KR20220068111A - Composition for preventing or treating SARS-CoV-2 infection - Google Patents
Composition for preventing or treating SARS-CoV-2 infection Download PDFInfo
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- KR20220068111A KR20220068111A KR1020210052828A KR20210052828A KR20220068111A KR 20220068111 A KR20220068111 A KR 20220068111A KR 1020210052828 A KR1020210052828 A KR 1020210052828A KR 20210052828 A KR20210052828 A KR 20210052828A KR 20220068111 A KR20220068111 A KR 20220068111A
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Abstract
Description
본 발명은 SARS-CoV-2 감염증에 대한 예방 또는 치료용 조성물에 관한 것이다.The present invention relates to a composition for preventing or treating SARS-CoV-2 infection.
SARS-CoV-2(Severe acute respiratory syndrome coronavirus 2)는 2019년에 처음 알려진 급성 중증 호흡기 질환 코로나바이러스 2로써 양성 방향의 단일 사슬 RNA 바이러스(positive-sense single-stranded RNA virus)로 분류된다. 이 바이러스에 의해 감염된 질환을 코로나바이러스감염증-19(Coronavirus disease 2019)로 명명하였으며, 줄여서 COVID-19라고 부르고 있다. 세계보건기구(World Health Organization, WHO)에서는 코로나바이러스 대유행(Coronavirus pandemic)을 공식 발표하였으며, 2021년 4월 현재 대한민국의 감염자수는 11만명에 육박하고 있으며, 전세계 약 1억3천명이 감염된것으로 조사되고 있으며, 계속 확산되고 있는 추세이다.SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2) is an acute severe
SARS-CoV-2는 단일 가닥 (+) 감지 RNA 바이러스로, 바이러스 (+) 감지 RNA 게놈은 주로 숙주 세포에서 mRNA로 사용되어 두 개의 다단백질로 구성된 큰 replicase를 번역한다. Replicase는 RNA를 복제하기 위한 주형으로 RNA 게놈을 사용한다. 바이러스 프로테아제인 PLpro 및 3CLpro는 다단백질을 15-16 개의 비구조 단백질로 분해한다. 비 구조적 단백질은 전체 게놈 및 서브 게놈 mRNA 복제를 매개하여 구조적 및 비구조적 단백질을 암호화한다.SARS-CoV-2 is a single-stranded (+) sensing RNA virus, in which the viral (+) sensing RNA genome is mainly used as mRNA in host cells to translate a large replicase composed of two polyproteins. Replicase uses the RNA genome as a template for replicating RNA. The viral proteases PLpro and 3CLpro break down polyproteins into 15-16 nonstructural proteins. Nonstructural proteins encode structural and nonstructural proteins by mediating whole genome and subgenomic mRNA replication.
16개의 비구조 단백질 중 Nsp15는 촉매 C- 말단 도메인에 EndoU(uridylate-specific endoribonuclease)를 포함한다. 바이러스성 EndoU는 Nidovirales에서만 발견되었기 때문에 NendoU(nidovirus EndoU)로 명명되었다. SARS-CoV-2의 Nsp15 결정구조는 고해상도로 규명되었다. Nsp15는 N- 말단 올리고머화 도메인, 중간 도메인, 및 C- 말단 촉매 도메인의 3 가지 도메인으로 구성된다. Nsp15의 결정 구조는 2 개의 삼량체를 포함하는 육량체 조립을 보여주었다.Among the 16 nonstructural proteins, Nsp15 contains a uridylate-specific endoribonuclease (EndoU) in its catalytic C-terminal domain. Since the viral EndoU was found only in Nidovirales, it was named NendoU (nidovirus EndoU). The Nsp15 crystal structure of SARS-CoV-2 was identified with high resolution. Nsp15 is composed of three domains: an N-terminal oligomerization domain, an intermediate domain, and a C-terminal catalytic domain. The crystal structure of Nsp15 showed a hexameric assembly comprising two trimers.
NendoU는 단일 가닥 및 이중 가닥 RNA의 우리딘 부위에서 포스포디에스테르결합을 가수분해하고, 2',3'-cyclic phosphodiester 및 5'-hydroxyl termini를 생성한다. 숙주의 선천적인 면역 시스템은 패턴 인식 수용체 MDA5를 사용하여 polyA- 바이러스 RNA에서 복제된 (-) 센스 바이러스 RNA에서 polyU 서열을 인식한다. Nsp15는 자체 (-) 센스 RNA를 절단하여 세포에서 polyU 서열의 축적을 제한함으로써 숙주의 면역 반응을 회피한다. 또한 Nsp15는 바이러스 게놈을 처리해 코로나바이러스의 복제에 필수적인 역할을 가진다. Nsp15을 제거할 경우 바이러스의 복제가 크게 감소하였다. 따라서 Nsp15 활성의 억제는 바이러스 게놈의 복제를 막고 숙주의 선천적 면역 반응을 활성화시킴으로써 무증상 단계의 바이러스 감염을 예방 및 제어하는 수단이 될 수 있다.NendoU hydrolyzes phosphodiester bonds at the uridine sites of single-stranded and double-stranded RNA to generate 2',3'-cyclic phosphodiester and 5'-hydroxyl termini. The host's innate immune system uses the pattern recognition receptor MDA5 to recognize polyU sequences from (-) sense viral RNA copied from polyA-viral RNA. Nsp15 evades the host's immune response by cleaving its own (-) sense RNA, limiting the accumulation of polyU sequences in cells. Nsp15 also has an essential role in the replication of coronaviruses by processing the viral genome. When Nsp15 was removed, viral replication was greatly reduced. Therefore, inhibition of Nsp15 activity could be a means of preventing and controlling viral infection in the asymptomatic stage by blocking the replication of the viral genome and activating the innate immune response of the host.
상기와 같은 문제점을 해결하기 위해, 본 발명의 목적은 SARS-CoV-2 감염증에 대한 예방 또는 치료용 제제를 제공하기 위해, SARS-CoV-2의 Nsp15에 대한 억제 활성을 나타내는 천연 화합물인 EGCG(epigallocatechin gallate), 바이칼린(baicalin) 또는 퀘르세틴(quercetin)를 포함하는 조성물을 SARS-CoV-2 감염증에 대한 항바이러스 성분으로 제공하는 것이다.In order to solve the above problems, an object of the present invention is to provide a preventive or therapeutic agent for SARS-CoV-2 infection, a natural compound EGCG ( Epigallocatechin gallate), to provide a composition containing baicalin (baicalin) or quercetin (quercetin) as an antiviral component for SARS-CoV-2 infection.
본 발명은 Nsp15 억제제를 유효성분으로 포함하는 SARS-CoV-2 감염증에 대한 예방 또는 치료용 약학적 조성물을 제공한다.The present invention provides a pharmaceutical composition for preventing or treating SARS-CoV-2 infection comprising an Nsp15 inhibitor as an active ingredient.
또한, 본 발명은 Nsp15 억제제를 유효성분으로 포함하는 SARS-CoV-2 감염증에 대한 예방 또는 개선용 건강식품 조성물을 제공한다.In addition, the present invention provides a health food composition for preventing or improving SARS-CoV-2 infection comprising an Nsp15 inhibitor as an active ingredient.
