NZ624513B2 - Methods for preparing anti-viral nucleotide analogs - Google Patents
Methods for preparing anti-viral nucleotide analogs Download PDFInfo
- Publication number
- NZ624513B2 NZ624513B2 NZ624513A NZ62451312A NZ624513B2 NZ 624513 B2 NZ624513 B2 NZ 624513B2 NZ 624513 A NZ624513 A NZ 624513A NZ 62451312 A NZ62451312 A NZ 62451312A NZ 624513 B2 NZ624513 B2 NZ 624513B2
- Authority
- NZ
- New Zealand
- Prior art keywords
- compound
- ethyl
- propyl
- phenoxyphosphinyl
- amino
- Prior art date
Links
- 238000000034 method Methods 0.000 title claims abstract description 29
- 230000000840 anti-viral effect Effects 0.000 title description 2
- 125000003729 nucleotide group Chemical group 0.000 title 1
- 229930024421 Adenine Natural products 0.000 claims abstract description 29
- 229960000643 adenine Drugs 0.000 claims abstract description 29
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims abstract description 29
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 claims abstract description 29
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims abstract description 29
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 claims abstract description 29
- 239000002904 solvent Substances 0.000 claims abstract description 12
- 238000002425 crystallisation Methods 0.000 claims abstract description 9
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 claims description 48
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 claims description 36
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 claims description 33
- 239000000203 mixture Substances 0.000 claims description 30
- 125000005928 isopropyloxycarbonyl group Chemical group [H]C([H])([H])C([H])(OC(*)=O)C([H])([H])[H] 0.000 claims description 25
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 claims description 18
- UNILWMWFPHPYOR-KXEYIPSPSA-M 1-[6-[2-[3-[3-[3-[2-[2-[3-[[2-[2-[[(2r)-1-[[2-[[(2r)-1-[3-[2-[2-[3-[[2-(2-amino-2-oxoethoxy)acetyl]amino]propoxy]ethoxy]ethoxy]propylamino]-3-hydroxy-1-oxopropan-2-yl]amino]-2-oxoethyl]amino]-3-[(2r)-2,3-di(hexadecanoyloxy)propyl]sulfanyl-1-oxopropan-2-yl Chemical compound O=C1C(SCCC(=O)NCCCOCCOCCOCCCNC(=O)COCC(=O)N[C@@H](CSC[C@@H](COC(=O)CCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCCCCCC)C(=O)NCC(=O)N[C@H](CO)C(=O)NCCCOCCOCCOCCCNC(=O)COCC(N)=O)CC(=O)N1CCNC(=O)CCCCCN\1C2=CC=C(S([O-])(=O)=O)C=C2CC/1=C/C=C/C=C/C1=[N+](CC)C2=CC=C(S([O-])(=O)=O)C=C2C1 UNILWMWFPHPYOR-KXEYIPSPSA-M 0.000 claims description 15
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 claims description 12
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 claims description 10
- ZWEHNKRNPOVVGH-UHFFFAOYSA-N 2-Butanone Chemical compound CCC(C)=O ZWEHNKRNPOVVGH-UHFFFAOYSA-N 0.000 claims description 9
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 claims description 9
- JRZJOMJEPLMPRA-UHFFFAOYSA-N 1-nonene Chemical compound CCCCCCCC=C JRZJOMJEPLMPRA-UHFFFAOYSA-N 0.000 claims description 8
- 230000008025 crystallization Effects 0.000 claims description 8
- 229910052751 metal Inorganic materials 0.000 claims description 7
- 239000002184 metal Substances 0.000 claims description 7
- BZLVMXJERCGZMT-UHFFFAOYSA-N Methyl tert-butyl ether Chemical compound COC(C)(C)C BZLVMXJERCGZMT-UHFFFAOYSA-N 0.000 claims description 6
- ISWSIDIOOBJBQZ-UHFFFAOYSA-N Phenol Chemical compound OC1=CC=CC=C1 ISWSIDIOOBJBQZ-UHFFFAOYSA-N 0.000 claims description 5
- JMMWKPVZQRWMSS-UHFFFAOYSA-N isopropanol acetate Natural products CC(C)OC(C)=O JMMWKPVZQRWMSS-UHFFFAOYSA-N 0.000 claims description 5
- 229940011051 isopropyl acetate Drugs 0.000 claims description 5
- GWYFCOCPABKNJV-UHFFFAOYSA-N isovaleric acid Chemical compound CC(C)CC(O)=O GWYFCOCPABKNJV-UHFFFAOYSA-N 0.000 claims description 5
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 claims description 5
- SSUJUUNLZQVZMO-UHFFFAOYSA-N 1,2,3,4,8,9,10,10a-octahydropyrimido[1,2-a]azepine Chemical compound C1CCC=CN2CCCNC21 SSUJUUNLZQVZMO-UHFFFAOYSA-N 0.000 claims description 4
- 239000013078 crystal Substances 0.000 claims description 4
- 229910052698 phosphorus Inorganic materials 0.000 claims description 4
- KYVBNYUBXIEUFW-UHFFFAOYSA-N 1,1,3,3-tetramethylguanidine Chemical compound CN(C)C(=N)N(C)C KYVBNYUBXIEUFW-UHFFFAOYSA-N 0.000 claims description 3
- WFPZOAOJEXDUGP-UHFFFAOYSA-N 2,5-dimethyl-3-piperazin-1-ylpyrazine Chemical compound CC1=CN=C(C)C(N2CCNCC2)=N1 WFPZOAOJEXDUGP-UHFFFAOYSA-N 0.000 claims description 3
- PZAUZOXWTHJXKO-UHFFFAOYSA-N 9-methyl-1,2,6,7,8,9a-hexahydropyrimido[1,2-a]pyrimidine Chemical compound C1=CCNC2N(C)CCCN21 PZAUZOXWTHJXKO-UHFFFAOYSA-N 0.000 claims description 3
- BVKZGUZCCUSVTD-UHFFFAOYSA-L Carbonate Chemical compound [O-]C([O-])=O BVKZGUZCCUSVTD-UHFFFAOYSA-L 0.000 claims description 3
- ZAFNJMIOTHYJRJ-UHFFFAOYSA-N Diisopropyl ether Chemical compound CC(C)OC(C)C ZAFNJMIOTHYJRJ-UHFFFAOYSA-N 0.000 claims description 3
- KRHYYFGTRYWZRS-UHFFFAOYSA-M Fluoride anion Chemical compound [F-] KRHYYFGTRYWZRS-UHFFFAOYSA-M 0.000 claims description 3
- XBDQKXXYIPTUBI-UHFFFAOYSA-M Propionate Chemical compound CCC([O-])=O XBDQKXXYIPTUBI-UHFFFAOYSA-M 0.000 claims description 3
- KXKVLQRXCPHEJC-UHFFFAOYSA-N acetic acid trimethyl ester Natural products COC(C)=O KXKVLQRXCPHEJC-UHFFFAOYSA-N 0.000 claims description 3
- 229960004132 diethyl ether Drugs 0.000 claims description 3
