method 2): R. = 0.56 min; MS (ESIpos): m/z = 347 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.79 (s, 1H), 7.51 (br. s, 2H), 6.67 (s, 1H), 3.76 (br. s, 2H),
3.29—3.17 (m, 4H), 2.36-2.29 (m, 4H), 2.22 (s, 3H), 1.37 (s, 9H) ppm.
15 Intermediate 56A
utyl 4- [(4-arninobromomethylpyrrolo [2, 1 -f] [1 ,2,4]triazin—7-yl)methyl]piperazine— 1 —
carboxylate
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_99_
NH2 Br
N / /
kw / CH3
N/\\N o
\\/ \/( CH3
0new.
CH3
A solution of Intermediate 55A (1.17 g, 3.37 mmol) in THF (20 ml) was cooled to -60°C and treated
with 1,3-dibromo-5,5-dimethylhydantoin (5.78 mg, 2.02 mmol). The mixture was stirred for 4 h at
—60°C to -20°C. After this, the reaction mixture was quenched with 10% aq. sodium thiosulfate
solution. Most of the THF solvent was evaporated whereupon a solid precipitated. Filtration and
recrystallization from acetone afforded 862 mg (59% of th.) of the title compound.
LC—MS (method 2): R. = 0.66 min; MS (ESIpos): m/z = 425/427 (M+H)+
lH-NMR (400 MHz, DMSO-ds): 5 = 8.29—7.62 (br. s, 1H), 7.85 (s, 1H), .44 (br. s, 1H), 3.80
(s, 2H), .22 (m, 4H), 2.37-2.27 (m, 4H), 2.16 (s, 3H), 1.37 (s, 9H) ppm.
10 Intermediate 57A
tert—Butyl 4- {[4-amino(7-methoxymethyl—1 -benzothiophen—2-yl)methylpyrrolo [2, 1 —f] [1 ,2,4] -
triazin—7-yl]methyl }piperazinecarboxylate
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—100—
A solution of Intermediate 56A (100 mg, 235 umol) in degassed 1,4-dioxane (3 ml) was treated with
Intermediate 6A (93 mg, 282 umol), dicyclohexyl(2',6'-dimethoxybiphenylyl)phosphine (S—Phos;
9.6 mg, 23 umol) and palladium diacetate (2.6 mg, 11 umol). Degassed 3 M aq. potassium
phosphate solution (588 ul) was added, and the resulting mixture was stirred at 60°C for 1 h. A
further portion of Intermediate 6A (78 mg, 235 umol) was added, and stirring at 60°C was continued
overnight. The reaction mixture was quenched with 2 M aq. sodium hydroxide solution, and the
aqueous phase was extracted with ethyl acetate. The combined organic phases were washed with sat.
aq. sodium chloride solution, dried over ium sulfate and evaporated. Purification by column
chromatography on silica gel (cyclohexane/ethyl acetate 3:2) afforded 82 mg (62% of th.) of the title
10 nd.
LC-MS (method 2): R = 0.97 min; MS (ESIpos): m/z = 523 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.94 (s, 1H), 7.34 (s, 1H), 7.30 (s, 1H), 6.84 (s, 1H), 3.95 (s,
3H), 3.84 (s, 2H), 3.30-3.23 (m, 4H, p with water peak), 2.45 (s, 3H), 2.42-2.33 (m, 4H),
2.19 (s, 3H), 1.39 (s, 9H) ppm.
15 Intermediate 58A
tert—Butyl 4-[(4-aminochloropyrrolo[2,1—f][1,2,4]triazin—7-yl)methyl]piperazine—1—carboxylate
Following the procedure of ediate 55A, 4 g (23.7 mmol) 6-chloropyrrolo[2,1—f][1,2,4]triazin—
4-amine (preparation described in PCT Int. Pat. Appl. WO 2007/064883) were reacted to give 11.2
20 g of the title compound as crude material which was used in the next step without further
ation.
LC—MS (method 5): R = 0.74 min; MS (ESIpos): m/z = 367 (M+H)+
fimple of 67 mg of the corresponding formiate salt, tert—butyl aminochloropyrrolo[2,1—f]—4]triazinyl)methyl]piperazinecarboxylate formiate, was isolated after preparative RP-
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—101—
HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) of 100 mg of the crude
material obtained above.
1H-NMR (400 MHz, DMSO-ds): inter al. 8 = 8.14 (s, 1H), 7.91 (s, 1H), 7.83 (br. s, 2H), 6.95 (s,
1H), 3.80 (s, 2H), 3.17 (s, 2H), 2.38 (br. s, 4H), 1.37 (s, 9H) ppm.
Intermediate 59A
utyl 4- [(4-aminobromochloropyrrolo[2, 1 —f] [1 riazin—7-yl)methyl]piperazine— 1 —
ylate
NH2 Br
N/ /
K Cl
N /
N/
Following the procedure of Intermediate 56A, 11 g (30 mmol) of Intermediate 58A were reacted to
10 give 1.17 g (9% of th.) of the title nd after flash-chromatography on silica gel (dichloro-
methane/methanol 10:1) and subsequent ative RP-HPLC (Daiso C18, gradient 40—65% aceto-
nitrile/water).
LC-MS (method 2): R = 0.74 min; MS (ESIpos): m/z = 445/447/449 (M+H)+
1H—NMR (400 MHz, DMSO-ds): inter al. 8 = 7.96 (s, 1H), 3.84 (s, 2H), 2.37 (br. s, 4H), 1.37 (s,
15 9H) ppm.
Intermediate 60A
tert—Butyl 4- {[4-aminochloro(7-methoxy—5—methylbenzothiophen—2-yl)pyrrolo[2, l —f] [l ,2,4] -
triazin—7-yl]methyl }piperazinecarboxylate
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—102—
Under an argon atmosphere, a flask was charged with 140 mg (0.31 mmol) of Intermediate 59A,
102 mg (0.46 mmol) of Intermediate 5A, 16 mg (0.02 mmol) PdC12(dppf) X DCM and 122 mg (1.15
mmol) sodium carbonate. After addition of 3 ml degassed l,2-dimethoxyethane/water (3:1), the
suspension was stirred at 60°C for 2.5 h. Further portions of Intermediate 5A (50 mg, 0.23 mmol)
and PdC12(dppf) X DCM (8 mg, 0.01 mmol) were added, and stirring was continued at 40°C for
2.5 h. The latter procedure was repeated once more until the starting material was consumed. Then,
the reaction e was partially evaporated under reduced re, water was added, and the
mixture was extracted with dichloromethane. The combined organic phases were washed with water
10 and sat. aq. sodium chloride solution, dried and evaporated under reduced pressure. The residue (322
mg) was purified by preparative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.l% aq.
formic acid) to give 49 mg of a mixture of the title compound and the Boc-deprotected derivative, 6-
chloro(7-methoxymethylbenzothiophen—2-yl)(piperazin— l -ylmethyl)pyrrolo [2, 1 —
f][1,2,4]triazin—4-amine. This mixture was used as such in the next reaction step (see e 85).
15 LC-MS (method 2): R = 1.00 min; MS (ESIpos): m/z = 543 (M+H)+, and R = 0.81 min; MS (ESI-
pos): m/z = 443 .
Intermediate 61A
4- {[4-Amino(methoxymethyl)pyrrolo[2,1-f] [l ,2,4]triazin—7-yl]methyl}piperazin—2-one
D
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—103—
NH2
N / / O—CH3
KN» /
A solution of Intermediate 10A (5 g, 28.1 mmol) and piperazin-Z-one (3.09 g, 30.9 mmol) in acetic
acid (85 ml) was treated with 37% aq. formaldehyde solution (3.15 ml, 42.1 mmol) and d at
60°C for 16 h. The les were evaporated under reduced pressure, and the residue was dissolved
in methanol and adsorbed on diatomaceous earth. Purification by column chromatography on silica
gel (5-10% methanol/dichloromethane) afforded 3.91 g (46% of th.) of the title compound.
LC-MS (method 3): R = 1.68 min; MS (ESIpos): m/z = 291 (M+H)+.
Intermediate 62A
4- {[4-Aminobromo(methoxymethyl)pyrrolo[2,1-f] [1 ,2,4]triazinyl]methyl}piperazin-Z-one
NH2 Br
N / / ()_CH3
KN» /
10
A solution of Intermediate 61A (3.9 g, 13.4 mmol) in DMF (50 ml) was cooled to 0°C and d
with a solution of N—bromosuccinimide (2.63 g, 14.8 mmol) in DMF (6 ml). The mixture was stirred
at 0°C for 1 h. Then, the solvent was evaporated, and the residue was dissolved in methanol and
ed on aceous earth. Purification by column chromatography on silica gel (5-10%
15 methanol/dichloromethane) afforded 1.99 g (39% of th.) of the title compound.
LC—MS (method 3): R. = 1.86 min; MS (ESIpos): m/z = 369/371 (M+H)+
D
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—104—
1H-NMR (400 MHZ, DMSO-ds): 8 = 7.96-8.23 (br. s, 1H), 7.90 (s, 1H), 7.71 (s, 1H), .98
(br. s, 1H), 4.45 (s, 2H), 3.91 (s, 2H), 3.27 (s, 3H), 3.07 (br. s, 2H), 2.96 (s, 2H), 2.56 (br. s, 2H)
Intermediate 63A
7—(Chloromethyl)(ethoxymethyl)(7-methoxymethylbenzothiophen—2-yl)pyrrolo[2, l -f] -
[1 ,2,4]triazin—4-amine hydrochloride
A suspension of Example 86 (1 g, 2.51 mmol) in toluene (60 ml) was treated dropwise with l
chloride (1.83 ml, 25.1 mmol), and the mixture was stirred at rt overnight. The volatiles were evapo-
10 rated under d pressure. The residue was co-evaporated with toluene under d pressure
for three times affording 0.85 g (74% of th.) of the title compound which was ately used for
the next step without further purification.
Intermediate 64A
4-Amino(ethoxymethyl)(7-methoxymethylbenzothiophenyl)pyrrolo [2, 1 -f] [1 ,2,4]-
15 triazinecarboxylic acid
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—105—
A suspension of Intermediate 17A (5 g, 12.6 mmol) in THF/water (10:1, 220 ml) was treated with a
2 M solution of 2-methylbutene in THF (31.5 ml, 63.1 mmol) and with sodium dihydrogen—
phosphate (6.96 g, 50.4 mmol). The e was stirred at rt for 5 min. Then, sodium chlorite (4.56
g, 50.44 mmol) was added, and the resulting mixture was stirred at rt for 20 h. The suspension was
filtered, and the resulting solid was washed with water affording 4.24 g (74% of th.) of the title
compound which was used in the next step without further purification.
LC-MS (method 4): R = 1.06 min; MS (ESIpos): m/z = 413 (M+H)+
1H—NMR (400 MHz, DMSO-da): 5 = 13.22 (br. s, 1H), 8.53-8.00 (br. s, 1H), 8.14 (s, 1H), 7.41 (s,
10 1H), 7.33 (s, 1H), 6.86 (s, 1H), 6.28-5.65 (br. s, 1H), 4.61 (s, 2H), 3.96 (s, 3H), 3.36 (q, 2H), 2.46
(s, 3H), 1.01 (t, 3H) ppm.
Intermediate 65A
5,7—Dimethoxy- l -benzothiophene
15 To a solution of othiophene-5,7-diol (1.16 g, 6.98 mmol) in acetone (20 ml) under argon were
added ium carbonate (2.89 g, 20.9 mmol) and iodomethane (912 pl, 14.6 mmol). The resulting
mixture was d under reflux for 18 h. After cooling to rt, the mixture was treated with a 7 M
Dtion of ammonia in methanol (10 ml) for 30 min and then adsorbed on silica gel. Purification by
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—106—
column chromatography over silica gel (cyclohexane/ethyl acetate 40:1) afforded 0.52 g (32% of th.)
of the title compound.
LC-MS (method 4): R1 = 1.02 min; MS (ESIpos): m/z = 195 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.69 (d, 1H), 7.35 (d, 1H), 7.02 (d, 1H), 6.57 (d, 1H), 3.92 (s,
3H), 3.81 (s, 3H) ppm.
Intermediate 66A
(5,7-Dimethoxybenzothiophenyl)boronic acid
HO O\
\ CH
B / 3
/
HO 8
0\
CH3
Under an argon here, a 1.6 M solution of n—butyllithium in hexane (1.84 ml, 2.95 mmol) was
10 added dropwise to a on of Intermediate 65A (520 mg, 2.68 mmol) in dry THF (5 ml) at -70°C.
After 1 h at -70°C, triisopropyl borate (742 pl, 3.21 mmol) was added, and the mixture was stirred
for 16 h while slowly warming up to rt. Dichloromethane and sat. aq. ammonium chloride solution
were added, and the pH value was adjusted to 6 by addition of 1 M hydrochloric acid. The organic
phase was separated, and the aqueous phase was extracted with dichloromethane. The ed
15 organic phases were dried with magnesium sulfate, d and evaporated. The resulting residue
was purified by column chromatography over silica gel (at first eluting with dichloro-
methane/methanol 40:1, then ol, finally methanol/4 M hydrogen chloride in 1,4-dioxane 10:1)
yielding 631 mg (71% purity, 71% of th.) of the title compound.
LC—MS (method 4): R: = 0.83 min; MS (ESIpos): m/z = 239 (M+H)+.
20 Intermediate 67A
4-Amino(chloromethyl)pyrrolo[2,1 -f] [1 ,2,4]triazinecarbaldehyde
D
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—107—
Intermediate 67A was isolated as a side-product of the synthesis of Intermediate 11A after column
tography on silica gel (dichloromethane/acetone 8:2 —) 7:3).
LC—MS (method 2): R = 0.6 min; MS (ESIpos): m/z = 211/213 (M+H)+.
Intermediate 68A
4-Amino [(3 -oxopiperazin—1-yl)methyl]pyrrolo[2,1-f][1,2,4]triazinecarbaldehyde
A solution of Intermediate 67A (11.03 g, 52.4 mmol) and iperazine (6.82 g, 68.1 nnnol) in
331 ml DMF was treated at rt with DIPEA (13.7 ml, 78.6 mmol) and stirred ovemight. The
10 precipitate was filtered off, washed with DMF and diethylether and then dried in vacuo to yield
11.64 g of the title compound (89% purity, 72% of th.).
LC-MS d 7): R = 1.30 min; MS (ESIpos): m/z = 275 (M+H)+.
Intermediate 69A
4- {[4-Amino(hydroxymethyl)pyrrolo[2,1-f] [1 ,2,4]triazin—6-yl]methyl}piperazin—2-one
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—108—
H
N
NH2 <foN
N/ /
h N
N/
OH
To a solution of Intermediate 68A (10.17 g, 89% purity, 33.01 mmol) in 1 M hydrochloric acid (370
ml) and methanol (370 ml) at rt was added zinc dust (12.1 g, 185 mmol), and the mixture was stirred
at rt for 18 h. Silica gel (100 g) was added, and the volatiles were ated under reduced
pressure. The residue was suspended in methanol, the volatiles were evaporated under reduced
pressure again, and the residue was dried in vacuo. The solid was subjected to column chromato-
graphy on silica gel (gradient dichloromethane/7 M ammonia in methanol 10:1 —> 3:1) to yield
6.39 g of the title compound (60% of th.).
LC—MS d 8): R1 = 1.12 min; MS (ESIpos): m/z = 277 (M+H)+
10 1H-NMR (400 MHz, DMSO-ds): 6 = 7.83 (s, 1H), 7.76 (br. s, 1H), 7.64 (br. s, 2H), 6.83 (s, 1H),
5.01 (br. s, 1H), 4.74 (s, 2H), 3.64 (br. s, 2H), 3.14 (br. s, 2H), 2.95 (br. s, 2H), 2.58 (br. s, 2H)
ediate 70A
4- { [4-Aminobromo(hydroxymethyl)pyrrolo[2, 1 -f] [1 ,2,4]triazin—6-yl]methyl}piperazinone
15 trifluoroacetate
H
N
NH2 Br < _)=O
N
N / /
KN/N x CF3COOH
OH
A suspension of Intermediate 69A (1 g) in methanol/water (10:1, 33 ml) was treated with trifluoro-
acetic acid (0.56 ml, 7.24 mmol) to result in a clear solution. A solution of N—bromosuccinimide
(708 mg, 3.98 mmol) in methanol (30 ml) was added se at 0°C, and the mixture was stirred at
20 Dfor 1 h. The formed precipitate was filtered off and dried in vacuo to yield 700 mg of the title
compound (41% of th.).
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LC-MS d 7): R = 1.38 min; MS (ESIpos): m/z = 355/357 (M+H)+
1H-NMR (400 MHZ, D20): 8 = 7.90 (s, 1H), 5.00 (s, 2H), 4.44 (s, 2H), 3.85 (s, 2H), 3.58 (br. t,
2H), 3.50 (br. t, 2H) ppm.
5 Preparation es:
Example 1
4- {[4-Amino(methoxymethyl)-5—(7—methoxy—5—methyl- l -benzothiophenyl)pyrrolo[2,1 —f]—
[l ,2,4]triazin—7-yl]methyl}piperazin—2-one
10 Method 1 .'
A solution of Intermediate 13A (3 g, 7.84 mmol) in methanol (87 ml) was treated with acetic acid
(0.898 ml, 15.68 mmol), 2-oxopiperazine (1.17 g, 11.76 mmol) and sodium triacetoxyborohydride
(4.98 g, 23.53 mmol). The mixture was d at It for 4.5 h. Further portions of 2—oxopiperazine
(392 mg, 3.9 mmol) and sodium triacetoxyborohydride (3.3 g, 15.68 mmol) were added, and the
15 resulting mixture was stirred at 60°C overnight. After evaporation, the e was taken up in sat.
aq. sodium hydrogencarbonate solution and extracted with ethyl acetate. The combined c
phases were dried over sodium sulfate and evaporated, and the residue was purified by column
chromatography on silica gel (dichloromethane/methanol 40:1 —> 10:1). The product thus obtained
20 fianolictriturated in methanol and filtered off affording 540 mg (14% of th.) of the title compound. Themother liquor was evaporated and the residue purified by two-fold RP-HPLC (Reprosil
C18, gradient 10-95% acetonitrile/0.l% aq. formic acid). The fractions containing pure product
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—110—
were ed and neutralized with sat. aq. sodium hydrogencarbonate solution. The acetonitrile
solvent was evaporated, and the aqueous phase was extracted with ethyl acetate. The combined
organic phases were dried over sodium sulfate and evaporated affording 395 mg (13% of th.) as a
second batch of the title compound.
5 Method 2.‘
A solution of Intermediate 21A (291 mg, 0.82 mmol) in acetic acid (2.9 ml) was treated with 37%
aq. formaldehyde on (104 pl, 1.39 mmol) and 2—oxopiperazine (139 mg, 1.39 mmol). The mix—
ture was stirred at 60°C for 3 h and then evaporated. Purification by preparative RP-HPLC
(Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid) afforded 184 mg (44% of th.) of
10 the title compound.
LC-MS (method 4): R = 0.77 min; MS (ESIpos): m/z = 467 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.00 (s, 1H), 7.73 (br. s, 1H), 7.37 (s, 1H), 7.31 (s, 1H), 6.84
(s, 1H), 4.41 (s, 2H), 3.97 (s, 2H), 3.96 (s, 3H), 3.20 (s, 3H), 3.15-3.08 (br. s, 2H), 3.01 (s, 2H),
2.64 (br. t, 2H), 2.45 (s, 3H) ppm.
15 Example 2
4— { [4-Amino(methoxymethyl)(7-methoxy—5-methylbenzothiophen—2-yl)pyrrolo [2, l —f] —
[1 ,2,4]triazin—7-yl]methyl}piperazin—2-one ochloride
fiution of Example 1 (100 mg, 214 umol) in 1,4—dioxane (2 ml) was treated with a 4 M solution 20 drogen de in 1,4-dioxane (2 ml, 8 mmol). The t was evaporated g 130 mg
(quant) of the title compound.
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—111—
LC-MS (method 2): R = 0.79 min; MS (ESIpos): m/z = 467 (M+H)+
1H-NMR (400 MHz, DMSO-da): 8 = 8.39 (br. s, 1H), 8.31-8.53 (br. s, 1H), 8.17 (s, 1H), 7.38 (s,
1H), 7.34 (s, 1H), 6.87 (s, 1H), 6.21-6.42 (br. s, 1H), 4.81 (br. s, 2H), 4.52 (br. s, 2H), 3.96 (s,
3H), 3.57 (s, 2H), .72 (m, 4H), 3.26 (s, 3H), 2.46 (s, 3H) ppm.
5 Example 3
(3R)—3 —( { [4-Amino(methoxymethyl)(7—methoxy—5-methylbenzothiophen—2-yl)pyrrolo[2, l —f] —
[1 ,2,4] triazinyl]methyl} amino)pyrrolidinone ochloride
NH
A solution of Intermediate 13A (520 mg, 1.36 mmol) in methanol (15 ml) and acetic acid (156 pl,
10 27 mmol) was treated with (R)arninopyrrolidin—2-one (503 mg, 5.0 mmol) and triacetoxyboro-
hydride (1.06 g, 5.0 mmol). The mixture was stirred at rt overnight and then ated. Purification
by preparative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.l% aq. formic acid) and
lyophilization of the product thus obtained from a 4 M on of hydrogen de in 1,4—dioxane
afforded 272 mg (36% of th.) of the title compound.
15 LC-MS (method 2): R. = 0.70 min; MS (ESIpos): m/z = 467 (M+H)+
1H-NMR (400 MHz, DMSO-ds): d = 9.62 (br. s, 1H), 9.46 (br. s, 1H), 8.56-8.22 (br. s, 1H), 8.44
(s, 1H), 8.19 (s, 1H), 7.38 (s, 1H), 7.34 (s, 1H), 6.87 (s, 1H), 6.54-6.12 (br. s, 1H), 4.89—4.65 (m,
2H), 4.58-4.46 (m, 2H), .07 (br. s, 1H, overlap With water peak), 3.96 (s, 3H), 3.36—3.16 (m,
a 3.25 (s, 3H), 2.48-2.39 (m, 1H), 2.46 (s, 3H), 2.23-2.06 (m, 1H) ppm.
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e 4
(3R)-3 -( { [4-Arnino(methoxymethyl)-5—(7—methoxymethylbenzothiophen—2-yl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—7-y1]methy1} amino)pyrrolidin—2—one
NH
A solution of Intermediate 13A (2.0 g, 5.2 mmol) in methanol (58 ml) and acetic acid (0.6 ml) was
treated with (R)aminopyrrolidin—2—one (785 mg, 7.8 mrnol) and triacetoxyborohydride (3.32 g,
15.6 mmol). The mixture was stirred at rt overnight. After this, the reaction mixture was diluted with
sat. aq. sodium hydrogencarbonate solution and ted three times with ethyl acetate. The
combined organic phases were dried over sodium sulfate and evaporated. The residue was purified
10 by two-fold column chromatography on silica gel (dichloromethane/methanol 40:1 to 10:1) to afford
957 mg (37% of th.) of the title compound.
LC—MS (method 4): R: 0.72 min; MS (ESIpos): m/z = 467 (M+H)+
lH—NMR (400 MHz, DMSO-ds): 5 = 8.01 (s, 1H), 7.75 (s, 1H), 7.35 (s, 1H), 7.31 (s, 1H), 6.85 (s,
1H), 4.46-4.34 (m, 2H), 4.24—4.02 (m, 2H), 3.96 (s, 3H), .04 (m, 3H), 3.21 (s, 3H), 2.45 (s,
15 3H), 2.40—2.27 (m, 1H), 1.80-1.65 (m, 1H) ppm.
Example 5
4— { [4-Amino(ethoxymethyl)(7-methoxy—5—methylbenzothiophen—2-y1)pyrrolo [2, 1 —f] [1 ,2,4] -
triazin—7-yl]methyl}piperazin—Z-one
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Method 1:
A solution of Intermediate 17A (2 g, 5.05 mmol) in THF (100 ml) was d at 0°C with
2—oxopiperazine (1.01 g, 10.1 mmol), sodium triacetoxyborohydride (1.07 g, 5.04 mmol) and acetic
acid (0.29 ml, 5.04 mmol). The resulting mixture was stirred at 0°C for 30 min. Four additional
portions of sodium triacetoxyborohydride (1.07 g, 5.04 mmol) and of acetic acid (0.29 ml, 5.04
mmol) were added every 30 s, and the ing mixture was d for further 30 min at 0°C,
then for 25 min at 35°C and finally at rt overnight. The on was quenched with 10% aq. sodium
chloride solution and extracted twice with ethyl acetate. The combined organic layers were
10 evaporated. The residue was purified by column chromatography over silica gel (dichloromethane/
methanol 95:5 —> 90:10) affording 360 mg (17% of th.) of the compound described in Example 86
(see below) and 1.82 g of the title compound in separate fractions. The title product thus obtained
was suspended in ethanol (20 ml), refluxed for 2 h and then cooled to 15°C. The solid was filtered
off and washed with ethanol affording 1.63 g (67% of th.) of the pure title compound.
15 Method 2:
A solution of Example 13 (930 mg, 1.9 mmol) in dichloromethane (18 ml) was d with thionyl
chloride (210 pl, 2.8 mmol) and stirred at rt for 15 min. After evaporation, the residue was dissolved
in ethanol (18 ml) and treated with DIPEA (670 ul, 3.8 mmol). The mixture was stirred at 70°C for
2 h and then evaporated. The residue was purified by column chromatography on silica gel
20 oromethane/methanol 98:2 —> 90:10). The product thus obtained was triturated in an aceto-
nitrile/diethylether mixture and filtered. The filtrate was evaporated, and the residue was re—purified
Dolumn chromatography on silica gel (dichloromethane/methanol 98:2 —> . Again, the
product thus obtained was ated in acetonitrile/diethylether and filtered. This procedure was
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—114—
repeated one more time. The three batches of solids obtained in this way were combined, triturated in
acetonitrile/diethylether once again and finally filtered off affording 600 mg (62% of th.) of the title
compound.
Method 3.‘
A solution of ediate 22A (720 mg, purity 89%, 1.74 mmol) in acetic acid (10 ml) was stirred
with piperazin—2-one (261 mg, 2.61 mmol) at 60°C. To this, 37% aq. formaldehyde solution (260 pl,
3.48 mmol) was added in three portions after 0, 3 and 12 h, respectively, and the mixture was stirred
at 60°C for a total of 24 h. Then, the volatiles were removed under reduced pressure, and the e
was partitioned n ethyl acetate and sat. aq. sodium hydrogencarbonate solution. The organic
10 phase was washed with sat. aq. sodium de solution, dried with magnesium sulfate and
evaporated. The residue was dissolved in a mixture of methanol and dichloromethane, adsorbed on
diatomaceous earth, dried in vacuo and purified by flash-chromatography on silica gel (gradient
0-6% methanol/dichloromethane). The product ons were combined, evaporated and re-purified
by preparative RP-HPLC (Reprosil C18, nt 30-50% acetonitrile/0.2% aq. TFA). The product
15 fractions were combined again, diluted with sat. aq. sodium hydrogencarbonate solution and
ted with ethyl acetate. The organic phase was washed with sat. aq. sodium chloride solution,
dried with magnesium sulfate and evaporated yielding 281 mg (31% of th.) of the title compound.
