JP2023547973A5 - - Google Patents

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Publication number
JP2023547973A5
JP2023547973A5 JP2022575435A JP2022575435A JP2023547973A5 JP 2023547973 A5 JP2023547973 A5 JP 2023547973A5 JP 2022575435 A JP2022575435 A JP 2022575435A JP 2022575435 A JP2022575435 A JP 2022575435A JP 2023547973 A5 JP2023547973 A5 JP 2023547973A5
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JP
Japan
Prior art keywords
read sequence
nucleic acid
acid sequencing
sequencing device
base
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JP2022575435A
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English (en)
Japanese (ja)
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JP7810664B2 (ja
JP2023547973A (ja
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Priority claimed from PCT/US2021/058364 external-priority patent/WO2022099097A1/en
Publication of JP2023547973A publication Critical patent/JP2023547973A/ja
Publication of JP2023547973A5 publication Critical patent/JP2023547973A5/ja
Application granted granted Critical
Publication of JP7810664B2 publication Critical patent/JP7810664B2/ja
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JP2022575435A 2020-11-05 2021-11-05 質スコア圧縮 Active JP7810664B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US202063110308P 2020-11-05 2020-11-05
US63/110,308 2020-11-05
PCT/US2021/058364 WO2022099097A1 (en) 2020-11-05 2021-11-05 Quality score compression

Publications (3)

Publication Number Publication Date
JP2023547973A JP2023547973A (ja) 2023-11-15
JP2023547973A5 true JP2023547973A5 (https=) 2024-11-13
JP7810664B2 JP7810664B2 (ja) 2026-02-03

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Family Applications (1)

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JP2022575435A Active JP7810664B2 (ja) 2020-11-05 2021-11-05 質スコア圧縮

Country Status (12)

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US (4) US11527307B2 (https=)
EP (1) EP4241276A1 (https=)
JP (1) JP7810664B2 (https=)
KR (1) KR20230101760A (https=)
CN (1) CN115668384A (https=)
AU (1) AU2021376411A1 (https=)
BR (1) BR112022025042A2 (https=)
CA (1) CA3174208A1 (https=)
IL (2) IL298981B2 (https=)
MX (1) MX2022016020A (https=)
WO (1) WO2022099097A1 (https=)
ZA (2) ZA202304367B (https=)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2022099097A1 (en) * 2020-11-05 2022-05-12 Illumina, Inc. Quality score compression
JP2022086403A (ja) * 2020-11-30 2022-06-09 キオクシア株式会社 メモリシステム及び情報処理システム
EP4490735A1 (en) 2022-03-08 2025-01-15 Illumina Inc Multi-pass software-accelerated genomic read mapping engine
US11775172B1 (en) * 2022-05-05 2023-10-03 CELLGENTEK Corp. Genome data compression and transmission method for FASTQ-formatted genome data
CN115662525B (zh) * 2022-10-25 2026-04-21 湖南大学 一种测序fastq文件质量分数序列的稀疏化处理方法

Family Cites Families (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20100205204A1 (en) 2007-03-02 2010-08-12 Research Organization Of Information And Systems Homology retrieval system, homology retrieval apparatus, and homology retrieval method
US10090857B2 (en) * 2010-04-26 2018-10-02 Samsung Electronics Co., Ltd. Method and apparatus for compressing genetic data
US20110288785A1 (en) * 2010-05-18 2011-11-24 Translational Genomics Research Institute (Tgen) Compression of genomic base and annotation data
AU2012272161B2 (en) * 2011-06-21 2015-12-24 Illumina Cambridge Limited Methods and systems for data analysis
US10777301B2 (en) * 2012-07-13 2020-09-15 Pacific Biosciences For California, Inc. Hierarchical genome assembly method using single long insert library
US10847251B2 (en) * 2013-01-17 2020-11-24 Illumina, Inc. Genomic infrastructure for on-site or cloud-based DNA and RNA processing and analysis
WO2014197377A2 (en) * 2013-06-03 2014-12-11 Good Start Genetics, Inc. Methods and systems for storing sequence read data
WO2016081712A1 (en) * 2014-11-19 2016-05-26 Bigdatabio, Llc Systems and methods for genomic manipulations and analysis
CN107851118A (zh) * 2015-05-21 2018-03-27 基因福米卡数据系统有限公司 下一代测序数据的存储、传输和压缩
JP6949970B2 (ja) 2016-10-11 2021-10-13 ゲノムシス エスアー バイオインフォマティクスデータを送信する方法及びシステム
CN110021349B (zh) * 2017-07-31 2021-02-02 北京哲源科技有限责任公司 基因数据的编码方法
CN110111852A (zh) * 2018-01-11 2019-08-09 广州明领基因科技有限公司 一种海量dna测序数据无损快速压缩平台
CN110797082A (zh) * 2019-10-24 2020-02-14 福建和瑞基因科技有限公司 基因测序数据的存储读取方法及系统
WO2022099097A1 (en) 2020-11-05 2022-05-12 Illumina, Inc. Quality score compression

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