NZ623293B2 - Neutralising antibodies to the major exotoxins tcda and tcdb of clostridium difficile - Google Patents
Neutralising antibodies to the major exotoxins tcda and tcdb of clostridium difficile Download PDFInfo
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- NZ623293B2 NZ623293B2 NZ623293A NZ62329312A NZ623293B2 NZ 623293 B2 NZ623293 B2 NZ 623293B2 NZ 623293 A NZ623293 A NZ 623293A NZ 62329312 A NZ62329312 A NZ 62329312A NZ 623293 B2 NZ623293 B2 NZ 623293B2
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
- A61K2039/507—Comprising a combination of two or more separate antibodies
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/545—Medicinal preparations containing antigens or antibodies characterised by the dose, timing or administration schedule
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K39/395—Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum
- A61K39/40—Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum bacterial
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K45/00—Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
- A61K45/06—Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/04—Antibacterial agents
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies
- C07K16/12—Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from bacteria
- C07K16/1267—Gram-positive bacteria
- C07K16/1282—Clostridium (G)
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
- C07K2317/76—Antagonist effect on antigen, e.g. neutralization or inhibition of binding
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/90—Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
- C07K2317/92—Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/90—Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
- C07K2317/94—Stability, e.g. half-life, pH, temperature or enzyme-resistance
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/90—Enzymes; Proenzymes
- G01N2333/91—Transferases (2.)
- G01N2333/91091—Glycosyltransferases (2.4)
- G01N2333/91097—Hexosyltransferases (general) (2.4.1)
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/569—Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
- G01N33/56911—Bacteria
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/573—Immunoassay; Biospecific binding assay; Materials therefor for enzymes or isoenzymes
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6854—Immunoglobulins
Abstract
Disclosed is a pharmaceutical composition comprising a monoclonal antibody suitable for reducing the duration and/or severity of diarrhoea or morbidity and/or mortality in a patient with Clostridium difficile infection or at risk of said infection wherein the antibody is specific to: antigen Clostridium difficile toxin A (TcdA) and binds 3 or more times in the range S1827-D2249 or G2205-R2608 of SEQ ID NO: 171 with an EC50 in the range 0.1 to 10 ng/ml when toxin is used at an LD80 or higher. dium difficile toxin A (TcdA) and binds 3 or more times in the range S1827-D2249 or G2205-R2608 of SEQ ID NO: 171 with an EC50 in the range 0.1 to 10 ng/ml when toxin is used at an LD80 or higher.
Description
NEUTRALISING ANTIBODIES TO THE MAJOR EXOTOXINS
TCDA AND TCDB OF IDIUM DIFFICILE
The present invention relates to antibodies to exotoxins of Closz‘rz‘dz’um dz‘fiicz'le, for
example Tch and Tch, pharmaceutical compositions comprising the same, processes of
producing said dies and compositions and use of the antibodies and compositions in
treatment and/or prophylaxis, in particular treatment or prophylaxis of Clostrz‘dz'um difi‘icz'le
infection, pseudomembranous colitis, fiilminant colitis and/or toxic mega colon.
The two major exotoxins Tch and Tch have been established as the major
pathogenicity inants of Closz‘rz'dz'um difficz'le in a large number of in vitro and in vivo
studies. Non-toxigenic strains are not pathogenic to animals and man (1, 2). To date a clear
understanding ofthe role ofbinary toxin has yet to be ished (3).
Both toxins are - and cyto-toxic, but the balance of evidence suggests that Tch
is a more powerfiil enterotoxin than Tch, whilst Tch is typically observed to be ~1000X
more cytotoxic than Tch (4). Whilst both toxins are capable of inducing an inflammatory
response, Tch appears to aid the migration ofthe more inflammatory Tch deeper into the
gut mucosa (5).
In 10:0, a large collection of data ted for over 30 years support a model where
both toxins are likely to be important in the human e process. It is probable that Tch
initiates early (i.e. before Tch) and rapid (i.e. 1-3 hours) gut damage h loss of tight
junctions and destruction of villi tips and hence diarrhoea, probably through albumin driven
fluid loss. This damage to the integrity of the gut lining enables Tch to exert its superior
molar potency (Tch is typically cited as being IOOOX more cytotoxic than Tch) more rapidly
and effectively (i.e. deeper into tissue, alternative cellular targets and damaging ically
accessed organs). Either toxin can be effective alone in vitro on human or s cells and
s. Either toxin can be effective alone in vivo in animals depending upon other eliciting
factors such as ical damage, barrier overload and host specific sensitivities. It is now
clear that in hamsters at least either Tch or Tch alone delivered by a Clostridz'um diflicz'le
gut infection can cause death (1). It is well established that A—B+ strains are capable of causing
symptoms and death in humans (6,7). However, the majority (~95%) of clinical strains are
A+B+ hence drugs aimed at treating Closrrz'dz'um dz'flicz‘le infections (CD1) must be capable of
neutralising the activities of and clearing both toxins effectively.
CDI is most typically a nosocomial infection of older patients or those with
complicating co-morbidities. However, an increase in community acquired ions has been
noted. Infection is almost always ated with or induced by use of broad spectrum
antibiotics. Healthcare associated costs are estimated to be in excess of $1bn per annum in the
US alone. These costs are primarily due to ts having longer hospitals stays. Current
ies involve the use of antibiotics such as clindamycin, vancomycin or fidaxomicin which
kill the Clostrz'a’ium dz'fiicz'le cells within the gut. Current therapies address the bacterial
infection but do not deal with or prevent directly the significant pathogenesis caused by Tch
and Tch which are major contributors to CD1 symptoms and mortality.
CDI ms in humans include mild to severe diarrhoea, pseudomembranous colitis
(PMC) and fulminant colitis or so called toxic mega colon. Death results in 5- 15% of ts
receiving current best care. Thus at the present time there is no c therapy available to
patients to t the damage and injury caused by C. dz'flz‘cz'le toxins after infection.
Raising an antibody response through vaccination and parenteral stration of
polyclonal and onal antibodies have all been shown to be capable of protecting animals
from symptoms of diarrhoea and death (8~15). Early studies in hamsters suggested that
antibodies against Tch alone were all that was necessary for tion. However, use of
strains fimctionally deleted for Tch or Tch demonstrate that either toxin is capable of
causing disease in hamsters, but that both toxins together are more effective (1).
For therapeutic applications, monoclonal antibodies (Mabs) can offer efficacy, safety,
manufacturing and regulatory advantages over serum derived polyclonal antibodies or serum
derived hyper-immune sera. For these reasons Mabs are usually the preferred option for
therapeutic ts.
There have been a number of attempts to generate protective Mabs against Tch and
Tch. The most ed ofthese in the clinic is a mixture of 2 lgGl Mabs, one against each
Tch and Tch originally called CDAl and MDXl388 developed by MBL and Medarex.
They were demonstrated to be unable to fully protect hamsters in models of acute or relapse
infections (15). This Mab combination is now being developed as A by Merck Inc. In
a human phase II trial MK3415A resulted in a statistically significant reduction in disease
recurrence (p = 0.006) (see also Lowy et al., NEJM (2010) 362: 197-205) but did not affect the
duration / severity of diarrhoea or death rates (16). This may mean that these dies may
only be useful for preventing recurrence of infection. Recurrence of infection results in
approximately 25% ofpatients. Thus there likely to be a significant patient population in which
these antibodies are not ive.
In order to be able to have a ve influence upon diarrhoea (for example as a result
of acute damage to gut tight junctions due to Tch) and death (for example resulting from
prolonged poor nutritional status, dehydration stress and initiation of an inflammatory cascade,
read anatomical damage to the gut lining and possibly damage to distant organs due to
systemic toxin Tch more so than Tch) Mabs are required with superior affinity, toxin
neutralisation, superior tion of loss of TEER —epithelial electrical resistance),
antigen decoration and antigen immune clearance.
Summary of the Present Invention
The present invention provides a pharmaceutical ition comprising Mab(s) with a
very high level of potency in vitro and in vivo which have the potential to have an impact upon
duration and severity of oea and death rate in humans suffering from Clostridium diflicile
infection (CD1).
In one aspect there is provided a pharmaceutical composition comprising a onal
antibody suitable for reducing the duration and/or severity of diarrhoea or morbidity and/or
ity in a t with Clostridium difiicile infection or at risk of said infection wherein the
antibody is specific to: antigen Clostrz‘dium diflicz’le toxin A (Tch) and binds 3 or more times
in the range S1827-D2249 or R2608 of SEQ ID NO: 171 with an EC50 in the range 0.1
to 10 ng/ml when toxin is used at an LDgo or higher.
In one ment there is provided a monoclonal antibody specific to antigen Tch
or Tch, wherein the antibody has high affinity for the target antigen and is suitable for
ng the duration and/or severity of diarrhoea and morbidity in a patient with Closrria’ium
difificile infection or at risk of said infection.
In one embodiment there is provided a Mab specific to Tch or Tch, or a population
of at least two Mabs at least one of which is specific to Tch and at least one of which is
specific to Tch, wherein the EC50 of the or each antibody or the combination of antibodies is
ZOOng/ml or less, for example 150ng/ml or less such as lOOng/ml.
The antibodies of the present disclosure are useful e they are likely to provide a
means of treating the severity and duration of symptoms of a primary infection such as
diarrhoea in a t or preventing death and not just prevent the reoccurrence of disease
symptoms.
In at least some embodiments the antibodies according to the present disclosure show
no reduction in potency in the presence of high trations of toxin.
Detailed Description of the Present Invention
Specific as employed herein is intended to refer to an antibody that only recognises the
antigen to which it is specific or an antibody that has significantly higher binding affinity to the
antigen to which is specific compared to binding to antigens to which it is non-specific, for
example 5, 6, 7, 8, 9, 10 times higher binding affinity.
Binding affinity may be measured by standard assays such as surface n
nce, such as BIAcore.
(followed by page 3a)
In one embodiment the ECso is less than 75, 70, 60, 65, 55, 50, 45, 40, 35, 30, 25, 20,
, 10, 9, 8, 7, 6, 5, 4, 3, 2, 1.5 ng/ml Clostridium difficile infection in cell culture assays and
the patient. This is significantly lower (more potent) than known antibodies and is thought to
be a major factor as to why the dies of the present disclosure have a significant and
positive impact on survival of subjects receiving treatment.
As ed herein potency is the ability of the antibody to elicit an appropriate
biological response, for example neutralisation of the deleterious toxin s, at a given dose
[FOLLOWED BY PAGE 4]
WO 38156
or concentration. Examples ofpotency include the percent maximal lisation of toxin
activity (extent ofprotection), the lowest relative concentration ofMab to antigen (e.g. ECso),
the speed and durability of neutralisation activity.
In cell culture assays lisation might be observed as one or more of the following:
prevention ofbinding oftoxin to cells, immunoprecipitation oftoxin from solution, prevention
of loss of cell form and shape, prevention of loss of cytoskeletal structures, prevention of loss
of cell mono layer tight junctions and trans-epithelial electrical resistance, prevention of cell
death, apoptosis and production ofpro-inflammatory cytokines such as TNFOL, IL- 1 [3, IL—6 and
MIP let.
In tissue section and explant assays neutralisation may, for example be observed as
prevention ofnecrosis and/or tous fluid accumulation.
In in viva assays neutralisation may be ed as one or more ofthe following:
prevention of fluid accumulation in ligated ileal loops and prevention of gut tissue necrosis,
diarrhoea, pseudo—membrane formation of death of animals,
Thus in one embodiment there is provided an antibody (for example an oxin A
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRs, selected from:
QASQS I SNALA SEQ ID NO: 1
SASSLAS SEQ ID NO: 2
QYTHYSHTSKNP SEQ ID N023
GFTISSYYMS SEQ ID NO: 4
I I SSGGHFTWYANWAKG SEQ ID NO: 5
AYVSGSSFNGYAL SEQ ID NO: 6
In one embodiment sequences 1 to 3 are in a light chain of the dy.
In one embodiment sequences 4 to 6 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 1 is CDR Ll, SEQ ID NO: 2 is CDR L2 and SEQ ID
NO; 3 is CDR L3.
In one embodiment SEQ ID NO: 4 is CDR H1, SEQ ID NO: 5 is CDR H2 and SEQ ID
NO; 6 is CDR H3.
In one embodiment SEQ ID NO: 1 is CDR Ll, SEQ ID NO: 2 is CDR L2, SEQ ID NO;
3 is CDR L3, SEQ ID NO: 4 is CDR Hl, SEQ ID NO: 5 is CDR H2 and SEQ ID NO; 6 is
CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 922 anti-toxin A antibody;Light chain Variable
region sequence) SEQ ID NO: 7:
DPVMTQS PSTLSASVGDRVT I TCQASQS I SNALAWYQQKPGKAPKLLIYSAS PSRFK
GSGSGTEFTLTISSLQPDDFATYYCQYTHYSHTSKNPFGGGTKVEIK
wherein the CDRs are underlined and construct is referred to herein as 922.gl VK (ng).
The polynucleotide sequence encoding SEQ ID NO: 7 is shown in Figure l and SEQ
ID NO: 8 therein.
In one ment there is ed a variable region, such as a heavy chain variable
region with the following sequence (Antibody 922 anti-toxin A antibody heavy chain variable
region sequence) SEQ ID NO: 9:
EVQLVESGGGLVQPGGSLRLSCAASGFT I S SYYMSWVRQAPGKGLEWIGI I S SGGHFTWYANW
_§_RFT I S S DS TTVYLQMNSLRDEDTATYFCARAYVSG S S WGQGTLVTVS
wherein the CDRs are underlined and construct is referred to herein as 922.gl VH (gH l)
The polynucleotide sequence encoding SEQ ID NO: 9 is shown in Figure 1 and SEQ
ID NO: 10 therein.
In one ment the antibody comprises the variable regions shown in SEQ ID NO:
7 and 9.
Thus in one embodiment there is provided an antibody (for example an anti-toxin A
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRs, selected from:
QASQSISNYLA SEQ ID NO: 11
SASTLAS SEQ ID NO: 12
QYSI—IYGTGVFGA SEQ ID NO: 13
AFSLSNYYMS SEQ ID NO: 14
IISSGSNALKWYASWPKG SEQ ID NO: 15
NYVGSGSYYGMDL SEQ ID NO: 16
In one embodiment sequences 11 to 13 are in a light chain ofthe antibody.
In one embodiment sequences 14 to 16 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 11 is CDR L1, SEQ ID NO: 12 is CDR L2 and SEQ
ID NO: 13 is CDR L3.
In one embodiment SEQ ID NO: 14 is CDR Hl, SEQ ID NO: 15 is CDR H2 and SEQ
ID NO; 16 is CDR H3.
In one embodiment SEQ ID NO: 1 1 is CDR L1, SEQ ID NO: 12 is CDR L2, SEQ ID
NO: 13 is CDR L3, SEQ ID NO: 14 is CDR H1, SEQ ID NO: 15 is CDR H2 and SEQ ID NO;
16 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the ing sequence (Antibody 923 oxin A antibody; Light chain Variable
region sequence) SEQ ID NO: 17:
2012/052222
DVVMTQSPSSLSASVGDRVTITCQASQS I SNYLAWYQQKPGKVPKLLIYSASTLASGVPSRFK
GSGSGTQFTLTI SSLQPEDVATYYCQYSHYGTGVFGAFGGGTKVEIK
wherein the CDRs are ined and construct is referred to herein as g1 ng
The cleotide sequence encoding SEQ ID NO: 17 is shown in Figure 1 and SEQ
ID NO: 18 therein.
In one ment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 923 anti-toxin A antibody heavy chain variable
region sequence) SEQ ID NO: 19:
SGGGLVQPGGSLRLSCAASAFSLSNYYMSWVRQAPGKGLEWIGI I S SGSNALKWYAS
WPKGRFTI SKDSTTVYLQMNSLRAEDTATYFCARNYVGSGSYYGMDLWGQGTLVTVS
wherein the CDRs are underlined and construct is referred to herein as CA923.g1 gH1
The polynucleotide sequence encoding SEQ ID NO: 19 is shown in Figure 2 and SEQ
ID NO: 20 therein.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO 17: and SEQ ID NO: 19.
In one embodiment there is provided an antibody (for example an anti-toxin A
antibody) comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected from:
QASQSISSYFS SEQ ID NO: 21
GASTLAS SEQ ID NO: 22
QCTDYSGIYFGG SEQ ID NO: 23
GFSLSSYYMS SEQ ID NO: 24
STTFTWYASWAKG SEQ ID NO: 25
AYVGSSSYYGFDP SEQ ID NO: 26
In one embodiment sequences 21 to 23 are in a light chain ofthe antibody.
In one embodiment sequences 24 to 26 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 21 is CDR L1, SEQ ID NO: 22 is CDR L2 and SEQ
ID NO; 23 is CDR L3.
In one embodiment SEQ ID NO: 24 is CDR H1, SEQ ID NO: 25 is CDR H2 and SEQ
ID NO; 26 is CDR H3.
In one embodiment SEQ ID NO: 21 is CDR L1, SEQ ID NO: 22 is CDR L2, SEQ ID
NO; 23 is CDR L3, SEQ ID NO: 24 is CDR H1, SEQ ID NO: 25 is CDR H2 and SEQ ID NO;
26 is CDR H3.
In one ment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 993 anti-toxin A antibody; Light chain Variable
region sequence) SEQ ID NO: 27:
DVVMTQS PSTLSASVGDRVT ITCQASQS I S SYFSWYQQKPGKAPQLLIYGASTLASGVPSRFK
GSGSGTELTLTISSLQPDDFATYYCQCTDYSGIYFGGFGGGTKVEIK
wherein the CDRs are underlined and construct is referred to herein as CA993.g1 ng
The polynucleotide sequence encoding SEQ ID NO: 27 is shown in Figure 2 and SEQ
ID NO: 28 therein.
In one embodiment there is provided a variable region, such as a heavy chain le
region with the following sequence ody 993 anti-toxin A antibody heavy chain variable
region sequence) SEQ ID NO: 29:
EVQLVE SGGGLVQPGGSLKLSCTASGFSLS SYYMSWVRQAPGKGLEWIGI I S SGS S TTF‘I‘WYA
IO FT I SKT S TTVYLQMNSLKTEDTATYFCARAYVGS S SYYGFDPWGQGTLVTVS
wherein the CDRs are underlined and construct is referred to herein as gl ng
The polynucleotide sequence encoding SEQ ID NO: 29 is shown in Figure 2 and SEQ
ID NO: 30 therein.
In one embodiment an antibody according to the invention comprises variable s
shown in SEQ ID NO: 27 and SEQ ID NO: 29.
In one embodiment there is ed an antibody (for example an oxin A
antibody) comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected from:
QASQSINNYFS SEQ ID NO: 31
GAANLAS SEQ ID NO: 32
QNNYGVHIYGAA SEQ ID NO: 33
GFSLSNYDMI SEQ ID NO: 34
FINTGGITYYASWAKG SEQ ID NO: 35
VDDYIGAWGAGL SEQ ID NO: 36
In one embodiment sequences 31 to 33 are in a light chain ofthe antibody.
In one embodiment ces 34 to 36 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 3l is CDR Ll, SEQ ID NO: 32 is CDR L2 and SEQ
ID NO; 33 is CDR L3.
In one embodiment SEQ ID NO: 34 is CDR H1, SEQ ID NO: 35 is CDR H2 and SEQ
ID NO: 36 is CDR H3.
In one embodiment SEQ ID NO: 31 is CDR Ll, SEQ ID NO: 32 is CDR L2, SEQ ID
NO; 33 is CDR L3, SEQ ID NO: 34 is CDR H1, SEQ ID NO: 35 is CDR H2 and SEQ ID NO;
36 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 995 anti-toxin A antibody; Light chain Variable
region sequence) SEQ ID NO: 37:
2012/052222
S PSTLSASVGDRVT I TCQASQS INNYFSWYQQKPGKAPKLLI YGAANLASGVPSRFK
GSGSGTEYTL‘I‘ I S SLQPDDFATYSCQNNYGVHIYGAAFGGGTKVE IK
wherein the CDRs are underlined
The polynucleotide sequence encoding SEQ ID NO: 37 is shown in Figure 3 and SEQ
ID NO: 38 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 995 oxin A dy heavy chain variable
region sequence) SEQ ID NO: 39
EVQLVESGGGLVQPGGSLRLSCTASGFSLSNYDMIWVRQAPGKGLEYIGFINTGGITYYASWA
ERFT I SRDS STVYLQMNSLRAEDTATYFCARVDDY IGAWGAGLWGQGTLVTVS
wherein the CDRs are underlined
The polynucleotide sequence encoding SEQ ID NO: 39 is shown in Figure 3 and SEQ
ID NO: 40 therein.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO: 37 and SEQ ID NO: 39.
In one embodiment there is ed an antibody (for example an anti-toxin A
dy) comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected from:
QASQSISSYLS SEQ ID NO: 41
RASTLAS SEQ ID NO: 42
LGVYGYSNDDGIA SEQ ID NO: 43
GIDLSSHHMC SEQ ID NO: 44
VIYHFGSTYYANWATG SEQ ID NO: 45
ASIAGYSAFDP SEQ ID NO: 46
In one embodiment sequences 41 to 43 are in a light chain ofthe antibody.
In one embodiment sequences 44 to 46 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 41 is CDR Ll, SEQ ID NO: 42 is CDR L2 and SEQ
ID NO; 43 is CDR L3.
In one embodiment SEQ ID NO: 44 is CDR H1, SEQ ID NO: 45 is CDR H2 and SEQ
ID NO: 46 is CDR H3.
In one embodiment SEQ ID NO: 41 is CDR Ll, SEQ ID NO: 42 is CDR L2, SEQ ID
NO; 43 is CDR L3, SEQ ID NO: 44 is CDR H1, SEQ ID NO: 45 is CDR H2 and SEQ ID NO;
46 is CDR H3.
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In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 997 anti-toxin A antibody; Light chain Variable
region sequence) SEQ ID NO: 47:
ALVMTQSPSSFSASTGDRVTI TCQASQS I SSYLSWYQQKPGKAPKLLIYRASTLASGVPSRFS
GSGSGTEYTLTI SCLQSEDFA‘I‘YYCLGVYGYSNDDGIAFGGGTKVE IK
wherein the CDRs are underlined
The polynucleotide sequence encoding SEQ ID NO: 47 is shown in Figure 3 and SEQ
ID NO: 48 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the ing ce (Antibody 997 anti—toxin A antibody heavy chain variable
region sequence) SEQ ID NO: 49:
EVQLVE SGGGLVQPGGSLRLSCTVSG I DL S SHHMCWVRQAPGKGLEY I GVIYHFGSTYYANWA
ERF'I' I SKDS MNSLRAEDTATYFCARAS IAGYSAFDPWGQGTLVTVS
wherein the CDRs are underlined
The polynucleotide sequence ng SEQ ID NO: 49 is shown in Figure 4 and SEQ
ID NO: 50 therein.
In one embodiment an antibody according to the invention comprises le regions
shown in SEQ ID NO: 47 and SEQ ID NO: 49.
In one embodiment there is provided an antibody (for example an oxin A
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRs, ed from:
QASQSIYSYLA SEQ ID NO: 51
DASTLAS SEQ ID NO: 52
QGNAYTSNSHDNA SEQ ID NO: 53
GIDLSSDAVG SEQ ID NO: 54
I IA‘I‘FDS‘I‘YYASWAKG SEQ ID NO: 55
TGSWYYISGWGSYYYGMDL SEQ ID NO: 56
In one embodiment sequences 51 to 53 are in a light chain ofthe antibody.
In one embodiment sequences 54 to 56 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 51 is CDR L1, SEQ ID NO: 52 is CDR L2 and SEQ
ID NO: 53 is CDR L3.
In one embodiment SEQ ID NO: 54 is CDR Hl, SEQ ID NO: 55 is CDR H2 and SEQ
ID NO; 56 is CDR H3.
In one embodiment SEQ ID NO: 51 is CDR L1, SEQ ID NO: 52 is CDR L2, SEQ ID
NO; 53 is CDR L3, SEQ ID NO: 54 is CDR H1, SEQ ID NO: 55 is CDR H2 and SEQ ID NO:
56 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1000 oxin A antibody; Light chain
Variable region sequence) SEQ ID NO: 57:
EIVMTQSPSTLSASVGDRVTITCQASQS IYSYLAWYQQKPGKAPKLLIYDASTLASGVPSRFK
GSGSGTEFTLTISSLQPDDFATYYCQGNAYTSNSHDNAFGGGTKVEIK
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 57 is shown in Figure 4 and SEQ
ID NO: 58 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following ce (Antibody 1000 oxin A antibody heavy chain le
region sequence) SEQ ID NO: 59:
SGGGLIQPGGSLRLSCTVSGIDLS SDAVGWVRQAPGKGLEYIGI IATFDSTYYASWA
ERFT I SKAS STTVYLQMNSLRAEDTATYFCARTGSWYY I SGWGSYYYGMDLWGQGTLVTVS
wherein the CDRs are ined.
The polynucleotide sequence encoding SEQ ID NO: 59 is shown in Figure 4 and SEQ
ID NO: 60 therein.
In one embodiment an antibody according to the invention comprises variable s
shown in SEQ ID NO: 57 and SEQ ID NO: 59.
In one embodiment there is provided an antibody (for example an anti-toxin B
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRs, selected from:
RASKSVSTLMH SEQ ID NO: 61
LASNLES SEQ ID NO: 62
QQTWNDPWT SEQ ID NO: 63
GFTFSNYGMA SEQ ID NO: 64
SISSSGGSTYYRDSVKG SEQ ID NO: 65
VIRGYVMDA SEQ ID NO: 66
In one embodiment sequences 61 to 63 are in a light chain ofthe antibody.
In one embodiment sequences 64 to 66 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 61 is CDR L1, SEQ ID NO: 62 is CDR L2 and SEQ
ID NO: 63 is CDR L3.
In one embodiment SEQ ID NO: 64 is CDR H1, SEQ ID NO: 65 is CDR H2 and SEQ
ID NO: 66 is CDR H3.
In one embodiment SEQ ID NO: 61 is CDR Ll, SEQ ID NO: 62 is CDR L2, SEQ ID
NO; 63 is CDR L3, SEQ ID NO: 64 is CDR H1, SEQ ID NO: 65 is CDR H2 and SEQ ID NO:
66 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 926 anti—toxin B antibody; Light chain Variable
region sequence) SEQ ID NO: 67:
DTVLTQSPATLSLSPGERATLSCRASKSVSTLMHWFQQKPGQAPKLLIYLASNLESGVPARFS
GSGSGTDFTLTI SSLE PEDFAVYYCQQTWNDPWTFGGGTKVEIK
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 67 is shown in Figure 5 and SEQ
ID NO: 68 therein.
In one ment there is provided a variable region, such as a heavy chain variable
l0 region with the following sequence (Antibody 926 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 69:
EVELLESGGGLVQPGGSLRLSCEASGFTFSNYGMAWVRQAPTKGLEWVTSI SSSGGSTYYRDS
YERFTI SRDNAKS SLYLQMNSLRAEDTATYYCTTVIRGYVMDAWGQGTLVTVS
wherein the CDRs are underlined.
The polynucleotide sequence ng SEQ ID NO: 69 is shown in Figure 5 and SEQ
ID NO: 70 therein.
In one embodiment there is provided an antibody (for example an anti—toxin B
dy) sing a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected from:
RASGSVSTLMH SEQ ID NO: 71
KASNLAS SEQ ID NO: 72
HQSWNSDT SEQ ID NO: 73
GFTFSNYGMA SEQ ID NO: 74
RTTHYRDSVKG SEQ ID NO: 75
I SRSHYFDC SEQ ID NO: 76
In one embodiment sequences 71 to 73 are in a light chain ofthe dy.
In one embodiment sequences 74 to 76 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 71 is CDR Ll, SEQ ID NO: 72 is CDR L2 and SEQ
ID NO: 73 is CDR L3.
In one embodiment SEQ ID NO: 74 is CDR Hl, SEQ ID NO: 75 is CDR H2 and SEQ
ID NO: 76 is CDR H3.