LC—MS (method 2): R. = 0.86 min; MS (ESIpos): m/z = 481 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.01 (s, 1H), 7.8-8.05 (br. s, 1H), 7.74 (br. s, 1H), 7.38 (s,
20 1H), 7.31 (s, 1H), 6.85 (s, 1H), 5.6-5.9 (br. s, 1H), 4.45 (s, 2H), 3.97 (s, 2H), 3.94 (s, 3H), 3.41 (q,
2H), 3.09-3.13 (m, 2H), 3.02 (s, 2H), 2.63—2.69 (br. s, 2H), 2.45 (s, 3H), 1.07 (t, 3H) ppm.
Example 6
4- {[4-Amino(ethoxymethyl)(7-methoxymethylbenzothiophenyl)pyrrolo[2,1-f][1 ,2,4] -
n—7-yl]methyl}piperazin—2-one dihydrochloride
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—115—
A solution of ediate 17A (60 mg, purity 69%, 104 umol) in methanol (6 ml) was treated with
iperazine (22 mg, 209 umol), sodium orohydride (33 mg, 522 mmol) and acetic acid
(12 ul, 209 umol). The mixture was stirred at 60°C for 16 h and then filtered. The filtrate and the
residue were purified separately by preparative RP-HPLC (Reprosil C18, gradient 40—60% aceto-
nitrile/0.2% aq. TFA). The product fractions were combined, diluted with 1 M hydrochloric acid (3
ml) and evaporated to dryness yielding 46 mg (79% of th.) of the title compound.
LC-MS (method 2): R = 0.87 min; MS (ESIpos): m/z = 481 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.37 (br. s, 1H), 8.31 (br. s, 1H), 8.14 (s, 1H), 7.38 (s, 1H),
10 7.33 (s, 1H), 6.87 (s, 1H), 6.13 (br. s, 1H), 4.80 (br. s, 2H), 4.52 (s, 2H), 3.96 (s, 3H), 3.86 (br. s,
2H), 3.36-3.51 (m, 5H), 2.46 (s, 3H), 1.11 (t, 3H) ppm.
Example 7
(3R)-3 -( {[4-Amino(ethoxymethyl)(7-meth0xymethy1benzothiophenyl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—7-yl]methyl} amino)pyrrolidin—2—one dihydrochloride
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NH
A solution of Intermediate 17A (60 mg, purity 69%, 104 umol) in ol (3 ml) was treated with
(R)aminopyrrolidin—2-one (22 mg, 209 umol), sodium cyanoborohydride (33 mg, 522 umol) and
acetic acid (12 pl, 209 umol). The mixture was stirred at 60°C for 4 h and then filtered. The filtrate
was purified by ative C (Reprosil C18, gradient 40-60% acetonitrile/ 0.2% aq. TFA).
The product fractions were combined, diluted with 1 M hydrochloric acid and evaporated to s
yielding 46 mg (79% of th.) of the title nd.
LC-MS (method 4): R = 0.74 min; MS (ESIpos): m/z = 481 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 9.58-9.75 (m, 1H), 9.33-9.54 (m, 1H), 8.44 (s, 1H), 8.27-8.71
10 (br. s, 1H), 8.19 (s, 1H), 7.38 (s, 1H), 7.34 (s, 1H), 6.87 (s, 1H), 6.18-6.48 (br. s, 1H), 4.68-4.87
(m, 2H), 4.49-4.62 (q, 2H), 3.96 (s, 3H), 3.45 (q, 2H), 3.18-3.35 (m, 2H), 2.46 (s, 4H), 2.08-2.22
(m, 1H), 1.10 (t, 3H) ppm.
Example 8
(3R)-3 -( { [4-Amino(ethoxymethyl)-5—(7—methoxymethylbenzothiophen—2-yl)pyrrolo[2, 1 -fl -
15 [1 ,2,4]triazin—7-yl]methyl} amino)pyrrolidin—2—one
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—ll7—
NH
A solution of Intermediate 17A (226 mg, purity 75%, 428 umol) in methanol (4 ml) was treated with
aminopyrrolidin—2-one (85 mg, 855 umol), sodium cyanoborohydride (134 mg, 2.14 mmol)
and acetic acid (49 pl, 855 umol). The mixture was stirred at rt for 1.5 h. After this, the mixture was
directly separated by preparative RP-HPLC (Reprosil C18, gradient 40-60% acetonitrile/0.2% aq.
TFA). The product fractions were combined, diluted with sat. aq. sodium hydrogencarbonate
solution and extracted with ethyl acetate. The combined organic phases were washed with sat. aq.
sodium chloride solution, dried over magnesium sulfate and evaporated to s yielding 180 mg
(88% of th.) of the title compound.
10 LC-MS (method 4): R = 0.74 min; MS (ESIpos): m/z = 481 (M+H)+
1H—NMR (400 MHz, s): 8 = 8.00 (s, 1H), 7.76 (s, 1H), 1 (br. s, 1H), 7.35 (s, 1H),
7.31 (s, 1H), 6.84 (s, 1H), 5.6-5.9 (br. s, 1H), 4.39-4.49 (m, 2H), 4.04-4.23 (m, 2H), 3.96 (s, 3H),
3.41 (q, 2H), 3.05-3.23 (m, 3H), 2.45 (s, 3H), 2.31—2.40 (m, 1H), 1.68-1.79 (m, 1H), 1.08 (t, 3H)
ppm.
15 Example 9
N2- { [4-Amino(ethoxymethyl)(7-methoxy—5-methylbenzothiophen—2-yl)pyrrolo [2, l -f] —
[1 ,2,4]triazin—7-yl]methyl} amide dihydrochloride
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—118—
NH2
A solution of Intermediate 17A (60 mg, purity 69%, 104 umol) in ol (3 ml) was treated with
glycinamide hloride (23 mg, 209 umol), sodium cyanoborohydride (32 mg, 522 mmol) and
acetic acid (12 pl, 209 umol). The e was stirred at 60°C for 16 h. After filtration, the e
5 was separated by preparative RP-HPLC (Reprosil C18, nt 20-40% acetonitrile/O.2% aq.
TFA). The product fractions were combined, d with 1 M hydrochloric acid, evaporated to
dryness and combined with the residue from the filtration step. This material was re-purified by two-
fold preparative RP-HPLC (Reprosil C18, gradient 20-40% acetonitrile/0.2% aq. TFA). The pro-
duct fractions were combined again, diluted with 1 M hydrochloric acid and evaporated to dryness
10 yielding 7.4 mg (13% of th.) of the title compound.
LC-MS (method 2): R = 0.80 min; MS (ESIpos): m/z = 455 (M+H)+
1H—NMR (500 MHz, DMSO-da): 8 = 9.33 (br. s, 2H), 9.05 (br. s, 1H), 8.31 (s, 1H), 7.93 (br. s,
1H), 7.58 (br. s, 1H), 7.40 (s, 1H), 7.35 (s, 1H), 7.05 (br. s, 1H), 6.88 (s, 1H), 4.65 (br. m, 2H),
4.56 (s, 2H), 3.96 (s, 3H), 3.74 (br. m, 2H), 3.46 (q, 2H), 2.46 (s, 3H), 1.10 (t, 3H) ppm.
15 e 10
6—(Ethoxymethyl)(7-methoxy—5-methylbenzothiophen—2-yl)(morpholinylmethyl)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—4-amine
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A solution of Intermediate 17A (55 mg, purity 73%, 101 umol) in methanol (3 ml) was treated with
line (18 mg, 202 umol), sodium cyanoborohydride (19 mg, 303 mmol) and acetic acid (18 ul,
304 umol). The mixture was stirred at 60°C for 18 h. r s of line (18 mg, 202
umol), sodium cyanoborohydride (19 mg, 303 mmol) and acetic acid (18 ul, 304 umol) were added,
and stirring at 60°C was continued for another 3 h. The resulting mixture was diluted with THF to
dissolve precipitates and separated by preparative RP—HPLC (Reprosil C18, gradient 20—40%
itrile/O.2% aq. TFA). The t fractions were combined and ated to dryness. The
residue was dissolved in methanol and filtered through an anion exchange cartridge (Stratospheres
10 SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was evaporated
yielding 32 mg (68% of th.) of the title compound.
LC-MS (method 2): R = 0.78 min; MS (ESIpos): m/z = 468 (M+H)+
‘H—NMR (400 MHz, DMSO-ds): 5 = 7.98 (s, 1H), 7.9 (br. s, 1H), 7.37 (s, 1H), 7.31 (s, 1H), 6.84
(s, 1H), 5.75 (br. s, 1H), 4.45 (s, 2H), 3.95 (s, 3H), 3.88 (s, 2H), 3.51-3.56 (m, 4H), 3.40 (q, 2H),
15 2.4—2.5 (m, 4H), 2.45 (s, 3H), 1.06 (t, 3H) ppm.
Example 11
1 —(4- {[4-Amino(ethoxymethyl)(7-methoxymethylbenzothiophen—2-yl)pyrrolo[2, 1 —f]—
[1 ,2,4]triazin—7-yl]methyl}piperazin— 1 -yl)ethanone dihydrochloride
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—l20—
A solution of Intermediate 17A (130 mg, 0.328 mmol) in methanol (8 ml) was treated with
N—acetylpiperazine (63 mg, 0.492 mmol), sodium cyanoborohydride (103 mg, 1.63 mmol) and acetic
acid (37 ul, 0.655 mmol). The mixture was stirred at 60°C for 3 h. It was then combined with the
reaction mixture of a 30 mg test run, evaporated and purified by preparative RP-HPLC (Reprosil
C18, gradient 10-95% acetonitrile/0.1% aq. formic acid). The product thus obtained was lyophilized
from 1,4-dioxane, then ved in ethyl acetate and washed with sat. aq. sodium en-
carbonate on. The organic layer was dried over magnesium sulfate, evaporated and lyophilized
again from 1,4-dioxane. Re-purification by preparative RP-HPLC (Reprosil C18, gradient 10-95%
10 acetonitrile/0.1% aq. formic acid), followed by two-fold column chromatography on silica gel
(dichloromethane/methanol 98:2 —> 4:1) and lyophilization from a 4 M solution of hydrogen chloride
in 1,4-dioxane afforded 49 mg (18% of th.) of the title nd.
LC—MS d 2): R = 0.82 min; MS (ESIpos): m/z = 509 (M+H)+
1H—NMR (400 MHZ, DMSO-ds): inter a]. 8 = .26 (br. s, 1H), 8.17 (s, 1H), 7.38 (s, 1H), 7.34
15 (s, 1H), 6.87 (s, 1H), 6.53-6.05 (br. s, 1H), 4.75 (br. s, 2H), 4.56 (br. s, 2H), 3.96 (s, 3H), 3.45 (q,
2H, overlap with water peak), 2.46 (s, 3H), 2.03 (s, 3H), 1.09 (t, 3H) ppm.
Example 12
[4-Amino(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo[2, l -f] -
[1 ,2,4] triazin—6-yl]methanol bis(formiate)
D
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—l2l—
x2 HCOZH
A solution of Intermediate 23A (95 mg, 152 umol) in a 4 M solution of hydrogen chloride in 1,4-
dioxane (3.7 ml) was stirred at rt for 2 h. After evaporation, the residue was purified by ative
RP-HPLC (Reprosil C18, gradient 10-95% itrile/0.1% aq. formic acid) affording 44 mg (62%
ofth.) of the title compound.
LC—MS (method 2): R: 0.63 min; MS (ESIpos): m/z = 439 (M+H)+
1H-NMR (400 MHZ, DMSO-ds): 8 = 8.28 (br. s, 2H), 7.98 (s, 1H), 7.37 (s, 1H), 7.31 (s, 1H), 6.85
(s, 1H), 4.50 (s, 2H, overlap with water peak), 3.98 (s, 2H, overlap With water peak), 3.95 (s, 3H,
overlap With water peak), 2.95-2.84 (m, 4H), 2.61-2.55 (m, 4H, overlap With DMSO peak), 2.45 (s,
10 3H) ppm.
Example 13
4— {[4—Amino(hydroxymethyl)(7-methoxy—5—methyl- l -benzothiophen—2-yl)pyrrolo [2, 1 —f] [l ,2,4] -
triazin—7—y1]methyl}piperazin—2-one
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—122—
A solution of Intermediate 20A (1.34 g, 3.96 rmnol) in acetic acid (13.9 ml) was treated with 37%
aq. formaldehyde solution (501 ul, 6.6 mrnol) and 2-oxopiperazine (670 mg, 6.6 mmol). The mixture
was d at 50°C for 2 h and then evaporated. Purification by column chromatography on silica
5 gel (dichloromethane/methanol 98:2 —> 90:10) afforded 942 mg (49% of th.) of the title compound.
LC-MS (method 2): R: = 0.67 min; MS (ESIpos): m/z = 453 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.99 (s, 1H), 7.76 (br. s, 1H), 7.39 (s, 1H), 7.31 (s, 1H), 6.84
(s, 1H), 4.51 (s, 2H), 4.03 (br. s, 2H), 3.95 (s, 3H), 3.18-3.13 (m, 2H), 3.07-2.98 (m, 2H), 2.72-
2.60 (m, 2H), 2.45 (s, 3H) ppm.
10 Example 14
7— { [(3S)-3 -Amino-3 -methylpyrrolidin— 1 -yl]methyl} —6-(methoxymethyl)(7-methoxymethyl— 1 —
benzothiophen—2-yl)pyrrolo[2, 1 -f] [1 riazin—4—amine trihydrochloride
ation] na
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—l23—
A solution of Intermediate 21A (100 mg, 0.28 mmol) in acetic acid (1 ml) was treated with 37% aq.
formaldehyde on (25 ul, 0.33 mmol) and tert—butyl [(3S)methylpyrrolidin—3—yl]carbamate
(Yoshida et al., Chem. Pharm. Bull. 1996, 44 (7), 1376-1386; 67 mg, 0.33 mmol). The mixture was
stirred at rt for 3 h and then evaporated. The residue was diluted with sat. aq. sodium
hydrogencarbonate solution, and solid potassium carbonate was added until no more gas generation
occurred. The s phase was extracted three times with ethyl acetate. The combined organic
phases were dried over sodium sulfate and evaporated. The residue was dissolved in a 4 M solution
of hydrogen de in oxane (2 ml) and stirred at rt for 2 h. After evaporation, the residue
was purified by two-fold preparative RP-HPLC (first Reprosil C18, gradient 10-95% aceto-
10 nitrile/0.1% aq. formic acid; then Shield RP18, gradient 5-50% methanol + 0.1% aq. TFA/0.1% aq.
TFA). The t thus obtained was lyophilized from a 4 M solution of hydrogen chloride in 1,4-
dioxane affording 14 mg (8% of th.) of the title compound.
LC-MS (method 2): R. = 0.67 min; MS (ESIpos): m/z = 467 (M+H)+
1H-NMR (400 MHz, DMSO-ds): inter al. 8 = 8.50-8.22 (br. s, 1H), 8.14 (s, 1H), 7.36 (s, 1H), 7.34
15 (s, 1H), 6.87 (s, 1H), 6.36-6.01 (br. s, 1H), 4.88 (br. s, 2H), 4.56 (br. s, 2H), 3.96 (s, 3H, overlap
with water peak), 3.26 (s, 3H), 2.46 (s, 3H), 1.52 (s, 3H) ppm.
Example 15
7— { [(3S)-3 -Amino-3 -methylpyrrolidin— 1 -yl]methyl} (ethoxymethyl)(7-methoxy—5-methyl—1 -
hiophen—2-yl)pyrrolo[2, 1 -f] [1 ,2,4]triazin—4-amine
20
A solution of ediate 17A (100 mg, 271 umol) in acetic acid (1 ml) was treated with 37% aq.
naldehyde solution (24 pl, 326 umol) and tert-butyl [(315)methylpyrrolidinyl]carbamate
(Yoshida et al., Chem. Pharm. Bull. 1996, 44 (7), 1376-1386; 65 mg, 326 umol). The mixture was
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—124—
stirred at 60°C for 4 h. Then, further amounts of 37% aq. formaldehyde solution (10 pl, 136 umol)
and tert—butyl [(3S)methylpyrrolidin—3—yl]carbamate (27 mg, 136 umol) were added, and stirring
at 60°C was continued ght. After evaporation, the residue was ioned between ethyl
acetate and sat. aq. sodium hydrogencarbonate solution. Solid potassium carbonate was added until
5 no more gas generation occurred. The aqueous phase was extracted three times with ethyl acetate.
The combined organic phases were dried over sodium sulfate, evaporated and purified by preparative
RP—HPLC (Reprosil C18, nt 10-95% acetonitrile/O.1% aq. formic acid). The product thus
obtained was dissolved in a 4 M on of hydrogen chloride in 1,4-dioxane (2 ml) and stirred at rt
for 1 h. After evaporation, the residue was purified by ative RP-HPLC (Reprosil C18,
10 nt 10-95% acetonitrile/0.1% aq. formic acid) affording 24 mg (18% of th.) of the title
compound.
LC-MS (method 4): R. = 0.70 min; MS (ESIpos): m/z = 481 (M+H)+
lH-NMR (400 MHz, DMSO-da): inter al. 6 = 8.19 (s, 1H), 7.38 (s, 1H), 7.34 (s, 1H), 6.87 (s, 1H),
4.90 (br. s, 2H), 3.96 (s, 3H), 3.46 (q, 3H), 2.46 (s, 3H), 1.54 (s, 3H), 1.14—1.05 (m, 3H) ppm.
15 Example 16
1 -(4- {[4-Amino(methoxymethyl)—5—(7—methoxy—5-methy1— 1 -benzothiophenyl)pyrrolo[2, 1 —f] -
[1 ,2,4] triazin—7-yl]methyl}piperazin— 1 -yl)ethanone dihydrochloride
A solution of Intermediate 21A (50 mg, 141 umol) in acetic acid (1 ml) was treated with 37% aq.
20 formaldehyde on (4.6 pl, 169 umol) and ylpiperazine (21.6 mg, 169 umol). The mixture
Dstirred at 75°C for 3 h. After evaporation, the residue was purified by preparative RP-HPLC
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—125—
(Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid). Lyophilization from a 4 M
on ofhydrogen de in 1,4-dioxane afforded 34 mg (39% of th.) of the title compound.
LC-MS (method 5): R = 1.78 min; MS (ESIpos): m/z = 495 (M+H)+
1H-NMR (400 MHz, DMSO-ds): inter al. 8 = 8.70-8.35 (br. s, 1H), 8.18 (s, 1H), 7.37 (s, 1H), 7.34
(s, 1H), 6.86 (s, 1H), 6.61-6.19 (br. s, 1H), 4.74 (br. s, 2H), 4.54 (br. s, 2H), 3.96 (s, 3H), 3.25 (s,
3H), 2.46 (s, 3H), 2.03 (s, 3H) ppm.
Example 17
6—(Methoxymethyl)(7-methoxymethyl— 1 —benzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—4-arnine formiate
X HCOOH
10
A solution of ediate 23A (110 mg, 204 umol) in dichloromethane (2.2 ml) was d with
thionyl chloride (29 pl, 408 umol) and stirred at rt for 15 min. After evaporation, the residue was
dissolved in methanol (2.2 ml) and d with DIPEA (39 pl, 224 umol). The mixture was stirred
at 70°C for l h and then evaporated. The residue was taken up in a 4 M solution of hydrogen
15 chloride in oxane (2.2 ml) and stirred at rt for 2 h. Evaporation and purification by preparative
RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) afforded 44.9 mg
(46% of th.) of the title compound.
LC-MS (method 2): R = 0.73 min; MS (ESIpos): m/z = 453 (M+H)+
lH-NMR (400 MHz, s): 5 = 8.28 (br. s, 1H), 8.00 (s, 1H), 7.35 (s, 1H), 7.31 (s, 1H), 6.85
20 DH), 4.41 (s, 2H), 4.00-3.90 (m, 5H), 3.00-2.90 (m, 4H), 2.65-2.56 (m, 4H), 2.45 (s, 3H) ppm.
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—126—
Example 18
6—(Ethoxymethyl)(7-methoxymethyl— 1 —benzothiophen—2-yl)(piperazin— 1 hyl)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—4-arnine
A solution of Intermediate 23A (80 mg, 317 umol) in dichloromethane (2 ml) was treated with
thionyl chloride (22 pl, 297 umol) and stirred at rt for 15 min. After ation, the residue was
dissolved in ethanol (2 m1) and treated with DIPEA (28 pl, 163 umol). The mixture was stirred at
70°C for 1 h and then evaporated. The residue was taken up in a 4 M on of hydrogen chloride
in 1,4-dioxane (2 m1) and stirred at rt for 1 h. Evaporation and purification by preparative RP—HPLC
10 (Reprosil C18, gradient 10-95% itrile/0.1% aq. formic acid) afforded 35 mg (50% of th.) of
the title compound.
LC-MS (method 2): R = 0.82 min; MS (ESIpos): m/z = 467 (M+H)+
1H—NMR (400 MHz, DMSO-da): infer a}. 8 = 8.09 (br. s, 1H), 7.36 (s, 1H), 7.32 (s, 1H), 6.86 (s,
1H), 4.50 (br. s, 2H), 3.96 (s, 3H), 3.42 (q, 2H, overlap with water peak), 2.45 (s, 3H), 1.05 (t, 3H)
15 ppm.
Example 19
6-(Ethoxymethyl)(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -y1methy1)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—4-arnine dihydrochloride
D
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—127—
A solution of Example 18 (50 mg, 107 umol) in a 4 M on of hydrogen de in 1,4—dioxane
(1 ml) was stirred at rt for 15 min. After evaporation 55 mg (93% of th.) of the title compound were
obtained.
LC—MS (method 4): R = 0.74 min; MS (ESIpos): m/z = 467 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): inter a7. 5 = 8.18 (s, 1H), 7.37 (s, 1H), 7.34 (s, 1H), 6.87 (s, 1H),
4.76 (br. s, 2H), 4.60 (br. s, 2H), 3.96 (s, 3H), 3.45 (q, 2H), 2.46 (s, 3H), 1.09 (1:, 3H) ppm.
Example 20
1 -(4- {[4-Amino(ethoxymethyl)(7-methoxymethylbenzothiophen—2-yl)pyrrolo[2, 1 —f]—
10 [1 ,2,4] triazin—7-yl]methyl} piperazin— 1 -yl)ethanone
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—128—
A solution of Example 18 (70 mg, 150 umol) in romethane (2 ml) and THF (08 ml) was
treated with acetyl de (21 pl, 300 umol) and sodium ate (127 mg, 1.2 mmol). The mix-
ture was stirred at rt overnight. After evaporation, the residue was ed by preparative RP—HPLC
(Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) affording 27 mg (31% of th.) of
the title compound.
LC-MS (method 4): R. = 0.77 min; MS (ESIpos): m/z = 509 (M+H)+
1H—NMR (400 MHz, g): 5 = 7.98 (s, 1H), 7.37 (s, 1H), 7.31 (s, 1H), 6.84 (s, 1H), 4.45 (s,
2H), 3.95 (s, 3H), 3.92 (s, 2H), 3.45-3.36 (m, 6H), 2.48-2.38 (m, 7H, overlap with DMSO peak),
1.97 (s, 3H), 1.06 (t, 3H) ppm.
10 Example 21
4-( {4-Amino [(2-hydroxyethoxy)methyl]-5—(7-methoxymethylbenzothiophen—2-yl)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—7-yl}methyl)piperazin—2—one formiate
X HCOOH
A solution of Example 13 (60 mg, 132 umol) in dichloromethane (2 ml) was treated with thionyl
15 chloride (14 pl, 198 umol). The mixture was stirred at rt for 15 min and then evaporated. The resi-
due was dissolved in ethylene glycol (500 pl) and stirred at 100°C for 90 min. Purification by pre-
parative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) afforded
34 mg (47% of th.) of the title compound.
LC—MS d 2): R = 0.69 min; MS (ESIpos): m/z = 497 (M+H)+
D
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—129—
1H-NMR (400 MHz, DMSO-ds): 8 = 8.14 (s, 1H), 8.00 (s, 1H), 7.74 (br. s, 1H), 7.42 (s, 1H), 7.31
(s, 1H), 6.84 (s, 1H), 4.49 (s, 2H), 3.99 (s, 2H), 3.96 (s, 3H), 3.50-3.43 (m, 2H), 3.42—3.36 (m, 2H,
overlap with water peak), 3.15-3.07 (m, 2H), 3.03 (s, 2H), 2.69-2.61 (m, 2H), 2.45 (s, 3H) ppm.
e 22
2— { [4-Amino(7-methoxy—5-methylbenzothiophen—2-yl)(piperazin— 1 hyl)pyrrolo[2, 1 -f] -
[1 ,2,4] triazin—6-yl]methoxy} ethanol dihydrochloride
X2 HCI
A solution of Intermediate 23A (100 mg, 185 umol) in dichloromethane (4 ml) was treated with
thionyl chloride (27 ul, 371 umol). The mixture was stirred at rt for 20 min and then evaporated.
10 The residue was dissolved in ethylene glycol/THF (2:1, 1.5 ml) and d at 100°C for 2 h. After
evaporation, the residue was purified by ative RP-HPLC (Reprosil C18, gradient 10-95%
acetonitrile/O.1% aq. formic acid), followed by column chromatography on silica gel (dichloro-
methane/methanol + 0.1% aq. ammonia 98:2 —> 90:10). Lyophilization from a 4 M solution of
hydrogen chloride in 1,4-dioxane ed 67 mg (64% of th.) of the title nd.
15 LC—MS (method 2): R. = 0.66 min; MS (ESIpos): m/z = 483 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): 8 = 8.16 (s, 1H), 7.49 (s, 1H), 7.43 (s, 1H), 6.98 (s, 1H), 4.86 (s,
2H), 4.69 (s, 2H), 4.03 (s, 3H), 3.81-3.49 (m, 12H), 2.50 (s, 3H) ppm.
Example 23
6—(Butoxymethyl)(7-methoxy—5-methyl— 1 —benzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo—
20 Df] [1 ,2,4]triazinamine forrniate
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—l30—
X HCOOH
A solution of Intermediate 23A (100 mg, 185 umol) in dichloromethane (2 ml) was treated with
thionyl chloride (27 pl, 371 umol). The mixture was stirred at rt for 15 min and then ated.
The residue was dissolved in l-butanol (2 ml) and heated to 70°C for 1 h. After evaporation, the
residue was taken up in a 4 M solution of hydrogen chloride in l,4-dioxane (2 ml) and stirred at rt
for 2 h. Evaporation and purification by preparative RP-HPLC (Reprosil C18, gradient 10—95%
acetonitrile/0.1% aq. formic acid) afforded 22 mg (24% of th.) of the title compound.
LC—MS (method 2): Rt = 0.82 min; MS s): m/z = 495 (M+H)+
lH-NMR (400 MHz, DMSO-ds): 5 = 8.29 (s, 1H), 7.99 (s, 1H), 7.35 (s, 1H), 7.29 (s, 1H), 6.84 (s,
10 1H), 4.43 (s, 2H), 3.95 (s, 3H), 3.92 (s, 2H), 3.35 (t, 2H), 2.90—2.79 (m, 4H), 2.45 (s, 3H), 1.47—
1.37 (m, 2H), 1.31-1.18 (m, 2H), 0.80 (t, 3H) ppm.
Example 24
5—(7—Methoxymethyl- 1 thiophen-2—yl)—7—(piperazin— 1 -ylmethyl)(propoxymethyl)pyrrolo—
[2,1-f] [1,2,4]triazin—4-amine bis(fonniate)
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—l3l—
A solution of Intermediate 23A (100 mg, 185 umol) in dichloromethane (2 ml) was treated with
thionyl chloride (27 pl, 371 umol). The mixture was stirred at rt for 15 min and then evaporated.
