JP2013153736A - Single strand nucleic acid molecule having peptide skeleton - Google Patents

Abstract

PROBLEM TO BE SOLVED: To provide a new nucleic acid molecule allowing easy production method thereof with good efficiency, and inhibiting the expression of a gene.SOLUTION: This single strand nucleic molecule including an expression inhibitory sequence inhibiting the expression of a target gene, includes a region (X), a linker region (Lx) and a region (Xc). The linker region (Lx) is connected between the region (Xc) and region (Xc). The region (Xc) is complemental to the region (X). At least one of the region (X) and region (Xc) includes the expression inhibitory sequence, and the linker region (Lx) includes a peptide structure. By the single strand nucleic molecule, the expression of the target gene can be inhibited.

Description

  The present invention relates to a single-stranded nucleic acid molecule that suppresses gene expression, and more particularly to a single-stranded nucleic acid molecule having a peptide backbone, a composition containing the same, and use thereof.

  As a technique for suppressing gene expression, for example, RNA interference (RNAi) is known (Non-Patent Document 1). Inhibition of gene expression by RNA interference is generally performed, for example, by administering a short double-stranded RNA molecule to a cell or the like. The double-stranded RNA molecule is usually called siRNA (small interfering RNA). In addition to this, it has been reported that gene expression can also be suppressed by a circular RNA molecule that is partially double-stranded by intramolecular annealing (Patent Document 1).

Fire et al., Nature, 1998 Feb 19; 391 (6669): 806-11

US Publication No. 2004-058886

  However, in each of the above methods, RNA molecules that induce gene expression suppression have the following problems.

  First, when producing the siRNA, a step of synthesizing the sense strand and the antisense strand separately and finally hybridizing these strands is necessary. For this reason, there exists a problem that manufacturing efficiency is bad. Moreover, since it is necessary to administer the siRNA to cells in a state in which dissociation into single-stranded RNA is suppressed, it takes effort to set the handling conditions. Next, in the case of a circular RNA molecule, there is a problem that its synthesis is difficult.

  Moreover, these RNA molecules are basically composed of nucleotide residues. In addition, in the case where a certain function or label is imparted to the RNA molecule, for example, there is no choice but to modify a base, a sugar residue or a phosphate group that is a component of a nucleotide residue. For this reason, in the development of pharmaceuticals and the like using RNA interference, it is extremely difficult to modify further functions and labeling while maintaining the gene expression suppression function.

  Therefore, an object of the present invention is to provide a new nucleic acid molecule that can be produced easily and efficiently and can suppress gene expression.

  In order to achieve the above object, the nucleic acid molecule of the present invention is a single-stranded nucleic acid molecule comprising an expression suppressing sequence that suppresses the expression of a target gene, and comprises a region (X), a linker region (Lx), and a region (Xc). ), The linker region (Lx) is connected between the region (X) and the region (Xc), the region (Xc) is complementary to the region (X), and the region At least one of (X) and the region (Xc) includes the expression suppression sequence, and the linker region (Lx) includes a peptide structure.

  The first composition of the present invention is a composition for suppressing the expression of a target gene, and comprises the single-stranded nucleic acid molecule of the present invention.

  The 2nd composition of this invention is pharmaceutical composition, Comprising: The said single stranded nucleic acid molecule of this invention is characterized by the above-mentioned.

  The expression suppression method of the present invention is a method of suppressing the expression of a target gene, characterized by using the single-stranded nucleic acid molecule of the present invention.

  The expression induction method of the present invention is a method of inducing RNA interference that suppresses the expression of a target gene, and is characterized by using the single-stranded nucleic acid molecule of the present invention.

  The method for treating a disease of the present invention includes a step of administering the single-stranded nucleic acid molecule of the present invention to a patient, wherein the single-stranded nucleic acid molecule serves as the expression-suppressing sequence of a gene causing the disease. It has a sequence that suppresses expression.