- 238000006345 epimerization reaction Methods 0.000 claims description 3
- YKYONYBAUNKHLG-UHFFFAOYSA-N n-Propyl acetate Natural products CCCOC(C)=O YKYONYBAUNKHLG-UHFFFAOYSA-N 0.000 claims description 3
- ISWSIDIOOBJBQZ-UHFFFAOYSA-M phenolate Chemical compound [O-]C1=CC=CC=C1 ISWSIDIOOBJBQZ-UHFFFAOYSA-M 0.000 claims description 3
- 229940090181 propyl acetate Drugs 0.000 claims description 3
- NQPDZGIKBAWPEJ-UHFFFAOYSA-N valeric acid Chemical compound CCCCC(O)=O NQPDZGIKBAWPEJ-UHFFFAOYSA-N 0.000 claims description 3
- 238000001556 precipitation Methods 0.000 claims description 2
- OJAJJFGMKAZGRZ-UHFFFAOYSA-N trimethyl(phenoxy)silane Chemical compound C[Si](C)(C)OC1=CC=CC=C1 OJAJJFGMKAZGRZ-UHFFFAOYSA-N 0.000 claims description 2
- 150000001875 compounds Chemical class 0.000 abstract description 8
- 239000000543 intermediate Substances 0.000 abstract description 5
- 238000010956 selective crystallization Methods 0.000 abstract description 4
- 150000002148 esters Chemical class 0.000 abstract description 2
- 239000002243 precursor Substances 0.000 abstract 2
- 230000000707 stereoselective effect Effects 0.000 abstract 2
- LDEKQSIMHVQZJK-CAQYMETFSA-N tenofovir alafenamide Chemical compound O([P@@](=O)(CO[C@H](C)CN1C2=NC=NC(N)=C2N=C1)N[C@@H](C)C(=O)OC(C)C)C1=CC=CC=C1 LDEKQSIMHVQZJK-CAQYMETFSA-N 0.000 abstract 2
- ONBQEOIKXPHGMB-VBSBHUPXSA-N 1-[2-[(2s,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-4,6-dihydroxyphenyl]-3-(4-hydroxyphenyl)propan-1-one Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1OC1=CC(O)=CC(O)=C1C(=O)CCC1=CC=C(O)C=C1 ONBQEOIKXPHGMB-VBSBHUPXSA-N 0.000 description 26
- 229940126142 compound 16 Drugs 0.000 description 26
- WREOTYWODABZMH-DTZQCDIJSA-N [[(2r,3s,4r,5r)-3,4-dihydroxy-5-[2-oxo-4-(2-phenylethoxyamino)pyrimidin-1-yl]oxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate Chemical compound O[C@@H]1[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)O[C@H]1N(C=C\1)C(=O)NC/1=N\OCCC1=CC=CC=C1 WREOTYWODABZMH-DTZQCDIJSA-N 0.000 description 25
- 229940125758 compound 15 Drugs 0.000 description 25
- 239000000243 solution Substances 0.000 description 23
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 21
- GHYOCDFICYLMRF-UTIIJYGPSA-N (2S,3R)-N-[(2S)-3-(cyclopenten-1-yl)-1-[(2R)-2-methyloxiran-2-yl]-1-oxopropan-2-yl]-3-hydroxy-3-(4-methoxyphenyl)-2-[[(2S)-2-[(2-morpholin-4-ylacetyl)amino]propanoyl]amino]propanamide Chemical compound C1(=CCCC1)C[C@@H](C(=O)[C@@]1(OC1)C)NC([C@H]([C@@H](C1=CC=C(C=C1)OC)O)NC([C@H](C)NC(CN1CCOCC1)=O)=O)=O GHYOCDFICYLMRF-UTIIJYGPSA-N 0.000 description 20
- 229940125797 compound 12 Drugs 0.000 description 20
- 238000006243 chemical reaction Methods 0.000 description 13
- WCDLCPLAAKUJNY-UHFFFAOYSA-N 4-[4-[3-(1h-pyrazol-4-yl)pyrazolo[1,5-a]pyrimidin-6-yl]phenyl]morpholine Chemical compound C1COCCN1C1=CC=C(C2=CN3N=CC(=C3N=C2)C2=CNN=C2)C=C1 WCDLCPLAAKUJNY-UHFFFAOYSA-N 0.000 description 12
- 238000002360 preparation method Methods 0.000 description 12
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 12
- -1 M CO ) Chemical compound 0.000 description 11
- GQHTUMJGOHRCHB-UHFFFAOYSA-N 2,3,4,6,7,8,9,10-octahydropyrimido[1,2-a]azepine Chemical compound C1CCCCN2CCCN=C21 GQHTUMJGOHRCHB-UHFFFAOYSA-N 0.000 description 10
- 239000002585 base Substances 0.000 description 10
- 239000002002 slurry Substances 0.000 description 10
- FYSNRJHAOHDILO-UHFFFAOYSA-N thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 10
- HVLLSGMXQDNUAL-UHFFFAOYSA-N triphenyl phosphite Chemical compound C=1C=CC=CC=1OP(OC=1C=CC=CC=1)OC1=CC=CC=C1 HVLLSGMXQDNUAL-UHFFFAOYSA-N 0.000 description 8
- 235000015497 potassium bicarbonate Nutrition 0.000 description 7
- 229910000028 potassium bicarbonate Inorganic materials 0.000 description 7
- 239000011736 potassium bicarbonate Substances 0.000 description 7
- TYJJADVDDVDEDZ-UHFFFAOYSA-M potassium hydrogencarbonate Chemical compound [K+].OC([O-])=O TYJJADVDDVDEDZ-UHFFFAOYSA-M 0.000 description 7
- 125000005843 halogen group Chemical group 0.000 description 6
- AJPJDKMHJJGVTQ-UHFFFAOYSA-M sodium dihydrogen phosphate Chemical compound [Na+].OP(O)([O-])=O AJPJDKMHJJGVTQ-UHFFFAOYSA-M 0.000 description 6
- 150000001412 amines Chemical class 0.000 description 5
- 239000012535 impurity Substances 0.000 description 5
- 239000003960 organic solvent Substances 0.000 description 5
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 4
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 4
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 4
- 239000007864 aqueous solution Substances 0.000 description 4
- MVPPADPHJFYWMZ-UHFFFAOYSA-N chlorobenzene Chemical compound ClC1=CC=CC=C1 MVPPADPHJFYWMZ-UHFFFAOYSA-N 0.000 description 4
- 238000004821 distillation Methods 0.000 description 4
- 239000010410 layer Substances 0.000 description 4
- PSHKMPUSSFXUIA-UHFFFAOYSA-N n,n-dimethylpyridin-2-amine Chemical compound CN(C)C1=CC=CC=N1 PSHKMPUSSFXUIA-UHFFFAOYSA-N 0.000 description 4
- 239000007787 solid Substances 0.000 description 4
- 238000003756 stirring Methods 0.000 description 4
- VCMJCVGFSROFHV-WZGZYPNHSA-N tenofovir disoproxil fumarate Chemical compound OC(=O)\C=C\C(O)=O.N1=CN=C2N(C[C@@H](C)OCP(=O)(OCOC(=O)OC(C)C)OCOC(=O)OC(C)C)C=NC2=C1N VCMJCVGFSROFHV-WZGZYPNHSA-N 0.000 description 4
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 3
- 239000003795 chemical substances by application Substances 0.000 description 3