The residue was dissolved in l-propanol (2 ml), treated with DIPEA (48 ul, 278 umol) and stirred at
rt for l h. After evaporation, the residue was taken up in a 4 M solution of hydrogen chloride in 1,4-
dioxane (2 ml) and stirred at rt for 2 h. Evaporation and purification by preparative RP—HPLC
(Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid) afforded 15 mg (16% of th.) of
the title compound.
LC-MS (method 2): R = 0.78 min; MS (ESIpos): m/z = 481 (M+H)+
10 1H-NMR (400 MHz, DMSO-da): 5 = 8.26 (br. s, 2H), 7.98 (s, 1H), 7.36 (s, 1H), 7.30 (s, 1H), 6.84
(s, 1H), 4.44 (s, 2H), 3.95 (s, 3H), 3.92 (s, 2H), 3.32 (t, 2H), 2.87-2.79 (m, 4H), 1.52-1.39 (m, 2H),
0.81 (t, 3H) ppm.
Example 25
6-[(Cyclopropylmethoxy)methyl] (7-methoxymethylbenzothiophen—2-yl)(piperazinyl-
15 methyl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4—amine bis(formiate)
ation] kirstena
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—l32—
X 2 HCOOH
A on of Intermediate 23A (100 mg, 185 umol) in dichloromethane (2 ml) was treated with
thionyl chloride (27 pl, 371 umol). The mixture was stirred at rt for 15 min and then evaporated.
The residue was dissolved in cyclopropylmethanol (2 ml), treated with DIPEA (48 ul, 278 umol) and
stirred at 70°C for 2 h. After evaporation, the residue was taken up in a 4 M solution of hydrogen
de in l,4-dioxane (2 ml) and stirred at rt for 2 h. Evaporation and purification by preparative
RP—HPLC (Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid) afforded 29 mg (30%
of th.) of the title compound.
LC-MS (method 2): R = 0.78 min; MS (ESIpos): m/z = 493 (M+H)+
10 lH-NMR (400 MHz, DMSO-da): 8 = 8.28 (br. s, 2H), 7.99 (s, 1H), 7.37 (s, 1H), 7.30 (s, 1H), 6.84
(s, 1H), 4.45 (s, 2H), 3.95 (s, 3H), 3.93 (s, 2H), 3.21 (d, 2H), 2.95—2.83 (m, 4H), 2.61—2.56 (m,
4H), 2.45 (s, 3H), 1.01—0.91 (m, 1H), 0.46—0.37 (m, 2H), 0.15-0.08 (m, 2H) ppm.
e 26
6-[(Cyclobutyloxy)methyl] (7-methoxymethyl- 1 thiophen—2-yl)(piperazinyl-
15 methyl)pyrrolo[2,1-f] [1 ,2,4]triazin—4—amine
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—l33—
A solution of Intermediate 23A (85 mg, 157 umol) in dichloromethane (1.7 ml) was d with
thionyl chloride (23 pl, 315 umol). The mixture was stirred at rt for 15 min and then ated.
The residue was dissolved in cyclobutanol (1.7 ml), treated with DIPEA (41 ul, 236 umol) and
stirred at 70°C for 2 h. After evaporation, the residue was taken up in a 4 M solution of hydrogen
chloride in l,4-dioxane (1.7 ml) and stirred at rt for 2 h. Evaporation and purification by preparative
RP—HPLC (Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid) afforded 23 mg (28%
of th.) of the title compound.
LC-MS (method 2): R = 0.82 min; MS (ESIpos): m/z = 493 (M+H)+
10 ‘H-NMR (400 MHz, DMSO-ds): 5 = 8.01 (s, 1H), 7.37 (s, 1H), 7.32 (s, 1H), 6.85 (s, 1H), 4.37 (s,
2H), 4.06-3.86 (m, 6H), 3.14—2.97 (m, 4H), 2.80-2.62 (m, 4H), 2.45 (s, 3H), 2.10-1.96 (1n, 2H),
1.83-1.69 (m, 2H), 1.65-1.52 (m, 1H), 1.49—1.33 (m, 1H) ppm.
Example 27
6-(Isopropoxymethyl)(7-methoxymethyl-1 -benzothiophenyl)(piperazin-1 -ylmethyl)-
15 pyrrolo[2,1-f] ]t1iazinamine forrniate
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—134—
X HCOOH
A solution of Intermediate 23A (65 mg, 120 umol) in dichloromethane (1.3 ml) was treated with
thionyl chloride (17 pl, 241 umol). The mixture was stirred at rt for 15 min and then evaporated.
The residue was dissolved in 2-propanol (1.3 ml), treated with DIPEA (23 ul, 132 umol) and stirred
at 70°C for 1 h. Further DIPEA (23 ul, 132 umol) was added, and the mixture was stirred again at
70°C for 1 h. Then, another portion of DIPEA (63 ul, 362 umol) was added, and stirring was
continued at 90°C for 3 h. After evaporation, the residue was taken up in a 4 M solution of hydrogen
chloride in 1,4-dioxane (1.3 m1) and stirred at rt for 2 h. Evaporation and ation by ative
RP—HPLC (Reprosil C18, nt 10—95% acetonitrile/O.1% aq. formic acid) afforded 23 mg (34%
10 of th.) of the title compound.
LC-MS (method 4): R = 0.74 min; MS (ESIpos): m/z = 481 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.30 (s, 1H), 7.98 (s, 1H), 7.37 (s, 1H), 7.30 (s, 1H), 6.84 (s,
1H), 4.43 (s, 2H), 3.95 (s, 3H), 3.90 (s, 2H), 3.57 (m, 1H, overlap with water peak), 2.88—2.78 (m,
4H), 2.45 (s, 3H), 1.04 (d, 6H) ppm.
15 Example 28
6—[(2-Methoxyethoxy)methyl] (7-methoxy—5—methylbenzothiophen—2-yl)(piperazin— 1 —yl-
methyl)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amine formiate
[Annotation] kirstena
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—l35—
A solution of Intermediate 23A (100 mg, 185 umol) in dichloromethane (2 ml) was treated with
thionyl chloride (27 pl, 371 umol). The mixture was stirred at rt for 15 min and then evaporated.
The residue was ved in 2-methoxyethanol (2 ml), d with DIPEA (35 ul, 204 umol) and
stirred at 70°C for l h. After evaporation, the residue was taken up in a 4 M solution of hydrogen
chloride in l,4-dioxane (2 ml) and stirred at rt for 2 h. Evaporation and purification by preparative
RP—HPLC (Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid) afforded 50 mg (50%
of th.) of the title compound.
LC-MS d 2): R. = 0.75 min; MS (ESIpos): m/z = 497 (M+H)+
10 1H-NMR (400 MHz, DMSO-d5): 8 = 8.26 (br. s, 1H), 7.99 (s, 1H), 7.39 (s, 1H), 7.30 (s, 1H), 6.84
(s, 1H), 4.48 (s, 2H), 3.95 (s, 3H), 3.94 (s, 2H), 3.52-3.46 (m, 2H, overlap with water peak), 3.44-
3.37 (m, 2H, overlap with water peak), 3.20 (s, 3H), 2.94-2.84 (m, 4H), 2.61-2.54 (m, 4H, overlap
with DMSO peak), 2.45 (s, 3H) ppm.
e 29
15 5—(7-Methoxymethylbenzothiophen—2—yl)—7—(piperazin— 1 -ylmethyl) [(2,2,2-trifluoroethoxy)-
methyl]pyrrolo [2, l -f] [l ,2,4]triazin—4-amine formiate
[Annotation] kirstena
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—l36—
A solution of Intermediate 23A (100 mg, 185 umol) in romethane (2 ml) was treated with
thionyl chloride (27 pl, 371 umol). The mixture was stirred at rt for 15 min and then evaporated.
The residue was dissolved in 2,2,2-trifluoroethanol (2 ml), treated with DIPEA (35 ul, 204 umol)
and stirred at 70°C for 1 h. Further DIPEA (35 ul, 204 umol) was added, and stirring was continued
at rt for l h. After ation, the residue was taken up in a 4 M solution of hydrogen chloride in
1,4—dioxane (2 ml) and stirred at rt for 2 h. Evaporation and purification by preparative RP—HPLC
(Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. formic acid) afforded 23 mg (23% of th.) of
the title compound.
10 LC-MS (method 2): R. = 0.79 min; MS (ESIpos): m/z = 521 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.28 (br. s, 1H), 8.00 (s, 1H), 7.37 (s, 1H), 7.30 (s, 1H), 6.85
(s, 1H), 4.66 (s, 2H), 4.08 (q, 2H), 3.95 (s, 3H), 3.92 (s, 2H), .75 (m, 4H), 2.45 (s, 3H) ppm.
Example 30
Aminoethoxy)methyl] (7-methoxymethylbenzothiophen—2-yl)(piperazin- l -ylmethyl)-
15 pyrrolo[2,l-f] [1,2,4]t1iazinamine trihydrochloride
ation] na
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—137—
X3HC|
A solution of Intermediate 23A (150 mg, 278 umol) in dichloromethane (5 ml) was treated with
thionyl chloride (40 pl, 556 umol). The mixture was stirred at rt for 15 min and then evaporated.
The residue was dissolved in THF (0.5 ml) and treated with tert—butyl (2-hydroxyethyl)carbamate (1
ml) and DIPEA (242 ul, 1.39 mrnol). The mixture was stirred at 100°C overnight. After evapo-
ration, the residue was taken up in 1,4-dioxane (10 ml), treated with a 4 M on of en
chloride in 1,4-dioxane (10 ml) and stirred at rt for 1 h. The volatiles were d under reduced
pressure, and the e was purified by preparative RP-HPLC (Reprosil C18, gradient 10-95%
acetonitrile/0.1% aq. formic acid). Further purification by preparative RP-HPLC (Shield RP18, 25%
10 acetonitrile/75% 0.01% aq. TFA) followed by lyophilization from a 4 M solution of hydrogen
chloride in 1,4-dioxane afforded 10 mg (6% of th.) of the title compound.
LC-MS (method 2): R = 0.58 min; MS (ESIpos): m/z = 482 (M+H)+
1H-NMR (400 MHz, D20): 8 = 8.12 (s, 1H), 7.50 (s, 1H), 7.44 (s, 1H), 6.99 (s, 1H), 4.61 (s, 2H),
4.04 (s, 3H), 3.88-3.80 (m, 1H), 3.70-3.60 (m, 3H), 3.52-3.46 (m, 4H), 3.40-3.34 (m, 4H), 3.07 (t,
15 2H), 2.51 (s, 3H) ppm.
Example 31
Methyl { [4-amino(7-methoxy—5-methyl- 1 —benzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—6-yl]methoxy} acetate
D
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—138—
A solution of Intermediate 23A (50 mg, 92 umol) in dichloromethane (2 ml) was treated with thionyl
chloride (13 pl, 186 umol). The mixture was stirred at rt for 15 min and then evaporated. The
e was dissolved in glycolate (1 ml), treated with DIPEA (80 ul, 464 umol) and stirred at
70°C for 2 h. After evaporation, the e was taken up in romethane (1.6 ml), treated with
trifluoroacetic acid (400 pl, 5.19 mrnol) and stirred at rt for 1 h. Then, the mixture was evaporated,
and the residue was purified by preparative RP—HPLC (Reprosil C18, gradient 10—95%
acetonitrile/O.1% aq. TFA). Fractions containing the title compound were lized with sat. aq.
sodium hydrogencarbonate solution and evaporated. The residue was taken up in water, and the
10 mixture was extracted three times with dichloromethane. The combined organic phases were dried
over sodium sulfate and evaporated ing 21 mg (43% of th.) of the title compound.
LC-MS (method 2): R. = 0.72 min; MS (ESIpos): m/z = 511 (M+H)+
‘H—NMR (400 MHz, DMSO-ds): 5 = 7.99 (s, 1H), 7.39 (s, 1H), 7.31 (s, 1H), 6.85 (s, 1H), 4.59 (s,
2H), 4.11 (s, 2H), 3.95 (s, 3H), 3.90 (s, 2H), 3.57 (s, 3H), 2.81-2.69 (m, 4H), 2.48-2.39 (m, 7H)
15
Example 32
{ [4-Amino(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—6-yl]methoxy} acetic acid
D
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—l39—
A on of Intermediate 24A (200 mg, 327 umol) in THF (14 ml) was treated with 2.5 M aq.
lithium hydroxide solution (16 ml) and stirred at 80°C for 2 h. The mixture was then ed with
the reaction mixture of a 27 mg test run. The aqueous phase was extracted twice with THF, and the
combined organic phases were evaporated. The residue was dissolved in a 4 M solution of hydrogen
chloride in 1,4-dioxane (2 ml) and d at rt for 3 h. After evaporation, the residue was purified by
preparative RP-HPLC (Reprosil C18, nt 10—95% acetonitrile/O.1% aq. TFA). Lyophilization
from a 4 M solution of hydrogen chloride in 1,4-dioxane and re-purification by preparative RP-
HPLC (XBridge C18, gradient 5-95% acetonitrile/O.1% aq. ammonium hydroxide solution) afforded
10 13 mg (7% of th.) of the title nd.
LC—MS (method 2): R = 0.69 min; MS (ESIpos): m/z = 497 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): 8 = 8.00 (s, 1H), 7.38 (s, 1H), 7.30 (s, 1H), 6.84 (s, 1H), 4.54 (s,
2H), 4.08 (s, 2H), 3.95 (s, 3H), 3.79 (s, 2H), 2.99-2.89 (m, 4H), 2.73-2.63 (m, 4H), 2.44 (s, 3H)
15 Example 33
2— { [4-Amino(7-methoxy—5-methylbenzothiophen—2-yl)(piperazin— 1 hyl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—6-yl]methoxy} acetamide
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—140—
Intermediate 24A (200 mg, 327 umol) was treated with a 7 M solution of ammonia in methanol (10
ml) and stirred at rt overnight. The mixture was then combined with the reaction mixture of a 20 mg
test run, and the solvents were evaporated. The residue was treated with a 4 M solution of hydrogen
de in l,4-dioxane (2 ml) and stirred at rt for 2 h. Evaporation and subsequent ations by
preparative RP-HPLC (first Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. TFA; then
XBridge C18, nt 5-95% itrilefO.1% aq. ammonium hydoxide solution) afforded 5.5 mg
(3% of th.) of the title compound.
LC-MS (method 2): R. = 0.69 min; MS s): rn/z = 496 (M+H)+
10 1H-NMR (400 MHz, DMSO-da): 5 = 8.14-7.59 (br. s, 1H), 7.99 (s, 1H), 7.39 (s, 1H), 7.35-7.22
(m, 3H), 6.85 (s, 1H), 4.54 (s, 2H), 3.95 (s, 3H), 3.90 (s, 2H), 3.79 (s, 2H), 2.73-2.66 (m, 4H), 2.45
(s, 3H), 2.43-2.35 (m, 4H) ppm.
e 34
2-( {7- [(4-Acetylpiperazin— 1 -yl)methyl]amino(7-methoxymethyl-1 -benzothiophenyl)-
15 pyrrolo [2, l -f] [l ,2,4]triazin—6-yl}methoxy)acetamide
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—141—
A solution of Example 33 (105 mg, 68% purity, 144 umol) in THF/dichloromethane (125, 3.9 ml)
was d With sodium carbonate (179 mg, 1.6 mmol) and stirred at rt for 30 min. Acetyl chloride
(30 ul, 424 umol) was added, and the resulting mixture was stirred at rt for 30 min, then quenched
with methanol (2 ml) and evaporated. Purification by preparative C (Reprosil C18, gradient
10—95% acetonitrile/O.1% aq. formic acid) afforded 30 mg (85% purity, 34% of th.) of the title
compound.
LC-MS (method 5): R = 1.67 min; MS (ESIpos): m/z = 538 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): 5 = 7.99 (s, 1H), 7.40 (s, 1H), 7.33—7.19 (m, 3H), 6.85 (s, 1H),
10 4.55 (s, 2H), 3.96 (s, 5H), 3.80 (s, 2H), 3.43-3.36 (m, 4H), 2.47-2.38 (m, 7H), 1.97 (s, 3H) ppm.
Example 35
5—(7—Methoxymethylbenzothiophen-2—yl)—6—(phenoxymethyl)(piperazin— 1 hyl)pyrrolo—
[2,1-f] [1 ,2,4]triazinamine bis(f01miate)
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—142—
H30
0H X 2 HCOOH
A solution of Intermediate 23A (100 mg, 185 umol) in dichloromethane (2 ml) was treated with
thionyl chloride (27 pl, 371 umol). The e was stirred at rt for 15 min and then evaporated.
The residue was dissolved in THF (2 ml), treated with phenol (174 mg, 1.85 mmol) and DIPEA
(48 ul, 278 umol) and d at 70°C for 2 h. Further amounts of phenol (174 mg, 1.85 mmol) and
DIPEA (64 ul, 371 umol) were added, and ng was continued at 70°C overnight. After evapo-
ration, the residue was taken up in a 4 M solution of hydrogen chloride in 1,4-dioxane (2 ml) and
stirred at rt for 2 h. Evaporation and purification by preparative RP-HPLC (Reprosil C18, gradient
10—95% acetonitrile/0.1% aq. formic acid) ed 8 mg (8% of th.) of the title compound.
10 LC-MS (method 2): R = 0.84 min; MS (ESIpos): m/z = 515 (M+H)+
‘H-NMR (400 MHz, DMSO-ds): 8 = 8.26 (s, 2H), 8.02 (s, 1H), 7.36 (s, 1H), 7.30—7.22 (m, 3H),
6.99-6.89 (m, 3H), 6.81 (m, 1H), 5.04 (s, 2H), 3.93 (s, 5H), 2.78-2.71 (m, 4H), 2.42 (s, 3H) ppm.
Example 36
5-(7-Methoxymethylbenzothiophenyl)[(methylamino)methyl] (piperazinylmethyl)-
15 pyrrolo[2,1-f] [1,2,4]t1iazin—4-amine trihydrochloride
[Annotation] kirstena
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—143—
ediate 25A (150 mg, 279 umol) in THF (3 ml) was d with acetic acid (32 pl, 559 umol),
a 2 M solution of methylamine in THF (698 pl, 1.39 mmol) and sodium triacetoxyborohydride (296
mg, 1.39 mmol). The mixture was stirred at 60°C for 2 h and then evaporated. The residue was
dissolved in a 4 M solution of hydrogen de in 1,4-dioxane (1.87 ml) and stirred at rt for 2 h.
After evaporation, the e was purified by preparative RP-HPLC sil C18, gradient 10-
95% acetonitrile/O.1% aq. TFA). Lyophilization from a 4 M solution of hydrogen chloride in 1,4—
dioxane afforded 79 mg (49% of th.) of the title compound.
LC-MS (method 2): R = 0.56 min; MS (ESIpos): rn/z = 452 (M+H)+
10 lH-NMR (400 MHz, D20): 5 = 8.17 (s, 1H), 7.57 (s, 1H), 7.46 (s, 1H), 7.01 (s, 1H), 4.52 (s, 2H),
4.46 (s, 2H), 4.04 (s, 3H), 3.48-3.39 (m, 4H), 3.25-3.15 (m, 4H), 2.59 (s, 3H), 2.51 (s, 3H) ppm.
Example 37
6—[(Dimethylamino)methyl] (7-methoxy—5—methyl— 1 —benzothiophen—2-yl)(piperazin- 1 —ylmethyl)—
pyrrolo[2, 1 -f] [1 ,2,4]triazinamine trihydrochloride
[Annotation] kirstena
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—144—
A solution of Intermediate 25A (150 mg, 279 umol) in THF (3 ml) was treated with acetic acid
(32 pl, 559 umol), a 2 M on of ylamine in THF (698 pl, 1.39 mmol) and sodium triacetoxyborohydride
(296 mg, 1.39 mmol). The mixture was stirred at 60°C for 2 h and then evaporated.
The residue was dissolved in a 4 M solution of en chloride in 1,4-dioxane (1.88 ml) and
stirred at rt for 2 h. After evaporation, the residue was d by preparative RP-HPLC (Reprosil
C18, gradient 10-95% acetonitrile/0.1% aq. TFA). Lyophilization from a 4 M solution of hydrogen
chloride in 1,4-dioxane afforded 83 mg (50% of th.) of the title compound.
LC-MS (method 4): R. = 0.50 min; MS (ESIpos): m/z = 466 (M+H)+
10 ‘H-NMR (400 MHz, D20): 5 = 8.17 (s, 1H), 7.57 (s, 1H), 7.45 (s, 1H), 7.01 (s, 1H), 4.57 (s, 2H),
4.50 (s, 2H), 4.04 (s, 3H), 3.47-3.36 (m, 4H), 3.21-3.12 (m, 4H), 2.80 (s, 6H), 2.51 (s, 3H) ppm.
Example 38
6—[(Ethylamino)methyl] (7-methoxymethyl— 1 —benzothiophen—2-yl)(piperazinylmethyl)—
pyrrolo[2,1-f] [1,2,4]triazinamine trihydrochloride
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—145—
A solution of Intermediate 25A (60 mg, 111.8 umol) in THF (1 ml) was treated with a 2 M solution
of ethylamine in THF (83 ul, 167 umol), sodium triacetoxyborohydride (118 mg, 559 umol) and
acetic acid (83 ul, 167 umol). The mixture was stirred at 60°C for 90 min. Further amounts of 2 M
ethylamine solution (83 ul, 167 umol) and sodium triacetoxyborohydride (71 mg, 335 umol) were
added, and stirring at 60°C was ued for another 2 h. After evaporation, the residue was
ved in a 4 M solution of hydrogen chloride in 1,4—dioxane (3 ml) and stirred at rt overnight.
The mixture was evaporated, and the residue was purified by preparative RP-HPLC sil C18,
gradient 10-95% acetonitrile/0.1% aq. formic acid) and lyophilized from a 4 M solution of hydrogen
10 chloride in oxane. Re-purification by preparative RP-HPLC (Sunfire C18, 20% aceto-
nitrile/80% 0.02% aq. TFA) and re-lyophilization from a 4 M solution of en chloride in 1,4-
dioxane afforded 19 mg (29% of th.) of the title compound.
LC-MS (method 2): R = 0.56 min; MS (ESIpos): m/z = 466 (M+H)+
lH-NMR (400 MHz, D20): 5 = 8.14 (s, 1H), 7.56 (s, 1H), 7.45 (s, 1H), 7.01 (s, 1H), 4.45 (s, 4H),
15 4.04 (s, 3H), .32 (m, 4H), 3.18-3.05 (m, 4H), 2.99 (q, 2H), 2.51 (s, 3H), 1.10 (t, 3H) ppm.
Example 39
2—( { [4-Amino(7-methoxy—5-methylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—6-yl]methyl} amino)ethanol trihydrochloride
D
ation] kirstena
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-146—
A solution of Intermediate 25A (150 mg, 279 umol) in THF (3 ml) was treated with 2-aminoethanol
(84 ul, 1.39 mmol), sodium triacetoxyborohydride (296 mg, 1.39 mmol) and acetic acid (32 pl, 559
umol). The mixture was stirred at 60°C for 2 h and then evaporated. The residue was ved in a
4 M solution of hydrogen chloride in 1,4—dioxane (1.87 ml) and stirred at rt for 2 h. After
ation, the residue was purified by preparative RP-HPLC (Reprosil C18, gradient 10—95%
acetonitrile/0.1% aq. TFA). Lyophilization from a 4 M on of hydrogen chloride in 1,4—dioxane
afforded 140 mg (80% of th.) of the title compound.
LC-MS (method 2): R = 0.54 min; MS (ESIpos): m/z = 482 (M+H)+
10 1H-NMR (400 MHz, D20): 8 = 8.15 (s, 1H), 7.56 (s, 1H), 7.45 (s, 1H), 7.00 (s, 1H), 4.47 (s, 2H),
4.37 (s, 2H), 4.04 (s, 3H), 3.79-3.71 (m, 2H), 3.42-3.34 (m, 4H), 3.19-3.12 (m, 2H), 3.06—2.97 (m,
4H), 2.51 (s, 3H) ppm.
General Procedure for reductive amination reactions with Intermediate 25A (GPl):
A 0.1 M solution of Intermediate 25A in THF was d with 5 eq. of the respective amine com-
15 ponent, 5 eq. of sodium triacetoxyborohydride and 2 eq. of acetic acid. The resulting mixture was
stirred at 60°C for 2 h and then evaporated. A 0.15 M solution of the residue thus obtained in a 4 M
solution of hydrogen chloride in 1,4-dioxane was stirred at rt for 1-2 h. After evaporation, the
residue was purified as described below.
Example 40
20 rac— 1 — {[4-Amino(7-methoxy—5-methyl- 1 —benzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo—
at] [1 ,2,4]triazinyl]methyl}piperidinol trihydrochloride
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—147—
According to GPl, Intermediate 25A (150 mg, 279 umol) was reacted With 3-hydroxypiperidine
(141 mg, 1.39 mmol). Purification by preparative RP-HPLC (Reprosil C18, gradient 10-95% aceto-
nitrile/O.1% aq. TFA) and lyophilization from a 4 M solution of hydrogen chloride in 1,4-dioxane
afforded 178 mg (quant) of the title compound.
LC—MS (method 2): R: 0.54 min; MS s): m/z = 522 (M+H)+
lH-NMR (400 MHz, D20): 6 = 8.16 (s, 1H), 7.55 (s, 1H), 7.45 (s, 1H), 7.01 (s, 1H), 4.66-4.16 (m,
5H), 4.04 (s, 3H), 3.55-2.71 (m, 11H), 2.51 (s, 3H), 1.96-1.42 (m, 4H), .50 (m, 1H) ppm.
Example 41
10 1 - { no(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—6-yl]methyl}piperidin—4-ol trihydrochloride
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-148—
ing to GP], Intermediate 25A (150 mg, 279 umol) was reacted with 4-hydroxypiperidine
(141 mg, 1.39 mmol). Purification by preparative RP-HPLC (Reprosil C18, gradient 10—95% aceto-
nitrile/0.1% aq. TFA) and lization from a 4 M solution of en chloride in 1,4—dioxane
afforded 162 mg (91% of th.) of the title compound.
LC-MS (method 4): R1 = 0.48 min; MS (ESIpos): m/Z = 522 (M+H)+
lH-NMR (400 MHz, D20): 5 = 8.16 (s, 1H), 7.58 (br. s, 1H), 7.46 (s, 1H), 7.01 (s, 1H), 4.67—4.48
(m, 4H), 4.04 (s, 4H), 3.59-2.78 (m, 12H), 2.51 (s, 3H), 2.14-1.38 (m, 4H) ppm.
Example 42
rac— 1 - { [4-Amino(7-methoxy—5-methyl- 1 —benzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo-
10 [2,1 -f] [1 ,2,4]triazin—6-yl]methyl} pyrrolidin—3 —ol trihydrochloride
According to GPl, Intermediate 25A (150 mg, 279 umol) was reacted With 3-hydroxypyrrolidine
(113 111, 1.39 mmol). Purification by preparative RP-HPLC (Reprosil C18, gradient 10-95% aceto-
nitrile/0.1% aq. TFA) and lyophilization from a 4 M solution of hydrogen chloride in 1,4—dioxane
15 afforded 148 mg (85% of th.) of the title compound.
LC-MS (method 4): R = 0.46 min; MS (ESIpos): m/z = 508 (M+H)+
1H—NMR (400 MHz, D20): 5 = 8.18 (s, 1H), 7.58 (s, 1H), 7.46 (s, 1H), 7.01 (s, 1H), 4.71—4.30 (m,
5H), 4.04 (s, 3H), 3.70-2.95 (m, 12H), 2.51 (s, 3H), 2.32—2.14 (m, 1H), 2.03-1.87 (m, 1H) ppm.