본 발명에 따르면, SARS-CoV-2의 Nsp15에 대한 억제 활성을 나타내는 천연 화합물로 EGCG(epigallocatechin gallate), 바이칼린(baicalin) 또는 퀘르세틴(quercetin)을 스크리닝하고, EGCG(epigallocatechin gallate), 바이칼린(baicalin) 또는 퀘르세틴(quercetin)의 항 바이러스 효과를 확인함 으로써, EGCG(epigallocatechin gallate), 바이칼린(baicalin) 또는 퀘르세틴(quercetin)를 SARS-CoV-2 감염증에 대한 항바이러스제로 제공될 수 있다.According to the present invention, EGCG (epigallocatechin gallate), baicalin or quercetin is screened as a natural compound showing the inhibitory activity of SARS-CoV-2 on Nsp15, and EGCG (epigallocatechin gallate), baicalin ( By confirming the antiviral effect of baicalin) or quercetin, epigallocatechin gallate (EGCG), baicalin or quercetin can be provided as antiviral agents for SARS-CoV-2 infection.
도 1은 SARS-CoV-2의 Nsp15 억제제를 스크리닝 하기 위한 천연 화합물의 목록이다.
도 2는 SARS-CoV-2의 Nsp15 억제제를 스크리닝 하기 위한 천연 화합물의 스크리링 결과이다. y축은 반응 60분 후 계산된 상대적 효소 활성(반응 속도)이고, x 축은 도 1의 천연 화합물의 목록이다.
도 3은 SARS-CoV-2의 Nsp15 억제제로 스크리닝 된 EGCG(epigallocatechin gallate), 바이칼린(baicalin) 및 퀘르세틴(quercetin)의 분자 구조이다.
도 4는 바이칼린(baicalin)과 SARS-CoV-2의 Nsp15 효소를 전배양하여 효소 활성을 분석한 결과이다. y 축은 상대 형광 단위(RFU)를 나타내고, x 축은 반응 시간을 나타낸다.
도 5는 녹차 추출물, EGCG, 바이칼린(baicalin), 및 퀘르세틴(quercetin)의 Nsp15 억제 효과를 분석한 결과이다. y 축은 반응 60분 후 계산된 억제율을 나타내고, x 축은 각 화합물의 농도를 나타낸다.
도 6은 in vitro에서 SARS-CoV-2 균주에 대한 녹차 추출물, EGCG, 바이칼린(baicalin)의 항 바이러스 효과를 평가한 결과이다. y 축은 중화 퍼센트를 나타내고, x 축은 농도를 나타낸다.
도 7은 SARS-CoV-2의 Nsp15와 EGCG의 리간드 도킹 모델을 나타내는 그림이다. SARS-CoV-2의 Nsp15 결정 구조 (PDB : 6VWW)는 파랑색으로 표시되고, EGCG는 주황색으로 표시되었다.
도 8은 Nsp15의 활성 부위 있는 Nsp15 (파란색 막대)와 EGCG (주황색 막대)사이의 상호 작용을 나타내는 그림이다. 회색 점선은 소수성 상호 작용을 나타내고, 파란색 직선은 수소 결합을 나타내고, 노란색 점선은 염 다리를 나타낸다.1 is a list of natural compounds for screening Nsp15 inhibitors of SARS-CoV-2.
2 is a screening result of a natural compound for screening an Nsp15 inhibitor of SARS-CoV-2. The y-axis is the calculated relative enzyme activity (reaction rate) after 60 minutes of reaction, and the x-axis is a list of natural compounds in FIG. 1 .
3 is a molecular structure of epigallocatechin gallate (EGCG), baicalin and quercetin screened with an Nsp15 inhibitor of SARS-CoV-2.
Figure 4 is a result of analyzing the enzyme activity by pre-culturing the Nsp15 enzyme of baicalin (baicalin) and SARS-CoV-2. The y-axis represents relative fluorescence units (RFU), and the x-axis represents reaction time.
5 is a result of analyzing the Nsp15 inhibitory effect of green tea extract, EGCG, baicalin, and quercetin. The y-axis shows the calculated inhibition rate after 60 minutes of reaction, and the x-axis shows the concentration of each compound.
6 is a result of evaluating the antiviral effect of green tea extract, EGCG, and baicalin on the SARS-CoV-2 strain in vitro . The y-axis represents percent neutralization, and the x-axis represents concentration.
7 is a diagram illustrating a ligand docking model of Nsp15 and EGCG of SARS-CoV-2. The Nsp15 crystal structure of SARS-CoV-2 (PDB: 6VWW) is shown in blue, and EGCG is shown in orange.
8 is a diagram showing the interaction between Nsp15 (blue bar) and EGCG (orange bar), which have an active site of Nsp15. The gray dotted line represents the hydrophobic interaction, the blue straight line represents the hydrogen bonding, and the yellow dotted line represents the salt bridge.
본 명세서에서 사용되는 용어는 본 발명에서의 기능을 고려하면서 가능한 현재 널리 사용되는 일반적인 용어들을 선택하였으나, 이는 당 분야에 종사하는 기술자의 의도 또는 판례, 새로운 기술의 출현 등에 따라 달라질 수 있다. 또한, 특정한 경우는 출원인이 임의로 선정한 용어도 있으며, 이 경우 해당되는 발명의 설명 부분에서 상세히 그 의미를 기재할 것이다. 따라서 본 발명에서 사용되는 용어는 단순한 용어의 명칭이 아닌, 그 용어가 가지는 의미와 본 발명의 전반에 걸친 내용을 토대로 정의되어야 한다.The terms used in this specification have been selected as currently widely used general terms as possible while considering the functions in the present invention, but these may vary depending on the intention or precedent of a person skilled in the art, the emergence of new technology, and the like. In addition, in a specific case, there is a term arbitrarily selected by the applicant, and in this case, the meaning will be described in detail in the description of the corresponding invention. Therefore, the term used in the present invention should be defined based on the meaning of the term and the overall content of the present invention, rather than the name of a simple term.
다르게 정의되지 않는 한, 기술적이거나 과학적인 용어를 포함해서 여기서 사용되는 모든 용어들은 본 발명이 속하는 기술 분야에서 통상의 지식을 가진 자에 의해 일반적으로 이해되는 것과 동일한 의미를 가지고 있다. 일반적으로 사용되는 사전에 정의되어 있는 것과 같은 용어들은 관련 기술의 문맥상 가지는 의미와 일치하는 의미를 가지는 것으로 해석되어야 하며, 본 출원에서 명백하게 정의하지 않는 한, 이상적이거나 과도하게 형식적인 의미로 해석되지 않는다.Unless defined otherwise, all terms used herein, including technical or scientific terms, have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. Terms such as those defined in a commonly used dictionary should be interpreted as having a meaning consistent with the meaning in the context of the related art, and should not be interpreted in an ideal or excessively formal meaning unless explicitly defined in the present application. does not
수치 범위는 상기 범위에 정의된 수치를 포함한다. 본 명세서에 걸쳐 주어진 모든 최대의 수치 제한은 낮은 수치 제한이 명확히 쓰여 있는 것처럼 모든 더 낮은 수치 제한을 포함한다. 본 명세서에 걸쳐 주어진 모든 최소의 수치 제한은 더 높은 수치 제한이 명확히 쓰여 있는 것처럼 모든 더 높은 수치 제한을 포함한다. 본 명세서에 걸쳐 주어진 모든 수치 제한은 더 좁은 수치 제한이 명확히 쓰여 있는 것처럼, 더 넓은 수치 범위 내의 더 좋은 모든 수치 범위를 포함할 것이다.Numerical ranges are inclusive of the values defined in that range. Every maximum numerical limitation given throughout this specification includes all lower numerical limitations as if the lower numerical limitation were expressly written. Every minimum numerical limitation given throughout this specification includes all higher numerical limitations as if the higher numerical limitation were expressly written. All numerical limitations given throughout this specification shall include all numerical ranges that are better within the broader numerical limits, as if the narrower numerical limitations were expressly written.
