KR100807182B1 - - 2 Ubiquitin-like Protein Specific Protease UfSP2 and Process for Preparing the Same - Google Patents

- 2 Ubiquitin-like Protein Specific Protease UfSP2 and Process for Preparing the Same Download PDF

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KR100807182B1
KR100807182B1 KR1020060129759A KR20060129759A KR100807182B1 KR 100807182 B1 KR100807182 B1 KR 100807182B1 KR 1020060129759 A KR1020060129759 A KR 1020060129759A KR 20060129759 A KR20060129759 A KR 20060129759A KR 100807182 B1 KR100807182 B1 KR 100807182B1
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정진하
방옥선
강성환
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재단법인서울대학교산학협력재단
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Abstract

A novel protease is provided to show the specific protease activity on Ufm1, which acts on an important mechanism in a cell, thereby being widely utilized for investigating the important mechanism in the cell where the Ufm1 involves. A Ufm1-specific protease 2(UfSP2) includes an amino acid sequence of SEQ ID : NO. 1. A method for preparing the UfSP2 comprises the steps of: (a) culturing a transformant which is prepared by transforming E. coli BL21 using an expression plasmid of pMAL-c2X-UfSP2; and (b) obtaining the UfSP2 from the cultured fungus bodies.

Description

유비퀴틴-유사 단백질 특이적인 단백질 분해효소 UfSP2 및 그의 제조방법{Ubiquitin-like Protein Specific Protease UfSP2 and Process for Preparing the Same}Ubiquitin-like Protein Specific Protease UfSP2 and Process for Preparing the Same}

도 1은 UfSP2 발현용 발현벡터인 pMAL-c2X-UfSP2의 유전자지도이다.1 is a genetic map of pMAL-c2X-UfSP2, which is an expression vector for UfSP2 expression.

도 2는 UfSP2 및 UfSP2 C249S로 GST-Ufm1-HA를 절단한 결과를 나타내는 전기영동사진이다.Figure 2 is an electrophoresis picture showing the result of cutting the GST-Ufm1-HA with UfSP2 and UfSP2 C249S.

도 3은 UfSP2로 GST-Ufm1-HA, GST-Ub-HA, GST-SUMO-1-HA 또는 GST-ISG15-HA를 절단한 결과를 나타내는 전기영동사진이다.Figure 3 is an electrophoresis picture showing the result of cutting GST-Ufm1-HA, GST-Ub-HA, GST-SUMO-1-HA or GST-ISG15-HA with UfSP2.

본 발명은 유비퀴틴-유사 단백질 특이적인 단백질 분해효소 UfSP2 및 그의 제조방법에 관한 것이다. 좀 더 구체적으로, 본 발명은 유비퀴틴-유사 단백질인 Ufm1 특이적인 단백질 분해효소인 Ufm1-특이적 단백질 분해효소(Ufm1-specific protease 1, UfSP2), 전기 UfSP2를 암호화하는 유전자, 전기 유전자를 포함하는 발 현 플라스미드, 전기 발현 플라스미드로 형질전환된 형질전환체 및 전기 형질전환체로부터 UfSP2를 생산하는 방법에 관한 것이다. The present invention relates to ubiquitin-like protein specific protease UfSP2 and a method for preparing the same. More specifically, the present invention provides a ubiquitin-like protein, Ufm1-specific protease, Ufm1-specific protease (Ufm1-specific protease 1, UfSP2), a gene encoding an electric UfSP2, a foot comprising an electric gene. A method for producing UfSP2 from current plasmids, transformants transformed with electroexpressing plasmids and electrical transformants.

모든 진핵생물에 존재하는 76개의 아미노산으로 구성된 유비퀴틴(ubiquitin) 단백질은 세포내에서 여러 개의 유비퀴틴이 일렬로 연결된 형태나 유비퀴틴의 C-말단에 특정 리보솜 단백질이 α-펩티드 결합으로 연결된 융합단백질 형태로 합성된다(참조: Lund et al., J. Biol. Chem., 260:7609, 1985; Finley et al., Nature, 338:401, 1989).Ubiquitin protein consisting of 76 amino acids in all eukaryotes is synthesized in the form of several ubiquitin in a cell in the cell or a fusion protein in which a specific ribosome protein is linked to the C-terminus of the ubiquitin by an α-peptide bond. (Lund et al., J. Biol. Chem., 260: 7609, 1985; Finley et al., Nature, 338: 401, 1989).

상기 유비퀴틴 단백질은 세포내 다른 단백질들과 결합하는 유비퀴틴화(ubiquitination)를 통하여, 비정상적인 단백질의 분해를 비롯한, 세포주기 조절, 발암성 단백질 분해의 신호기능, 전사의 조절, 스트레스 반응, 신호전달 경로, 항원의 제시 등의 다양한 세포내 반응에 관여하는 것으로 알려져 있다(참조: Wilkinson KD, Annu. Rev. Nutr., 15:161, 1995; Hershko and Ciechanover, Annu. Rev. Biochem., 61:761, 1992; Jentsch, Annu. Rev. Genet., 26:179, 1992; Glotzer et al., Nature, 349:132, 1991; Bond and Sciesinger, Mol. Cell. Biol., 6:4602, 1986). 이러한 유비퀴틴화는 유비퀴틴의 카르복시기 말단 글리신이 표적 단백질의 리신기와 펩티드 결합을 수행함으로써 이루어지며, 추가적으로 유비퀴틴의 C-말단이 이미 표적 단백질에 결합된 유비퀴틴의 리신기와 펩티드 결합을 수행함으로써 이루어진다. 이러한 결합반응은 일련의 E1(Ub-activating enzyme), E2(Ub-conjugating enzyme) 및 E3(Ub-ligaing enzyme) 효소로 구성된 복합효소군에 의해 수행된다(참조: Hochstrasser, M., Annu. Rev. Genet., 30:405, 1996; Varshavsky, A., Trends Biochem. Sci., 22:383, 1997; Hershko and Ciechanover, Annu. Rev. Biochem., 65:801, 1998). The ubiquitin protein, through ubiquitination that binds to other proteins in the cell, including abnormal protein degradation, cell cycle regulation, carcinogenic proteolysis signaling functions, transcription regulation, stress response, signaling pathways, It is known to be involved in various intracellular reactions, such as the presentation of antigen (Wilkinson KD, Annu. Rev. Nutr., 15: 161, 1995; Hershko and Ciechanover, Annu. Rev. Biochem., 61: 761, 1992 Jentsch, Annu. Rev. Genet., 26: 179, 1992; Glotzer et al., Nature, 349: 132, 1991; Bond and Sciesinger, Mol. Cell. Biol., 6: 4602, 1986). This ubiquitination is accomplished by the carboxyl terminal glycine of ubiquitin performing a peptide bond with the lysine group of the target protein, and additionally by performing a peptide bond with the lysine group of the ubiquitin whose C-terminus of ubiquitin is already bound to the target protein. This binding reaction is carried out by a group of complex enzymes consisting of a series of Ub-activating enzyme (E1), Ub-conjugating enzyme (E2) and Ub-ligaing enzyme (E3) enzymes (see Hochstrasser, M., Annu. Rev). Genet., 30: 405, 1996; Varshavsky, A., Trends Biochem.Sci., 22: 383, 1997; Hershko and Ciechanover, Annu. Rev. Biochem., 65: 801, 1998).