D
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—149—
Example 43
6—[(Diethylamino)methyl] (7-methoxy—5—methylbenzothiophen—2-yl)(piperazin— 1 —ylmethyl)-
o[2,1-f] [1 ,2,4]triazin—4-arnine trihydrochloride
X3HC|
ing to GP1, Intermediate 25A (150 mg, 279 umol) was reacted With diethylamine (144 pl,
1.39 mmol). Purification by preparative RP—HPLC (Reprosil C18, gradient 10-95% acetonitrile/
01% aq. TFA) and lyophilization from a 4 M solution of hydrogen chloride in oxane afforded
12? mg (69% of th.) of the title compound.
LC-MS (method 2): R = 0.55 min; MS (ESIpos): m/z = 494 (M+H)+
10 1H-NMR (400 MHZ, D20): 8 = 8.19 (s, 1H), 7.61 (s, 1H), 7.47 (s, 1H), 7.01 (s, 1H), 4.59 (s, 2H),
4.51 (s, 2H), 4.04 (s, 3H), 3.47-3.35 (m, 4H), 3.29-3.00 (m, 8H), 2.51 (s, 3H), 1.07 (t, 6H) ppm.
Example 44
6-[(Cyclobutylamino)methyl] (7-methoxymethylbenzothiophenyl)(piperazin- 1 hyl
)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amjne trihydrochloride
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—150—
X3HC|
According to GPl, Intermediate 25A (150 mg, 279 umol) was reacted With cyclobutylamine (119 pl,
1.39 mmol). Purification by ative RP-HPLC sil C18, gradient 10-95% aceto-
nitrile/0.1% aq. TFA) and lyophilization from a 4 M solution of hydrogen chloride in oxane
5 afforded 127 mg (72% of th.) of the title compound.
LC—MS (method 2): R: 0.58 min; MS s): m/z = 492 (M+H)+
1H-NMR (400 MHZ, D20): 5 = 8.16 (s, 1H), 7.59 (s, 1H), 7.47 (s, 1H), 7.00 (s, 1H), 4.40 (s, 2H),
4.37 (s, 2H), 4.04 (s, 3H), 3.69-3.58 (m, 1H), 3.44-3.33 (m, 4H), 3.21-3.12 (m, 4H), 2.51 (s, 3H),
2.02-1.87 (m, 4H), 1.81-1.62 (m, 2H) ppm.
10 Example 45
5—(7-Methoxymethylbenzothiophen—2-yl)—7-(piperazin— 1 -ylmethyl)(pyrrolidin— 1 -ylmethyl)-
o[2,1-f] [1 ,2,4]triazin—4-amine trihydrochloride
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—151—
According to GP], Intermediate 25A (150 mg, 279 umol) was reacted with pyrrolidine (116 pl, 1.39
mmol). Purification by preparative RP—HPLC (Reprosil C18, gradient 10-95% acetonitrile/ 0.1% aq.
TFA) and lyophilization from a 4 M solution of hydrogen chloride in 1,4-dioxane ed 112 mg
(64% of th.) of the title compound.
LC-MS (method 2): R. = 0.54 min; MS (ESIpos): m/z = 492 (M+H)+
1H-NMR (400 MHz, D20): 8 = 8.19 (s, 1H), 7.60 (s, 1H), 7.46 (s, 1H), 7.01 (s, 1H), 4.70—4.61 (m,
4H), 4.04 (s, 3H), 3.55-3.40 (m, 6H), 3.35—3.26 (m, 4H), 3.02-2.87 (m, 2H), 2.51 (s, 3H), 1.97—
1.83 (m, 4H) ppm.
Example 46
10 6—[(Cyclopropylamino)methyl] (7-methoxy—5—methyl- 1 thiophen—2-yl)(piperazin— 1 —yl-
methyl)pyrrolo[2,1 -f] [1 ,2,4]triazin—4-amine trihydrochloride
According to GP], Intermediate 25A (200 mg, 372 umol) was reacted with cyclopropylamine
(129 pl, 1.86 mmol). Purification by preparative RP-HPLC (Reprosil C18, gradient 10—95% aceto-
15 nitrile/0.1% aq. TFA) and lization from a 4 M solution of hydrogen chloride in 1,4—dioxane
afforded 140 mg (62% of th.) of the title compound.
LC-MS (method 5): R. = 1.42 min; MS (ESIpos): m/z = 478 (M+H)+
1H—NMR (400 MHz, D20): 8 = 8.16 (s, 1H), 7.56 (s, 1H), 7.46 (s, 1H), 7.01 (s, 1H), 4.57 (s, 2H),
4.47 (s, 2H), 4.04 (s, 3H), 3.46-3.34 (m, 4H), 3.19—3.07 (m, 4H), 2.61-2.54 (m, 1H), 2.51 (s, 3H),
20 D-0.64 (m, 4H) ppm.
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—152—
Example 47
6— {[(Cyclopropylmethyl)amino]methyl} —5—(7—methoxymethylbenzothiophen—2-y1)—7—(piperazin—
1 —ylmethy1)pyrrolo [2, 1 -f] [1 ,2,4]triazin—4-amine trihydrochloride
According to GPl, Intermediate 25A (200 mg, 372 umol) was reacted With cyclopropylmethylamine
(161 pl, 1.86 mmol). Purification by preparative RP—HPLC (Reprosil C18, gradient 10—95%
acetonitrile/0.1% aq. TFA) and lyophilization from a 4 M solution of hydrogen chloride in 1,4-
e afforded 163 mg (69% of th.) of the title compound.
LC-MS d 2): R. = 0.60 min; MS (ESIpos): m/z = 492 (M+H)+
10 1H-NMR (400 MHZ, D20): 8 = 8.14 (s, 1H), 7.57 (s, 1H), 7.45 (s, 1H), 7.00 (s, 1H), 4.50 (s, 2H),
4.44 (s, 2H), 4.04 (s, 3H), 3.42-3.34 (m, 4H), 3.16-3.07 (m, 4H), 2.86 (d, 2H), 2.50 (s, 3H), 0.89-
0.76 (m, 1H), 0.55-0.45 (m, 2H), 0.23-0.14 (m, 2H) ppm.
Example 48
N— { [4-Amino(7-methoxymethyl— 1 —benzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo[2, 1 -fl -
15 [1 ,2,4]triazin—6-y1]methy1} e trihydrochloride
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—153—
X3HC|
A solution of Intermediate 25A (161 mg, 300 umol) in THF (3.2 ml) was treated with 2—aminoacetic
acid (112 mg, 1.5 mmol), sodium triacetoxyborohydride (317 mg, 1.5 mmol) and acetic acid (34 ul,
600 umol). The resulting mixture was stirred at 60°C for 2 h and then ated. The residue was
purified by preparative RP-HPLC sil C18, gradient 10-95% acetonitrile/O.l% aq. TFA). The
product thus obtained was ved in a 4 M solution of hydrogen chloride in 1,4-dioxane (2 ml)
and stirred at rt for 1 h. After evaporation, the residue was purified by preparative RP—HPLC
(Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. TFA). Subsequent lyophilization from a 4 M
on ofhydrogen chloride in 1,4-dioxane afforded 18 mg (9% of th.) of the title nd.
10 LC-MS (method 2): R = 0.63 min; MS (ESIpos): m/z = 496 (M+H)+
lH-NMR (400 MHz, D20): 5 = 8.14 (s, 1H), 7.54 (s, 1H), 7.45 (s, 1H), 6.99 (s, 1H), 4.42 (s, 2H),
4.36 (s, 2H), 4.03 (s, 3H), 3.64 (s, 2H), 3.42—3.33 (m, 4H), 3.07-2.96 (m, 4H), 2.50 (s, 3H) ppm.
Example 49
4- {[4-Amino(7-methoxy—5-methyl-1 thiopheny1)(piperazin-1 -ylmethyl)pyrrolo-
15 [2,1-t] [1 ,2,4]triazin—6-yl]methyl}piperazin—2—one trihydrochloride
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—154—
A solution of Intermediate 27A (220 mg, 354 umol) in a 4 M solution of hydrogen chloride in 1,4-
e (2 ml) was stirred at rt for 2 h. Then, the mixture was evaporated leaving 235 mg of the
crude product which was used in the next step without further purification.
5 LC—MS (method 4): R = 0.60 min; MS (ESIpos): m/z = 521 (M+H)+.
Example 50
[4—Amino(7-methoxymethyl- 1 —benzothiophen—2-yl)(morpholinylmethyl)pyrrolo—
[2, 1 -fl [1 ,2,4]triazin—6-yl]methanol
10 A solution of Intermediate 20A (500 mg, purity 87%, 1.28 mmol) and 4-methylenemorpholin—4-ium
de (347 mg, 2.56 mmol) in DMF (28 ml) was stirred at 70°C for 1.5 h. The mixture was
fled with ethyl acetate and washed with sat. aq. sodium hydrogencarbonate solution and sat. aq.
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—155—
sodium chloride solution. The organic layer was dried with magnesium sulfate and evaporated under
reduced pressure yielding 710 mg (purity 78%, 99% of th.) of the title compound.
LC-MS (method 2): R = 0.65 min; MS (ESIpos): m/z = 440 .
Example 51
(3S)-3 -( { [4-Amino(7-methoxy—5-methyl— 1 —benzothiophen—2-yl)(morpholin—4-ylmethyl)—
o[2,1 -f] [1 ,2,4]triazin—6-yl]methyl} amino)pyrrolidin—2-one
A solution of Intermediate 33A (65 mg, 149 umol) in methanol (2 ml) was treated with (3S)
aminopyrrolidin—2-one (45 mg, 446 umol), sodium cyanoborohydride (47 mg, 743 umol) and acetic
10 acid (26 pl, 446 umol). After stirring at 60°C for 16 h, the resulting mixture was separated by
ative RP-HPLC (Reprosil C18, gradient 20-40% acetonitrile/0.2% aq. TFA). The t
thus obtained was dissolved in ol and filtered through an anion exchange cartridge (Strato-
spheres SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was eva—
porated yielding 49 mg (63% of th.) of the title nd.
15 LC-MS (method 2): R = 0.71 min; MS (ESIpos): m/z = 522 (M+H)+
1H-NMR (400 MHz, DMSO-da): 5 = 7.96 (s, 1H), 7.66 (s, 1H), 7.5-8.1 (br. s, 1H), 7.44 (s, 1H),
7.31 (s, 1H), 6.84 (s, 1H), 5.4-6.0 (br. s, 1H), 3.95 (s, 3H), 3.91 (s, 2H), 3.75 (d, 2H), 3.50-3.66
(m, 4H), 3.06-3.19 (m, 3H), 2.94-3.05 (m, 1H), 2.61 (t, 1H), 2.45 (t, 3H), 2.38-2.44 (m, 4H), 1.89-
1.99 (m, 1H), 1.49-1.60 (m, 1H) ppm.
D
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—156—
Example 52
4— { [4-Amino(7-methoxymethylbenzothi0phen—2-yl)(morpholin—4-ylmethyl)pyrrolo—
[2,1 -1] [1 ,2,4]triazin—6-yl]methyl}piperazin—2—one
5 A solution of Intermediate 33A (65 mg, 149 umol) in methanol (2 ml) was treated with 2—oxo-
piperazine (45 mg, 446 umol), sodium cyanoborohydride (47 mg, 743 umol) and acetic acid (26 ul,
446 umol). After stirring at 60°C for 16 h, the resulting mixture was separated by ative RP-
HPLC (Reprosil C18, nt 20-40% acetonitrile/0.2% aq. TFA). The product thus obtained was
dissolved in methanol and d through an anion exchange cartridge (Stratospheres SPE, PL-
10 HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was evaporated ng
41 mg (53% of th.) of the title compound.
LC-MS (method 2): R = 0.70 min; MS (ESIpos): m/z = 522 (M+H)+
lH-NMR (400 MHz, DMSO-ds): 8 = 7.97 (s, 1H), 7.67 (br. s, 1H), 7.55-8.05 (br. s, 1H), 7.38 (s,
1H), 7.30 (s, 1H), 6.84 (s, 1H), 5.29-5.88 (br. s, 1H), 3.95 (s, 3H), 3.92 (s, 2H), 3.58 (s, 2H), 3.51-
15 3.56 (m, 4H), 3.00-3.06 (m, 2H), 2.85 (s, 2H), 2.45 (s, 3H), 2.43-2.48 (m, 5H) ppm.
Example 53
rac— 1 -( { no(7-methoxymethylbenzothiophen—2-yl)(morpholin—4-y1methyl)pyrrolo-
[2,1 -f] [1 ,2,4]triazin—6-yl]methyl} amino)propanol
D
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—157—
A solution of Intermediate 33A (64 mg, 146 umol) in methanol (2 ml) was treated with rac—l—amino-
propan—2-ol (33 mg, 439 umol), sodium cyanoborohydride (46 mg, 731 umol) and acetic acid (25
u], 439 umol). After stirring at 60°C for 16 h, the resulting mixture was separated by preparative
RP-HPLC (Reprosil C18, gradient 20-40% acetonitrile/O.2% aq. TFA). The product thus obtained
was dissolved in methanol and filtered through an anion exchange dge (Stratospheres SPE, PL-
HC03 MP—resin). The cartridge was eluted with methanol, and the e was ated yielding
42 mg (57% of th.) of the title compound.
LC-MS (method 5): R = 1.63 min; MS (ESIpos): m/z = 497 (M+H)+
10 ‘H-NMR (400 MHz, DMSO-ds): 6 = 7.96 (s, 1H), 7.47—7.92 (br. s, 1H), 7.39 (s, 1H), 7.30 (s, 1H),
6.84 (s, 1H), 5.36-5.92 (br. s, 1H), 4.36 (d, 1H), 3.95 (s, 3H), 3.90 (s, 2H), 3.64-3.75 (1n, 2H),
3.49—3.61 (m, 5H), 2.45 (s, 3H), 2.39—2.47 (1n, 4H), 2.31-2.38 (m, 2H), 0.97 (d, 3H) ppm.
Example 54
1 -( { [4-Amino(7-methoxymethyl-1 -benzothiopheny1)(morpholinylmethyl)pyrrolo-
15 [2,1-1] [1 ,2,4]triazin—6-yl]methyl} amino)—2—methylpropan—2-ol
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—158—
A solution of Intermediate 33A (80 mg, 183 umol) in methanol (2 ml) was treated with 1—amino
propan—2-ol (34 mg, 274 umol), sodium cyanoborohydride (57 mg, 914 umol) and acetic acid
(21 pl, 366 umol). After stirring at 60°C for 16 h, the resulting mixture was separated by pre-
parative RP-HPLC (Reprosil C18, gradient 20-40% itrile/O.2% aq. TFA). The product thus
obtained was ved in methanol and filtered through an anion ge cartridge (Stratospheres
SPE, PL—HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was evaporated
yielding 29 mg (31% of th.) of the title compound.
LC-MS (method 2): R = 0.65 min; MS (ESIpos): m/z = 511 (M+H)+
10 ‘H-NMR (400 MHz, DMSO-ds): 5 = 7.96 (s, 1H), 7.50-8.02 (br. s, 1H), 7.42 (s, 1H), 7.28 (s, 1H),
6.84 (s, 1H), 5.4-6.0 (br. s, 1H), 4.11 (s, 1H), 3.95 (s, 3H), 3.90 (s, 2H), 3.70 (d, 2H), 3.51-3.58
(m, 4H), 2.45 (s, 3H), 2.39-2.46 (m, 4H), 2.33 (d, 2H), 1.83-1.92 (m, 1H), 1.03 (s, 6H) ppm.
Example 55
1 -(4- {[4-Amino(hydroxymethyl)(7-methoxymethy1benzothiophenyl)pyrr010[2, 1 -f] -
15 [1 ,2,4] triazin—7-yl]methyl}piperazin— 1 —yl)e1:han0ne
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—159—
A solution of Intermediate 20A (345 mg, 1.01 mmol) in acetic acid (5 ml) was treated with 37% aq.
formaldehyde solution (91 ul, 1.22 mmol) and l-acetylpiperazine (160 mg, 1.22 mmol). The mixture
was stirred at 60°C for 6 h and then ated. The residue was dissolved in a mixture ofTHF/l M
aq. lithium hydroxide solution (1:1, 10 ml) and stirred at rt for 2 h. The mixture was then combined
with the reaction mixture of a 100 mg test run, and sat. aq. ammonium de solution was added.
The mixture was ted with ethyl acetate, and the c phase was washed with sat. aq.
sodium chloride solution, dried over magnesium sulfate and evaporated under d pressure
yielding 678 mg (purity 87%, 94% of th.) of the title nd.
10 LC-MS (method 2): R. = 0.71 min; MS (ESIpos): m/z = 481 (M+H)+.
Example 56
(3R)—3 - [( {7- [(4-Acetylpiperazin— 1 -yl)methyl]—4—amino(7-methoxy—5-methylbenzothiophen—
2—yl)pyrrolo[2,1-f] [1 ,2,4]triazin—6-yl} methyl)amino]pyrrolidin—2-one
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—l60—
NH
CH3
A solution of Intermediate 31A (80 mg, 167 umol) in methanol (1.4 ml) was treated with (3R)
aminopyrrolidin—2-one (21 mg, 251 umol), sodium cyanoborohydride (52 mg, 836 umol) and acetic
acid (19 pl, 334 umol). After stirring at 60°C for 16 h, the resulting mixture was separated by pre-
parative RP-HPLC (Reprosil C18, gradient 20—40% acetonitrile/0.2% aq. TFA). The product thus
obtained was dissolved in ol and filtered through an anion exchange cartridge (Stratospheres
SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was evaporated
yielding 46 mg (49% of th.) of the title nd.
LC-MS d 2): R. = 0.70 min; MS (ESIpos): m/z = 563 (M+H)+
10 1H-NMR (400 MHz, DMSO-da): 5 = 8.42 (s, 1H), 8.05 (s, 1H), 7.93-8.24 (br. s, 1H), 7.51 (s, 1H),
7.34 (s, 1H), 6.88 (s, 1H), .07 (br. s, 1H), 4.21-4.37 (m, 2H), 4.19 (s, 2H), 4.10 (t, 1H), 3.96
(s, 3H), 3.56-3.66 (m, 2H), 3.44-3.54 (m, 4H), .27 (m, 4H), 2.47 (s, 4H), 2.16-2.25 (m, 1H),
2.00 (s, 3H), 1.86-1.95 (m, 1H) ppm.
e 57
15 1 —(4- {[4-Amino {[(2-hydroxymethylpr0pyl)amino]methyl} (7-methoxymethyl— 1 —benzo-
thiophen—2-yl)pyrrolo[2, 1 -f] [1 ,2,4]triazin—7—yl]methyl}piperazin— 1 -yl)ethanone
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—161—
A on of Intermediate 31A (80 mg, 183 umol) in methanol (2 ml) was treated with 1—amino
methylpropan—2-ol (31 mg, 251 umol), sodium cyanoborohydride (53 mg, 836 umol) and acetic acid
(19 ul, 334 umol). After stirring at 60°C for 16 h, the resulting mixture was separated by pre-
5 parative RP-HPLC (Reprosil C18, nt 20—40% acetonitrile/O.2% aq. TFA). The product thus
obtained was dissolved in methanol and filtered through an anion exchange cartridge (Stratospheres
SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was evaporated
yielding 29 mg (31% of th.) of the title compound.
LC-MS (method 2): R = 0.71 min; MS (ESIpos): m/z = 552 (M+H)+
10 ‘H-NMR (400 MHz, DMSO-ds): 5 = 7.96 (s, 1H), 7.59-8.02 (br. s, 1H), 7.42 (s, 1H), 7.28 (s, 1H),
6.84 (s, 1H), 5.45—5.93 (br. s, 1H), 4.13 (br. s, 1H), 3.95 (s, 3H), 3.93 (s, 2H), 3.71 (s, 2H), 3.37—
3.44 (m, 4H), 2.45 (s, 3H), 2.32—2.43 (m, 6H), 1.97 (s, 3H), 1.03 (s, 6H) ppm.
Example 58
4—( {4-Amino(7-meth0xymethyl— 1 —benzothiophen—2-yl) [(3 -0xopiperazin— 1 —yl)methyl]pyrrolo-
15 [2, 1 -t] [1 ,2,4]triazin—7-yl}methyl)piperazine— 1 —carbaldehyde formiate
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—162—
X HCOOH
Acetic acid anhydride (498 ul, 5.17 mmol) and formic acid (237 pl, 6.28 mmol) were stirred first 2 h
at 50°C and then overnight at rt. uently, the mixture was diluted with dichloromethane
(5.1 ml), and 1.16 ml of this solution were added to a solution of Example 49 (233 mg, 370 umol) in
pyridine (89 ul). After stirring at rt for 2 h, the mixture was diluted with methanol and then eva-
porated. The residue was purified by ative RP—HPLC (Reprosil C18, nt 10—95% aceto—
nitrile/O. 1% aq. formic acid) affording 77 mg (35% of th.) of title compound.
LC—MS (method 4): R. = 0.62 min; MS (ESIpos): m/z = 549 (M+H)+
1H-NMR (400 MHz, DMSO-ds): inter al. 8 = 8.14 (s, 1H), 7.97 (s, 2H), 7.67 (s, 1H), 7.38 (s, 1H),
10 7.30 (s, 1H), 6.84 (s, 1H), 3.96 (s, 2H), 3.95 (s, 3H), 3.58 (s, 2H), 3.04 (br. t, 2H), 2.86 (s, 2H),
2.45 (s, 3H), 2.42 (br. t, 2H) ppm.
Example 59
4-( {7- [(4-Acetylpiperazin— 1 -yl)methyl] amino(7-methoxymethylbenzothiophenyl)-
pyrrolo[2,1-f] [1 ,2,4]triazinyl}methyl)piperazin—2-one
[Annotation] na
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—163—
A suspension of Example 49 (310 mg, 522 umol) in dichloromethane/THF (2.5:1, 9.64 ml) was
treated with sodium carbonate (442 mg, 4.17 mmol) and stirred at rt for 30 min. Acetyl chloride (74
ul, 1.04 mmol) was added, and the resulting mixture was stirred at rt for 2 h. After quenching with
methanol, the mixture was evaporated, and the residue was purified by preparative RP—HPLC
sil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) affording 133 mg (45% of th.) of
the title compound.
LC—MS (method 2): R. = 0.69 min; MS (ESIpos): m/z = 563 (M+H)+
1H-NMR (400 MHz, methanol-d4): 5 = 7.89 (s, 1H), 7.30 (s, 1H), 7.28 (s, 1H), 6.79 (s, 1H), 4.13
10 (s, 2H), 3.98 (s, 3H), 3.74 (s, 2H), 3.59 (t, 2H), 3.54 (t, 2H), 3.18 (t, 2H), 3.02 (s, 2H), 2.68-2.55
(m, 6H), 2.48 (s, 3H), 2.08 (s, 3H) ppm.
Example 60
Methyl 4-amino(7-methoxy—5-methylbenzothiophenyl)(piperazinylcarbonyl)pyrrolo-
[2,1-f][1,2,4]t1iazinecarboxylate bis(formiate)
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—164-
X 2 HCOOH
To a solution of Intermediate 28A (15 mg, 26 umol) in a thanol mixture (5:1, 180 pl),
cooled to 0°C, was added (trimethylsilyl)diazomethane (2 M solution in hexane, 15 pl, 32 umol).
The resulting mixture was slowly warmed to rt over 30 min and then evaporated. The residue was
dissolved in a 4 M solution of hydrogen chloride in 1,4-dioxane (0.5 ml) and stirred at rt for 1 h.
After ation, the residue was purified by preparative C (Reprosil C18, gradient 10-
95% itrile/0.1% aq. formic acid) affording 4.8 mg (35% of th.) of the title nd.
LC—MS (method 2): Rt = 0.66 min; MS (ESIpos): m/z = 481 (M+H)+
1H-NMR (400 MHz, DMSO-ds): inter a]. 8 = 8.17 (s, 2H), 8.38-8.23 (br. s, 1H), 8.04 (s, 1H), 7.43
10 (s, 1H), 7.31 (s, 1H), 6.86 (s, 1H), 5.71-5.58 (br. s, 1H), 3.96 (s, 3H), 3.60 (s, 3H, overlap with
water peak), 2.46 (s, 3H) ppm.
Example 61
5—(7—Methoxy—5-methylbenzothiophen-2—yl)—6—(1 ,3 —oxazolyl)(piperazinylmethyl)pyrrolo—
[2,1-f] [1,2,4]triazin—4-amine trihydrochloride
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—l65—
A solution of Intermediate 25A (100 mg, 0.19 mmol) in methanol (3.33 ml) was treated with
(4-toluenesulfonyl)methylisocyanide (36 mg, 0.19 mmol) and potassium carbonate (25 mg, 186
umol). The mixture was refluxed for 6 h. It was then ed with the ons mixtures from
three 30 mg test runs and evaporated. The residue was dissolved in a 4 M solution of hydrogen
chloride in 1,4-dioxane (10 ml) and stirred at rt for 2 h. After evaporation, the residue was purified
by two—fold preparative RP-HPLC (Reprosil C18, nt 10-95% acetonitrile/O.1% aq. TFA).
Further purification by column chromatography on silica gel (dichloromethane/methanol 5:1 with
0.5% aq. ammonia) and lyophilization from a 4 M solution of hydrogen chloride in 1,4—dioxane
10 afforded 75 mg (34% of th.) of the title compound.
LC—MS (method 4): R. = 0.69 min; MS (ESIpos): m/z = 476 (M+H)+
1H-NMR (400 MHz, DMSO-ds): inter al. 8 = 8.40 (s, 1H), 8.20 (s, 1H), 7.46 (s, 1H), 7.35 (s, 1H),
6.96 (s, 1H), 6.89 (s, 1H), 3.95 (s, 3H), 2.46 (s, 3H) ppm.
Example 62
15 6—(Aminomethyl)(7-methoxy—5-methyl— 1 thiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo-
[2, l -f] [l ,2,4]triazin—4-amine trihydrochloride
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—166—
X3HC|
A suspension of Intermediate 29A (76 mg, 134 umol) and 10% Pd/C (60 mg) in a 0.5 M solution of
hydrogen chloride in methanol (20 ml) was stirred at rt for 3 h under 1 atm of hydrogen. The mixture
was then filtered through kieselguhr, the filtrate was evaporated, and the residue was purified by
preparative RP-HPLC (Reprosil C18, nt 10-95% acetonitrile/0.1% aq. TFA). The product
thus obtained was lyophilized from a 4 M solution of hydrogen chloride in 1,4-dioxane affording 34
mg (46% of th.) of the title compound.
LC—MS (method 2): R = 0.55 min; MS (ESIpos): m/z = 438 (M+H)+
1H-NMR (400 MHz, DMSO-da): inter al. 8 = 8.24 (br. s, 3H), 8.12 (s, 1H), 7.52 (s, 1H), "L34 (s,
10 1H), 6.89 (s, 1H), 3.96 (s, 3H), 3.76-3.63 (m, 1H), 3.52-3.42 (m, 1H), 2.47 (s, 3H) ppm.
Example 63
N— { [4—Amino(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo—
[2, 1 —f] [1 ,2,4]triazin—6-yl]methyl} ide bis(trifluoroacetate)
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—167—
H30
[CH3
0
CH3
N / / \<
K ,N / O
x 2 CFscOOH
N/\\
\\/NH
A solution of Intermediate 30A (210 mg, 362 umol) in dichloromethane (26 ml) was treated With
trifluoroacetic acid (5.2 ml) and stirred at rt for 1 h. After evaporation at rt, the residue was purified
by preparative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. TFA) affording 163
mg (63% of th.) of the title compound.