In one embodiment SEQ ID NO: 71 is CDR Ll, SEQ ID NO: 72 is CDR L2, SEQ ID
NO; 73 is CDR L3, SEQ ID NO: 74 is CDR H1, SEQ ID NO: 75 is CDR H2 and SEQ ID NO:
76 is CDR H3.
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In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 927 anti-toxin B antibody; Light chain Variable
region sequence) SEQ ID NO: 77:
DTQMTQSPSTLSASVGDRVTITCRASGSVSTLMHWYQQKPGKAPKLLIYKASNLASGVPSRFS
GSGSGTEFTLTISSLQPDDFATYYCHQSWNSDTFGQGTRLEIK
wherein the CDRs are ined
The polynucleotide sequence encoding SEQ ID NO: 77 is shown in Figure 5 and SEQ
ID NO: 78 therein.
In one embodiment there is provided a variable , such as a heavy chain variable
region with the following sequence (Antibody 927 oxin B antibody heavy chain variable
region sequence) SEQ ID NO: 79:
EVQLVE SGGGVVQPGRSLRLSCAASGFTFSNYGMAWVRQAPGKGLEWVAT INYDGRTTHYRDS
V_K§RFTI SRDNSKSTLYLQMNSLRAEDTAVYYCTS I SRSHYFDCWGQGTLVTVS
wherein the CDRs are underlined.
The cleotide sequence ng SEQ ID NO: 79 is shown in Figure 5 and SEQ
ID NO: 80 therein.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO: 77 and SEQ ID NO: 79.
In one embodiment there is provided an antibody (for example an anti-toxin B
dy) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRs, selected from:
KASKSISNHLA SEQ ID NO: 81
SGSTLQS SEQ ID NO: 82
QQYDEYPYT SEQ ID NO: 83
GFSLQSYTIS SEQ ID NO: 84
AI SGGGSTYYNLPLKS SEQ ID NO: 85
PRWYPRSYFDY SEQ ID NO: 86
In one embodiment sequences 81 to 83 are in a light chain ofthe antibody.
In one embodiment sequences 84 to 86 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 81 is CDR L1, SEQ ID NO: 82 is CDR L2 and SEQ
ID NO: 83 is CDR L3.
In one embodiment SEQ ID NO: 84 is CDR H1, SEQ ID NO: 85 is CDR H2 and SEQ
ID NO: 86 is CDR H3.
In one embodiment SEQ ID NO: 81 is CDR Ll, SEQ ID NO: 82 is CDR L2, SEQ ID
NO; 83 is CDR L3, SEQ ID NO: 84 is CDR H1, SEQ ID NO: 85 is CDR H2 and SEQ ID NO:
86 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence ody 1099 anti-toxin B antibody; Light chain
Variable region sequence) SEQ ID NO: 87:
DVQLTQSPSFLSASVGDRVTITCKASKS I SNHLAWYQEKPGKANKLLIHSGSTLQSGTPSRFS
GSGSGTEFTLTISSLQPEDFATYYCQQYDEYPYTFGQGTRLEIKRT
wherein the CDRs are underlined.
In one embodiment the last two amino acids (RT) of SEQ ID NO: 87 are d.
The polynucleotide sequence encoding SEQ ID NO: 87 is shown in Figure 6 and SEQ
ID NO: 88 therein. In one ment the codons encoding the last two amino acids (RT) are
omitted.
In one ment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 1099 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 89:
EVQLQESGPGLVKPSETLSLTCTVSGFSLQSYTISWVRQPPGKGLEWIAAISGGGSTYYNLPL
ERVT I SRDTSKSQVSLKLS SVTAADTAVYYCTRPRWYPRSYFDYWGRGTLVTVS
wherein the CDRs are underlined
The polynucleotide sequence encoding SEQ ID NO: 89 is shown in Figure 6 and SEQ
ID NO: 90 therein.
In one ment an antibody according to the invention comprises variable regions
shown in SEQ ID NO 87: and SEQ ID NO: 89.
In one embodiment there is provided an antibody (for example an anti-toxin B
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRS, ed from:
RASQRISTSIH SEQ ID NO: 91
YASQSIS SEQ ID NO: 92
oosyssmr SEQ ID NO: 93
GFTFSDSYMA SEQ ID NO: 94
SISYGGTIIQYGDSVKG SEQ ID NO: 95
RQGTYARYLDF SEQ ID NO: 96
In one embodiment sequences 91 to93 are in a light chain ofthe antibody.
In one embodiment sequences 94 to 96 are in a heavy chain ofthe antibody.
In one ment SEQ ID NO: 91 is CDR Ll, SEQ ID NO: 92 is CDR L2 and SEQ
ID NO; 93 is CDR L3.
In one embodiment SEQ ID NO: 94 is CDR H1, SEQ ID NO: 95 is CDR H2 and SEQ ID NO:
96 is CDR H3.
2012/052222
In one ment SEQ ID NO: 91 is CDR L1, SEQ ID NO: 92 is CDR L2, SEQ ID
NO; 93 is CDR L3, SEQ ID NO: 94 is CDR H1, SEQ ID NO: 95 is CDR H2 and SEQ ID NO:
96 is CDR H3.
In one embodiment there is provided a le region, such as a light chain variable
region with the following sequence (Antibody 1102 anti-toxin B antibody; Light chain
Variable region sequence) SEQ ID NO: 97:
NIVLTQSPATLSLSPGERATLSCRASQRI STS IHWYQQKPGQAPRLLIKYASQS I SGI PARFS
GSGSGTDFTLTISSLE PEDFAVYYCQQSYSSLYTFGQGTKLEIK
wherein the CDRs are underlined
The polynucleotide sequence encoding SEQ ID NO: 97 is shown in Figure 6 and SEQ
ID NO: 98 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 1102 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 99:
EVQLVESGGGLVQPGGSLRLSCAVSGFTFSDSYMAWVRQAPGKGLEWIAS I SYGGTI IQYGDS
YERFT I SRDNAKS SLYLQMNSLRAEDTAVYYCARRQGTYARYLDFWGQGTLVTVS
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 99 is shown in Figure 7 and SEQ
ID NO: 100 therein.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO 97: and SEQ ID NO: 99.
In one embodiment there is ed an antibody (for example an anti-toxin B
antibody) comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected from:
RASESVSTLLH SEQ ID NO: 101
KASNLAS SEQ ID NO: 102
HQSWNSPPT SEQ ID NO: 103
GFTFSNYGMA SEQ ID NO: 104
I TTHYRDSVKG SEQ ID NO: 105
YGRSHYFDY SEQ ID NO: 106
In one embodiment sequences 101 to 103 are in a light chain ofthe antibody.
In one embodiment ces 104 to 106 are in a heavy chain ofthe antibody.
In one ment SEQ ID NO: 101 is CDR Ll, SEQ ID NO: 102 is CDR L2 and
SEQ ID NO: 103 is CDR L3.
In one embodiment SEQ ID NO: 104 is CDR H1, SEQ ID NO: 105 is CDR H2 and
SEQ ID NO: 106 is CDR H3.
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In one embodiment SEQ ID NO: 101 is CDR L1, SEQ ID NO: 102 is CDR L2, SEQ ID
NO; 103 is CDR L3, SEQ ID NO: 104 is CDR H1, SEQ ID NO: 105 is CDR H2 and SEQ ID
NO; 106 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1114 anti-toxin B dy; Light chain
Variable region sequence) SEQ ID NO: 107:
ATQMTQSPSSLSASVGDRVTITCRASESVSTLLHWYQQKPGKAPKLLIYKASNLASGVPSRFS
GSGSGTDFTLTISSLQPEDFATYYCHQSWNSPPTFGQGTKLEIK
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 107 is shown in Figure 7 and SEQ
ID NO: 108 therein.
In one embodiment there is provided a le region, such as a heavy chain le
region with the following ce (Antibody 1114 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 109:
EVQLVE SGGGLVQPGGSLRLSCAASGFTFSNYGMAWVRQAPGKGLEWVAI INYDAB '1‘THYRDS
YERFT I SRDNAKS SLYLQMNSLRAEDTAVYYCTRYGRSHYFDYWGQGTLVTVS
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 109 is shown in Figure 7 and SEQ
ID NO: 110 n.
2O In one ment an dy according to the invention comprises variable regions
shown in SEQ ID NO: 107 and SEQ ID NO: 109.
In one embodiment there is provided an antibody (for example an anti-toxin B
antibody) comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRS, selected from:
RASESVSTLLH SEQ ID NO: 111
KASNLAS SEQ ID NO: 112
HQSWNSPPT SEQ ID NO: 113
GFTFSNYGMA SEQ ID NO: 114
IINYDASTTHYRDSVK SEQ ID NO: 115
YGRSHYFDY SEQ ID NO: 116
In one embodiment sequences 111 to 113 are in a light chain ofthe antibody.
In one embodiment sequences 114 to 116 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 111 is CDR L1, SEQ ID NO: 112 is CDR L2 and
SEQ ID NO: 113 is CDR L3.
In one embodiment SEQ ID NO: 114 is CDR H1, SEQ ID NO: 115 is CDR H2 and
SEQ ID NO: 116 is CDR H3.
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In one embodiment SEQ ID NO: 111 is CDR L1, SEQ ID NO: 112 is CDR L2, SEQ ID
NO; 113 is CDR L3, SEQ ID NO: 114 is CDR H1, SEQ ID NO: 115 is CDR H2 and SEQ ID
NO: 116 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1114 graft 8 anti-toxin B antibody; Light chain
Variable region sequence) SEQ ID NO: 117:
SPSSLSASVGDRVTITCRASESVSTLLHWYQQKPGKAPKLLIYKASNLASGVPSRFS
GSGSGTDFTLTISSLQPEDFATYYCHQSWNSPPTFGQGTKLEIK
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 117 is shown in Figure 8 and SEQ
ID NO: 118 n.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 1114 graft 8 anti-toxin B antibody heavy chain
variable region sequence) SEQ ID NO: 119:
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYGMAWVRQAPGKGLEWVAI INYDASTTHYRDS
EGRFT I SRDNAKS SLYLQMNSLRAEDTAVYYCTRYGRSHYFDYWGQGTLVTVS
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 119 is shown in Figure 8 and SEQ
ID NO: 120 therein.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO: 117 and SEQ ID NO: 119.
In one embodiment there is provided an dy (for example an oxin B
antibody) sing a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected from:
KASQNIYMYLN SEQ ID NO: 121
NTNKLHT SEQ ID NO: 122
LQHKSFPYT SEQ ID NO: 123
SFMA SEQ ID NO: 124
SISYEGDKTYYGDSVKG SEQ ID NO: 125
LTITTSGDS SEQ ID NO: 126
3O In one embodiment sequences 121 to 123 are in a light chain ofthe antibody.
In one embodiment sequences 124 to 126 are in a heavy chain ofthe dy.
In one embodiment SEQ ID NO: 121 is CDR L1, SEQ ID NO: 122 is CDR L2 and
SEQ ID NO: 123 is CDR L3.
In one embodiment SEQ ID NO: 124 is CDR H1, SEQ ID NO: 125 is CDR H2 and
SEQ ID NO: 126 is CDR H3.
In one embodiment SEQ ID NO: 121 is CDR Ll, SEQ ID NO: 122 is CDR L2, SEQ ID
NO: 123 is CDR L3, SEQ ID NO: 124 is CDR H1, SEQ ID NO: 125 is CDR H2 and SEQ ID
NO: 126 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1125 anti-toxin B antibody; Light chain
Variable region sequence) SEQ ID NO: 127:
DIQMTQSPSSLSASVGDRVTI TCKASQNIYMYLNWYQQKPGKAPKRLIYNTNKLHTGVPSRFS
GSGSGTEYTLTISSLQPEDFATYYCLQHKSFPYTFGQGTKLEIK
wherein the CDRs are ined.
The polynucleotide sequence encoding SEQ ID NO: 127 is shown in Figure 8 and SEQ
ID NO: 128 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the ing sequence (Antibody 1125 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 129:
EVQLVESGGGLVQPGGSLRLSCAASGFTFRDSFMAWVRQAPGKGLEWVAS I SYEGDKTYYGDS
ERFT I SRDNAKNSLYLQMNSLRAEDTAVYYCARLT I TT SGDSWGQGTMVTVS S
wherein the CDRs are ined.
In one embodiment the last amino acid (S) of SEQ ID NO: 129 is omitted.
The polynucleotide sequence encoding SEQ ID NO: 129 is shown in Figure 9 and SEQ
ID NO: 130 therein. In one embodiment the codon AGC encoding the last amino acid S is
omitted.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO: 127 and SEQ ID NO: 129.
In one embodiment there is provided antibody (for e an anti—toxin B dy)
comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected fiom:
KASQHVGTNVD SEQ ID NO: 131
GAS IRYT SEQ ID NO: 132
LQYNYNPYT SEQ ID NO: 133
GFIFSNFGMS SEQ ID NO: 134
SISPSGGNAYYRDSVKG SEQ ID NO: 135
RAYSSPFAF SEQ ID NO: 136
In one embodiment sequences 131 to 133 are in a light chain ofthe dy.
In one embodiment sequences 134 to 136 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 131 is CDR L1, SEQ ID NO: 132 is CDR L2 and
SEQ ID NO: 133 is CDR L3.
In one embodiment SEQ ID NO: 134 is CDR Hl, SEQ ID NO: 135 is CDR H2 and
SEQ ID NO: 136 is CDR H3.
In one embodiment SEQ ID NO: 131 is CDR L1, SEQ ID NO: 132 is CDR L2, SEQ ID
NO: 133 is CDR L3, SEQ ID NO: 134 is CDR H1, SEQ ID NO: 135 is CDR H2 and SEQ ID
NO: 136 is CDR H3.
In one embodiment there is provided a variable , such as alight chain variable
region with the following sequence (Antibody 1129 anti-toxin B antibody; Light chain
le region sequence) SEQ ID NO: 137:
DTQMTQS PS GDRVT I 'I'CKASQHVGTNVDWYQQKPGKVPKLL IYGAS IRYTGVPDRFT
GSGSGTDFTLTISSLQPEDVATYYCLQYNYNPYTFGQGTKLEIK
n the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 137 is shown in Figure 8 and SEQ
ID NO: 138 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 1129 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 139:
EVQLVESGGGVVQPGRSLRLSCATSGFI FSNFGMSWVRQAPGKGLEWVAS I S PSGGNAYYRDS
mRFTISRDNSKTTLYLQMNSLRAEDTAVYYCTRRAY S S PFAFWGQGTLVTVS S
wherein the CDRs are underlined.
In one embodiment the last amino acid (S) of SEQ ID NO: 139 is omitted.
The polynucleotide sequence ng SEQ ID NO: 139 is shown in Figure 8 and SEQ
ID NO: 140 therein. In one ment the codon AGC encoding the last amino acid S is
omitted.
In one embodiment an dy according to the invention comprises variable regions
shown in SEQ ID NO: 137 and SEQ ID NO: 139.
In one embodiment there is provided an antibody (for e an anti-toxin B
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRs, selected from:
KASKSISNHLA SEQ ID NO: 141
SGSTLQP SEQ ID NO: 142
QQYDEYPYT SEQ ID NO: 143
GFSLNSYTIT SEQ ID NO: 144
AISGGGSTYFNSALKS SEQ ID NO: 145
PRWYPRSYFDY SEQ ID NO: 146
In one embodiment sequences 141 to 143 are in a light chain ofthe antibody.
In one embodiment sequences 144 to 146 are in a heavy chain ofthe antibody.
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In one embodiment SEQ ID NO: 141 is CDR L1, SEQ ID NO: 142 is CDR L2 and
SEQ ID NO: 143 is CDR L3.
In one embodiment SEQ ID NO: 144 is CDR H1, SEQ ID NO: 145 is CDR H2 and
SEQ ID NO: 146 is CDR H3.
In one embodiment SEQ ID NO: 141 is CDR L1, SEQ ID NO: 142 is CDR L2, SEQ ID
NO: 143 is CDR L3, SEQ ID NO: 144 is CDR H1, SEQ ID NO: 145 is CDR H2 and SEQ ID
NO: 146 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1134 anti-toxin B antibody; Light chain
Variable region sequence):
DVQLTQSPSFLSASVGDRVTITCKASKS ISNHLAWYQEKPGKANKLLIHSGSTLQPGT
PSRFSGSGSGTEFTLTISSLQPEDFATYYCQQYDEYPYTFGQGTRLEIK
SEQ ID NO: 147
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 147 is shown in Figure 9 and SEQ
ID NO: 148 n.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 1134 anti-toxin B antibody heavy chain le
region sequence) SEQ ID NO: 149:
EVQLQESGPGLVKPSETLSLTCTVSGFSLNSYTITWVRQPPGKGLEWIAAISGGGSTYFNSAL
K_SRVTI SRDTSKSQVSLKLSSVTAADTAVYYCTRPRWYPRSYFDYWGRGTLVTVS
n the CDRS are underlined
The polynucleotide sequence encoding SEQ ID NO: 149 is shown in Figure 9 and SEQ
ID NO: 150 therein.
In one ment an antibody ing to the invention comprises variable regions
shown in SEQ ID NO 147: and SEQ ID NO: 149.
In one embodiment there is provided dy (for example an oxin B antibody)
comprising a CDR, such as 1, 2, 3, 4, 5 or 6 CDRs, selected fiom:
KASQNVGNNVA SEQ ID NO: 151
YASNRFT SEQ ID NO: 152
QRVYQSTWT SEQ ID NO: 153
GFSLTSYYVH SEQ ID NO: 154
CIRTGGNTEYQSEFKS SEQ ID NO: 155
GNYGFAY SEQ ID NO: 156
In one embodiment sequences 151 to 153 are in a light chain ofthe antibody.
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In one embodiment sequences 154 to 156 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 151 is CDR Ll, SEQ ID NO: 152 is CDR L2 and
SEQ ID NO: 153 is CDR L3.
In one embodiment SEQ ID NO: 154 is CDR H1, SEQ ID NO: 155 is CDR H2 and
SEQ ID NO: 156 is CDR H3.
In one embodiment SEQ ID NO: 151 is CDR L1, SEQ ID NO: 152 is CDR L2, SEQ ID
NO; 153 is CDR L3, SEQ ID NO: 154 is CDR H1, SEQ ID NO: 155 is CDR H2 and SEQ ID
NO; 156 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1151 anti-toxin B antibody; Light chain
Variable region sequence) SEQ ID NO: 157:
AI QM'I‘QS PS GDRVT I TCKASQNVGNNVAWYQHKPGKAPKLL I YYASNRFTGVPSRFT
GGGYGTDFTLTI SSLQPEDFATYYCQRVYQSTWTFGQGTKVEIK
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 157 is shown in Figure 9 and SEQ
ID NO: 158 therein.
In one embodiment there is provided a variable region, such as a heavy chain variable
region with the following sequence (Antibody 1151 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 159:
EVQLQESGPGLVKPSETLSLTCTVSGFSLTSYYVHWVRQPPGKGLEWMGCIRTGGNTEYQSEF
ERV‘I' I SRDT SKNQVSLKLS SVTAADTAVYYCARGNYGFAYWGQGTLVTVS
n the CDRS are underlined.
The polynucleotide sequence encoding SEQ ID NO: 159 is shown in Figure 9 and SEQ
ID NO: 160 therein.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO: 157 and SEQ ID NO: 159.
In one embodiment there is provided an antibody (for example an oxin B
antibody) comprising a CDR, such as l, 2, 3, 4, 5 or 6 CDRS, selected from:
KASQNINKYLD SEQ ID NO: 161
3O NIQSLHT SEQ ID NO: 162
FQHNSGW SEQ ID NO: 163
AAMF SEQ ID NO: 164
RISTKSNNFATYYPDSVKG SEQ ID NO: 165
PAYYYDG’I‘VPFAY SEQ ID NO: 166
In one embodiment ces 161 to 163 are in a light chain ofthe antibody.
In one embodiment ces 164 to 166 are in a heavy chain ofthe antibody.
In one embodiment SEQ ID NO: 161 is CDR Ll, SEQ ID NO: 162 is CDR L2 and
SEQ ID NO: 163 is CDR L3.
In one embodiment SEQ ID NO: 164 is CDR H1, SEQ ID NO: 165 is CDR H2 and
SEQ ID NO: 166 is CDR H3.
In one embodiment SEQ ID NO: 161 is CDR Ll, SEQ ID NO: 162 is CDR L2, SEQ ID
NO: 163 is CDR L3, SEQ ID NO: 164 is CDR H1, SEQ ID NO: 165 is CDR H2 and SEQ ID
NO: 166 is CDR H3.
In one embodiment there is provided a variable region, such as a light chain variable
region with the following sequence (Antibody 1153 anti—toxin B antibody; Light chain
Variable region sequence) SEQ ID NO: 167:
DIQMTQSPSSLSASVGDRVTITCKASQNINKYLDWYQQKPGKVPKLLIYNIQSLHTGI PSRFS
GSGSGTDFTLTISSLQPEDVATYYCFQHNSGWTFGQGTRLEIK
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 167 is shown in Figure 10 and
SEQ ID NO: 168 therein.
In one embodiment there is provided a variable region, such as a heavy chain le
region with the following sequence (Antibody 1153 anti-toxin B antibody heavy chain variable
region sequence) SEQ ID NO: 169:
EVQLVE SGGGLVQPGGSLKLSCAASGFTFTQAAMFWVRQASGKGLEGIARI STKSNNFATYYP
DSVKGRFT I SRDDSKNTVYLQMNSLKTEDTAVYYCTAPAYYYDGTVPFAYWGQGTLVTVS
wherein the CDRs are underlined.
The polynucleotide sequence encoding SEQ ID NO: 169 is shown in Figure 10 and
SEQ ID NO: 170 n.
In one embodiment an antibody according to the invention comprises variable regions
shown in SEQ ID NO: 167 and SEQ ID NO: 169.
In one embodiment there is provided antibody comprising 6 CDRs independently
selected from SEQ ID NOS 1,2, 3, 4,5,6,ll,12,13,l4,15,16, 21,22, 23, 24, 25, 26, 31, 32,
33, 34, 35, 36, 41, 42, 43, 44, 45, 46, 51, 52, 53, 54, 55, 56, 61, 62, 63, 64, 65, 66, 71, 72, 73,
74, 75, 76, 81, 82, 83, 84, 85, 86, 91, 92, 93, 94, 95, ,102,103,104,105,106,111,112,
113, 114,115, 116, 2,123,124,125,126, 131, 132, 133,134,135,136, 141,142,143,
144,145,146,151,152,153,154,155,156,161,162,l63,164,165 and 166.
In one embodiment there is provided an anti-Tch dy comprising 6 CDRs
independently selected from SEQ ID NOs 1, 2, 3, 4, 5, 6, 11, 12, 13, 14, 15, 16, 21, 22, 23, 24,
25, 26,31, 32,33, 34, 35, 36, 41, 42,43, 44, 45,46, 51, 52,53, 54, 55 and 56.
In one embodiment there is provided an anti—Tch antibody comprising 6 CDRS
independently selected from SEQ ID NOs 61, 62, 63, 64, 65, 66, 71, 72, 73, 74, 75, 76, 81, 82,
83, 84, 85, 86, 91, 92, 93, 94, 95, 96,101,102,103,104,105,106,111,112,113,114,115,
116, 121,122,123,124, 125, 126,131, 132, 133, 134, 135,136, 141, 142, 143, 144, 145, 146,
151, 152,153,154,155, 156,161,162,l63,164,165 and 166.
In one ment there is provided an antibody which comprises two variable regions
ndently selected from SEQ ID NOs: 7, 9, 17, 19, 27, 29, 37, 39, 47, 49, 57, 59, 67, 69,
77, 79, 87, 89, 97, 99, 107, 109, 117, 119, 127, 129, 137, 139, 147, 149, 157 and 159.
In one embodiment there is provided an antibody which comprises two variable regions
independently ed fiom SEQ ID NOS: 7, 9, 17, 19, 27, 29, 37, 39, 47, 49, 57 and 59.
In one embodiment there is provided an dy which comprises two variable regions
independently selected from SEQ ID N08: 67, 69, 77, 79, 87, 89, 97, 99, 107, 109, 117, 119,
127, 129, 137, 139, 147, 149, 157 and 159.
In one ment the antibodies according to the invention are humanized.
In one embodiment the antibody or antibodies are directed to the C terminal “cell
binding” portion ofthe Tch and/or Tch toxin.
In one embodiment an antibody according to the invention is suitable for neutralising
toxin A or toxin B.
Neutralising as employed herein is intended to refer to the ation or ion of
harmful/deleterious effects of the target toxin, for example at least a 50% reduction in the
relevant harmful effect.
The inventors have established by using internal comparisons n antibodies
discovered in this application and by comparison against antibodies well described in the art
(Babcock et a1. 2006; Lowy et a1., 2010) that some antibodies have the desirable characteristic
ofmaintaining effective neutralization (for e low ECso and high % protection) even at
high toxin concentrations. Other antibodies including those described in the art do not maintain
effective toxin neutralization at high toxin concentrations.
Effective toxin concentrations can be defined as a ‘lethal dose’ (LD) in titration studies
in the absence of lizing antibodies. Neutralisation assays are typically ted at an
3O ID of50% ofcomplete cell killing (226. an LD50) but may be more rigorously conducted at an
LDgo.
Assays may also be performed under considerably more challenging conditions such as
LD90, LD95 and/or LDmax (LDmax is the maximal toxin quantity which can be included in an
assay as constrained by assay volume and maximum toxin concentration / solubility). Such
assays aim to mimic the early stages of infection of humans when C. dz'fiicile growth in the
bowel is rampant and diarrhea and other symptoms lead one to esise that toxin
concentrations are at their highest. Antibodies which effectively neutralize ng toxin
activities under high toxin concentration conditions are thought by the present inventors to
have special clinical value for the control of symptoms in human infections. In one
embodiment the dy or antibodies of the present disclosure have useful, for example low
ECso values and/or high % protection from cell death for one or more the LDgo, LD90, LD95
and/or LDmaX. In one embodiment the EC50 in the one or more ofthe latter situations is
lSng/ml or less, for example l or less, such as Sng/ml or less, in particular lng/ml or
less. In one embodiment the % protection from cell death is >90%, or >75% or >50%.
Thus in one embodiment the present disclosure provides an antibody or a combination
of antibodies which maintain toxin neutralization even in the presence of high levels of toxin,
for example as measured in an assay provided herein.
The harmful effect n may, for example be measured in a suitable in vitro assay.
In one embodiment the lization is measured in an assay given in Example 1 below. Also
provided is an antibody or antibodies identified in a neutralization assay, for example wherein
the potency ofthe antibody is ined in the ce of high levels of toxin.
Toxin A is used interchangeably with Tch.
Toxin B is used interchangeably with Tch.
In one embodiment an antibody according to the invention is a monoclonal antibody or
binding fiagment thereof.
In one embodiment a monoclonal antibody according to the invention is capable of
neutralising Tch with very high potency and affinity.
In one embodiment a monoclonal antibody according to the invention is capable of
neutralising Tch with very high potency and affinity and high avidity.
Avidity as employed herein refers to the combined strength of multiple binding
affinities.
In one embodiment a monoclonal antibody according to the invention is capable of
neutralising Tch with very high potency and y and high y and high valency of
binding.
y ofbinding as employed herein refers to the ability for a monoclonal antibody
to bind to an antigen multiple times. High valency ofbinding hence results in high levels of
tion of n with antibodies and / or high levels of cross-linking oftoxin molecules,
which is thought to be advantageous.
Anti—Tch Mabs according to the present disclosure may be suitable for neutralising
the early effects ofTch, for example on cells such as loss of tight junctions.
Tight junction as employed herein is intended to refer to impermeable zone of
connection between cells within a mono layer or anatomical tissue structure. Fluid loss does
not occur when tight ons retain their structural and functional ity. Loss of tight
junctions is an indication that the cell has been compromised by toxin and is well documented
as being an early step in the toxic effects ofTch and Tch (25) and results in loss of fluid
containing serum, immunoglobulin and ions (26, 3). Loss oftight junctions is thought to be a
first step on the onset of oea in humans.