이하, 본 발명을 보다 상세하게 설명한다.Hereinafter, the present invention will be described in more detail.
본 발명은 Nsp15 억제제를 유효성분으로 포함하는 SARS-CoV-2 감염증에 대한 예방 또는 치료용 약학적 조성물을 제공한다.The present invention provides a pharmaceutical composition for preventing or treating SARS-CoV-2 infection comprising an Nsp15 inhibitor as an active ingredient.
상기 Nsp15 억제제는 EGCG(epigallocatechin gallate), 바이칼린(baicalin) 또는 퀘르세틴(quercetin)이다.The Nsp15 inhibitor is epigallocatechin gallate (EGCG), baicalin or quercetin.
상기 Nsp15는 SARS-CoV-2 바이러스의 복제 과정에서 활성화되는 엔도리보뉴클레아제(endoribonuclease)의 일종이다.The Nsp15 is a kind of endoribonuclease activated in the replication process of SARS-CoV-2 virus.
상기 EGCG(epigallocatechin gallate)는 에피갈로카테킨-3-갈레이트(epigallocatechin-3-gallate)라고도 알려져 있으며, 에피갈로카테킨과 갈레이트가 에스터 결합으로 이루어져 있는 구조이다. 녹차의 떫은 맛을 내는 폴리페놀의 일종인 카테킨류의 물질로 사과 껍질, 자두, 양파, 헤이즐넛이나 피칸에도 에피갈로카테킨 갈레이트 성분이 포함되어 있다. 상기 EGCG(epigallocatechin gallate)는 하기 화학식 1로 표시되는 화합물이며, Nsp15의 활성 부위에 결합할 수 있다.The epigallocatechin gallate (EGCG), also known as epigallocatechin-3-gallate, has a structure in which epigallocatechin and gallate are formed by an ester bond. It is a substance of catechins, a kind of polyphenol that gives green tea's astringent taste. Apple peels, plums, onions, hazelnuts, and pecans also contain epigallocatechin gallate. The EGCG (epigallocatechin gallate) is a compound represented by the following Chemical Formula 1, and may bind to the active site of Nsp15.
[화학식 1][Formula 1]
상기 바이칼린(baicalin)은 황금 등에 함유되어 있는 플라보노이드 계열의 화합물이며, 하기 화학식 2로 표시되는 화합물이다.The baicalin (baicalin) is a compound of the flavonoid series contained in gold and the like, and is a compound represented by the following formula (2).
[화학식 2][Formula 2]
상기 퀘르세틴(quercetin)은 하기 화학식 3으로 표시되는 화합물이다.The quercetin (quercetin) is a compound represented by the following formula (3).
[화학식 3][Formula 3]
본 발명의 약학적 조성물은 당해 발명이 속하는 기술분야에서 통상의 지식을 가진 자가 용이하게 실시할 수 있는 방법에 따라, 약제학적으로 허용되는 담체를 이용하여 제제화함으로써 단위 용량 형태로 제조되거나 또는 다용량 용기 내에 내입시켜 제조될 수 있다.The pharmaceutical composition of the present invention is prepared in unit dose form or multi-dose by formulating using a pharmaceutically acceptable carrier according to a method that can be easily carried out by a person of ordinary skill in the art to which the present invention pertains. It can be prepared by introducing into a container.
상기 약제학적으로 허용되는 담체는 제제시에 통상적으로 이용되는 것으로서, 락토스, 덱스트로스, 수크로스, 솔비톨, 만니톨, 전분, 아카시아 고무, 인산 칼슘, 알기네이트, 젤라틴, 규산 칼슘, 미세결정성 셀룰로스, 폴리비닐피롤리돈, 셀룰로스, 물, 시럽, 메틸 셀룰로스, 메틸 히드록시벤조에이트, 프로필히드록시벤조에이트, 활석, 스테아르산 마그네슘 및 미네랄 오일 등을 포함하나, 이에 한정되는 것은 아니다. 본 발명의 약학적 조성물은 상기 성분들 이외에 윤활제, 습윤제, 감미제, 향미제, 유화제, 현탁제, 보존제 등을 추가로 포함할 수 있다.The pharmaceutically acceptable carriers are those commonly used in formulation, and include lactose, dextrose, sucrose, sorbitol, mannitol, starch, acacia gum, calcium phosphate, alginate, gelatin, calcium silicate, microcrystalline cellulose, polyvinylpyrrolidone, cellulose, water, syrup, methyl cellulose, methyl hydroxybenzoate, propylhydroxybenzoate, talc, magnesium stearate and mineral oil, and the like. The pharmaceutical composition of the present invention may further include a lubricant, a wetting agent, a sweetening agent, a flavoring agent, an emulsifying agent, a suspending agent, a preservative, and the like, in addition to the above components.
본 발명에 있어서, 상기 약학적 조성물에 포함되는 첨가제의 함량은 특별히 한정되는 것은 아니며 통상의 제제화에 사용되는 함량 범위 내에서 적절하게 조절될 수 있다.In the present invention, the content of the additive included in the pharmaceutical composition is not particularly limited and may be appropriately adjusted within the content range used for conventional formulation.
상기 약학적 조성물은 수용액, 현탁액, 유탁액 등과 같은 주사용 제형, 환약, 캡슐, 과립, 정제, 크림, 젤, 패취, 분무제, 연고제, 경고제, 로션제, 리니멘트제, 파스타제 및 카타플라스마제로 이루어진 군으로부터 선택되는 하나 이상의 외용제 형태로 제형화될 수 있다.The pharmaceutical composition is an aqueous solution, a suspension, an injectable formulation such as an emulsion, a pill, a capsule, a granule, a tablet, a cream, a gel, a patch, a spray, an ointment, a warning agent, a lotion, a liniment agent, a pasta agent, and a cataplasma It may be formulated in the form of one or more external preparations selected from the group consisting of agents.