LC—MS (method 3): R: 2.42 min; MS (ESIpos): m/z = 480 (M+H)+
1H-NMR (400 MHz, DMSO-ds): inter a]. 8 = .75 (br. s, 1H), 8.30-8.16 (br. s, 1H), 8.08 (s,
1H), 7.38 (s, 1H), 7.33 (s, 1H), 6.87 (s, 1H), 4.32 (br. d, 2H), 3.96 (s, 3H), 3.40-2.98 (m, 8H), 2.46
(s, 3H), 1.77 (s, 3H) ppm.
10 Example 64
N— { [4-Amino(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo—
[2, 1 —f] [1 ,2,4]triazin—6-yl]methyl} acetamide dihydrochloride
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—168—
A solution of Intermediate 30A (80 mg, 0.14 mmol) in dichloromethane (10 ml) and trifluoroacetic
acid (2 ml) was stirred at rt for 1 h and then evaporated. Purification by preparative RP—HPLC
(Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) and lyophilization from a mixture
ofmethanol and 4 M solution of hydrogen chloride in oxane afforded 39 mg (50% of th.) of the
title compound.
LC-MS (method 5): R = 1.56 min; MS (ESIpos): m/z = 480 (M+H)+
1H-NMR (400 MHz, DMSO-da): inter al. 8 = 8.12 (s, 1H), 7.38 (s, 1H), 7.33 (s, 1H), 6.87 (s, 1H),
4.37 (br. d, 2H), 3.96 (s, 3H), 3.85-3.20 (m, 8H, overlap with water peak), 2.46 (s, 3H), 1.76 (s,
3H) ppm.
10 Example 65
N-( {4-Amino [(4-formylpiperazin— 1 -yl)methyl](7-methoxy—5-methylbenzothiophen—2-yl)-
o [2, 1 -f] [1 ,2,4]triazin—6-yl}methyl)acetamide formiate
Acetic acid anhydride (304 pl, 3.16 mmol) and formic acid (145 pl, 3.16 mmol) were stirred first 2 h
15 at 50°C and then overnight at rt. Subsequently, the mixture was diluted with dichloromethane
(3.1 ml), and 663 pl of this on were added to a solution of Example 63 (160 mg, 226 umol) in
pyridine (54 ul). The e was d at rt for 2 h, then diluted with methanol (1 ml), and stirring
was continued at 40°C for another 2 h. After evaporation, the residue was purified by preparative
RP—HPLC sil C18, gradient 10-95% itrile/0.1% aq. formic acid) affording 74 mg (61%
20 of th.) of title compound.
EMS (method 4): R = 0.65 min; MS (ESIpos): m/z = 508 (M+H)+
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—169—
‘H-NMR (400 MHz, DMSO-ds): 5 = 8.13 (s, 1H), 8.06-7.89 (m, 3H), 7.38 (s, 1H), 7.31 (s, 1H),
6.85 (s, 1H), 4.28 (d, 2H), 4.01-3.88 (m, 5H), 2.47—2.34 (m, 7H), 1.75 (s, 3H) ppm.
Example 66
N-( {7- [(4-Acetylpiperazin— 1 -yl)methyl] amino(7-methoxymethylbenzothiophen—2-yl)-
5 o[2, 1 -f] [1 ,2,4]triazin—6-yl} methyl)acetamide
A solution of Example 63 (110 mg, 229 umol) and acetyl chloride (32 pl, 458 umol) in THF/
dichloromethane (1 :2, 3 ml) was treated with sodium ate (194 mg, 1.83 mmol) and stirred at
rt overnight. Then, the mixture was diluted with methanol (2 ml) and water (1 ml) and stirred at rt
10 for 1 h. After evaporation, the residue was purified by preparative RP-HPLC (Reprosil C18, gra-
dient 10-95% acetonitrile/0.1% aq. formic acid). Lyophilization from 1,4-dioxane and re-purification
by column chromatography on silica gel (dichloromethane/methanol 50:1 —> 100% ol) affor-
ded 35 mg (28% of th.) of the title compound.
LC—MS (method 2): R: = 0.70 min; MS (ESIpos): m/z = 522 (M+H)+
15 1H-NMR (400 MHz, a): 5 = .98 (m, 2H), 7.38 (s, 1H), 7.31 (s, 1H), 6.85 (s, 1H),
4.27 (d, 2H), 3.95 (s, 3H), 3.91 (s, 2H), 3.44—3.36 (m, 4H), 2.48-2.35 (m, 7H), 1.98 (s, 3H), 1.75
(s, 3H) ppm.
Example 67
— 4—Amino(7-methoxymethylbenzothiophen—2—yl) [(3 -oxopiperazin— 1 -yl)methyl]—
20 lo[2, l-f] [1,2,4]triaziny1}methyl)acetamide
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—170—
A suspension of ediate 32A (35 mg, 73 umol) in methanol (4.1 ml) was treated with acetic
anhydride (13 pl, 146 umol) and 10% Pd/C (41 mg) and stirred at rt for 1 h under 1 atm of hydro-
gen. Filtration over kieselguhr and evaporation of the filtrate afforded 30 mg (79% of th.) of the title
5 compound.
LC-MS d 5): R: = 1.65 min; MS (ESIpos): m/z = 494 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.99 (s, 2H), 7.75 (br. s, 1H), 7.39 (s, 1H), 7.31 (s, 1H), 6.85
(s, 1H), 4.27 (s, 1H), 4.26 (s, 1H), 3.95 (s, 5H), .08 (m, 2H), 3.05-2.96 (m, 2H), 2.66-2.57
(m, 2H), 2.45 (s, 3H), 1.72 (s, 3H) ppm.
10 Example 68
4—Amino(hydroxymethyl)(7-methoxy—5—methylbenzothiophen—2-yl)pyrrolo[2, 1 -f] [1 ,2,4] —
triazine—7—carbonitrile
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—l71—
A solution of Intermediate 38A (1 g, 2.08 mmol) in THF (10 n11) was treated with a 1 M solution of
tetra-n-butylammonium fluoride in THF (12 ml, 12 mmol). The mixture was d at rt overnight
and then evaporated. The residue was taken up in water and extracted three times with ethyl acetate.
The combined organic phases were dried over ium sulfate and evaporated. The residue was
triturated in tert—butyl methyl ether, and the solid was filtered off affording 680 mg (78% of th.) of
the title compound.
LC—MS (method 2): R. = 0.95 min; MS (ESIpos): m/z = 366 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 6 = 8.61-8.29 (br. s, 1H), 8.18 (s, 1H), 7.43 (s, 1H), 7.32 (s, 1H),
6.87 (s, 1H), 6.32-6.03 (br. s, 1H), 5.46 (t, 1H), 4.55 (d, 2H), 3.96 (s, 3H), 2.45 (s, 3H) ppm.
10 Example 69
4-Amino(methoxymethyl)(7-methoxy—5—methylbenzothiophen—2-yl)pyrrolo [2, 1 -f] [1 ,2,4] -
triazinecarbonitrile
A solution of Example 68 (60 mg, 164 umol) in dichloromethane (5 ml) was treated with thionyl
15 chloride (18 ul, 246 umol). The mixture was stirred at rt for 15 min and then evaporated. The resi-
due was dissolved in methanol (2 ml) and treated with DIPEA (57 pl, 328 umol). The mixture was
stirred first 2 h at 60°C, then refluxed overnight and finally heated to 150°C for 30 min in a micro-
wave device. After this, the mixture was evaporated, and the residue was purified by preparative RP-
HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. TFA). The product thus obtained was
20 dissolved in methanol and filtered h an anion exchange cartridge (Stratospheres SPE, PL-
HC03 in). The cartridge was eluted with methanol, and the filtrate was evaporated affording
18 mg (28% of th.) of the title compound.
D
LC—MS (method 4): R. = 1.12 min; MS (ESIpos): m/z = 379 (M+H)+
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—172—
‘H-NMR (400 MHz, DMSO-ds): 5 = 8.61-8.40 (br. s, 1H), 8.21 (s, 1H), 7.42 (s, 1H), 7.33 (s, 1H),
6.8? (s, 1H), 6.34-6.09 (br. s, 1H), 4.47 (s, 2H), 3.96 (s, 3H), 3.26 (s, 3H), 2.45 (s, 3H) ppm.
Example 70
4-Amino(ethoxymethyl)(7-methoxymethylbenzothiophen—2-yl)pyrrolo[2, 1 -f] [1,2,4]-
triazinecarbonitrile
A solution of e 68 (60 mg, 164 umol) in dichloromethane (5 ml) was treated with thionyl
chloride (18 pl, 246 umol). The mixture was stirred at It for 15 min and then evaporated. The resi-
due was dissolved in ethanol (2 ml) and treated with DIPEA (57 pl, 328 umol). The mixture was
10 stirred at 60°C overnight and then heated to 150°C for 30 min in a microwave device. After this, the
mixture was evaporated, and the residue was d by ative C (Reprosil C18,
gradient 10-95% acetonitrile/0.1% aq. TFA). The product thus obtained was dissolved in ethanol
(2 ml) and again heated to 150°C for 30 min in the microwave oven. DIPEA (57 ul, 328 umol) was
added, and heating to 150°C in the microwave oven was continued for further 30 min. After eva-
15 poration, the residue was purified by column chromatography on silica gel (dichloromethane/
methanol 95:5) affording 16 mg (23% ofth.) of the title nd.
LC—MS (method 2): R = 1.18 min; MS s): rn/Z = 393 (M+H)+
1H-NMR (400 MHz, DMSO-da): 5 = 8.61-8.38 (br. s, 1H), 8.20 (s, 1H), 7.42 (s, 1H), 7.33 (s, 1H),
6.87 (s, 1H), 6.33-6.08 (br. s, 1H), 4.51 (s, 2H), 3.96 (s, 3H), 3.45 (q, 2H), 2.45 (s, 3H), 1.10 (t,
20 3H) ppm.
D
ation] na
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—173—
Example 71
4—Amino(7-methoxymethylbenzothiophen—2-yl) [(3 -oxopiperazin— 1 -y1)methy1]pyrrolo [2, 1 -
f][1,2,4]triazinecarbonitri1e
A solution of Intermediate 39A (20 mg, 55 umol) in THF (0.73 ml) was treated with acetic acid
(6 pl, 110 umol), 2-oxopiperazine (27 mg, 275 umol) and sodium triacetoxyborohydride (58 mg,
275 umol). After stirring at rt for 3 h, further amounts of THF (1 ml), acetic acid (6 u], 110 umol),
2-0xopiperazine (27 mg, 275 umol) and sodium triacetoxyborohydride (58 mg, 275 umol) were
added, and stirring at rt was continued overnight. After evaporation, the residue was purified by pre-
10 parative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/O.1% aq. TFA). The product thus
obtained was dissolved in methanol and filtered through an anion exchange cartridge ospheres
SPE, PL-HC03 MP-resin). The dge was eluted with methanol, and the filtrate was evaporated
affording 13 mg (52% of th.) of the title compound.
LC-MS d 2): R = 0.86 min; MS (ESIpos): m/z = 447 (M+H)+
15 1H-NMR (400 MHz, DMSO-ds): 5 = 8.60—8.31 (br. s, 1H), 8.19 (s, 1H), 7.74 (s, 1H), 7.44 (s, 1H),
7.33 (s, 1H), 6.87 (s, 1H), 6.25-5.98 (br. s, 1H), 3.96 (s, 3H), 3.62 (s, 2H), 3.13-3.07 (m, 2H), 2.91
(s, 2H), 2.45 (s, 3H) ppm.
Example 72
N,N’— {[4-Amino(7-methoxymethy1— 1 —benzothiophen—2-y1)pyrrolo[2,1 -f] [1 ,2,4]triazine—
20 6,7—diyl]bis(methylene) } diacetamide
D
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—174—
A suspension of Intermediate 40A (crude, 85 mg), 10% Pd/C (115 mg) and acetic ide (40 ul,
435 umol) in methanol (12 ml) was stirred at rt under 1 atm of hydrogen. After 4 h, further s
of 10% Pd/C (115 mg) and acetic anhydride (40 ul, 435 umol) were added, and stirring at rt under 1
atm of hydrogen was continued for 2 h. The resulting mixture was filtered through kieselguhr, the
filtrate was evaporated, and the residue was purified by preparative RP-HPLC (Reprosil C18,
gradient 10-95% acetonitrile/0.1% aq. TFA). The product thus obtained was dissolved in methanol
and filtered h an anion exchange cartridge (Stratospheres SPE, PL-HC03 MP—resin). The
cartridge was eluted with methanol, and the filtrate was evaporated affording 18 mg (18% of th.) of
10 the title compound.
LC-MS (method 2): R. = 0.73 min; MS (ESIpos): m/z = 452 (M+H)+
1H-NMR (400 MHz, DMSO-da): 8 = 8.29 (br. t, 1H), 8.04 (br. t, 1H), 8.00 (s, 1H), 7.34 (s, 1H),
7.31 (s, 1H), 6.85 (s, 1H), 4.58 (d, 2H), 4.26 (d, 2H), 3.95 (s, 3H), 2.45 (s, 3H), 1.81 (s, 3H), 1.74
(s, 3H) ppm.
15 Example 73
2— [4-Amino(hydroxymethyl)(7-methoxy—5—methylbenzothiophen—2-yl)pyrrolo [2, 1 —f] [1 ,2,4] -
triazin—7-yl]propan—2-ol
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—175—
A flask containing a suspension of Intermediate 43A (180 mg, 598 umol), Intermediate 6A (299 mg,
897 umol) and caesium fluoride (454 mg, 2.99 mmol) in THF/water (10:1, 11 ml) was degassed
under d pressure and then refilled with argon. 4-(Di-tert—butylphosphino)-N,N-
dimethylaniline-dichloropalladium (2:1; 13 mg, 18 umol) was added. The resulting mixture was
degassed again and stirred under argon at 50°C for 16 h. After this, the reaction mixture was sepa-
rated by preparative RP-HPLC (Reprosil C18, gradient 30-50% acetonitrile/O.2% aq. TFA). The
t fractions were diluted with a 7 M solution of ammonia in methanol and then concentrated
under reduced pressure. The precipitate was d off, washed with water and dried in vacuo
10 yielding 99 mg (42% of th.) of the title compound.
LC-MS (method 2): R = 0.89 min; MS (ESIpos): m/z = 399 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 7.96 (s, 1H), 7.51-8.02 (br. s, 1H), 7.37 (s, 1H), 7.31 (s, 1H),
6.86 (s, 1H), 5.99 (s, 1H), 5.23-5.82 (br. s, 1H), 5.04 (t, 1H), 4.53 (d, 2H), 3.96 (s, 3H), 2.45 (s,
3H), 1.73 (s, 6H) ppm.
15 Example 74
4— { [4-Amino(2-hydroxypropan—2-yl)-5—(7—methoxymethylbenzothiophen—2-yl)pyrrolo—
[2,1 -f] [1 ,2,4]triazin—6-yl]methyl}piperazin—2—one
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-176—
A solution of Intermediate 44A (50 mg, 73% purity, 92 umol) in methanol (4 ml) was treated with
2—oxopiperazine (28 mg, 276 umol), sodium cyanoborohydride (23 mg, 368 umol) and acetic acid
(21 pl, 368 umol). The mixture was stirred first 18 h at 60°C and then 3 days at rt. After this, the
e was separated by preparative C (Reprosil C18, gradient 20-40% acetonitrile/0.2%
aq. TFA). The product fractions were diluted with a 7 M solution of ammonia in methanol and
evaporated under d pressure. The residue was dissolved in ethyl acetate and washed with
water. The organic phase was dried with sodium sulfate and concentrated under reduced re.
The residue was dissolved in 1,4-dioxane and lyophilized yielding 24 mg (52% of th.) of the title
10 compound.
LC-MS (method 5): R = 1.85 min; MS (ESIpos): m/z = 481 (M+H)+
1H-NMR (400 MHz, s): 8 = 7.99 (s, 1H), 7.73-8.01 (br. s, 1H), 7.41 (s, 1H), 7.33 (s, 1H),
6.87 (s, 1H), 5.2-5.7 (br. s, 1H), 3.95 (s, 3H), 3.57 (s, 2H), 3.14 (br. s, 2H), 2.60 (br. s, 4H), 2.46
(s, 3H), 1.70 (br. s, 6H) ppm.
15 Example 75
[4—Amino(7-methoxymethylbenzothiophen—2-yl)methylpyrrolo [2, 1 -f] [1 ,2,4]triazin—6-yl] -
methanol
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—177—
Under an argon atmosphere, a flask was charged with 165 mg (0.64 mmol) of ediate 53A, 143
mg (0.64 mmol) of Intermediate 5A, 25 mg (0.03 mrnol) (2'-aminobiphenylyl)(chloro)palladium—
dicyclohexyl(2',4',6'-t1iisopropylbiphenylyl)phosphine (1 :1; see S. L. Buchwald et al., J. Am.
Chem. Soc. 132 (40), 14073-14075 ) and 409 mg (1.93 mmol) potassium phosphate. Then, 7
ml of a degassed mixture of 1,4-dioxane and water (5:1) were added, and the solution was stirred at
70°C for 1 h. Another portion of Intermediate 5A (142 mg, 0.64 mmol) and of (2'-aminobiphenyl
yl)(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine (10 mg, 0.012 mmol)
were added, and stirring was continued for 1 h. After this, the reaction mixture was partially
10 evaporated under reduced pressure, water was added, and the mixture was extracted with ethyl
acetate. The combined organic phases were evaporated under reduced pressure, and the residue was
triturated with acetonitrile. The precipitate was filtered off and dried in vacuo yielding 180 mg (92%
purity by LC-MS, 73% of th.) of the title compound. From the filtrate a second batch (41 mg, 18%
of th.) was obtained by preparative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/O.1% aq.
15 formic acid). Total yield: 91% of th.
LC-MS d 5): R. = 1.92 min; MS (ESIpos): m/z = 355 (M+H)+
1H—NMR (400 MHz, DMSO-ds): 8 = 7.95 (s, 1H), 7.35 (s, 1H), 7.30 (s, 1H), 6.83 (s, 1H), 4.82 (t,
1H), 4.44 (d, 2H), 3.95 (s, 3H), 2.45 (s, 3H) ppm.
Example 76
20 4- { no(7-methoxy—5-methylbenzothiophen—2-yl)methylpyrrolo [2, 1 -f] [1 ,2,4]triazin—6-
yl]methyl}piperazin—2-one
D
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-178—
A suspension of 55 mg (0.16 mmol) of Intermediate 54A in THF (1.5 ml) was treated with 78 mg
(0.78 mmol) piperazin—2-one, 18 pl (0.31 mmol) acetic acid and 166 mg (0.78 mmol) triacetoxy-
dride. The mixture was stirred at ambient temperature overnight. Then, 1.5 ml water were
added, and most of the THF solvent was evaporated under d pressure. The remaining mixture
was diluted with more water, and the precipitated solid was filtered off and dried (35 mg). This
material was further purified by preparative RP—HPLC (Reprosil C18, gradient 10—95% aceto—
nitrile/0.1% aq. formic acid). The product fractions were adjusted to pH 9 with solid potassium
carbonate and partially concentrated under reduced pressure. The itated solid was filtered off
10 and dried at 45°C in vacuo to afford 16 mg (24% of th.) of the title compound.
LC-MS (method 5): R = 1.74 min; MS (ESIpos): m/z = 437 (M+H)+
lH-NMR (400 MHz, DMSO-da): 8 = 7.95 (s, 1H), 7.66 (br. s, 1H), 7.35 (s, 1H), 7.30 (s, 1H), 6.83
(s, 1H), 3.95 (s, 3H), 3.50 (s, 2H), 3.05 (m, 2H), 2.84 (s, 2H), 2.45 (m, 5H) ppm.
Example 77
15 1 —( { [4-Amino(7-methoxymethyl— 1 —benzothiophen—2-yl)methylpyrrolo[2, 1 —f] [1 ,2,4]triazin—6-
yl]methyl} amino)-2—methylpropan—2-ol formiate
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—179—
H3C
ICH3
0
CH
N/ 3
/ 3C
k / OH
\ ,N
N
H
CH3 xHCOOH
A suspension of 55 mg (0.16 mmol) of Intermediate 54A in THF (1.5 ml) was d with 98 mg
(0.78 mmol) 1-aminomethylpropan—2-ol hydrochloride, 39 mg (0.47 mmol) sodium acetate and
166 mg (0.78 mmol) sodium triacetoxyborohydride. The mixture was stirred at ambient temperature
overnight. Then, 1.5 ml water were added, and the mixture was evaporated under reduced pressure.
The residue was purified by preparative RP-HPLC (Reprosil C18, gradient 10-95% aceto-
nitrile/O. 1% aq. formic acid) to afford 38 mg (52% of th.) of the title compound.
LC-MS (method 5): R = 1.68 min; MS (ESIpos): m/z = 426 (M+H)+
lH—NMR (400 MHz, DMSO-dg): 5 = 8.19 (s, 1H), 7.94 (s, 1H), 7.38 (s, 1H), 7.29 (s, 1H), 6.84 (s,
10 1H), 3.95 (s, 3H), 2.45 (s, 3H), 2.34 (s, 2H), 1.02 (s, 6H) ppm.
Example 78
1 —( { [4-Amino(7-methoxymethylbenzothiophen—2-yl)methylpyrrolo [2, 1 -f] [1 ,2,4]triazin—6-
hyl} amino)methylpropan—2-ol
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—l80—
A solution of 29 mg (0.06 mmol) of Example 77 in 3 ml of methanol was run through a Strato-
spheres SPE PL-HC03 MP-resin cartridge, preconditioned with 2 ml of methanol. The cartridge was
washed with 4 ml of ol, and the eluate was evaporated to afford 21.5 mg (82% of th.) of the
title nd.
LC-MS (method 4): R. = 0.68 min; MS (ESIpos): m/z = 426 (M+H)+
‘H—NMR (400 MHz, DMSO-ds): 8 = 7.94 (s, 1H), 7.37 (s, 1H), 7.28 (s, 1H), 6.83 (s, 1H), 4.07 (s,
1H), 3.95 (s, 3H), 3.63—3.75 (m, 2H), 2.45 (s, 3H), 2.32 (m, 3H), 1.42-1.56 (m, 1H), 1.02 (s, 6H)
Example 79
10 nochloro(7-methoxy—5-methyl-1—benzothiophen—2-yl)pyrrolo[2,1 -f] [1 ,2,4]triazin—6-yl] -
methanol
A solution of Intermediate 48A (117 mg, 0.24 mmol) in 5 ml THF was treated with 5 ml conc.
hydrochloric acid and stirred at ambient ature overnight. Then, 12 ml of 5 M aq. sodium
15 hydroxide solution as well as ethyl acetate were added, the layers were separated, and the aqueous
layer was extracted twice with ethyl acetate. The combined organic phases were washed with sat. aq.
sodium chloride solution, dried and evaporated. The residue was purified by preparative RP—HPLC
(Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) to afford 30 mg (34% of th.) of
the title nd.
20 LC-MS (method 2): R. = 0.90 min; MS (ESIpos): m/z = 375 (M+H)+
‘H-NMR (400 MHz, DMSO-da): 8 = 8.04 (s, 1H), 7.43 (s, 1H), 7.32 (s, 1H), 6.85 (s, 1H), 5.02 (t,
4.43 (d, 2H), 3.96 (s, 3H), 2.45
. (s, 3H) ppm.
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—181—
9.2 mg (10% of th.) of 7-chloro(chloromethyl)(7-methoxymethylbenzothiophenyl)-
pyrrolo[2,1-f] [1,2,4]triazin—4-amine were ed as a by-product (cf. Intermediate 50A).
e 80
4- { [4-Aminochloro(7-methoxymethyl-1 -benzothiophen—2-yl)pyrrolo [2, 1 -f] [1 riazin—
6—yl]methyl }piperazin—2-one
The title compound was prepared according to the procedure of Example 76 starting from 40 mg
(0.11 mmol) of Intermediate 49A. Yield: 27 mg (55% of th.).
LC-MS (method 2): R = 0.86 min; MS (ESIpos): m/z = 457 (M+H)+
10 1H-NMR (400 MHz, DMSO-ds): 8 = 8.05 (s, 1H), 7.68 (br. s, 1H), 7.44 (s, 1H), 7.31 (s, 1H), 6.85
(s, 1H), 3.96 (s, 3H), 3.52 (s, 2H), 3.05 (br. s, 2H), 2.86 (s, 2H), 2.45 (s, 3H) ppm.
Example 81
1—({[4-Aminochlor0(7-methoxy—5—methyl—1-benzothiophen—2-yl)pyrrolo[2,1—f] [1 ,2,4]t1iazin—6-
yl]methyl} amino)methylpropan—2-ol formiate
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—l82—
The title compound was prepared according to the procedure of Example 77 starting from 40 mg
(0.11 mmol) of Intermediate 49A. Yield: 24 mg (45% of th.).
LC-MS (method 2): R = 0.73 min; MS (ESIpos): m/z = 446 (M+H)+
‘H—NMR (400 MHz, DMSO-ds): 5 = 8.15 (s, 1H), 8.04 (s, 1H), 7.45 (s, 1H), 7.30 (s, 1H), 6.85 (s,
1H), 3.96 (s, 3H), 3.73 (s, 2H), 2.45 (s, 3H), 2.32 (s, 2H), 1.00 (s, 6H) ppm.
Example 82
1—( { [4-Aminochloro(7-methoxymethyl— l -benzothiophen—2-yl)pyrrolo[2, l -f] [1,2,4]triazin
yl]methyl} amino)methylpropan—2-ol
10
The title nd was prepared from e 81 according to the procedure of Example 78.
EMS (method 2): R = 0.72 min; MS (ESIpos): m/z = 446 (M+H)+
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_ 183 —
‘H-NMR (400 MHz, DMSO-ds): 8 = 8.04 (s, 1H), 7.45 (s, 1H), 7.30 (s, 1H), 6.85 (s, 1H), 4.09 (br.
s, 1H), 3.95 (s, 3H), 3.71 (s, 2H), 2.45 (s, 3H), 2.31 (s, 2H), 1.44-1.64 (m, 1H), 1.00 (s, 6H) ppm.
Example 83
7-Chloro(ethoxymethyl)(7-methoxymethyl- l -benzothiophen—2-yl)pyrrolo[2, l -f] [1,2,4]-
triazin—4-amine
8.2 mg (0.02 mmol) of Intermediate 50A were suspended in 1 ml of ethanol, treated with 41 ul (0.11
mmol) of a 2.68 M on of sodium ethanolate in ethanol and refluxed for 1 min. The clear solu-
tion was then evaporated, and the crude product was purified by preparative C (Reprosil
10 C18, gradient 10-95% acetonitrile/0.l% aq. formic acid) to afford 5 mg (56% of th.) of the title
compound.
LC-MS (method 4): R1 = 1.25 min; MS (ESIpos): m/z = 402 (M+H)+
1H—NMR (400 MHz, DMSO-da): 8 = 8.06 (s, 1H), 7.40 (s, 1H), 7.32 (s, 1H), 6.86 (s, 1H), 4.40 (s,
2H), 3.96 (s, 3H), 3.40 (q, 2H), 2.45 (s, 3H), 1.06 (t, 3H) ppm.