  The single-stranded nucleic acid molecule of the present invention can suppress gene expression and is not circular, so its synthesis is easy, and since it is single-stranded, there is no double-stranded annealing step. Can be manufactured efficiently. In addition, since the linker region includes the non-nucleotide residue, for example, it is not limited to the conventional modification of nucleotide residues, and for example, modification such as modification in the linker region can be performed.

  The present inventors are the first to find that the structure of a single-stranded nucleic acid molecule of the present invention can suppress gene expression. The gene expression suppression effect of the single-stranded nucleic acid molecule of the present invention is presumed to be due to the same phenomenon as RNA interference, but gene expression suppression in the present invention is not limited or limited to RNA interference.

It is a schematic diagram which shows an example of the single stranded nucleic acid molecule of this invention. It is a schematic diagram which shows the other example of the single stranded nucleic acid molecule of this invention. It is a schematic diagram which shows the other example of the single stranded nucleic acid molecule of this invention. FIG. 4 is a graph showing the relative value of GAPDH gene expression level in the examples of the present invention. FIG. 5 is a diagram showing ssRNA used in Reference Examples. FIG. 6 is a graph showing relative values of GAPDH gene expression levels in Reference Examples. FIG. 7 is a graph showing the relative value of the expression level of TGF-β1 gene in Reference Example. FIG. 8 is a graph showing the relative value of the expression level of the LAMA gene in the reference example. FIG. 9 is a graph showing the relative value of the expression level of the LMNA gene in the reference example. FIG. 10 is a diagram showing ssRNA used in Reference Examples. FIG. 11 is a graph showing the relative value of GAPDH gene expression level in Reference Examples.

  The terms used in this specification can be used in the meaning normally used in the art unless otherwise specified.

1. The ssPN molecule The single-stranded nucleic acid molecule of the present invention is a single-stranded nucleic acid molecule containing an expression suppressing sequence that suppresses the expression of a target gene as described above, and includes a region (X), a linker region (Lx), and a region The linker region (Lx) is connected between the region (X) and the region (Xc), and the region (Xc) is complementary to the region (X), At least one of the region (X) and the region (Xc) includes the expression suppression sequence, and the linker region (Lx) includes a peptide structure.

  In the present invention, “target gene expression suppression” means, for example, inhibiting the expression of the target gene. The suppression mechanism is not particularly limited, and may be, for example, down regulation or silencing. The suppression of the expression of the target gene can be achieved, for example, by reducing the production amount of the transcription product from the target gene, reducing the activity of the transcription product, reducing the production amount of the translation product from the target gene, or activity of the translation product. It can be confirmed by decrease of Examples of the protein include a mature protein or a precursor protein before undergoing processing or post-translational modification.

  Hereinafter, the single-stranded nucleic acid molecule of the present invention is also referred to as “ssPN molecule” of the present invention. Since the ssPN molecule of the present invention can be used for suppression of target gene expression, for example, in vivo or in vitro, it is also referred to as “target gene expression suppression ssPN molecule” or “target gene expression inhibitor”. In addition, since the ssPN molecule of the present invention can suppress the expression of the target gene by, for example, RNA interference, “ssNP molecule for RNA interference”, “ssPN molecule for RNA interference induction” or “RNA interference agent or RNA interference induction” It is also called “agent”. In addition, the present invention can suppress side effects such as interferon induction.

  The 5 'end and 3' end of the ssPN molecule of the present invention are unlinked, and can also be referred to as a linear single-stranded nucleic acid molecule.