- KRKNYBCHXYNGOX-UHFFFAOYSA-N citric acid Chemical compound OC(=O)CC(O)(C(O)=O)CC(O)=O KRKNYBCHXYNGOX-UHFFFAOYSA-N 0.000 description 3
- 230000002140 halogenating effect Effects 0.000 description 3
- 239000012044 organic layer Substances 0.000 description 3
- 239000011550 stock solution Substances 0.000 description 3
- QFLWZFQWSBQYPS-AWRAUJHKSA-N (3S)-3-[[(2S)-2-[[(2S)-2-[5-[(3aS,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-3-methylbutanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-4-[1-bis(4-chlorophenoxy)phosphorylbutylamino]-4-oxobutanoic acid Chemical compound CCCC(NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@@H](NC(=O)CCCCC1SC[C@@H]2NC(=O)N[C@H]12)C(C)C)P(=O)(Oc1ccc(Cl)cc1)Oc1ccc(Cl)cc1 QFLWZFQWSBQYPS-AWRAUJHKSA-N 0.000 description 2
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 2
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 2
- JWUJQDFVADABEY-UHFFFAOYSA-N 2-methyltetrahydrofuran Chemical compound CC1CCCO1 JWUJQDFVADABEY-UHFFFAOYSA-N 0.000 description 2
- CSNNHWWHGAXBCP-UHFFFAOYSA-L Magnesium sulfate Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 2
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 2
- SECXISVLQFMRJM-UHFFFAOYSA-N N-Methylpyrrolidone Chemical compound CN1CCCC1=O SECXISVLQFMRJM-UHFFFAOYSA-N 0.000 description 2
- UFWIBTONFRDIAS-UHFFFAOYSA-N Naphthalene Chemical compound C1=CC=CC2=CC=CC=C21 UFWIBTONFRDIAS-UHFFFAOYSA-N 0.000 description 2
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical compound [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 2
- XSTXAVWGXDQKEL-UHFFFAOYSA-N Trichloroethylene Chemical group ClC=C(Cl)Cl XSTXAVWGXDQKEL-UHFFFAOYSA-N 0.000 description 2
- 239000002808 molecular sieve Substances 0.000 description 2
- 229910052757 nitrogen Inorganic materials 0.000 description 2
- 239000012074 organic phase Substances 0.000 description 2
- CTSLXHKWHWQRSH-UHFFFAOYSA-N oxalyl chloride Chemical compound ClC(=O)C(Cl)=O CTSLXHKWHWQRSH-UHFFFAOYSA-N 0.000 description 2
- 229940002612 prodrug Drugs 0.000 description 2
- 239000000651 prodrug Substances 0.000 description 2
- 239000000047 product Substances 0.000 description 2
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 2
- 239000011541 reaction mixture Substances 0.000 description 2
- URGAHOPLAPQHLN-UHFFFAOYSA-N sodium aluminosilicate Chemical compound [Na+].[Al+3].[O-][Si]([O-])=O.[O-][Si]([O-])=O URGAHOPLAPQHLN-UHFFFAOYSA-N 0.000 description 2
- 229910052938 sodium sulfate Inorganic materials 0.000 description 2
- 235000011152 sodium sulphate Nutrition 0.000 description 2
- 125000001424 substituent group Chemical group 0.000 description 2
- HXJUTPCZVOIRIF-UHFFFAOYSA-N sulfolane Chemical compound O=S1(=O)CCCC1 HXJUTPCZVOIRIF-UHFFFAOYSA-N 0.000 description 2
- UBOXGVDOUJQMTN-UHFFFAOYSA-N trichloroethylene Natural products ClCC(Cl)Cl UBOXGVDOUJQMTN-UHFFFAOYSA-N 0.000 description 2
- SCYULBFZEHDVBN-UHFFFAOYSA-N 1,1-Dichloroethane Chemical compound CC(Cl)Cl SCYULBFZEHDVBN-UHFFFAOYSA-N 0.000 description 1
- LXBGSDVWAMZHDD-UHFFFAOYSA-N 2-methyl-1h-imidazole Chemical compound CC1=NC=CN1 LXBGSDVWAMZHDD-UHFFFAOYSA-N 0.000 description 1
- DFRWCJYSXGNOFD-UHFFFAOYSA-N 4,6,11-tri(propan-2-yl)-1,4,6,11-tetraza-5-phosphabicyclo[3.3.3]undecane Chemical compound C1CN(C(C)C)P2N(C(C)C)CCN1CCN2C(C)C DFRWCJYSXGNOFD-UHFFFAOYSA-N 0.000 description 1
- WFHPXSHLCFHEIA-UHFFFAOYSA-N 4,6,11-tris(2-methylpropyl)-1,4,6,11-tetraza-5-phosphabicyclo[3.3.3]undecane Chemical compound C1CN(CC(C)C)P2N(CC(C)C)CCN1CCN2CC(C)C WFHPXSHLCFHEIA-UHFFFAOYSA-N 0.000 description 1
- BTOJSYRZQZOMOK-UHFFFAOYSA-N 4-chloro-7-(4-methylphenyl)sulfonylpyrrolo[2,3-d]pyrimidine Chemical compound C1=CC(C)=CC=C1S(=O)(=O)N1C2=NC=NC(Cl)=C2C=C1 BTOJSYRZQZOMOK-UHFFFAOYSA-N 0.000 description 1
- UXVMQQNJUSDDNG-UHFFFAOYSA-L Calcium chloride Chemical compound [Cl-].[Cl-].[Ca+2] UXVMQQNJUSDDNG-UHFFFAOYSA-L 0.000 description 1
- QNAYBMKLOCPYGJ-UHFFFAOYSA-N D-alpha-Ala Natural products CC([NH3+])C([O-])=O QNAYBMKLOCPYGJ-UHFFFAOYSA-N 0.000 description 1
- QNAYBMKLOCPYGJ-UWTATZPHSA-N L-Alanine Natural products C[C@@H](N)C(O)=O QNAYBMKLOCPYGJ-UWTATZPHSA-N 0.000 description 1
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- PHSPJQZRQAJPPF-UHFFFAOYSA-N N-alpha-Methylhistamine Chemical compound CNCCC1=CN=CN1 PHSPJQZRQAJPPF-UHFFFAOYSA-N 0.000 description 1
- BVMWIXWOIGJRGE-UHFFFAOYSA-N NP(O)=O Chemical compound NP(O)=O BVMWIXWOIGJRGE-UHFFFAOYSA-N 0.000 description 1
- ABLZXFCXXLZCGV-UHFFFAOYSA-N Phosphorous acid Chemical class OP(O)=O ABLZXFCXXLZCGV-UHFFFAOYSA-N 0.000 description 1
- 238000013019 agitation Methods 0.000 description 1
- 229960003767 alanine Drugs 0.000 description 1
- 229910052783 alkali metal Inorganic materials 0.000 description 1
- 150000001340 alkali metals Chemical class 0.000 description 1
- 229910052784 alkaline earth metal Inorganic materials 0.000 description 1
- 150000001342 alkaline earth metals Chemical class 0.000 description 1
- 125000000217 alkyl group Chemical group 0.000 description 1
- 150000008064 anhydrides Chemical class 0.000 description 1
- QEGCPIMZHQJQAO-UHFFFAOYSA-N bromo(triphenyl)-$l^{5}-phosphane Chemical class C=1C=CC=CC=1P(C=1C=CC=CC=1)(Br)C1=CC=CC=C1 QEGCPIMZHQJQAO-UHFFFAOYSA-N 0.000 description 1
- 239000001110 calcium chloride Substances 0.000 description 1
- 229910001628 calcium chloride Inorganic materials 0.000 description 1