The TEER assay system, can be used to measure the loss oftight junction in vz'z‘ro.
TEER is an m for trans epithelial electric resistance assay and it is generally employed
to measure the permeability of a differentiated cell layer representative of a gut endothelial
lining. However, in the context of ing for antibodies TEER loss can be employed to
identify antibodies that slow or prevent damage to the tight junctions and hence is a surrogate
for protection against tissue damage leading to diarrhoea.
Often Caco-2 cells are employed since they are derived from human colon cells and are
known to form differentiated monolayers with cells connected by tight junctions. A kit is
commercially available from Becton—Dickinson named the Caco—2 BioCoat HTS plate system
(BD Biosciences/ 354802). The instructions in the kit are suitable for testing in the t
context. The resistance of the membrane changes when the membrane has been compromised.
Generally the antibody will be pre-incubated with the toxin before addition to the
TEER system to establish ifthe dy can prevent or slow the damage to the membrane
caused by the toxin. The assay may be performed over a suitable period, for example 24 hours
taking measurements at certain time-points. The present inventors have ished that the 4
hour time point is particularly discriminating for therapeutically useful antibodies.
The concentration n employed in the TEER assay is generally in the range 100-
200ng/ml, most preferably l25ng/m1
The concentration of antibody (for example IgG 1) employed in the TEER assay is
generally in the range of 4 to 2000ng/ml, for example 50 to lOOOng/ml, such as 100 to
SOOng/ml.
In one embodiment the EC50 ofthe antibody in the TEER assay employed in said
condition is at least 200ng/ml, for e less than lOOng/ml, such as about 60-80ng/ml.
In one embodiment there is provided an anti-Tch antibody or an anti-Tch antibody
suitable for use as a therapeutic agent in the treatment or prevention of C. diflicile infection,
wherein said antibody was screened and selected employing a TEER assay.
In one aspect there is ed a method of screening an antibody in a TEER assay for
the ability to slow or t loss of tight junctions. In one embodiment the antibody or
antibodies screened are anti-Tch antibodies. In one embodiment the antibody or antibodies
screened are anti—Tch antibodies. In one embodiment the antibody or antibodies screened are
a combination of anti-Tch and anti-Tch antibodies. In one embodiment the method
comprises the step of identifying an appropriate dy or antibodies and expressing suitable
quantities of same. In one embodiment the method comprises the r step of formulating
said antibody or antibodies in a pharmaceutical ation. In one embodiment the method
comprises the further step of administering said antibody or antibodies or said formulation to a
patient in need thereof.
In one embodiment multiple antibodies ofthe disclosure may be capable ofbinding to
the target toxin (Tch or Tch), which may aid immune clearance ofthe toxin.
Multiple antibodies as employed herein is ed to refer to multiple copies of an
antibody with the same sequence or an antibody with the same amino acid sequence or an
antibody specific to the same target antigen but with a different amino acid sequence.
In one embodiment the antibodies according to the invention are specific to the target
antigen, for e specific to an epitope in the target antigen.
In one embodiment the antibodies ofthe ion are able to bind to the target antigen
in two or more locations, for example two or three locations, such as four, five, six, seven,
eight, nine, ten or more locations, for example the toxin may comprise repeating domains and
thus an antibody may be specific to an e and in fact that epitope may be present in the
antigen several times i.e. in more than one location. Thus given antibodies may bind the same
e multiple times in ent locations in the n.
In one embodiment the antibody binds to the given antigen le times, for example
2 to 20 times such as 3, 4, 5, 6, 7, 8, 9, 10, ll, 12, l3, I4, 15 or 16 times. In one embodiment
the antibody binds the given antigen at least 3 times. This multiple binding is thought to be
important in lisation and/or clearance of the toxin. Whilst not Wishing to be bound by
theory it is thought that multiple binding, for example 3 more times, i.e. by tion with 3
or more Fc fragments is important in ring rapid clearance ofthe toxin (24) primarily via
the liver and spleen (27, 28).
In one embodiment the anti-Tch antibody binds 3 or more times, for example 3 to 16
times.
In one embodiment the anti-Tch antibody binds 12 times.
In one embodiment the anti-Tch antibody binds 2 times.
In one embodiment an anti-Tch antibody binds in the catalytic-terminal cell binding
domain ofTch.
In one embodiment the anti-Ted B antibody binds 2 or more times, for example 2 times.
W0 2013i038156
In one embodiment an anti—Tch antibody binds in the catalytic—terminal cell binding
domain ofTch.
In one embodiment the antibody or antibodies according to disclosure are capable of
cross-linking toxin molecules, for example one arm of the antibody molecule binds one toxin
molecule and another ofthe antibody binds a epitope in a different toxin molecule, thereby
forming a sort ofimmune complex. The formation of the latter may also tate activation of
the immune system to clear the relate toxin and thereby minimise the deleterious in vivo effects
ofthe same.
In one embodiment an innate immune response, such as complement is ted.
In one embodiment the antibody or dies ofthe disclosure have high potency
against toxins derived from strains of different ribotypes, for example 003, 027, 078.
In one embodiment dies against Tch may have an EC50 in the range of 0.1 —
lOOng/ml, such as l to l and a maximal inhibition in the range of % at toxin
concentrations of 5, for example against toxins fiom strains ofribotypes 003, 027 and
078.
In one embodiment antibodies against Tch may have an EC50 in the range of 0.1 —
100ng/ml, such as l to 10ng/ml and a maximal tion in the range of 60- 100%, 70— 100%,
80- 100% or 90-100% at toxin concentrations of LDgo_95, for example against toxins from
strains of pes 003, 027 and 078.
In one embodiment dies against Tch may have EC50 in the range of 0.1 —
lOOng/ml, such as 1 to lOng/ml and a maximal inhibition in the range of 50— 100% at toxin
concentrations of LD30_95, for example against toxins from strains ofribotype 003.
In one embodiment antibodies against Tch may have EC50 in the range of 0.1 —
lOOng/ml, such as 1 to 10ng/ml and a maximal inhibition in the range of60- 100%, 70-100%,
80~100% or % at toxin concentrations of LD80_95, for example against toxins from
strains of ribotype 003.
In one embodiment there are provided ations of antibodies according to the
invention, for example combinations of antibodies specific to Tch, combinations of
antibodies specific to Tch or combinations of antibodies to specific to Tch and antibodies
specific to Tch.
Combinations of dies specific to Tch will generally refer to combinations of
antibodies directed to different epitopes on the target antigen Tch, or at least with different
binding properties.
W0 20131038156 2012/052222
ations of antibodies specific to Tch will lly refer to combinations of
antibodies directed to different epitopes on the target antigen Tch, or at least with different
g properties.
The combinations may comprise 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or 15 distinct
antibodies, for example 2, 3, 4 or 5 antibodies.
In one embodiment there is provided a combination of one anti-Tch antibody and two
anti-Tch, for example wherein the anti—Tch antibody is 997 and where the anti-Tch
antibodies are 1125 and 1151
In particular there is ed a combination ofone anti-Tch antibody comprising a
heavy variable region with a sequence as shown in SEQ ID NO:49 and a light variable region
with a sequence shown in SEQ ID NO: 47 and two anti-Tch antibodies the first with a heavy
variable region shown in SEQ ID NO: 129 and a light variable region shown in SEQ ID NO:
127, and the second with a heavy variable region shown in SEQ ID NO: l59 and light variable
region shown in SEQ ID NO: 157.
Distinct antibodies as employed herein is intended to refer to antibodies with ent
amino acid sequences, which may bind the same e or different es on the target
antigen.
Also provided by the present invention is a specific region or e ofTch which is
bound by an antibody provided by the present invention, in particular an antibody comprising the
heavy chain sequence given in SEQ ID NO:49 and the light chain sequence given in SEQ ID
NO:47.
Also provided by the present invention is a specific region or epitope ofTch which is
bound by an antibody provided by the t invention, in particular an antibody comprising the
heavy chain sequence given in SEQ ID NO:129 and the light chain sequence given in SEQ ID
NO: 127 or an antibody comprising the heavy chain sequence given in SEQ ID NO: 159 and the
light chain sequence given in SEQ ID NO: 157.
This specific region or epitope ofthe Tch or Tch toxins can be identified by any
suitable epitope mapping method known in the art in combination with any one of the antibodies
ed by the present invention. Examples of such methods include screening peptides of
3O varying lengths d from the toxins for binding to the antibody of the present invention with
the smallest fragment that can specifically bind to the antibody containing the sequence ofthe
epitope recognised by the antibody. The peptides may be produced synthetically or by
proteolytic digestion ofthe toxin polypeptide. Peptides that bind the antibody can be identified
by, for example, mass spectrometric analysis. In another example, NMR spectroscopy or X—ray
crystallography can be used to identify the epitope bound by an dy of the present invention.
WO 38156 2012/052222
Once fied, the epitopic fragment which binds an antibody of the present invention can be
used, ifrequired, as an imrnunogen to obtain additional antagonistic dies which bind the
same epitope.
Antibodies which cross-block the binding of an antibody according to the present
invention may be similarly useful in neutralizing toxin activity. Accordingly, the present
invention also provides a neutralizing antibody having specificity for Tch or Tch, which
cross-blocks the binding of any one ofthe antibodies described above to Tch or Tch and/or
is cross-blocked from binding these toxins by any one of those antibodies. In one embodiment,
such an antibody binds to the same e as an antibody described herein above. In another
embodiment the cross-blocking neutralising antibody binds to an epitope which borders and/or
overlaps with the epitope bound by an antibody described herein above. In another
embodiment the blocking neutralising antibody of this aspect ofthe ion does not
bind to the same epitope as an dy ofthe present invention or an epitope that borders
and/or overlaps with said epitope.
blocking antibodies can be identified using any suitable method in the art, for
example by using competition ELISA or BIAcore assays where binding ofthe cross blocking
antibody to Tch or Tch prevents the binding of an antibody ofthe present invention or vice
versa.
In one embodiment there is provided a method of generating an anti—Tch or anti—Tch
dy, in particular a neutralizing antibody and/or an antibody which cross—blocks the
binding of an antibody described herein, said method sing the steps of immunizing a
host with a suitable n, for example an antigen shown in any one of SEQ ID Nos 173 to
194 or a combination thereof. The said method may also comprise one or more the following
steps, for e identifying an antibody of interest (in particular using a functional assay
such as TEER assay), expressing the antibody of interest, and optionally formulating the
antibody as a pharmaceutically able composition.
Thus in one aspect the present disclosure provides a method of immunizing a host with
an amino acid sequence shown in SEQ ID Nos 173 to 194 or a combination thereof.
In one embodiment the antibodies according to the invention have an affinity to the
target antigen of 10nM or less, for example lnM or less such as 900pM, in particular SOOpM,
700pM, 600pM orSOOpM, such as 60pM.
In one embodiment the affinity is for Tch or Tch or a fragment thereof. In one
example the fragment is Tch123 corresponding to residues S 1827-D2249 of Tch. In one
example the fragment is Tch456 corresponding to residues G2205-R2608. In one
embodiment the t is Tch 1234 corresponding to residues S 1833—E2366 ofTch.
In one embodiment antibodies according to the invention or a combination thereof have
an ECso of200ng/ml or less, for example lSOng/ml or less such as 100ng/ml or less, such as in
the range 0.1 to lOng/ml.
The individual component antibodies of mixtures are not required to have an EC50 in
said range provided that when they are used in combination with one or more antibodies the
combination has an EC50 in said range.
ageously, the antibodies of the invention are stable, for e are thermally
stable at temperatures above 50°C such as 60 or 70°C.
The antibodies and combinations according to the t invention also have one or
more ofthe following advantageous properties: slow off rate, high affinity, high potency, the
ability to bind multiple times to the target n, to neutralise the toxin by a mechanism
which reduces the loss of able TEER activity, to stimulate or assist the hosts natural
immune response, to catalyse or assist in immune clearance of the pathogen (or toxin) and/or to
educate the immune system to respond appropriately to the pathogen (or toxin).
The residues in dy variable domains are conventionally numbered according to a
system devised by Kabat et al. This system is set forth in Kabat et al., 1987, in Sequences of
Proteins ofImmunological Interest, US Department of Health and Human Services, NIH, USA
(hereafter “Kabat et al. (supra)”). This numbering system is used in the present specification
except where otherwise indicated.
The Kabat residue designations do not always correspond directly with the linear
numbering ofthe amino acid residues. The actual linear amino acid sequence may contain
fewer or additional amino acids than in the strict Kabat numbering corresponding to a
ning of, or insertion into, a structural component, whether framework or
complementarity determining region (CDR), of the basic variable domain structure. The
correct Kabat ing of residues may be determined for a given antibody by alignment of
residues ofhomology in the sequence ofthe antibody with a ard” Kabat numbered
sequence.
The CDRs ofthe heavy chain variable domain are located at residues 31-35 (CDR—Hl),
residues 50-65 (CDR-HZ) and residues 95- 102 (CDR—H3) according to the Kabat numbering
system. r, according to Chothia (Chothia, C. and Lesk, AM. J. Mol. Biol, 196, 901-
917 (1987)), the loop equivalent to CDR—Hl extends from residue 26 to residue 32. Thus
unless indicated ise ‘CDR—Hl’ as employed herein is intended to refer to residues 26 to
W0 2013l038156
, as described by a ation of the Kabat numbering system and a’s topological
loop definition.
The CDRs ofthe light chain le domain are located at residues 24-34 (CDR—Ll),
residues 50-56 (CDR-LZ) and residues 89-97 (CDR-L3) according to the Kabat numbering
system.
Antibodies for use in the present invention may be obtained using any le method
known in the art. The toxin A and/or toxin B polypeptide/protein including fusion proteins, for
example toxin-Fe fusions proteins or cells (recombinantly or naturally) expressing the
polypeptide (such as activated T cells) can be used to produce antibodies which specifically
recognise the target toxins. The toxin polypeptide may be the full length polypeptide or a
biologically active fragment or tive thereof.
Polypeptides may be prepared by processes well known in the art from genetically
engineered host cells comprising expression systems or they may be recovered from natural
biological sources. In the present application, the term “polypeptides” es es,
polypeptides and proteins. These are used interchangeably unless otherwise specified. The
ce for Tch from ribotype 027 is given in SEQ ID NO: 171 (Uniprot accession number
C9YJ37) and the sequence for Tch from ribotype 027 is given is SEQ ID NO: 172 (Uniprot
accession number C9YJ35).
The antigen polypeptide may in some ces be part of a larger protein such as a
fusion n for example fused to an affinity tag.
Antibodies generated against the antigen polypeptide may be obtained, where
sation of an animal is necessary, by administering the polypeptides to an animal,
preferably a non—human animal, using well-known and routine ols, see for example
Handbook of Experimental Immunology, D. M. Weir (ed), Vol 4, Blackwell Scientific
Publishers, Oxford, England, 1986). Many warm-blooded animals, such as rabbits, mice, rats,
sheep, cows, camels or pigs may be immunized. However, mice, rabbits, pigs and rats are
generally most suitable.
Monoclonal antibodies may be prepared by any method known in the art such as the
hybridoma technique (Kohler & Milstein, l975, Nature, 256:495-497), the trioma technique,
the human B-cell hybridoma technique (Kozbor et al., 1983, Immunology Today, 4:72) and the
EBV-hybridoma technique (Cole et al., Monoclonal Antibodies and Cancer Therapy, pp77-96,
Alan R Liss, Inc., 1985).
Antibodies for use in the invention may also be generated using single lymphocyte
antibody methods by g and expressing immunoglobulin variable region cDNAs
generated from single lymphocytes ed for the production of specific antibodies by, for
example, the methods described by Babcook, J. et al., 1996, Proc. Natl. Acad. Sci. USA
93(15):7843-78481; WO92/02551; WO2004/051268 and International Patent Application
number WO2004/ 106377.
Humanised antibodies (which include CDR-grafted antibodies) are antibody molecules
having one or more complementarity determining regions (CDRs) from a non—human s
and a framework region fi'om a human immunoglobulin molecule (see, e.g. US 5,585,089;
W09 1/09967). It will be appreciated that it may only be necessary to transfer the city
determining residues ofthe CDRs rather than the entire CDR (see for example, Kashmiri et al.,
2005, Methods, 36, 25-34). Humanised antibodies may ally further comprise one or
more framework residues derived from the non-human species from which the CDRs were
derived.
As used herein, the term ‘humanised antibody molecule’ refers to an antibody molecule
wherein the heavy and/or light chain contains one or more CDRs (including, if desired, one or
more modified CDRs) from a donor antibody (e.g. a murine monoclonal antibody) grafied into
a heavy and/or light chain variable region framework of an acceptor dy (e.g. a human
antibody). For a review, see Vaughan et al, Nature Biotechnology, 16, 535-539, 1998. In one
embodiment rather than the entire CDR being transferred, only one or more ofthe specificity
determining residues from any one ofthe CDRs described herein above are transferred to the
human antibody ork (see for example, Kashmiri et al., 2005, Methods, 36, 25-34). In
one embodiment only the specificity ining residues from one or more of the CDRs
described herein above are transferred to the human dy framework. In another
embodiment only the specificity ining residues from each of the CDRs described herein
above are transferred to the human antibody ork.
When the CDRs or specificity determining residues are grafted, any riate
acceptor variable region framework sequence may be used having regard to the class/type of
the donor antibody from which the CDRS are d, ing mouse, e and human
framework regions. ly, the humanised antibody according to the present invention has a
variable domain comprising human acceptor framework regions as well as one or more of the
CDRs provided herein.
Thus, provided in one embodiment is a humanised antibody which binds toxin A or
toxin B wherein the variable domain comprises human acceptor framework regions and non-
human donor CDRs.
Examples ofhuman frameworks which can be used in the t invention are KOL,
NEWM, REI, EU, TUR, TEI, LAY and POM (Kabat et al., supra). For example, KOL and
NEWM can be used for the heavy chain, REI can be used for the light chain and EU, LAY and
POM can be used for both the heavy chain and the light chain. Alternatively, human germline
sequences may be used; these are available at: http://vbase.rnrc-cpe.cam.ac.uk/
In a humanised antibody of the present invention, the acceptor heavy and light chains
do not necessarily need to be d from the same antibody and may, if desired, comprise
composite chains having framework regions derived from different .
Also, in a humanised antibody of the present invention, the framework s need not
have exactly the same sequence as those ofthe acceptor dy. For instance, unusual
residues may be changed to more frequently-occurring residues for that acceptor chain class or
type. Alternatively, selected es in the acceptor framework regions may be changed so
that they correspond to the residue found at the same position in the donor dy (see
Reichmann et a1., 1998, Nature, 332, 323-324). Such changes should be kept to the minimum
necessary to recover the affinity of the donor antibody. A protocol for selecting residues in the
acceptor framework regions which may need to be changed is set forth in WO 91/09967.
lly the antibody sequences disclosed in the present specification are sed.
The invention also provides sequences which are 80%, 90%, 91%, 92%, 93% 94%,
95% 96%, 97%, 98% or 99% similar to a sequence or antibody disclosed herein.
"Identity", as used herein, indicates that at any ular position in the aligned
sequences, the amino acid residue is cal between the sequences. "Similarity", as used
herein, indicates that, at any particular position in the aligned sequences, the amino acid
residue is of a similar type between the sequences. For example, leucine may be substituted for
isoleucine or valine. Other amino acids which can often be substituted for one another include
but are not d to:
- alanine, tyrosine and tryptophan (amino acids having aromatic side chains);
— lysine, arginine and histidine (amino acids having basic side chains);
- aspartate and glutamate (amino acids having acidic side chains);
— asparagine and glutamine (amino acids having amide side chains); and
— ne and methionine (amino acids having r-containing side chains).
Degrees of identity and similarity can be readily calculated (Computational Molecular Biology,
Lesk, A.M., ed., Oxford University Press, New York, 1988; Biocomputing. Informatics and
Genome ts, Smith, D.W., ed., Academic Press, New York, 1993; Computer Analysis of
Sequence Data, Part 1, Griffin, A.M., and , H.G., eds, Humana Press, New Jersey,
1994; Sequence Analysis in Molecular Biology, von Heinje, G., Academic Press, 1987,
Sequence Analysis Primer, Gribskov, M. and Devereux, J., eds, M Stockton Press, New York,
1991, the BLASTTM software available from NCBI (Altschul, S.F. et a1., 1990, J. Mol. Biol.
3—410; Gish, W. & States, DJ. 1993, Nature Genet. 31266-272. Madden, T.L. et a1.,
PCT/GBZOl2/052222
1996, Meth. Enzymol. 1-141; Altschul, S.F. et al., 1997, Nucleic Acids Res. 25:3389—
3402; Zhang, J. & Madden, TL. 1997, Genome Res. 7:649-656,).
The antibody molecules ofthe present invention include a complete antibody molecule
having full length heavy and light chains or a fragment thereof and may be, but are not limited
to Fab, modified Fab, Fab’, modified Fab”, F(ab’)2, Fv, Fab-Fv, Fab-dsFV, single domain
dies (e.g. VH or VL or VHH), scFv, bi, tri or valent antibodies, Bis-scFv, diabodies,
triabodies, tetrabodies and epitope—binding fragments of any of the above (see for example
Holliger and Hudson, 2005, Nature Biotech. 23(9):l 126-1 136; Adair and Lawson, 2005, Drug
Design Reviews - Online 2(3), 209-217). The methods for creating and manufacturing these
antibody nts are well known in the art (see for example Verma et al., 1998, Journal of
Immunological Methods, 216, 165—181). Other antibody fragments for use in the t
invention include the Fab and Fab’ fragments described in International patent applications
WO2005/003169, WO2005/003 170 and W02005/003l71. valent antibodies may
comprise multiple specificities e.g bispecific or may be monospecific (see for example WO
92/22853 and W005/113605). Bispecific and multispecific antibody variants are especially
considered in this example since the aim is to lise two independent target proteins: Tch
and Tch. Variable regions from antibodies disclosed herein may be configured in such a way
as to produce a single antibody variant which is e of g to and neutralising Tch
and Tch.
In one embodiment the antibody according to the present disclosure is provided as
Tch or Tch binding antibody fusion protein which comprises an immunoglobulin ,
for example a Fab or Fab’ fragment, and one or two single domain antibodies (dAb) linked
directly or indirectly thereto, for example as described in WO2009/040562.
In one embodiment the fusion protein comprises two domain antibodies, for example as
a variable heavy (VH) and variable light (VL) pairing, optionally linked by a disulphide bond,
for e as described in WO2010/035012.
In one embodiment the Fab or Fab’ element of the fusion protein has the same or
similar city to the single domain antibody or antibodies. In one embodiment the Fab or
Fab’ has a ent specificity to the single domain antibody or antibodies, that is to say the
fusion protein is multivalent. In one ment a multivalent fusion protein according to the
present invention has an albumin binding site, for example a VH/VL pair therein provides an
albumin g site.
In one embodiment the alent fusion protein according to the invention binds
Tch and Tch.
In one embodiment the multivalent fusion protein according to the invention binds
Tch in multiple ons, for e has distinct g regions specific for two different
epitopes.
The constant region domains of the antibody molecule of the t invention, if
t, may be selected having regard to the proposed function of the antibody molecule, and
in particular the effector functions which may be required. For example, the constant region
domains may be human IgA, IgD, IgE, IgG or IgM domains. In particular, human IgG
constant region domains may be used, especially of the IgG1 and IgG3 isotypes when the
antibody molecule is intended for therapeutic uses and antibody effector ons are required.
Alternatively, IgG2 and IgG4 isotypes may be used when the antibody le is intended for
therapeutic purposes and antibody effector functions are not required, e.g. for simply
neutralising or agonising an antigen. It will be appreciated that sequence variants of these
constant region domains may also be used. For example IgG4 molecules in which the serine at
position 241 has been changed to proline as described in Angal et al., Molecular Immunology,
1993, 30 (I), 105-108 may be used. It will also be understood by one skilled in the art that
antibodies may undergo a variety of posttranslational modifications. The type and extent of
these modifications ofien depends on the host cell line used to express the antibody as well as
the culture conditions. Such modifications may include variations in glycosylation, methionine
oxidation, diketopiperazine formation, aspartate isomerization and asparagine deamidation. A
frequent modification is the loss of a carboxy—terminal basic residue (such as lysine or
arginine) due to the action of carboxypeptidases (as described in Harris, RJ. Journal of
Chromatography 705: 129—134, 1995).
In one embodiment the dy heavy chain comprises a CH1 domain and the
antibody light chain comprises a CL domain, either kappa or lambda.
Biological molecules, such as dies or fragments, contain acidic and/or basic
functional groups, thereby giving the molecule a net positive or negative charge. The amount
of l “observed” charge will depend on the absolute amino acid sequence ofthe entity, the
local nment of the charged groups in the 3D structure and the environmental conditions
ofthe molecule. The isoelectric point (pI) is the pH at which a particular molecule or solvent
accessible surface thereof carries no net electrical . In one e, the dy and
fragments ofthe invention may be engineered to have an appropriate isoelectric point. This
may lead to antibodies and/or fragments with more robust properties, in particular suitable
solubility and/or stability profiles and/or improved cation teristics.
Thus in one aspect the invention provides a humanised antibody engineered to have an
isoelectric point different to that of the originally fied antibody from which it is derived.
The antibody may, for example be ered by replacing an amino acid residue such as
replacing an acidic amino acid residue with one or more basic amino acid residues.
atively, basic amino acid residues may be introduced or acidic amino acid residues can
be removed. Alternatively, if the molecule has an unacceptably high pI value acidic residues
may be introduced to lower the pl, as required. It is important that when manipulating the p1
care must be taken to retain the desirable ty of the dy or fragment. Thus in one
embodiment the engineered antibody or fragment has the same or substantially the same
ty as the “unmodified” antibody or fragment.
ms such as ** EXPASY http://www.expasy.ch/tools/pi_tool.html, and
http://www.iut-arles.up.univ-mrs.fr/w3bb/d_abim/compo-p.html, may be used to predict the
isoelectric point ofthe antibody or fragment.
It will be appreciated that the affinity of antibodies provided by the t invention
may be altered using any suitable method known in the art. The affinity ofthe antibodies or
variants thereofmay be ed using any suitable method known in the art, including
BIAcore, using an appropriate isolated natural or recombinant protein or a le fusion
protein/polypeptide.
The present invention therefore also relates to variants of the antibody molecules of the
present invention, which have an improved affinity for Tch or Tch, as riate. Such
variants can be obtained by a number of affinity maturation protocols including mutating the
CDRs (Yang et al., J. Mol. Biol., 254, 392-403, 1995), chain shuffling (Marks et al.,
Bio/Technology, 10, 779-783, l992), use of mutator strains of E. coli (Low et al., J. Mol. Biol,
250, 359-368, 1996), DNA shuffling (Patten et al., Curr. Opin. Biotechnol, 8, 724—733, 1997),
phage display (Thompson et al., J . Mol. Biol, 256, 77-88, 1996) and sexual PCR (Crameri et
al., Nature, 391, 288-291, 1998). Vaughan et a1. (supra) discusses these methods of affinity
maturation.
Improved affinity as employed herein in this context refers to an improvement refers to
an improvement over the starting molecule.
If desired an antibody for use in the present invention may be ated to one or
more effector molecule(s). It will be appreciated that the effector molecule may comprise a
single effector molecule or two or more such molecules so linked as to form a single moiety
that can be attached to the antibodies of the present invention. Where it is desired to obtain an
antibody fragment linked to an or molecule, this may be ed by standard chemical
or recombinant DNA procedures in which the antibody fragment is linked either directly or via
a coupling agent to the effector molecule. Techniques for conjugating such effector les
to antibodies are well known in the art (see, Hellstrom et al., Controlled Drug Delivery, 2nd
Ed., Robinson et al., eds, 1987, pp. 623—53; Thorpe et al., 1982 , Immunol. Rev, 62:1 19-58
and Dubowchik et al., 1999, Pharmacology and Therapeutics, 83, 67-123). ular
chemical procedures include, for example, those described in WO 93/06231, WO 92/22583,
WO 95, WO 89/01476 and WOO3031581. Alternatively, where the effector molecule is
a protein or polypeptide the linkage may be achieved using recombinant DNA procedures, for
example as described in WO 33 and EP0392745.
