JP2022533145A - 生体分子を標識するためのタグ - Google Patents
生体分子を標識するためのタグ Download PDFInfo
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- JP2022533145A JP2022533145A JP2021568372A JP2021568372A JP2022533145A JP 2022533145 A JP2022533145 A JP 2022533145A JP 2021568372 A JP2021568372 A JP 2021568372A JP 2021568372 A JP2021568372 A JP 2021568372A JP 2022533145 A JP2022533145 A JP 2022533145A
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Abstract
Description
参照による組込み
元素タグ
コンジュゲート
用途
方法
タグの調製
コンジュゲートの調製
キット
(実施例1)
官能性ブロックの合成
1.1. NCA-誘導体(アジド-NCA、アルキニル-NCAおよび官能性前駆体NCA)の合成
1.1.1. アジド-NCAの合成
1.1.2. アルキニル-NCAの合成
1.1.3. 官能性前駆体NCAの合成
1.2. 官能基化DOTA-誘導体(アルキニル-DOTA-(tBu)およびアジド-DOTA-(tBu))の合成
1.2.1. アルキニル-DOTA-(tBu)の合成
1.2.2. アジド-DOTA-(tBu)の合成
(実施例2)
主鎖の調製
b).計算された分子量は、[M]0/[I]0の比および変換率に従い計算した。
c).ポリマーの絶対分子量およびPDIは、溶媒としてDMFを使用するGPCから求めた。
d).変換率は、1H-NMR分光法から求めた。
2.2. アジド-NCAからのアジド-ポリペプチドの合成
2.3. 官能性前駆体NCAからのアジド-ポリペプチドの合成
(実施例3)
ペンダント基の修飾
(実施例4)
脱保護
(実施例5)
末端基修飾
(実施例6)
金属タグの調製
(実施例7)
生体分子のアジドによる事前官能基化
(実施例8)
銅不含クリック反応によるアジドで事前官能基化されている生体分子との金属標識したポリペプチドのコンジュゲート
(実施例9)
本開示の元素タグとコンジュゲートされている抗体を使用することによる、細胞表面マーカーの定量
Claims (125)
- 生体分子を標識するためのタグであって、前記生体分子に化学量論的に結合することが可能な末端基で終わるポリマー主鎖、および前記ポリマー主鎖にそれぞれが結合しており、かつ元素とキレート形成することが可能な1つまたは複数のペンダント部分を含む、タグ。
- 前記タグが生体適合性である、請求項1に記載のタグ。
- 前記ポリマー主鎖が、ポリペプチド、ポリペプトイド、ポリβ-ペプチド、ポリγ-ペプチド、ポリδ-ペプチドおよびそれらの誘導体からなる群から選択される、請求項1または2に記載のタグ。
- 前記ポリマー主鎖が、ホモポリマーまたはコポリマーである、請求項1から3のいずれか一項に記載のタグ。
- 前記ポリマー主鎖が、NCA、NTAα-アミノ酸、β-アミノ酸、γ-アミノ酸、δ-アミノ酸、N-置換アミノ酸およびそれらの誘導体からなる群から選択されるモノマーの重合によって形成される、請求項1から4のいずれか一項に記載のタグ。
- 前記N-置換アミノ酸が、N-置換グリシンである、請求項5に記載のタグ。
- 前記ポリマー主鎖の重合度が、10~1000の間である、請求項5または6に記載のタグ。
- 前記ポリマー主鎖の重合度が、50~300の間である、請求項7に記載のタグ。
- 前記ポリマー主鎖が、1.4未満の多分散指数を有する、請求項1から8のいずれか一項に記載のタグ。
- 前記ペンダント部分が、金属またはその同位体とキレート形成することが可能である、請求項1から9のいずれか一項に記載のタグ。
- 前記ポリマー主鎖に結合している前記ペンダント部分の数が、10~1000の間である、請求項1から10のいずれか一項に記載のタグ。
- 前記ポリマー主鎖に結合している前記ペンダント部分の数が、50~300の間である、請求項11に記載のタグ。