한편, 합성된 융합단백질 또는 유비퀴틴화된 단백질 결합체는 유비퀴틴 특이 분해효소(de-ubiquitinating enzyme, DUB)에 의하여, 유비퀴틴 단량체를 유리시킬 수 있는데, 이처럼 유리된 유비퀴틴 단량체는 세포내에서 재활용될 수 있다(참조: Piotrowski et al., J. Biol. Chem., 272:23712, 1997; Swaminanthan and Hochstrasser, Mol. Biol. Chem., 10:2583, 1999; Lam et al., Nature, 385:737, 1997). On the other hand, the synthesized fusion protein or ubiquitinated protein conjugate can release the ubiquitin monomer by the de-ubiquitinating enzyme (DUB), such a free ubiquitin monomer can be recycled intracellularly ( Piotrowski et al., J. Biol. Chem., 272: 23712, 1997; Swaminanthan and Hochstrasser, Mol. Biol. Chem., 10: 2583, 1999; Lam et al., Nature, 385: 737, 1997) .

상기 DUB는 유비퀴틴을 유리시키는 역할을 수행할 뿐만 아니라, 초파리의 발생, 전사억제, 사이토카인 반응, 성장조절과 같은 다양한 세포내 조절과정에 관여하는 것으로 알려져 있다(참조: Huang et al., Science 270:1828, 1995; Moazed and Johnson, Cell 86:667, 1996; Naviglio et al., EMBO J., 17:3241, 1998). 이러한 DUB는 크게 α-펩티드 또는 ε-이소펩티드 결합으로 연결된 유비퀴틴 결합단백질로부터 유비퀴틴을 유리시키는 유비퀴틴-단백질분해효소인 UBP(ubiquitin-specific protease)와 유비퀴틴의 C-말단의 아미드와 에스테르를 절단하는 유비퀴틴 C-말단 가수분해효소인 UCH(Ubiquitin C-terminal hydrolase)로 분류된다(참조: Tobias and Varshavsky, J. Biol. Chem., 266:12021, 1991; Pickart and Rose, J. Biol. Chem., 260:7903, 1985). UBP와 UCH는 유비퀴틴과 결합된 단백질의 아미노산 서열에 관계없이 유비퀴틴과 단백질 사이의 펩티드 결합을 절단할 수 있다는 공 통된 특성을 갖는다.The DUB not only plays a role in liberating ubiquitin, but is also known to be involved in various intracellular control processes such as fruit fly development, transcription inhibition, cytokine response, and growth regulation (Huang et al., Science 270). : 1828, 1995; Moazed and Johnson, Cell 86: 667, 1996; Naviglio et al., EMBO J., 17: 3241, 1998). This DUB is a ubiquitin that cleaves ubiquitin-specific protease (UBP) and ubiquitin-specific protease (UBP) and ubiquitin C-terminal amides and esters, which liberate ubiquitin from ubiquitin binding proteins linked by α-peptide or ε-isopeptide bonds. Ubiquitin C-terminal hydrolase (UCH), a C-terminal hydrolase (Tobias and Varshavsky, J. Biol. Chem., 266: 12021, 1991; Pickart and Rose, J. Biol. Chem., 260). : 7903, 1985). UBP and UCH have the common property of cleaving peptide bonds between ubiquitin and protein regardless of the amino acid sequence of the protein bound to ubiquitin.

한편, 유비퀴틴의 아미노산 서열과 약 30% 내외의 유사성을 가진 Nedd8, SUMO, ISG15, Ufm1 등의 유비퀴틴-유사 단백질(Ub-like proteins, Ubl)들이 보고되었다(참조: Kawakami et al., EMBO J., 20:4003, 2001; Saitoh and Hinchey, J. Biol. Chem., 275:6252, 2000; Potter et al., J. Biol. Chem., 274:25061, 1999; Komatsu et al., EMBO J., 23:1977, 2004). 이러한 유비퀴틴-유사 단백질들도 유비퀴틴과 유사한 방식으로 PML(promyelocytic leukemia protein), RanGAP1(Ran-GTPase activating protein), p53(tumor suppressor), IκBα(inhibitor of NF-kappaB) 등의 다양한 단백질들과 결합하여 결합체를 형성하고, 각 Ubl에 특이적인 단백질 분해효소를 통하여, 상기 결합체로부터 유리될 수 있는 것으로 알려져 있고, 비록 결합된 단백질의 분해를 유발하지는 못하지만, 결합된 단백질의 세포내 활성을 조절할 수는 있는 것으로 알려져 있다(참조: Tanaka et al., Mol. Cell, 8:503, 1998; Hochstrasser, Nat. Cell Biol., 2:E153-E157, 2000; Melchior F., Annu. Rev. Cell. Dev. Biol., 16:591, 2000; Yeh et al., Gene, 248:1, 2000; Muller at al., Nat. Rev. Mol. Cell Biol., 2:202, 2001; Komatsu et al., EMBO J., 23:1977, 2004). Meanwhile, Ub-like proteins (Ubl) such as Nedd8, SUMO, ISG15, and Ufm1 have about 30% similarity with the amino acid sequence of ubiquitin (Kawakami et al., EMBO J. 20: 4003, 2001; Saitoh and Hinchey, J. Biol. Chem., 275: 6252, 2000; Potter et al., J. Biol. Chem., 274: 25061, 1999; Komatsu et al., EMBO J. , 23: 1977, 2004). These ubiquitin-like proteins are combined with various proteins such as promyelocytic leukemia protein (PML), ran-GTPase activating protein (RANGAP1), tumor suppressor (p53), and inhibitor of NF-kappaB (IKBα) in a similar manner to ubiquitin. It is known to form a conjugate and can be liberated from the conjugate through proteolytic enzymes specific for each Ubl, and although it does not cause degradation of the bound protein, it can modulate the intracellular activity of the bound protein. Tanaka et al., Mol. Cell, 8: 503, 1998; Hochstrasser, Nat. Cell Biol., 2: E153-E157, 2000; Melchior F., Annu. Rev. Cell. Dev. Biol , 16: 591, 2000; Yeh et al., Gene, 248: 1, 2000; Muller at al., Nat. Rev. Mol. Cell Biol., 2: 202, 2001; Komatsu et al., EMBO J. , 23: 1977, 2004).

최근에는, 선충류 이상의 다세포 생물에서만 존재하는 83개의 아미노산으로 구성된 새로운 Ubl인 Ufm1(ubiquitin-fold modifier 1)이 보고되었는데, Ufm1은 C-말단이 발린과 글리신으로 구성되고, 유비퀴틴과 그 아미노산 서열상에서 16%의 유사성을 보이며, 3차 구조에서도 유비퀴틴 및 다른 유비퀴틴-유사 단백질과 매우 유 사함이 보고되었다(참조: Sasakawa et al., Biochem. Biophys. Res. Commun., 343: 21, 2006). 다만, 이러한 Ufm1과 단백질이 결합하여 형성한 결합체로부터 Ufm1을 해리시킬 수 있는, Ufm1 특이적인 단백질 분해효소가 아직까지도 규명되지 않고 있기 때문에, Ufm1의 세포내 활성을 규명하려는 연구에 어려움을 겪고 있는 바, Ufm1 특이적인 단백질 분해효소를 규명하여야 할 필요성이 대두되었다.Recently, a new Ubl, ubiquitin-fold modifier 1 (Ufm1), consisting of 83 amino acids present only in nematode and multicellular organisms, has been reported. Ufm1 consists of the C-terminal valine and glycine, 16 on ubiquitin and its amino acid sequence. Similarity was reported in% and very similar to ubiquitin and other ubiquitin-like proteins in the tertiary structure (Sasakawa et al., Biochem. Biophys. Res. Commun., 343: 21, 2006). However, since Ufm1 specific protease that can dissociate Ufm1 from the conjugate formed by the binding of Ufm1 and protein has not been identified yet, there is a difficulty in researching the intracellular activity of Ufm1. In particular, the need to identify Ufm1-specific proteases has emerged.