  In the ssPN molecule of the present invention, the expression suppressing sequence is, for example, a sequence exhibiting an activity of suppressing the expression of the target gene when the ssPN molecule of the present invention is introduced into a cell in vivo or in vitro. is there. The expression suppression sequence is not particularly limited, and can be appropriately set according to the type of target gene of interest. As the expression suppressing sequence, for example, a sequence involved in RNA interference by siRNA can be appropriately applied. In RNA interference, generally, a long double-stranded RNA (dsRNA) is cleaved by a dicer into a double-stranded RNA (siRNA: small interfering RNA) of about 19 to 21 base pairs with a 3 ′ end protruding in a cell. This is a phenomenon in which one single-stranded RNA binds to a target mRNA and degrades the mRNA, thereby suppressing translation of the mRNA. Various types of single-stranded RNA sequences in the siRNA that bind to the target mRNA have been reported, for example, depending on the type of target gene. In the present invention, for example, a single-stranded RNA sequence of the siRNA can be used as the expression suppression sequence.

  The present invention relates to the structure of a nucleic acid molecule for allowing the expression suppression activity of the target gene by the expression suppression sequence to function in the cell, for example, not the point of the sequence information of the expression suppression sequence for the target gene. . Therefore, in the present invention, for example, in addition to the siRNA single-stranded RNA sequence known at the time of filing, a sequence that will become clear in the future can be used as the expression-suppressing sequence.

  For example, the expression suppressing sequence preferably has 90% or more complementarity with respect to a predetermined region of the target gene, more preferably 95%, still more preferably 98%, Preferably it is 100%. By satisfying such complementarity, for example, off-target can be sufficiently reduced.

As a specific example, when the target gene is a GAPDH gene, for example, the 19-base long sequence shown in SEQ ID NO: 5 can be used as the expression suppression sequence. When the target gene is TGF-β1, for example, the 21-base sequence shown in SEQ ID NO: 17 can be used as the expression-suppressing sequence. When the target gene is the LAMA1 gene, the expression-suppressing sequence is, for example, SEQ ID NO: 18 When the target gene is the LMNA gene, for example, the 19-base sequence shown in SEQ ID NO: 19 can be used.
5′-GUUGUCAUACUUCUCAUGG-3 ′ (SEQ ID NO: 5)
5′-AAAGUCAAUGUACAGCUGCUU-3 ′ (SEQ ID NO: 17)
5′-AUUGUAACGAGACAAACAC-3 ′ (SEQ ID NO: 18)
5′-UUGCGCUUUUUGGUGACGC-3 ′ (SEQ ID NO: 19)

  The suppression of the expression of the target gene by the ssPN molecule of the present invention is presumed to be caused by, for example, RNA interference. Note that the present invention is not limited by this mechanism. The ssPN molecule of the present invention is not introduced into a cell or the like as a dsRNA consisting of two single-stranded RNAs, for example, so-called siRNA. Not necessarily required. For this reason, it can also be said that the ssPN molecule of the present invention has, for example, an RNA interference-like function.

  The ssPN molecule of the present invention can suppress side effects such as interferon induction in a living body and is excellent in nuclease resistance.

  The linker region may include, for example, only a non-nucleotide residue having the non-nucleotide structure, or may include a non-nucleotide residue having the non-nucleotide structure and a nucleotide residue.

In the linker region, the “peptide structure” is not particularly limited. For example, it is an atomic group represented by the following formula (IA).

In the formula (IA), for example,
X ¹ is H ₂ , O, S or NH;
The atomic group A is optional, but includes a peptide bond. The peptide bond may be one or more, and each peptide bond may be an acid amide bond or an acid imide bond.

In the ssPN molecule of the present invention, the linker region (Lx) is represented, for example, by the following formula (I).

