NO20011362D0 - Algoritme for hurtige og sensitive databasesøk - Google Patents
Algoritme for hurtige og sensitive databasesøkInfo
- Publication number
- NO20011362D0 NO20011362D0 NO20011362A NO20011362A NO20011362D0 NO 20011362 D0 NO20011362 D0 NO 20011362D0 NO 20011362 A NO20011362 A NO 20011362A NO 20011362 A NO20011362 A NO 20011362A NO 20011362 D0 NO20011362 D0 NO 20011362D0
- Authority
- NO
- Norway
- Prior art keywords
- algorithm
- fast
- database searches
- sensitive database
- sensitive
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
Landscapes
- Physics & Mathematics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Biotechnology (AREA)
- Evolutionary Biology (AREA)
- General Health & Medical Sciences (AREA)
- Medical Informatics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Theoretical Computer Science (AREA)
- Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
Priority Applications (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
NO20011362A NO20011362D0 (no) | 2001-03-16 | 2001-03-16 | Algoritme for hurtige og sensitive databasesøk |
PCT/NO2002/000041 WO2002075636A1 (en) | 2001-03-16 | 2002-01-31 | Parallel biological sequence alignments |
EP02711564A EP1410303A1 (en) | 2001-03-16 | 2002-01-31 | Parallel biological sequence alignments |
US10/471,897 US20040098203A1 (en) | 2001-03-16 | 2002-01-31 | Parallel biological sequence alignments |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
NO20011362A NO20011362D0 (no) | 2001-03-16 | 2001-03-16 | Algoritme for hurtige og sensitive databasesøk |
Publications (1)
Publication Number | Publication Date |
---|---|
NO20011362D0 true NO20011362D0 (no) | 2001-03-16 |
Family
ID=19912266
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
NO20011362A NO20011362D0 (no) | 2001-03-16 | 2001-03-16 | Algoritme for hurtige og sensitive databasesøk |
Country Status (4)
Country | Link |
---|---|
US (1) | US20040098203A1 (no) |
EP (1) | EP1410303A1 (no) |
NO (1) | NO20011362D0 (no) |
WO (1) | WO2002075636A1 (no) |
Families Citing this family (15)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20060036374A1 (en) * | 2000-07-12 | 2006-02-16 | Debe Derek A | Method for determining three-dimensional protein structure from primary protein sequence |
US7343249B2 (en) | 2005-03-23 | 2008-03-11 | International Business Machines Corporational | Vectorization of sequence alignment computation using distance matrix reshaping |
US20070038381A1 (en) * | 2005-08-09 | 2007-02-15 | Melchior Timothy A | Efficient method for alignment of a polypeptide query against a collection of polypeptide subjects |
US20080250016A1 (en) * | 2007-04-04 | 2008-10-09 | Michael Steven Farrar | Optimized smith-waterman search |
US9201916B2 (en) * | 2012-06-13 | 2015-12-01 | Infosys Limited | Method, system, and computer-readable medium for providing a scalable bio-informatics sequence search on cloud |
US10691775B2 (en) | 2013-01-17 | 2020-06-23 | Edico Genome, Corp. | Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform |
US10068054B2 (en) | 2013-01-17 | 2018-09-04 | Edico Genome, Corp. | Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform |
US9679104B2 (en) | 2013-01-17 | 2017-06-13 | Edico Genome, Corp. | Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform |
US9792405B2 (en) | 2013-01-17 | 2017-10-17 | Edico Genome, Corp. | Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform |
US10847251B2 (en) | 2013-01-17 | 2020-11-24 | Illumina, Inc. | Genomic infrastructure for on-site or cloud-based DNA and RNA processing and analysis |
EP3329491A2 (en) | 2015-03-23 | 2018-06-06 | Edico Genome Corporation | Method and system for genomic visualization |
US10068183B1 (en) | 2017-02-23 | 2018-09-04 | Edico Genome, Corp. | Bioinformatics systems, apparatuses, and methods executed on a quantum processing platform |
US20170270245A1 (en) | 2016-01-11 | 2017-09-21 | Edico Genome, Corp. | Bioinformatics systems, apparatuses, and methods for performing secondary and/or tertiary processing |
US10417229B2 (en) | 2017-06-27 | 2019-09-17 | Sap Se | Dynamic diagonal search in databases |
US11822541B2 (en) * | 2021-09-30 | 2023-11-21 | Nvidia Corporation | Techniques for storing sub-alignment data when accelerating Smith-Waterman sequence alignments |
Family Cites Families (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5168499A (en) * | 1990-05-02 | 1992-12-01 | California Institute Of Technology | Fault detection and bypass in a sequence information signal processor |
US5701256A (en) * | 1995-05-31 | 1997-12-23 | Cold Spring Harbor Laboratory | Method and apparatus for biological sequence comparison |
-
2001
- 2001-03-16 NO NO20011362A patent/NO20011362D0/no unknown
-
2002
- 2002-01-31 EP EP02711564A patent/EP1410303A1/en not_active Withdrawn
- 2002-01-31 WO PCT/NO2002/000041 patent/WO2002075636A1/en not_active Application Discontinuation
- 2002-01-31 US US10/471,897 patent/US20040098203A1/en not_active Abandoned
Also Published As
Publication number | Publication date |
---|---|
US20040098203A1 (en) | 2004-05-20 |
EP1410303A1 (en) | 2004-04-21 |
WO2002075636A1 (en) | 2002-09-26 |
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