- 前記ペンダント部分が、EDTA、DTPA、DCTA、DOTA、TETA、NOTAおよびそれらの誘導体からなる群から選択される、請求項1から12のいずれか一項に記載のタグ。
- 前記ペンダント部分が、DOTAまたはDTPAから選択される、請求項13に記載のタグ。
- 前記1つまたは複数のペンダント部分がそれぞれ、前記ポリマー主鎖に直接、結合している、請求項1から14のいずれか一項に記載のタグ。
- 前記1つまたは複数のペンダント部分がそれぞれ、リンカーを介して、前記ポリマー主鎖に結合している、請求項1から14のいずれか一項に記載のタグ。
- 前記リンカーが、1,2,3-トリアゾール基を含む、請求項16に記載のタグ。
- 前記リンカーが、スペーサーを介して、前記ポリマー主鎖または前記ペンダント部分に結合している、請求項16または17に記載のタグ。
- 前記スペーサーが、アルキル基またはポリエチレングリコール基である、請求項18に記載のタグ。
- 前記末端基が、前記ポリマー主鎖のN末端に結合している、請求項1から19のいずれか一項に記載のタグ。
- 前記末端基がアジド反応性基を含む、請求項1から20のいずれか一項に記載のタグ。
- 前記アジド反応性基が、シクロオクチンまたはその誘導体である、請求項21に記載のタグ。
- 前記末端基が、スペーサーを介して、前記ポリマー主鎖に結合している、請求項1から22のいずれか一項に記載のタグ。
- 前記スペーサーが、アルキル基またはポリエチレングリコール基である、請求項23に記載のタグ。
- 生体分子を標識するためのタグであって、前記生体分子に結合することが可能な末端基で終わるポリマー主鎖、および前記ポリマー主鎖にそれぞれが結合しており、かつ元素とキレート形成することが可能な1つまたは複数のペンダント部分を含み、生体適合性である、タグ。
- 前記ポリマー主鎖が、ポリペプチド、ポリペプトイド、ポリβ-ペプチド、ポリγ-ペプチド、ポリδ-ペプチドおよびそれらの誘導体からなる群から選択される、請求項25に記載のタグ。
- 前記ポリマー主鎖が、ホモポリマーまたはコポリマーである、請求項25または26に記載のタグ。
- 前記ポリマー主鎖が、NCA、NTA、α-アミノ酸、β-アミノ酸、γ-アミノ酸、δ-アミノ酸、N-置換アミノ酸およびそれらの誘導体からなる群から選択されるモノマーの重合によって形成される、請求項25から27のいずれか一項に記載のタグ。
- 前記N-置換アミノ酸が、N-置換グリシンである、請求項28に記載のタグ。
- 前記ポリマー主鎖の重合度が、10~1000の間である、請求項28または29に記載のタグ。
- 前記ポリマー主鎖の重合度が、100~300の間である、請求項30に記載のタグ。
- 前記ポリマー主鎖が、1.4未満の多分散指数を有する、請求項25から31のいずれか一項に記載のタグ。
- 前記ポリマー主鎖に結合している前記ペンダント部分の数が、10~1000の間である、請求項25から32のいずれか一項に記載のタグ。
- 前記ポリマー主鎖に結合している前記ペンダント部分の数が、50~300の間である、請求項33に記載のタグ。
- 前記ペンダント部分が、EDTA、DTPA、DCTA、DOTA、TETA、NOTA、およびそれらの誘導体からなる群から選択される、請求項25から34のいずれか一項に記載のタグ。
- 前記ペンダント部分が、DOTAまたはDTPAから選択される、請求項35に記載のタグ。
- 前記1つまたは複数のペンダント部分がそれぞれ、前記ポリマー主鎖に直接、結合している、請求項25から36のいずれか一項に記載のタグ。
- 前記1つまたは複数のペンダント部分がそれぞれ、リンカーを介して、前記ポリマー主鎖に結合している、請求項25から36のいずれか一項に記載のタグ。
- 前記リンカーが、1,2,3-トリアゾール基を含む、請求項38に記載のタグ。
- 前記リンカーが、スペーサーを介して、前記ポリマー主鎖または前記ペンダント部分に結合している、請求項25から39のいずれか一項に記載のタグ。
- 前記スペーサーが、アルキル基またはポリエチレングリコール基である、請求項40に記載のタグ。
- 生体分子を標識するためのタグであって、前記生体分子に結合することが可能な末端基で終わるポリマー主鎖、および前記ポリマー主鎖の繰り返し単位にそれぞれが化学量論的に結合しており、かつ元素とキレート形成することが可能な1つまたは複数のペンダント部分を含む、タグ。