In the formula (I), for example,
X ¹ and X ² are each independently H ₂ , O, S or NH;
Y ¹ and Y ² are each independently a single bond, CH ₂ , NH, O or S;
L ¹ is an alkylene chain having n carbon atoms, and a hydrogen atom on the alkylene carbon atom is substituted with OH, OR ^a , NH ₂ , NHR ^a , NR ^a R ^b , SH, or SR ^a May not be substituted, or
L ¹ is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ¹ is NH, O or S, the atom of L ¹ bonded to Y ¹ is carbon, the atom of L ¹ bonded to OR ¹ is carbon, and oxygen atoms are not adjacent to each other;
L ² is an alkylene chain having m carbon atoms, and a hydrogen atom on the alkylene carbon atom may be substituted with OH, OR ^c , NH ₂ , NHR ^c , NR ^c R ^d , SH or SR ^c. May not be substituted, or
L ² is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ² is NH, O or S, the atom of L ² bonded to Y ² is carbon, the atom of L ² bonded to OR ² is carbon, and oxygen atoms are not adjacent to each other;
R ^a , R ^b , R ^c and R ^d are each independently a substituent or a protecting group;
m is an integer in the range of 0-30;
n is an integer in the range of 0-30;
The region (Xc) and the region (X) each bind to the linker region (Lx) via —OR ¹ — or —OR ² —,
Wherein R ¹ and R ² may or may not be present, and when present, R ¹ and R ² are each independently a nucleotide residue or the structure (I);
Pe is an arbitrary atomic group including a peptide bond, provided that the following formula (Ia) is a peptide.

In the formula (I), X ¹ and X ² are each independently, for example, H ₂ , O, S or NH. In the formula (I), X ¹ being H ₂ means that X ¹ together with the carbon atom to which X ¹ is bonded forms CH ₂ (methylene group). The same is true for X ^2.

In the formula (I), Y ¹ and Y ² are each independently a single bond, CH ₂ , NH, O or S.

In the formula (I), L ¹ is an alkylene chain having n carbon atoms. The hydrogen atom on the alkylene carbon atom may be substituted with, for example, OH, OR ^a , NH ₂ , NHR ^a , NR ^a R ^b , SH, or SR ^a , or may not be substituted. Alternatively, L ¹ may be a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom. The polyether chain is, for example, polyethylene glycol. When Y ¹ is NH, O or S, the atom of L ¹ bonded to Y ¹ is carbon, the atom of L ¹ bonded to OR ¹ is carbon, and oxygen atoms are not adjacent to each other. That is, for example, when Y ¹ is O, the oxygen atom and the oxygen atom of L ¹ are not adjacent, and the oxygen atom of OR ^{1 and} the oxygen atom of L ¹ are not adjacent.

In the formula (I), L ² is an alkylene chain having m carbon atoms. The hydrogen atom on the alkylene carbon atom may be substituted with, for example, OH, OR ^c , NH ₂ , NHR ^c , NR ^c R ^d , SH or SR ^c , or may not be substituted. Alternatively, L ² may be a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom. When Y ² is NH, O or S, the L ² atom bonded to Y ² is carbon, the L ² atom bonded to OR ² is carbon, and oxygen atoms are not adjacent to each other. That is, for example, when Y ² is O, the oxygen atom and the oxygen atom of L ² are not adjacent, and the oxygen atom of OR ^{2 and} the oxygen atom of L ² are not adjacent.

N in L ¹ and m in L ² are not particularly limited, and the lower limit is, for example, 0, and the upper limit is not particularly limited. n and m can be appropriately set depending on, for example, the desired length of the linker region (Lx). n and m are each preferably from 0 to 30, more preferably from 0 to 20, and even more preferably from 0 to 15 from the viewpoints of production cost and yield. n and m may be the same (n = m) or different. n + m is 0-30, for example, Preferably it is 0-20, More preferably, it is 0-15.

