MX2022005956A - Metodos y sistemas para determinar parentesco ancestral. - Google Patents

Metodos y sistemas para determinar parentesco ancestral.

Info

Publication number
MX2022005956A
MX2022005956A MX2022005956A MX2022005956A MX2022005956A MX 2022005956 A MX2022005956 A MX 2022005956A MX 2022005956 A MX2022005956 A MX 2022005956A MX 2022005956 A MX2022005956 A MX 2022005956A MX 2022005956 A MX2022005956 A MX 2022005956A
Authority
MX
Mexico
Prior art keywords
individuals
segments
matched
degree
genetic markers
Prior art date
Application number
MX2022005956A
Other languages
English (en)
Inventor
Aaron J Sams
Samuel H Vohr
Adam S Gardner
Matt Barton
Ryan Boyko
Adam R Boyko
Original Assignee
Embark Veterinary Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Embark Veterinary Inc filed Critical Embark Veterinary Inc
Publication of MX2022005956A publication Critical patent/MX2022005956A/es

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Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40Population genetics; Linkage disequilibrium
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10Sequence alignment; Homology search
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B10/00ICT specially adapted for evolutionary bioinformatics, e.g. phylogenetic tree construction or analysis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Biotechnology (AREA)
  • Medical Informatics (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Evolutionary Biology (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Physiology (AREA)
  • Ecology (AREA)
  • Animal Behavior & Ethology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Ignition Installations For Internal Combustion Engines (AREA)
  • Structure Of Transmissions (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)

Abstract

La presente divulgación proporciona métodos para estimar un grado de relación ancestral entre individuos. En un aspecto, un método comprende recibir datos de haplotipo que comprenden marcadores genéticos compartidos entre una población de individuos; dividir los datos de haplotipo en segmentos con base en los marcadores genéticos; para cada una de la población de individuos de prueba: (i) con base en los marcadores genéticos, hacer coincidir segmentos de los datos de haplotipo que son idénticos por descendencia entre dos individuos, (ii) para cada uno de los segmentos coincidentes: dividir el segmento coincidente en intervalos genómicos discretos, puntuar cada uno de los intervalos genómicos discretos con base en un grado de coincidencia dentro o entre los individuos, corregir las puntuaciones para consistencia, y (iii) calcular una suma ponderada sobre los intervalos genómicos discretos del segmento coincidente, con base en las puntuaciones corregidas y factores de ponderación asignados; y (d) estimar el grado de relación ancestral entre los individuos con base en las sumas ponderadas de los segmentos coincidentes.
MX2022005956A 2019-11-18 2020-11-17 Metodos y sistemas para determinar parentesco ancestral. MX2022005956A (es)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201962936879P 2019-11-18 2019-11-18
PCT/US2020/060899 WO2021101896A1 (en) 2019-11-18 2020-11-17 Methods and systems for determining ancestral relatedness

Publications (1)

Publication Number Publication Date
MX2022005956A true MX2022005956A (es) 2022-09-07

Family

ID=75980898

Family Applications (1)

Application Number Title Priority Date Filing Date
MX2022005956A MX2022005956A (es) 2019-11-18 2020-11-17 Metodos y sistemas para determinar parentesco ancestral.

Country Status (12)

Country Link
US (2) US11501851B2 (es)
EP (1) EP4062411A4 (es)
JP (1) JP2023501006A (es)
KR (1) KR20220115952A (es)
CN (1) CN115004304A (es)
AU (1) AU2020388555A1 (es)
BR (1) BR112022009494A2 (es)
CA (1) CA3162092A1 (es)
GB (1) GB2608502A (es)
IL (1) IL292997A (es)
MX (1) MX2022005956A (es)
WO (1) WO2021101896A1 (es)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20230131539A1 (en) * 2021-10-27 2023-04-27 Mars, Incorporated Systems and methods for a pet relative finder

Family Cites Families (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE1233366T1 (de) * 1999-06-25 2003-03-20 Genaissance Pharmaceuticals Verfahren zur herstellung und verwendung von Haplotype Daten
JP2003523176A (ja) 1999-10-15 2003-08-05 ダブリュー. ジーン ドッヅ, 動物健康診断
US6730023B1 (en) 1999-10-15 2004-05-04 Hemopet Animal genetic and health profile database management
US7548839B2 (en) 1999-10-15 2009-06-16 Hemopet System for animal health diagnosis
WO2003014143A2 (en) * 2001-08-04 2003-02-20 Whitehead Institute For Biomedical Research Haplotype map of the human genome and uses therefor
US20060147962A1 (en) 2003-06-16 2006-07-06 Mars, Inc. Genotype test
CA2543785A1 (en) 2003-10-24 2005-05-06 Mmi Genomics, Inc. Compositions, methods, and systems for inferring canine breeds for genetic traits and verifying parentage of canine animals
JP2007518403A (ja) * 2003-12-17 2007-07-12 フレッド ハッチンソン キャンサー リサーチ センター イヌ科動物血統の同定のための方法および材料
US20060045909A1 (en) 2004-08-30 2006-03-02 Colgate-Palmolive Company Genome-based diet design
US20060200320A1 (en) 2005-03-02 2006-09-07 Hill's Pet Nutrition, Inc. Methods and systems for designing animal food compositions
EP1798295A1 (en) 2005-12-14 2007-06-20 Gregory M Acland Method for identifying progressive rod-cone degeneration in dogs
WO2009035792A1 (en) 2007-08-03 2009-03-19 Melba Ketchum Compositions, methods and systems for the simultaneous determination of parentage, identity, sex, genotype and/or phenotype and breed determination in animals
GB0722068D0 (en) 2007-11-09 2007-12-19 Mars Inc Predictive test
WO2009108918A2 (en) * 2008-02-29 2009-09-03 John Boyce Methods and systems for social networking based on nucleic acid sequences
WO2009134226A1 (en) * 2008-05-01 2009-11-05 The Board Of Trustees Of The Leland Stanford Junior University Canine coat color prediction
US8463554B2 (en) * 2008-12-31 2013-06-11 23Andme, Inc. Finding relatives in a database
US20150344959A1 (en) 2013-01-14 2015-12-03 Cornell University Compositions and methods for genotyping canines
EP3621080B1 (en) * 2014-10-14 2023-09-06 Ancestry.com DNA, LLC Reducing error in predicted genetic relationships

Also Published As

Publication number Publication date
WO2021101896A1 (en) 2021-05-27
CA3162092A1 (en) 2021-05-27
EP4062411A4 (en) 2023-12-20
GB202207365D0 (en) 2022-07-06
AU2020388555A1 (en) 2022-06-02
BR112022009494A2 (pt) 2022-09-20
CN115004304A (zh) 2022-09-02
EP4062411A1 (en) 2022-09-28
US20230061512A1 (en) 2023-03-02
US20220122693A1 (en) 2022-04-21
JP2023501006A (ja) 2023-01-17
US11501851B2 (en) 2022-11-15
KR20220115952A (ko) 2022-08-19
GB2608502A (en) 2023-01-04
IL292997A (en) 2022-07-01

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