이에, 본 발명자들은 Ufm1 특이적인 단백질 분해효소를 규명하고자 예의 연구노력한 결과, 461개의 아미노산으로 구성된 신규한 단백질 분해효소 및 상기 효소를 암호화하는 1386bp의 유전자를 규명하였는 바, 상기 효소가 Ufm1 특이적인 단백질 분해활성을 나타냄을 확인하고, 본 발명을 완성하게 되었다.Thus, the present inventors made a thorough research to identify the Ufm1-specific protease, a novel protease consisting of 461 amino acids and the gene of 1386bp encoding the enzyme, the enzyme is Ufm1-specific protein It confirmed that it exhibits a decomposition activity, and this invention was completed.

결국, 본 발명의 첫 번째 목적은 Ufm1 특이적인 단백질 분해활성을 나타내는 Ufm1 특이적인 단백질 분해효소를 제공하는 것이다.After all, the first object of the present invention is to provide a Ufm1-specific protease that exhibits Ufm1-specific proteolytic activity.

본 발명의 두 번째 목적은 전기 효소를 암호화하는 유전자를 제공하는 것이다.It is a second object of the present invention to provide a gene encoding an electric enzyme.

본 발명의 세 번째 목적은 전기 유전자를 포함하는 발현벡터를 제공하는 것이다.It is a third object of the present invention to provide an expression vector containing the electric gene.

본 발명의 네 번째 목적은 전기 발현벡터로 형질전환된 형질전환체를 제공하는 것이다.A fourth object of the present invention is to provide a transformant transformed with the expression vector.

본 발명의 다섯 번째 목적은 전기 형질전환체를 배양하고, 이로부터 전기 효소를 수득하는 공정을 포함하는, Ufm1 특이적인 단백질 분해효소의 제조방법을 제공하는 것이다.It is a fifth object of the present invention to provide a method for preparing a Ufm1 specific protease, comprising the step of culturing an electric transformant and obtaining the electric enzyme therefrom.

본 발명자들은 Ufm1 특이적인 단백질 분해효소를 규명하기 위하여, 다양한 연구를 수행한 결과, 쥐의 뇌, 간 및 콩팥에 Ufm1 특이적인 단백질 분해활성을 갖는 단백질 분해효소가 존재함을 확인하고, 이를 정제하고자 하였다.The present inventors conducted various studies to identify the Ufm1-specific protease, and as a result, to confirm that there is a protease having Ufm1-specific proteolytic activity in the brain, liver and kidney of the rat, and to purify it It was.

즉, 쥐의 뇌, 간 및 콩팥으로부터 수득한 전체 단백질을 황산암모늄 침전법(ammonium sulfate precipitation method), 이온교환 크로마토그래피 및 소수성 크로마토그래피에 순차적으로 적용하여, 활성분획을 수득하였다. 이때, 활성분획은 기질인 GST-Ufm1-HA 단백질을 이용한 효소활성 반응을 이용하여 확인하였다.That is, the whole protein obtained from the rat brain, liver and kidneys was sequentially applied to ammonium sulfate precipitation method, ion exchange chromatography and hydrophobic chromatography to obtain an active fraction. At this time, the active fraction was confirmed using the enzyme activity reaction using the substrate GST-Ufm1-HA protein.

그런 다음, 전기 수득한 활성분획으로부터 Ufm1 특이적인 단백질 분해효소를 정제하기 위하여, UfSP의 활성부위에 존재하는 시스테인 잔기와 공유결합으로 결합할 수 있는 Flag-Ufm1-VME(vinylmethylester)를 전기 활성분획에 혼합하고, 반응시킨 다음, 항-Flag 항체를 이용한 면역침강법(immunoprecipitation)을 수행하여, Ufm1 특이적인 단백질 분해효소를 정제하였다.Then, in order to purify the Ufm1-specific protease from the previously obtained active fraction, Flag-Ufm1-VME (vinylmethylester) capable of covalently binding to the cysteine residue present in the active site of UfSP was added to the active fraction. After mixing and reacting, immunoprecipitation with an anti-Flag antibody was performed to purify Ufm1-specific protease.

정제된 단백질 분해효소를 프로테오믹스 분석방법인 MS/MS 분석 및 mass 데이터 분석용 데이터베이스(MASCOT)를 이용하여 분석한 결과, 현재까지 그 기능이 알려져 있지 않은 단백질인 LOC70240임을 확인할 수 있었다. The purified protease was analyzed using MS / MS analysis and mass data analysis database (MASCOT), which is a proteomic analysis method, and it was confirmed that LOC70240 is a protein whose function is not known to date.

한편, 상기 단백질과 상동성을 갖는 단백질을 검색한 결과, 약 45%의 아미노산 서열 상동성을 갖는 AAH05503 단백질을 검색할 수 있었다. 상기 AAH05503 단백질은 지금까지 그 기능이 확인되지 않은 단백질로서, 461개 아미노산(서열번호 1)으로 구성되고, 1386bp의 크기를 갖는 유전자(서열번호 2)로부터 발현되며, 기능면에서 종래의 단백질과 어떠한 유사성도 나타내지 않음을 확인하였다. On the other hand, as a result of searching for a protein having homology with the protein, it was possible to search for AAH05503 protein having about 45% amino acid sequence homology. The AAH05503 protein is a protein whose function has not been confirmed so far, and is composed of 461 amino acids (SEQ ID NO: 1), expressed from a gene having a size of 1386 bp (SEQ ID NO: 2), and in terms of function, It was confirmed that no similarity was shown.

이에, 전기 AAH05503 단백질을 발현시킬 수 있는 발현벡터를 작제하여, 상기 단백질을 발현시키고, 이의 효소활성을 측정한 결과, 상기 발현된 단백질은 Ufm1 특이적인 단백질 분해효소활성을 나타냄을 알 수 있었다. 즉, 상기 단백질은 유비퀴틴 유사단백질인 Ufm1의 C-말단의 글리신을 인식하여, Ufm1의 C-말단에 결합한 단백질을 절단할 수 있고, 249번째 아미노산이 이러한 효소활성을 중요한 역할을 수행함을 알 수 있었으며, Ufm1 이외의 다른 유비퀴틴 유사단백질인 SUMO-1과 ISG15 뿐만 아니라, 유비퀴틴에 대하여도 상술한 효소활성을 전혀 나타내지 않았으므로, 상기 단백질은 Ufm1 특이적인 단백질 분해효소임을 알 수 있었다.Accordingly, by constructing an expression vector capable of expressing the AAH05503 protein, the protein was expressed and the enzyme activity thereof was measured. As a result, the expressed protein exhibited Ufm1-specific protease activity. That is, the protein recognizes the C-terminal glycine of Ufm1, a ubiquitin-like protein, and can cleave the protein bound to the C-terminal of Ufm1, and the 249th amino acid plays an important role in this enzymatic activity. In addition to the ubiquitin-like proteins SUMO-1 and ISG15 other than Ufm1, as well as the above-described enzyme activity for ubiquitin, the protein was found to be a Ufm1-specific protease.

이에, 본 발명자들은 상기 단백질을 "UfSP2(Ufm1-specific protease 2)"이라 명명하였다.Thus, the inventors named the protein "UfSP2 (Ufm1-specific protease 2)".

본 발명의 단백질 분해효소는 세포내 주요기작에 작용하는 단백질인 Ufm1에 특이적인 단백질 분해활성을 나타내므로, Ufm1이 관여하는 세포내 주요기작의 규명을 위한 연구에 널리 활용될 수 있을 것이다. Since the protease of the present invention exhibits proteolytic activity specific to Ufm1, a protein that acts on intracellular major mechanisms, it may be widely used for the study of the intracellular major mechanisms involving Ufm1.

이하, 실시예를 통하여 본 발명을 더욱 상세히 설명하고자 한다. 이들 실시예는 오로지 본 발명을 보다 구체적으로 설명하기 위한 것으로, 본 발명의 요지에 따라 본 발명의 범위가 이들 실시예에 의해 제한되지 않는다는 것은 당업계에서 통상의 지식을 가진 자에 있어서 자명할 것이다. Hereinafter, the present invention will be described in more detail with reference to Examples. These examples are only for illustrating the present invention in more detail, it will be apparent to those skilled in the art that the scope of the present invention is not limited by these examples in accordance with the gist of the present invention. .

