JP2025515452A - Ｄｎａデータ・ストレージのためのコーデック - Google Patents
Ｄｎａデータ・ストレージのためのコーデック Download PDFInfo
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- JP2025515452A JP2025515452A JP2024562211A JP2024562211A JP2025515452A JP 2025515452 A JP2025515452 A JP 2025515452A JP 2024562211 A JP2024562211 A JP 2024562211A JP 2024562211 A JP2024562211 A JP 2024562211A JP 2025515452 A JP2025515452 A JP 2025515452A
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- Japan
- Prior art keywords
- cases
- pool
- synthesis
- combination
- polynucleotides
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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Classifications
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- G—PHYSICS
- G11—INFORMATION STORAGE
- G11C—STATIC STORES
- G11C13/00—Digital stores characterised by the use of storage elements not covered by groups G11C11/00, G11C23/00, or G11C25/00
- G11C13/0002—Digital stores characterised by the use of storage elements not covered by groups G11C11/00, G11C23/00, or G11C25/00 using resistive RAM [RRAM] elements
- G11C13/0009—RRAM elements whose operation depends upon chemical change
- G11C13/0014—RRAM elements whose operation depends upon chemical change comprising cells based on organic memory material
- G11C13/0019—RRAM elements whose operation depends upon chemical change comprising cells based on organic memory material comprising bio-molecules
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- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06F—ELECTRIC DIGITAL DATA PROCESSING
- G06F12/00—Accessing, addressing or allocating within memory systems or architectures
- G06F12/02—Addressing or allocation; Relocation
- G06F12/0223—User address space allocation, e.g. contiguous or non contiguous base addressing
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
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- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/27—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes using interleaving techniques
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- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/29—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes combining two or more codes or code structures, e.g. product codes, generalised product codes, concatenated codes, inner and outer codes
- H03M13/2906—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes combining two or more codes or code structures, e.g. product codes, generalised product codes, concatenated codes, inner and outer codes using block codes
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- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06F—ELECTRIC DIGITAL DATA PROCESSING
- G06F2212/00—Indexing scheme relating to accessing, addressing or allocation within memory systems or architectures
- G06F2212/20—Employing a main memory using a specific memory technology
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- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/03—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words
- H03M13/05—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words using block codes, i.e. a predetermined number of check bits joined to a predetermined number of information bits
- H03M13/11—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words using block codes, i.e. a predetermined number of check bits joined to a predetermined number of information bits using multiple parity bits
- H03M13/1102—Codes on graphs and decoding on graphs, e.g. low-density parity check [LDPC] codes
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- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/03—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words
- H03M13/05—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words using block codes, i.e. a predetermined number of check bits joined to a predetermined number of information bits
- H03M13/13—Linear codes
-
- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/03—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words
- H03M13/05—Error detection or forward error correction by redundancy in data representation, i.e. code words containing more digits than the source words using block codes, i.e. a predetermined number of check bits joined to a predetermined number of information bits
- H03M13/13—Linear codes
- H03M13/15—Cyclic codes, i.e. cyclic shifts of codewords produce other codewords, e.g. codes defined by a generator polynomial, Bose-Chaudhuri-Hocquenghem [BCH] codes
- H03M13/151—Cyclic codes, i.e. cyclic shifts of codewords produce other codewords, e.g. codes defined by a generator polynomial, Bose-Chaudhuri-Hocquenghem [BCH] codes using error location or error correction polynomials
- H03M13/1515—Reed-Solomon codes
-
- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/29—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes combining two or more codes or code structures, e.g. product codes, generalised product codes, concatenated codes, inner and outer codes
- H03M13/2957—Turbo codes and decoding
-
- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/37—Decoding methods or techniques, not specific to the particular type of coding provided for in groups H03M13/03 - H03M13/35
- H03M13/39—Sequence estimation, i.e. using statistical methods for the reconstruction of the original codes
-
- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M13/00—Coding, decoding or code conversion, for error detection or error correction; Coding theory basic assumptions; Coding bounds; Error probability evaluation methods; Channel models; Simulation or testing of codes