본 발명의 약학적 조성물은 제형화를 위해 추가로 있는 약학적으로 허용가능한 담체 및 희석제를 포함할 수 있다. 상기 약학적으로 허용가능한 담체 및 희석제는 전분, 당, 및 만니톨과 같은 부형제, 칼슘 포스페이트 등과 같은 충전제 및 증량제, 카르복시메틸셀룰로오스, 히드록시프로필셀룰로오스 등과 같은 셀룰로오스 유도체, 젤라틴, 알긴산염, 및 폴리비닐 피롤리돈 등과 같은 결합제, 활석, 스테아린산 칼슘, 수소화 피마자유 및 폴리에틸렌 글리콜과 같은 윤활제, 포비돈, 크로스포비돈과 같은 붕해제, 폴리소르베이트, 세틸알코올, 및 글리세롤 등과 같은 계면활성제를 포함하나, 이에 한정되지 않는다. 상기 약학적으로 허용가능한 담체 및 희석제는 대상체에게 생물학적 및 생리학적으로 친화적인 것일 수 있다. 희석제의 예로는 염수, 수용성 완충액, 용매 및/또는 분산제(dispersion media)를 들 수 있으나, 이에 제한되는 것은 아니다.The pharmaceutical composition of the present invention may further include a pharmaceutically acceptable carrier and diluent for formulation. The pharmaceutically acceptable carriers and diluents include starch, sugar, and excipients such as mannitol, fillers and extenders such as calcium phosphate, cellulose derivatives such as carboxymethyl cellulose, hydroxypropyl cellulose, gelatin, alginate, and polyvinyl blood binders such as rolidone, lubricants such as talc, calcium stearate, hydrogenated castor oil and polyethylene glycol, disintegrants such as povidone and crospovidone, surfactants such as polysorbates, cetyl alcohol, and glycerol does not The pharmaceutically acceptable carrier and diluent may be biologically and physiologically compatible with the subject. Examples of diluents include, but are not limited to, saline, aqueous buffers, solvents, and/or dispersion media.
본 발명의 약학적 조성물은 목적하는 방법에 따라 경구 투여하거나 비경구 투여(예를 들어, 정맥 내, 피하, 복강 내 또는 국소에 적용)할 수 있다. 경구 투여일 경우, 정제, 트로키제 (troches), 로젠지 (lozenge), 수용성 현탁액, 유성 현탁액, 조제 분말, 과립, 에멀젼, 하드 캡슐, 소프트 캡슐, 시럽 또는 엘릭시르제 등으로 제형화될 수 있다. 비경구 투여일 경우, 주사액, 좌제, 호흡기 흡입용 분말, 스프레이용 에어로졸제, 연고, 도포용 파우더, 오일, 크림 등으로 제형화 될 수 있다.The pharmaceutical composition of the present invention may be administered orally or parenterally (eg, intravenously, subcutaneously, intraperitoneally or topically) according to a desired method. For oral administration, it may be formulated as tablets, troches, lozenges, aqueous suspensions, oily suspensions, prepared powders, granules, emulsions, hard capsules, soft capsules, syrups or elixirs, and the like. In the case of parenteral administration, it may be formulated as an injection, suppository, powder for respiratory inhalation, aerosol for spray, ointment, powder for application, oil, cream, etc.
본 발명의 약학적 조성물의 투여량은 환자의 상태 및 체중, 연령, 성별, 건강상태, 식이 체질 특이성, 제제의 성질, 질병의 정도, 조성물의 투여시간, 투여방법, 투여기간 또는 간격, 배설율, 및 약물 형태에 따라 그 범위가 다양할 수 있으며, 이 분야 통상의 기술자에 의해 적절하게 선택될 수 있다. 예컨대, 약 0.1 내지 10,000 mg/kg의 범위일 수 있으나 이제 제한되지 않으며, 하루 일회 내지 수회에 나누어 투여될 수 있다.The dosage of the pharmaceutical composition of the present invention depends on the patient's condition and weight, age, sex, health condition, dietary constitution specificity, the nature of the preparation, the degree of disease, the administration time of the composition, administration method, administration period or interval, excretion rate , and the range may vary depending on the drug form, and may be appropriately selected by those skilled in the art. For example, it may be in the range of about 0.1 to 10,000 mg/kg, but is not limited now, and may be administered in divided doses from once to several times a day.
상기 약학적 조성물은 목적하는 방법에 따라 경구 투여되거나 비경구 투여(예를 들면, 정맥 내, 피하 내, 복강 내 또는 국소에 적용)될 수 있다. 본 발명의 약학적 조성물의 약학적 유효량, 유효 투여량은 약학적 조성물의 제제화 방법, 투여 방식, 투여 시간 및/또는 투여 경로 등에 의해 다양해질 수 있으며, 당해 기술 분야에서 통상의 지식을 가진 자는 목적하는 치료에 효과적인 투여량을 용이하게 결정하고 처방할 수 있다. 본 발명의 약학적 조성물의 투여는 하루에 1회 투여될 수 있고, 수회에 나누어 투여될 수도 있다.The pharmaceutical composition may be administered orally or parenterally (eg, intravenously, subcutaneously, intraperitoneally or topically) according to a desired method. The pharmaceutically effective amount and effective dosage of the pharmaceutical composition of the present invention may vary depending on the formulation method, administration method, administration time and/or route of administration of the pharmaceutical composition, and those of ordinary skill in the art It is possible to easily determine and prescribe an effective dosage for treatment. Administration of the pharmaceutical composition of the present invention may be administered once a day, may be administered divided into several times.
또한, 본 발명은 Nsp15 억제제를 유효성분으로 포함하는 SARS-CoV-2 감염증에 대한 예방 또는 개선용 건강식품 조성물을 제공한다.In addition, the present invention provides a health food composition for preventing or improving SARS-CoV-2 infection comprising an Nsp15 inhibitor as an active ingredient.
본 발명은 통상적으로 이용되는 식품으로써 일반적으로 사용될 수 있다.The present invention can be generally used as a commonly used food product.
본 발명의 식품 조성물은 건강기능식품으로서 사용될 수 있다. 상기 "건강기능 식품"이라 함은 건강기능 식품에 관한 법률에 따른 인체에 유용한 기능성을 가진 원료나 성분을 사용하여 제조 및 가공한 식품을 의미하며, "기능성"이라 함은 인체의 구조 및 기능에 대하여 영양소를 조절하거나 생리학적 작용 등과 같은 보건 용도에 유용한 효과를 얻을 목적으로 섭취하는 것을 의미한다.The food composition of the present invention can be used as a health functional food. The term "health functional food" means a food manufactured and processed using raw materials or ingredients useful for the human body in accordance with the Health Functional Food Act, and "functionality" refers to the structure and function of the human body. It refers to ingestion for the purpose of obtaining useful effects for health purposes such as regulating nutrients or physiological effects.
본 발명의 식품 조성물은 통상의 식품 첨가물을 포함할 수 있으며, 상기 "식품 첨가물"로서의 적합 여부는 다른 규정이 없는 한, 식품의약품안전처에 승인된 식품 첨가물 공전의 총칙 및 일반시험법 등에 따라 해당 품목에 관한 규격 및 기준에 의하여 판정한다.The food composition of the present invention may contain conventional food additives, and the suitability as the "food additive" is determined according to the general rules and general test methods of food additives approved by the Ministry of Food and Drug Safety, unless otherwise specified. It is judged according to the standards and standards related to the item.
상기 "식품 첨가물 공전"에 수재된 품목으로는 예를 들어, 케톤류, 글리신, 구연산칼륨, 니코틴산, 계피산 등의 화학적 합성물, 감색소, 감초추출물, 결정셀룰로오스, 고량색소, 구아검 등의 천연첨가물, L-글루타민산나트륨 제제, 면류첨가알칼리제, 보존료제제, 타르색소제제 등의 혼합제제류들을 들 수 있다.The items listed in the "Food Additives Code" include, for example, chemical compounds such as ketones, glycine, potassium citrate, nicotinic acid, and cinnamic acid; Mixed preparations such as sodium L-glutamate preparation, noodle-added alkali agent, preservative agent, and tar color agent can be mentioned.