15 e 84
5—(7-Methoxymethylbenzothiophen—2—yl)—6-methyl(piperazin— l -ylmethyl)pyrrolo[2, l —f] -
[1,2,4]triazinamine formiate
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—184-
A solution of ediate 57A (100 mg, 191 umol) in a 4 M solution of hydrogen chloride in 1,4-
dioxane (2 ml) was stirred at rt for 3 h and then evaporated. Purification by two-fold preparative
RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.1% aq. formic acid) afforded 71 mg (67%
5 ofth.) of the title compound.
LC—MS (method 2): R: 0.81 min; MS (ESIpos): m/z = 423 (M+H)+
1H-NMR (400 MHZ, CDCl3)Z 6 = 8.46 (br. s, 1H), 7.89 (s, 1H), 7.27 (s, 1H, overlap with CHC13
peak), 7.18 (s, 1H), 6.67 (s, 1H), 4.01 (s, 3H), 3.97 (s, 2H), .09 (m, 4H), .73 (m, 4H),
2.50 (s, 3H), 2.24 (s, 3H) ppm.
10 Example 85
ro(7-methoxymethylbenzothiophen—2-yl)(piperazin— 1 -ylmethyl)pyrrolo[2, 1 —f] -
[1 ,2,4]triazin—4-amine trihydrochloride
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—l85—
Intermediate 60A (65 mg, 0.12 mmol) was stirred in 1 ml of a 4 M solution of hydrogen chloride in
1,4-dioxane for 2 h at rt. The suspension was evaporated to s, and the crude product was puri-
fied by preparative RP-HPLC (Reprosil C18, gradient 10-95% acetonitrile/0.l% aq. hydrochloric
acid) affording 49 mg (74% of th.) of the title compound.
LC-MS (method 2): R. = 0.81 min; MS (ESIpos): m/z = 443 (M+H)+
1H—NMR (400 MHz, DMSO-da): inter al. 8 = 9.56 (br. s, 1H), 8.45 (br. s, 1H), 8.19 (s, 1H), 7.44
(s, 1H), 7.36 (s, 1H), 6.89 (s, 1H), 6.30 (br. s, 1H), 4.63 (br. s, 1H), 3.40 (br. s, 8H), 2.46 (s, 3H)
Example 86
10 [4-Amino(ethoxymethyl)(7-methoxy—5—methyl- l -benzothiophen—2-yl)pyrrolo [2, 1 -f] [1 ,2,4] -
triazin—7-yl]methanol
The title compound (360 mg) was obtained as a side product in the ation of Example 5 by
preparation method 1.
15 LC—MS (method 2): R. = 0.99 min; MS (ESIpos): m/z = 399 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = .72 (br. s, 1H), 7.99 (s, 1H), 7.35 (s, 1H), 7.31 (s, 1H),
6.84 (s, 1H), 6.05-5.48 (br. s, 1H), 5.04 (br. s, 1H), 4.81 (d, 2H), 4.47 (s, 2H), 3.96 (s, 3H), 3.39
(q, 3H), 2.45 (s, 3H), 1.05 (t, 3H) ppm.
Example 87
20 D4-Amino(ethoxymethyl)(7-methoxymethyl-1 -benzothiophenyl)pyrrolo[2, l -f] [1 ,2,4] -
triazin—7-yl]methyl}imidazolidin—2—one
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—186—
A suspension of Intermediate 63A (100 mg, 0.221 mmol) in THF (5 ml) was treated with
imidazolidin—2-one (57 mg, 0.662 mmol) and N,N—diisopropylethylamine (153 pl, 0.926 mmol), and
the mixture was heated to 150°C for 90 min in a microwave oven. After this, the reaction mixture
5 was purified by preparative RP-HPLC (Reprosil C18, gradient 40-60% acetonitrile/0.2% aq.
trifluoroacetic acid). The product thus obtained was dissolved in ol and filtered through an
anion exchange cartridge (Stratospheres SPE, PL-HC03 MP-resin). The cartridge was eluted with
ol, and the filtrate was evaporated. The product was purified once again by preparative thin
layer chromatography over silica gel (cyclohexane/ethyl acetate 3:1) affording 24 mg (22% of th.) of
10 the title compound.
LC-MS (method 2): R. = 0.99 min; MS (ESIpos): m/z = 467 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.21—7.65 (br. s, 1H), 7.99 (s, 1H), 7.36 (s, 1H), 7.31 (s, 1H),
6.84 (s, 1H), 6.38 (s, 1H), .56 (br. s, 1H), 4.65 (s, 2H), 4.46 (s, 2H), 3.95 (s, 3H), 3.38 (q,
2H), 3.31-3.10 (m, 4H), 2.45 (s, 3H), 1.06 (t, 3H) ppm.
15 Example 88
4— { [4-Amino(7-methoxybenzothiophen—2—yl)(methoxymethyl)pyrrolo[2, 1 -f] [1 ,2,4]triazin—7-
yl]methyl}piperazin—2-one
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—187—
To a solution of Intermediate 62A (72.6 mg, 197 umol), (7-methoxybenzothiophen—2—yl)boronic
acid (45 mg, 216 umol) and caesium fluoride (149 mg, 983 umol) in degassed THF/water (10:1,
2.2 ml) under argon was added (2'-aminobiphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'—triiso-
propylbiphenylyl)phosphine (1 :1; 7.7 mg, 9.8 umol; see S. L. Buchwald et al., J. Am. Chem. Soc.
132 (40), 14073-14075 (2010)). The resulting mixture was degassed again and stirred under argon
at 60°C for 3 h. After this, the mixture was separated by preparative RP-HPLC (Reprosil C18,
gradient 20-40% acetonitrile/0.1% aq. TFA). The product fractions were combined and evaporated
to s. The residue was dissolved in methanol and filtered through an anion exchange cartridge
10 (Stratospheres SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the e
was evaporated affording 31 mg (35% of th.) ofthe title compound.
LC-MS (method 2): R. = 0.71 min; MS (ESIpos): m/z = 453 (M+H)+
1H-NMR (400 MHz, DMSO-ds): 8 = 8.00 (s, 1H), 7.72 (s, 1H), 7.61-8.23 (br. s, 1H), 7.51 (d, 1H),
7.46 (s, 1H), 7.40 (t, 1H), 6.99 (d, 1H), .11 (br. s, 1H), 4.42 (s, 2H), 3.98 (s, 5H), 3.20 (s,
15 3H), 3.11 (br. m, 2H), 3.01 (s, 2H), 2.62-2.67 (m, 2H) ppm.
Example 89
4— { [4-Amino(methoxymethyl)(5-methyl— 1 —benzothiophen—2-yl)pyrrolo[2, 1 -f] [1 ,2,4]triazin—
7-yl]methyl}piperazin—2-one
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—l88—
To a on of Intermediate 62A (50 mg, 135 umol), (5-methylbenzothiophen—2-yl)boronic acid
(28.6 mg, 149 umol) and caesium fluoride (103 mg, 677 umol) in degassed THF/Water (10:1,
4.4 ml) under argon was added (2'-aminobiphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'—triiso-
propylbiphenylyl)phosphine (1:1; 5.3 mg, 6.8 umol; see S. L. Buchwald et al., J. Am. Chem. Soc.
132 (40), 14073-14075 (2010)). The resulting mixture was degassed again and stirred under argon
at 60°C for 16 h. After this, the mixture was separated by preparative RP-HPLC (Reprosil C18,
gradient 30-50% acetonitrile/0.1% aq. TFA). The product fractions were combined and evaporated
to dryness. The residue was dissolved in methanol and filtered h an anion exchange cartridge
10 (StratoSpheres SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the e
was evaporated ing 27 mg (45% of th.) ofthe title compound.
LC-MS d 2): R = 0.79 min; MS (ESIpos): m/z = 437 (M+H)+
1H—NMR (400 MHz, DMSO-dg): 5 = 8.00 (s, 1H), 7.89 (d, 1H), 7.73 (s, 1H), 7.71 (s, 1H), 7.58—
8.18 (br. s, 1H), 7.40 (s, 1H), 7.24 (dd, 1H), 5.58-6.03 (m, 1H), 4.42 (s, 2H), 3.97 (s, 2H), 3.21 (s,
15 3H), 3.11 (br. t, 2H), 3.01 (s, 2H), 2.64 (t, 2H), 2.44 (s, 3H) ppm.
Example 90
l - [4-Amino(ethoxymethyl)(7-methoxy-5—methylbenzothiophen—2-yl)pyrrolo [2, l -f] [1 ,2,4] -
triazin—7-yl]ethanol
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—l89—
Under argon, a 1 M solution of methylmagnesium e in THF (630 pl, 630 umol) was added
dropwise at rt to a solution of Intermediate 17A (100 mg, 252 umol) in THF (10 ml). The mixture
was stirred at rt for 3 h and then treated with another portion of methylmagnesiurn bromide in THF
(177 pl, 177 umol). The reaction e was stirred for r 16 h, then quenched with sat. aq.
ammonium chloride solution and extracted with ethyl acetate. The ed organic layers were
washed with brine, dried with magnesium sulfate, filtered and ated. The residue was purified
by preparative RP-HPLC (Reprosil C18, nt 40-60% acetonitrile/O.1% aq. TFA). The product
fractions were diluted with sat. aq. sodium hydrogencarbonate solution and extracted with ethyl
10 acetate. The organic phase was washed with sat. aq. sodium chloride solution, dried with magnesium
sulfate, filtered and evaporated yielding 39 mg (36% of th.) of the title compound.
LC-MS (method 4): R. = 1.07 min; MS (ESIpos): m/z = 413 (M+H)+
lH-NMR (400 MHz, DMSO-ds): 5 = 7.95 (s, 1H), 7.56-8.07 (br. s, 1H), 7.35 (s, 1H), 7.31 (s, 1H),
6.84 (s, 1H), 5.46-5.54 (m, 1H), 5.37-5.95 (br. s, 1H), 5.26 (d, 1H), 4.67 (d, 1H), 4.38 (d, 1H),
15 3.95 (s, 3H), 3.38 (q, 2H), 2.45 (s, 3H), 1.52 (d, 3H), 1.05 (t, 3H) ppm.
Example 91
[4—Amino(ethoxymethyl)(7-methoxy—5—methylbenzothiophenyl)pyrrolo [2, 1 -f] [l ,2,4] -
triazinyl](cyclopropyl)methanol
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Under argon, a 0.5 M solution of cyclopropylmagnesium bromide in THF (1.26 ml, 630 umol) was
added se at rt to a solution of Intermediate 17A (100 mg, 252 umol) in THF (5 ml). The
mixture was stirred at rt for 1 h, then quenched with sat. aq. ammonium chloride solution and
extracted with ethyl acetate. The combined organic layers were washed with brine, dried with
magnesium sulfate, filtered and evaporated. The residue was purified by preparative RP—HPLC
(Reprosil C18, gradient 50-70% itrile/O. 1% aq. TFA). The product fractions were diluted with
sat. aq. sodium hydrogencarbonate solution and extracted with ethyl acetate. The organic phase was
washed with sat. aq. sodium chloride solution, dried with magnesium e, d and evaporated
10 yielding 10 mg (10% of th.) of the title compound.
LC-MS (method 2): R1 = 1.13 min; MS (ESIpos): m/z = 439 (M+H)+
lH-NMR (400 MHz, DMSO-da): 8 = 7.94 (s, 1H), 7.68—8.04 (br. s, 1H), 7.36 (s, 1H), 7.31 (s, 1H),
6.84 (s, 1H), 5.47—5.89 (br. s, 1H), 5.30 (d, 1H), 4.64 (d, 1H), 4.59-4.67 (m, 1H), 4.39 (d, 1H),
3.96 (s, 3H), 3.38 (q, 2H), 2.45 (s, 3H), 1.54-1.64 (m, 1H), 1.04 (t, 3H), 0.51—0.59 (m, 1H), 0.40—
15 0.47 (m, 1H), 0.28-0.38 (m, 2H) ppm.
Example 92
(3S)-3 -( { [4-Amino(methoxymethyl)(7-methoxy—5-methylbenzothiophen—2-yl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—7-yl]methyl} amino)pyrrolidin—2—one
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—191—
A suspension of Intermediate 13A (100 mg, 0.233 mmol) in THF (2 ml) was treated with (S)
aminopyrrolidin—2-one (35 mg, 0.349 mrnol), sodium triacetoxyborohydride (148 mg, 0.698 mmol)
and acetic acid (26.6 ul, 0.465 mrnol). The resulting mixture was stirred at rt for 3 h and then
directly purified by preparative RP-HPLC sil C18, nt 40-60% acetonitrile/O.2% aq.
trifluoroacetic acid). The product fractions were combined and evaporated to dryness. The residue
was dissolved in methanol and filtered through an anion exchange cartridge (Stratospheres SPE, PL-
HC03 in). The cartridge was eluted with methanol, and the filtrate was evaporated ing
56 mg (51% of th.) of the title nd.
10 LC-MS (method 4): R. = 0.72 min; MS (ESIpos): m/z = 467 (M+H)+
1H-NMR (400 MHz, DMSO-da): 5 = 8.01 (s, 1H), 7.76 (s, 1H), 7.35 (s, 1H), 7.31 (s, 1H), 6.85 (s,
1H), 4.48 (d, 2H), 4.43 (d, 2H), 4.24-4.02 (m, 2H), 3.96 (s, 3H), 3.26-2.99 (m, 6H), 2.45 (s, 3H),
2.40—2.27 (m, 1H), 1.82-1.64 (m, 1H) ppm.
Example 93
15 (3S)-3 -( { [4-Amino(ethoxymethyl)(7-methoxymethyl-1 -benzothiophen—2-yl)pyrrolo[2, 1 -f] -
[1 ,2,4]triazin—7-yl]methyl} amino)pyrrolidin—2—one
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—l92—
A suspension of Intermediate 17A (100 mg, 0.252 mmol) in THF (2 ml) was treated with (S)
yrrolidin—2-one (38 mg, 378 umol), sodium toxyborohydride (160 mg, 757 umol) and
acetic acid (30 pl, 504 umol). The resulting e was d at rt for 3 h and then directly
purified by preparative RP-HPLC (Reprosil C18, gradient 30-50% acetonitrile/0.2% aq. trifluoro-
acetic acid). The product fractions were ed and evaporated to dryness. The residue was
dissolved in methanol and filtered through an anion exchange cartridge (Stratospheres SPE, PL-
HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate was evaporated affording
84 mg (69% of th.) of the title compound.
10 LC-MS (method 4): R = 0.75 min; MS (ESIpos): m/z = 481 (M+H)+
1H—NMR (400 MHz, DMso-d6): 8 = 8.00 (s, 1H), 7.75 (s, 1H), 7.67-8.11 (br. s, 1H), 7.35 (s, 1H),
7.31 (s, 1H), 6.85 (s, 1H), 5.5-6.0 (br. s, 1H), 4.44 (q, 2H), 4.14—4.21 (m, 1H),4.02-4.11 (m, 1H),
3.38—3.45 (q, 2H), 3.16-3.24 (m, 1H), 3.05—3.16 (m, 2H), 2.45 (s, 3H), .40 (m, 1H), 1.67—
1.79 (m, 1H), 1.08 (t, 3H) ppm.
15 General ure for the preparation of Examples 94—105 in Table 1:
A 0.13 M suspension of Intermediate 17A in THF was treated with 1.5 eq. of the tive amine
component, 3 eq. of sodium triacetoxyborohydride and 1.5 eq. of acetic acid. The resulting mixture
was stirred at 60°C for 3—20 h. After this, purification was carried out according to the methods
indicated.
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Table I
Example Structure Purification LC-MS data
No. method(s)
94 P1,P5 Method 4:
R1 = 1.22 min;
MS (ESIpos): m/z =
468 (M+H)+
P6, P3 Method 2:
R = 0.92 min;
MS (ESIpos): m/Z =
509 (M+H)+
P1,P5 Method 4:
R = 0.83 min;
MS (ESIpos): m/Z =
452 (M+H)+
P1,P5 Method 5:
R1 = 1.84 min;
MS (ESIpos): m/z =
454 (M+H)+
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Example Structure Purification LC-MS data
No. method(s)
98 P1,P5 Method 5:
R1 = 1.82 min;
MS (ESIpos): m/z =
482 (M+H)+
99 P1,P5 Method 5:
R1 = 2.21 min;
MS (ESIpos): m/z =
516 (M+H)+
100 P1,P5 Method 2:
R = 0.86 min;
MS (ESIpos): m/z =
507 (M+H)+
101 P1,P5 Method 2:
R1 = 0.81 min;
MS (ESIpos): m/z =
468 (M+H)+
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Example Structure ation LC-MS data
No. method(s)
102 P1, P5, P4 Method 2:
R1 = 1.03 min;
MS (ESIpos): m/z =
474 (M+H)+
103 P1, P5, P2 Method 2:
R1 = 1.05 min;
MS (ESIpos): m/z =
460 (M+H)+
104 P1,P6 Method 2:
R = 0.91 min;
MS (ESIpos): m/z =
467 (M+H)+
105 P1,P6 Method 2:
R = 0.89 min;
MS (ESIpos): m/z =
495 (M+H)+
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Example 106
4—Amino(ethoxymethyl)(7-methoxy—5—methy1— 1 thiophen—2-y1)-N— [(3R)oxopyrrolidin—
3—y1]pyrrolo[2,1-f][1,2,4]triazinecarboxamide
NH
A stirred solution of Intermediate 64A (50 mg, 121 umol) in DMF (2 ml) was treated at rt with
N—[(1H—benzotriazolyloxy)(dimethylamino)methylene] -N—methylmethanaminium tetrafluoroborate
(TBTU) (43 mg, 133 umol) and DIPEA (53 pl, 303 umol). After 15 min, (3R)arnjnopyrrolidin
one (24 mg, 242 umol) was added, and the resulting mixture was stirred at rt for further 2 h. After
this, the mixture was separated by preparative RP-HPLC (Reprosil C18, gradient 30-50%
10 acetonitrile/0.2% aq. trifluoroacetic acid). The product fractions were combined and evaporated to
s. The residue was dissolved in methanol and filtered through an anion exchange cartridge
(Stratospheres SPE, PL-HC03 MP-resin). The cartridge was eluted with methanol, and the filtrate
was evaporated affording 36 mg (60% of th.) of the title compound.
LC—MS (method 2): R: = 0.91 min; MS (ESIpos): m/z = 495 (M+H)+
15 1H-NMR (400 MHz, DMSO-da): 5 = 9.50 (d, 1H), 8.21-8.45 (br. s, 1H), 8.17 (s, 1H), 7.97 (s, 1H),
7.41 (s, 1H), 7.33 (s, 1H), 6.86 (s, 1H), 5.84—6.09 (br. s, 1H), 4.74 (dd, 2H), 4.47-4.56 (m, 1H),
3.96 (s, 3H), 3.37 (q, 2H), 3.22-3.29 (m, 2H), .61 (m, 1H), 2.46 (s, 3H), 1.90-2.03 (m, 1H),
1.00 (t, 3H) ppm.
e 107
20 Q4-Amino(ethoxymethyl)(7-methoxymethylbenzothiophenyl)pyrrolo[2,1-f][1 ,2,4] -
triazin—7-y1]carbonyl}piperazin—2-one
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—l97—
A stirred solution of Intermediate 64A (50 mg, 121 umol) in DMF (2 ml) was treated at rt with
TBTU (43 mg, 133 umol) and DIPEA (53 u], 303 umol). After 15 min, piperazin—2-one (24 mg,
242 umol) was added, and the resulting mixture was stirred at rt for further 16 h. After this, the
mixture was separated by preparative C (Reprosil C18, gradient 40-60% acetonitrile/O.2%
aq. trifluoroacetic acid). The product fractions were ed and evaporated to dryness. The resi—
due was dissolved in methanol and filtered through an anion exchange dge (Stratospheres SPE,
PL—HC03 MP-resin). The cartridge was eluted with ol, and the filtrate was evaporated
affording 45 mg (68% of th.) of the title compound.
10 LC—MS (method 2): R. = 0.92 min; MS (ESIpos): rn/z = 495 (M+H)+
lH-NMR (400 MHz, DMSO-da): 8 = 8.14 (br. s, 1H), 7.99-8.01 (m, 1H), 7.9-8.3 (br. s, 1H), 7.41
(d, 1H), 7.32 (s, 1H), 6.86 (s, 1H), 5.78—6.05 (br. s, 1H), 4.30—4.49 (m, 2H), 4.13—4.23 (m, 1H),
4.03—4.10 (m, 1H), 3.96 (s, 3H), 3.76-3.87 (m, 1H), 3.57—3.74 (m, 1H), 3.35—3.43 (m, 2H), 3.14—
3.25 (m, 1H), 2.45 (s, 3H), 0.96-1.05 (m, 3H) ppm.
15 General procedure for the ation of Examples 108—123 in Table 11:
A 0.13 M solution of Intermediate 64A in DMF was treated with 1.1 eq. TBTU and 2.5 eq. DIPEA
and stirred at rt for 15 min. 2 eq. of the respective amine were added, and the resulting mixture was
stirred at rt for further 18 h. After this, purification was carried out according to the methods
indicated.
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Table 11
Example Structure Purification LC-MS data
No. method(s)
108 P1 Method 2:
R1 = 1.02 min;
MS (ESIpos): m/z =
456 (M+H)+
109 P1 Method 4:
Rt = 0.97 min;
MS (ESIpos): m/Z =
412 (M+H)+
110 P1, P5 Method 2:
R1 = 1.01 min;
MS (ESIpos): m/z =
426 (M+H)+
111 P1,P5 Method 4:
R = 1.11 min;
MS (ESIpos): m/z =
440 (M+H)+
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—199—
Example Structure ation LC-MS data
No. method(s)
P1 Method 4:
R1 = 1.07 min;
MS (ESIpos): m/z =
482 (M+H)+
P1,P5 Method 2:
R = 0.84 min;
MS (ESIpos): m/z =
523 (M+H)+
P1,P5 Method 2:
R = 0.96 min;
MS (ESIpos): m/z =
440 (M+H)+
P1,P5 Method 2:
R = 1.09 min;
MS (ESIpos): m/z =
452 (M+H)+
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—200—
Example Structure Purification LC-MS data
No. method(s)
116 P1,P5 Method 4:
R = 0.95 min;
MS (ESIpos): m/z =
495 (M+H)+
117 P1,P5 Method 4:
R = 0.93 min;
MS (ESIpos): m/z =
481 (M+H)+
118 P1,P5 Method 2:
R = 0.93 min;
MS (ESIpos): m/z =
482 (M+H)+
119 P1,P5 Method 2:
R1 = 1.04 min;
MS (ESIpos): m/z =
516 (M+H)+
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e Structure Purification LC-MS data
No. method(s)
P1,P5 Method 4:
R = 0.88 min;
MS (ESIpos): m/z =
468 (M+H)+
P1,P5 Method 4:
R = 0.91 min;
MS (ESIpos): m/z =
496 (M+H)+
P1,P5 Method 4:
R = 1.09 min;
MS s): m/z =
488 (M+H)+
P1,P5 Method 4:
RI = 0.98 min;
MS (ESIpos): m/z =
530 (M+H)+
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Example 124
4— { [4-Amino-5 -(5 1 —f] [1 ,2,4] -
, 7-dimethoxy-1 -benzothiophen—2-yl)(methoxymethyl)pyrrolo [2,
triazin—7-yl]methy1}piperazin—2-one
To a solution of Intermediate 62A (100 mg, 271 umol), Intermediate 66A (77 mg, 325 umol) and
caesium fluoride (206 mg, 1.35 mmol) in degassed THF/water (10:1; 5 m1) under argon was added
(2'—arninobipheny1—2-y1)(chloro)palladium—dicyclohexy1(2',4',6'-triisopropylbiphenyly1)phosphine
(1:1; 42.6 mg, 54 umol; see S. L. Buchwald et al., J. Am. Chem. Soc. 132 (40), 14073—14075
(2010)). The ing mixture was degassed again and d under argon at 60°C for 6 h. Then,
10 another portion of Intermediate 66A (39 mg, 162 umol) was added, and stirring at 60°C was con-
tinued for 10 h. After this, the reaction mixture was separated by preparative RP-HPLC sil
C18, gradient 30-50% acetonitrile/0.1% aq. TFA). The product ons were combined and evapo-
rated to dryness. The residue was dissolved in methanol and filtered through an anion exchange
cartridge (Stratospheres SPE, PL—HC03 MP—resin). The dge was eluted with methanol, and the
15 filtrate was ated affording 40 mg (28% of th.) of the title compound.
LC-MS (method 2): R. = 0.78 min; MS (ESIpos): m/z = 483 (M+H)+
1H-NMR (500 MHz, DMSO-ds): 8 = 7.99 (s, 1H), 7.68 (br. s, 1H), 7.49-8.17 (br. s, 1H), 7.37 (s,
1H), 7.05 (d, 1H), 6.63 (d, 1H), 5.5-6.0 (br. s, 1H), 4.42 (s, 2H), 3.97 (s, 2H), 3.94 (s, 3H), 3.84 (s,
3H), 3.20 (s, 3H), 3.09-3.14 (m, 2H), 3.01 (s, 2H), 2.62-2.67 (m, 2H) ppm.
D
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Example 125
4— { [4-Amino(hydroxymethyl)(7-methoxy—5—methylbenzothiophen—2-yl)pyrrolo [2, 1 —f] [1 ,2,4] -
triazin—6-yl]methyl}piperazin—2-one
To a suspension of Intermediate 70A (700 mg, 1.49 mmol), Intermediate 5A (497 mg, 2.24 mmol)
and caesium fluoride (1.36 g, 8.95 mmol) in degassed THF/water (2:1, 90 ml) under argon was
added (2'-aminobiphenylyl)(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phos-
phine (1:1; 117 mg, 0.149 mmol; see S. L. Buchwald et al., J. Am. Chem. Soc. 132 (40), 14073-
14075 (2010)). The resulting mixture was degassed again and stirred under argon at 60°C overnight.
10 Another portion of Intermediate 5A (231 mg, 1.04 mmol) and (2'-aminobiphenylyl)-
(chloro)palladium—dicyclohexyl(2',4',6'-triisopropylbiphenylyl)phosphine (1:1; 117 mg, 0.149
mmol) were added, and stirring was continued at 60°C for 3 h. The itate was filtered off,
washed with THF and dried in vacuo. The solid was suspended in mixture of DMF and 1 M aq.
trifluoroacetic acid and filtered. The filtrate was separated by preparative C (Reprosil C18,
15 gradient 20-40% acetonitrile/0.2% aq. trifluoroacetic acid). The product fractions were combined
and then alkalized by addition of sat. aq. sodium bicarbonate solution. The solution was extracted
with ethyl acetate, and the organic layer was washed with brine, dried over magnesium sulfate and
evaporated to yield 88 mg of the title nd (13% of th.).
LC-MS (method 2): R. = 0.70 min; MS (ESIpos): m/z = 453 (M+H)+
20 1H—NMR (400 MHz, s): inter al. 8 = 7.6-8.0 (br. s, 1H), 7.98 (s, 1H), 7.71 (s, 1H), 7.37
(s, 1H), 7.31 (s, 1H), 6.84 (s, 1H), 5.4-5.8 (br. s, 1H), 5.19 (t, 1H), 4.85 (d, 2H), 3.95 (s, 3H), 3.58
DH), 3.04 (br. m, 2H), 2.88 (s, 2H), 2.45 (s, 3H) ppm.