The term effector molecule as used herein includes, for e, biologically active
proteins, for example enzymes, other antibody or antibody fragments, synthetic or naturally
occurring polymers, nucleic acids and fragments thereof e.g. DNA, RNA and nts
thereof, radionuclides, ularly radioiodide, radioisotopes, chelated metals, nanoparticles
and reporter groups such as fluorescent nds or compounds which may be detected by
NMR or ESR spectroscopy.
Other effector les may include chelated radionuclides such as 1 1 Mn and 90Y,
Lul77, Bismuth213, Californium252, Iridiuml92 and Tungsten188/Rhenium188; or drugs
such as but not limited to, hosphocholines, topoisomerase I inhibitors, taxoids and
suramin.
Other effector molecules include proteins, peptides and enzymes. Enzymes of interest
include, but are not limited to, proteolytic enzymes, hydrolases, lyases, isomerases,
transferases. Proteins, polypeptides and peptides of interest e, but are not limited to,
immunoglobulins, toxins such as abrin, ricin A, pseudomonas exotoxin, or diphtheria toxin, a
n such as insulin, tumour necrosis factor, ct-interferon, B—interferon, nerve growth factor,
platelet derived growth factor or tissue plasminogen activator, a thrombotic agent or an anti-
angiogenic agent, e.g. angiostatin or endostatin, or, a biological response modifier such as a
lymphokine, eukin—1 (IL—1), interleukin-2 (IL-2), granulocyte macrophage colony
stimulating factor (GM—CSF), granulocyte colony stimulating factor (G—CSF), nerve growth
factor (NGF) or other growth factor and immunoglobulins.
Other effector molecules may include detectable substances useful for example in
diagnosis. Examples of detectable substances include various enzymes, etic groups,
fluorescent materials, luminescent materials, bioluminescent materials, radioactive nuclides,
positron emitting metals (for use in positron emission aphy), and nonradioactive
gnetic metal ions. See generally US. Patent No. 4,741,900 for metal ions which can be
conjugated to antibodies for use as diagnostics. Suitable enzymes include horseradish
peroxidase, alkaline phosphatase, beta-galactosidase, or acetylcholinesterase; suitable
prosthetic groups include avidin, avidin and biotin; le fluorescent als include
umbelliferone, fluorescein, fluorescein isothiocyanate, ine, dichlorotriazinylamine
W0 2013I038156
fluorescein, dansyl chloride and phycoerythrin; suitable luminescent materials include luminol;
le bioluminescent materials include luciferase, luciferin, and aequorin; and suitable
radioactive nuclides include 1251, 1311, lllIn and 99Tc.
In another example the effector molecule may increase the half-life of the antibody in
vivo, and/or reduce immunogenicity ofthe antibody and/or enhance the delivery of an antibody
across an epithelial r to the immune system. Examples of le effector molecules of
this type include polymers, albumin, albumin binding ns or albumin binding nds
such as those described in W005/117984.
Where the effector molecule is a polymer it may, in general, be a synthetic or a
naturally occurring polymer, for e an optionally substituted ht or branched chain
polyalkylene, polyalkenylene or polyoxyalkylene polymer or a branched or unbranched
polysaccharide, e.g. a homo- or hetero- polysaccharide.
Specific optional substituents which may be present on the above-mentioned synthetic
polymers include one or more y, methyl or methoxy groups.
c examples of synthetic polymers include optionally substituted straight or
branched chain poly(ethyleneglycol), poly(propyleneglycol) poly(vinylalcohol) or derivatives
thereof, especially optionally substituted poly(ethyleneglycol) such as
methoxypoly(ethyleneglycol) or derivatives thereof.
Specific naturally occurring polymers include lactose, amylose, dextran, glycogen or
derivatives thereof.
“Derivatives” as used herein is intended to include reactive derivatives, for example
thiol-selective reactive groups such as maleimides and the like. The reactive group may be
linked directly or h a linker segment to the polymer. It will be appreciated that the
e of such a group will in some instances form part of the product as the linking group
between the dy fragment and the polymer.
The size of the polymer may be varied as d, but will generally be in an average
molecular weight range from 500Da to 50000Da, for example from 5000 to a such as
from 20000 to a. The polymer size may in particular be selected on the basis ofthe
intended use of the product for example y to localize to certain tissues such as tumors or
extend circulating half-life (for review see Chapman, 2002, Advanced Drug Delivery Reviews,
54, 531-545). Thus, for example, where the t is intended to leave the circulation and
penetrate tissue, for example for use in the treatment of a tumour, it may be advantageous to
use a small molecular weight polymer, for example with a molecular weight of around 5000Da.
For applications where the product remains in the ation, it may be advantageous to use a
higher molecular weight polymer, for example having a molecular weight in the range from
20000Da to 40000Da.
Suitable polymers e a kylene polymer, such as a poly(ethyleneglycol) or,
especially, a ypoly(ethyleneglycol) or a derivative thereof, and ally with a
molecular weight in the range fi'om about lSOOODa to about 40000Da.
In one example antibodies for use in the present invention are ed to
poly(ethyleneglycol) (PEG) moieties. In one particular example the antibody is an dy
fragment and the PEG molecules may be attached through any available amino acid side-chain
or terminal amino acid functional group d in the antibody fragment, for example any free
amino, imino, thiol, hydroxyl or carboxyl group. Such amino acids may occur naturally in the
antibody fragment or may be engineered into the fragment using recombinant DNA methods
(see for e US 5,219,996; US 5,667,425; WO98/2597l, W02008/038024). In one
e the antibody molecule of the present ion is a modified Fab fragment wherein the
modification is the addition to the C-terminal end of its heavy chain one or more amino acids
to allow the attachment of an effector molecule. Suitably, the additional amino acids form a
modified hinge region containing one or more cysteine residues to which the effector molecule
may be attached. Multiple sites can be used to attach two or more PEG molecules.
Suitably PEG molecules are covalently linked through a thiol group of at least one
cysteine residue located in the antibody fragment. Each polymer molecule attached to the
modified antibody fragment may be covalently linked to the r atom of a cysteine residue
located in the fragment. The covalent linkage will generally be a disulphide bond or, in
particular, a sulphur—carbon bond. Where a thiol group is used as the point of attachment
riately activated effector molecules, for example thiol selective derivatives such as
maleimides and cysteine derivatives may be used. An activated polymer may be used as the
starting material in the preparation ofpolymer—modified antibody fragments as described
above. The activated r may be any polymer containing a thiol reactive group such as an
a-halocarboxylic acid or ester, eg. iodoacetamide, an imide, e.g. maleimide, a vinyl sulphone
or a disulphide. Such starting als may be obtained commercially (for example from
Nektar, formerly Shearwater Polymers Inc., Huntsville, AL, USA) or may be prepared from
commercially available starting materials using conventional chemical procedures. Particular
PEG molecules include 20K methoxy—PEG-amine (obtainable from Nektar, formerly
Shearwater; Rapp Polymere; and SunBio) and M-PEG-SPA (obtainable from Nektar, formerly
Shearwater).
In one ment, the antibody is a modified Fab fragment or diFab which is
ted, i.e. has PEG (poly(ethyleneglycol)) ntly attached thereto, e.g. according to
the method disclosed in EP 4 or EP1090037 [see also "Poly(ethyleneglycol) Chemistry,
Biotechnical and Biomedical Applications", 1992, J. Milton Harris (ed), Plenum Press, New
York, "Poly(ethyleneglycol) Chemistry and Biological Applications", 1997, J. Milton Harris
and S. Zalipsky (eds), American Chemical Society, gton DC and "Bioconjugation
Protein Coupling Techniques for the Biomedical Sciences", 1998, M. Aslam and A. Dent,
Grove Publishers, New York; Chapman, A. 2002, Advanced Drug Delivery Reviews 2002,
54:531-545]. In one example PEG is attached to a ne in the hinge region. In one
example, a PEG modified Fab fragment has a maleimide group covalently linked to a single
thiol group in a modified hinge region. A lysine residue may be covalently linked to the
maleimide group and to each ofthe amine groups on the lysine residue may be attached a
methoxypoly(ethyleneglycol) polymer having a molecular weight of approximately 20,000Da.
The total lar weight of the PEG attached to the Fab fragment may therefore be
approximately 40,000Da.
Particular PEG molecules e 2~[3—(N-maleimido)propionamido]ethyl amide of
N,N’-bis(methoxypoly(ethylene glycol) MW 20,000) modified lysine, also known as
L40K (obtainable from Nektar, formerly Shearwater).
Alternative sources ofPEG linkers include NOF who supply GL2—400MA2 (wherein rn
in the structure below is 5) and GL2-400MA (where m is 2) and n is imately 450:
Mamasmergeiw
HSCG-{CHECHEO}I;’/L\§ if: Q
Q\fx“\\w_, SEXY/I {882% ‘xNx‘f’i‘
{E ,x’Lmif
m is 2 or 5
That is to say each PEG is about 20,000Da.
Further alternative PEG effector molecules ofthe ing type:
CHSO—(CH20H20)n
CHZCHZO)n /
are available from Dr Reddy, NOF and Jenkem. O
In one embodiment there is provided an antibody which is PEGylated (for example
with a PEG described ), attached through a cysteine amino acid residue at or about amino
acid 226 in the chain, for example amino acid 226 of the heavy chain (by sequential
numbering).
In one embodiment one certain antibodies according to the present disclosure have the
in; pro 0 erties:
The t invention also provides compositions such as a pharmaceutical composition
of antibody or combination of antibodies defined .
The present invention also provides a composition that comprises at least two
antibodies according to the invention, for e wherein at least one antibody therein is
specific to Tch and at least one antibody therein is specific to Tch or alternatively at least
two antibodies c to Tch or at least two antibodies specific to Tch.
In one embodiment there is provided a composition that comprises multiple antibodies
specific to Tch and optionally one or more antibodies c to Tch.
In one embodiment there is ed a composition that comprises multiple antibodies
specific to Tch and optionally one or more antibodies specific to Tch.
Thus in one embodiment there is provided a composition sing 2, 3, 4, 5, 6, 7, 8,
9, 10, ll, l2, l3, 14 or 15 antibodies according to the invention i.e. distinct antibodies.
The ion describes one particular mixture comprising 3 Mabs, one Mab of which
is specific for Tch and two Mabs of which are c for Tch. This mixture demonstrated
very high levels of protection from death and gut inflammation from a lethal infective oral dose
of Clostrz‘dz'um diflicz'le in hamsters.
In particular there is provided a composition comprising a combination of one anti—
Tch antibody comprising a heavy variable region with a sequence as shown in SEQ ID
NO:49 and a light variable region with a sequence shown in SEQ ID NO: 47 and two anti-
WO 38156
Tch the first with a heavy variable region shown in SEQ ID NO: 129 and a light variable
region shown in SEQ ID NO: 127, and the second with a heavy variable region shown in SEQ
ID NO: 159 and light variable region shown in SEQ ID NO: 157.
In one embodiment wherein the composition comprises 3 antibodies, such as one anti-
Tch and two anti-Tch antibodies the antibodies are in the ratio of 50%, 25% and 25%
respectively ofthe total antibody content thereof.
In one embodiment there is provided a composition comprising 2, 3, 4 or 5 antibodies
c to Tch and optionally l, 2, 3, 4 or 5 antibodies specific to Tch.
In one embodiment the compositions provided according to the invention are well
defined, for example are mixtures of monoclonal dies rather than simply polyclonal
compositions derived from an immunised or immune ent host.
In one embodiment the composition of antibodies has an ECso of 200ng/ml or less, for
example lSOng/ml or less, such as lOOng/ml or less, such as 0.1 to lOng/ml.
Advantageously the antibodies bed herein have very high levels of biophysical
stability and so are le for inclusion in mixtures of antibodies.
In one aspect a pharmaceutical formulation or composition according to the invention
further comprises a pharmaceutically acceptable excipient.
Phannaceutically acceptable carriers in therapeutic compositions may additionally
contain liquids such as water, saline, glycerol and ethanol. Additionally, ary substances,
such as wetting or fying agents or pH buffering substances, may be present in such
compositions. Such carriers enable the pharmaceutical compositions to be ated as
tablets, pills, dragees, capsules, liquids, gels, syrups, slurries and suspensions, for ingestion by
the patient.
Suitable forms for administration include forms suitable for eral stration,
e.g. by injection or on, for example by bolus ion or continuous infusion. Where the
product is for injection or infusion, it may take the form of a suspension, solution or emulsion
in an oily or aqueous vehicle and it may contain formulatory agents, such as suspending,
preservative, stabilising and/or sing agents. Alternatively, the antibody molecule may be
in dry form, for reconstitution before use with an appropriate sterile liquid.
Once formulated, the compositions of the invention can be administered directly to the
subject. The subjects to be treated can be animals. However, in one or more ments the
compositions are adapted for administration to human subjects.
Suitably in formulations according to the present disclosure, the pH of the final
formulation is not similar to the value of the isoelectric point of the antibody or fragment, for
e if the pH ofthe formulation is 7 then a pI of from 8-9 or above may be appropriate.
Whilst not wishing to be bound by theory it is thought that this may ultimately provide a final
formulation with improved stability, for example the antibody or fragment remains in solution.
In one embodiment the composition or formulation of the present disclosure comprises
l-200mg/mL of antibodies, that this to say the combined antibody content, for example
lSOmg/mL or less, such as lOOmg/mL or less, in particular 90, 80, 70 , 60, 50, 40, 30, 20,
lOmg/mL or less.
In one embodiment a composition or ation according to the present disclosure
ses 20mg/mL of each antibody therein.
In one embodiment there is provided a formulation comprising:
33mg/mL or less of one ch antibody comprising a heavy variable region with a
sequence as shown in SEQ ID NO: 49 and a light variable region with a sequence
shown in SEQ ID NO: 47, and
28mg/mL or less of a first ch with a heavy variable region shown in SEQ ID
NO: 129 and a light variable region shown in SEQ ID NO: 127, and
25mg/mL of a second anti-Tch with a heavy variable region shown in SEQ ID NO:
159 and light variable region shown in SEQ ID NO: 157.
In one embodiment the pharmaceutical formulation at a pH in the range of 4.0 to 7.0
comprises: 1 to 200mg/mL of an antibody according to the present disclosure, 1 to lOOmM of a
buffer, 0.001 to 1% of a surfactant,
a) 10 to SOOmM of a stabiliser,
b) 5 to 500 mM of a tonicity agent or
c) 10 to SOOmM of a stabiliser and 5 to 500 mM of a tonicity agent.
In one embodiment the composition or formulation according to the present disclosure
comprises the buffer ate ed saline.
For example the formulation at approximately pH6 may comprise l to 50mg/mL of
antibody, 20mM L—histidine HCl, 240 mM trehalose and 0.02% polysorbate 20. Alternatively
a formulation at approximately pH 5.5 may comprise l to 50mg/mL of antibody, 20mM citrate
buffer, 240mM e, 20mM arginine, and 0.02% polysorbate 20.
The pharmaceutical itions of this invention may be administered by any number
es including, but not limited to, oral, intravenous, intramuscular, intra-arterial,
intramedullary, intrathecal, entricular, transdermal, transcutaneous (for example, see
WO98/20734), subcutaneous, intraperitoneal, intranasal, enteral, l, sublingual,
intravaginal or rectal routes, Hyposprays may also be used to administer the pharmaceutical
compositions of the invention. Typically, the eutic compositions may be prepared as
injectables, either as liquid ons or suspensions. Solid forms suitable for solution in, or
suspension in, liquid vehicles prior to injection may also be prepared.
Direct delivery of the compositions will generally be accomplished by injection,
subcutaneously, intraperitoneally, intravenously or intramuscularly, or delivered to the
interstitial space of a tissue.
The compositions can also be administered into a lesion or ly into the
gastrointestinal tract by for examples, encapsulated oral dosage for swallowing, through a
nasogastric tube to the h or ileum, through a rectal tube or enema solutions or by rectal
capsule. Dosage treatment may be a single dose schedule or a le dose schedule.
It will be appreciated that the active ingredient in the composition will be an antibody
molecule. As such, it will be tible to degradation in the gastrointestinal tract. Thus, if
the composition is to be administered by a route using the gastrointestinal tract, the
composition will need to contain agents which protect the antibody from degradation but which
e the antibody once it has been absorbed from the intestinal tract.
A thorough discussion ofpharmaceutically acceptable carriers is available in
Remington's Pharmaceutical Sciences (Mack hing Company, NJ. 1991).
The present invention also provides an antibody or antibody combination or a
composition comprising the same, as described herein, for treatment, for example for the
treatment or prophylaxis of C. difficile infection or complications associated with the same
such as diarrhoea, colitis in particular membranous colitis, bloating, abdominal pain and
toxic megacolon.
laxis can also be achieved by the administration ofpre-formed complexes of
inactivated toxin antigen (toxoid) and antibody in order to create a vaccine.
In one embodiment the antibodies, combinations thereof and itions comprising
the same according to the invention are suitable for treating infection with so-called super
strains of C. difiicz’le, i.e. hypervirulent strains such as ribotype 027.
The antibodies and compositions according to the present invention are suitable for use
in the ent or prophylaxis of acute and/or chronic effects of the relevant C. difi‘icile toxins
during primary infection.
The antibodies and compositions according to the present invention are suitable for use
in the treatment or prophylaxis of effects ofthe relevant C. dficile toxins during ary
infection or re-infection. International guidelines ne time intervals after a primary
infection which hence defines a secondary (or ent) ion as being distinct from a
continuation of existing symptoms sometimes described as a relapse (29). Research has shown
that secondary infections can be the result of the same strain or pe as the primary
infection. In such cases recurrence rather than relapse relies on agreed temporal constraints.
However, research also clearly shows that ary ion can also be the result of
infection of a strain or ribotype distinct from that of the primary infection. In one study, 48% of
disease recurrences were the result of a second strain distinct from that having caused the first
ion (30). In another study, more than 56% of disease recurrences were the result of a
second strain distinct from that having caused the first infection (31).
In one embodiment the antibodies, combinations f and compositions comprising
the same according to the invention are le for use in the prevention of damage, for
example long term structural damage to the epithelium ofthe colon.
In one embodiment the antibodies, combinations and composition are suitable for
preventing C. dz'fi‘icile infection ing recurrence of infection, in particular nosocomial
infection.
In one embodiment the antibodies, combinations f and compositions comprising
the same according to the invention are suitable for reducing the risk ofrecurrence of C.
diflicz'le infection.
Advantageously, the antibodies of the present disclosure can be administered
prophylactically to prevent ion or re-infection because in the absence of toxin to which
the antibody is c the antibody is simply to be cleared from the body without causing
adverse ctions with the subjects body tissues.
Advantageously the antibodies ofthe present disclosure seem to elicit a rapid response
after administration, for example within one or two days of administration rapid clearance of
the target toxin is invoked, this may prevent vital organs such as the lungs, heart and kidneys
being damaged. This is the first time that agents have been made available with can be
employed to t damage or injury to a patient by toxins A and/or B in the acute C. dz'flz‘cz'le
infection stage.
Thus in one embodiment the antibodies, ations thereof and compositions
comprising the same ing to the invention are suitable for ting damage to vital
organs.
In one embodiment the antibody, combinations or formulations described herein are
suitable for preventing death of an infected patient, if administered within an appropriate time
frame before irreparable damage has been done by the toxins.
The antibodies ofthe present disclosure have fast on-rates, which facilitates the rapid
efi’ect in vivo.
In one embodiment the patient population is over 60, such as over 65 years of age.
In one embodiment the patient population is 5 years old or less.
PCT/G32012/052222
The antibodies according the invention may be employed in combination with
otic treatment for e metronidazo 1e, vancomycin or fidaxomicin.
A range of in. vitro data exemplify the properties of the Mabs and Mab mixtures. We show that
one mixture of 3 Mabs (50% molar ties of anti-Tch and 50% molar quantities of anti-
Tch components) was able to protect hamsters from a lethal CDI.
In one ment there is provided a method of treating a t in need thereof by
administering a therapeutically effective amount of an antibody as described herein or antibody
combination or a composition comprising the same, for example in the treatment or
prophylaxis of C. dz‘fiicz'le infection or complications associated with the same such as
diarrhoea, s in particular pseudomembranous colitis, bloating, abdominal pain and toxic
megacolon.
In one embodiment the antibody, combination or formulation is administered by a
parenteral route, for example subcutaneously, intraperitoneally, intravenously or
uscularly. The data in the Examples generated in hamsters indicates that the doses
administered by this route reach the gut and thus are able to generate a therapeutic .
In one embodiment the antibody, combination or formulation is stered orally, for
example an enterically coated formulation.
In one embodiment there is provided use of an dy, combination or formulation as
described herein for the manufacture of a medicament for the treatment or prophylaxis of C.
dz'fifzcile infection.
In one embodiment the dose administered is in the range 1 to lOOOmg/Kg, for example
to 75mg/Kg, such 20 to 50mg/Kg.
In one embodiment the half—life of the antibody or antibodies in mice and hamsters in
vivo is in the range 6 to 8 days in healthy (uninfected) animals and hence are expected to have
half—lives in humans in the range of 14-28 days.
In one ment the antibody or antibodies are given as one dose only.
In one embodiment the antibody or antibodies are given as a weekly or biweekly dose.
In one embodiment the antibody or antibodies are given as once daily doses.
In one embodiment there is provided complex sing Tch or an immunogenic
fragment thereof, complexed with one or more anti-Tch dies defined herein. The
complex may be employed as the antigen in a vaccine formulation, for example suitable for
generating protective antibodies to toxin A in vivo after administration to a human.
In one embodiment there is ed complex comprising Tch or an immunogenic
fragment thereof, complexed with one or more anti-Tch dies defined herein. The
WO 38156
complex may be ed as the antigen in a vaccine formulation, for example suitable for
generating protective antibodies to toxin B in Vivo after administration to a human.
pe immunostimulants which may be formulated to produce adjuvants le for
use in the t ion include and are not restricted to the following.
In one embodiment there is ed a complex comprising Tch or an immunogenic
fragment thereof and Tch or an immunogenic fragment thereof, wherein each toxin or
fragment is complexed with one or more antibodies specific thereto, wherein the complex is
suitable for administration as a vaccine formulation.
Antibodyzantigen complexes are known to be taken up by the immune system in an Fc
receptor mediated s (27, 28) and pre-formed complexes of antibodyzantigen complexes
have been successfully use as es in human clinical trials (22).
In one or more embodiments the vaccine formulation further comprises an adjuvant as
an immunostimulant.
Monophosphoryl lipid A, in particular 3—de-O—acylated monophosphoryl lipid A (3D-
MPL), is a preferred Thl-type immunostimulant for use in the invention. 3D-MPL is a well
known adjuvant manufactured by Ribi Immunochem, Montana. Chemically it is often ed
as a mixture of 3-de-O-acylated monophosphoryl lipid A with either 4, 5, or 6 acylated chains.
It can be purified and prepared by the methods taught in GB 2122204B, which reference also
discloses the preparation of diphosphoryl lipid A, and 3-O-deacylated variants thereof. Other
purified and synthetic lipopolysaccharides have been described (US 6,005,099 and EP 0 729
473 Bl; Hilgers er a1., 1986, IntArchAZlergylmmunol., 79(4):392—6; Hilgers et al., 1987,
Immunology, 60(1): 141-6; and EP 0 549 074 B l). A preferred form of3D-MPL is in the form
of a particulate formulation having a small particle size less than 0.2mm in diameter, and its
method ofmanufacture is disclosed in EP 0 689 454.
Saponins are also preferred Th1 immunostirnulants in accordance with the invention.
Saponins are well known adjuvants and are taught in: Lacaille-Dubois, M and Wagner H.
(1996. A review of the biological and pharmacological activities of saponins. Phytomedicine
vol 2 pp 363 —386). For example, Quil A (derived from the bark ofthe South American tree
Quillaja Saponaria Molina), and fractions thereof, are described in US 540 and
ins as e adjuvants”, Kensil, C. R., Crit Rev Ther Drug Carrier Syst, 1996, 12 (l-
2):1—55; and EP 0 362 279 B1. The haemolytic saponins QS21 and Q8 17 (HPLC purified
fractions of Quil A) have been described as potent systemic nts, and the method of their
production is disclosed in US Patent No. 5,057,540 and EP 0 362 279 B 1. Also bed in
these references is the use of QS7 (a non-haemolytic fraction of Quil-A) which acts as a potent
adjuvant for systemic vaccines. Use of QS21 is further described in Kensil er al. (1991. J.
WO 38156
Immunology vol 146, 431—437). Combinations of QS21 and polysorbate or cyclodextrin are
also known (W0 99/ 10008). Particulate adjuvant systems comprising ons of QuilA, such
as QS21 and QS7 are described in W0 96/33739 and W0 96/ l 171 1. One such system is
known as an Iscorn and may contain one or more saponins.
Another preferred immunostirnulant is an immunostimulatory oligonucleotide
ning unmethylated CpG dinucleotides (“CpG”). CpG is an abbreviation for cytosine-
guanosine dinucleotide motifs present in DNA. CpG is known in the art as being an adjuvant
when administered by both systemic and mucosal routes (WO 96/02555, EP 468520, Davis et
al., Jlmmunol, 1998, l60(2):870~876; McCluskie and Davis, J.Immunol., 1998, 16 l(9):4463-
6). Historically, it was observed that the DNA fraction of BCG could exert an anti-tumour
effect. In further studies, synthetic oligonucleotides derived from BCG gene sequences were
shown to be capable of ng stimulatory effects (both in vitro and in vivo). The
authors of these studies concluded that certain palindromic sequences, including a l CG
motif, carried this activity. The central role of the CG motif in immunostimulation was later
elucidated in a ation by Krieg, Nature 374, p546 1995. Detailed analysis has shown that
the CG motif has to be in a certain sequence context, and that such sequences are common in
bacterial DNA but are rare in vertebrate DNA. The stimulatory sequence is ofien:
Purine, Purine, C, G, pyrimidine, pyrimidine; wherein the CG motif is not methylated, but
other unmethylated CpG sequences are known to be immunostimulatory and may be used in
the t invention.
In certain combinations ofthe six tides a palindromic sequence is present.
Several of these motifs, either as s of one motif or a combination of different motifs, can
be present in the same oligonucleotide. The presence of one or more ofthese
immunostimulatory sequences containing oligonucleotides can te various immune
subsets, including natural killer cells (which produce interferon g and have cytolytic activity)
and macrophages (Wooldrige et al Vol 89 (no. 8), 1977). Other unmethylated CpG containing
sequences not having this consensus sequence have also now been shown to be
immunomodulatory.
CpG when formulated into vaccines, is generally administered in free solution er
with free antigen (W0 96/02555; McCluskie and Davis, supra) or covalently conjugated to an
antigen (W0 98/ 16247), or formulated with a carrier such as aluminium ide titis
surface antigen) Davis et al. supra ; Brazolot—Millan er al., Proc.Natl.Acad.Sci., USA, 1998,
95(26), 15553-8).
Such immunostimulants as described above may be formulated together with carriers,
such as for e liposomes, oil in water emulsions, and or metallic salts, including
aluminium salts (such as aluminium hydroxide). For example, 3D-MPL may be formulated
with aluminium hydroxide (EP 0 689 454) or oil in water emulsions (W0 95/ 172 10); QSZl
may be advantageously formulated with cholesterol containing liposomes (WO 96/33739), oil
in water emulsions (WO 95/17210) or alum (W0 98/ 15287); CpG may be formulated with
alum (Davis et (2/. supra ; Brazolot-Millan supra) or with other cationic carriers.
Combinations of immunostimulants are also preferred, in particular a combination of a
monophosphoryl lipid A and a saponin derivative (W0 53; WO 95/17210; WO
96/33739; WO 98/56414; WO 99/12565; WO 99/11241), more particularly the combination of
0821 and 3D—MPL as disclosed in WO 94/00153. Alternatively, a combination of CpG plus a
saponin such as QSZl also forms a potent nt for use in the present invention.
Alternatively the n may be formulated in a liposome or in an Iscorn and combined with
an immunostimulatory oligonucleotide.