본 발명의 식품 조성물은 정제, 캡슐, 분말, 과립, 액상, 환 등의 형태로 제조 및 가공할 수 있다.The food composition of the present invention may be manufactured and processed in the form of tablets, capsules, powders, granules, liquids, pills, and the like.
예를 들어, 캡슐 형태의 건강기능 식품 중 경질캡슐제는 통상의 경질캡슐에 본 발명에 따른 조성물을 부형제 등의 첨가제와 혼합 및 충진하여 제조할 수 있으며, 연질캡슐제는 본 발명에 따른 조성물의 부형제 등의 첨가제와 혼합하고 젤라틴 등 캡슐기제에 충진하여 제조할 수 있다. 상기 연질캡슐제는 필요에 따라 글리세린 또는 소르비톨 등의 가소제, 착색제, 보존제 등을 함유할 수 있다.For example, among the health functional foods in the form of capsules, hard capsules can be prepared by mixing and filling the composition according to the present invention with additives such as excipients in conventional hard capsules, and the soft capsule is the composition of the composition according to the present invention. It can be manufactured by mixing with additives such as excipients and filling in capsule bases such as gelatin. The soft capsule formulation may contain a plasticizer such as glycerin or sorbitol, a colorant, a preservative, and the like, if necessary.
상기 부형제, 결합제, 붕해제, 활택제, 교미제, 착향제 등에 대한 용어 정의는 당업계에 공지된 문헌에 기재된 것으로 그 기능 등이 동일 내지 유사한 것들을 포함한다. 상기 식품의 종류에는 특별한 제한이 없으며, 통상적인 의미에서의 건강기능식품을 모두 포함한다.The term definitions for the excipients, binders, disintegrants, lubricants, flavoring agents, and the like are described in documents known in the art and include those having the same or similar functions. The type of food is not particularly limited, and includes all health functional foods in the ordinary sense.
본 발명에서 용어 “예방”이란 본 발명에 따른 조성물의 투여로 질환의 억제 또는 지연시키는 모든 행위를 말한다. 본 발명에서 용어 “치료”는 본 발명에 따른 조성물의 투여로 질환의 증세가 호전되거나 이롭게 변경하는 모든 행위를 말한다. 본 발명에서 "개선"이란 본 발명의 조성물을 개체에 투여하거나 섭취시켜 질환의 나쁜 상태를 좋게 하는 모든 행위를 의미한다.In the present invention, the term “prevention” refers to any act of inhibiting or delaying a disease by administering the composition according to the present invention. In the present invention, the term “treatment” refers to any action that improves or beneficially changes the symptoms of a disease by administration of the composition according to the present invention. In the present invention, "improvement" refers to any action that improves the bad state of a disease by administering or ingesting the composition of the present invention to an individual.
이하, 본 발명의 이해를 돕기 위하여 실험예 및 실시예를 들어 상세하게 설명하기로 한다. 다만 하기의 실험예 및 실시예는 본 발명의 내용을 예시하는 것일 뿐 본 발명의 범위가 하기 실험예 및 실시예에 한정되는 것은 아니다. 본 발명의 실험예 및 실시예는 당업계에서 평균적인 지식을 가진 자에게 본 발명을 보다 완전하게 설명하기 위해 제공되는 것이다.Hereinafter, experimental examples and examples will be described in detail to help the understanding of the present invention. However, the following experimental examples and examples are only to illustrate the content of the present invention, the scope of the present invention is not limited to the following experimental examples and examples. Experimental examples and examples of the present invention are provided to more completely explain the present invention to those of ordinary skill in the art.
<실험예> 실험 재료 및 방법<Experimental example> Experimental material and method
하기의 실험예들은 본 발명에 따른 각각의 실시예에 공통적으로 적용되는 실험예를 제공하기 위한 것이다.The following experimental examples are intended to provide experimental examples commonly applied to each embodiment according to the present invention.
1. 플라스미드 구성 및 단백질 정제1. Plasmid Construction and Protein Purification
SARS-CoV-2의 nsp15를 암호화하는 유전자는 Bioneer Corp. (Daejeon, Korea)에서 합성하였다. nsp15 유전자는 헥사히스티딘 태그 및 토바코 에칭 바이러스(TEV)절단 부위와 함께 pProEx-HTa 벡터 (Thermo Fisher Scientific, MA, USA)에 삽입되었다. 플라스미드를 E. coli BL21 (DE3) 균주로 형질전환 하였다. 형질전환된 세포는 1.0의 OD600으로 측정될 때까지 37℃에서 100 μg/ml 암피실린을 포함하는 4 L의 Terrific Broth 배지에서 배양되었고, 단백질 발현은 0.5 mM isopropyl β-D-1-thio-galactopyranoside를 사용하여 16℃에서 20 시간 동안 유도되었다. 원심 분리로 세포를 수확한 후, 50 mM Tris-HCl (pH 8.0), 500 mM NaCl, 5% (v/v) glycerol, 및 2 mM 2-mercaptoethanol을 포함하는 용해 완충액에 재현탁하였다. 이후 초음파 처리로 세포를 파괴한 후, 4℃에서 19,000 g으로 30분 동안 원심분리하여 세포 파편을 제거하였다. 세포 용해물을 Ni-NTA 친화성 아가로스 수지(GE Healthcare, IL, USA)에 로딩하였다. 표적 단백질은 500 mM 이미다졸이 보충된 용해 완충액으로 용출되었다. 풀링된 단백질을 수집하고, Superdex 200 pg HiLoad 26/600 크기 배제 크로마토그래피 컬럼(GE Healthcare)에 로딩하였다. 샘플을 로딩하기 전에 컬럼을 50 mM Tris-HCl (pH 8.0), 150 mM NaCl, 및 5 mM β-mercaptoethanol을 포함하는 버퍼로 평형화하였다. 정제된 단백질을 농축하고 -80℃에서 보관하였다.The gene encoding nsp15 of SARS-CoV-2 was obtained from Bioneer Corp. (Daejeon, Korea). The nsp15 gene was inserted into the pProEx-HTa vector (Thermo Fisher Scientific, MA, USA) together with a hexahistidine tag and a tobacco etch virus (TEV) cleavage site. The plasmid was transformed into E. coli BL21 (DE3) strain. Transformed cells were cultured in 4 L of Terrific Broth medium containing 100 μg/ml ampicillin at 37° C. until an OD 600 of 1.0 was measured, and protein expression was 0.5 mM isopropyl β-D-1-thio-galactopyranoside. was induced at 16 °C for 20 hours. After harvesting the cells by centrifugation, they were resuspended in a lysis buffer containing 50 mM Tris-HCl (pH 8.0), 500 mM NaCl, 5% (v/v) glycerol, and 2 mM 2-mercaptoethanol. After destroying the cells by sonication, the cells were centrifuged at 19,000 g at 4° C. for 30 minutes to remove cell debris. Cell lysates were loaded onto Ni-NTA affinity agarose resin (GE Healthcare, IL, USA). The target protein was eluted with lysis buffer supplemented with 500 mM imidazole. Pooled proteins were collected and loaded onto a Superdex 200