R ^a , R ^b , R ^c and R ^d are, for example, each independently a substituent or a protecting group, and may be the same or different. Examples of the substituent include hydroxy, carboxy, sulfo, halogen, alkyl halide (haloalkyl, eg, CF ₃ , CH ₂ CF ₃ , CH ₂ CCl ₃ ), nitro, nitroso, cyano, alkyl (eg, methyl, ethyl). , Isopropyl, tert-butyl), alkenyl (eg, vinyl), alkynyl (eg, ethynyl), cycloalkyl (eg, cyclopropyl, adamantyl), cycloalkylalkyl (eg, cyclohexylmethyl, adamantylmethyl), cycloalkenyl (eg, : Cyclopropenyl), cyclylalkyl, hydroxyalkyl (eg, hydroxymethyl, hydroxyethyl), alkoxyalkyl (eg, methoxymethyl, ethoxymethyl, ethoxyethyl), aryl (eg, phenyl, naphthyl), arylalkyl ( Examples: benzyl, phenethyl), alkylaryl (eg, p-methylphenyl), heteroaryl (eg, pyridyl, furyl), heteroarylalkyl (eg, pyridylmethyl), heterocyclyl (eg, piperidyl), heterocyclylalkenyl, heterocyclylalkyl (Example: morpholylmethyl), alkoxy (example: methoxy, ethoxy, propoxy, butoxy), halogenated alkoxy (example: OCF ₃ ), alkenyloxy (example: vinyloxy, allyloxy), aryloxy (example: phenyloxy), alkyloxy Carbonyl (eg, methoxycarbonyl, ethoxycarbonyl, tert-butoxycarbonyl), arylalkyloxy (eg, benzyloxy), amino [alkylamino (eg, methylamino, ethylamino, dimethyl) Amino), acylamino (eg acetylamino, benzoylamino), arylalkylamino (eg benzylamino, tritylamino), hydroxyamino], aminoalkyl (eg aminomethyl), alkylaminoalkyl (eg diethylaminomethyl), And carbamoyl, sulfamoyl, oxo, silyl, silyloxyalkyl and the like. These substituents may be substituted with one or more further substituents or further protecting groups. The further substituent is not particularly limited, and may be a substituent according to the above example, for example. The further protecting group is not particularly limited, and may be, for example, a protecting group according to the following examples. The same applies to the following.

The protecting group (or the further protecting group) is, for example, a functional group that converts a highly reactive functional group into an inert state, and includes known protecting groups. For example, the description of the literature (JFW McOmie, “Protecting Groups in Organic Chemistry”, Prenum Press, London and New York, 1973) can be used for the protecting group. The protective group is not particularly limited, and examples thereof include tert-butyldimethylsilyl group (TBDMS), bis (2-acetoxyethyloxy) methyl group (ACE), triisopropylsilyloxymethyl group (TOM), 1- (2 -Cyanoethoxy) ethyl group (CEE), 2-cyanoethoxymethyl group (CEM), tolylsulfonylethoxymethyl group (TEM), dimethoxytrityl group (DMTr) and the like. When R ³ is OR ⁴ , the protecting group is not particularly limited, and examples thereof include a TBDMS group, an ACE group, a TOM group, a CEE group, a CEM group, and a TEM group. In addition, silyl-containing groups represented by chemical formulas (P1) and (P2) described later are also included. The same applies to the following.

  In the formula (I), hydrogen atoms may be independently substituted with halogens such as Cl, Br, F and I, for example.

The region (Xc) and the region (X) are bonded to the linker region (Lx) via, for example, —OR ¹ — or —OR ² —, respectively. Here, R ¹ and R ² may or may not exist. When R ¹ and R ² are present, R ¹ and R ² are each independently a nucleotide residue or the structure of formula (I) above. When R ¹ and / or R ² is the nucleotide residue, the linker region (Lx) is, for example, the non-nucleotide residue having the structure of the formula (I) excluding the nucleotide residue R ¹ and / or R ^2. And a nucleotide residue. When R ¹ and / or R ² has the structure of the formula (I), the linker region (Xc) has, for example, two or more non-nucleotide residues having the structure of the formula (I) linked to each other. It becomes a structure. The structure of the formula (I) may include 1, 2, 3, or 4, for example. As described above, when a plurality of the structures are included, the structure of (I) may be directly linked or may be bonded via the nucleotide residue, for example. On the other hand, when R ¹ and R ² are not present, the linker region (Lx) is formed only from the non-nucleotide residue having the structure of the formula (I), for example.

