JPH01228500A - Method for labeling nucleic acid with biotin using glutaraldehyde as a cross-linking agent - Google Patents

Method for labeling nucleic acid with biotin using glutaraldehyde as a cross-linking agent

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Publication number
JPH01228500A
JPH01228500A JP5432688A JP5432688A JPH01228500A JP H01228500 A JPH01228500 A JP H01228500A JP 5432688 A JP5432688 A JP 5432688A JP 5432688 A JP5432688 A JP 5432688A JP H01228500 A JPH01228500 A JP H01228500A
Authority
JP
Japan
Prior art keywords
biotin
nucleic acid
glutaraldehyde
dna
labeled
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
JP5432688A
Other languages
Japanese (ja)
Other versions
JP2647676B2 (en
Inventor
Akio Tsuji
辻 章夫
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Sankyo Co Ltd
Original Assignee
Sankyo Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Sankyo Co Ltd filed Critical Sankyo Co Ltd
Priority to JP5432688A priority Critical patent/JP2647676B2/en
Publication of JPH01228500A publication Critical patent/JPH01228500A/en
Application granted granted Critical
Publication of JP2647676B2 publication Critical patent/JP2647676B2/en
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

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  • Investigating Or Analysing Biological Materials (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

PURPOSE:To produce stable biotin-labeled probe by allowing nucleic acid with biotin hydrazide in the presence of glutaraldehyde. CONSTITUTION:Nucleic acid of double stranded DNA is boiled under heat, then cooled down to obtain single stranded DNA. The product is dissolved in an aqueous solvent to give a nucleic acid solution. Biotin hydrazide and glutaraldehyde as a crosslinking agent are added to the solution and they are allowed to react to give a reaction mixture. The reaction mixture is centrifuged, rinsed, and dried to give DNA labeled with biotin such as biotin-labeled gamma- phage (DNA).

Description

【発明の詳細な説明】 [産業上の利用分野コ 本発明は、核酸をビオチンで標識する新規な方法に関す
るものであり、−得られた標識化合物について核酸ハイ
ブリダイゼーションのプローブとして臨床分野における
診断法への利用を容易にしたものである。
DETAILED DESCRIPTION OF THE INVENTION [Industrial Field of Application] The present invention relates to a novel method for labeling nucleic acids with biotin, and uses the resulting labeled compound as a probe for nucleic acid hybridization in diagnostic methods in the clinical field. This makes it easier to use.

[従来の技術] 遺伝学的な問題の研究にあたって、特定の核酸を標識し
、それをL!3識することは非常に重要なことであるが
、従来最も広く使用されている方法は、Mfaを構成し
ている元素に放射性同位元素を使用する方法であるが、
この方法は標識化合物の製造、測定時等において人体へ
の影響を考慮すると、取り扱いに対して厳密な注意が必
要であり面倒であった。
[Prior art] When researching genetic problems, specific nucleic acids are labeled and labeled with L! It is very important to know that the most widely used method is to use radioactive isotopes for the elements that make up Mfa.
This method requires strict handling precautions and is troublesome, considering the effects on the human body during the production and measurement of labeled compounds.

そこで、非放射性プローブの使用が研究され始め、最近
ビオチンで核酸を標識する方法が開発された。ビオチン
を核酸に標識する方法としては、2′−デオキシウリジ
ン トリホスフェート 5−アリルアミン−ビオチン(
ビオチン−11−clUTP)を基質とするニックトラ
ンスレーションによる酵素法と5活性化試薬としてフォ
トビオチン[Photobiotin :N−(4−ア
ジド−2−二トロフェニル)−N−(Nd−ビオチニル
−3−アミノプロピル)−N−メチル−1,3−プロパ
ンヂアミン〕を用いて、化学的にm3aする方法が開発
されている。
Therefore, the use of non-radioactive probes has begun to be investigated, and a method for labeling nucleic acids with biotin has recently been developed. A method for labeling nucleic acids with biotin is 2'-deoxyuridine triphosphate 5-allylamine-biotin (
An enzymatic method using nick translation using biotin-11-clUTP as a substrate and photobiotin as an activation reagent. A chemical method for m3a has been developed using aminopropyl-N-methyl-1,3-propanediamine].

[発明が解決しようとする問題点コ フォトビオチンは非放射性の標識試薬としてその利用度
を高めてきているが、光等にたいする安定性に欠け、そ
の取扱が面倒である。
[Problems to be Solved by the Invention Cophotobiotin has been increasingly used as a non-radioactive labeling reagent, but it lacks stability against light and is difficult to handle.