- 前記ペンダント部分が、金属またはその同位体とキレート形成することが可能である、請求項42に記載のタグ。
- 前記ポリマー主鎖に結合している前記ペンダント部分の数が、10~1000の間である、請求項42または43に記載のタグ。
- 前記ポリマー主鎖に結合している前記ペンダント部分の数が、50~300の間である、請求項44に記載のタグ。
- 前記ペンダント部分が、EDTA、DTPA、DCTA、DOTA、TETA、NOTA、およびそれらの誘導体からなる群から選択される、請求項42から45のいずれか一項に記載のタグ。
- 前記ペンダント部分が、DOTAまたはDTPAから選択される、請求項46に記載のタグ。
- 前記1つまたは複数のペンダント部分がそれぞれ、前記ポリマー主鎖に直接、結合している、請求項42から48のいずれか一項に記載のタグ。
- 前記1つまたは複数のペンダント部分がそれぞれ、リンカーを介して、前記ポリマー主鎖に結合している、請求項42から48のいずれか一項に記載のタグ。
- 前記リンカーが、1,2,3-トリアゾール基を含む、請求項49に記載のタグ。
- 前記リンカーが、スペーサーを介して、前記ポリマー主鎖または前記ペンダント部分に結合している、請求項49または50に記載のタグ。
- 前記スペーサーが、アルキル基またはポリエチレングリコール基である、請求項51に記載のタグ。
- 請求項1から52のいずれか一項に記載のタグを含む、生体分子を標識するための元素タグであって、前記ポリマー主鎖に結合している前記ペンダント部分が元素とキレート形成する、元素タグ。
- 前記元素が金属またはその同位体である、請求項53に記載の元素タグ。
- 前記金属が、La、Lu、Pr、Nd、Pm、Sm、Eu、Gd、Tb、Dy、Ho、Er、Tm、Yb、Lu、Hf、Ta、W、Re、Os、Ir、Pt、Au、Hg、Tl、Pb、Bi、Po、At、Rn、Fr、Ra、Ac、Th、Pa、U、Np、Pu、Am、Cm、Bk、Cf、Es、Fm、Md、No、Lr、Rf、Db、Sg、Bh、Hs、Mt、Ds、Rg、Cn、Nh、Fl、Mc、Lv、Ts、Ogおよびそれらの同位体からなる群から選択される、請求項54に記載の元素タグ。
- 前記金属が、60より大きな質量を有する、請求項54または55に記載の元素タグ。
- 前記金属がランタニド金属またはその同位体である、請求項54から56のいずれか一項に記載の元素タグ。
- 前記ランタニド金属が、La、Lu、Pr、Nd、Pm、Sm、Eu、Gd、Tb、Dy、Ho、Er、Tm、Yb、Luまたはそれらの同位体である、請求項57に記載の元素タグ。
- 請求項1から52のいずれか一項に記載のタグとカップリングされている生体分子を含む、元素分析のためのコンジュゲート。
- 前記生体分子が、前記タグとのカップリング前に、前記タグとの共有結合に好適な基で事前官能基化されている、請求項59に記載のコンジュゲート。
- 前記生体分子が、1つまたは複数のアジド基により事前官能基化されている、請求項60に記載のコンジュゲート。
- 前記生体分子が、ペプチド、タンパク質、アプタマー、抗体、酵素、炭水化物、核酸、デオキシリボ核酸、オリゴヌクレオチド、ポリペプチド、組換えタンパク質、リボ核酸脂質およびそれらの誘導体からなる群から選択される、請求項59~61のいずれか一項に記載のコンジュゲート。
- 前記抗体が、モノクローナル抗体、ポリクローナル抗体、抗体断片、Fab断片、Fc断片、軽鎖、重鎖、免疫グロブリンおよび免疫グロブリン断片からなる群から選択される、請求項62に記載のコンジュゲート。
- 前記コンジュゲートが、1つまたは複数の元素とさらにキレート形成している、請求項59から63のいずれか一項に記載のコンジュゲート。
- 前記コンジュゲートとキレート形成する前記元素の数が、10~1000の間である、請求項64に記載のコンジュゲート。
- 前記コンジュゲートとキレート形成する前記元素の数が、50~300の間である、請求項65に記載のコンジュゲート。
- 前記元素が金属またはその同位体である、請求項64から66のいずれか一項に記載のコンジュゲート。
- 前記金属が、60より大きな質量を有する、請求項67に記載のコンジュゲート。
- 前記金属が、ランタニド金属またはその同位体である、請求項67または68に記載のコンジュゲート。
- 前記ランタニド金属が、La、Lu、Pr、Nd、Pm、Sm、Eu、Gd、Tb、Dy、Ho、Er、Tm、Yb、Luまたはそれらの同位体である、請求項69に記載のコンジュゲート。