2. 엔도리보뉴클레아제 분석2. Endoribonuclease Assay
5’말단에 카르복시플루오레세인(FAM) 형광단과 3’말단에 테트라메틸로다민(TAMRA)을 포함하는 올리고 뉴클레오티드 기질을 사용하여 실시간 엔도리보뉴클레아제 분석을 수행하였다. 올리고뉴클레오티드 기질인 5'-FAM-dArUdAdAdA-TAMRA-3’은 Bioneer Corp. (Daejeon, Korea)에서 합성하였다. 20 mM Tris-HCl (pH 8.0), 150 mM NaCl, 5 mM MnCl2, 및 1 mM dithiothreitol (DTT)을 포함하는 버퍼에서 2 μM의 기질을 1 μM Nsp15와 함께 사용하였다. 초기 스크리닝은 여러 회사에서 구입한 천연 화합물로 구성된 라이브러리를 이용해 수행했고, 각각의 화합물을 20 μM 농도로 사용하였다. 구체적으로 녹차 추출물은 NOW Foods(IL, USA)에서, >95% EGCG 및 baicalein은 Sigma Aldrich(MO, USA)에서, >95% pure baicalin은 LiftMode(IL, USA)에서, quercetin은 Jarrow Formulas(CA, USA)에서 구입하였다. 천연 화합물은 DMSO(baicalin, baicalein, quercetin) 또는 증류수(녹차, EGCG)에 용해시키고, 각 반응에 대한 다양한 농도로 희석하였다. FAM 형광 신호의 방출은 SpectraMax i3x (Molecular Devices, LLC., CA, USA)를 사용하여 1 시간 동안 여기 파장 492 nm 및 방출 파장 518 nm로 검출하였다. 반응 속도 및 IC50 값은 Prism 8 software (GraphPad, CA, USA)를 사용하여 계산되었다.Real-time endoribonuclease analysis was performed using an oligonucleotide substrate containing a carboxyfluorescein (FAM) fluorophore at the 5' end and tetramethylrhodamine (TAMRA) at the 3' end. The oligonucleotide substrate 5'-FAM-dArUdAdAdA-TAMRA-3' was obtained from Bioneer Corp. (Daejeon, Korea). 2 μM of the substrate was used together with 1 μM Nsp15 in a buffer containing 20 mM Tris-HCl (pH 8.0), 150 mM NaCl, 5
3. SARS-CoV-2의 플라크 감소 중화 테스트(PRNT)3. Plaque Reduction Neutralization Test (PRNT) of SARS-CoV-2
질병관리청(KDCA, 구 질병관리본부)에서 제공하는 SARS-CoV-2 (NCCP 43326)를 녹차 추출물, EGCG, 또는 baicalin이 함유된 연속 희석된 무혈청 배지와 함께 37℃에서 30분 동안 사전 배양하였다. 그 후, Vero 세포를 실온에서 30 분 동안 사전 배양된 SARS-CoV-2로 감염시키고, 0.8% 저융점 아가로즈로 덮었다. SARS-CoV-2 감염 72 시간 후, 세포를 10% 포르말린으로 고정하고, 0.05% 크리스탈 바이올렛으로 염색하여 바이러스 플라크를 계수하였다. 모든 절차는 생물 안전성 수준 3(BSL-3) 시설에서 수행되었다.SARS-CoV-2 (NCCP 43326) provided by the Korea Centers for Disease Control and Prevention (KDCA, former Centers for Disease Control and Prevention) was pre-incubated with green tea extract, EGCG, or serially diluted serum-free medium containing baicalin at 37°C for 30 minutes. . Then, Vero cells were infected with SARS-CoV-2 pre-incubated for 30 min at room temperature and covered with 0.8% low-melting agarose. 72 hours after SARS-CoV-2 infection, cells were fixed with 10% formalin and stained with 0.05% crystal violet to count viral plaques. All procedures were performed in a Biosafety Level 3 (BSL-3) facility.
4. 분자 도킹 연구4. Molecular docking studies
EGCG(epigallocatechin gallate)와 Nsp15의 분자 도킹은 AutoDock Vina로 수행되었다. SARS-CoV-2의 Nsp15 결정 구조 (PDB: 6VWW)를 검색 모델로 사용하였으며, 리간드 도킹 사이트의 그리드 상자는 활성 부위 포켓과 인접 영역을 덮었다. 동일한 소프트웨어를 사용하여 Nsp15와 EGCG 사이의 결합 에너지를 계산하기 위해 가장 낮은 RMSD(평균 제곱근편차) 값을 가진 가장 적합한 형태를 선택하였다. Nsp15와 EGCG 간의 상호 작용은 단백질 - 리간드 상호 작용 프로파일러(PLIP) 웹 서버를 사용하여 분석되었다.Molecular docking of epigallocatechin gallate (EGCG) and Nsp15 was performed with AutoDock Vina. The Nsp15 crystal structure of SARS-CoV-2 (PDB: 6VWW) was used as a search model, and a grid box of ligand docking sites covered the active site pocket and adjacent regions. The most suitable form with the lowest RMSD (root mean square deviation) value was selected to calculate the binding energy between Nsp15 and EGCG using the same software. The interaction between Nsp15 and EGCG was analyzed using the protein-ligand interaction profiler (PLIP) web server.
실시예 1. 천연 화합물 라이브러리에서 Nsp15 엔도리보뉴클레아제에 대한 억제제 스크리닝Example 1. Inhibitor screening for Nsp15 endoribonuclease in natural compound library
맞춤형 유전자 합성 서비스를 통해 SARS-CoV-2에서 Nsp15 유전자를 합성했으며, Escherichia coli 발현 시스템에서 단백질을 과잉 생산하였다. 대장균을 16℃에서 유도했을 때 단백질은 가용성 형태로 발현되었다. 5'-FAM-dArUdAdAdA-TAMRA-3 '를 기질로 사용하여 기존에 확립된 분석법을 적용했을 때, 정제한 단백질은 엔도뉴클리보뉴클레아제 활성을 나타냈다. 합성 기질이 Nsp15에 의해 rU 부위에서 절단될 때, TAMRA로부터 유리된 FAM은 512 nm에서 형광 신호를 방출하였다. 도 1에 나타난 바와 같이, 스크리닝을 위해 식용 천연 화합물로 구성된 복합 라이브러리를 사용하였다. 도 2 및 3에 나타난 바와 같이, 초기 스크리닝에서 수용성 녹차 추출물, 바이칼린(baicalin), 및 퀘르세틴(quercetin)이 억제제 후보로 확인되었다. 특히, 도 4에 나타난 바와 같이, Nsp15 효소와 함께 바이칼린(baicalin)의 사전 배양은 억제 효과를 두 배로 증가시켜 느린 결합 패턴을 나타냈다. Nsp15 효소의 구조적 유연성은 억제제의 사전 배양 효과와 연관될 수 있다. The Nsp15 gene was synthesized from SARS-CoV-2 through a customized gene synthesis service, and the protein was overproduced in the Escherichia coli expression system. When E. coli was induced at 16°C, the protein was expressed in a soluble form. When the previously established assay was applied using 5'-FAM-dArUdAdAdA-TAMRA-3 ' as a substrate, the purified protein exhibited endonuclebonuclease activity. When the synthetic substrate was cleaved at the rU site by Nsp15, FAM liberated from TAMRA emitted a fluorescence signal at 512 nm. As shown in FIG. 1 , a complex library composed of edible natural compounds was used for screening. As shown in FIGS. 2 and 3 , water-soluble green tea extract, baicalin, and quercetin were identified as inhibitor candidates in the initial screening. In particular, as shown in FIG. 4 , pre-incubation of baicalin with Nsp15 enzyme doubled the inhibitory effect, resulting in a slow binding pattern. The structural flexibility of the Nsp15 enzyme may be correlated with the pre-culture effect of the inhibitor.