またビオチン−11−dtJTPを用いる酵素法は標:
a法が複雑ある。そこで、簡単で安定性のある試薬を用
いて標識する方法の開発が望まれていた。
In addition, the enzymatic method using biotin-11-dtJTP is as follows:
The a method is complicated. Therefore, it has been desired to develop a labeling method using a simple and stable reagent.

[問題点を解決するための手段] 本発明者は、前記の要望を満たすべく鋭意研究を重ね、
安定なビオチン誘導体を架橋剤で核酸と結合させること
に想到して本発明を完成した。
[Means for Solving the Problems] The present inventor has conducted extensive research in order to satisfy the above-mentioned needs, and
The present invention was completed based on the idea of binding a stable biotin derivative to a nucleic acid using a crosslinking agent.

即ち1本発明の特徴は、ゲルタールアルデヒドの存在下
で核酸をビオチンヒドラジドと反応させることによって
、グルタールアルデヒドを架橋剤として核酸をビオチン
で標識する方法である。
That is, one feature of the present invention is a method of labeling a nucleic acid with biotin using glutaraldehyde as a crosslinking agent by reacting the nucleic acid with biotin hydrazide in the presence of glutaraldehyde.

本発明の方法を実施するにあたって1反応は核酸の溶解
性を考慮して水性媒質中で行なうのが好ましく、核酸は
DNA、RNAの何れでもよい。
In carrying out the method of the present invention, one reaction is preferably carried out in an aqueous medium in consideration of the solubility of the nucleic acid, and the nucleic acid may be either DNA or RNA.

本発明は、核酸を水に溶がし、これにビオチンヒドラジ
ドとグルタールアルデヒドとを加えて反応させることに
よって、容易に実施できるが、二本鎖のDNAの場合に
は反応に先だって、加熱煮沸し、冷却して一本鎖にし、
しかるのち反応に供せられせられる。
The present invention can be easily carried out by dissolving nucleic acids in water, adding biotin hydrazide and glutaraldehyde to the solution, and reacting. However, in the case of double-stranded DNA, prior to the reaction, heating and boiling and cooled to form a single strand.
It is then subjected to a reaction.

反応終了後、目的とする標識されたプローブは常法によ
って採取し保存される。例えば反応終了後、冷却した反
応液中に沈殿した標識プローブを遠心等の分離方法で単
離し、洗浄し乾燥後保存される。また、迅速に行うとき
は、セファデックスG−25カラム等により分離精製で
きる。
After the reaction is completed, the labeled probe of interest is collected and stored by a conventional method. For example, after the reaction is completed, the labeled probe precipitated in the cooled reaction solution is isolated by a separation method such as centrifugation, washed, dried, and stored. Moreover, when carrying out quickly, separation and purification can be performed using a Sephadex G-25 column or the like.

こうして得られたプローブは、ハイブリダイゼーション
後、アビジンを結合した被測定物質例えば酵素等と反応
させることによって定量することができる。[実施例] 以下に実施例を挙げて本発明をさらに具体的に説明する
が、本発明はこれによって限定されるものではない。
After hybridization, the thus obtained probe can be quantified by reacting with an avidin-bound analyte, such as an enzyme. [Example] The present invention will be described in more detail with reference to Examples below, but the present invention is not limited thereto.

実施例1 プローブの調製法(ビオチンによるDNAの
標識) DNAの水溶液(1μg/μ1)25μlを95℃で5
分間煮沸し、次いで5分間水中冷却する。
Example 1 Probe preparation method (labeling of DNA with biotin) 25 μl of an aqueous DNA solution (1 μg/μ1) was incubated at 95°C for 5 minutes.
Boil for minutes, then cool in water for 5 minutes.

これにビオチンヒドラジドの水溶液(IOB/ll1l
)12.5μl及びグルタールアルデヒドの水溶液(5
%)15μlを加え、37℃で10分間反応させた。次
に3M酢酸ソーダ5.83μlとエタノール146μl
を加え、−40℃で一夜放置した。生じた沈殿を遠心分
離(小型卓上遠心器10.00Orρl。
Add to this an aqueous solution of biotin hydrazide (IOB/11
) 12.5 μl and an aqueous solution of glutaraldehyde (5
%) was added and reacted at 37°C for 10 minutes. Next, 5.83 μl of 3M sodium acetate and 146 μl of ethanol.
was added and left at -40°C overnight. The resulting precipitate was centrifuged (small tabletop centrifuge 10.00 Orρl).

10分)L、、80%エタノールで洗浄し、減圧デシケ
ータ−中で真空乾燥して保存するか、若しくは0.0℃
M EDTA水溶液50μmを加えて溶かし、4℃で保
存した。
10 minutes) Wash with 80% ethanol, vacuum dry in a vacuum desiccator and store, or at 0.0°C.
50 μm of M EDTA aqueous solution was added to dissolve and stored at 4°C.