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Example 126
4— { [4-Arnino(methoxymethyl)(7-methoxy—5-methy1— 1 -benzothiophen—2-yl)pyrrolo [2, 1 —f] —
[1 ,2,4]triazin—6-yl]methyl}piperazin—2-one
A suspension of Example 125 (88 mg, 194 umol) in dichloromethane (5 ml) was treated with thionyl
chloride (29 pl, 389 umol), and the mixture was stirred at rt for 65 min. r portion of thionyl
chloride (29 pl, 389 umol) was added, and stirring was continued for 1.5 h. An excess of ol
was then added, followed by dropwise addition of a 5.4 M on of sodium methylate in methanol
(84 mg, 1.56 mmol) until pH 8 was reached. After stirring for 3 days, the volatiles were evaporated
10 under reduced pressure, and the residue was separated by preparative RP-HPLC (Reprosil C18,
gradient 20-40% acetonitrile/O.2% aq. trifluoroacetic acid). The product fractions were evaporated
to yield 19 mg of the title nd (21% of th.).
LC—MS (method 2): R = 0.77 min; MS (ESIpos): m/z = 466 (M+H)+
1H—NMR (400 MHZ, DMSO-ds): 8 = 7.99 (s, 1H), 7.75-8.11 (br. s, 1H), 7.68 (s, 1H), 7.38 (s, 1H),
15 7.31 (s, 1H), 6.84 (s, 1H), 5.51-5.82 (m, 1H), 4.77 (s, 2H), 3.95 (s, 3H), 3.55 (s, 2H), 3.31 (s, 3H),
3.04 (br. s, 2H), 2.85 (s, 2H), 2.42-2.48 (m, 5H) ppm.
Example 127
4— { [4-Amino(ethoxymethyl)(7-methoxy—5—methylbenzothiophen—2-y1)pyrrolo [2, 1 —f] [1 ,2,4] -
triazin—6-yl]methyl}piperazin—2-one
D
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—205—
A suspension of Example 125 (100 mg, 221 umol) in dichloromethane (10 ml) was treated with
thionyl chloride (161 pl, 2.21 mmol), and the e was stirred at rt for 30 min. Ethanol was
added, and the volatiles were evaporated under reduced pressure. The residue was dissolved in
ethanol (10 ml), sodium ethylate (30 mg, 442 umol) was added, and the e was d at rt for
1 h. The mixture was then directly separated by preparative RP-HPLC (Reprosil C18, gradient 20—
40% acetonitrile/O.2% aq. roacetic acid). The product fractions were combined and alkalized
by addition of sat. aq. sodium bicarbonate solution. The solution was extracted with ethyl acetate,
and the c layer was washed with brine, dried over magnesium sulfate and evaporated to yield
10 57 mg of the title compound (54% of th.).
LC-MS (method 2): R. = 0.85 min; MS (ESIpos): m/z = 480 (M+H)+
‘H—NMR (400 MHz, DMSO-da): 5 = 7.99 (s, 1H), 7.75-8.09 (br. s, 1H), 7.64-7.71 (m, 1H), 7.38
(s, 1H), 7.31 (s, 1H), 6.84 (s, 1H), 5.38-5.91 (br. s, 1H), 4.81 (s, 2H), 3.95 (s, 3H), 3.49—3.59 (m,
4H), 2.99-3.08 (m, 2H), 2.86 (s, 2H), 1.12 (t, 3H) ppm.
15
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—206—
B. Evaluation of Biological Activifl
Abbreviations and Acronyms:
AhX 6-amin0hexanoic acid
ATP adenosine triphosphate
BSA bovine serum albumin
CREB CAMP-response element-binding protein
DMSO dimethylsulfoxide
EDTA ethylenediaminetetraacetic acid
EGTA ethyleneglycol—bis(2—aminoethylether)-N,N,N’, ’-tetraacetic acid
FBS fetal bovine serum
FGF fibroblast growth factor
FGFR fibroblast growth factor receptor
GFP green fluorescent protein
GST glutathione S-transferase
HEPES 4-(2-hydroxyethyl)piperazine- l -ethansulf0nic acid
HRTF homogeneous time-resolved fluorescence
MOPS 3-(N—morpho1ino)propanesulfonic acid
mTOR mammalian target of cin
PBS phosphate buffered saline
PI3K phosphatidylinositol 3-kinase
RTK receptor tyrosine kinase
SNP single nucleotide polymorphism
TR—FRET time-resolved fluorescence resonance energy transfer
VEGF vascular endothelial growth factor
VEGFR vascular endothelial growth factor or
tration of the activity of the compounds of the present invention may be accomplished
through in vitro, ex vivo, and in vivo assays that are well known in the art. For example, to
trate the activity of the compounds of the present invention, the following assays may be
used.
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—207—
B-l. FGFR-l high ATP kinase assay
FGFR-l inhibitory activity at high ATP concentration of the compounds of the present invention
after their pre-incubation with FGFR-l was quantified employing the TR-FRET based FGFR-l high
ATP assay as described in the following paragraphs:
A recombinant tagged FGFR-l fusion protein [fusion of glutathione-S—transferase (GST) (N-ter-
minally), ag, thrombin cleavage site, and the intracellular part of human FGFR-l from amino
acids G400 to R800 as in GenBank entry NM_015850], expressed in SF9 insect cells using —
virus sion system and purified via glutathione-agarose y chromatography, was pur-
chased from Proqinase (product no. 0101—0000—1) and used as enzyme. As substrate for the kinase
10 reaction, the biotinylated peptide -Ahx—AAEEEYFFLFAKKK (C-terminus in amide form) was
used which can be purchased, e. g., from Biosyntan (Berlin-Buch, Germany).
Usually, test compounds were tested on the same iter plate at 11 different concentrations in the
range of 20 uM to 0.1 nM (e.g. 20 nM, 5.9 uM, 1.7 uM, 0.51 nM, 0.15 nM, 44 nM, 13 nM,
3.8 nM, 1.1 nM, 0.33 nM, and 0.1 nM) in duplicates for each concentration. The dilution series was
15 prepared separately prior to the assay as 100—fold concentrated stock solutions in DMSO; exact
concentrations could vary ing on the pipettor used. For the assay, 50 n1 of each stock solution
of the test compound in DMSO was pipetted into a black, low-volume ll microtiter plate
(Greiner Bio-One, Frickenhausen, Germany). 2 ul of a solution of the above FGFR-l fusion protein
in aqueous assay buffer [8 mM MOPS pH 7.0, 10 mM magnesium acetate, 1.0 mM dithiothreitol,
20 0.05% (w/v) bovine serum albumin (B SA), 0.07% (v/v) Tween-20, 0.2 mM EDTA] was added, and
the mixture was incubated for 15 min at 22°C to allow pre-binding of the test compound to the
. Then, the kinase reaction was started by the on of 3 ul of a solution of adenosine
triphosphate (ATP, 3.3 mM; final concentration in the 5 ul assay volume = 2 mM) and substrate
(0.16 uM; final tration in the 5 ul assay volume = 0.1 nM) in assay buffer, and the resulting
25 mixture was incubated for a reaction time of 15 min at 22°C. The concentration of FGFR—l fusion
protein was adjusted depending on the activity of the enzyme lot and was chosen appropriately to
have the assay in the linear range (typical concentrations were in the range of 0.05 ug/ml). The
reaction was d by the addition of 5 ul of a solution of HTRF detection reagents [25 nM
streptavidin—XL665 (Cis Biointemational) and 1 nM PT66-Eu-chelate, an europium—chelate labelled
30 anti-phosphotyrosine antibody n-Elmer; PT66-Tb-cryptate from Cis emational may be
used instead), in an aqueous EDTA solution (50 mM EDTA, 0.1% (w/v) BSA in 50 mM
EDES/NaOH pH 7.5)].
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—208—
The resulting mixture was incubated for 1 h at 22°C to allow formation of the x n the
phosphorylated biotinylated peptide and the detection reagents. Subsequently, the amount of
phosphorylated substrate was evaluated by measurement of the resonance energy transfer from the
Eu-chelate to the streptavidin—XL665. For this, the fluorescence emissions at 620 nm and 665 nm
after excitation at 350 nm were measured in a TR-FRET reader [e.g. Rubystar (BMG Labtech—
nologies, Offenburg, Germany) or Viewlux (Perkin-Elmer)]. The ratio of the emissions at 665 nm
and at 620 nm was taken as the measure for the amount of phosphorylated substrate. Data were
normalised e reaction without inhibitor = 0% inhibition, all other assay components but no
enzyme = 100% tion), and ICso values were calculated by a 4-parameter fit using an se
10 re.
ICso values for individual compounds of the invention from this assay are listed in Table 1A below:
Table 1A
Example N0. FGFR-l (high ATP) Example N0. FGFR-l (high ATP)
IC50 [nM] ICso [nM]
1 12.2 15 1.0
16 12.5
17 0.9
18 0.7
19 0.5
20 25.0
21 4.2
22 0.9
23 17.9
24 1.3
25 0.7
26 0.9
27 1.3
28 2.1
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—209—
Example No. FGFR—l (high ATP) Example No. FGFR—l (high ATP)
IC50 [nM] IC50 [nM]
1.6 56 2.4
2.8 57 3.2
1.5 58 6.8
5.2 59 3.8
1.0 60 16.2
61 0.5
62 3.1
64 1.0
65 5.6
66 1.6
67 5.0
68 27.0
69 55.3
70 39.1
71 2.7
72 1.4
73 4.4
74 4.0
75 4.1
76 2.8
77 1.4
78 1.7
79 12.6
80 1.3
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—210—
Example No. FGFR—l (high ATP) Example No. FGFR—l (high ATP)
IC50 [nM] IC50 [nM]
1.9 105 8.7
3.4 106 6.4
107 9.4
108 3.9
109 8.4
110 17.5
111 27.0
112 42.1
113 52.7
114 11.2
115 24.9
116 3.7
117 8.8
118 6.8
119 9.0
120 6.8
121 8.2
122 18.9
123 25.1
124 27.3
125 5.0
126 3.9
127 8.0
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—211—
Selected 8-amino-l-(benzothiophen—2-yl)imidazo[1,5-a]pyrazine derivatives and related compounds
which were regarded to be representative of t prior art (see Int. Pat. Appl. WO 2007/061737-
A2 and example compounds described therein) were synthesized ing the published procedures
and also tested in the FGFR-l high ATP assay for comparative purposes. ICso values that were
obtained for these compounds are listed in Table 1B below:
Table 1B
Structure of Example No. in FGFR—l (high ATP)
comparative compound WO 2007/061737 ICso [nM]
S 4 12000
\
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Structure of e No. in FGFR-l (high ATP)
comparative nd WO 2007/061737 ICso [nM]
205 20000
ICHZ}
O
\
NHZ o
N/ /
RN?“
210 456
HSC
\
NH2 S
N/ /
Rwy/N
233 4600
CI
\
NH2 s
N/ /
g?
The ICso values specified in Table 1A and 1B demonstrate that the compounds of the present inven-
tion are about five to a thousand times more potent in inhibiting FGFR-l kinase activity than the
selected prior art nds.
B-2. FGFR—3 kinase assay
FGFR-3 inhibitory activity of the compounds of the present invention after their pre—incubation with
FGFR-3 was quantified employing the TR—FRET based FGFR-3 assay as described in the following
paragraphs:
A recombinant tagged FGFR-3 fusion protein [fusion of hione-S-transferase (GST) (N—ter-
10 minally), ag, thrombin cleavage site, and the intracellular part of human FGFR-3 from amino
acids R397 to T806 as in NCBI/Protein entry 133.1], expressed in SF9 insect cells using
alovirus expression system and purified via glutathione-S-transferase affinity chromatography,
was purchased from Proqinase (product no. 10681) and used as enzyme. As substrate for the
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kinase reaction, the biotinylated peptide -Ahx-AAEEEYFFLFAKKK (C-terminus in amide
form) was used which can be purchased, e.g., from Biosyntan (Berlin-Buch, y).
Usually, test compounds were tested on the same microtiter plate at 11 different concentrations in the
range of 20 uM to 0.1 nM (e.g. 20 uM, 5.9 uM, 1.7 uM, 0.51 uM, 0.15 uM, 44 nM, 13 nM,
3.8 nM, 1.1 nM, 0.33 nM, and 0.1 nM) in duplicates for each concentration. The dilution series was
prepared tely prior to the assay as 100—fold concentrated stock solutions in DMSO; exact
concentrations could vary depending on the pipettor used. For the assay, 50 n1 of each stock on
of the test compound in DMSO was pipetted into a black, low-volume 384-well microtiter plate
(Greiner Bio-One, Frickenhausen, Germany). 2 pl of a solution of the above FGFR-3 fusion protein
10 in aqueous assay buffer [8 mM MOPS pH 7.0, 10 mM magnesium acetate, 1.0 mM dithiothreitol,
0.05% (w/v) bovine serum albumin (BSA), 0.07% (v/v) Tween-20, 0.2 mM EDTA] was added, and
the mixture was incubated for 15 min at 22°C to allow pre-binding of the test compound to the
enzyme. Then, the kinase reaction was started by the addition of 3 ul of a solution of adenosine
triphosphate (ATP, 16.7 HM; final concentration in the 5 ul assay volume = 10 nM) and substrate
15 (0.8 uM; final concentration in the 5 ul assay volume = 0.5 nM) in assay buffer, and the resulting
e was incubated for a reaction time of 60 min at 22°C. The tration of FGFR—3 fusion
n was adjusted depending on the activity of the enzyme lot and was chosen appropriately to
have the assay in the linear range (typical concentrations were in the range of 0.03 ug/ml). The
reaction was stopped by the on of 5 ul of a solution of HTRF detection reagents [100 nM
20 streptavidin—XL665 (Cis Biointernational) and 1 nM PT66-Tb-cryptate, a terbium—cryptate labelled
hosphotyrosine antibody (Cis Biointernational; PT66-Eu-chelate from Perkin-Elmer may be
used instead), in an aqueous EDTA solution (50 mM EDTA, 0.1% (w/v) BSA in 50 mM
HEPES/NaOH pH 7.5)].
The resulting mixture was incubated for 1 h at 22°C to allow formation of the complex between the
25 phosphorylated biotinylated peptide and the detection reagents. Subsequently, the amount of
phosphorylated substrate was evaluated by measurement of the resonance energy transfer from the
late to the streptavidin—XL665. For this, the fluorescence emissions at 620 nm and 665 nm
after tion at 350 nm were measured in a TR-FRET reader [e.g. Rubystar (BMG Labtech—
nologies, Offenburg, y) or Viewlux (Perkin-Elmer)]. The ratio of the emissions at 665 nm
30 and at 620 nm was taken as the measure for the amount of phosphorylated substrate. Data were
normalised (enzyme reaction without inhibitor = 0% tion, all other assay components but no
enzyme = 100% inhibition), and ICso values were calculated by a meter fit using an in—house
a...
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—214—
IC50 values for individual compounds of the invention from this assay are listed in Table 2A below:
Table 2A
Example N0. FGFR-3 IC50 [nM] Example N0. FGFR-3 ICso [nM]
1 24.8 24 5.7
2 29.4 25 5.2
3 46.6 26 4.9
27 12.6
28 9.7
29 2.5
30 6.4
31 13.3
32 52.3
33 7.2
34 10.5
35 65.4
36 9.8
37 34.6
38 18.8
39 4.9
40 7.9
41 7.2
42 18.4
43 32.4
44 6.1
45 9.7
23 41.9 46 8.1
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Example N0. FGFR-3 ICso [nM] Example No. FGFR-3 ICso [nM]
47 3.4 77 3.8
48 78 2.0
51 79 17.9
52 80 0.2
53 81 0.5
82 16.0
83 2.1
84 16.5
85 26.0
86 6.8
87 28.1
90 11.0
91 31.1
93 8.7
95 28.7
98 26.5
99 36.9
102 39.8
106 7.1
107 17.4
108 7.7
114 9.6
117 5.3
119 4.5
121 24.6
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—216—
Selected 8-amino-l-(benzothiophen—2-yl)imidazo[1,5-a]pyrazine derivatives and related compounds
which were regarded to be representative of closest prior art (see Int. Pat. Appl. WO 2007/061737-
A2 and example compounds described therein) were synthesized following the published ures
and also tested in the FGFR-3 assay for comparative purposes. ICso values that were obtained for
these compounds are listed in Table 2B below:
Table 2B
Structure of e No. in FGFR-3
comparative compound WO 2007/061737 ICso [nM]
S 4 2400
\
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Structure of Example No. in FGFR-3
ative compound WO 2007/061737 ICso [nM]
205 20000
ICHZ}
O
\
NH, o
N/ /
RN?“
210 554
HSC
\
NH2 S
N/ /
e?
233 10000
CI
\
NH, s
N/ /
g?
The ICso values specified in Table 2A and 2B demonstrate that the compounds of the present inven-
tion are about three to a thousand times more potent in inhibiting FGFR-3 kinase activity than the
selected prior art compounds.
B-3. FGFR—4 high ATP kinase assay
FGFR-4 inhibitory activity at high ATP concentration of the compounds of the t invention
after their pre-incubation with FGFR-4 was fied employing the TR-FRET based FGFR—4 high
ATP assay as described in the following paragraphs:
A recombinant tagged FGFR-4 fusion protein [fusion of glutathione-S-transferase (GST) (N—ter-
10 minally), His6-tag, thrombin cleavage site, and the intracellular part of human FGFR-4 from amino
acids R391 to T802 as in GenBank entry NM_002011], sed in SF9 insect cells using baculo-
Dexpression system and purified via glutathione-agarose y chromatography, was pur-
chased from Proqinase (product no. 0127—0000—3) and used as enzyme. As substrate for the kinase
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—218—
reaction, the biotinylated peptide biotin-Ahx-AAEEEYFFLFAKKK (C-terminus in amide form) was
used which can be purchased, e. g., from Biosyntan (Berlin-Buch, Germany).
Usually, test compounds were tested on the same microtiter plate at 11 different concentrations in the
range of 20 uM to 0.1 nM (e.g. 20 ”M, 5.9 uM, 1.7 ”M, 0.51 ”M, 0.15 ”M, 44 nM, 13 nM,
3.8 nM, 1.1 nM, 0.33 nM, and 0.1 nM) in duplicates for each concentration. The on series was
prepared separately prior to the assay as 100—fold concentrated stock solutions in DMSO; exact
concentrations could vary depending on the pipettor used. For the assay, 50 n1 of each stock solution
of the test compound in DMSO was pipetted into a black, low-volume 384-well microtiter plate
(Greiner Bio-One, Frickenhausen, Germany). 2 ul of a solution of the above FGFR-4 fusion protein
10 in aqueous assay buffer [8 mM MOPS pH 7.0, 10 mM magnesium acetate, 1.0 mM dithiothreitol,
0.05% (w/v) bovine serum albumin (BSA), 0.07% (v/v) Tween-20, 0.2 mM EDTA] was added, and
the e was incubated for 15 min at 22°C to allow nding of the test compound to the
. Then, the kinase reaction was started by the addition of 3 ul of a solution of adenosine
triphosphate (ATP, 3.3 mM; final concentration in the 5 ul assay volume = 2 mM) and substrate
15 (0.8 uM; final concentration in the 5 ul assay volume = 0.5 nM) in assay buffer, and the resulting
e was incubated for a reaction time of 60 min at 22°C. The tration of FGFR—4 fusion
n was adjusted depending on the activity of the enzyme lot and was chosen appropriately to
have the assay in the linear range (typical concentrations were in the range of 0.03 ). The
reaction was stopped by the addition of 5 pl of a solution of HTRF detection reagents [100 nM
20 streptavidin—XL665 (Cis Biointernational) and 1 nM PT66-Tb-cryptate, a terbium—cryptate labelled
anti-phosphotyrosine antibody (Cis Biointernational; PT66-Eu-chelate from Perkin-Elmer may be
used instead), in an aqueous EDTA solution (50 mM EDTA, 0.1% (w/v) BSA in 50 mM
HEPES/NaOH pH 7.5)].
The resulting mixture was incubated for 1 h at 22°C to allow formation of the complex between the
25 phosphorylated biotinylated peptide and the ion reagents. uently, the amount of
phosphorylated substrate was evaluated by measurement of the resonance energy er from the
Tb-chelate to the streptavidin—XL665. For this, the fluorescence ons at 620 nm and 665 nm
after excitation at 350 nm were measured in a TR-FRET reader [e.g. Rubystar (BMG Labtech—
es, Offenburg, Germany) or Viewlux (Perkin-Elmer)]. The ratio of the emissions at 665 nm
30 and at 620 nm was taken as the measure for the amount of phosphorylated substrate. Data were
normalised (enzyme reaction without inhibitor = 0% inhibition, all other assay components but no
enzyme = 100% inhibition), and ICso values were calculated by a 4-parameter fit using an in—house
awe.
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B-4. mTOR kinase assay (tor comQarative gurgosest
mTOR inhibitory activity of the compounds of the present invention was fied employing the
TR-FRET based mTOR assay as described in the following paragraphs:
inant fusion tagged mTOR protein [glutathione-S—transferase (GST) fused to human mTOR
amino acids from 1360 to 2549], expressed in insect cells and purified by glutathione—sepharose
affinity chromatography, was purchased fiom Invitrogen (Cat-No. 4753) and used as enzyme. As
ate for the kinase on, a recombinant fusion protein of GFP and 4E-BP1 (purchased from
Invitrogen, . PV4759) was used.
Test compounds were dissolved in DMSO to generate 10 mM stock solutions. These solutions were
10 first 10-fold diluted by 100% DMSO to get 1 mM solutions in 100% DMSO, then 100—fold diluted
by 50% DMSO to get 10 uM solutions in 50% DMSO.
For the assay, 0.5 ul of a 10 uM solution of the test compound in 50% DMSO was pipetted into a
black, low-volume 384-well microtiter plate (Greiner Bio-One, Frickenhausen, Germany). 2 ul of a
solution of the above mTOR fusion n in s assay buffer [50 mM NaOH pH 7.5,
15 5 mM magnesium chloride, 1.0 mM dithiothreitol, 1 mM EGTA, 0.01% (v/v) Triton-X100, 0.01%
(wfv) bovine serum albumin (BSA)] was added, and the mixture was incubated for 15 min at 22°C
to allow pre-binding of the test compound to the enzyme. Then, the kinase reaction was started by
the addition of 2.5 ul of a solution of adenosine triphosphate (ATP, 80 uM; final concentration in
the 5 ul assay volume = 40 nM) and substrate (0.6 uM; final concentration in the 5 ul assay volume
20 = 0.3 nM) in assay buffer, and the resulting mixture was incubated for a reaction time of 60 min at
22°C. The concentration of mTOR fusion protein was chosen appropriately to have the assay in the
linear range (a typical final concentration in the 5 ul assay volume was 1.25 ng/ul). The reaction
was stopped by the addition of 5 ul of 30 mM EDTA (final concentration in the 10 ul assay volume
= 15 mM) and 2 nM Tb-chelate labelled anti-4E-BP1 [pT46] phosphospecific antibody rogen
25 Cat-No. PV4755] (final concentration in the 10 ul assay volume = 1 nM) in FRET buffer.
The resulting e was incubated for 1 h at 22°C to allow formation of the complex between the
phosphorylated substrate and the Tb-chelate labelled dy. Subsequently, the amount of
phosphorylated substrate was evaluated by measurement of the resonance energy transfer fiom the
Tb—chelate to the GFP. For this, the fluorescence emissions at 495 nm and 520 nm after excitation at
30 340 nm was measured in an Envision 2104 multilabel reader (Perkin-Elmer). The ratio of the
Dsions at 520 nm and at 495 nm was taken as the measure for the amount of phosphorylated
ate. Data were normalised (enzyme reaction without inhibitor = 0% inhibition, all other assay
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components but no enzyme = 100% inhibition), and either mean values (if tested in replicates at a
single tration) or ICso values (by a 4—parameter fit using an in—house software) were
calculated.
Mean inhibition values at 1 uM for individual compounds of the present invention are listed in
Table 3 below:
Table 3
Example No. mTOR Example No. mTOR
% tion @ 1 ”M % inhibition @ 1 ”M
1 8.7 22 17.6
2 7.2 23 11.6
3 8.2 24 6.3
5 9.7 25 3.5
6 0.3 26 6.8
3.1 27 5.9
7.8 28 no inhib. effect detect.
no inhib. effect detect. 29 28.5
6.0 30 21.1
31 16.3
32 1.6
33 0.9
34 25.9
35 1.4
6.7 36 14.4
no inhib. effect detect. 37 8.6
17.6 38 20.8
31.3 39 11.5
40 0.1
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Example No. mTOR Example No. mTOR
% inhibition @ 1 ”M % inhibition @ l ”M
no inhib. effect detect. 69 8.7
no inhib. effect detect. 70 5.8
10.1 71 0.1
13.3 72 8.2
15.5 73 18.5
74 18.6
75 10.2
76 8.5
77 0.7
78 5.8
79 14.7
80 3.9
81 4.1
82 7.1
83 6.3
84 9.1
85 0.9
87 12.7
88 5.3
89 no inhib. effect detect.
93 12.5
98 no inhib. effect detect.
99 5.3
103 no inhib. eflect detect.
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Example No. mTOR Example No. mTOR
% inhibition @ 1 uM % inhibition @ 1 nM
no inhib. effect detect. 119 no inhib. effect detect.
8.5 121 no inhib. effect detect.
(no inhib. effect detect. = no inhibitory effect detectable at 1 uM).
The data in Table 3 show that the compounds of the present invention only have a weak, if any,
inhibitory effect on mTOR kinase which is not considered to contribute to the pharmacological
activity observed with these compounds.
B-5. Inhibition of growth factor-mediated cell proliferation
Human cal vein endothelial cells (HUVEC) were obtained from Cellsystems (FC-0003) and
grown in Vasculife VEGF complete medium (Cellsystems, LL-1020) containing 2% fetal bovine
serum (FBS) at 37°C and 5% C02. The cells were used for proliferation assays up to passage 7.
The HUVEC cells were harvested using accutase (PAA, L11-007) and seeded in columns 2 to 12 of
10 96-well plates n EST tissue culture plate 96-well flat bottom, BD 353075, or
”CLEAR-PLATE, black, 96-well, r Bio-One, No. 655090) at a cell density of 2500 cells/
well in 100 pl ife VEGF complete medium with column 1 remaining empty as blank. Cells
were allowed to incubate at 37°C and 5% CO2 for at least 6 h. Then, the cells were washed once
with PBS and starved overnight in Vasculife basal medium (Cellsystems, LM-0002) containing
15 heparin, ate and L-glutamine (components of the Vasculife Life Factors Kit, Cellsystems, LL-
1020) as well as 0.2% FBS.
After about 18 h, the starving medium was discarded, and the cells were exposed for 72 h to
9 consecutive log or half-log concentrations of test compound in the range of 10 pM to 30 11M and to
5, 10 or 20 ng/ml hFGF-2 (recombinant human FGF basic, R&D Systems, 233—FB) in 100 pl
20 starving medium. 10 mM stock solutions of test compounds in DMSO were diluted to 200 X final
concentration in DMSO ing in a final DMSO concentration of 0.5% in all wells. Controls con-
sisted of cells grown in starving medium only and of cells grown in hFGF-2 containing starving
medium with 0.5% DMSO. To determine cell proliferation, 5 ul Alamar Blue solution (Biosource,
DALl 100) was added to each well (1 :20 dilution), and the cells were d to incubate for further
25 4h at 37°C and 5% C02 before measuring cence (ex. 535 nm, em. 595 nm) with a
atrafluor Plus Tecan plate reader (XFLUOR4 version 4.20). In some experiments, an ATP
Determination Kit (BIAFFIN GmbH, LBR—T100) was used according to the manufacturer's in-
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structions. In each experiment, samples were d in triplicate, and the standard deviations were
determined. GraphPad Prism 5 software was used to analyze the data and to obtain IC50 values. All
test compounds were assayed 2 to 10 times in ndent experiments and similar results were
obtained.