- 元素分析に使用するための、請求項64から70のいずれか一項に記載のコンジュゲート。
- 前記元素分析がMSである、請求項71に記載のコンジュゲート。
- 前記MSが、ICP-MSまたはICP-TOF-MSである、請求項72に記載のコンジュゲート。
- ポリマー主鎖を得るステップ
元素とキレート形成することが可能な1つまたは複数のペンダント部分を前記ポリマー主鎖に結合させるステップ、および
生体分子に結合することが可能な末端基を前記ポリマー主鎖の一方の末端に結合させるステップ
を含む、請求項1から52のいずれか一項に記載のタグを調製する方法。 - 前記ポリマー主鎖が、ホモポリマーまたはコポリマーとして得られる、請求項74に記載の方法。
- 前記ポリマー主鎖が、10~1000個のモノマーの重合によって得られる、請求項74または75に記載の方法。
- 前記ポリマー主鎖が、50~300個のモノマーの重合によって得られる、請求項76に記載の方法。
- 前記ポリマー主鎖が、NCA、NTA、α-アミノ酸、β-アミノ酸、γ-アミノ酸、δ-アミノ酸、N-置換アミノ酸およびそれらの誘導体からなる群から選択されるモノマーの重合によって得られる、請求項74から77のいずれか一項に記載の方法。
- 前記N-置換アミノ酸が、N-置換グリシンである、請求項78に記載の方法。
- 前記モノマーが、重合前に事前官能基化される、請求項76から79のいずれか一項に記載の方法。
- 前記モノマーが、アジド基で事前官能基化される、請求項80に記載の方法。
- 前記モノマーが、アルキニル基で事前官能基化される、請求項80に記載の方法。
- 前記ペンダント部分が、EDTA、DTPA、DCTA、DOTA、TETA、NOTAおよびそれらの誘導体からなる群から選択される、請求項74から82のいずれか一項に記載の方法。
- 前記ペンダント部分が、DOTAまたはDTPAである、請求項83に記載の方法。
- 前記ペンダント部分が、前記ポリマー主鎖に結合させる前に事前官能基化される、請求項74から84のいずれか一項に記載の方法。
- 前記ペンダント部分が、アジド基で事前官能基化される、請求項85に記載の方法。
- 前記ペンダント部分が、アルキニル基で事前官能基化される、請求項85に記載の方法。
- 前記ペンダント部分を前記ポリマー主鎖に結合させるステップの前に、前記ペンダント部分を保護するステップをさらに含む、請求項74から87のいずれか一項に記載の方法。
- 前記ペンダント部分が、メチルエステル、ベンジルエステル、tert-ブチルエステル、2,6-二置換フェノールのエステル、シリルエステル、オルトエステルまたはオキサゾリンから選択される基によって保護される、請求項88に記載の方法。
- 前記ペンダント部分が、クリック反応により、前記ポリマー主鎖に結合される、請求項74から89のいずれか一項に記載の方法。
- 前記クリック反応が、銅触媒クリック反応である、請求項90に記載の方法。
- 前記ペンダント部分を前記ポリマー主鎖に結合させるステップの前に、元素を前記ペンダント部分とキレート形成させるステップをさらに含む、請求項74から91のいずれか一項に記載の方法。
- 前記ペンダント部分を前記ポリマー主鎖に結合させるステップの後に、元素を前記ペンダント部分とキレート形成させるステップをさらに含む、請求項74から91のいずれか一項に記載の方法。
- 前記末端基を前記ポリマー主鎖に結合させるステップの前に、元素を前記タグの前記ペンダント部分とキレート形成させるステップをさらに含む、請求項74から91のいずれか一項に記載の方法。
- 前記末端基を前記ポリマー主鎖に結合させるステップの後に、元素を前記タグの前記ペンダント部分とキレート形成させるステップをさらに含む、請求項74から91のいずれか一項に記載の方法。
- 前記ペンダント部分とキレート形成する前記元素の数が、10~1000である、請求項92から95のいずれか一項に記載の方法。
- 前記ペンダント部分とキレート形成する前記元素の数が、50~300である、請求項96に記載の方法。
- 前記元素とキレート形成させるステップの前に、前記ペンダント部分を脱保護するステップをさらに含む、請求項92から97のいずれか一項に記載の方法。
- (i)生体分子を事前官能基化するステップ、および
(ii)請求項1から52のいずれか一項に記載のタグを前記生体分子に接触させるステップ