실시예 1: Ufm1-특이적 단백질 분해효소(Ufm1-specific protease, UfSP)의 정제 및 동정 Example 1 Purification and Identification of Ufm1-specific Protease (UfSP)

실시예 1-1: UfSP의 효소활성 측정용 기질의 작제 Example 1-1 Construction of Substrate for Measuring Enzyme Activity of UfSP

우선, UfSP의 효소활성을 측정하기 위하여, Ufm1의 N-말단에 글루타티온-S-전이효소(GST, glutathione-S-transferase)를 결합시키고, C-말단에 헤마글루티닌(HA, hemagglutinin)을 결합시킨 GST-Ufm1-HA 단백질인 기질을 작제하였다.First, to measure the enzyme activity of UfSP, glutathione-S-transferase (GST) is bound to the N-terminus of Ufm1, and hemagglutinin (HA, hemagglutinin) is attached to the C-terminus. Substrates that were bound GST-Ufm1-HA proteins were constructed.

구체적으로, Ufm1 유전자의 3'-말단에 헤마글루티닌(HA)를 암호화하고 있는 유전자를 결합시킨 절편을 수득하였다. GST를 암호화는 유전자를 포함하는 pGEX4T 벡터(Amersham Pharmacia, USA)를 제한효소인 BamH1으로 절단하고, 전기 수득한 절편을 삽입시켜서 발현벡터인 pGEX4T-Ufm1-HA를 작제하였다. Specifically, a fragment obtained by binding a gene encoding hemagglutinin (HA) to the 3′-end of the Ufm1 gene was obtained. A pGEX4T vector containing gene encoding GST (Amersham Pharmacia, USA) was cut with restriction enzyme BamH1, and the obtained fragment was inserted to construct an expression vector pGEX4T-Ufm1-HA.

전기 작제한 pGEX4T-Ufm1-HA로 대장균 균주인 BL21DE3(Novagen, USA)을 형질전환시키고, 형질전환된 균주를 대장균 배양용 배지인 LB 배지에서 37℃의 조건으 로 배양하였다. 배양하면서 배양액의 흡광도(O.D.600)를 측정하여 흡광도가 0.4가 되는 시점에서 배양액에 IPTG의 최종농도가 1mM이 되도록 이소프로필-티오-베타-D-갈락토피라노시드(isopropyl-thio-β-D-galactopyranoside, IPTG)를 첨가하고, 37℃에서 4시간동안 배양하였다. 배양이 종료된 후, 6,000rpm에서 10분간 원심분리하여 균체를 수득하고, 이를 PBS에 현탁시킨 후, 초음파분쇄기에 적용하여, 균체를 파쇄하였다. 상기 파쇄물을 43,000rpm에서 2시간 동안 원심분리하여 상층액을 수득하고, 이를 글루타티온 세파로즈 칼럼(Amersham Pharmacia, USA)에 적용하여 기질인 GST-Ufm1-HA 단백질을 작제하였다.E. coli strain BL21DE3 (Novagen, USA) was transformed with pGEX4T-Ufm1-HA, which was previously constructed, and the transformed strain was cultured at 37 ° C. in LB medium, which is a medium for E. coli culture. While culturing, the absorbance (OD 600 ) of the culture was measured, and isopropyl-thio-beta-D-galactopyranoside (isopropyl-thio-β- was added so that the final concentration of IPTG was 1 mM at the time when the absorbance became 0.4. D-galactopyranoside (IPTG) was added and incubated at 37 ° C. for 4 hours. After the incubation was completed, the cells were centrifuged at 6,000 rpm for 10 minutes to obtain the cells, which were suspended in PBS, and then subjected to an ultrasonic grinder to disrupt the cells. The lysate was centrifuged at 43,000 rpm for 2 hours to obtain a supernatant, which was subjected to a glutathione Sepharose column (Amersham Pharmacia, USA) to construct the substrate GST-Ufm1-HA protein.

상기 작제한 기질을 이용하여, UfSP의 효소활성을 측정하는 방법은 다음과 같다: 반응 완충용액(100mM Tris-HCl, 1mM DTT, 1mM EDTA, 5%(v/v) 글리세롤, pH 7.8) 30㎕에 기질(GST-Ufm1-HA) 1㎍과 시료 10㎕를 혼합하고, 37℃에서 2시간동안 반응시킨 다음, 상기 반응물을 12%(w/v) SDS-PAGE에 적용하여, 기질의 C-말단에서의 헤마글루티닌의 존재여부를 확인함으로써, Ufm1의 C-말단을 특이적으로 절단하는 UfSP의 효소활성을 측정하였다. Using the prepared substrate, the method for measuring the enzymatic activity of UfSP was as follows: 30 μl of reaction buffer (100 mM Tris-HCl, 1 mM DTT, 1 mM EDTA, 5% (v / v) glycerol, pH 7.8) 1 μg of the substrate (GST-Ufm1-HA) and 10 μl of the sample were mixed, reacted at 37 ° C. for 2 hours, and then the reactant was subjected to 12% (w / v) SDS-PAGE to obtain C- By confirming the presence of hemagglutinin at the terminal, the enzyme activity of UfSP that specifically cleaves the C-terminus of Ufm1 was measured.

실시예 1-2: 컬럼 크로마토그래피를 이용한 UfSP의 부분정제 Example 1-2 : Partial Purification of UfSP Using Column Chromatography

쥐에서 적출된 뇌, 간 및 콩팥을 용해완충액(25mM Tris, 1mM β-mercapto ethanol, 1mM EDTA, 10% glycerol, pH 8.5)에서 균질화하고, 13,000rpm에서 30분간 원심분리하여 상층액을 수득하였다. 상기 상층액에 30-60%(w/v)의 황산암모늄을 이용한 황산암모늄 침전법(ammonium sulfate precipitation method)을 적용하여 UfSP를 포함하는 침전물 분획을 수득하였다. 상기 수득한 침전물 분획을 완충용액(25mM Tris, 1mM β-mercaptoethanol, 1mM EDTA, 10% glycerol, 50mM NaCl, pH 8.5)에 용해시키고 이를 Q-세파로즈(Q-Sepharose, Amersham Pharmacia, USA) 컬럼 크로마토그라피(이동상: 50-300mM NaCl이 용해된 농도구배 완충용액)에 적용하여, UfSP를 포함하는 활성분획을 수득하였다. 수득한 활성분획을 1M 황산암모늄을 포함하는 투석용액(25mM Tris, 1mM β-mercaptoethanol, 1mM EDTA, 10% glycerol, 50mM NaCl, pH 8.5)에서 투석한 다음, 이를 페닐 세파로즈(phenyl Sepharose, Amersham Pharmacia, USA) 컬럼 크로마토그라피(이동상: 1-0M 황산암모늄을 포함하는 농도구배 투석용액)에 적용하여, 0.5M 황산암모늄을 포함하는 투석용액에 의하여 용출된 UfSP를 포함하는 활성분획을 수득하였다.Brain, liver and kidney extracted from the mice were homogenized in lysis buffer (25 mM Tris, 1 mM β-mercapto ethanol, 1 mM EDTA, 10% glycerol, pH 8.5) and centrifuged at 13,000 rpm for 30 minutes to obtain a supernatant. An ammonium sulfate precipitation method using 30-60% (w / v) ammonium sulfate was applied to the supernatant to obtain a precipitate fraction including UfSP. The obtained precipitate fractions were dissolved in buffer (25 mM Tris, 1 mM β-mercaptoethanol, 1 mM EDTA, 10% glycerol, 50 mM NaCl, pH 8.5), which were then subjected to Q-Sepharose (Q-Sepharose, Amersham Pharmacia, USA) column chromatography. It was applied to graphi (mobile phase: concentration gradient buffer in which 50-300 mM NaCl was dissolved) to obtain an active fraction containing UfSP. The obtained active fractions were dialyzed in a dialysis solution containing 1M ammonium sulfate (25 mM Tris, 1 mM β-mercaptoethanol, 1 mM EDTA, 10% glycerol, 50 mM NaCl, pH 8.5), and then phenyl sepharose (phenyl Sepharose, Amersham Pharmacia). , USA) Column chromatography (mobile phase: concentration gradient dialysis solution containing 1-0M ammonium sulfate) to obtain an active fraction containing UfSP eluted by a dialysis solution containing 0.5M ammonium sulfate.