- 235000011148 calcium chloride Nutrition 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 125000001309 chloro group Chemical group Cl* 0.000 description 1
- AAHIAAMUDBLHHU-UHFFFAOYSA-N chloro(triphenyl)-$l^{5}-phosphane Chemical class C=1C=CC=CC=1P(C=1C=CC=CC=1)(Cl)C1=CC=CC=C1 AAHIAAMUDBLHHU-UHFFFAOYSA-N 0.000 description 1
- 229940125773 compound 10 Drugs 0.000 description 1
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- 150000001983 dialkylethers Chemical class 0.000 description 1
- 238000001035 drying Methods 0.000 description 1
- 230000007717 exclusion Effects 0.000 description 1
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- ZLVXBBHTMQJRSX-VMGNSXQWSA-N jdtic Chemical compound C1([C@]2(C)CCN(C[C@@H]2C)C[C@H](C(C)C)NC(=O)[C@@H]2NCC3=CC(O)=CC=C3C2)=CC=CC(O)=C1 ZLVXBBHTMQJRSX-VMGNSXQWSA-N 0.000 description 1
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 1
- 235000019341 magnesium sulphate Nutrition 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 239000002773 nucleotide Substances 0.000 description 1
- FAIAAWCVCHQXDN-UHFFFAOYSA-N phosphorus trichloride Chemical compound ClP(Cl)Cl FAIAAWCVCHQXDN-UHFFFAOYSA-N 0.000 description 1
- 238000010992 reflux Methods 0.000 description 1
- 230000000717 retained effect Effects 0.000 description 1
- 235000017557 sodium bicarbonate Nutrition 0.000 description 1
- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 239000000126 substance Substances 0.000 description 1
- DZLFLBLQUQXARW-UHFFFAOYSA-N tetrabutylammonium Chemical compound CCCC[N+](CCCC)(CCCC)CCCC DZLFLBLQUQXARW-UHFFFAOYSA-N 0.000 description 1
- 238000002560 therapeutic procedure Methods 0.000 description 1
- HFRXJVQOXRXOPP-UHFFFAOYSA-N thionyl bromide Chemical compound BrS(Br)=O HFRXJVQOXRXOPP-UHFFFAOYSA-N 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000002588 toxic effect Effects 0.000 description 1
- 125000005270 trialkylamine group Chemical group 0.000 description 1
- IARSSOVWSJAVSZ-UHFFFAOYSA-N tris(dimethylamino)sulfanium Chemical compound CN(C)[S+](N(C)C)N(C)C IARSSOVWSJAVSZ-UHFFFAOYSA-N 0.000 description 1
- 238000005292 vacuum distillation Methods 0.000 description 1
- 239000006226 wash reagent Substances 0.000 description 1
Classifications
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
- C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
- C07F9/02—Phosphorus compounds
- C07F9/547—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom
- C07F9/645—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom having two nitrogen atoms as the only ring hetero atoms
- C07F9/6509—Six-membered rings
- C07F9/6512—Six-membered rings having the nitrogen atoms in positions 1 and 3
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
- C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
- C07F9/02—Phosphorus compounds
- C07F9/547—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom
- C07F9/6558—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom containing at least two different or differently substituted hetero rings neither condensed among themselves nor condensed with a common carbocyclic ring or ring system
- C07F9/65583—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom containing at least two different or differently substituted hetero rings neither condensed among themselves nor condensed with a common carbocyclic ring or ring system each of the hetero rings containing nitrogen as ring hetero atom
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
- C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
- C07F9/02—Phosphorus compounds
- C07F9/547—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom
- C07F9/6561—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom containing systems of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring or ring system, with or without other non-condensed hetero rings
- C07F9/65616—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom containing systems of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring or ring system, with or without other non-condensed hetero rings containing the ring system having three or more than three double bonds between ring members or between ring members and non-ring members, e.g. purine or analogs
Abstract
Disclosed herein is a method for the selective crystallisation of the diasteromer 9-{(R)-2-[((S)-{[(S)-1-(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine (also known as L-alanine, N-[(S)-[[(1R)-2-(6-amino-9H-purin-9-yl)-1-methylethoxy]methyl]phenoxyphosphinyl],-1-methylethyl ester) comprising reacting a solvent, and a base with 9-{(R)-2-[((R,S)-{[(S)-1-(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine in conditions that provide for the selective crystallization. Also disclosed are methods of preparing intermediates of the compound such as the non-stereospecific precursor 9-{(R)-2-[((R,S)-{[(S)-1-(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine. ester) comprising reacting a solvent, and a base with 9-{(R)-2-[((R,S)-{[(S)-1-(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine in conditions that provide for the selective crystallization. Also disclosed are methods of preparing intermediates of the compound such as the non-stereospecific precursor 9-{(R)-2-[((R,S)-{[(S)-1-(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine.