실시예 1-1. EGCG(Epigallocatechin gallate)Example 1-1. Epigallocatechin gallate (EGCG)
스크리닝에 사용된 녹차 추출물에는 EGCG(epigallocatechin gallate), 에피갈로카테킨(epigallocatechin), 및 카테킨갈레이트(catechin gallate)가 포함되어 있다. EGCG는 녹차 추출물에서 가장 풍부한 카테킨이다. 도 5에 나타난 바와 같이, 녹차 추출물은 2.54 μg/ml의 IC50 값으로 SARS-CoV-2의 Nsp15 효소를 강력하게 억제하였다. EGCG가 Nsp15의 억제 화합물인지 여부를 분석하기 위해, 동일한 Nsp15 리보뉴클레아제 분석에서 순수한 EGCG (>95% 순도)를 사용하였다. 순수한 EGCG 화합물은 Nsp15 효소를 강하게 억제했으며, IC50 값은 0.78 μg/ml 또는 1.70 μM 정도로 측정되었다. 같은 질량을 사용했을 때 순수 EGCG는 녹차 추출물보다 3배 이상의 높은 억제 활성을 나타냈다. EGCG는 녹차의 약 50%를 차지하기 때문에, 녹차 추출물의 억제 효과는 EGCG의 억제 활성으로 설명할 수 있다. 따라서 녹차 추출물의 억제 효과가 EGCG에 기인한 것임을 확인하였다.The green tea extract used for screening contained epigallocatechin gallate (EGCG), epigallocatechin, and catechin gallate. EGCG is the most abundant catechin in green tea extract. As shown in FIG. 5 , the green tea extract strongly inhibited the Nsp15 enzyme of SARS-CoV-2 with an IC 50 value of 2.54 μg/ml. To analyze whether EGCG is an inhibitory compound of Nsp15, pure EGCG (>95% purity) was used in the same Nsp15 ribonuclease assay. The pure EGCG compound strongly inhibited the Nsp15 enzyme, and the IC 50 value was measured to be about 0.78 μg/ml or 1.70 μM. When the same mass was used, pure EGCG showed more than 3 times higher inhibitory activity than green tea extract. Since EGCG accounts for about 50% of green tea, the inhibitory effect of green tea extract can be explained by the inhibitory activity of EGCG. Therefore, it was confirmed that the inhibitory effect of green tea extract was due to EGCG.
실시예 1-2. 바이칼린(baicalin), 바이칼레인(baicalein), 및 퀘르세틴(quercetin)Example 1-2. baicalin, baicalein, and quercetin
바이칼린(baicalin)은 플라보노이드 바이칼레인(baicalein)의 글루쿠로나이드(glucuronide)이며, Scutellaria baicalensis, S. lateriflora, 및 S. galericulata 잎에서 널리 발견된다. 바이칼린(baicalin) 및 바이칼레인(baicalein)은 잘 알려진 프롤린 엔도펩티다제 억제제이다. 특히, 바이칼린(baicalin) 및 바이칼레인(baicalein)은 SARS-CoV-2의 프로테아제 3CLpro에 대한 억제 효과를 나타낸다고 보고된 바 있다. 바이칼레인(baicalein)과 복합체를 이루는 코로나바이러스 프로테아제의 고해상도 구조는 바이칼린(baicalin) aglycone 부분이 프로테아제의 활성 부위에 단단히 결합하는 것으로 나타났다.Baicalin is a glucuronide of the flavonoid baicalein, and is widely found in the leaves of Scutellaria baicalensis , S. lateriflora , and S. galericulata . Baicalin and baicalein are well known proline endopeptidase inhibitors. In particular, it has been reported that baicalin and baicalein exhibit an inhibitory effect on the protease 3CLpro of SARS-CoV-2. The high-resolution structure of the coronavirus protease complexed with baicalein showed that the baicalin aglycone moiety tightly binds to the active site of the protease.
도 5에 나타난 바와 같이, 바이칼린(baicalin) 및 바이칼레인(baicalein)은 모두 10 μM 미만에서 유의한 억제 효과가 나타났다(바이칼린의 IC50은 7.98 μM (3.56 μg/ml)이고, 바이칼레인의 IC50은 8.61 μM (2.33 μg/ml)이다). 기존 연구에 따르면 세포 독성 분석에서 바이칼린(baicalin)은 바이칼레인(baicalein)에 비해 50% 세포 독성 농도(CC50) 값이 더 높았으며(바이칼린은 188.4 μg/ml, 바이칼레인은 8.9 μg/ml), 이는 바이칼린(baicalin)의 세포 독성이 낮다는 것을 의미한다.As shown in FIG. 5 , both baicalin and baicalein showed a significant inhibitory effect at less than 10 μM (IC 50 of baicalin was 7.98 μM (3.56 μg/ml), and that of baicalin was IC 50 is 8.61 μM (2.33 μg/ml). According to the previous study, in the cytotoxicity assay, baicalin had a higher 50% cytotoxic concentration (CC 50 ) value than baicalein (188.4 μg/ml for baicalin and 8.9 μg/ml for baicalein). ml), which means that the cytotoxicity of baicalin is low.
또한, 플라보노이드 퀘르세틴(quercetin)으로 동일한 Nsp15 분석을 수행하였다. 퀘르세틴(quercetin)(3,3′,4′,5,7-pentahydroxyflavone)은 양파 껍질, 사과, 적포도 및 녹색 잎 채소에 매우 풍부하다. 퀘르세틴(quercetin)은 유사한 플라보노이드 중에서 항산화성이 높으며, 잠재적인 항암제 및 항바이러스제로 주목받고 있다. 도 5에 나타난 바와 같이, SARS-CoV-2 Nsp15 효소 분석에서 퀘르세틴(quercetin)은 약 13.79 μM(4.17 μg/ml)의 IC50으로 Nsp15에 대한 억제 활성을 나타냈다. 플라보노이드 퀘르세틴(quercetin) 및 바이칼린(baicalin)의 구조적 유사성은 Nsp15의 활성 부위에서 결합 모드가 공유될 수 있음을 의미한다. 그러나 EGCG의 화학 구조가 바이칼린(baicalin) 및 퀘르세틴(quercetin)의 화학 구조와는 상당히 다르기 때문에, EGCG의 결합 모드는 바이칼린(baicalin) 및 퀘르세틴(quercetin)와 공유되지 않을 수 있다.In addition, the same Nsp15 assay was performed with the flavonoid quercetin. Quercetin (3,3',4',5,7-pentahydroxyflavone) is very abundant in onion peels, apples, red grapes and green leafy vegetables. Quercetin (quercetin) has high antioxidant properties among similar flavonoids, and is attracting attention as a potential anticancer and antiviral agent. As shown in FIG. 5 , in the SARS-CoV-2 Nsp15 enzyme assay, quercetin exhibited inhibitory activity against Nsp15 with an IC 50 of about 13.79 μM (4.17 μg/ml). The structural similarity of the flavonoids quercetin and baicalin means that the binding mode may be shared at the active site of Nsp15. However, since the chemical structure of EGCG is significantly different from that of baicalin and quercetin, the binding mode of EGCG may not be shared with baicalin and quercetin.