실시예 1-3: Flag-Ufm1-VME(vinylmethylester)를 이용한 UfSP의 정제 Example 1-3 Purification of UfSP Using Flag-Ufm1-VME (vinylmethylester)

실시예 1-3-1: Flag-Ufm1-VME의 작제 Example 1-3-1 Construction of Flag-Ufm1-VME

전기 실시예 1-2에서 수득한 활성분획으로부터 UfSP를 정제하기 위하여, UfSP의 활성부위에 존재하는 시스테인 잔기와 공유결합으로 결합할 수 있는 Flag- Ufm1-VME를 작제하였다(참조: Gan-Erdene et al., J. Biol. Chem., 278:28892-28900, 2003). In order to purify UfSP from the active fraction obtained in Example 1-2, Flag-Ufm1-VME, which is capable of covalently binding to the cysteine residue present in the active site of UfSP, was constructed (see Gan-Erdene et. al. , J. Biol. Chem., 278: 28892-28900, 2003).

구체적으로, 제한효소인 NdeⅠ과 SapⅠ을 이용한 Ufm1의 1 내지 82번 아미노산을 암호화하는 유전자를, 인테인(intein) 단백질 유전자를 포함하는 pTYB1(New England Biolabs) 벡터의 인테인(intein) 단백질 유전자의 5'-말단부에 삽입시켰다. 이어, 상기 Ufm1의 5' 위치에 존재하는 NdeⅠ 절단부위에 FLAG(Sigma) 단백질 서열을 암호화하고 있는 하기의 염기서열을 갖는 DNA 절편을 삽입시켜서, pTYB1-Flag-Ufm1-intein 벡터를 작제하였다.Specifically, the genes encoding amino acids 1 to 82 of Ufm1 using the restriction enzymes Nde I and Sap I are expressed in the intein protein gene of the pTYB1 (New England Biolabs) vector containing the intein protein gene. Inserted at the 5'-end. Subsequently, a pTYB1-Flag-Ufm1-intein vector was constructed by inserting a DNA fragment having the following nucleotide sequence encoding the FLAG (Sigma) protein sequence at the NdeI cleavage site present at the 5 'position of Ufm1.

sense: 5'-tatgatcgactacaaagacgatgacgataaaca-3'(서열번호 3) sense: 5'-tatgatcgactacaaagacgatgacgataaaca-3 '(SEQ ID NO: 3)

antisense: 5'-tatgtttatcgtcatcgtctttgtagtcgatca-3'(서열번호 4) antisense: 5'-tatgtttatcgtcatcgtctttgtagtcgatca-3 '(SEQ ID NO: 4)

상기 작제된 벡터로 대장균 BL21DE3를 형질전환시키고, 형질전환된 균주를 LB배지에서 37℃에서 O.D.600=0.4가 될 때까지 배양한 다음, 배양액을 15℃로 유지하면서, 최종농도가 0.3mM 이 되도록 배양액에 IPTG를 첨가하고, 16시간동안 배양하였다. 배양이 종료된 후, 6,000rpm에서 10분 원심분리하여 균체를 수득하고, 이를 용균완충용액(20mM Tris-HCl, 150mM NaCl, pH 8.0)에 현탁하였으며, 상기 현탁액에 포함된 균체를 초음파분쇄한 다음, 43,000rpm에서 2시간동안 원심분리하여 상층액을 수득하였다. E. coli BL21DE3 was transformed with the constructed vector, and the transformed strain was incubated in LB medium at 37 ° C. until OD 600 = 0.4, and the culture solution was maintained at 15 ° C., so that the final concentration was 0.3 mM. IPTG was added to the culture and incubated for 16 hours. After the incubation was completed, the cells were centrifuged at 6,000 rpm for 10 minutes to obtain cells, which were suspended in lysate buffer solution (20 mM Tris-HCl, 150 mM NaCl, pH 8.0), and the cells contained in the suspension were ultrasonically pulverized. , Was centrifuged at 43,000 rpm for 2 hours to obtain a supernatant.

상기 수득한 상층액과 키틴레진(chitin resin, New England Biolabs, USA)을 4℃에서 2시간동안 혼합하고, 이를 컬럼에 충진한 다음, 1차 완충용액(20mM HEPES, 50mM CH3COONa, pH 6.5)으로 세척한 다음, 50mM MESNa(sodium 2-mercaptoethanesulfonate)을 포함하는 세척완충용액를 가하였다. 그런 다음, 2차 완충용액(20mM HEPES, 50mM CH3COONa, pH 7.0)을 가하여 상기 컬럼에서 용출된 Flag-Ufm1-MESNA를 수득하였다. The obtained supernatant and chitin resin (chitin resin, New England Biolabs, USA) were mixed at 4 ° C. for 2 hours, and filled in a column, followed by primary buffer solution (20 mM HEPES, 50 mM CH 3 COONa, pH 6.5). ), Followed by washing buffer solution containing 50 mM MESNa (sodium 2-mercaptoethanesulfonate). Then, a secondary buffer (20 mM HEPES, 50 mM CH 3 COONa, pH 7.0) was added to obtain Flag-Ufm1-MESNA eluted from the column.

전기 수득한 Flag-Ufm1-MESNa 1ml, 2M 글리신 비닐메틸에스테르 토실레이트(glycine vinylmethylester tosylate) 0.1ml, 2M N-히드록시숙신이미드(N-hydroxysuccinimide) 0.1ml, 5M Tris(pH 7.0) 0.04ml 및 3차 증류수 0.76ml을 혼합하고 37℃에서 4시간동안 반응시킨 다음, 반응물을 S-세파로즈(S-Sepharose, Amersham Pharmacia, USA) 컬럼 크로마토그라피에 적용하여 Flag-Ufm1-VME를 정제하였다. 1 ml of Flag-Ufm1-MESNa obtained previously, 0.1 ml of 2M glycine vinylmethylester tosylate, 0.1 ml of 2M N-hydroxysuccinimide, 0.04 ml of 5M Tris pH 7.0 and 0.76 ml of tertiary distilled water was mixed and reacted at 37 ° C. for 4 hours, and then the reaction was applied to S-Sepharose (S-Sepharose, Amersham Pharmacia, USA) column chromatography to purify Flag-Ufm1-VME.

실시예 1-3-2: Flag-Ufm1-VME를 이용한 UfSP의 정제 Example 1-3-2 Purification of UfSP Using Flag-Ufm1-VME

전기 실시예 1-2에서 수득한 활성분획에 포함된 단백질과 전기 실시예 1-3-1에서 정제한 Flag-Ufm1-VME를 1:1(w/w)로 혼합하고, 37℃에서 12시간 동안 반응시켜서, Flag-Ufm1-VME가 VME기를 통해 UfSP의 활성부위에 존재하는 시스테인 잔기와 공유결합 하도록 하였다. 상기 반응물에 항-Flag 항체를 가하고, 면역침강법을 수 행하여, Flag-Ufm1-VME와 결합된 UfSP를 정제하였다.The protein contained in the active fraction obtained in Example 1-2 was mixed with Flag-Ufm1-VME purified in Example 1-3-1 at 1: 1 (w / w), and 12 hours at 37 ° C. During the reaction, Flag-Ufm1-VME was covalently bound to the cysteine residue present in the active site of UfSP through the VME group. Anti-Flag antibody was added to the reaction and immunoprecipitation was performed to purify UfSP bound with Flag-Ufm1-VME.