Description
TITLE
METHODS FOR PREPARING ANTI-VIRAL
NUCLEOTIDE ANALOGS
Cross-reference to Related Application
This application claims the benefit of priority from U.S. Provisional
Patent Application No. 61/544,950, filed October 7, 2011, the content of which is
hereby incorporated by reference herein in its entirety.
BACKGROUND OF THE INVENTION
Description of Related Art
U.S. Patent Nos. 7,390,791 and 7,803,788 (the content of each of which
is incorporated by reference herein in its entirety) describe certain prodrugs of
phosphonate nucleotide analogs that are useful in therapy. One such prodrug is
9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 16):
This compound is also known by the Chemical Abstract name
L-alanine, N-[(S)-[[(1R)(6-amino-9H-purinyl)-
1-methylethoxy]methyl]phenoxyphosphinyl],methylethyl ester. U.S. Patent
Nos. 7,390,791 and 7,803,788 also disclose a monofumarate form of this
compound and its preparation method (see, e.g., Example 4).
Compound 12, compound 13 (wherein X is halo), and compound 15:
are synthetic intermediates that are useful for preparing compound 16.
Compound 15 is depicted as a mixture of diastereomers at the phosphorus center.
The two diastereomers that make up the mixture of compound 15 are shown here
as compounds 15a and 15b. Isomer 15a is identical in structure to compound 16.
Currently, there is a need for improved methods for preparing
compounds 12, 13, 15, and 16. In particular, there is a need for improved
methods for preparing compounds 13, 15, and 16 in high diastereomeric purity.
Such improved methods may provide higher yields, be easier to perform, or use less
costly or toxic reagents than currently available methods.
SUMMARY OF THE INVENTION
Described are an improved method for isolating 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 16) using crystallization-induced dynamic resolution; improved methods for
preparing compounds 13 and 15 in high diastereomeric purity; and an improved method
for preparing compound 12.
Accordingly, in one embodiment, there is provided a method comprising
subjecting a solution comprising: a) a suitable solvent; b) a suitable base; c) the
diastereomeric mixture 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine; and,
optionally, d) one or more seed crystals of 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine, to
conditions that provide for the selective crystallization of 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine.
[0007a] In another embodiment, there is provided a method comprising subjecting a
solution comprising:
a) a solvent selected from the group consisting of ethyl acetate, methyl acetate,
propyl acetate, isopropyl acetate, diethyl ether, diisopropyl ether, tetrahydrofuran,
dichloromethane, acetone, methyl ethyl ketone, methyl tert-butylether, toluene,
acetonitrile, and mixtures thereof;
b) a base selected from the group consisting of 1,5-diazobicyclo[4.3.0]nonene;
1,8-diazabicyclo[5.4.0]undecene; 7-methyl-1,5,7-triazabicyclo[4.4.0]decene;
tetramethylguanidine; a Verkade base; a metal carbonate; a metal phenoxide;
trimethyl(phenoxy)silane (PhOTMS) in combination with a fluoride ion source; and
mixtures thereof; and
c) 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine, to
- 3A -
crystallization-induced dynamic resolution using a crystal of 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine, until
epimerization of the phosphorus center and precipitation of additional crystalline
9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine occurs.
In another embodiment, there is provided a method for preparing compound
13 that is at least about 90% diastereomerically pure by treating a toluene solution of
compound 12:
with thionyl chloride to provide compound 13, where X = Cl.
In another embodiment, there is provided a method for preparing
9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 15) that is at least about 90% diastereomerically pure compound 16,
comprising treating compound 13:
(wherein X is halo) that is at least about 90% diastereomerically pure with
amine 11:
under conditions that provide compound 15 that is at least about 90%
diastereomerically pure compound 16 (i.e., isomer 15a).
In another embodiment, there is provided a method for preparing
compound 12:
comprising treating PMPA:
with triphenylphosphite in the presence of a suitable base to provide compound 12.
Also provided are novel processes and intermediates disclosed herein.
DETAILED DESCRIPTION OF THE INVENTION
Specific values listed below for radicals, substituents, and ranges, are for
illustration only; they do not exclude other defined values or other values within
defined ranges for the radicals and substituents.
Preparation of Compound 16 by Crystallization-induced Dynamic Resolution
In one embodiment, there is provided a method for the crystallization-
induced dynamic resolution of 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 15):
to provide 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 16). The method comprises subjecting a solution comprising: a) a
suitable solvent; b) a suitable base; c) 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine;
and, optionally, d) one or more seed crystals of 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine,
to conditions that provide for the epimerization of the phosphorus center, under
conditions that also provide selective crystallization of 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine.
The crystallization can be carried out in any suitable solvent. For
example, it can be carried out in an aprotic organic solvent, or in a mixture
- 5A -
[0010a] In another embodiment there is provided a method for preparing
compound 13:
wherein X is halo, that is at least about 90% diastereomerically pure, comprising treating
compound 12:
with a suitable halogenating agent until diastereomeric enrichment of compound 13 to at
least about 90% diastereomeric purity is deemed complete.
[0010b] In another embodiment there is provided a method for preparing
compound 15:
that is at least about 90% diastereomerically pure compound 16:
- 5B -
comprising treating compound 13:
wherein X is halo, that is at least about 90% diastereomerically pure, with amine 11:
under conditions that provide compound 15 that is at least about 90% diastereomerically
pure compound 16.
thereof. For example, the aprotic organic solvent may comprise ethyl acetate,
methyl acetate, propyl acetate, isopropyl acetate, diethyl ether, diisopropyl ether,
tetrahydrofuran, dichloromethane, acetone, methyl ethyl ketone, methyl
tert-butylether, toluene, or acetonitrile, or a mixture thereof. In one embodiment,
the solvent comprises acetonitrile.
The resolution can be carried out in the presence of any suitable base.
For example, the resolution can be carried out in the presence of a base selected
from 1,5-diazobicyclo[4.3.0]nonene (DBN), 1,8-diazabicyclo[5.4.0]undec-
7-ene (DBU), 7-methyl-1,5,7-triazabicyclo[4.4.0]decene (MTBD),
tetramethylguanidine, a Verkade base (e.g., 2,8,9-triisopropyl-2,5,8,9-tetraaza-
1-phosphabicyclo[3.3.3]undecane, and 2,8,9-triisobutyl-2,5,8,9-tetraaza-
1-phosphabicyclo[3.3.3]undecane), a metal carbonate (e.g., M CO ), a metal
phenoxide (M OPh), and PhOTMS in combination with a fluoride ion source
(e.g., R N F, TASF (tris(dimethylamino)sulfonium difluorotrimethylsilicate),
or TBAT (tetrabutylammonium triphenyldifluorosilicate), and mixtures thereof,
wherein each M is a suitable metal such as an alkali metal or an alkaline earth
metal, and each R is, for example, a (C -C ) alkyl. In one specific embodiment,
the base is DBU.