실시예 2. 세포내 SARS-CoV-2에 대한 녹차 추출물, EGCG, 및 바이칼린(baicalin)의 항 바이러스 활성Example 2. Antiviral activity of green tea extract, EGCG, and baicalin against intracellular SARS-CoV-2
퀘르세틴(quercetin) 및 바이칼레인(baicalein)도 Nsp15 효소에 대한 억제 활성을 나타냈지만, 상대적으로 낮은 억제 활성과 물에 녹지 않는 성질로 인해 항 바이러스 활성 실험에서는 제외되었다. 녹차 추출물, EGCG, 및 바이칼린(baicalin)의 항 바이러스 활성을 평가하기 위해, COVID-19 환자로부터 분리된 SARS-CoV-2를 사용하여 플라그 감소 중화 테스트를 수행하였다. PRNT는 항 바이러스 중화 항체의 순환 수준을 정량화 하는 표준 방법이다. Vero 세포는 다양한 농도의 녹차 추출물, EGCG, 또는 바이칼린(baicalin)과 함께 사전 배양되고, SARS-CoV-2 바이러스로 감염되었다. 살아있는 바이러스 역가를 측정하기 위해 바이러스 플라크의 수를 세었다.Quercetin and baicalein also showed inhibitory activity on the Nsp15 enzyme, but were excluded from the antiviral activity experiment due to their relatively low inhibitory activity and insoluble properties in water. To evaluate the antiviral activity of green tea extract, EGCG, and baicalin, a plaque reduction neutralization test was performed using SARS-CoV-2 isolated from COVID-19 patients. PRNT is a standard method for quantifying circulating levels of antiviral neutralizing antibodies. Vero cells were pre-incubated with various concentrations of green tea extract, EGCG, or baicalin, and infected with SARS-CoV-2 virus. Viral plaques were counted to determine live virus titer.
도 6에 나타난 바와 같이, 녹차 추출물과 EGCG는 각각 0.24 μg/ml 및 0.20 μM (0.092 μg/ml)의 반중화 효과(PRNT50)를 나타냈다. Nsp15 분석 결과에 나타난 바와 같이, 녹차 추출물의 EGCG의 함량을 고려할 때, EGCG가 녹차 추출물의 항 바이러스 활성의 주요 구성 요소임을 알 수 있다. 바이칼린(baicalin)은 EGCG에 비해 제한된 항 바이러스 활성을 나타냈다 (PRNT50 = 83.3 μM (37.2 μg/ml)). 이는 실험에 사용한 배지에 낮은 용해도를 보이는 바이칼린(baicalin)의 특성으로 설명할 수 있다.As shown in FIG. 6 , green tea extract and EGCG exhibited anti-neutralizing effects (PRNT 50 ) of 0.24 μg/ml and 0.20 μM (0.092 μg/ml), respectively. As shown in the results of Nsp15 analysis, considering the content of EGCG in green tea extract, it can be seen that EGCG is a major component of antiviral activity of green tea extract. Baicalin showed limited antiviral activity compared to EGCG (PRNT 50 = 83.3 μM (37.2 μg/ml)). This can be explained by the characteristics of baicalin showing low solubility in the medium used for the experiment.
실시예 3. Nsp15 및 EGCG의 도킹 모델Example 3. Docking model of Nsp15 and EGCG
Nsp15 결합에 대한 분자 통찰력을 얻기 위해, SARS-CoV-2 의 Nsp15 결정 구조 (PDB: 6VWW)를 사용하여 도킹 모델을 생성하였다. AutoDock Vina 소프트웨어를 사용할 때, 도킹 모델은 Nsp15의 활성 부위에 결합하는 EGCG를 최상위 순위로 나타냈다. 이 분자 도킹의 결합 에너지는 -6.9?kcal/mol로 계산되었다.To gain molecular insight into Nsp15 binding, a docking model was generated using the Nsp15 crystal structure of SARS-CoV-2 (PDB: 6VWW). When using AutoDock Vina software, the docking model ranked EGCG binding to the active site of Nsp15 as the top priority. The binding energy of this molecular docking was calculated to be -6.9 kcal/mol.
도 7에 나타난 바와 같이, EGCG 분자는 Nsp15의 활성 부위에 단단히 결합되어 있는 것으로 나타났다. 도킹 모델에 따르면, EGCG의 많은 수산기가 Nsp15의 활성 부위에 있는 모든 주요 잔기와 상호작용한다. PLIP 웹 서버를 사용하여 도킹 모델에서 EGCG-Nsp15 상호 작용을 분석하였다.As shown in FIG. 7 , the EGCG molecule was found to be tightly bound to the active site of Nsp15. According to the docking model, many hydroxyl groups of EGCG interact with all major residues in the active site of Nsp15. EGCG-Nsp15 interaction was analyzed in the docking model using the PLIP web server.
도 8에 나타난 바와 같이, 결합된 EGCG 분자는 Nsp15 활성 부위에서 Lys290, Val292, Tyr343, 및 Leu346과 소수성 상호작용을 하고, 활성 부위에서 His235, Gly248, His250, Lys290, Ser294, 및 Thr341과 수소 결합을 형성하였다. EGCG의 카보닐기는 Lys290과 극성 상호작용을 한다. EGCG의 갈레이트(gallate) 고리는 페닐 고리(B-ring)와 파이 상호작용으로 쌓였고, 쌓인 두 고리는 활성 부위에 잘 맞다. 이 도킹 모델은 Nsp15 효소의 활성을 억제할 때 EGCG의 갈레이트(gallate) 고리가 중요함을 나타낸다.As shown in FIG. 8 , the bound EGCG molecule had hydrophobic interactions with Lys290, Val292, Tyr343, and Leu346 at the Nsp15 active site, and hydrogen bonds with His235, Gly248, His250, Lys290, Ser294, and Thr341 at the active site. formed. The carbonyl group of EGCG has a polar interaction with Lys290. The gallate rings of EGCG were stacked by a pi interaction with the phenyl ring (B-ring), and the two stacked rings fit well into the active site. This docking model indicates that the gallate ring of EGCG is important in inhibiting the activity of the Nsp15 enzyme.
이상으로 본 발명 내용의 특정한 부분을 상세히 기술하였는 바, 당업계의 통상의 지식을 가진 자에게 있어서, 이러한 구체적 기술은 단지 바람직한 실시양태일 뿐이며, 이에 의해 본 발명의 범위가 제한되는 것이 아닌 점은 명백하다. 즉, 본 발명의 실질적인 범위는 첨부된 청구항들과 그것들의 등가물에 의하여 정의된다.As described above in detail a specific part of the content of the present invention, for those of ordinary skill in the art, it is clear that this specific description is only a preferred embodiment, and the scope of the present invention is not limited thereby. do. That is, the substantial scope of the present invention is defined by the appended claims and their equivalents.
Claims (8)
[화학식 1]
The pharmaceutical composition according to claim 2, wherein the epigallocatechin gallate (EGCG) is a compound represented by the following formula (1).
[Formula 1]
[화학식 2]
The pharmaceutical composition according to claim 2, wherein the baicalin is a compound represented by the following formula (2).
[Formula 2]
[화학식 3]
The pharmaceutical composition according to claim 2, wherein the quercetin is a compound represented by the following formula (3).
[Formula 3]
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