실시예 1-4: 프로테오믹스 방법에 의한 UfSP의 동정 Example 1-4 Identification of UfSP by Proteomics Method

상기 실시예 1-3-2에서 정제한 UfSP를 12%(w/v) SDS-PAGE에 적용하고, 그 결과를 이용하여 프로테오믹스 분석방법인 MS/MS 분석 및 mass 데이터 분석용 데이터베이스(MASCOT, http://www.matrixscience.com/search_form_select.html)를 이용한 분석을 수행한 결과, 상기 정제된 UfSP이 현재까지 그 기능이 알려져 있지 않은 단백질인 LOC70240임을 확인할 수 있었다.The UfSP purified in Example 1-3-2 was applied to 12% (w / v) SDS-PAGE, and the results were used for the proteomic analysis method of MS / MS analysis and mass data analysis database (MASCOT, http As a result of the analysis using the method, the purified UfSP was confirmed to be LOC70240, a protein whose function is not known until now.

또한, 블라스트 검색을 통하여, 상기 단백질 LOC70240과 상동성을 갖는 단백질을 검색한 결과, 약 45%의 아미노산 서열 상동성을 갖는 AAH05503 단백질을 검색할 수 있었다. 상기 AAH05503 단백질은 지금까지 그 기능이 확인되지 않은 단백질로서, 461개 아미노산(서열번호 1)으로 구성되고, 1386bp의 크기를 갖는 유전자(서열번호 2)로부터 발현되며, 기능면에서 종래의 단백질과 어떠한 유사성도 나타내지 않음을 확인하였다. In addition, as a result of searching for a protein homologous to the protein LOC70240 through blast search, it was possible to search for AAH05503 protein having an amino acid sequence homology of about 45%. The AAH05503 protein is a protein whose function has not been confirmed so far, and is composed of 461 amino acids (SEQ ID NO: 1), expressed from a gene having a size of 1386 bp (SEQ ID NO: 2), and in terms of function, It was confirmed that no similarity was shown.

실시예 2: UfSP 유전자의 클로닝과 염기서열 및 아미노산 서열확인 Example 2 Cloning and Nucleotide Sequence and Amino Acid Sequence of UfSP Gene

쥐의 뇌 조직의 cDNA 라이브러리를 주형으로 하고, 하기의 염기서열을 갖는 프라이머를 사용한 PCR을 수행하여, AAH05503 단백질을 암호화하는 유전자를 수득 하였다:Using a cDNA library of mouse brain tissue as a template, PCR was performed using primers having the following nucleotide sequence to obtain a gene encoding AAH05503 protein:

Forward: 5'-ctggatccatggatatactcttcagaataag-3'(서열번호 5) Forward: 5'-ctggatccatggatatactcttcagaataag-3 '(SEQ ID NO: 5)

Reverse: 5'-gagtcgacttaaagagcattaggtcgttg-3'(서열번호 6) Reverse: 5'-gagtcgacttaaagagcattaggtcgttg-3 '(SEQ ID NO: 6)

전기 수득한 유전자를 pGEM-T Easy 벡터(Promega Co. Ltd., USA)에 삽입하고, 이를 자동 DNA 서열 분석기(373A, Applied Biosystems, USA)에 적용하여, AAH05503 유전자의 DNA 염기서열을 결정하였다(참조: 서열번호 2). 서열번호 2의 유전자는 1386bp의 염기쌍으로 구성되고, 이로부터 461개의 아미노산으로 구성된, 약 52kDa의 분자량을 갖는 단백질을 발현시키는 것으로 확인되었다(참조: 서열번호 1).The obtained gene was inserted into pGEM-T Easy vector (Promega Co. Ltd., USA) and applied to an automated DNA sequence analyzer (373A, Applied Biosystems, USA) to determine the DNA sequence of the AAH05503 gene ( See SEQ ID NO: 2). The gene of SEQ ID NO: 2 was found to express a protein with a molecular weight of about 52 kDa, consisting of base pairs of 1386 bp, consisting of 461 amino acids (see SEQ ID NO: 1).

이에, 본 발명자들은 전기 유전자로부터 발현되는 단백질을 "UfSP2(Ufm1-specific protease 2)"이라 명명하였다.Thus, the inventors named the protein expressed from the electric gene "UfSP2 (Ufm1-specific protease 2)".

실시예 3: UfSP2 발현용 벡터의 작제 및 단백질 발현 Example 3 Construction of UfSP2 Expression Vector and Protein Expression

실시예 3-1: UfSP2 발현용 벡터의 작제 Example 3-1 Construction of a UfSP2 Expression Vector

전기 실시예 2에서 수득한 UfSP2 유전자로부터 UfSP2을 발현시키기 위해, 상 기 유전자를 박테리아 발현벡터인 pMALc2X(New England Biolabs, USA)에 클로닝하여 UfSP2 발현용 벡터를 작제하였다.In order to express UfSP2 from the UfSP2 gene obtained in Example 2, the gene was cloned into the bacterial expression vector pMALc2X (New England Biolabs, USA) to construct a vector for UfSP2 expression.

즉, 전기 실시예 2에서 작제한 pGEM-T Easy 벡터에 클로닝된 UfSP2 유전자를 제한효소인 BamHⅠ 및 SalⅠ을 이용하여 pMALc2X 벡터에 클로닝하여 단백질 발현벡터인 pMAL-c2X-UfSP2을 작제하였다(참조: 도 1). 도 1은 UfSP2 발현용 발현벡터인 pMAL-c2X-UfSP2의 유전자지도이다.That is, the UFSP2 gene cloned into the pGEM-T Easy vector constructed in Example 2 was cloned into the pMALc2X vector using the restriction enzymes BamHI and SalI to construct pMAL-c2X-UfSP2 as a protein expression vector (see FIG. One). 1 is a genetic map of pMAL-c2X-UfSP2, which is an expression vector for UfSP2 expression.

한편, 상기 pMAL-c2X-UfSP2를 주형으로 하고, 하기의 염기서열을 갖는 프라이머를 이용하며, 부위특이적 돌연변이 키트(QuickChangeTM Site-Directed Mutagenesis kit, Stratagene, USA)를 이용한 PCR을 수행하여, UfSP2의 249번째 시스테인 잔기를 세린으로 치환시킨, 돌연변이 UfSP2 발현용 벡터인 pMAL-c2X-UfSP2 C249S를 작제하였다:On the other hand, using pMAL-c2X-UfSP2 as a template, using a primer having the following nucleotide sequence, PCR using a site-specific mutation kit (QuickChange Site-Directed Mutagenesis kit, Stratagene, USA), UfSP2 PMAL-c2X-UfSP2 C249S, a vector for mutant UfSP2 expression, was constructed by substituting serine for the 249 th cysteine residue of:

Forward: 5'-gacaatggttggggcagtgcttataggtccc-3'(서열번호 7) Forward: 5'-gacaatggttggggcagtgcttataggtccc-3 '(SEQ ID NO: 7)

Reverse: 5'-gggacctataagcactgccccaaccattgtc-3'(서열번호 8) Reverse: 5'-gggacctataagcactgccccaaccattgtc-3 '(SEQ ID NO: 8)

상기 작제된 각각의 발현벡터에는 pMALc2X에서 유래한 말토스 결합 단백질(maltose binding protein, MBP)의 유전자가 존재하므로, UfSP2의 N-말단에 MBP의 C-말단이 결합된 형태(MBP-UfSP2)의 단백질이 발현될 것으로 예측하였다. Since each of the constructed expression vectors has a gene of maltose binding protein (MBP) derived from pMALc2X, the C-terminus of MBP is coupled to the N-terminus of UfSP2 (MBP-UfSP2). It was predicted that the protein would be expressed.