The data listed in Table 4 below represent the IC50 values for representative compounds of the
invention resulting from the corresponding averaged pIC50 :
Table 4
Example N0. hFGF—2 mediated Example N0. hFGF—2 mediated
HUVEC proliferation, HUVEC proliferation,
IC50 [nM] IC50 [nM]
16.4 48 360.0
17.5 51 1.2
5.3 52 4.0
9.7 53 3.3
54 2.2
56 18.1
57 3.2
59 51.1
60 250.0
64 4.5
67 12.1
68 14.4
71 5.4
72 1.6
73 5.5
74 0.2
46 84.5 75 1.5
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Example No. hFGF—Z mediated Example No. hFGF—2 mediated
HUVEC eration, HUVEC proliferation,
IC50 [nM] ICso [nM]
1.5 84 46.6
3.2 85 126.0
3.5
1.6
Most compounds of the t invention displayed about ten— to hundred-fold reduced inhibitory
activity in this proliferation assay when vascular endothelial growth factor (VEGF-Ams isoform) was
used as mediating growth factor (instead of FGF-Z), indicating a significant selectivity of these
compounds for FGFR versus VEGFR kinases.
B-6. Human xenograft and syngeneic tumor models
Different tumor models have been conducted in order to profile compounds of the present invention
in viva. Human, rat or mouse tumor cells were ated in vitro and implanted into either
immunodeficient or competent mice, or immunodeficient rats. Treatment started after tumor
10 establishment, and tumor-bearing animals were treated with substances via different routes (per os,
intravenously, intraperitoneally or subcutaneously). Substances were tested as mono-therapy or in
combination therapy with other cological substances. Treatment of the tumor—bearing
s was conducted until the tumors reached an average size of 120 m2. Tumors were measured
in two dimensions using a caliper, and tumor volume was calculated ing to the formula (length
15 x width2)/2. Substance efficacy was evaluated at the end of the experiment using the T/C ratio [T =
final tumor weight in the d group; C = final tumor weight in the control group]. Statistical
significance of the efficacy between control and treated groups was determined using the ANOVA
variance test. All animal studies were conducted according to the German regulatory guidelines.
Although the invention has been disclosed with reference to specific embodiments, it is apparent that
20 other embodiments and variations of the invention may be devised by others skilled in the art t
fining from the true spirit and scope of the invention. The claims are intended to be construed tode all such embodiments and equivalent variations.
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C. Examples relating to Pharmaceutical Compositions
Pharmaceutical compositions according to the present invention can be illustrated as follows:
Sterile i.V. solution:
A 5 mg/mL solution of the d compound of the invention can be made using sterile, injectable
water, and the pH is adjusted if necessary. The solution is diluted for administration to 1—2 mg/mL
with sterile 5% dextrose and is administered as an iv. infusion over about 60 minutes.
Lyophilized powder for i.v. administration:
A sterile preparation can be prepared with (1') 100—1000 mg of the desired compound of the inven-
tion as a lyophilized powder, (ii) 32—327 mg/mL sodium citrate, and (iii) 300—3000 mg Dextran 40.
10 The formulation is tituted with sterile, injectable saline or 5% dextrose to a concentration of
10 to 20 mg/mL, which is r diluted with saline or 5% dextrose to 0.2 to 0.4 mg/mL, and is
administered either as iv. bolus or by iv. infusion over 15—60 minutes.
Intramuscular sion:
The following solution or suspension can be prepared for intramuscular injection:
15 50 mg/mL of the d, water-insoluble compound of the invention; 5 mg/mL sodium carboxy—
methylcellulose; 4 mg/mL Tween 80; 9 mg/mL sodium chloride; 9 mg/mL benzyl alcohol.
Hard shell capsules:
A large number of unit capsules are prepared by filling rd two-piece hard n capsules
each with 100 mg of the desired, powdered compound of the invention, 150 mg of lactose, 50 mg of
20 cellulose and 6 mg ofmagnesium stearate.
Soft gelatin capsules:
A mixture of the desired compound of the invention in a ible oil, such as soybean oil, cotton-
seed oil or olive oil, is prepared and ed by means of a positive cement pump into molten
gelatin to form soft gelatin capsules containing 100 mg of the active ingredient. The capsules are
25 washed and dried. The d compound of the invention can be dissolved in a mixture of poly-
ethylene glycol, glycerin and sorbitol to prepare a water-miscible medicine mix.
D
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Tablets:
A large number of tablets are prepared by conventional procedures so that the dosage unit is 100 mg
of the desired compound of the invention, 0.2 mg of colloidal silicon dioxide, 5 mg of magnesium
stearate, 275 mg of microcrystalline cellulose, 11 mg of starch, and 98.8 mg of lactose. riate
s and non-aqueous gs may be applied to increase palatability, improve elegance and
stability, or delay absorption.
Solution or suspension for topical application to the eye (eye drops):
A sterile formulation can be prepared with 100 mg of the desired compound of the invention as a
lyophilized powder reconstituted in 5 mL of sterile saline. As vative, benzalkonium chloride,
10 thimerosal, phenylmercuric nitrate, or the like may be used in a range of about 0.001% to 1% by
weight.
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Claims (15)
1. A compound of a (I) (I), wherein R1 is hydrogen, chloro, methyl or methoxy, R2 is hydrogen or methoxy, with the o that at least one of R1 and R2 is other than hydrogen, represents chloro, (C1-C4)—alkyl, (C1-C4)-alkoxycarbonyl, 5-membered aza—heteroaryl , or the group -CH2-OR3, —CH2—NR4R5 or -C(=O)-NR4R6, n 10 R3 is hydrogen, (C1-C4)—alkyl, (C3-C6)-cycloalkyl or phenyl, (i) said (C1-C4)—alkyl is ally substituted with hydroxy, (C1—C4)- alkoxy, hydroxycarbonyl, (C1-C4)-alkoxycarbonyl, amino, amino- carbonyl, mono—(C1-C4)-alkylaminocarbonyl, di—(Cl—C4)—alkylamino- carbonyl, (C3—C6)—cycloalkyl or up to three fluoro atoms, 15 and (ii) said (C3-C6)-cycloalkyl is optionally substituted with one or two sub- stituents independently selected from the group consisting of (C1-C4)- alkyl, hydroxy and amino, and [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena —228— (iii) said phenyl is optionally substituted with one or two substituents inde- pendently selected from the group consisting of fluoro, chloro, bromo, cyano, trifluoromethyl, trifluoromethoxy, (C1-C4)-alkyl and (C1-C4)- alkoxy, is hydrogen or )-alkyl, is hydrogen, )—alkyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 4- to 6-membered heterocycloalkyl, wherein (Z) said (C1—C4)—alkyl is ally substituted with hydroxy, (C1-C4)- alkoxy, hydroxycarbonyl, (C1-C4)-alkoxycarbonyl, arninocarbonyl, 10 mono-(C1-C4)—alkylarninocarbonyl, di-(C1-C4)-alkylaminocarbonyl or )-cycloalkyl, and (ii) said )—cycloalkyl is optionally substituted with one or two sub- stituents independently selected from the group consisting of (C1—C4)— 15 alkyl, y and amino, and (iii) said 4- to 6-membered heterocycloalkyl is optionally substituted with one or two substituents independently selected from the group con- sisting of )—alkyl, hydroxy, 0X0 and amino, 20 is hydrogen, (C1-C4)—alkyl, (C3-C6)-cycloalkyl or 4- to 6-membered hetero— cycloalkyl, wherein (Z) said (C1—C4)—alkyl is optionally substituted with hydroxy, (C1-C4)- alkoxy, hydroxycarbonyl, (C1-C4)-alkoxycarbonyl, amino, amino- carbonyl, mono—(C1-C4)-alkylarninocarbonyl, -C4)-alkylarnino- 25 carbonyl or (C3—C6)-cycloalkyl, and (ii) said (C3-C6)—cycloalkyl is optionally substituted with one or two sub— stituents independently selected from the group consisting of )- alkyl, hydroxy and amino, [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena [Annotation] kirstena None set by na [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena —229— and (iii) said 4- to 6—membered cycloalkyl is optionally substituted with one or two substituents independently selected from the group con- sisting of (C1-C4)—alkyl, hydroxy, oxo and amino, or R4 and R5, or R4 and R6, respectively, are joined and, taken together with the nitrogen atom to which they are attached, form a monocyclic, saturated 4- to 7-membered heterocycloalkyl ring which may contain a second ring atom ed from N(R7) and O, and which may be substituted on 10 ring carbon atoms with one or two substituents independently ed from the group consisting of (C1-C4)-alkyl, oxo, hydroxy, amino and amino- carbonyl, and wherein R7 is hydrogen, (C1—C4)-alkyl, formyl or (C1-C4)-alkylcarbonyl, and 15 represents chloro, cyano, (C1—C4)-alkyl, or the group -CR8AR8B-OH, —CH2—NR9R10, -C(=O)-NR11R12 or -CH2—OR15, wherein R8A and R813 are independently selected from the group consisting of hydrogen, (C1- C4)-alkyl, cyclopropyl and cyclobutyl, R9 is hydrogen or (C1—C4)—alkyl, 20 R10 is hydrogen, )—alkyl, )-alkylcarbonyl, (C3-C6)-cycloalkyl or 4- to 6-membered heterocycloalkyl, wherein (i) said (C1-C4)—alkyl is optionally tuted with hydroxy, amino, aminocarbonyl, mono-(C1-C4)-alkylaminocarbonyl or di-(Cl—C4)-alkyl- aminocarbonyl, 25 and (ii) said (C3-C6)—cycloalkyl is optionally substituted with one or two sub— stituents independently selected from the group consisting of (C1-C4)- alkyl, hydroxy and amino, [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by na [Annotation] na Unmarked set by kirstena [Annotation] kirstena None set by kirstena ation] kirstena ionNone set by kirstena [Annotation] na Unmarked set by kirstena —230— and (iii) said 4- to 6—membered heterocycloalkyl is optionally substituted with one or two substituents independently selected from the group con- sisting of (C1-C4)—alkyl, y, oxo and amino, R11 is hydrogen or (C1-C4)—alkyl, R12 is hydrogen, (C1-C4)—alkyl, (C3-C6)-cycloalkyl or 4- to 6-membered hetero- cycloalkyl, wherein (i) said (C1—C4)—alkyl is optionally substituted with hydroxy, amino, aminocarbonyl, mono-(C1-C4)-alkylaminocarbonyl or di-(Cl—C4)—alkyl- 10 aminocarbonyl, and (ii) said (C3-C6)-cycloalkyl is optionally substituted with one or two sub- nts ndently selected from the group consisting of (C1—C4)- alkyl, hydroxy and amino, 15 and (iii) said 4- to 6-membered heterocycloalkyl is optionally substituted with one or two substituents independently selected from the group con- g of (C1-C4)—alkyl, hydroxy, oxo and amino, or 20 R9 and R10, or R11 and K”, respectively, are joined and, taken together with the nitrogen atom to which they are attached, form a monocyclic, saturated 4- to 7-membered heterocycloalkyl ring which may contain a second ring heteroatom selected from N(R13), O, S and S(O)2, and which may be sub- stituted on ring carbon atoms with up to three substituents independently 25 selected from the group consisting of fluoro, (C1-C4)-alkyl, oxo, hydroxy, amino and aminocarbonyl, and wherein R13 is hydrogen, (C1—C4)—a1kyl, (C3-C6)-cycloalkyl, formyl or (C1—C4)— alkylcarbonyl, [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by na [Annotation] kirstena Unmarked set by kirstena ation] kirstena None set by kirstena [Annotation] na MigrationNone set by kirstena [Annotation] na Unmarked set by kirstena —231— and R15 is (C1-C4)-alkyl, with the proviso that G1 is not chloro when G2 is chloro or cyano, or a pharmaceutically acceptable salt, hydrate and/or solvate thereof.
2. The compound of formula (1) according to Claim 1, wherein R1 is chloro, methyl or y, R2 is hydrogen or methoxy, G1 represents chloro, (C1-C4)-alkyl, (C1-C4)-alkoxycarbonyl or 5-membered aza—hetero- aryl selected from the group consisting of lyl, imidazolyl, yl, isoxazolyl 10 and oxadiazolyl, or represents the group -CH2-OR3 or -CH2-NR4R5, wherein R3 is hydrogen, (C1-C4)—alkyl or (C3-C6)-cycloalkyl, wherein said (C1-C4)-alkyl is optionally substituted with hydroxy, (C1-C4)- alkoxy, hydroxycarbonyl, (C1-C4)-alkoxycarbonyl, amino, aminocarbonyl, (C3-C6)-cycloalky1 or up to three fluoro atoms, 15 R4 is hydrogen or (C1-C4)—alkyl, R5 is hydrogen, (C1-C4)-alkyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 5- or 6-membered heterocycloalkyl, wherein (i) said (C1-C4)—alkyl is optionally tuted with hydroxy, hydroxy— carbonyl or (C3-C6)-cycloalkyl, 20 and (ii) said 5- or 6-membered heterocycloalkyl is optionally substituted with oxo, or R4 and R5 are joined and, taken together with the nitrogen atom to which they are 25 D attached, form a monocyclic, ted 4- to 6-membered heterocycloalkyl ring which may contain a second ring heteroatom selected from N(R7) and [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena —232— O, and which may be tuted on a ring carbon atom with 0x0 or hydroxy, and wherein R7 is hydrogen or (C1-C4)-alkyl, and G2 represents chloro, cyano, (C1—C4)-alkyl, or the group -CR8ARgB-OH, -CH2—NR9R1°, -C(=O)-NR11R12 or -CH2-OR15, wherein R8A and R813 are independently ed from the group consisting of hydrogen, (C1- C4)-alkyl and ropyl, is hydrogen or methyl, 10 R10 is hydrogen, (C1-C4)-alkyl, (C1-C4)-alkylcarbonyl, (C3-C6)-cycloalkyl or 5- or 6-membered cycloalkyl, wherein (i) said (C1-C4)—alkyl is optionally substituted with y or amino- carbonyl, and 15 (ii) said 5- or 6-membered heterocycloalkyl is optionally substituted with oxo, is hydrogen or methyl, is hydrogen, (C1-C4)—alkyl, (C3-C6)-cycloalkyl or 5- or 6-membered hetero- cycloalkyl, wherein 20 (i) said (C1—C4)—alkyl is ally substituted with hydroxy, and (ii) said 5- or 6-membered heterocycloalkyl is optionally substituted with oxo, 01' 25 R9 and R10, or R11 and K”, tively, are joined and, taken together with the nitrogen atom to which they are attached, form a monocyclic, saturated 4- to [Annotation] kirstena None set by na ation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by na ation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena —233— 6-membered heterocycloalkyl ring which may contain a second ring heteroatom ed from N(R13), O, S and S(O)2, and which may be sub- stituted on ring carbon atoms with up to three tuents independently selected from the group consisting of fluoro, (C1-C4)-alkyl, oxo, hydroxy, amino and aminocarbonyl, and wherein R13 is en, (C1-C4)-alkyl, cyclopropyl, cyclobutyl, formyl or (C1-C4)-a1kylcarbonyl, and R15 is methyl or ethyl, 10 with the proviso that G1 is not chloro when G2 is chloro or cyano, or a pharmaceutically acceptable salt, hydrate and/or solvate thereof.
The compound of formula (1) according to Claim 1 or 2, wherein is methyl, is methoxy, 15 represents methyl, oxazol-S—yl or the group -CH2-OR3 or -CH2-NR4R5, wherein R3 is hydrogen, (C1-C4)—alkyl, cyclopropyl or cyclobutyl, wherein said (C1-C4)—alkyl is optionally substituted with hydroxy, methoxy, ethoxy, hydroxycarbonyl, methoxycarbonyl, ethoxycarbonyl, amino, amino- carbonyl, cyclopropyl, cyclobutyl or up to three fluoro atoms, 20 is hydrogen, methyl or ethyl, is hydrogen, (C1-C4)—alkyl, acetyl, cyclopropyl, cyclobutyl or 2—oxopyrroli- dinyl, wherein said (C1-C4)—alkyl is optionally tuted with hydroxy, hydroxy— carbonyl, cyclopropyl or cyclobutyl, 01‘ [Annotation] kirstena None set by kirstena [Annotation] kirstena MigrationNone set by kirstena [Annotation] kirstena Unmarked set by kirstena ation] kirstena None set by kirstena [Annotation] kirstena ionNone set by kirstena [Annotation] kirstena Unmarked set by kirstena —234— R4 and R5 are joined and, taken er with the nitrogen atom to which they are attached, form a monocyclic, saturated 5- or 6-membered heterocycloalkyl ring which may n a second ring heteroatom selected from NH and O, and which may be substituted on a ring carbon atom with oxo or hydroxy, and represents methyl or the group —CR8AR8B-OH, -CH2-NR9R10 or —NRHR12, wherein RSA and R813 are independently hydrogen or methyl, R9 is en, 10 R10 is hydrogen, (C1-C4)—alkyl, acetyl, cyclopropyl, cyclobutyl or 2-oxopyrroli- dinyl, wherein said (C1-C4)—alkyl is optionally substituted with hydroxy or amino- carbonyl, R11 is hydrogen or methyl, 15 is hydrogen, (C1-C4)—alkyl, cyclopropyl, utyl or 2-oxopyrrolidinyl, wherein said (C1-C4)—alkyl is optionally substituted with hydroxy, 01‘ R9 and R10, or R11 and R12, respectively, are joined and, taken together with the nitrogen atom to which they are attached, form a monocyclic, saturated 4- to 20 6-membered heterocycloalkyl ring which may contain a second ring heteroatom selected from N(R13), O and S(O)2, and which may be substi- tuted on ring carbon atoms with up to three substituents independently selected from the group consisting of fluoro, , oxo, hydroxy, amino and aminocarbonyl, and wherein 25 R13 is hydrogen, formyl or acetyl, D or a pharmaceutically acceptable salt, hydrate and/or e thereof.
4. The compound of formula (1) according to Claim 1, 2 or 3, wherein R1 is methyl, R2 is methoxy, G1 represents the group -CH2-OR 3, wherein R3 is (C1-C4)-alkyl optionally substituted with y, amino or aminocarbo- 5 nyl, and G2 represents the group -CH2-NR 9R10 or -C(=O)-NR11 R12 , wherein R9 is hydrogen, R10 is 2-oxopyrrolidinyl, 10 or R9 and R10 are joined and, taken together with the nitrogen atom to which they are attached, form a piperazinyl, 3-oxopiperazinyl or 4-acetylpiperazin- 1-yl ring, R11 is hydrogen, 15 R12 is 2-oxopyrrolidinyl, or R11 and R12 are joined and, taken together with the en atom to which they are attached, form a oxyazetidinyl, 4-hydroxypiperidinyl or iperazinyl ring, 20 or a pharmaceutically acceptable salt, hydrate and/or solvate thereof.
5. The compound of formula (I) according to any one of claims 1 to 4, wherein the compound is 4-{[4-amino(methoxymethyl)(7-methoxymethylbenzothiophen yl)pyrrolo[2,1-f][1,2,4]triazinyl]methyl}piperazinone, 7915464_1 (GHMatters) P97075.NZ H C 3 CH 3 O NH S 2 O CH N 3 N N N NH O or a pharmaceutically acceptable salt, hydrate, or solvate thereof.
6. The compound of formula (I) according to any one of Claims 1 to 4, wherein the 5 compound is 4-{[4-amino(methoxymethyl)(7-methoxymethylbenzothiophen yl)pyrrolo[2,1-f][1,2,4]triazinyl]methyl}piperazinone, H C 3 CH 3 O NH S 2 O CH N 3 N N N NH O .
7. s for preparing a compound of formula (I) as defined in any one of Claims 1 to 6, 10 characterized in that [A] a tituted 4-aminopyrrolo[2,1-f][1,2,4]triazine of formula (II) 7915464_1 (GHMatters) P97075.NZ NH 2 O R3 N N N (II), wherein R3 has the meaning indicated in any one of Claims 1 to 4, is at first reacted with formaldehyde and an amine of formula (III) R9 HN R10 (III), 5 wherein R9 and R10 have the meanings ted in any one of Claims 1 to 4, in the presence of an acid to give a compound of formula (IV) NH 2 O R3 N N N R9 N R10 (IV), wherein R3, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, then brominated to a compound of formula (V) NH 2 Br O R3 N N N R9 N R10 (V), 10 wherein R3, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, and subsequently coupled with a benzothiophenyl boronate of formula (VI) 4_1 (GHMatters) P97075.NZ R1 O R14 B S O R14 R2 (VI), wherein R1 and R2 have the meanings indicated in any one of Claims 1 to 4, and R14 ents hydrogen or (C1-C4)-alkyl, or both R14 residues are linked together to 5 form a -(CH2)2-, -C(CH3)2-C(CH3)2-, -(CH2)3-, (CH3)2-CH2- or -C(=O)-CH2-N(CH3)-CH2-C(=O)- bridge, in the presence of a palladium catalyst and a base to yield the target compound of formula (I-A) R1 R2 NH S 2 O R3 N N N R9 N R10 (I-A), 10 wherein R1, R2, R3, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, or [B] a 6-substituted 4-aminopyrrolo[2,1-f][1,2,4]triazine of formula (II) NH 2 O R3 N N N (II), 7915464_1 (GHMatters) P97075.NZ wherein R3 has the g indicated in any one of Claims 1 to 4, is at first formylated with N,N-dimethylformamide in the presence of phosphoryl chloride to an aldehyde of formula (VII) NH 2 O R3 N N N O H (VII), 5 wherein R3 has the meaning indicated in any one of Claims 1 to 4, then brominated to a compound of formula (VIII) NH 2 Br O R3 N N N O H (VIII), wherein R3 has the meaning indicated in any one of Claims 1 to 4, and subsequently coupled with a hiophenyl boronate of formula (VI) R1 O R14 B S O R14 10 R2 (VI), wherein R1, R2 and R14 have the meanings indicated above, in the presence of a palladium catalyst and a base to give a compound of formula (IX) 7915464_1 (GHMatters) P97075.NZ R1 R2 NH S 2 O R3 N N N O H (IX), wherein R1, R2 and R3 have the meanings indicated in any one of Claims 1 to 4, which then is either [B-1] reacted with an amine of formula (III) R9 HN R10 (III), 5 wherein R9 and R10 have the meanings indicated in any one of Claims 1 to 4, in the presence of an acid and a reducing agent to yield the target compound of formula (I-A) R1 R2 NH S 2 O R3 N N N R9 N R10 (I-A), 10 n R1, R2, R3, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, 7915464_1 (GHMatters) P97075.NZ or [B-2] oxidized to a carboxylic acid of formula (X) R1 R2 NH S 2 O R3 N N N OH O (X), wherein R1, R2 and R3 have the gs indicated in any one of Claims 1 to 4, 5 and finally coupled with an amine of formula (XI) R11 HN R12 (XI), wherein R11 and R12 have the meanings indicated in any one of Claims 1 to 4, in the presence of a condensing agent to yield the target compound of formula (I-B) R1 R2 NH S 2 O R3 N N N R11 N O 10 R12 (I-B), 7915464_1 (GHMatters) P97075.NZ wherein R1, R2, R3, R11 and R12 have the meanings ted in any one of Claims 1 to 4, or [C] a 6-substituted 4-aminobromopyrrolo[2,1-f][1,2,4]triazine of formula (XII) NH 2 Br OH N N N (XII) 5 is at first coupled with a benzothiophenyl boronate of formula (VI) R1 O R14 B S O R14 R2 (VI), wherein R1, R2 and R14 have the meanings indicated above, in the presence of a palladium catalyst and a base to give a compound of formula 10 (XIII) R1 R2 NH S 2 OH N N N (XIII), wherein R1 and R2 have the meanings indicated in any one of Claims 1 to 4, and then reacted with formaldehyde and an amine of formula (III) R9 HN R10 (III), 4_1 (GHMatters) P97075.NZ n R9 and R10 have the gs indicated in any one of Claims 1 to 4, in the presence of an acid to yield the compound of formula (I-C) R1 R2 NH S 2 OH N N N R9 N R10 (I-C), wherein R1, R2, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, 5 which subsequently is either [C-1] oxidized to an aldehyde of formula (XIV) R1 R2 NH S 2 O N N N H N R9 R10 (XIV), wherein R1, R2, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, 10 and treated with an amine of formula (XV) R4 HN R5 (XV), 7915464_1 (GHMatters) P97075.NZ wherein R4 and R5 have the meanings indicated in any one of Claims 1 to 4, in the presence of an acid and a reducing agent to yield the target compound of formula (I-D) R1 R2 NH S 2 R4 N N R5 N N R9 N R10 (I-D), 5 wherein R1, R2, R4, R5, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, or [C-2] converted into the corresponding 6-(halomethyl) tive of formula (XVI) R1 R2 NH S 2 X N N N R9 N R10 (XVI), 10 wherein R1, R2, R9 and R10 have the meanings indicated in any one of Claims 1 to 4, and 7915464_1 ters) P97075.NZ X is chloro, bromo or iodo, and treated with an alcohol of formula (XVII) R3A OH (XVII), wherein R3A has the meaning of R3 as indicated in any one of Claims 1 to 4, 5 except for hydrogen, in the presence of a base to yield the target compound of a (I-E) R1 R2 NH S 2 O R3A N N N R9 N R10 (I-E), wherein R1, R2, R3A, R9 and R10 have the meanings indicated above, optionally followed, where appropriate, by (i) separating the compounds of formula (I) 10 thus obtained into their respective enantiomers and/or diastereomers, and/or (ii) converting the compounds of formula (I) into their respective hydrates, solvates, salts and/or hydrates or solvates of the salts by treatment with the corresponding solvents and/or acids or bases.
8. Compound as defined in any one of Claims 1 to 6 for the treatment and/or prevention of es. 15
9. Compound as defined in any one of Claims 1 to 6 for use in a method for the treatment and/or prevention of cancer and tumor es.
10. Use of a compound as defined in any one of Claims 1 to 6 for the manufacture of a ceutical composition for the treatment and/or prevention of cancer and tumor diseases. 4_1 (GHMatters) P97075.NZ
11. Pharmaceutical composition comprising a compound as defined in any one of Claims 1 to 6 and one or more pharmaceutically acceptable excipients.
12. The pharmaceutical composition of Claim 11 further comprising one or more additional therapeutic agents. 5
13. The pharmaceutical composition as defined in Claim 11 or 12 for the treatment and/or prevention of cancer and tumor diseases.
14. Method for the treatment and/or tion of cancer and tumor diseases in a non-human mammal, comprising administering to a non-human mammal in need thereof a therapeutically effective amount of one or more compounds as defined in any one of Claims 1 10 to 6, or of a ceutical composition as defined in any one of Claims 11 to 13.
15. The compound of formula (I) according to Claim 1, the process for preparing a compound of formula (I) ing to Claim 7, the use according to Claim 10, the ceutical composition according to Claim 11, or the method according to Claim 14, substantially as herein described with reference to the es. 15 7915464_1 (GHMatters) P97075.NZ
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP11193841 | 2011-12-15 | ||
EP11193841.1 | 2011-12-15 | ||
PCT/EP2012/074977 WO2013087578A1 (en) | 2011-12-15 | 2012-12-10 | Disubstituted benzothienyl-pyrrolotriazines and their use as fgfr kinase inhibitors |
Publications (2)
Publication Number | Publication Date |
---|---|
NZ625073A NZ625073A (en) | 2016-07-29 |
NZ625073B2 true NZ625073B2 (en) | 2016-11-01 |
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