Thus, suitable adjuvant systems include, for example, a combination of
monophosphoryl lipid A, ably , er with an aluminium salt.
Thus is one ment the adjuvant is a combination ofQS21 and 3D—MPL in an oil
in water or liposomal formulation.
An enhanced system involves the ation of a monophosphoryl lipid A and a
saponin derivative particularly the combination of QSZl and 3D-MPL as sed in WO
94/00153, or a less reactogenic composition where the QS21 is quenched in cholesterol
containing liposomes (DQ) as disclosed in W0 96/33739. This combination may additionally
comprise an immunostimulatory oligonucleotide.
A particularly potent adjuvant formulation involving Q82 1, 3D-MPL & tocopherol in
an oil in water emulsion is described in WO 95/17210 and is r preferred formulation for
use in the invention.
r preferred formulation ses a CpG oligonucleotide alone or together with
an aluminium salt.
In a further aspect of the present invention there is ed a method of manufacture
of a vaccine formulation as herein described, wherein the method comprises admixing a
polypeptide according to the invention with a suitable adjuvant.
Particularly suitable adjuvant combinations for use in the formulations according to the
invention are as follows:
i) 3D-MPL + QS21 in a liposome
ii) Alum + 3D-MPL
iii) Alum + QS21 in a liposome + 3D-MPL
iv) Alum + CpG
PCT/G32012/052222
V) 3D-MPL + Q82] + oil in water emulsion
Vi) CpG
As used herein, the term “comprising” in context of the present specification should be
reted as “including”.
Embodiments and preferences may be combined as technically appropriate.
The disclosure herein describes embodiments comprising certain integers. The
disclosure also extends to the same embodiments consisting or consisting ially of said
integers.
FIGURES
Fig 1-10 shows various antibody and fragment sequences
Fig 11 shows sera titres for Tch and Tch
Fig 12 shows anti Tch (Ribotype 003) in-Vitro neutralization data for single Mabs
Fig 13 shows anti Tch ype 003) in-vitro neutralization data for single and
paired Mabs
Fig 14-15 shows anti Tch (Ribotype 003) ro neutralization data for paired Mabs
Fig 16-18 shows anti Tch (Ribotype 003) in-vitro neutralization data for three Mab
mixtures
Fig 19-20 shows anti Tch (Ribotype 003) in-vitro neutralization data for four and five
Mab mixtures
Fig 21-22 shows anti Tch (Ribotype 003) in-Vitro neutralization data for single and
paired Mabs at different Tch concentrations
Fig 23-24 shows anti Tch (Ribotype 003) in-vitro neutralization data for single and to
five Mab ess at different Tch concentrations
Fig 25-26 shows anti Tch (Ribotype 003) in-Vitro lization data for single Mabs
Fig 27-30 shows anti Tch (Ribotype 003) in—Vitro neutralization data for paired Mabs
Fig 31-33 shows anti Tch (Ribotype 003) in—Vitro lization data for three Mab
mixtures
Fig 34-40 shows anti Tch (Ribotype 003) in-Vitro neutralization data for two Mab
mixtures at different toxin concentrations
Fig 41-45 shows anti Tch (Ribotype 003) in—vitro neutralization data for two Mab
es at different ve Mab ratios and different toxin concentrations
Fig 46-59 shows Tch neutralisation data for single antibodies and pairs of antibodies
Fig 60 shows the amino acid sequence for Tch
Fig 61 shows the amino acid sequence for Tch
Fig 62 shows TEER assay data for Tch in a histogram format
Fig 62A shows TEER assay data for Tch in line graph format
Fig 63 shows a meier-kaplan curve for the combination of antibodies 997, 1125 and
1151, high concentration is 50mg/Kg and low concentration is 5mg/Kg
50mg/kg’ dose gave 100% protection to day 11, ~82% protection to day 28.
5mg/kg’ dose resulted in non—durable and incomplete protection.
Fig 64 shows bodyweight changes for vancomycin and vehicle treated hamsters
Fig 65 shows the bodyweight for low dose dies 5mg/Kg and high dose antibodies
50mg/Kg
Fig 66 shows photographs of a colon where the animal received treatment with
antibodies ing to the present disclosure vs a l
Fig 67-68 show s ofvortexing on antibody stability
Fig 69 shows a comparison of aggregation stability for various antibodies
Fig 70-73 show neutralisation ofTch for various ribotypes
Antibody Generation
A range of different immunogens and screening reagents were either purchased or produced by
conventional E. 0012' expression techniques in order to provide a e and broad immune
response and to tate identification and characterisation of monoclonal antibodies (listed in
Table 1). In cases where recombinant proteins or peptides were ted, sequences were
based on ribotype 027. The sequence for Tch from ribotype 027 is given in SEQ ID NO: 171
(Uniprot accession number C9YJ37) and the sequence for Tch from ribotype 027 is given is
SEQ ID NO: 172 ot accession number C9YJ35).
Sprague Dawley rats and half-lop rabbits were immunised with either synthetic peptides
mapping to regions common to both Tch and Tdch full-length toxin, formaldehyde—
inactivated toxoid A, binding domain fragments of Toxin A (CROPS l ,2,3 or CROPS4,5,6) or
binding domain fragment ofToxin B (CROPS 1 ,2,3,4), or in some cases, a combination of the
above. Following 2 to 6 immunisations, animals were sacrificed and PBMC, spleen and bone
marrow ted. Sera were monitored for binding to Toxin A domains, toxin B domains,
toxin or toxoid by ELISA. Sera titres of 2 such immunisations are shown in figure 11.
UCB SLAM was used as a means to generate monoclonal antibodies. B cells were ed
directly fiom immunised animals (Zubler et al., 1985). This step enabled sampling of a large
percentage ofthe B cell repertoire. By incorporating the ed lymphocyte antibody method
(SLAM) (Babcook et al., 1996) it was possible to deconvolute positive culture wells and
W0 2013l038156
identify antigen-specific antibody-secreting cells. Here we used a modified version of SLAM
(UCB SLAM (Tickle et al. 2009)) that utilises a fluorescence—based method to identify n—
specific B cells from culture wells. B cell cultures were set up and atants were first
screened for their ability to bind a relevant purified toxin domain (binding, ocation or
catalytic) in a bead-based assay using an Applied Biosystem 8200 cellular detection system.
This was a homogeneous assay using B cell culture supernatant containing IgG, biotinylated
toxin domains coated onto streptavidin beads and a goat anti-rat/rabbit Fc—Cy5 conjugate. Cell
cultures ve for g to Tch or Tch components from this assay were selected for
use in cell-based functional assays to identify neutralisers oftoxin-induced cytotoxicity.
l0 Approximately 12,000 toxin-specific positives were identified in the primary binding screen
from a total of40 x ISO-plate experiments. This equated to the screening of approximately 0.5
billion B cells. Heavy and light variable region gene pairs were isolated from single cells
harvested by micromanipulation from approximately 100 toxin—neutralising wells following
e transcription (RT)—PCR. These V—region genes were then cloned as mouse IgG l/kappa
full-length antibodies for rat variable regions and rabbit IgG/kappa fiill-length antibodies for
rabbit variable regions. dies were re—expressed in a HEK—293 transient expression
system. These recombinant antibodies were then retested for their ability to neutralise toxin in
cell based assays. Recombinant antibodies were also screened by BIAcore to determine affinity
for a given toxin domain and to also determine the specificity and approximate the number of
binding events of antibody to toxin. Based on in vitro activity in cell based assays and y
measurements, lead candidates were selected for humanisation. Unless otherwise stated, all the
data herein was generated using the humanised antibodies.
A panel mbinant, E. coli-produced toxin fiagments (Tch), C. icz’le—derived toxin or
toxoid (A) and synthetic peptides (B) were generated or purchased fi'om commercial sources.
Table 1. Toxin A (Tch) ce related ts for screening and immunizations.
e number
MI-E659
K577431350
5182702249
62205-R2608
81827-N1978
GI966—N2133
62100-132249
G22l3-N238l UCB E. coli expression
2012/052222
Table 2. Toxin B (Tch) sequence related reagents for screening and immunizations.
Toxin Domain Amino acid Se uence
Translocafion
Expression and purification of C. difficile anti-toxin Mabs
Separate light chain and heavy chain mammalian expression plasmids were combined in
equimolar ratios and used to transfect 3 or CHO~S cells. For small scale expression
studies lipofectamine and EEK-293 cells were used whereas for tion oflarger batches of
lgG electroporation into CHO-S was preferred.
Culture supematants were loaded onto a MabSelect SuRe column (in PBS pH 7.4). dy
was eluted with 100% 0.1M Sodium e pH 3 .4 buffer. Samples were neutralized to pH7.4
with Tris.C1pH8.0. Aggregate was removed by Superdex 200 Gel Filtration column in PBS
pH 7.4.
TABLE 3
Cell Volume of sion Amount
Ant'b d1 o y
_n e SN (L)
. 3e "I urified (m_)
Example 1 In-vitro neutralization of Tch activity by ed Mabs
All neutralisation screening assays were run in 96 well polystyrene plates. The assay uses
CACO~2 cells grown, and screened in MEM + 20% FCS, 2mM Q, and NEAA. Any antibody
combinations are at equal molar ratios unless stated otherwise. Day 1: Cells were plated @
3000 per well in 50 ul media, and incubated for 24 hrs; Day 2: d samples of humanised
Mab were added to 96 well round bottomed polypropylene sterile plates; Spike PP plates with
toxin A at a concentration ent to generated the appropriate lethal dose i.e. LDso or above
and incubate for 1 hr, at 370C; Add 50 ul of this mixture to cell plates and incubate for 96 hrs;
Day 5: Add Methylene blue (0.5% Methylene Blue 50% ethanol); Incubate for 1 hr at room
temperature; Lyse the cells with 1% N-Lauryl Sarcosine, and Read on the BIOTEK Synergy2
plate reader at 405nm. The results are shown in Fig 12 to 24. ECso and % maximum
neutralization ofTch activity shown confirm that the selected antibodies have very high
potencies as single agents. Combinations of 2 to 5 ofthese did not improve upon the best ECso
or % maximum neutralization. Lack of any synergy when combining Mabs CA922, 923, 995,
997 and 1000 is an ant observation and may be due to the fact the each antibody alone
has exceptionally high levels of affinity and potency. Supporting data in Example 5 also show
that some ofthe Mabs (e.g. CA997) are capable of binding to Tch subdomains many times.
Hence it seems probable that these 5 Mabs represent that the maximum affinity, y and
valency that is achievable when targeting the C-terminal cell binding domain ofTch. The
antibodies were also effective at neutralising very high toxin concentrations g from
LDSO to greater than LD95 (LDmx) but some modest increases in ECso (i.e. decreases in
potency) were observed with very high levels of [Tch]. These data are also surprising since
others have shown substantial reductions in potency when testing elevated Tch
concentrations (20).
The high potency and affinity ofthe Mabs described here, e.g. for CA997; is not due solely to
their high valency of binding. Others (20 and WOO6/071877) describe ch Mabs
capable ofbinding up to 14 times. These Mabs only had affinities in the range 0.3 to lOOnM
and showed incomplete protection against Tch mediated cell killing, alone (26-63%
protection) or in pairs (31-73% protection). Hence it has been strated that high valency
of g to Tch does not necessarily invoke either high affinity of binding to or
neutralisation ofTch. Neither the affinities nor valency ofbinding to Tch were described
for Mab CDA—l (18 and 559). Thus Mabs described herein to have surprising affinity,
y and valency.
TABLE 4 Anti Tch 1, 2 & 3 Mab combinations at a single Tch cone. (LDso)
Antibodx Final (highest) Mab conc.ng/ml EC50(ng/ml)
922 500 1.21
923 500 160.42
995 500 37.64
997 500 6.25
1000 500 19.73
922+923 500 3.58
922+925 500 3.326
922+997 500 2.88
922+1000 500 2.64
923+995 500 60.23
7 500 7.54
923+1000 500 9.24
995+997 500 7.29
995+1000 500 19.63
997+1000 500 4.46
922+923+995 500 4.72
922+923+997 500 3.23
922+923+1000 500 3.21
+997 500 2.22
922+995+1000 500 2.85
922+997+1000 500 2.22
923+995+997 500 5.04
- 923+995+1000 500 9.49
995+997+1000 500 5.84
922+923+995+997 500 2.75
922+923+995+1000 500 3.75
922+995+997+1000 500 3.46
923+995+997+1000 500 4.81
3+997+1000 500 3.06
922+923+995+997+1000 500 4.72
TABLE 5 Anti Tch single, paired, and triplet Mab combinations at various Tch
concentrations, where Tch is at its LDso, LDgo, LD95 and LDmax.
Toxin Tch Sample Final Mab
conc.n_lml
@ 3000 pg/ml (LDMAX) 922 500
1000 500
922+997 500
00 500 m
997+1000 500
922+997+1000 500
922+997+1000+995
922+997+1000+995+923
@ 1000 pg/ml (LD95)
97—_M-
922+997
997+1000
922+997+1000
922+997+1000+995
922+997+1000+995+923
@ 700 pg/ml (LDgo) —
922+997
922+1000
997+1000
922+997+1000
922+997+1000+995+923
’ 350 p° m1(LDgo)
922+997
922+1000
997+1000
922+997+1000
7+1000+995
922+997+1000+995+923 500
Example 2 Anti Tch in-vitro neutralization by purified Mab.
Assay methods description:
All neutralisation screening assays were run in 96 well polystyrene .
The assay uses CACO-2 cells grown, and screened in MEM + 20% FCS, 2mM Q, and
NEAA.Un1ess stated all Ab combinations are in equal ratios.
0 Day 1: Cells are plated @ 3000 per well in 50 n1 media, and incubated for 24 hrs
0 Day 2: Purified samples nised Mab were added to 96 well round bottomed
opylene sterile plates
0 Spike PP plates with toxin B lot # 031 and incubate for 1 hr, at 370C
0 Add 50 ul ofthis e to cell plates
0 Incubate for 96 hrs
0 Day 5: Add Methylene blue (0.5%Methylene Blue 50% ethanol)
0 Incubate for 1 hr at room temperature
0 Lyse the cells with 1% N—Lauryl Sarcosine
o Read on the BIOTEK Synergy2 plate reader at 405nm
The data in Figures 25 to 33 show that single Mabs alone were relatively ineffective at neutralizing
Tch, both in terms of% maximum neutralization and activity (ECso). However, when the
antibodies were combined in two’s and three’s considerable improvements in both % maximum
neutralization and activity (ECso) were observed. 1125 and 1151 were selected as a best g,
although other good pairings were ed: 1 125+1 153, 1 125+1 134.
The most effective pairs of Mabs were ed cally and were found retrospectively to
make unexpected and surprising combinations when regarding the individual potencies of each
Mab. For example, in Table 6 only CA927 had a Tch neutralisation potential which could result
in a d EC50 whilst the Tch neutralisation potential of both CA1125 and CA1151 were
insufficient under these assay conditions to result in a defined ECso. However, CA927 was not
found to be the most effective Mab to use within a combination. The best CA927 containing
combination had an ECSO of 13.5ng/ml whereas other two Mab combinations had ECso’s as low as
2.59 and 4.71ng/ml. In another example, in Table 8 CA1099 had the lowest Tch neutralisation
EC50 under the assay conditions used. r, CA1099 was not found to be the most effective
Mab to use within a combination. The best CA1099 containing combination had an EC50 of 6ng/rnl
whereas other two Mab combinations had EC50’s as low as 2 and lng/ml. We might speculate that
the most effective pairings of Mabs are defined by their cooperative binding modalities especially
as defined by having non—overlapping epitopes.
TABLE 6 Anti-Tch Mab combinations and relative Mab ratios at constant toxin concentration.
Sample Final Mab ECso(ng/ml)
c0nc.n0/ml
1125.g2 1000 >1000
1134.g5 1000 >1000
927. _2 1000 12.89
1]53.g8 1000 >1000
1102.4 1000 >1000
927+1099 1000 >1000
927+] 102 1000 >1000
927+1114 1000 >1]1.]11
927+] 125 1000 13.55
927+1134 1000 51.58
1099+]114 1000 >1000
1102+] 114 1000 >333.333
1102+] 125 1000 15.51
1114+]134 1000 19.70
1114+1151 1000 25.69
1114+] 153 1000 27.48
1125+1134 1000 2.59
151 1000 4.71
1 125+] 153 1000 21.23
1125+1134+1114 1000 3.77
1125+1134+927 1000 2.63
]5]+]114 1000 4.90
1125+]]51+927 1000 5.69
1125.__2+]134.5+927._2 1000 5.83
1125.g2+1134.__5+]153.8 1000
1125.-2+1134.5+1102._4 1000 272
e 3 Neutralisation of Tch by combinations of purified Mab.
All neutralisation screening assays were run in 96 well polystyrene plates.
The assay uses CACO-2 cells grown, and screened in MEM + 20% FCS, 2mM Q, and NEAA.
0 Day 1: Cells are plated @ 3000 per well in 50 ul media, and incubated for 24 hrs
0 Day 2: Purified samples ofhumanised Mab were added to 96 well round bottomed
polypropylene sterile plates
0 Spike PP plates with toxin B (VPI 10463) and incubate for 1 hr, at 370C
0 Add 50 ul ofthis e to cell plates
0 Incubate for 72 hrs
0 Day 5: Add Methylene blue (0.5%Methylene Blue 50% ETOH)
0 te for 1 hr at room temperature
0 Lyse the cells with 1% N—Lauryl Sarcosine
o Read on the BIOTEK Synergy2 plate reader at 405nm
The s are shown in Figures 34 to 45.
These data show that the best pair of Mabs for neutralizing Tch at a range of toxin concentrations
was CA1 125 and CA1151. Moreover, the 1125+1151 combination was largely unaffected by
changes in the relative molar ratios which is in contrast to 1125+1153.
TABLE 7 Anti-Tch Mab combinations and relative Mab ratios at 3 different toxin
COHCS.
_-_-_
1125.2+1134.5 25:75
.2+1151_4 25:75
1125,..2+1153.8 25:75
.2+1134.5 75:25W“
1125.92 + 1153.98 (75:25)
The data show that even the most active specific paired combinations have surprisingly and non-
predictably different properties relative to each other. The ECso of the preferred combination of
CA1125 and CA1151 in equimolar ratios is largely unaffected by an increasing [Tch]. The three
relative molar ratios of Mabs tested (i.e. 25:75 vs 50:50 vs 75:25) have very similar ECso’s to each
other, suggesting that CA1125 and CA1151 have especially complementary modes of . This
is in contrast to the combination of CA1 125 with CA1134 Where the increase in ECSO (i.e.
reduction ofpotency) with higher [Tch] is more substantial and Where the three Mab molar ratios
are not equally effective: The CA1125:CA1134 ratio of 25:75 is notably less potent than 50:50 and
75:25. This ts that the combined potency of CA1125+CA1134 is more ent upon the
CA1125 component. The ECSO of all three molar combinations of CA1125 and CA1153 is
substantially affected by increasing [Tch] suggesting that CA1153 is a less suitable partner for
combination with CA1125. In rota, these data show that CA1125 and CA1151 are a particularly
favourable combination since the highest potency is maintained across a range ofMab and Tch
molar ratios.
TABLE 8 Tch neutralisation — 1 or 2 ch Mabs at constant toxin dose (LDso).
Antibody IC5O (nglml)
1099
1102 N/A
1114 103
1125 N A\
1134
1151 182
1153 260
926 N/A
927 N/A
1099 + 112
1114 + 112
1151 + 112
1134 + 112
1102 + 112
1125 + 115
926 + 1125 42
927 + 1125 A
TABLE 9 Tch neutralisation — 1 or 2 anti—Tch Mabs at various Tch doses.
11514
112521111545 50:50
1125.2+1153.e 5050
112502 + 1151-0417525)
These data show that combination of Mabs, especially CA1125 and CA1151 improve both the
potency as measured by ECso but also as ed by % maximum protection. The % maximum
tion is of particular relevance in this assay method since the Maszch mixture is incubated
with cells for a long time (72h). Since Tch is toxic to Caco-2 cells in the range ofpg/ml in 2-4h
this measure may be considered to be a very difficult test of Mab neutralisation y and may
reflect the ability ofMab mixture with regard to their binding kinetics or modalities. In turn this
may reflect the ability ofMab mixtures to protect against the effects ofTch during an established
infection when there may be substantial quantities ofTch within tissues for many hours,
Selected data from Tables 6—9 are further illustrated in Figures 46—59.
Example 4 Valency of binding of Mabs to Tch sub-domains.
The number of moles of binding events of anti~C. difficz'le Tch dies to Tch1234 was
determined by Surface Plasmon Resonance (SPR) on a Biacore 3000 (GE Healthcare).
avidin was immobilized on a CM5 sensor chip (GE Healthcare) to a level 0RU via
amine coupling and biotinylated Tch1234 was bound at 0RU. Two 20ul injections of the
same anti-Tch antibody mixtures (final concentration of each antibody was 500nM) were injected
over this surface at 10ul/min and the saturating binding response recorded. The surface was
regenerated after every cycle using HCl. All the data was corrected for background g using
the response to the streptavidin only nce flowcell.
Table 10: Surface plasmon resonance is of the number of IgG binding sites on Tchlm
Antibody combination No. of binding Binding Binding relative to
cycle repeats Response (RU) CA927 average
res | 01188
CA1 125.g2
CA1151.g4
CA1125_CA1151
CA1 125_CA927
CA1151_CA927
CA927
All responses have been expressed relative to a multiple of CA927 average response (final column
table 10) since CA927 appears to be representative of a Mab which binds to Tch1234 once only.
Immobilized CA1125, when bound to Tch1234, does not allow CA1125 to bind further supporting
the idea that CA1 125 has one binding site on Tch1234 and that after this has been saturated that no
other binding site for CA1125 can be found. However, when Tch1234 has been ted by
CA1125, CA1151 can still bind. This demonstrates that CA1151 binds at alternative sites to that
occupied by CA1 125. Together these data show that CA1125 is a single binder ofTch1234
whereas 1151 IgG binds to Tchlm more than once, most likely twice. Hence a mixture of
CA1125 and CA1151 can bind to Tch1234 approximately 3 times.
All antibodies combinations have an additive binding response showing that there are 2 or more
non-competitive sites on Tch1234 bound by these ations.
Example 5 Valency of binding of Mabs to Tch sub-domains.
The number of moles of binding events of anti-Cdifiicile Tch antibodies to Tch123 and A455
were determined by Surface n Resonance (SPR) on a e 3000 (GE Healthcare).
Streptavidin was immobilized on a CMS sensor chip (GE care) Via amine ng to a level
of~4000RU and biotinylated Tchm was bound to one flowcell and Tch456 was bound to a
ent flowcell to a response of ~500RU. Two 30ul injections of the same anti-Tch antibody at
1 nM were injected over both flowcells at lord/min and the saturating binding response recorded.
The e was regenerated after every cycle using HCl. All the data was corrected for
background binding using the response to the streptavidin only reference flowcell.
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Antibodies CA997 and CA1000 bind to Tchm in a ratio of six CA997’S to one CA1000 s
they bind to Tch456 in a ratio ofthree CA997’s to one CAlOOO (Table 2).
The maximum antibody response for CA997, ted for molecular weight and immobilized
toxin level is similar for Tch123 and Tch456. This suggests that CA997 binds Tch456 six times
and CAIOOO binds twice to Tch455. Hence antibody CA997 likely binds to Tch whole toxin
(Tch) approximately 12 times.
Overall CA997 binds six times or more to A123 and six times or more to A456, Whereas CAlOOO
binds at least once to A123 and twice to A456.
Increased valency of binding to Tch and Tch may have two important effects in vivo. The first
is that any Mab or Mab mixture which is capable of binding Tch more than once will have
increased potential to form inter-toxin binding events and hence immunoprecipitation.
Immunoprecipitation can contribute to y by reducing the solubility of toxin and forming
very large macromolecular complexes which hence reduce the ive working concentration of
toxin. Such large protein complexes may be taken up by macrophages and monocytes resident in
the tissue and may contribute to an augmented ho st immune respone. Antigenzantibody complexes
bearing Fc nts have been specifically shown to be capable ofpriming a host immune
respone t a gut pathogen (21). Also, soluble antigen2antibody complexes have been
successfully used as a vaccine ed against the antigen in human clinical trials (22). In addition,
immune decoration of toxin with Fe bearing IgG may bute to immune clearance using
normal mechanisms through the liver and spleen. In general, higher levels of PC decoration of
n lead to faster and more complete levels of clearance (23) Critically, it may be that presence
of 2 or more Mab Fc domains per toxin, especially 3 Fc domains per toxin may represent a critical
number ofch required for very rapid and substantial clearance oftoxin (24). The anti-Tch Mab
CA997 is likely capable of binding to Tch up to 12 times and the combination of CA1 125 and
CA1151 is likely capable of binding to Tch 3 times. Hence the 3 Mab e is very likely to be
capable of providing for these kinds of additional potency mechanisms in vivo.
Example 6 Mab neutralisation of loss of TEER caused by Tch.
C. a’z'flicz‘le monolayer integrity assay is performed using the Becton—Dickinson (BD) Caco-2
BioCoat HTS plate .
Day 1 — Caco-2 cells seeded @ 2x105/ml per well of the plate insert in 500ul Basal seeding
medium (provided by BD). 35ml of Basal seeding medium added to the feeder tray. Cells
incubated for 24 hours at 37°C. Day 2 — Basal seeding medium removed from inserts and feeder
tray, and replaced with Entero-STIM differentiation medium (supplied by BD). 500ul added per
well insert and 35ml to the feeder tray. Cells incubate for a further 72hrs at 37°C. Day 5 —
dies prepared at 2x concentration ve to that to be used in the assay well in a
polypropylene plate and toxin A. Toxin A added to antibodies at a concentration of 125ng/m1 and
plate incubated for 1hr at 37°C. lml of Caco-2 growth medium (MEM + 20% FCS, 2mM Q,
NEAA) added to each well of a standard 24—well TC plate. BioCoat insert plate transferred to the
24~well TC plate. Entero—STIM medium removed from inserts and ed with 400pl of
toxin:Ab mixture.
Loss of tight junctions between gut cells is the key early effect ofTch on cell monolayers and gut
tissue sections and is the primary cause of diarrhoea. Albumin and other serum proteins are lost
into the gut lumen along with accompanying serum fluid. The loss of trans-epithelial electrical
ance in differentiated cultured cells which have formed a monolayer is a useful surrogate for
the protection against the acute effects of Tch. Three antibodies shown have good levels of
tion against TEER loss, Figure 62. It is notable and surprising that the abilities of these Mabs
in TEER assays do not reflect those seen in toxin neutralization as measured in a cell proliferation
assay. CA922 has the best performance in a cell proliferation assay (ECso = 1.21 ng/ml) and yet this
is considerably rformed in the TEER assay by an dy (CA1000) which has >le lower
potency in a cell proliferation assay (ECso = 19.73ng/ml). CA997 had the best performance in the
TEER assay since it had both high levels of protection and maintained this at the lower Mab concs.
CA997 had a substantial potential to neutralize TEER loss with maximal inhibition approaching
80% and an EC50 of approximately 80ng/ml at 4h. These ations are unexpected since the
Mabs in question all had high ies for Tch domains (CA922 ~4pM, CA997 ~132pM,
CA1000 ~73pM). These data suggest that CA997 and CA1000 recognise epitopes important in
TEER loss or neutralize Tch by different mechanism to other Mabs. Furthermore, since CA1000
is estimated to bind to holotoxin twice (once in Tch123 and once in Tch456) CA1000 may define
‘TEER al’ epitopes within the Tch cell binding regions which might have particular value
for defining vaccine immunogens. Results are shown in Figures 62.
Example 7 Affinity of anti—C. difficile toxin dies for mains of Tch and Tch:
, Tch456 and 4.
Kinetic constants for the interactions of anti-C. difficile Tch and Tch antibodies were
determined by surface plasmon resonance conducted on a BIAcore 3000 using CMS sensor chips.