실시예 3-2: UfSP2의 발현 Example 3-2 Expression of UfSP2

전기 작제한 pMAL-c2X-UfSP2 및 pMAL-c2X-UfSP2 C249S을 각각 대장균 BL21에 도입하여, 각각의 형질전환체를 제조하고, 이를 대장균 배양용 LB 배지(100μg/㎖ 앰피실린 포함)에서 배양하면서 600nm에서 흡광도(OD600)를 측정하였다. 전기 측정된 흡광도가 0.6이 되는 시점에서 최종농도 1mM이 되도록 전기 배양물에 IPTG를 가하여 단백질 발현을 유도한 후, 3시간동안 각각 배양하였다. PMAL-c2X-UfSP2 and pMAL-c2X-UfSP2 C249S, which were previously constructed, were respectively introduced into Escherichia coli BL21 to prepare respective transformants, which were incubated at 600 nm while incubated in LB medium for Escherichia coli culture (including 100 μg / ml ampicillin). Absorbance (OD 600 ) was measured at. When the measured absorbance was 0.6, IPTG was added to the electric culture so as to reach a final concentration of 1 mM, and then cultured for 3 hours.

배양이 종료된 후, 각 배양액을 5,000rpm으로 5분간 원심분리하여 배양된 세포를 수득하고, 용균 완충용액(20mM Tris-HCl, 5mM β-머캅토에탄올, 200mM NaCl, 1mM EDTA, pH 7.8)에 현탁시킨 다음, 초음파 처리하여 세포를 분쇄하였으며, 전기 세포분쇄물을 15,000×g에서 1시간동안 원심분리하고, 상층액인 각각의 세포추출물을 수득하였다. 전기 수득한 각각의 세포추출물로부터 MBP-UfSP2 및 MBP-UfSP2 C249S을 각각 정제하기 위하여, 전기 각 세포추출물을 아밀로스(Amylose, New England Biolabs, USA) 컬럼에 적용하고, 10mM 말토스 용액으로 용출하여 MBP-UfSP2 및 MBP-UfSP2 C249S을 포함하는 각각의 활성분획을 수득하고, 이를 전기영동하여 각각의 단백질을 확인하였다After the incubation was completed, each culture solution was centrifuged at 5,000 rpm for 5 minutes to obtain cultured cells, and dissolved in lysis buffer (20 mM Tris-HCl, 5 mM β-mercaptoethanol, 200 mM NaCl, 1 mM EDTA, pH 7.8). After suspension, the cells were pulverized by sonication, and the electric cell grinding was centrifuged at 15,000 × g for 1 hour to obtain each cell extract as a supernatant. In order to purify MBP-UfSP2 and MBP-UfSP2 C249S, respectively, from each obtained cell extract, each cell extract was applied to an Amylose (Amylose, New England Biolabs, USA) column, eluted with 10 mM maltose solution, Each active fraction comprising -UfSP2 and MBP-UfSP2 C249S was obtained and electrophoresed to identify each protein.

그런 다음, MBP-UfSP2 및 MBP-UfSP2 C249S로부터 MBP를 분리하기 위하여, MBP와 UfSP2 사이를 절단할 수 있는 분해효소인 Factor Xa(Sigma Chem. Co., USA) 를 MBP-UfSP2 및 MBP-UfSP2 C249S 100mg당 1mg의 비율로 상기 활성분획에 혼합하고, 37℃에서 1시간동안 반응시킨 다음, 반응물을 25mM NaCl을 포함하는 투석용액(20mM Tris-HCl, pH 8.0)으로 투석한 후, 이를 DEAE-세파로즈(DEAE-Sepharose, Amersham Pharmacia, USA) 컬럼 크로마토그라피(이동상: 25-500mM NaCl을 포함하는 농도구배 투석용액)에 적용하여 UfSP2 및 UfSP2 C249S을 정제하였다. Then, in order to separate MBP from MBP-UfSP2 and MBP-UfSP2 C249S, Factor Xa (Sigma Chem. Co., USA), a cleavage enzyme capable of cleaving between MBP and UfSP2, was used for MBP-UfSP2 and MBP-UfSP2 C249S. After mixing to the active fraction in a ratio of 1mg per 100mg, and reacted for 1 hour at 37 ℃, the reaction was dialyzed with a dialysis solution containing 20mM NaCl (20mM Tris-HCl, pH 8.0), which was then DEAE-sepa UfSP2 and UfSP2 C249S were purified by application to Rose (DEAE-Sepharose, Amersham Pharmacia, USA) column chromatography (mobile phase: concentration gradient dialysis solution containing 25-500 mM NaCl).

실시예 4: UfSP2 및 UfSP2 C249S의 효소활성 측정 Example 4 Determination of Enzyme Activity of UfSP2 and UfSP2 C249S

실시예 4-1: Ufm1에 대한 UfSP2 및 UfSP2 C249S의 효소활성 측정 Example 4-1 Determination of Enzyme Activity of UfSP2 and UfSP2 C249S Against Ufm1

UfSP2 및 UfSP2 C249S이 GST-Ufm1-HA에 대해 단백질 효소활성을 갖고 있는지 확인하기 위하여, 반응 완충용액(100mM Tris-HCl, 1mM DTT, 1mM EDTA, 5%(v/v) 글리세롤, pH 7.8) 40㎕, 전기 실시예 3-2에서 정제한 UfSP2 1, 2, 3, 5㎍ 또는 UfSP2 C249S 5㎍ 및 GST-Ufm1-HA 1㎍을 혼합하고, 37℃에서 1시간 반응시킨 다음, 실시예 1과 동일한 방법으로 전기영동하여, Ufm1의 C-말단에 접합되어 있던 HA의 절단여부를 확인하였다. 이때, 대조군으로서 N-말단에 GST가 결합된 Ufm1를 사용하였다(참조: 도 2). To determine if UfSP2 and UfSP2 C249S have protease activity against GST-Ufm1-HA, reaction buffer (100 mM Tris-HCl, 1 mM DTT, 1 mM EDTA, 5% (v / v) glycerol, pH 7.8) 40 1 μl, UfSP2 1, 2, 3, 5 μg purified in Example 3-2 or 5 μg of UfSP2 C249S and 1 μg of GST-Ufm1-HA were mixed and reacted at 37 ° C. for 1 hour, followed by Example 1 Electrophoresis was carried out in the same manner to confirm the cleavage of the HA bonded to the C-terminus of Ufm1. In this case, Ufm1 having GST coupled to the N-terminus was used as a control (see FIG. 2).

도 2는 UfSP2 및 UfSP2 C249S로 GST-Ufm1-HA를 절단한 결과를 나타내는 전기영동사진으로, 레인 1은 대조군을 나타내고, 레인 2는 GST-Ufm1-HA를 나타내며, 레인 3은 1㎍의 GST-Ufm1-HA와 1㎍의 UfSP2의 반응결과를 나타내고, 레인 4은 1㎍의 GST-Ufm1-HA와 2㎍의 UfSP2의 반응결과를 나타내며, 레인 5은 1㎍의 GST-Ufm1-HA와 3㎍의 UfSP2의 반응결과를 나타내고, 레인 6은 1㎍의 GST-Ufm1-HA와 5㎍의 UfSP2의 반응결과를 나타내며, 레인 7은 1㎍의 GST-Ufm1-HA와 5㎍의 UfSP2 C249S의 반응결과를 나타낸다.Figure 2 is an electrophoresis picture showing the results of cleavage of GST-Ufm1-HA with UfSP2 and UfSP2 C249S, lane 1 represents the control, lane 2 represents GST-Ufm1-HA, lane 3 is 1 μg of GST- The reaction result of Ufm1-HA and 1 μg of UfSP2 is shown, and the lane 4 shows the reaction result of 1 μg of GST-Ufm1-HA and 2 μg of UfSP2. Lane 5 shows 1 μg of GST-Ufm1-HA and 3 μg. Shows the reaction result of UfSP2, lane 6 shows the reaction result of 1 μg GST-Ufm1-HA and 5 μg UfSP2, and lane 7 shows the reaction result of 1 μg GST-Ufm1-HA and 5 μg UfSP2 C249S. Indicates.

