JP6687605B2 - 配列決定プロセス - Google Patents

配列決定プロセス Download PDF

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JP6687605B2
JP6687605B2 JP2017513371A JP2017513371A JP6687605B2 JP 6687605 B2 JP6687605 B2 JP 6687605B2 JP 2017513371 A JP2017513371 A JP 2017513371A JP 2017513371 A JP2017513371 A JP 2017513371A JP 6687605 B2 JP6687605 B2 JP 6687605B2
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nucleic acid
template nucleic
molecular tag
sequence
acid molecules
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JP2017517282A (ja
JP2017517282A5 (show.php
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マリー バーク，キャサリン
マリー バーク，キャサリン
アール ダーリング，アーロン
アール ダーリング，アーロン
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ロンガス テクノロジーズ ピーティーワイ リミテッド
ロンガス テクノロジーズ ピーティーワイ リミテッド
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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
    • C12Q2565/50—Detection characterised by immobilisation to a surface
    • C12Q2565/514—Detection characterised by immobilisation to a surface characterised by the use of the arrayed oligonucleotides as identifier tags, e.g. universal addressable array, anti-tag or tag complement array

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
JP2017513371A 2014-05-23 2015-05-22 配列決定プロセス Active JP6687605B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GB1409282.9 2014-05-23
GBGB1409282.9A GB201409282D0 (en) 2014-05-23 2014-05-23 Sequencing process
PCT/GB2015/051518 WO2015177570A1 (en) 2014-05-23 2015-05-22 Sequencing process

Publications (3)

Publication Number Publication Date
JP2017517282A JP2017517282A (ja) 2017-06-29
JP2017517282A5 JP2017517282A5 (show.php) 2018-08-16
JP6687605B2 true JP6687605B2 (ja) 2020-04-22

Family

ID=51177418

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2017513371A Active JP6687605B2 (ja) 2014-05-23 2015-05-22 配列決定プロセス

Country Status (12)

Country Link
US (2) US11047002B2 (show.php)
EP (1) EP3146070B2 (show.php)
JP (1) JP6687605B2 (show.php)
KR (3) KR102363284B1 (show.php)
CN (2) CN116072218A (show.php)
AU (1) AU2015263055B2 (show.php)
CA (1) CA2949925A1 (show.php)
DK (1) DK3146070T5 (show.php)
ES (1) ES2697804T5 (show.php)
GB (1) GB201409282D0 (show.php)
SG (1) SG11201609754QA (show.php)
WO (1) WO2015177570A1 (show.php)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3465502B1 (en) 2016-05-26 2024-04-10 Becton, Dickinson and Company Molecular label counting adjustment methods
KR102790039B1 (ko) 2016-11-08 2025-04-04 벡톤 디킨슨 앤드 컴퍼니 세포 표지 분류 방법
EP3539035B1 (en) 2016-11-08 2024-04-17 Becton, Dickinson and Company Methods for expression profile classification
KR101798229B1 (ko) * 2016-12-27 2017-12-12 주식회사 천랩 전장 리보솜 rna 서열정보를 얻는 방법 및 상기 리보솜 rna 서열정보를 이용하여 미생물을 동정하는 방법
JP7171709B2 (ja) * 2017-09-20 2022-11-15 ライフ テクノロジーズ コーポレイション 圧縮分子タグ付き核酸配列データを用いた融合の検出のための方法
US20190095578A1 (en) * 2017-09-25 2019-03-28 Cellular Research, Inc. Immune receptor-barcode error correction
SG11202001858PA (en) * 2017-10-09 2020-04-29 Psomagen Inc Single molecule sequencing and unique molecular identifiers to characterize nucleic acid sequences
JPWO2019132010A1 (ja) * 2017-12-28 2021-01-21 タカラバイオ株式会社 塩基配列における塩基種を推定する方法、装置及びプログラム
EP3620539B1 (en) 2018-08-10 2026-01-14 Tata Consultancy Services Limited Method and system for improving amplicon sequencing based taxonomic resolution of microbial communities
KR102892179B1 (ko) * 2018-08-13 2025-11-26 일루미나 싱가포르 피티이 엘티디 시퀀싱 알고리즘
WO2025255494A1 (en) 2024-06-07 2025-12-11 Illumina, Inc. Identifying the origin of amplified rna molecules