を含む、元素分析のためのコンジュゲートを調製する方法。 - 前記生体分子が、銅不含クリック反応によって前記タグの前記末端基にカップリングされる、請求項99に記載の方法。
- 前記生体分子が、1つまたは複数のアジド基により事前官能基化される、請求項99または100に記載の方法。
- 前記生体分子が、ペプチド、タンパク質、アプタマー、抗体、酵素、炭水化物、核酸、デオキシリボ核酸、オリゴヌクレオチド、ポリペプチド、組換えタンパク質、リボ核酸脂質およびそれらの誘導体からなる群から選択される、請求項99から101のいずれか一項に記載の方法。
- 前記生体分子が抗体であり、前記事前官能基化が、1つまたは複数のGalNAz基を前記抗体の1つまたは複数のグリカン鎖に組み込むことによって行われる、請求項99から102のいずれか一項に記載の方法。
- 前記事前官能基化が、4つのGalNAz基を前記抗体の前記グリカン鎖に組み込むことによって行われる、請求項103に記載の方法。
- 前記生体分子がオリゴヌクレオチドであり、前記事前官能基化が、1つまたは複数のアジド修飾されているホスホロアミダイトを前記オリゴヌクレオチドに組み込むことによって行われる、請求項99から102のいずれか一項に記載の方法。
- 前記生体分子がペプチドであり、前記事前官能基化が、1つまたは複数のアジド修飾されているアミノ酸を前記ペプチドに組み込むことによって行われる、請求項99から102のいずれか一項に記載の方法。
- 元素を前記コンジュゲートとキレート形成させるステップをさらに含む、請求項99から106のいずれか一項に記載の方法。
- 前記タグを前記生体分子とカップリングさせる前に、前記キレート形成が行われる、請求項107に記載の方法。
- 前記タグを前記生体分子とカップリングさせた後に、前記キレート形成が行われる、請求項107に記載の方法。
- (i)試料を請求項64から73のいずれか一項に記載のコンジュゲートに接触させるステップであって、前記コンジュゲートの前記生体分子が、前記試料中の分析物に特異的に結合する、ステップ、および
(ii)前記コンジュゲート中の前記元素の量を元素分析により求めることによって前記分析物を定量するステップ
を含む、試料中の分析物を定量する方法。 - 前記元素分析が、ICP-MSまたはICP-TOF-MSを用いて行われる、請求項110に記載の方法。
- 前記コンジュゲートの前記生体分子が、別のタグによりさらに標識される、請求項110または111に記載の方法。
- 前記分析物に結合している前記コンジュゲートを分離するステップをさらに含む、請求項110から112のいずれか一項に記載の方法。
- 前記試料が被験体から得られる、請求項110から113のいずれか一項に記載の方法。
- 前記試料が体液または組織である、請求項114に記載の方法。
- 前記体液が、全血、血漿、血清、尿、滲出液、腹水、唾液、脳脊髄液、子宮頸分泌物、膣分泌物、子宮内膜分泌物、羊水、消化管分泌物、痰を含む気管支分泌物、乳汁および分泌物からなる群から選択される、請求項115に記載の方法。
- 前記組織が、乳房組織、子宮組織、子宮頸部組織、腸組織、結腸直腸組織、食道組織、前立腺組織、肺組織、心臓組織、筋組織、皮膚組織、腎臓組織、角膜組織、肝臓組織、腹部組織、リンパ組織、脳組織、結合組織、軟部組織および骨からなる群から選択される、請求項115に記載の方法。
- 前記組織が腫瘍組織である、請求項115に記載の方法。
- 前記分析物が、細胞、核酸およびタンパク質からなる群から選択される、請求項110から118のいずれか一項に記載の方法。
- 前記細胞が腫瘍細胞である、請求項119に記載の方法。
- (i)請求項1から52のいずれか一項に記載のタグ、および
(ii)キットを使用するための指示書
を含むキット。 - (i)請求項1から52のいずれか一項に記載のタグ、
(ii)生体分子を事前官能基化するためのアジド試薬、および
(iii)キットを使用するための指示書
を含むキット。 - 前記生体分子をさらに含む、請求項122に記載のキット。
- 前記タグを前記生体分子とカップリングさせるための触媒をさらに含む、請求項121から123のいずれか一項に記載のキット。
- 金属溶液を含む、請求項121から124のいずれか一項に記載のキット。
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