- H03M13/47—Error detection, forward error correction or error protection, not provided for in groups H03M13/01 - H03M13/37
-
- H—ELECTRICITY
- H03—ELECTRONIC CIRCUITRY
- H03M—CODING; DECODING; CODE CONVERSION IN GENERAL
- H03M7/00—Conversion of a code where information is represented by a given sequence or number of digits to a code where the same, similar or subset of information is represented by a different sequence or number of digits
- H03M7/001—Conversion of a code where information is represented by a given sequence or number of digits to a code where the same, similar or subset of information is represented by a different sequence or number of digits characterised by the elements used
Landscapes
- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Physics & Mathematics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Theoretical Computer Science (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- General Engineering & Computer Science (AREA)
- Immunology (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Biotechnology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Probability & Statistics with Applications (AREA)
- General Physics & Mathematics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Detection And Correction Of Errors (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (7)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US202263333305P | 2022-04-21 | 2022-04-21 | |
| US63/333,305 | 2022-04-21 | ||
| US202263338760P | 2022-05-05 | 2022-05-05 | |
| US63/338,760 | 2022-05-05 | ||
| US202363481873P | 2023-01-27 | 2023-01-27 | |
| US63/481,873 | 2023-01-27 | ||
| PCT/US2023/019283 WO2023205345A2 (en) | 2022-04-21 | 2023-04-20 | Codecs for dna data storage |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| JP2025515452A true JP2025515452A (ja) | 2025-05-15 |
| JP2025515452A5 JP2025515452A5 (cg-RX-API-DMAC7.html) | 2026-04-14 |
Family
ID=88420548
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2024562211A Pending JP2025515452A (ja) | 2022-04-21 | 2023-04-20 | Ｄｎａデータ・ストレージのためのコーデック |
Country Status (8)
| Country | Link |
|---|---|
| US (1) | US20250335346A1 (cg-RX-API-DMAC7.html) |
| EP (1) | EP4511836A4 (cg-RX-API-DMAC7.html) |
| JP (1) | JP2025515452A (cg-RX-API-DMAC7.html) |
| KR (1) | KR20250013161A (cg-RX-API-DMAC7.html) |
| CN (1) | CN119948568A (cg-RX-API-DMAC7.html) |
| AU (1) | AU2023255494A1 (cg-RX-API-DMAC7.html) |
| CA (1) | CA3249936A1 (cg-RX-API-DMAC7.html) |
| WO (1) | WO2023205345A2 (cg-RX-API-DMAC7.html) |
Families Citing this family (8)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CA3131689A1 (en) | 2019-02-26 | 2020-09-03 | Twist Bioscience Corporation | Variant nucleic acid libraries for glp1 receptor |
| CN115023440B (zh) | 2019-09-23 | 2025-09-12 | 特韦斯特生物科学公司 | 结合CD3ε的抗体 |
| US12091777B2 (en) | 2019-09-23 | 2024-09-17 | Twist Bioscience Corporation | Variant nucleic acid libraries for CRTH2 |
| AU2020400030B2 (en) | 2019-12-09 | 2026-05-21 | Twist Bioscience Corporation | Variant nucleic acid libraries for adenosine receptors |
| WO2022159620A1 (en) | 2021-01-21 | 2022-07-28 | Twist Bioscience Corporation | Methods and compositions relating to adenosine receptors |
| US12258406B2 (en) | 2021-03-24 | 2025-03-25 | Twist Bioscience Corporation | Antibodies that bind CD3 Epsilon |
| EP4433085A2 (en) | 2021-11-18 | 2024-09-25 | Twist Bioscience Corporation | Dickkopf-1 variant antibodies and methods of use |
| CN118193453B (zh) * | 2024-03-14 | 2025-10-03 | 中国科学院深圳先进技术研究院 | 一种适用于pb级数据dna存储的系统及编解码方法 |
Family Cites Families (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8190977B2 (en) * | 2008-08-27 | 2012-05-29 | Intel Mobile Communications GmbH | Decoder of error correction codes |
| US11093547B2 (en) * | 2018-06-19 | 2021-08-17 | Intel Corporation | Data storage based on encoded DNA sequences |
| US11017170B2 (en) * | 2018-09-27 | 2021-05-25 | At&T Intellectual Property I, L.P. | Encoding and storing text using DNA sequences |
| US12260937B2 (en) * | 2019-09-05 | 2025-03-25 | Microsoft Technology Licensing, Llc | Reverse concatenation of error-correcting codes in DNA data storage |
-
2023
- 2023-04-20 JP JP2024562211A patent/JP2025515452A/ja active Pending
- 2023-04-20 WO PCT/US2023/019283 patent/WO2023205345A2/en not_active Ceased
- 2023-04-20 US US18/858,085 patent/US20250335346A1/en active Pending
- 2023-04-20 EP EP23792538.3A patent/EP4511836A4/en active Pending
- 2023-04-20 AU AU2023255494A patent/AU2023255494A1/en active Pending
- 2023-04-20 CA CA3249936A patent/CA3249936A1/en active Pending
- 2023-04-20 CN CN202380048529.8A patent/CN119948568A/zh active Pending
- 2023-04-20 KR KR1020247038593A patent/KR20250013161A/ko active Pending
Also Published As
| Publication number | Publication date |
|---|---|
| WO2023205345A2 (en) | 2023-10-26 |
| WO2023205345A3 (en) | 2023-11-30 |
| US20250335346A1 (en) | 2025-10-30 |
| AU2023255494A1 (en) | 2024-12-05 |
| CN119948568A (zh) | 2025-05-06 |
| KR20250013161A (ko) | 2025-01-31 |
| CA3249936A1 (en) | 2023-10-26 |
| EP4511836A4 (en) | 2026-04-15 |
| EP4511836A2 (en) | 2025-02-26 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| A521 | Request for written amendment filed |
Free format text: JAPANESE INTERMEDIATE CODE: A523 Effective date: 20260406 |
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| A621 | Written request for application examination |
Free format text: JAPANESE INTERMEDIATE CODE: A621 Effective date: 20260406 |