The resolution can also be carried out at any suitable temperature, for
example, a temperature in the range of from about 0 °C to about 50 °C. In one
specific embodiment, the resolution is carried out at a temperature of
about 20 °C.
In one specific embodiment, the resolution is carried out in the
presence of phenol.
The percentage of compound 16 in the starting diastereomeric mixture
can be anywhere in the range from about 0% to about 99%. In one embodiment
of the invention, the percentage of compound 16 in the starting diastereomeric
mixture is in the range from about 0% to about 20%. In one embodiment, the
percentage of compound 16 in the starting diastereomeric mixture is in the range
from about 20% to about 99%. In one embodiment, the percentage of
compound 16 in the starting diastereomeric mixture is in the range from about
50% to about 99%. In one embodiment, the final compound 16 is at least about
90%, about 95%, about 97%, or about 99% diastereomerically pure. In one
embodiment, the final compound 16 contains less than 1% of any diastereomeric
impurities. In one embodiment, the final compound 16 is free of any detectable
diastereomeric impurities.
Preparation of Compound 13 that has High Diastereomeric Purity
Compound 13 (wherein X is halo) that is at least about 90%
diastereomerically pure can be prepared by treating compound 12 with a suitable
halogenating agent. For example, compound 13 can be prepared by treating
compound 12 with a halogenating agent such as, for example, thionyl chloride
(SOCl ), oxalyl chloride (C O Cl ), phosphorus trichloride (PCl ), a
2 2 2 2 3
chlorotriphenylphosphorane salt, thionyl bromide (SOBr ), oxalyl bromide
(C O Br ), phosphorus tribromide (PBr ), or a bromotriphenylphosphorane salt.
2 2 2 3
The reaction can be carried out in a suitable organic solvent at a suitable
temperature (e.g., a temperature in the range from about -20 °C to about 100 °C).
Suitable solvents include tetrahydrofuran, 2-methyltetrahydrofuran,
dichloromethane, acetonitrile, toluene, chlorobenzene, 1,2-dichloroethane,
1,4-dioxane, sulfolane, and trichloroethylene, and mixtures thereof.
In one embodiment, compound 12 is treated with thionyl chloride in
toluene at a temperature of from about 22 °C to about 110 °C to provide
compound 13a:
that is at least about 90% diastereomerically pure. In one embodiment, the final
compound 13a is at least about 90%, about 95%, about 97%, or about 99%
diastereomerically pure. In one embodiment, the final compound 13a contains less
than 1% of any diastereomeric impurities. In one embodiment, the final
compound 13a is free of any detectable diastereomeric impurities.
Preparation of Compound 15 in High Diastereomeric Purity
Compound 15 can be prepared by treating compound 13 (wherein X is
halo) that is at least about 90% diastereomerically pure with amine 11 under
conditions that provide compound 15 that is at least about 90%
diastereomerically pure in the specific isomer 15a, also represented herein as
compound 16. For example, compound 15 can be prepared by treating
compound 13 with amine 11 in a suitable organic solvent at a suitable
temperature (e.g., a temperature in the range from about -78 °C to about 25 °C).
Suitable solvents include organic solvents such as tetrahydrofuran,
2-methyltetrahydrofuran, dichloromethane, 1,2-dichloroethane, trichloroethylene,
1,4-dioxane, acetonitrile, toluene, chlorobenzene, sulfolane, and isopropyl
acetate, and mixtures thereof. The reaction conveniently can be carried out in the
presence of a suitable base, such as, for example, triethylamine ((C H ) N),
2 5 3
N,N-diisopropylethylamine ([(CH ) CH] NC H ), or 1,8-bis(dimethylamino)-
3 2 2 2 5
naphthalene (proton sponge, C H N ). Following the reaction, the resulting
14 18 2
material can be washed with an aqueous solution containing a suitable wash
reagent, such as, for example, sodium phosphate monobasic (NaH PO ),
potassium bicarbonate (KHCO ), citric acid (C H O ), or sodium bicarbonate
3 6 8 7
(NaHCO ). The resulting organic solution can be dried over a suitable drying
agent, for example, sodium sulfate, magnesium sulfate, or calcium chloride to
provide compound 15 that is at least about 90% diastereomerically pure
compound 16.
In one embodiment, compound 13 that is at least about 90%
diastereomerically pure (wherein X is chloro) is treated with amine 11 in
dichloromethane at a temperature of -25 °C to 25 °C in the presence of
triethylamine. The resulting reaction mixture is then washed with an aqueous
solution containing sodium phosphate monobasic (NaH PO ) and potassium
bicarbonate (KHCO ) and dried over sodium sulfate to provide compound 15 that
is at least about 90% diastereomerically pure compound 16. In one embodiment,
the starting compound 13 and resulting compound 15 are at least about 95% or
97% diastereomerically pure. In one embodiment, the final compound 15
contains at least about 90%, about 95%, about 97%, or about 99%
diastereomerically pure compound 16. In one embodiment, the final
compound 15 contains less than 1% of any diastereomeric impurities.
Preparation of Compound 12
Compound 12 can be prepared as described in, e.g., U.S. Patent
No. 7,390,791, or it can be prepared as described herein. In one embodiment,
there is provided a method for preparing compound 12 comprising treating
PMPA with triphenylphosphite in the presence of a suitable base to provide
compound 12. The reaction conveniently can be carried out in a suitable solvent,
such as, for example, acetonitrile, N-methylpyrrolidone (NMP), dichloroethane,
pyridine, an alkyl acetate (e.g., ethyl acetate), or a dialkyl ether (e.g., diethyl
ether), or a mixture thereof. The reaction conveniently also can be carried out in
the presence of a suitable base, such as, for example, a trialkylamine (e.g.,
triethylamine), 2-methylimidazole, dimethylaminopyridine (DMAP),
1,5-diazobicyclo[4.3.0]nonene (DBN), 1,8-diazabicyclo[5.4.0]undecene
(DBU), or pyridine, or a mixture thereof. The reaction conveniently also can be
carried out at a suitable temperature, such as, for example, a temperature from
about 20 °C to about 120 °C (e.g., from about 20 °C to about 82 °C). In one
specific embodiment, PMPA is treated with triphenylphosphite in the presence of
triethylamine and dimethylaminopyridine in acetonitrile at about 80 °C to provide
compound 12.
The following are nonlimiting, illustrative Examples.