上記方法に従ってビオチン標識λ−ファージ(DNA)
を製造した。
Biotin-labeled λ-phage (DNA) according to the above method
was manufactured.

参考例 λ−ファージDNAのハイブリダイゼーション ハイブリダイゼーションは111便で定量化ができるマ
イクロタイタープレート法で行った・ l)プレハイブリダイゼーション溶液の調製10XSS
Cs、z=t、0.06xPVP & 0.06%Fi
coLl(膨潤剤) 2.6ml、0.32%ウシ血清
アルブミン2.6ml、水2.47 ml、及び変性ウ
シ胸腺DNA(Σ社D−1501) 0.13m1(最
終濃度50 iL g/m1)を混合した。
Reference example Hybridization of λ-phage DNA Hybridization was performed using a microtiter plate method that allows quantification in 111 stools. l) Preparation of prehybridization solution 10XSS
Cs, z=t, 0.06xPVP & 0.06%Fi
coLl (swelling agent) 2.6 ml, 0.32% bovine serum albumin 2.6 ml, water 2.47 ml, and denatured bovine thymus DNA (Sigma D-1501) 0.13 ml (final concentration 50 iL g/ml) were mixed.

2)ハイブリダイゼーション溶液の調製10XSSC5
,2n+1.0.06xPVP & 0.06%Fic
ol12.6n+1.0.32%ウシ血清アルブミン2
.6I11.5部デキストラン硫酸2.6m1.変性ウ
シ胸腺DNA0.13m1(最終濃度50μg/ml)
、及び実施例1で得られたビオチン標識λ−ファージD
NAプローブ溶液25μlを混合した。
2) Preparation of hybridization solution 10XSSC5
,2n+1.0.06xPVP & 0.06%Fic
ol12.6n+1.0.32% bovine serum albumin 2
.. 11.5 parts of 6I 2.6 ml of dextran sulfate. Denatured calf thymus DNA 0.13ml (final concentration 50μg/ml)
, and biotin-labeled λ-phage D obtained in Example 1.
25 μl of NA probe solution was mixed.

4)ハイブリダイゼーション λ−ファージDNAを水に溶かし、5分間煮沸して一本
鎖とし、0.1M塩化マグネシウムを含むリン酸緩衝液
で希釈し、200μmづつウェルに加え、−夜4℃に放
置することによリウエルにファージを固定した。
4) Hybridization λ-Phage DNA was dissolved in water, boiled for 5 minutes to make it a single strand, diluted with phosphate buffer containing 0.1M magnesium chloride, added to wells of 200 μm each, and left at 4°C overnight. The phages were immobilized on Rewell by this method.

ウェルから未固定のλ−ファージを取り除き、これに上
記プレハイブリダイゼーション溶液200μmを加え、
プレートシールでプレートをカバーし、プラスチックバ
ッグに入れ65℃の水浴上に浮かべ1時間反応させる。
Remove unfixed λ-phage from the wells, add 200 μm of the above prehybridization solution,
Cover the plate with a plate seal, place it in a plastic bag, float it on a 65°C water bath, and incubate for 1 hour.

反応後プレハイブリダイゼーション溶液を吸引除去し、
ハイブリダイゼーション溶液200μmを加え、−夜6
5℃で反応させた。洗浄は2 X5SC200μlで6
5℃、30分で1回、及び0.05M リン酸緩衝液2
00μmで3回行った。
After the reaction, remove the prehybridization solution by suction,
Add 200μm of hybridization solution - night 6
The reaction was carried out at 5°C. Wash 6 times with 200μl of 2X5SC.
5°C, 30 min once, and 0.05M phosphate buffer 2
The test was carried out three times at 00 μm.

5) D N Aの定量 上記のようにして得られたハイブリダイズしたビオチン
標識DNAにアビヂン結合アルカリホスファターゼ溶液
(パイオーイエダ社製) (20000倍希釈溶液)1
00μmを加え、室温で2時間反応させた後、生理食塩
水で3回洗浄した。これにNADP溶液(3Bを0.0
5MDEA緩衝液20m1に溶解)100μlを加え室
温で1時間反応させた。次に酵素溶液[0,25M リ
ン酸緩衝液中ADH0,08mg/+Ill、エタノー
ル0.375%、l−MPMS 1.25X10−5M
)ヲ加えて室温で2G分間反応させた。反応停止は0.
2M硫M 50μmで行い、その反応液lOμmを使用
して化学発光illり定した。
5) Quantification of DNA Avidin-conjugated alkaline phosphatase solution (manufactured by Paio Ieda) (20,000-fold diluted solution) 1 to the hybridized biotin-labeled DNA obtained as above
After adding 00 μm and reacting at room temperature for 2 hours, the plate was washed three times with physiological saline. Add NADP solution (3B to 0.0
100 μl of 5MDEA buffer (dissolved in 20 ml) was added and reacted at room temperature for 1 hour. Then the enzyme solution [0.08 mg/+ Ill of ADH in 0.25 M phosphate buffer, 0.375% ethanol, l-MPMS 1.25X10-5 M
) was added and reacted for 2G minutes at room temperature. Reaction termination is 0.
Chemiluminescence illumination was determined using 10 μm of the reaction solution.