All experiments were performed at 25°C. Affinipure F(ab’)2 fiagment goat anti—human IgG, Fc
nt specific (Jackson ImmunoResearch) was immobilised on a CMS Sensor Chip (GE) Via
amine coupling chemistry to a capture level of z7000 response units (RUs). HBS-EP buffer
(10mM HEPES pH 7.4, 0.15 M NaCl, 3 mM EDTA, 0.005 % Surfactant P20, e AB) was
used as the running buffer with a flow rate of 10 uL/min. A 10 uL injection of each antibody at
lug/ml or lower was used for capture by the immobilised anti-human IgG, Fc. Tch123, Tch456
or Tch1234 were titrated over captured purified antibodies at doubling dilutions from 12.5nM at
a flow rate of 30 uL/min. For antibodies present in e supernatants, a single concentration of
12.5nM ofTch123 or Tch456 and 50nM of Tch1234 was passed over the antibodies at
30ul/min. Kinetics were calculated on n=2 The surface was regenerated at a flowrate of lOuL/min
by two 10 uL ions of40 mM HCl, and a 5 uL injection of 5 mM NaOH.
Double referenced background subtracted binding curves were analysed using the BIAevaluation
software (version 3.2) following standard procedures. Kinetic parameters were determined from
the fitting thm.
TABLE 12 Anti-Tch Mab affinities and bindin kinetics
Antibod 1D kaonvls) kda/s) KD<M> KD(M)
CA164WOO922gl»»»»»» 1.09E+06 06 4.06E~l 2
CA164_00923.g1 5.36E+05 3.47E-05 6.47E-ll
Purified Mab 5 point
CA164_00995.g1
No binding titration
”SiéléfLQWRZ-gl,,,,,, 7.84E+05 1.03E—04 1.32E—10
CA164_01000gl_____ 1.33E+05 9.78E—06 7.33E-1 l
atant 2x lpoint
CA164_00993.g1
9.00E+05 5.00E—06 5.5 6E—12 titration
__Qél.§fi,99922:gl...... 1.29E+06 3.33E—06 2.59E-12
.QAI.6$QQ92§:.g,1., 6.16E+05 1.92E-04 3.12E-10 d Mab 5 point
.Qélfifllwfizgl,,,,, 2.87E+05 3.42E-05 1-1 913-10 titration
CA164_00997.g1 05 6.15E—05 6.68E-11
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CA164_01000.g1 3.55E+05 2.98E-05 8.41E—11
Supernatant 2x 1point
CA164_00993.g1
1.25E+06 5.00E—06 4.00E—12 . titration
TABLE 13 Anti-Tch Mab affinities and _ kinetics
Antibod ID kaa/Ms) kda/s) KD<M>
d Mab 3 point
CA164_1 125.g2 05 titration
Purified Mab 3 point
CA164 l 151. 7 .49E+05 titration
Supernatant 2x 1point
CA164_926.g1 1.3 8E+05 titration
Purified Mab 3 point
CA164_927.g2 3.97E+05 titration
Purified Mab 3 point
CA164_1099.g2 5.24E+05 ion
Supernatant 2x 1point
CA164_1102.g4 1.17E+05 titration
Supernatant 2x 1point
CA164_11 l4.g2 2.87E+05 titration
Supernatant 2x 1point
CA164_1114.g8 2.55E+05 titration
Supernatant 2x 1point
CA164_1129.g1 1.89E+05 titration
d Mab 3 point
CA1 64_1 1 34.g5 5 .09E+05 ion
TchlZ34 Purified Mab 3 point
CA164_1 1 53.g8 1 .43E+05 titration
The anti-Tch affinities are particularly high compared to the published affinities of other Mabs.
We demonstrate that affinities as low as 4pM are achievable. The preferred CA997 has an y
of l32pM, CA1125 122pM and CA115 551pM. CA995 clearly shows that it does not bind to
CROPS A123 and hence that demonstrates that the Mab shown here have properties which are
different from each other in surprising and unexpected ways. CA922, 923, 997 and 1000 do bind at
least once to CROPS A123 and A456. Hence these 4 Mabs confirming that each must bind to
holotoxin at least twice. We have been unable to derive ies for the binding of these Mabs to
holotoxin due to technical constraints. However, given the high affinities and valencies
demonstrated for the anti-Tch Mabs it is possible to speculate that the functional affinities against
ho lotoxin may be even er than those illustrated for binding to toxin sub-domains.
The anti-Tch Mabs also demonstrated strong ies reaching as low as 31pM. In ular
CA1125, 1151, 927, 1099, 1134 and 1153 show ies which surpass those demonstrated by
Example 8 Biophysical characteristion of C. difficile anti-toxin humanised IgGl Molecules.
Molecules analysed
Anti-Tch IgGl:
CA164_00922.g1
CA1 64_0923.g1
CA164_0995.g1
CA164_0997.g1
CA164_01000.g1
Anti-Tch IgGl
CA164_01125.gl
CA164_01125.g2
CA164_01134.g4
CA164_01134.g5
CA164_01134.g6
CA164_01102.g1
CA164_01102.g4
CA164_01151.g4
Antibody combinations need to be made up of Mabs having high levels of ity in order to
mitigate potential risks of aggregation during long term storage. Thermal stability (Tm) is used as
one measure. Of special value to Mab mixtures is measuring their propensity to aggregate due to
al stress such as agitation or shaking. Aggregates are undesirable components of drug
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itions since they may reduce storage life time and may pose a safety risk to patients at
certain levels. The Tm data show that all 5 anti-Tch Mabs have high Tm stability, whilst three
, 923 and 997) have very high Tm’s in the range of 79-81°C. Of the anti-Tch Mabs tested
all but two have very high Tm’s. Of note is that CA997, CA1125 and CA1151 which were tested
in the hamster infection study (Example 9) had very high Tm’s (79.2°C, 793°C and 80.80C
respectively) which makes them suitable for use in a Mab mixture.
In the shaking aggregation assay, CA997 and 922 had the lowest propensity to aggregate of the 5
anti—Tch Mabs. Similarly, CA115 and 1151 had the lowest aggregation propensities of the anti-
Tch Mabs. Hence the use of CA997, 1125 and 1151 as a Mab mixture may have special value
since they are more likely to survive co-formulation and storage at high n concentrations.
Estimation of isoelectric point (p1) by capillary IEF
Samples were prepared by mixing the ing: 30u1 Protein sample at l, 0.35%
cellulose, 4% pH3-10 ampholytes (Pharmalyte), synthetic pl markers (4.65 and 9.77), lul
of each stock solution, and HPLC grade water to make up the final volume to 200ul. The mixture
was then analysed using iCE2801EF analyzer(pre-focusing at 1500V for 1 min followed by
focusing at 3000V for 6mins). The calibrated electropherograms were then integrated using
Empower software (from Waters)
Thermal stability (Tm) measured via Thermofluor assay.
This method uses Sypro orange fluorescent dye to monitor the unfolding process of protein
domains. The dye binds to exposed hobic regions that become exposed as a consequence of
ing which s in a change to the emission spectrum.
The sample (5u1 at 1mg/ml) is mixed with a 5ul of a stock solution of Sypro orange (30x) and the
volume made up to 50ul with PBS,pH 7.40.
10u1 aliquots ofthis solution is applied towells in a 384 well plate (n=4).
The plate is placed in a 7900HT fast real-time PCR system containing a heating device for accurate
temperature control. The ature is increased from 20°C to 990 C (Ramp rate of 1.1°C/min).A
CCD device simultaneously monitors the fluorescence changes in the wells. An algorithm is used
to process intensity data and take into account multiple transitions.
Stressing of samples by agitation.
During manufacture antibody samples are ted to mechanical stress generated by processes
such as pumping and filtration. This may cause denaturation and consequently aggregation due to
exposure of the protein to air-liquid interfaces and shear forces resulting in the ultimate loss of
bioactivity. Stress by vortexing is a method to screen the robustness of the antibody samples for
prediction of ation stability.
Both anti-Tch and anti-Tch IgGl les were subjected to stress by agitation, by vortexing
using an Eppendorf Thermomixer Comfort at 25 °C, l400rpm. Sample size was 250uL, (X3 per
sample) in a 1.5 mL conical orf—style capped tube (plastic), in PBS pH 7.4. Each sample
was brought to a concentration of lmg/ml (using tion ient calculated from sequence)
and aggregation was monitored by absorbance at 340nm and/or 595nm, by use of a Varian Cary
SO-Bio spectrophotometer, measured at intervals for up to 24 hours.
Results Table 14 provides a summary ofthe measured pl and Tm data for both anti—Tch and
ch IgGl molecules.
Table 14 : Compilation of p1 and Tm Data
Anti-TCdA I_ G1
CA164 00922-1"—8 l
CA164 0923.—_79
CA1640995.1"—71
CA164 0997-1
—-_—
*denotes that it was not possible to discern the Fab and CH2 domains.
Measured pI
The measured pI of the molecules were high (except for CA164_01000.gl_P3) and away from the
pH of formulation buffers such as PBS, pH 7.4 and 50m sodium acetate/125mM sodium chloride,
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pH 5. This may mean that s with pH’s suitable for co-formulation oftwo or more Mabs can
be selected.
Thermal Stability (Tm) Measured via Thermofluor assay
Since all of the les are IgGl, the Tm of the Fc domain (Tm(CH2)) are the same. The
difference in thermal stability between the molecules can be determined by the Tm ofthe Fab’
domain (Tm(Fab)).
For the anti-Tch molecules, the rank order (most stable first) was CA9222997>923>995>1000
and for the anti-Tch les (most stable first) was
CA115l.g4>1125.g1,g4>1134.g4>1134.g521134.g6>1102.g1=1102.g4.
Stressing of samples by agitation
It was possible to determine ent aggregation stability between the different antibodies,
Figure 67 shows the effect of agitation via vortexing on different anti-Tch IgGl les in
PBS,pH 7.4.
It was possible to determine a ranking order (most aggregation stable first) :
CA9222997>9232995>1000
Figure 68 shows the effect of agitation via vortexing on different anti-Tch molecules.
It was possible to rank the order of aggregation stability, such that the CA1125 grafts appeared
more stable than the CA1134 molecules which were more stable than the CA1102
molecules.
A further study was performed to compare directly the aggregation ity ofthe ch
molecule (CA1151.g4) with the more stable le CA1 125.g2 (see Figure 2) and more
aggregation stable anti—Tch molecules (CA922.gl and CA997.gl). The results can be seen in
Figure 69.
Further results for these 4 Mabs are also shown in Figures 67 and 68.
For the anti-Tch molecules, CA922.g1 and g1, CA922 were preferable based on the
analyses above, although apart from CA1000) all molecules could be considered suitable
candidates for use as therapeutic IgGl.
For the anti- '1"ch molecules, the biophysical characteristics could be grouped within the family of
grafts based on the ation stability and Tm, such that the CA1 125 grafts potentially proved
more stable. The CA1102 grafts showed poorest Tm data and also showed the greatest tendancy to
aggregate via stress by agitation.
A study using CA1151.g4 showed that this molecule exhibited slightly increased aggregation
stability relative to CA1 1 125.g2 and seemed equivalent to the Tch molecules (CA922.gl and
CA997.g1.All four molecules showed equivalent Tm values. CA997, CA1125 and CA1151 show
very high levels of thermostability and very low levels of aggregate formation after ion.
Example 9 Anti-C. difficile toxin Mab r infection study.
The hamster ion study was performed by Ricerca Biosciences LLC, Cleveland, Ohio, USA.
The study protocol was approved by the Ricerca IACUC committee. Active and l
components (composition and dose) were blinded to Ricerca staff until after completion of the
planned 28 day study period.
Golden Syrian male hamsters (weight 82—103g, 54 days old) were individually housed in HEPA
d able cages and fed Teklad Global Diet 2016 and water ad libitum. After
acclimatisation, hamsters were pre-dosed (i.p.) with Mab mixtures or PBS (vehicle l) once a
day for each of 4 days: days -3, -2, -1 and 0. Two doses of Mab were investigated: high dose =
50mg/kg each of anti-Tch and anti-Tch components and low dose 5mg/kg each ofanti-Tch
and anti-Tch components.
The drug combination tested was composed of one anti-Tch antibody .gl) which
constituted 50% of the injected protein and two anti-Tch antibodies (CA1125.g2 and
CA1 15 1 . g4) which together constituted 50% ofthe injected protein but which alone constituted
% ofthe injected protein. Hamsters were sensitised (day -1) with 50mg/kg of Clindarnycin
ate in PBS (3.0.) before being challenged 1 day later (day 0) with 3.4 X 106 c.f.u. of
vegetative cells from strain ATCC43596. Vancomycin was dosed at 5mg/kg twice a day for 5 days
(p.o.) on days 1, 2, 3, 4, 5.
Viability checks were performed on animals twice a day, animals found to be in extremis were
euthanised and d as dead. Body weights were determined on each day of dosing, then twice
weekly and before euthanising ors. Gross necropsy was performed on all animals. Survival
curves were created by the method of Kaplan and Meier. Survival curves were analysed using the
P value from the log rank test compared to the Bonferroni corrected threshold of P = 0.005. The
ycin treated group were not included in the analysis. All statistical tests were done with
Prism V5.04. All groups contained 11 animals, except the Vancomycin control group which
contained 5 animals.
Survival curves can be seen in Figure 63. Hamsters receiving PBS (control) all died on days +2
and +3, whilst those receiving vancomycin treatment for 5 days all died on days +10 and +1 1.
rs receiving the high dose ofUCB Mab mixture all survived until day +11, thereafter only
two animals died until the end of the 28 day study. Hamsters receiving the low dose ofUCB Mab
PCT/G32012/052222
mixture all survived until day +3, thereafter animals were lost fairly ly until day +16 when all
had died. The data show ional levels and duration of protection when compared to published
data for use of anti-toxin Mabs in hamsters (18). These in Vivo data support the in vitro
observations ofvery high level performance for neutralization and stability.
There is no apparent link between death and body weight during the acute phase (days 1-5) of the
ion, Figures 64-65. Hence it may be supposed that hamsters die of overwhelming direct and
indirect effects ofTch and Tch. Hamsters which survive the acute period due to partial
protection (UCB low dose) of neutralizing Mabs lose weight, presumably due to gut damage and
altered nutritional status. It was notable that many of the hamsters which went on to survive the 28
period ofthe study due to the protective effects of the UCB high dose Mabs recovered from weight
loss and indeed even gained weight. This may be taken as evidence of the or protective
effects of the UCB Mabs enabling the gut to function as normal.
Table 15. Gross atholo_ scores
roup 1: lack Dark red
aecum caecum
It is clear that UCB Mabs were able to protect the large and small intestines from the bloody
effusions caused by Tch and Tch.
The results are shown in Figures 63 to 66
The photographs in Figure 66 show l gross pathologies for the swelling and bloody effusions
of caeca caused by Tch and Tch (left image, PBS control, animal death on day 2) and a normal
stool filled caeca after protection by UCB high dose Mabs (right image, UCB high dose, animal
surviving to day 28). These data show that after protection with a high dose ofUCB Mabs the
large intestine can return to normal morphology and function.
Example 10 Neutralisation of Tch from different ribotyped strains by purified Mab.
Clinical ions are caused by a variety of different strains. Strain ences are characterized
using a number of different methods of which ribotyping is a key one. Different ribotype strains
are observed to have different enicity, ion and sporulation properties. All of the Tch
neutralization shown above used Tch purified from strain known as VPIlO463. However, the
predominant aggressively pathogenic strain ated with out-breaks is called ribotype 027.
Other key pes include 078, 001
, 106. Amino acid sequence difference have been observed
between toxins produced by ent ribotypes and hence it is important that Mabs are e of
neutralizing toxin from a diverse set of clinical isolates. CA922, 997 and 1000 were tested for their
ability to neutralize Tch from strains 027 and 078 and compared to their abilities against Tch
from VP110463. Mabs were tested at 4 [Tch] and found to be capable of neutralizing all toxins
without significant difference at LDso, LD90 and LD95
Table 16
EC50 values (nglml) - Tch strain VPl 10463
Table 17
EC50 values (nglml) - Tch ribotype 027
Table 18
EC50 values (nglml) - Tch ribotype 078
Example 11 PK data
A PK study of a human IgGl (20mg/kg) in y hamsters. The hamster PK was found a half— life
similar to Mabs in mice or rats. (tl/z 6-8 days). i.p. and s.c. dosing were essentially the same.
The pharmacokinetics and bution to the gut of a hlgGl Mab was studied in ‘normal’ (non-
infected) golden Syrian hamsters. Purified Mab was stered to male hamsters (l20—l35g) by
CARE Research LLC, Fort Collins, Colorado, USA and samples were assayed by UCB Pharma.
The study was approved by the CARE IACUC committee. Eight s each received a single
dose of 20 mg/kg ofIgG1, four were closed i.p., four were dosed s.c. Blood was collected at l, 3, 8,
24, 48, 72, 103 and 168 hours post-dose, serum was separated before storage at -80°C. Blood was
also taken from two untreated hamsters in order to provide assay controls. Following euthanasia, a
20m length of colon was cut from the caeca junction onwards from each r. The colon
section was flushed with wash buffer (50% (v/v) PBS ning 50% (v/V) Sigma protease
inhibitor cocktail (P2714) before being opened and separation and removal of the mucosa from the
underlying muscle. Mucosal samples were placed in 0.51111 of wash buffer homogenized until
ly uniform and stored at 4°C before ate shipping on wet ice. For the anti-human IgGl
ELISA Nunc maxisorp 96 well plates were coated overnight in 0.1M NaHCO3 pH 8.3 with Goat
F(ab’)2 anti-human IgG-Fcy fragment (Jackson 109098), plates were washed with PBS—
Tween (PBS/0.1% (v/v) Tween 20) and then blocked with 1.0% (w/v) BSA & 0.1% (v/v) Tween
in PBS. Serum samples were diluted in sample-conjugate buffer (1% (w/v) BSA, 0.2% Tween in
PBS) and alter washing were revealed with goat uman kappa—HRP (Cambridge Bioscience
2060-05) in sample—conjugate buffer and TMB with a 2.5M H2804 stop solution.
Gut, Mucosa and Serum Levels:
Serum samples collected from blood taken at 168 hour time point and colon samples were
removed after this.
20mg/kg IP at 168 hour
—ng/mL per cm mucosa
1001
20mg/kg SC at 168 hour
76.6
163.7
153-3
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Serum Data
22626 1378 22371 2258
43287 7169 61290 17637
The data is also shown1n Figure 70 and 71
It was also shown that hlgGl could be found in ‘scrapings’ of the gut i.e that hIgGl gets into the
vasculature thy gut —- and so could be protective in ylactic dosing’. This effect would
be even more profound in humans since they have a cognate hFcRn.
Example 12 Serum Levels in Hamsters with C. difficile Infection
This study was to determine the serum concentration of CA725.0, CA726.0, CA997.g1
CA1125.g2, and CAO] 151.g4 following i.p. administration us doses detailed below) in the
Golden Syrian Hamster.
Humanised Mabs were quantified using liquid chromatography tandem mass spectrometry (LC-
MS/MS) analysis following tryptic digestion. Quantitation was achieved by comparison to
authentic standard material spiked at known concentrations into blank matrix, with spiked horse
myoglobin used as the internal standard.
A unique (“proteotypic”) peptide common to all of the humanised Mabs investigated was selected
(DTLMISR, a CH2 region peptide) and both s and calibration samples were tryptically
digested as ed. Tryptic digest of 5 ul serum samples was performed overnight using
sequencing grade modified Trypsin ga, Southampton, UK) following ration/
reduction with acetonitrile / Tris (2-carboxyethyl) phosphine and carbamido-methylation with
iodoacetamide (Sigma-Aldrich, Poole, UK).
The LC—MS/MS system consisted of a CTC HTS-x Autosampler (CTC ics, Zwingen,
Switzerland), a Agilent 1290 LC system (Agilent Technologies, Stockport, UK) and a Sciex 5500
QTrap MS system (AB Sciex, Warrington, UK), equipped with a Turbo V ion source operated in
electrospray mode. Analytes were separated using an Onyx Monolithic C18 column (100x4.6 mm,
enex, Macclesfield, UK) with a gradient of 2 to 95 % (v/V) water/acetonitrile (0.1 %
formic acid) delivered at 1.5 mL/min over 6 minutes. The ion volume was 10 uL; all of the
eluent was introduced into the mass spectrometer source. The source temperature of the mass
spectrometer was maintained at 600 °C and other source parameters (e.g. collision energy,
declustering potential, n gas pressure etc.) were optimized to achieve maximum sensitivity
for the peptide of interest. Selective transitions for each proteotypic peptide of interest were
monitored.
Unique (“proteotypic) peptides were selected for all of the es of interest; samples were
analysed following tryptic digestion.
Plasma concentrations calculated based on the peptides monitored are outlined below.
For CA164_00997 and CAl64~01151, interfering peaks were ed in the MRM traces. For
this reason, these two analytes could not be quantified in the samples.
Total h—IgG was quantified in all samples using a peptide common to all analytes of interest. This
was done using a combined standard curve of all five analytes. The validity ofthis approach is
demonstrated by the fact that the sum of the concentrations ed for CA164_00725 and
CA164_00726 are in good agreement (within experimental error) of the concentration observed for
total h—IgG.
Using this approach, the total concentration G in the samples of animals dosed with
CAl64_00997, CA164_01125 and CA164_01151 was ined.
Overall the data obtained indicate that the exposure of all five analytes of interest was similar for a
given dose.
Study groups
Blinded labels ent components
Actual Treatments Dose days
Grp Treatment Anti-toxin A Anti-toxin B
4 Treatment 3 Vehicle PBS SmL/kg i.p. 3, —2, —1, 0
2 Vancomycin Vancomycin Smg/kg b.i.d. p.0. 1, 2, 3, 4, 5
1 Treatment 1 UCB LD* 3, -2, ~1, 0 g1_P3 CA1125.g2_P3 CA1151.g4_P3
5mg/kg A 5mg/kg i.p. Smg/kg 2.5mg/kg 2.5mg/kg
Treatment 4 UCB HD* 3, -2, -1, 0 CA997.g1_P3 CA1125.g2_P3 CA1151.g4_P3
50mg/kg A 50mg/kg i.p. g g 25mg/kg
6 Treatment 5 Competitor LD“ 3, —2, -1, O CA726__P3 CA725_P3
5mg/kg A 5mg/kg i.p. Smg/kg Smg/kg
3 Treatment 2 Competitor HD‘ 3, -2, -1, O CA726_P3 CA725_P3
SOmg/kg A 50mg/kg i.p. 50mg/kg SOmg/kg
W0 2013;1038156 2012/052222
Group/time-m Serum conc ug/mLtotal h-lgG
mg/kg 997,
2.5 mg/kg
4345-8}- LONG 1125, 2.5
n mg/kg 1151
II CDC) N_\
Illllllll 0‘)N 50 mg/kg 725,
O)co 50 mg/kg 726
0').h
N O’) 4:.
N O) 01
\l —x
\1co
I 00 (.0
I (X) 4:.
0)(A) 50 mg/kg 997,
co 25 mg/kg
i00 00N 1125, 25
N00 00 (A) mg/kg 1151
004:.
03 01
mg/kg 725,
mg/kg 726
nd - not detected (LOQ = 2.5 pg/mL for all analytes
na - not analysed: interference in the sample was observed for 997 and 1151
Table 20 Antibody CA725 is prior art antibody MDX1388. Antibody CA726 is prior art antibody
CDAl as described (15) A summary of this data is ted in Figure 72.
- atholo 3
----“Red Red
_-____-control
References
1. Kuehne, S et al., “The role of toxin A and toxin B in Closlridz'um diflicile Infection” Nature
(2010) 467: 711-713.
2. Davies AH et a1, “Super toxins from a super bug: structure and function of Closirz‘dz'um
le toxins” Biochem. J (2011) 436: 517—526.
3. n, S et a1., “Differential xic Effects of Toxins A and B Isolated from
Clostrz'dz‘um diflicz‘le” Infect. 1m. (1984) 46: 324—331.
4. Du, T and Alfa, MJ “Translocation of Clostrz'dz'um diflicz‘le toxin B across polarized Caco—Z
cell monolayers is enhanced by toxin A” Can J Infect Dis. (2004) 15: 83-88.
Kim, Iaconis and Rolfe. “Immunization of Adult Hamsters against Clostrz'dz‘um diffcz'le-
ated Ileocecitis and Transfer of Protection to Infant Hamsters” Infect. 1mm. (1987)
55:2984-2992
Rupnik JCM (2003) 41:1118-1125
Chaves-Olarte IBC (1999) 274:11046—11052.
Lylerly, DM et al., “Passive Immunization of Hamsters against Disease Caused by
Closlrz'dium le by Use ofBovine Immunoglobulin G Concentrate” Infection and
ty (1991) 59:2215—2218.
Lylerly, DM et al., “Vaccination against Lethal Clostridium difificile Enterocolitis With a
Nontoxic Recombinant Peptide ofToxin A” Current Microbiology (1990) 21:29-32.
. Lylerly, DM et al., “Characterization ofToxins A and B of Clostrz’dium diflicz'le with
Monoclonal dies” Infect. 11m. (1986) 54:70-76.
11. Corthier et al., “Protection against Experimental Pseudomembranous s in Gnotobiotic
Mice by Use clonal Antibodies against Clostridium diflicile Toxin A” . Imm.
(1991) 59: 1192-1195.
12. Kink JA and Williams JA, odies to Recombinant Clostridz'um diflicz‘le Toxins A and B
Are an Effective Treatment and Prevent Relapse of C. diflicz‘le-Associated e in a
Hamster Model of ion” Infect. 11mm. (1998) 66:2018-2025.
13. Ma D, et al., Progenics inc. ASM Poster 27th May 2010
14. Hansen, G and Demarest, SJ. A2
. Babcock GJ, et al., “Human monoclonal antibodies directed against toxins A and B prevent
Closzridz'um dijj‘icile-induced mortality in hamster” . Imm.(2006) 74:6339—6347.
16. Lowy I et al., “Treatment with Monoclonal Antibodies against Clostrz'dz'um diflicile Toxins”
NEJM (2010) 362: 197~205.
17. Zubler, R. H., Erard, F., Lees, R. K., Van, L. M., Mingari, C., Moretta, L. & MacDonald, H.
R. (1985). Mutant EL—4 thymoma cells polyclonally te murine and human B cells via
direct cell interaction. J. Iimnunol. 134, 3662-3668
18. Babcook, J. 8., Leslie, K. B., Olsen, 0. A., Salmon, R. A. & Schrader, J. W. (1996). A novel
strategy for generating monoclonal antibodies from , isolated lymphocytes producing
antibodies of defined specificities. Proc. Natl. Acad. Sci. U. S. A 93, 848
19. Tickle, S., Adams, R., Brown, D., Griffiths, M., Lightwood, D. & Lawson, A. (2010). High-
Throughput Screening for High Affinity Antibodies ., pp. 303-307.
. Demarest et al., mAbs (2010) 2:190-198
21. a et al., J. Clin. Invest. (2006) 116: 2142-2151
22. Xu et a1., Vaccine (2005) 23:2658~2664.
23. Yousaf et a1., Clin. Exp. Immunol. (1986) 66:654-660
24. Mannik et a1., J. Exp. Med. (1971) 133: 713-739
. Nusrat et a1., Infection and Immunity (2001) 69: 1329-1336
26. Lima et a1., Infect Immun (1988) 56:582—588
27. Ravichandran et al J of Pharmacology and Experimental Therapeutics. (2006) 318: 1343—1351
28. shi et a1., (2009) e 27:2616-2619
29. Cohen et a1., Infect. Cont. and Hosp. Epidem. (2010) 31: 431-455
. Barbut et al., J. Clin. Microbiol. (2000) 38: 2386-2388
31. Wilcox et al., J. Hospital Infection (1998) 38: 93-100.
What is claimed is:
1. A pharmaceutical composition comprising a monoclonal antibody suitable for reducing
the duration and/or ty of diarrhoea or morbidity and/or mortality in a patient with
Clostridium ile ion or at risk of said infection n the antibody is specific
to: antigen Clostrz'dium diflicz'le toxin A (Tch) and binds 3 or more times in the range
$1827-D2249 or G2205-R2608 of SEQ ID NO: 171 with an EC50 in the range 0.1 to 10
ng/ml when toxin is used at an LDgo or higher.