Example 1: Preparation of Diastereomeric Mixture 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(Compound 15)
1. KHCO
2. Filtration
HCl • H N 3. molecular sieves H N
DCM, rt to -20 C
11
NH NH
Cl Cl
OH Cl
CH CN
60 to 70 C
-25 C to rt
a. Preparation of Compound 11. Isopropyl L-alanine ester
hydrochloride (compound 10) (1 kg, 5.97 mol, 1.0 equiv) and potassium
bicarbonate (1.45 kg, 14.5 mol, 2.43 equiv) were agitated in DCM (4 kg) for
to 14 hours with maximum agitation, maintaining the pot temperature between
19 °C and 25 °C. The mixture was then filtered and rinsed forward with DCM
(2 kg). The filtrate was dried over a bed of 4 Å molecular sieves until the water
content of the solution was ≤ 0.05%. The resultant stock solution containing
compound 11 was then cooled to a pot temperature of -20 °C and held
for further use.
b. Preparation of Compound 13a. To a solution of thionyl chloride
(0.72 kg, 6.02 mol, 2.19 equiv) in acetonitrile (5.5 kg) at 60 °C was added
compound 12 (1 kg, 2.75 mol, 1.00 equiv) in 10 equal portions over 2 hours. The
pot temperature was then adjusted to 70 °C and stirred for 1 to 3 hours until the
reaction was deemed complete. The pot temperature was then adjusted to 40 °C
and vacuum applied. The mixture was distilled to dryness, maintaining a
maximum jacket temperature of 40 °C. The dry residue was then taken up in
dichloromethane (30 kg) and the pot temperature adjusted to 19 °C to 25 °C. The
resultant slurry containing compound 13a was held for further use.
c. Preparation of Compound 15. To the stock solution of isopropyl
L-alanine ester 11 (4.82 equiv) at -25 °C was added slurry containing
compound 13a (1.0 equiv) over a minimum of 2 hours, maintaining the pot
temperature ≤ -10 °C. The mixture was then held at a temperature ≤ -10 °C for at
least 30 minutes, then the pH checked using water wet pH paper. If the pH was
< 4, adjustment with triethylamine to pH 4–7 was performed. The pot
temperature was then adjusted to room temperature (19 °C to 25 °C). In a
separate vessel, a solution of sodium phosphate monobasic (2.2 kg, 18 mol,
6.90 equiv) in water (16 kg) was prepared. Half of the sodium phosphate
monobasic solution was charged to the phosphonamidate reactor, and vigorously
stirred. The layers were settled and partitioned. The organic layer was washed
again with the remaining half of sodium phosphate monobasic solution. In a
separate vessel, a solution of potassium bicarbonate (1.1 kg, 11 mol, 4.22 equiv)
in water (5.5 kg) was prepared. Half of the potassium bicarbonate solution was
charged to the organic phase, and vigorously stirred. The layers were settled and
partitioned. The organic layer was washed again with the remaining half of the
potassium bicarbonate solution, followed by a final water (3.3 kg) wash. The
organic phase was then retained and distilled to a volume of approximately 6 L.
The resultant solution was analyzed for water content. If the water content was
> 1.0%, DCM could be charged and the distillation to approximately 6 L
repeated. When the solution water content was less than or about 1.0%, the pot
temperature was adjusted to 19 °C to 25 °C prior to discharge of the stock
solution in DCM to provide the diastereomeric mixture 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 15). H NMR (400 MHz, CDCl ): δ 1.20 – 1.33 (m, 12H), 3.62 –
3.74 (m, 1H), 3.86 – 4.22 (m, 5H), 4.30 – 4.44 (m, 1H), 4.83 – 5.10 (m, 1H), 6.02
(br s, 3H), 7.18 – 7.34 (m, 5H), 7.98 – 8.02 (m, 1H), 8.32 – 8.36 (m, 1H); P
NMR (162 MHz, CDCl ): δ. 21.5, 22.9.
Example 2: Crystallization-induced Dynamic Resolution of Diastereomeric
Mixture 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(Compound 15) to Provide 9-{(R)[((S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(Compound 16)
A 22 wt% solution of 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 15) in acetonitrile (2.3 kg solution, 0.51 kg compound 15, 1.1 mol,
1 equiv) was charged to a vessel equipped with an overhead stirrer, distillation
apparatus, and nitrogen inlet. The mixture was concentrated by distillation at
100 to 300 mbar over a temperature range of 45 °C to 55 °C to a final
concentration of 30 to 35 wt%. The distillation apparatus was then removed and
the solution was cooled to 20 °C. The solution was seeded with 2.0%
compound 16 and allowed to stir for one hour at 20 °C. Phenol (9.9 g, 0.11 mol,
0.1 equiv) and DBU (16 g, 0.11 mol, 0.1 equiv) were added and the mixture was
stirred for an additional 24 hours, or until the weight percent of compound 16
remaining in solution was less than 12%. The slurry was then cooled to 0 °C and
stirred for an additional 18 hours at 0 °C. The slurry was filtered and washed
with a 1:1 solution of isopropyl acetate:acetonitrile (1.5 L) at 0 °C. The solids
were dried in a vacuum oven at 50 °C to give 0.40 kg of compound 16
(80% yield) as a white solid. H NMR (400 MHz, CDCl ): δ 1.21 (m, 9H), 1.28
(d, J = 7.0 Hz, 3H), 3.65 (dd, J= 13.1, 10.7, 1H) 4.00 (m, 4H), 4.33 (dd, J= 14.4,
3.1 Hz, 1H), 5.00 (m, 1H) 6.00 (bs, 2H), 6.99 (m, 2H), 7.07 (m, 1H), 7.19 (m,
2H), 7.97 (s, 1H), 8.33 (s, 1H). P NMR (162 MHz, CDCl ): δ. 20.8.
Example 3: Preparation of Compound 13a in High Diastereomeric Purity
To a slurry of compound 12 (10.0 g, 27.5 mmol, 1.00 equiv) in toluene
(60 mL) at ambient temperature was added thionyl chloride (3.0 mL, 41 mmol,
1.5 equiv). The slurry was heated to 70 °C and agitated for 48 to 96 hours until
reaction and diastereomeric enrichment were deemed complete by HPLC
(Target: > 97.0% conversion of compound 12 to compound 13a and
> 90:10 diastereomeric ratio of compound 13a). The mixture was concentrated to
dryness by vacuum distillation, and the dry residue was taken up in toluene
(50 mL). The resultant slurry containing compound 13a was held at ambient
temperature for further use.