Family Cites Families (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0960215A1 (en) * 1997-01-15 1999-12-01 Brax Genomics Limited Nucleic acid sequencing
JP4403069B2 (ja) * 2002-08-12 2010-01-20 独立行政法人理化学研究所 クローニングおよび分析のためのｍＲＮＡの５’末端の使用方法
JP4413017B2 (ja) * 2004-01-15 2010-02-10 独立行政法人理化学研究所 クラスタリングプログラムおよびクラスタリング装置
US20090142758A1 (en) 2005-06-23 2009-06-04 Keygene N V Strategies for sequencing complex genomes using high throughput sequencing technologies
MX2009000044A (es) * 2006-06-30 2009-01-23 Ambit Bios Corp Etiqueta de acido nucleico detectable.
CN102656279A (zh) 2009-12-17 2012-09-05 凯津公司 基于全基因组测序的限制性酶
BR112012032586B1 (pt) 2010-06-30 2021-08-17 Bgi Genomics Co., Ltd Métodos para determinar a sequência nucleotídica de um ácido nucléico de interesse e para determinar o genótipo hla em uma amostra
US9033273B2 (en) 2010-11-02 2015-05-19 Jonathan Edelson Integrated aircraft ground navigation control system
EP3246416B1 (en) 2011-04-15 2024-06-05 The Johns Hopkins University Safe sequencing system
EP2710172B1 (en) * 2011-05-20 2017-03-29 Fluidigm Corporation Nucleic acid encoding reactions
US11177020B2 (en) 2012-02-27 2021-11-16 The University Of North Carolina At Chapel Hill Methods and uses for molecular tags
DK2828218T3 (da) 2012-03-20 2020-11-02 Univ Washington Through Its Center For Commercialization Methods of lowering the error rate of massively parallel dna sequencing using duplex consensus sequencing
WO2013163263A2 (en) 2012-04-24 2013-10-31 Gen9, Inc. Methods for sorting nucleic acids and multiplexed preparative in vitro cloning
EP2898071A4 (en) 2012-09-21 2016-07-20 Broad Inst Inc COMPOSITIONS AND METHODS FOR LONG-TERM LABORATORIES AND PREPARED END OF NUCLEIC ACIDS IN EMULSION DROPS

Also Published As

Publication number Publication date
AU2015263055A1 (en) 2016-12-08
WO2015177570A1 (en) 2015-11-26
EP3146070A1 (en) 2017-03-29
US20210403991A1 (en) 2021-12-30
KR102363284B1 (ko) 2022-02-15
KR20230141873A (ko) 2023-10-10
DK3146070T5 (en) 2019-01-21
KR20170012390A (ko) 2017-02-02
GB201409282D0 (en) 2014-07-09
JP2017517282A (ja) 2017-06-29
KR102579902B1 (ko) 2023-09-18
CN107002120B (zh) 2022-08-09
KR20220025213A (ko) 2022-03-03
CA2949925A1 (en) 2015-11-26
ES2697804T5 (es) 2024-11-25
CN107002120A (zh) 2017-08-01
EP3146070B2 (en) 2024-07-31
SG11201609754QA (en) 2016-12-29
CN116072218A (zh) 2023-05-05
ES2697804T3 (es) 2019-01-28
US11047002B2 (en) 2021-06-29
US20170183724A1 (en) 2017-06-29
AU2015263055B2 (en) 2020-12-03
EP3146070B1 (en) 2018-09-26
KR102864537B1 (ko) 2025-09-24
DK3146070T3 (en) 2019-01-07

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