A pharmaceutical composition according to claim 1, wherein the anti-Tch antibody
binds 4, 5, 6, 7, 8, 9,10,11,12,13,14 or 15 times or more.
A pharmaceutical ition according to claim 2, wherein the antibody EC50 is between
1 and l when toxin is at an LDgo or higher.
A pharmaceutical composition according to claim 2 or claim 3 wherein the maximal
inhibition of toxin is n 50 and 100% when toxin is used at an LD30 or higher.
A pharmaceutical composition according to any one of claims 1 to 4, further comprising a
monoclonal antibody specific to antigen Clostridium difiz‘cile toxin B (Tch).
A pharmaceutical ition according to any one of claims 1 to 5, wherein the anti—
Tch and/or anti—Tch antibody has an affinity in the range 50 to 600pM.
A pharmaceutical composition according to any one of claims 1 to 6, wherein one or more
dies is a neutralizing antibody effective against ribotypes 003, 012, 027 and 078.
A pharmaceutical composition according to any one of claims 1 to 7 comprising a
monoclonal antibody which specifically binds Tch comprising a heavy chain wherein
the variable domain of the heavy chain comprises at least one of a CDR having the
sequence given in SEQ ID NO:44 for , a CDR having the sequence given in SEQ
ID NO:45 for CDR—H2 and a CDR having the sequence given in SEQ ID NO:46 for CDR—
H3 and a light chain wherein the variable domain of the light chain comprises at least one
of a CDR having the sequence given in SEQ ID NO:41 for CDR—L1, a CDR having the
sequence given in in SEQ ID NO:42 for CDR—L2 and a CDR having the sequence given in
SEQ ID NO:43 for CDR—L3.
A pharmaceutical composition according to claim 8 comprising a monoclonal antibody
having a heavy chain sing the sequence given in SEQ ID NO:49 and a light chain
comprising the sequence given in SEQ ID NO:47.
. A pharmaceutical composition according to claim 1 comprising a onal antibody
which specifically binds Tch comprising a heavy chain wherein the variable domain of
the heavy chain comprises at least one of a CDR having the sequence given in SEQ ID
NO:54 for CDR—H1 a CDR having the sequence given in SEQ ID NOISS for CDR—H2
and a CDR having the ce given in SEQ ID NO:56 for CDR-H3 and a light chain
wherein the variable domain of the light chain comprises at least one of a CDR having the
sequence given in SEQ ID NO:51 for CDR-L1, a CDR having the sequence given in in
SEQ ID NO:52 for CDR-L2 and a CDR having the sequence given in SEQ ID NO:53 for
CDR-L3.
11. A pharmaceutical composition according to claim 10 comprising a monoclonal dy
having a heavy chain sing the sequence given in SEQ ID NO:59 and a light chain
comprising the sequence given in SEQ ID NO:57.
12. A pharmaceutical composition according to claim 1 comprising a monoclonal antibody
which specifically binds Tch comprising a heavy chain n the variable domain of
the heavy chain comprises at least one of a CDR having the sequence given in SEQ ID
NO: 124 for CDR-H1, a CDR having the sequence given in in SEQ ID NO:125 for CDR-
H2 and a CDR having the sequence given in SEQ ID NO: 126 for CDR-H3 and a light
chain wherein the le domain of the light chain comprises at least one of a CDR
having the sequence given in SEQ ID NO: 121 for , a CDR having the ce
given in in SEQ ID NO:122 for CDR—L2 and a CDR having the sequence given in SEQ ID
NO:123 for CDR—L3.
13. A pharmaceutical composition according to claim 12 comprising a monoclonal antibody
having a heavy chain comprising the sequence given in SEQ ID NO: 129 and a light chain
comprising the sequence given in SEQ ID .
14. A pharmaceutical composition according to claim 1 comprising a onal antibody
which specifically binds Tch comprising a heavy chain wherein the variable dOmain of
the heavy chain comprises at least one of a CDR having the sequence given in SEQ ID
NO:154 for CDR—H1, a CDR having the sequence given in in SEQ ID NO:155 for CDR-
H2 and a CDR having the sequence given in SEQ ID NO:156 for CDR—H3 and a light
chain wherein the variable domain of the light chain comprises at least one of a CDR
having the sequence given in SEQ ID NO:151 for CDR-Ll, a CDR having the sequence
given in in SEQ ID NO:152 for CDR—L2 and a CDR having the sequence given in SEQ ID
NO:153 for CDR-L3.
. A pharmaceutical composition according to claim 14 comprising a monoclonal antibody
having a heavy chain comprising the sequence given in SEQ ID NO:159 and a light chain
comprising the sequence given in SEQ ID NO:157.
16. A pharmaceutical composition according to claim 1 sing a monoclonal antibody
which specifically binds Tch having a heavy chain and a light chain wherein the heavy
chain variable region comprises a sequence selected from the group consisting of SEQ ID
N029, SEQ ID NO:19, SEQ ID NO:29 and SEQ ID N039 and the light chain variable
region comprises a sequence ed from the group consisting of SEQ ID NO:7, SEQ ID
NO:17, SEQ ID N027 and SEQ ID NO:37.
17. A ceutical composition ing to claim 5 comprising a monoclonal antibody
which specifically binds Tch having a heavy chain and a light chain wherein the heavy
chain variable region comprises a ce selected from the group consisting of SEQ ID
N0269, SEQ ID NO:79, SEQ ID NO:89, SEQ ID NO:99, SEQ ID NO:109, SEQ ID
NO:119, SEQ ID NO:139, SEQ ID NO:149 and SEQ ID NO:159 and the light chain
variable region comprises a sequence selected from the group consisting of SEQ ID
NO:67, SEQ ID NO:77, SEQ ID NO:87, SEQ ID NO:97, SEQ ID NO:107, SEQ ID
NO:117, SEQ ID NO:137, SEQ ID NO:147 and SEQ ID NO:157.
18. A pharmaceutical composition according to any one of claims 1 to 17, wherein at least one
antibody in the composition is c to Tch and at least one antibody in the
composition is specific to Tch.
19. A pharmaceutical composition according to claim 18, wherein the composition further
comprises at least a second antibody specific to Tch.
. Use of the pharmaceutical composition according to any one of claims 1 to 19 in the
manufacture of a medicament for the treatment or prophylaxis of Clostridium difi’zcz’le
ion or cations therefrom.
21. A pharmaceutical composition according to any one of claims 1 to 19, substantially as
herein described with reference to any one of the Examples and/or Figures thereof.
1/69
Figure 1
SEQ ID NO: 8 polynucleotide sequence encoding anti-toxin A antibody 922.g1 VK (ng)
GACCCTGTGA TGACCCAGAG TCCGAGCACT CTTTCTGCCT CCGTGGGAGA CCGCGTGACC
ATTACATGTC AGGCTTCACA AAGTATCTCC AATGCTCTGG CCTGGTATCA GCAGAAACCC
GGCAAAGCCC CTAAGCTGCT CATCTACTCT GCATCAAGCC TGGCTAGCGG CGTGCCAAGC
CGATTCAAGG GGAGCGGTTC TGGCACTGAG TTTACGCTGA CCATCAGTAG CTTGCAGCCT
GACGATTTTG CAACCTATTA CTGCCAGTAC ACACACTACT CCCATACATC TAAAAACCCA
TTCGGAGGGG GTACTAAGGT CGAAATAAAG
SEQ ID NO: 10 polynucleotide sequence encoding anti-toxin A antibody 922.g1 VH(gH1)
GAAGTGCAAT TGGTGGAAAG TGGCGGAGGA CTGGTGCAAC CCGGGGGTAG TCTGCGACTG
AGCTGTGCTG CCTCCGGCTT TACCATTAGC TATA TGAGCTGGGT TCGACAGGCC
CCTGGAAAAG GACTCGAATG GATCGGCATC ATATCTTCCG GTGGGCATTT CACCTGGTAC
GCAAACTGGG CTAAGGGGAG ATTCACGATT AGCAGCGACT CCACAACCGT GTACCTGCAA
ATGAACAGCC TGAGGGATGA GGACACTGCC ACATATTTCT GCGCACGCGC TTACGTGAGC
GGAAGCTCAT TTAATGGCTA TGCACTGTGG GGGCAAGGAA TGAC TGTCTCG
SEQ ID NO: 18 polynucleotide ce ng anti-toxin A antibody g1 ng
GACGTCGTGATGACTCAGAGCCCATCTAGTCTGAGCGCTAGCGTCGGAGACCGAGTCACAATTACC
TGTCAAGCCTCCCAGAGCATCTCCAACTACCTGGCCTGGTACCAACAGAAACCTGGCAAGGTGCCC
AAGCTGCTGATCTATAGTGCTTCCACACTCGCAAGCGGCGTTCCGTCACGCTTTAAGGGATCTGGC
TCTGGCACTCAGTTCACCTTGACGATCTCAAGCCTGCAGCCAGAAGATGTGGCCACCTATTACTGC
CAGTATTCCCACTACGGGACTGGGGTGTTCGGTGCCTTTGGAGGTGGGACCAAAGTGGAGATAAAG
Figure 2
SEQ ID NO: 20 polynucleotide sequence encoding anti-toxin A antibody CA923.g1 ng
GAAGTTCAACTTGTGGAATCTGGAGGCGGGCTCGTGCAGCCTGGTGGAAGCCTTAGACTGAGCTGC
GCTGCATCCGCATTTTCCCTGTCCAACTACTACATGAGCTGGGTGCGACAAGCACCAGGCAAGGGA
CTGGAATGGATTGGCATCATAAGCTCCGGTTCCAATGCCCTGAAATGGTACGCATCATGGCCGAAA
GGCCGCTTTACCATAAGCAAGGACTCCACCACCGTCTATCTGCAGATGAACTCATTGCGTGCCGAG
GACACTGCAACGTACTTCTGTGCTCGCAACTACGTGGGAAGCGGATCTTATTATGGCATGGATCTG
TGGGGACAAGGTACACTCGTGACCGTCTCG
SEQ ID NO: 28 polynucleotide ce encoding anti-toxin A antibody CA993.g1 ng
GATGTCGTGA TGACTCAGTC CCCCTCTACA TTGAGTGCCT CTGTCGGTGA TACC
ATCACCTGTC AAGCAAGCCA CAGC TCCTACTTCT CTTGGTACCA GCAAAAGCCG
GGAAAAGCCC TGCT GATTTATGGG GCCTCAACAC TGGCTTCTGG CGTGCCATCA
AGATTCAAGG GATCTGGCTC CGGCACTGAG CTTACACTGA CCATTAGCTC CCTGCAACCT
GACGATTTTG CTACCTACTA GTGC ACCGACTATA GTGGGATATA CGGA
TTTGGGGGAG GGACGAAAGT GGAAATCAAG
SEQ ID NO: 30 polynucleotide sequence encoding oxin A antibody CA993.g1 ng
GAAGTTCAGC TGGTCGAGAG CGGAGGCGGA CTGGTGCAAC CTGGTGGTAG CCTGAAACTC
TCTTGTACTG CCTCCGGGTT TTCCCTGAGC TCTTACTATA TGTCATGGGT GAGACAGGCT
CCCGGGAAAG AATG GATCGGGATT ATCTCCTCCG GCTCTTCCAC CACA
TGGTACGCCT CATGGGCAAA GGGGAGGTTT ACCATAAGCA AGACAAGCAC GACCGTGTAT
CTTCAGATGA ACTCCCTGAA GACGGAGGAT ACTGCCACCT ACTTTTGCGC TCGGGCCTAT
GTGGGCTCAA GCTCTTACTA TGGCTTCGAC CCATGGGGAC CACT TGTGACCGTC
SUBSTITUTE SHEET (RULE 26)
2/69
Figure 3
SEQ ID NO: 38 polynucleotide sequence encoding anti-toxin A antibody 995.g1 VL region
GACGTCGTGA TGACACAGAG CCCTTCAACA CTGTCTGCAA GCGTGGGCGA TAGGGTCACC
ATAACGTGCC AGGCCTCTCA ATCCATCAAC AACTATTTTA GCTGGTACCA GCAGAAGCCA
GCTC CGAAACTTCT GATCTACGGA GCTGCCAACC TGGCAAGTGG CGTGCCATCA
CGGTTCAAGG GATCCGGGAG TGAG TATACCCTGA CCATTTCATC TCTCCAACCC
TTCG CCACCTACTC CTGCCAGAAT GGCG TGCACATCTA TGGAGCTGCC
TTTGGCGGTG GGACAAAAGT GGAAATTAAG
SEQ ID NO: 40 polynucleotide sequence encoding anti-toxin A antibody 995.gl VH region
GAAGTTCAGC TGGTCGAGAG AGGG CTTGTGCAAC CTGGTGGCTC CCTCCGTCTG
AGCTGTACTG CTTCTGGATT CTCACTGAGC AATTACGACA TGATCTGGGT GCGACAGGCA
CCCGGCAAAG GACTGGAGTA CATTGGCTTC ATCAACACCG GGGGTATAAC GTACTATGCC
GCTA AGGGGCGCTT TACAATTAGT AGGGATTCCT CTACCGTGTA CCTGCAGATG
AACTCACTGA GAGCCGAGGA CACTGCCACA TATTTCTGCG CTCGGGTGGA TATC
GGGGCCTGGG GATT GTGGGGCCAA GGAACACTGG TCACCGTCTC G
SEQ ID NO: 48 polynucleotide sequence encoding anti-toxin A antibody 997.g1 VL region
GCACTCGTGATGACACAGAGCCCGAGTAGCTTTAGTGCTTCAACCGGTGATAGGGTCACTATTACT
TGCCAAGCCTCTCAGAGTATATCTAGCTATCTGAGCTGGTACCAGCAAAAGCCCGGGAAGGCTCCT
AAACTGCTGATCTACCGGGCTTCCACATTGGCCTCCGGCGTTCCCTCACGCTTTAGCGGCTCCGGA
TCCGGAACCGAGTACACCCTGACTATCTCTTGCCTGCAATCTGAGGACTTCGCAACCTACTATTGT
CTGGGCGTCTACGGATATAGCAACGATGACGGGATCGCCTTCGGCGGCGGTACCAAAGTGGAAATT
Figure 4
SEQ ID NO: 50 polynucleotide sequence encoding anti-toxin A dy 997.g1 VH region
GAGGTGCAACTTGTGGAAAGCGGGGGAGGACTGGTGCAGCCTGGGGGCTCATTGAGACTGAGCTGC
ACCGTTTCTGGTATTGACCTGAGCTCCCATCATATGTGCTGGGTGCGCCAGGCACCCGGAAAAGGA
CTGGAATACATCGGCGTCATATACCACTTTGGCTCTACATACTATGCCAACTGGGCAACTGGGCGA
TTCACAATTAGCAAGGACTCAACTACCGTTTACCTGCAAATGAATAGCCTGAGGGCTGAGGATACT
GCCACCTATTTCTGTGCCCGGGCTTCAATCGCCGGCTATTCTGCCTTTGATCCATGGGGGCAAGGA
ACACTCGTGACCGTCTCG
SEQ ID NO: 58 polynucleotide sequence encoding anti-toxin A antibody 1000.g1 VL region
GAAATCGTGA TGACGCAGTC ACCAAGCACA CTGAGCGCTT CTGTGGGAGA TCGGGTCACA
ATAACCTGTC AGGCCTCCCA GAGCATCTAC TCTTATCTGG CATGGTACCA GCAGAAGCCA
GGGAAAGCTC CCAAGCTGCT GATTTATGAC ACTT TGGCTTCCGG TGTTCCTAGT
AGGTTCAAAG GCTCCGGAAG CGAG TTTACCCTGA CCATCTCATC TCTGCAACCC
GATGACTTTG CCACATACTA TTGCCAGGGG AATGCCTACA ACTC ACACGACAAC
GCATTCGGGG GAGGCACCAA AGTCGAAATT AAG
SEQ ID NO: 60 polynucleotide sequence encoding anti-toxin A antibody 1000.gl VH region
GAAGTTCAGC TGGTCGAGAG GGGT TTGATTCAGC CCGGTGGCTC ACTTAGATTG
AGCTGCACCG TGTCCGGAAT CGATCTGTCA TCTGATGCCG TGGGCTGGGT GGCA
CCTGGGAAAG GACTGGAGTA TATAGGGATC ATCGCCACCT TCGACTCCAC ATACTACGCT
AGCTGGGCAA AAGGGCGCTT TACGATTAGC TCCT CTACTACCGT GTACCTCCAA
ATGAACTCAC CCGA TGCC ACTTATTTCT GTGCTCGGAC CGGTAGCTGG
TACTACATCT CTGGCTGGGG CTCCTACTAT TATGGCATGG ACCTGTGGGG GACA
CTCGTGACCG TCTCG
SUBSTITUTE SHEET (RU LE 26)
3/69
Figure 5
SEQ ID NO: 68 polynucleotide sequence encoding oxin B antibody 926.gl VL region
GATACCGTGCTGACCCAGAGCCCTGCTACATTGTCACTGAGCCCCGGGGAGAGGGCCACATTGAGC
TGCCGGGCTTCAAAATCCGTGTCCACCCTCATGCACTGGTTTCAGCAAAAGCCCGGGCAGGCCCCA
AAACTGCTGATCTACCTCGCATCTAACCTTGAATCTGGCGTGCCGGCCCGCTTTAGTGGCTCCGGA
AGCGGAACCGACTTCACACTGACGATTAGCTCCCTGGAGCCTGAGGATTTCGCCGTGTACTATTGC
CAGCAAACTTGGAATGACCCTTGGACTTTCGGGGGCGGTACTAAGGTCGAAATAAAG
SEQ ID NO: 70 polynucleotide sequence encoding anti-toxin B antibody 926.gl VH region
GAGGTGGAACTGCTCGAATCTGGTGGTGGGCTGGTGCAGCCCGGTGGATCTCTGAGATTGTCATGC
GAGGCATCCGGCTTTACCTTTTCCAACTACGGAATGGCCTGGGTGAGACAGGCCCCAACGAAGGGG
CTCGAATGGGTTACAAGCATCAGCTCTTCTGGGGGATCTACTTACTATCGCGATAGCGTCAAAGGC
CGGTTTACCATTAGCCGAGATAATGCCAAATCAAGCCTGTATCTGCAAATGAACAGCCTGAGGGCT
GAGGACACCGCCACATACTATTGTACAACCGTGATAAGGGGCTACGTGATGGACGCATGGGGACAG
GGGACATTGGTTACCGTCTCG
SEQ ID NO: 78 polynucleotide sequence ng anti-toxin B antibody 927.g2 VL region
GACACACAGA TGACCCAGAG CCCATCCACT TTGTCTGCAT CCGTGGGCGA CCGAGTGACA
ATCACCTGTA GAGCAAGCGG TTCCGTGAGC ACACTGATGC ATTGGTACCA GCAGAAGCCT
GGGAAGGCTC TGCT CAAA AACC TTGCCTCCGG CGTTCCAAGC
CGGTTTAGCG GTTCCGGATC TGGAACCGAG TTCACCCTGA CAAG CCTGCAACCC
GACGACTTCG CCACCTACTA TTGCCACCAG AGCTGGAATA GCGACACGTT CGGGCAAGGC
ACAAGGCTGG AAATCAAA
SEQ ID NO: 80 polynucleotide sequence encoding oxin B antibody 927.g2 VH region
GAGGTGCAAC TTGTGGAAAG CGGAGGGGGC GTGGTCCAAC CCGGAAGAAG TCTCCGTCTT
TCTTGCGCCG CAAGTGGCTT CACCTTTTCC AACTACGGAA TGGCCTGGGT TCGACAAGCT
CCTGGGAAAG GATTGGAGTG GGTGGCCACT ATCAACTATG GCAC GACACACTAC
CGAGACTCTG TTAAGGGGCG CTTTACGATT TCCCGCGACA ATAGCAAGAG CACCCTCTAC
CTGCAAATGA ATAGCCTCCG GGCCGAGGAT ACTGCTGTGT ACTATTGTAC CTCCATCTCA
CGGAGCCACT ATTG CTGGGGACAA GGCACACTCG TGACTGTCTCG
SUBSTITUTE SHEET (RULE 26)
2012/052222
4/69
Figure 6
SEQ ID NO: 88 polynucleotide sequence ng anti-toxin B antibody 1099.g2 VL region
GACGTCCAGC TCACTCAATC TCCCTCCTTT CTGTCTGCTT GCGA TCGCGTGACA
ATAACCTGCA CCAA ATCAATTAGC AACCATCTGG CATGGTATCA GGAGAAGCCT
GGCAAAGCCA ATAAGCTGCT CTCC GGCTCAACTC CCGG AAGC
CGATTTAGCG GATCTGGGAG CGGAACCGAG TTCACACTTA CCATTAGCTC CCTGCAACCG
GAGGACTTCG CCACCTATTA CTGCCAGCAA TACGACGAAT ACCCCTATAC GTTCGGCCAA
GGGACAAGAT TGGAAATCAA GCGTACG
SEQ ID NO: 90 polynucleotide sequence encoding anti-toxin B antibody 1099.g2 VH region
GAAGTTCAGC TGCAGGAATC TGGACCTGGC TTGGTGAAAC CAAGCGAGAC ACTTAGTCTC
ACTTGCACCG GCTT CTCCCTTCAA TCCTACACGA TCTCTTGGGT GCGGCAACCA
CCCGGGAAAG GACTGGAATG GATCGCAGCC GGGG GAGGGAGCAC CTATTACAAC
TTGCCTCTCA AGAGCCGCGT GACCATATCC CGTGACACAA GCAAGAGCCA GGTTTCCCTG
AAGCTGAGCT CCGTGACTGC TGCCGATACG GCTGTTTACT ATTGCACCCG CTGG
TATCCCCGTT CCTATTTCGA CTACTGGGGA AGAGGCACAC TGGTTACCGT CTCG
SEQ ID NO: 98 polynucleotide sequence encoding anti-toxin B antibody 1102.g4 VL region
AACATCGTGC TGACACAGTC TCCTGCAACC CTTTCACTGT CTCCAGGTGA ACGAGCAACC
CTGAGTTGTA GAGCCAGTCA GAGGATCTCC ACGAGCATTC ACTGGTATCA GCAAAAGCCT
GGGCAAGCTC CCAGACTCTT GATCAAGTAC GCCTCTCAGA GCATAAGTGG AGCT
AGGTTTAGCG GCTCAGGCTC AGGAACAGAC TTCACTCTGA GCTC CCTGGAACCG
GAGGACTTTG ATTA CTGCCAGCAA TCCTACTCCA GTCTGTACAC CTTCGGGCAG
GGTACTAAAC TGGAGATAAA G
Figure 7
SEQ ID NO: 100 polynucleotide sequence encoding anti-toxin B antibody 1102.g4 VH region
GAAGTGCAGC AATC CGGGGGAGGT TTGGTGCAAC CAGGTGGCTC ACTGAGACTG
AGCTGTGCCG TTTCCGGCTT TACGTTCTCA GACAGTTATA TGGCCTGGGT GCGTCAAGCA
CCTGGAAAAG GGCTGGAGTG GATTGCCAGT ATCAGCTATG GTGGGACCAT AATCCAGTAC
GGCGATAGCG TCAAGGGCAG GTTTACTATC TCCAGGGACA ACGCCAAGTC AAGCCTTTAC
CTGCAGATGA ATTCTCTCCG CGCAGAGGAT ACCGCTGTGT ATTACTGCGC TAGACGGCAG
GGAACCTACG CTCGATACCT GGACTTCTGG GGTCAGGGAA CACTCGTTAC AGTCTCG
SEQ ID NO: 108 polynucleotide sequence encoding anti-toxin B antibody 1114.g2 VL region
GCGACGCAAA TGACTCAGTC GCCCTCATCG CTTAGCGCGT CCGTCGGAGA GACG
ATCACCTGCC GCGCATCAGA GTCC ACACTCCTCC ACTGGTATCA GCAGAAACCG
GGGAAGGCAC CAAAACTCTT GATCTACAAA GCCAGCAACC CCGG TGTCCCGTCA
AGGTTCTCCG GGAGCGGTTC GGGGACAGAC TTTACTTTGA CCATTTCGTC GCCG
GAGGACTTCG CCACCTATTA CTGTCATCAG TCATGGAACT CACCTCCCAC ATTTGGCCAG
GGAACGAAAC TCGAAATCAA G
SEQ ID NO: 110 polynucleotide sequence encoding anti—toxin B antibody 1114.g2 VH region
GAAGTACAAC TCGTAGAGTC AGGGGGTGGG CTGGTCCAAC GCTC CCTTCGGCTT
TCGTGTGCCG CCTCGGGATT CACGTTTAGC GGTA TGGCCTGGGT GAGGCAGGCA
AAGG GTCTTGAGTG GGTAGCGATC ATCAACTATG ATGCAAGCAC CACCCACTAC
AGGGATAGCG TCAAGGGACG CTTTACTATC AGCCGGGATA ATGCGAAATC CTCGCTCTAT
CTGCAGATGA ACTCCCTCAG AGCCGAGGAC ACCGCAGTGT GCAC ACGATACGGA
CGCTCGCACT ATTTCGACTA ACAG GGGACGCTCG TAACTGTCTC G
SUBSTITUTE SHEET (RULE 26)
/69
Figure 8
SEQ ID NO: 118 polynucleotide sequence encoding anti-toxin B antibody 1114.g8 VL region
GACACGGTCC TGACTCAGTC GCCCTCATCG CTTAGCGCGT GAGA TAGAGTGACG
ATCACCTGCC GCGCATCAGA GTCGGTGTCC ACACTCCTCC ACTGGTATCA GCAGAAACCG
GCAC CAAAACTCTT GATCTACAAA GCCAGCAACC TTGCGTCCGG TGTCCCGTCA
AGGTTCTCCG GTTC GGGGACAGAC TTGA CCATTTCGTC GCTTCAGCCG
GAGGACTTCG CCACCTATTA CTGTCATCAG TCATGGAACT CACCTCCCAC ATTTGGCCAG
GGAACGAAAC TCGAAATCAA G
SEQ ID NO: 120 polynucleotide sequence ng anti-toxin B antibody 1114.g8 VH region
GAAGTACAAC TCGTAGAGTC AGGGGGTGGG CTGGTCCAAC GCTC CCTTCGGCTT
TCGTGTGCCG CCTCGGGATT CACGTTTAGC AATTACGGTA TGGCCTGGGT GAGGCAGGCA
AAGG GTCTTGAGTG GGTAGCGATC ATCAACTATG ATGCAAGCAC CACCCACTAC
AGGGATAGCG TCAAGGGACG CTTTACTATC AGCCGGGATA ATGCGAAATC CTCGCTCTAT
ATGA ACTCCCTCAG AGCCGAGGAC ACCGCAGTGT ACTATTGCAC ACGATACGGA
CGCTCGCACT ATTTCGACTA TTGGGGACAG GGGACGCTCG TAACTGTCTC G
SEQ ID NO: 128 polynucleotide sequence ng anti-toxin B antibody 1125.g2 VL region
GATATACAAA TGACTCAGAG CCCTAGCTCA CTGAGCGCTT CTGTGGGCGA TCGTGTGACA
ATCACTTGCA AAGCAAGCCA GAACATCTAT ATGTACCTGA ATTGGTACCA GCAAAAACCG
GGAAAAGCTC CCAAGCGCCT GATTTACAAC ACCAATAAGC TGCATACCGG CGTGCCAAGC
CGTTTTAGCG GATCTGGCTC TGGAACCGAA CTGA CCATAAGCTC CCTGCAACCG
GAAGACTTTG ACTA TTGCCTCCAG CACAAATCCT TCCCCTATAC GTTCGGACAA
GGGACCAAAC TGGAAATCAA A
SEQ ID NO: 130 polynucleotide sequence encoding anti-toxin B antibody 1125.g2 VH region
CAGC AAAG CGGCGGAGGA TTGGTGCAAC CTGGTGGCTC TCTTCGCCTG
TCTTGCGCTG CAAGCGGCTT TACGTTCCGC GATAGCTTTA TGGCTTGGGT GCGACAAGCT
CCTGGGAAAG GGCTGGAATG GGTCGCTAGC TACG AAGGCGACAA GACTTACTAT
GGGGACTCTG TGAAAGGCCG ATTCACCATT AGCCGAGACA ACGCAAAGAA GTAC
CTGCAGATGA TGCG TGCCGAAGAT ACCGCCGTGT ACTATTGCGC TAGGCTGACG
ATCACTACAA GCGGAGATAG CTGGGGACAA GGGACAATGG TGACCGTCTC GAGC
SEQ ID NO: 138 polynucleotide sequence encoding anti-toxin B antibody 1129.g1 VL region
GACACCCAGA AGTC TCCGTCAAGC CTTTCTGCCT CTGTTGGAGA TCGAGTCACA
ATTACGTGCA GCCA ACACGTGGGT ACCAACGTGG ACTGGTATCA ACAGAAGCCA
GGGAAGGTCC CCAAACTGCT GATCTACGGT GCCAGTATTC GCTATACCGG CGTGCCTGAT
CGCTTCACCG GAAGCGGGTC CGAT TTCACACTGA CAATCAGCTC CCTGCAACCT
GAAGACGTGG CTACTTACTA CTGCCTGCAG TACAACTATA ATCCCTACAC CTTTGGCCAG
GGCACCAAAC TGGAGATAAA G
SEQ ID NO: 140 polynucleotide sequence ng anti-toxin B antibody 1129.g1 VH region
GAGGTGCAAC AATC AGGAGGTGGC GTGGTTCAGC CCGGTAGATC ACTTCGTCTG
AGTTGTGCAA CAAGCGGCTT CTCC AACTTCGGGA TGTCTTGGGT TAGACAGGCT
AAGG GCCTCGAATG GGTGGCTAGT ATTAGCCCAA GCGGGGGAAA CGCCTACTAT
AGGGACAGCG TGAAAGGACG CTTCACTATC AGCCGAGATA ACTCCAAGAC CACGCTGTAT
CTGCAGATGA ATAGTCTGAG GGCCGAGGAT ACCGCAGTGT ACTACTGCAC TCGACGGGCC
TATTCTTCCC CTTTTGCCTT TTGGGGACAG GGGACTCTGG TGACAGTCTC GAGC
SUBSTITUTE SHEET (RULE 26)
6/69
Figure 9
SEQ ID NO: 148 polynucleotide sequence encoding anti-toxin B antibody 1134.g5 VL region
GACGTCCAGC AATC TCCCTCCTTT CTGTCTGCTT CTGTGGGCGA TCGCGTGACA
ATAACCTGCA AGGCCTCCAA ATCAATTAGC AACCATCTGG CATGGTATCA GGAGAAGCCT
GGCAAAGCCA ATAAGCTGCT GATCCACTCC GGCTCAACTC TGCAACCCGG TACCCCAAGC
CGATTTAGCG GATCTGGGAG CGGAACCGAG CTTA CCATTAGCTC CCTGCAACCG
GAGGACTTCG CCACCTATTA CTGCCAGCAA TACGACGAAT ACCCCTATAC GTTCGGCCAA
GGGACAAGAT TGGAAATCAA G
SEQ ID NO: 150 polynucleotide sequence encoding anti-toxin B antibody 1134.g5 VH region
GAAGTTCAGC TGCAGGAATC TGGACCTGGC TTGGTGAAAC AGAC ACTTAGTCTC
ACTTGCACCG TTTCCGGCTT CTCCCTTAAT TCCTACACGA TCACTTGGGT GCGGCAACCA
CCCGGGAAAG GACTGGAATG AGCC ATTAGCGGGG GAGGGAGCAC CTATTTCAAC
TCGGCTCTCA AGAGCCGCGT GACCATATCC CGTGACACAA GCAAGAGCCA GGTTTCCCTG
AAGCTGAGCT CCGTGACTGC TGCCGATACG GCTGTTTACT ATTGCACCCG ACCTCGCTGG
TATCCCCGTT CCTATTTCGA CTACTGGGGA AGAGGCACAC CCGT CTCG
SEQ ID NO: 158 polynucleotide sequence encoding oxin B antibody 1151.g4 VL region
CAAA TGACTCAGTC GCCCTCATCG CTTAGCGCGT CCGTCGGAGA TAGAGTGACG
ATCACGTGCA AAGCATCACA AAATGTCGGG AACAATGTGG CATGGTATCA ACCG
GGGAAGGCAC CAAAACTCTT GATCTACTAC GCCAGCAACA CTGG TGTCCCGTCA
AGGTTCACGG GAGGGGGTTA CGGGACAGAC TTTACTTTGA CCATTTCGTC GCCG
GAGGACTTCG CCACCTATTA GAGG GTCTACCAGT GGAC CCAG
GGAACGAAAG TGGAAATCAA G
Figure 10
SEQ ID NO: 160 poiynucleotide sequence encoding anti-toxin B antibody 1151.g4 VH region
GAAGTACAAC TCCAAGAGTC GGGGCCTGGT CTGGTCAAGC CGTCCGAAAC ACTTTCGCTG
ACGTGTACGG TATCAGGATT CTCACTTACA TCATACTACG TCCACTGGGT GAGGCAGCCA
CCCGGGAAGG GTCTTGAGTG GATGGGCTGC ATTAGAACCG GAGGGAATAC CGAGTACCAG
AGCGAATTTA AGAGCCGCGT CACTATCAGC CGGGATACGT CCAAAAACCA GGTGTCGCTC
AAATTGTCCT CCGTGACGGC CGCTGACACC TACT ATTGCGCGCG AGGAAACTAT
GGCTTTGCGT ATTGGGGACA GGGGACGCTC GTAACTGTCT CG
SEQ ID NO: 168 polynucleotide sequence encoding anti-toxin B antibody 1153.g8 VL region
GATATACAGA TGACTCAGTC CCCTTCTAGC CTTTCAGCTT GCGA TAGAGTGACT
ATCACGTGTA AGGCTAGTCA TAAC AAGTATCTGG ACTGGTACCA GCAGAAACCC
GGGAAGGTTC CCAAGCTGCT GATCTACAAC ATCCAGTCCC TGCATACAGG CATTCCTAGC
CGGTTTAGCG GATCTGGTTC CGAC TTCACCCTGA CAATCAGCTC TCTGCAACCA
GAAGACGTGG CCACCTATTA CTGCTTCCAG CACAATAGTG GCTGGACTTT TGGACAAGGT
ACCAGGCTGG AGATCAAA
SEQ ID N0: 170 polynucleotide ce encoding anti-toxin B dy 1153.g8 VH region
GAGGTTCAGC TGGTGGAATC AGGAGGGGGT CTGGTGCAAC CAGGAGGCTC CCTGAAACTG
TCTTGCGCCG CAAGCGGCTT TACGTTTACC CAGGCCGCTA TGTTCTGGGT TAGGCAGGCC
AAGG AAGG AAGA ATCAGCACCA AGAGCAACAA TTTCGCTACG
TACTATCCGG ACTCCGTGAA AGGCCGGTTT ACCATTTCTC GCGATGACAG CAAGAACACC
CTGC AGATGAACAG TCTCAAGACC GAGGACACAG CCGTGTACTA TTGTACTGCT
CCCGCCTATT ATTACGATGG CACAGTGCCT TTCGCATACT GGGGACAGGG
TACTTTGGTG ACTGTCTCG
SUBSTITUTE SH EET (RU LE 26)
7/69
Figure 11
Sera titres from 4 rabbits immunised with Tch toxoid and 5 rats immunised with Tch binding
domain (TchIZ34). ELISA data generated using Tch toxin or Tch binding domain coated on
an ELISA plate
Rabbit Terminal sera titre against Tch
«mm-- Oontroi sera
Dilution factor
Rat al sera titre against Tch1234
~0— Oontrol sera
Dilution factor
SUBSTITUTE SHEET (RULE 26)
8/69
Figure 12 Anti Tch (Ribotype 003) in-vitro neutralization data for single Mabs (X axis cone.