Example 4: Preparation of 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(Compound 15) in High Diastereomeric Purity
To a solution of isopropyl L-alanine ester 11 (4.50 equiv) in DCM
(80 mL) at -25 °C was added a slurry containing compound 13a (1.00 equiv) that
is at least 90% diastereomerically pure in toluene (50 mL) over a minimum of
45 minutes, maintaining the internal temperature ≤ -20 °C. The mixture was then
held at a temperature ≤ -20 °C for at least 30 minutes, and the pH checked using
water wet pH paper. If the pH was < 4, it was adjusted with triethylamine to
pH 4 to 7. The pot temperature was adjusted to room temperature
(19 °C to 25 °C). The mixture was transferred to a separatory funnel and washed
sequentially with 10% w/v aqueous solution of sodium phosphate monobasic
(2 x 50 mL), 15% w/v aqueous solution of potassium bicarbonate (2 x 20 mL),
and water (50 mL). The final organic layer was dried over anhydrous sodium
sulfate, filtered, and concentrated in vacuo to a viscous amber oil. The oil was
dissolved in toluene/acetonitrile (4:1) (50 mL), and the solution was seeded with
9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(about 1 mg, 99:1 diastereomeric ratio) and stirred for 2 hours at ambient
temperature. The resultant slurry was filtered and the filter cake was washed with
toluene/acetonitrile (4:1) (15 mL) and dried in a vacuum oven at 40 °C for
16 hours to give the product, 9-{(R)[((R,S)-{[(S)
(isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine
(compound 15), as a white solid (10.0 g, 76.4%, 97.5:2.5 diastereomeric ratio in
favor of compound 16). H NMR (400 MHz, CDCl ): δ 1.20 – 1.33 (m, 12H),
3.62 – 3.74 (m, 1H), 3.86 – 4.22 (m, 5H), 4.30 – 4.44 (m, 1H), 4.83 – 5.10
(m, 1H), 6.02 (br s, 3H), 7.18 – 7.34 (m, 5H), 7.98 – 8.02 (m, 1H), 8.32 – 8.36
(m, 1H); P NMR (162 MHz, CDCl ): δ. 21.5, 22.9.
Example 5: Preparation of Compound 12
PMPA (100.0 g, 0.35 mol, 1 equiv) was charged to a vessel equipped
with an overhead stirrer, reflux condenser, and nitrogen inlet, followed by
acetonitrile (800 mL). To the vessel was added triethylamine (71.0 g, 0.70 mol,
2 equiv) followed by DMAP (42.6 g, 0.35 mol, 1 equiv) and triphenylphosphite
(162.1 g, 0.52 mol, 1.5 equiv). The mixture was heated to 80 °C and agitated for
≥ 48 hours at 80 °C or until the reaction was complete by P NMR. (A sample
directly from the reaction is taken and an insert containing 10% H PO in D O is
3 2 2
added. The intermediate formed is the PMPA anhydride and is at 7 to 8 ppm; the
product is at 12.3 to 12.6 ppm. The reaction is deemed complete when less than
% anhydride is present). The reaction mixture was distilled to approximately
1.5 volumes of acetonitrile and diluted with ethyl acetate (200 mL) and water
(300 mL). The aqueous layer was separated and washed with ethyl acetate
(200 mL) twice. The aqueous layer was recharged to the vessel and pH adjusted
to pH 3 using 12.1 M HCl (21.0 mL). The reaction was then seeded with 0.05%
of compound 12 and allowed to stir at 25 °C. An additional 12.1 M HCl was added over
minutes (7.0 mL) until pH 2 was achieved. The crystallization was allowed to stir at
ambient temperature for 30 minutes and then cooled to 10 °C over 2 hours. Once at
°C, the crystallization was allowed to stir for 2.5 hours at 10 °C. The slurry was
filtered and washed with pH 1.5 water (200 g). After drying in the vacuum oven, 102.2 g
of compound 12 (81% yield) was obtained as a white solid. H NMR (400 MHz, D O): δ
1.31 (d, J= 6.1 Hz, 3H), 3.59 (dd, J = 14.0, 9.0 Hz, 1H), 3.85 (dd, J= 14.0, 9.0 Hz, 1H),
4.1 (m, 1H), 4.3 (dd, J= 15.0, 9.0 Hz, 1H), 4.5 (dd, J= 15.0, 2 Hz, 1H), 6.75 (d, J= 7 Hz,
2H), 7.15 (t, J= 7 Hz, 1H), 7.25 (t, J= 7 Hz, 2H), 8.26 (s, 1H), 8.35 (s, 1H). P NMR
(162 MHz, D O): δ. 14.8.
All publications, patents, and patent documents are hereby incorporated by
reference herein, as though individually incorporated by reference. The invention has
been described with reference to various specific and preferred embodiments and
techniques. However, it should be understood that many variations and modifications
may be made while remaining within the spirit and scope of the invention.
The reference in this specification to any prior publication (or information
derived from it), or to any matter which is known, is not, and should not be taken as an
acknowledgment or admission or any form of suggestion that that prior publication (or
information derived from it) or known matter forms part of the common general
knowledge in the field of endeavour to which this specification relates.
Throughout this specification and the claims which follow, unless the context
requires otherwise, the word "comprise", and variations such as "comprises" and
"comprising", will be understood to imply the inclusion of a stated integer or step or
group of integers or steps but not the exclusion of any other integer or step or group of
integers or steps.
Claims (5)
1. A method comprising subjecting a solution comprising: a) a solvent selected from the group consisting of ethyl acetate, methyl acetate, propyl acetate, isopropyl acetate, diethyl ether, diisopropyl ether, tetrahydrofuran, dichloromethane, acetone, methyl ethyl ketone, methyl tert-butylether, toluene, acetonitrile, and mixtures thereof; b) a base selected from the group consisting of 1,5-diazobicyclo[4.3.0]nonene; 1,8-diazabicyclo[5.4.0]undecene; 7-methyl-1,5,7-triazabicyclo[4.4.0]decene; tetramethylguanidine; a Verkade base; a metal carbonate; a metal phenoxide; trimethyl(phenoxy)silane (PhOTMS) in combination with a fluoride ion source; and mixtures thereof; and c) 9-{(R)[((R,S)-{[(S) (isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine, to crystallization-induced dynamic resolution using a crystal of 9-{(R)[((S)-{[(S) (isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine, until epimerization of the phosphorus center and precipitation of additional crystalline 9-{(R)[((S)-{[(S) (isopropoxycarbonyl)ethyl]amino}phenoxyphosphinyl)methoxy]propyl}adenine occurs.
2. The method of claim 1, wherein the solvent comprises acetonitrile.
3. The method of claim 1 or 2, wherein the base is 1,8-diazabicyclo[5.4.0]undecene.
4. The method of any one of claims 1-3, wherein the solution further comprises phenol.
5. A method for preparing compound 13: H:\rec\Interwoven\NRPortbl\DCC\REC\9511856_1.docx-
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
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US201161544950P | 2011-10-07 | 2011-10-07 | |
US61/544,950 | 2011-10-07 | ||
PCT/US2012/000441 WO2013052094A2 (en) | 2011-10-07 | 2012-10-03 | Methods for preparing anti-viral nucleotide analogs |
Publications (2)
Publication Number | Publication Date |
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NZ624513A NZ624513A (en) | 2016-06-24 |
NZ624513B2 true NZ624513B2 (en) | 2016-09-27 |
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