反応液10μ)をガラスチューブにとり、これに比/m
−POD混液(2,4X 10−’M/I X 10−
’M、 0.4M炭酸緩衝液pH9,5) 200μl
を加え、生じた発光をアロカルミネッセンスリーダー(
待ち時間15秒、積算時間6秒)で測定した。
Transfer 10μ of the reaction solution to a glass tube and add the ratio/m
-POD mixture (2,4X 10-'M/I X 10-
'M, 0.4M carbonate buffer pH 9,5) 200μl
was added, and the resulting luminescence was converted into an alloluminescence reader (
The measurement was performed with a waiting time of 15 seconds and an integration time of 6 seconds).

このようにして得られたλ−ファージDNAの検量線は
第1図に示した通りであり、検量域はtopg〜5n匹
であった。
The calibration curve of the λ-phage DNA thus obtained was as shown in FIG. 1, and the calibration range was from topg to 5n mice.

[発明の効果] 本発明は、核酸をビオチンで標識する新規な方法であり
、これにより安定なビオチン標識プローブが得られた。
[Effects of the Invention] The present invention is a novel method for labeling nucleic acids with biotin, and thereby a stable biotin-labeled probe was obtained.

このプローブを使用し、化学発光測定法によって核酸の
定量すると、非常に感度の高い測定を行うことができた
When this probe was used to quantify nucleic acids by chemiluminescence measurement, very sensitive measurements were possible.

【図面の簡単な説明】[Brief explanation of the drawing]

第1図は本発明の方法によって得られたビオチン標識λ
−ファージDNAプローブを使用して検出されたえ一フ
ァージDNAの検量線であり、縦軸は発光強度(カウン
ト/6秒)を示し、横軸はλ−ファージDNAの量(p
g/ウェル)を示す。
Figure 1 shows biotin-labeled λ obtained by the method of the present invention.
- A standard curve of phage DNA detected using a phage DNA probe, where the vertical axis shows the luminescence intensity (counts/6 seconds) and the horizontal axis shows the amount of λ-phage DNA (p
g/well).

Claims (1)

【特許請求の範囲】[Claims] 1、グルタールアルデヒドの存在下で核酸をビオチンヒ
ドラジドと反応させることを特徴とするグルタールアル
デヒドを架橋剤とする核酸へのビオチンの標識法。
1. A method for labeling a nucleic acid with biotin using glutaraldehyde as a crosslinking agent, which comprises reacting the nucleic acid with biotin hydrazide in the presence of glutaraldehyde.
JP5432688A 1988-03-08 1988-03-08 Labeling of biotin to nucleic acids using glutaraldehyde as a cross-linking agent Expired - Lifetime JP2647676B2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
JP5432688A JP2647676B2 (en) 1988-03-08 1988-03-08 Labeling of biotin to nucleic acids using glutaraldehyde as a cross-linking agent

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
JP5432688A JP2647676B2 (en) 1988-03-08 1988-03-08 Labeling of biotin to nucleic acids using glutaraldehyde as a cross-linking agent

Publications (2)

Publication Number Publication Date
JPH01228500A true JPH01228500A (en) 1989-09-12
JP2647676B2 JP2647676B2 (en) 1997-08-27

Family

ID=12967466

Family Applications (1)

Application Number Title Priority Date Filing Date
JP5432688A Expired - Lifetime JP2647676B2 (en) 1988-03-08 1988-03-08 Labeling of biotin to nucleic acids using glutaraldehyde as a cross-linking agent

Country Status (1)

Country Link
JP (1) JP2647676B2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5700935A (en) * 1994-12-22 1997-12-23 Nisshinbo Industries, Inc. Carbodiimide derivative

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5700935A (en) * 1994-12-22 1997-12-23 Nisshinbo Industries, Inc. Carbodiimide derivative
US5789588A (en) * 1994-12-22 1998-08-04 Nisshinbo Industries, Inc. Carbodiimide derivative

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Publication number Publication date
JP2647676B2 (en) 1997-08-27

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