(ng/ml) and Y axis % Neutralization)
lisation
conc. n / ml
Neutralisafion
SU BSTITUTE SH EET (RU LE 26)
9/69
Figure 13 Anti Tch (Ribotype 003) in-vitro neutralization data for single Mabs (X axis cone.
(ng/ml) and Y axis % lization)
Neutralisation
Neutralisafion
922+923
Neutralisafion
SUBSTITUTE SHEET (RULE 26)
/69
Figure 14 Anti Tch (Ribotype 003) in-vitro neutralization data for paired Mabs (X axis
conc. (ng/ml) and Y axis % Neutralization)
922+925
Neutralisation
Neutralisafion
SUBSTITUTE SHEET (RULE 26)
11/69
Figure 15 Anti Tch (Ribotype 003) in-vitro neutralization data for paired Mabs (X axis
conc. ) and Y axis % Neutralization)
Neutralisation
923+1000
Neutralisation
SUBSTITUTE SHEET (RULE 26)
2012/052222
12/69
Figure 16 Anti Tch (Ribotype 003) in-vitro neutralization data for three Mab mixtures (X
axis conc. (ng/ml) and Y axis % Neutralization)
922+923+995
Neutralisafion
922+923+997
Neutralisafion
SUBSTITUTE SHEET (RULE 26)
13/69
Figure 17 Anti Tch (Ribotype 003) in-vitro neutralization data for three Mab mixtures (X
axis conc. (ng/ml) and Y axis % Neutralization)
+997
Neutralisafion
922+997+1000
Neutralisafion
SUBSTITUTE SH EET (RULE 26)
2012/052222
14/69
Figure 18 Anti Tch (Ribotype 003) in—vitro neutralization data for three Mab mixtures (X
axis conc. (ng/ml) and Y axis % Neutralization)
923+995+997
Neutralisation
Neutralisation
SUBSTITUTE SHEET (RULE 26)
/69
Figure 19 Anti '1‘ch (Ribotype 003) in-vitro neutralization data for four and five Mab
mixtures (X axis cone. (ng/ml) and Y axis % Neutralization)
922+923+995+997
lisafion
Neutralisation
SUBSTITUTE SHEET (RULE 26)
WO 38156
16/69
Figure 20 Anti Tch (Ribotype 003) in-vitro neutralization data for four and five Mab
mixtures (X axis conc. (ng/ml) and Y axis % Neutralization)
923+995+997+1000
Neutralisa’don
Neutralisafion
SU BSTITUTE SH EET (RU LE 26)
17/69
Figure 21 Anti Tch (Ribotype 003) ro neutralization data for single and paired Mabs
at different Tch concentrations (X axis is conc ng/ml)
Neutraiization LD max (circle)
LD 95 (triangle)
LD 90 (square)
% LD 80 (diamond)
w'fi ‘tw$55
Mr)» 9’;«a
Neutralization z
s:é;
at; ’1’}
LD max (Circle)
LD 95 (triangle)
0/0 LD 90 (square)
LD 80 (diamond)
Neutralization ‘3." egg}!
WWWW
2“ ; 'W‘XFIVAbIOOO
> 3 LD max (circle)
f 1 LD 95 (triangle)
wt???
LD 90 (square)
€33) E LD 80 (diamond)
SUBSTITUTE SHEET (RULE 26)
18/69
Figure 22 Anti '1‘ch (Ribotype 003) in—vitro neutralization data for single and paired Mabs
at different Tch concentrations (X axis is cone. ng/ml)
M 6% c”;
{5 Ab 922
~12»,~22; LD max (circle)
4..) LD 95 (triangle)
(D LD 90 (square)
O LD 80 (diamond)
Neutralization Ab 922+997
LD max (circle)
LD 95 (triangle)
LD 90 (square)
0/0 LD 80 nd)
Neutralization Ab 922+1000
LD max e)
LD 95 (triangle)
LD 90 (square)
LD 80 (diamond)
SUBSTlTUTE SHEET (RULE 26)
19/69
Figure 23 Anti '1‘ch (Ribotype 003) ro neutralization data for single and to five Mab
mixtures at different Tch concentrations (X axis cone. ng/ml)
Neutraiization 4.3";a;
.3145. €272 fl 7.? LD max (circle)
3 ‘
’6 l '
g f l; ”f, 3 LD 95 (triangle)
LD 90 (square)
837’
% LD 80 nd)
Neutralization f1}?
if: Ab 997+1009
WW.___.
’ ” jfle' LD max (circie)
:5 3; LD 95 (triangle)
w" LD 90 (square)
LD 80 (diamond)
Neutralization _/ Ab 922+ 997+1000
mM...... 77777 if...“ .....
é”; If E? LD max (circle)
iii LD 95 (triangle)
, ! f LD 90 (square)
0/0 LD 80 (diamond)
SUBSTITUTE SHEET (RULE 26)
/69
Figure 24 Anti Tch (Ribotype 003) in-vitro neutralization data for single and to five Mab
mixtures at different Tch concentrations (X axis is cone. ng/ml
yst ‘
x’ LD max (circle)
4:" l 3‘ } 3:" l LD 95 (triangle)
k} 455*
LD 90 (square)
‘33) LD 80 (diamond)
Neutralization Wmmmqunmq
Ab922+997+1000+995
fl iii (I 3 LD max (circle)
a E LD 95 (triangle)
' V
0/0 { LD 90 e)
LD 80 (diamond)
w}. R}(if!
”Jo at?
‘65 a:
1—3- Ab922+997+1000+995 +923
g ‘3? LD max (circle)
a 33 LB 95 gle)
2 LD 90 (square)
a" 3 LD 80 (diamond)
SUBSTITUTE SHEET (RULE 26)
21/69
Figure 25 Anti Tch (Ribotype 003) in—vitro neutralization data for single Mabs (Y axis
neutralization X axis conc ng/ml for 1125.g2, 1134.g5 and 927.g2 respectively)
Neutralisation
.._.
lisafion
SUBSTITUTE SHEET (RU LE 26)
22/69
Figure 26 Anti Tch (Ribotype 003) in-vitro neutralization data for single Mabs Y axis
lization X axis cone ng/ml for1153.g8 and 1102.g4 respectively)
.‘12
Neutralisafion
SUBSTITUTE SHEET (RULE 26)
23/69
Figure 27 Anti Tch (Ribotype 003) in-vitro neutralization data for paired Mabs
Y axis neutralization X axis conc ng/ml for combinations of 927+1099, 927+1102, 927+1114
respectively)
927+1099
Neutralisafion
927+‘l 102
Neutralisa’u’on
SUBSTITUTE SHEET (RULE 26)
24/69
Figure 28 Anti Tch (Ribotype 003) in—vitro neutralization data for paired Mabs (Y axis
neutralization X axis conc ng/ml for combinations of 25, 927+1134, 1099+1114
respectively)
927+1125
Neutralisafion
927+1 134
1099+1114
Neutralisafion
SUBSTITUTE SHEET (RULE 26)
/69
Figure 29 Anti Tch (Ribotype 003) in-vitro neutralization data for paired Mabs (Y axis
neutralization X axis conc ng/ml for combinations of 1102+1114, 125, 1114+1134
respectively)
1102+1114
Neutralisatjon
Neutralisafion
SU BSTITUTE SHEET (RULE 26)
26/69
Figure 30 Anti Tch ype 003) in—vitro neutralization data for paired Mabs (Y axis
neutralization X axis conc ng/ml for combinations of 1114+1151, 1114+1153, 1125+1134
respectively)
1114+1151
Neutralisafi
1114+1153
Neutralisation
SUBSTITUTE SHEET (RULE 26)
27/69
Figure 31 Anti Tch (Ribotype 003) in-vitro neutralization data for three Mab mixtures (Y
axis neutralization X axis conc ng/ml for combinations of 1125+1134+1114, l34+927,
1125+1151+1114 respectively)
1125+1134+1114
Neutralisafion
Neutralisation
"('6
SUBSTITUTE SHEET (RULE 26)
28/69
Figure 32 Anti Tch (Ribotype 003) in-vitro neutralization data for three Mab mixtures (Y
axis neutralization X axis cone [1ng for 1125.+1151+927, 1125.g2+1134.g5+927.g2
respectively)
151+927
Neutralisafion
1125.gz+1134.gs+927.gz
1125.g2+1134.95+1153.g8
Neutralisafion
SU BSTITUTE SHEET (RULE 26)
29/69
Figure 33 Anti Tch (Ribotype 003) ro neutralization data for three Mab mixtures
1125.gz+1134.gs+11o2.g4
SU BSTITUTE SHEET (RULE 26)
/69
Figure 34 Anti Tch (Ribotype 003) in-vitro neutralization data for two Mab mixtures at
ent toxin concentrations
CA164_1125 + CA164_927 - TCdB strain VP! 10463 (LD60)
percentage neutralisation
1 00
(LD77)
percentage neutralisation
CA164_1125 + CA164_927 - Tch strain VP! 10463 (LD85)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
31/69
Figure 35 Anti Tch (Ribotype 003) in—vitro neutralization data for two Mab mixtures at
different toxin concentrations
1125 + CA164_1102 - Tch strain VPI 10463 (LD60)
percentage neutralisation
CA164__1125 + CA164_1102 — Tch strain VPI 10463 (LD77)
percentage neutralisation
1125 + CA164_1102 — Tch strain VPI 10463 (LD85)
percentage neutralisation
SU BSTITUTE SH EET (RU LE 26)
WO 38156
32/69
Figure 36 Anti 1‘ch (Ribotype 003) in-vitro neutralization data for two Mab es at
different toxin concentrations
CA164_1125 + CA164_1114 - Tch strain VPI 10463 (LD60)
percentage neutralisation
CA164_1125 + CA164_1114 - Tch strain VPI 10463 (LD77)
percentage neutralisation
1125.2 + 1114.
CA164__1125 + CA164__1114 — Tch strain VPI 10463 (LD85)
percentage neutralisation
SUBSTITUTE SH EET (RULE 26)
33/69
Figure 37 Anti Tch (Ribotype 003) in—vitro neutralization data for two Mab mixtures at
different toxin concentrations
CA164_1125 + CA164_1134 - Tch strain VPI 10463 (LD60)
percentage lisation
1125.2 + 1134.5 n-lml
CA164_1125 + CA164_1134 - Tch strain VPI 10463 (LD77)
percentage neutralisation
percentage neutralisation
SUBSTITUTE SH EET (RULE 26)
2012/052222
34/69
Figure 38 Anti 1‘ch (Rihotype 003) in-vitro neutralization data for two Mab mixtures at
different toxin concentrations
CA164_1125 + CA164_1151 - Tch strain VPI 10463 (L060)
percentage neutralisation
CA164_1125 + CA164_1151 - Tch strain VPI 10463 (LD77)
percentage neutralisation
1125.2 + 1151.
1125 + CA164_1151 — Tch strain VP! 10463 (LD85)
percentage neutralisation
SUBSTITUTE SH EET (RU LE 26)
/69
Figure 39 Anti 1‘ch (Ribotype 003) in-vitro neutralization data for two Mab mixtures at
different toxin concentrations
CA164_1125 + CA164_1153 - Tch strain VPI 10463 (LD60)
percentage neutralisation
CA164_1125 + _115-3 Tch 'strain VPI 10463 (LD77)
percentage lisation
CA164_1125 + CA164_1153 - Tch strain VPI 10463 (LD85)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
36/69
Figure 40 Anti 1‘ch ype 003) in-vitro neutralization data for two Mab mixtures at
different toxin concentrations
CA164_1125 + CA164_1134 (25:75) - Tch strain VPI 10463 (LD60)
percentage neutralisation
1125.2 + 1134.5 25:75 n/ml
CA164_1125 + CA164_1134 (25:75) - Tch strain VPI 10463 (LD77)
tage neutralisation
1125.2 + 1134.35 25:75 nulmi
CA164_1125 + +CA164_1134 (25:75) - Tch strain VPI 10463 (LD85)
percentage neutralisation
100
2 + 1134.5 25:75 no/ml
SUBSTITUTE SHEET (RULE 26)
37/69
Figure 41 Anti Tch (Ribotype 003) in-vitro neutralization data for two Mab mixtures at
different relative Mab ratios and different toxin concentrations
CA164_1125 + CA164_1151 (25:75) - Tch strain VPI 10463 (LD60)
percentage neutralisation
CA164_1125 + CA164__1151 ) - Tch strain VPl 10463 (LD77)
percentage neutralisation
1125 + CA164_1151 (25:75) - Tch strain VPI 10463 (LD85)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
38/69
Figure 42 Anti 1‘ch (Ribotype 003) in-vitro lization data for two Mab mixtures at
different relative Mab ratios and different toxin concentrations
CA164_1125 + CA164_1153 (25:75) - Tch strain VPI 10463 (LDSO)
tage neutralisation
CA164,1125 + CA164_1153 (25:75) — Tch strain VPI 10463 (LD77)
percentage neutralisation
1 10
1125.02 +1153.
CA164_1125 + CA164__1153 (25:75) - Tch strain VPI 10463 (L085)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
39/69
Figure 43 Anti Tch (Ribotype 003) in-vitro neutralization data for two Mab mixtures at
different relative Mab ratios and different toxin trations
CA164_1125 + CA164_1134 (75:25) - Tch strain VPI 10463 (LD60)
percentage neutralisation
CA164__1125 + CA164__1134 (75:25) - Tch strain VPI 10463 (LD77)
percentage lisation
. 10 100
2 + 1134.05 7525 nu/mt
CA164_1125 + CA164_1134 (75:25) - Tch strain VPI 10463 (LD85)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
40/69
Figure 44 Anti 1‘ch (Ribotype 003) ro neutralization data for two Mab mixtures at
different relative Mab ratios and different toxin concentrations
CA164_1125 + CA164_1151 (75:25) - Tch strain VPI 10463 (LDBO)
percentage neutralisation
CA164__1125 + CA164__1151 (75:25) - Tch strain VPI 10463 (LD77)
percentage lisation
0.1 1 10
1125.2 +1151.
CA164_1125 + CA164_1151 (75:25) - Tch strain VPI 10463 (LD85)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
41/69
Figure 45 Anti 1‘ch (Ribotype 003) in-vitro neutralization data for two Mab mixtures at
different relative Mab ratios and different toxin concentrations
CA164_1125 + CA164_1153 (75:25) - Tch strain VPI 10463 (LD60)
tage neutralisation
CA164_1125 + 1153 (75:25) - Tch strain VPI 10463 (LD77)
percentage neutralisation
SUBSTITUTE SH EET (RULE 26)
42/69
Figure 46 Tch strain VPI 10463 neutralisation, Antibody singles and pairs, Constant toxin
dose (LD80)
Vfii$§e neaéérsasaiéan
f .926 (star)
112:5 (circle)
11._34+~~1125 (square).
§€fz§a§§8§§§ $39§§§¥3§§2$32§§a
3‘538‘
\ 1134 (star)
$33i \
1125 (circle)
3;} 1134+1125 (square)W
$3 flex 3‘.~**"*me
gg ‘5;wa
”'23
$3"? 3 $3 ”33%. “KKK?,
§n§o§ mm?
mama-gel mafisfimfiw
1102 (star)
1125 e)
8»? ’ 1102+1125 (square)
\afiiii‘fliiQ mm:
SUBSTITUTE SHEET (RULE 26)
43/69
Figure 47 Tch neutralisation, Antibody singles and pairs, Constant toxin dose (LDSO)
§€f£€§§i$§£ 22233223283299
1151 (star)
“93%. 1125 (circie)
1151+1125 (square)
gammmga afim
“$29
927 (star)
“$99"'
1125 (circle)
mrt: 25 (square)
{3"V1)
6;: w!!- ”A; .4 ’2»; Ma 2123£72 145. ‘LJ f22ff»
3:32 . 1114 (star)
1125 (circle)
92 1114+1125 (square)
SUBSTITUTE SHEET (RULE 26)
44/69
Figure 48 Tch neutralisation, Antibody s and pairs, Constant toxin dose (LDSO)
Tch strain VPl 10463 (LD80)
percentage neutralisation
100
[antibody] ng/ml
fir 1125
O 1153
I 1125+1153
SUBSTITUTE SHEET (RULE 26)
45/69
Figure 49 Tch neutralisation, dy singles and pairs, Varying toxin dose (straddling)
Tch strain VPI 10463 (LD7’5)
percentage neutralisation
Tch strain VPI 10463 (LD86)
percentage neutralisation
Tch strain VPI 10463 (LDQO)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
46/69
Figure 50 '1‘ch neutralisation, Antibody singles and pairs, Varying toxin dose (straddling)
Tch strain VP] 10463 (LD75)
percentage lisation
percentage neutralisation
Tch strain VPI 10463 (LDQO)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
47/69
Figure 51 Tch neutralisation, Antibody singles and pairs, Varying toxin dose (straddling)
Tch strain VP! 10463 (L075)
percentage neutralisation
‘1'ch strain VPII 10463 (LD86)
percentage neutralisation
1134.05 nI/ml
TCdB strain VPI 10463 (LDQO)
percentage lisation
0.1 10
SU BSTITUTE SHEET (RULE 26)
48/69
Figure 52 Tch neutralisation, Antibody singles and pairs, Varying toxin dose (straddling)
TCdB strain VP! 10463 (LD75)
percentage neutralisation
tage neutralisation
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
49/69
Figure 53 Tch neutralisation, Antibody s and pairs, Varying toxin dose (straddling)
Tch strain VPl 10463 (LD75)
percentage neutralisation
Tch strain VPl 10463 (LD86)
percentage neutralisation
Tch strain VP]. 10463 (LD90)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
50/69
Figure 54 Tch neutralisation, Antibody s and pairs, Varying toxin dose (straddling)
Tch strain VPI 10463 (LD75)
percentage neutralisation
Tch strain VPI 10463 (LD86)
percentage neutralisation
Tch strain VPI 10463 (LDQO)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
51/69
Figure 55 Tch neutralisation, Antibody singles and pairs, Varying toxin dose (straddling)
Tch strain VPI 10463 (LD75)
percentage neutralisation
tage neutralisation
Tch strain VP! 10463 (LD90)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
52/69
Figure 56 Tch neutralisation, Antibody singles and pairs, g toxin dose (straddling)
Tch strain VPI 10463 (LD75)
percentage neutralisation
Tch strain VPI 10463 (LD86)
percentage neutralisation
1125.2 + 1153.08 n0/ml
Tch strain VPI 10463 (LDQO)
percentage neutraiisation
SUBSTITUTE SH EET (RULE 26)
53/69
Figure 57 Tch lisation, Antibody singles and pairs, Varying toxin dose (straddling)
Tch strain VPI 10463 (LD75)
percentage neutralisation
Tch strain VPI 10463 (LD86)
percentage neutralisation
percentage neutralisation
SU BSTITUTE SHEET (RULE 26)
PCT/G32012/052222
54/69
Figure 58 Tch neutralisation, Antibody singles and pairs, Varying toxin dose (straddling)
Tch strain VPI 10463 (LD75)
percentage neutralisation
.4 25:75 no/ml
Tch strain VPI 10463 (L086)
percentage lisation
100
02 + 1151.4 25:75 no/mi
Tch strain VPI 10463 (LDQO)
percentage neutralisation
SUBSTITUTE SHEET (RULE 26)
WO 38156
55/69
Figure 59 Tch neutralisation, Antibody singles and pairs, Varying toxin dose (straddling)
Tch strain VP! 10463 (LD75)
percentage neutralisation
Tch strain VPI 10463 (LD86)
percentage neutralisation
Tch strain VPI 10463 (LD90)
percentage neutralisation
SU BSTITUTE SHEET (RU LE 26)
56/69
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201161535532P | 2011-09-16 | 2011-09-16 | |
| US61/535,532 | 2011-09-16 | ||
| US201261638731P | 2012-04-26 | 2012-04-26 | |
| US61/638,731 | 2012-04-26 | ||
| PCT/GB2012/052222 WO2013038156A1 (en) | 2011-09-16 | 2012-09-10 | Neutralising antibodies to the major exotoxins tcda and tcdb of clostridium difficile |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| NZ623293A NZ623293A (en) | 2016-05-27 |
| NZ623293B2 true NZ623293B2 (en) | 2016-08-30 |
Family
ID=
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