도 2에서 보듯이, UfSP2는 GST-Ufm1-HA에 결합된 HA를 절단할 수 있었으나(레인 3 내지 6), UfSP2 C249S는 GST-Ufm1-HA에 결합된 HA를 절단할 수 없음을 알 수 있었다(레인 7). 상기 도 2의 결과로부터, UfSP2의 249번째 아미노산이 UfSP2의 효소활성에 중요한 역할을 수행함을 알 수 있었고, Ufm1의 C-말단의 글리신을 UfSP2가 인식함을 알 수 있었다. As shown in FIG. 2, UfSP2 was able to cleave HA bound to GST-Ufm1-HA (lanes 3 to 6), but UfSP2 C249S was not able to cleave HA bound to GST-Ufm1-HA. (Lane 7). From the results of FIG. 2, it can be seen that the 249th amino acid of UfSP2 plays an important role in the enzymatic activity of UfSP2, and it can be seen that UfSP2 recognizes the C-terminal glycine of Ufm1.

실시예 4-2: 유비퀴틴 및 유비퀴틴-유사 단백질에 대한 UfSP2의 효소활성 측정 Example 4-2 Measurement of Enzyme Activity of UfSP2 on Ubiquitin and Ubiquitin-Like Proteins

먼저, 상기 실시예 1-1에서 작제한 GST-Ufm1-HA 단백질 이외에, 유비퀴틴(Ub) 및 유비퀴틴-유사 단백질인 SUMO-1과 ISG15을 포함하는 기질 단백질을 작제하기 위하여, Ufm1의 유전자 대신에 Ub, SUMO-1 또는 ISG15의 유전자를 사용하는 것을 제외하고는, 전기 실시예 1-1과 동일한 방법을 사용함으로써, GST-Ub-HA, GST-SUMO-1-HA 및 GST-ISG15-HA를 각각 제조하였다. First, in addition to the GST-Ufm1-HA protein constructed in Example 1-1, in order to construct a substrate protein including ubiquitin (Ub) and ubiquitin-like proteins SUMO-1 and ISG15, Ub1 instead of the gene of Ufm1 GST-Ub-HA, GST-SUMO-1-HA and GST-ISG15-HA, respectively, by using the same method as in Example 1-1, except that the gene of SUMO-1 or ISG15 was used. Prepared.

그런 다음, 효소로서 UfSP2를 사용하고, 기질로서 GST-Ufm1-HA, GST-Ub-HA, GST-SUMO-1-HA 또는 GST-ISG15-HA를 사용하는 것을 제외하고는, 전기 실시예 4-1과 동일한 방법으로 상기 각 기질에 대한 UfSP2의 효소활성을 측정하였다(참조: 도 3). 도 3은 UfSP2로 GST-Ufm1-HA, GST-Ub-HA, GST-SUMO-1-HA 또는 GST-ISG15-HA를 절단한 결과를 나타내는 전기영동사진이다. 도 3에서 보듯이, UfSP2은 GST-Ufm1-HA에 결합된 HA는 절단하였으나, GST-Ub-HA, GST-SUMO-1-HA 및 GST-ISG15-HA에 결합된 HA는 절단하지 못함을 알 수 있었다.Then, Example 4 was used, except that UfSP2 was used as the enzyme and GST-Ufm1-HA, GST-Ub-HA, GST-SUMO-1-HA or GST-ISG15-HA were used as substrates. In the same manner as in 1, the enzyme activity of UfSP2 on each substrate was measured (see FIG. 3). Figure 3 is an electrophoresis picture showing the result of cutting GST-Ufm1-HA, GST-Ub-HA, GST-SUMO-1-HA or GST-ISG15-HA with UfSP2. As shown in FIG. 3, UfSP2 cleaved HA bound to GST-Ufm1-HA, but not HA bound to GST-Ub-HA, GST-SUMO-1-HA and GST-ISG15-HA. Could.

상기 결과로부터, 본 발명의 UfSP2은 Ufm1의 C-말단을 특이적으로 절단하고 유비퀴틴이나 다른 유비퀴틴-유사 단백질들에 대해서는 효소활성을 나타내지 않는 Ufm1 특이적 단백질 분해효소임을 확인하였다. From the above results, it was confirmed that UfSP2 of the present invention is a Ufm1 specific protease that specifically cleaves the C-terminus of Ufm1 and does not exhibit enzymatic activity with respect to ubiquitin or other ubiquitin-like proteins.

이상에서 상세히 설명하고 입증하였듯이, 본 발명은 유비퀴틴-유사 단백질인 Ufm1 특이적인 단백질 분해효소인 Ufm1-특이적 단백질 분해효소(Ufm1-specific protease 2, UfSP2), 전기 효소를 암호화하는 유전자, 전기 유전자를 포함하는 발현 플라스미드, 전기 발현 플라스미드로 형질전환된 형질전환체 및 전기 형질전환체로부터 전기 효소를 생산하는 방법을 제공한다. 본 발명의 단백질 분해효소는 세포내 주요기작에 작용하는 단백질인 Ufm1에 특이적인 단백질 분해활성을 나타내므로, Ufm1이 관여하는 세포내 주요기작의 규명을 위한 연구에 널리 활용될 수 있 을 것이다.As described and demonstrated in detail above, the present invention relates to a Ufm1-specific protease Ufm1-specific protease (Ufm1-specific protease 2, UfSP2), a ubiquitin-like protein, a gene encoding an electric enzyme, and an electric gene. It provides an expression plasmid comprising, a transformant transformed with the electric expression plasmid and an electric enzyme from the electric transformant. Since the protease of the present invention exhibits proteolytic activity specific to Ufm1, which is a protein acting on intracellular major mechanisms, it will be widely used in studies for the identification of major intracellular mechanisms involving Ufm1.

서열목록 전자파일 첨부 Attach sequence list electronic file  

Claims (7)

서열번호 1의 아미노산 서열을 갖는 Ufm1-특이적 단백질 분해효소(Ufm1-specific protease 2, UfSP2).Ufm1-specific protease 2 (UfSP2) having the amino acid sequence of SEQ ID NO: 1. 서열번호 2의 염기서열을 갖고, 제 1항의 Ufm1-특이적 단백질 분해효소를 암호화하는 유전자.A gene having the nucleotide sequence of SEQ ID NO: 2 and encoding the Ufm1-specific protease of claim 1. 제 2항의 유전자를 포함하는 발현 플라스미드.An expression plasmid comprising the gene of claim 2. 제 3항에 있어서,The method of claim 3, wherein pMAL-c2X-UfSP2인 것을 특징으로 하는pMAL-c2X-UfSP2 발현 플라스미드.Expression plasmid. 제 3항 또는 제 4항의 발현 플라스미드로 형질전환된 형질전환체.A transformant transformed with the expression plasmid of claim 3. 제 5항에 있어서,The method of claim 5, pMAL-c2X-UfSP2로 대장균 BL21을 형질전환시킨 것을 특징으로 하는E. coli BL21 was transformed with pMAL-c2X-UfSP2 형질전환체.Transformants. 제 5항의 형질전환체를 배양하고, 배양된 균체로부터 Ufm1-특이적 단백질 분해효소(Ufm1-specific protease 2, UfSP2)를 수득하는 단계를 포함하는, UfSP2의 제조방법.A method for preparing UfSP2, comprising culturing the transformant of claim 5 and obtaining Ufm1-specific protease 2 (UfSP2) from the cultured cells.
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