The combination of the region (Xc) and the region (X), and —OR ¹ — and —OR ² — is not particularly limited, and examples thereof include any of the following conditions.
Condition (1)
The region (Xc) is bonded to the structure of the formula (I) through —OR ² —, and the region (X) is bonded through —OR ¹ —.
Condition (2)
The region (Xc) is bonded to the structure of the formula (I) through —OR ¹ —, and the region (X) is bonded through —OR ² —.

In the ssPN molecule of the present invention, the atomic group Pe in the formula (I) is not particularly limited except that it contains a peptide bond. However, as described above, the following formula (Ia) is a peptide. .

The atomic group Pe in the formula (I), (IA) or (Ia) is, for example, a chain group, an alicyclic group, an aromatic group, a heteroaromatic group, or a heteroalicyclic group. It may or may not include at least one selected from the group consisting of formula atomic groups. The chain atomic group is not particularly limited, and examples thereof include alkyl, alkenyl, alkynyl, haloalkyl, hydroxyalkyl, alkoxyalkyl, aminoalkyl, silyl, silyloxyalkyl and the like. The alicyclic atomic group is not particularly limited, and examples thereof include cycloalkyl, cycloalkenyl, cycloalkylalkyl, cyclylalkyl, and the like. The aromatic atomic group is not particularly limited, and examples thereof include aryl, arylalkyl, alkylaryl, condensed ring aryl, condensed ring arylalkyl, and condensed ring alkylaryl. The heteroaromatic atomic group is not particularly limited, and examples thereof include heteroaryl, heteroarylalkyl, alkylheteroaryl, condensed ring heteroaryl, condensed ring heteroarylalkyl, condensed ring alkylheteroaryl, and the like. It is done. In the atomic group Pe in the formula (I), (IA), or (Ia), each atomic group may or may not further have a substituent or a protecting group. In the case of plural substituents or protecting groups, they may be the same or different. The substituent is not particularly limited, and examples thereof include the substituents exemplified for R ^a , R ^b , R ^c and R ^d , and more specifically, for example, halogen, hydroxy, alkoxy, amino, carboxy , Sulfo, nitro, carbamoyl, sulfamoyl, alkyl, alkenyl, alkynyl, haloalkyl, aryl, arylalkyl, alkylaryl, cycloalkyl, cycloalkenyl, cycloalkylalkyl, cyclylalkyl, hydroxyalkyl, alkoxyalkyl, aminoalkyl, silyl, And silyloxyalkyl, pyrrolyl, imidazolyl and the like. The protecting group is, for example, the same as the protecting group exemplified for R ^a , R ^b , R ^c and R ^d .

  In the present invention, “amino acid” refers to any organic compound containing one or more amino groups and carboxy groups in the molecule. However, compounds having an imino group instead of an amino group (proline, hydroxyproline, etc.) are also included in amino acids. “Peptide” refers to an organic compound having a structure in which two or more amino acids are bound by peptide bonds. The peptide bond may be an acid amide bond or an acid imide bond. When a plurality of amino groups are present in the peptide molecule represented by the formula (Ia), the amino group explicitly shown in the formula (Ia) may be any amino group. Further, when a plurality of carboxy groups are present in the peptide molecule represented by the formula (Ia), the carboxy group clearly shown in the formula (Ia) may be any carboxy group. .

In the linker region of the single-stranded nucleic acid molecule of the present invention, the number of amino acids constituting the peptide is not particularly limited, but is, for example, 2 to 20, preferably 2 to 10, more preferably 2 to 5. . Moreover, the amino acid which comprises the said peptide may be one type or multiple types. The amino acid constituting the peptide may be, for example, a natural amino acid or an artificial amino acid. In the present invention, “natural amino acid” refers to an amino acid having a naturally occurring structure or an optical isomer thereof. The method for producing the natural amino acid is not particularly limited, and for example, it may be extracted from nature or synthesized. In the present invention, “artificial amino acid” refers to an amino acid having a structure that does not exist in nature. That is, the artificial amino acid refers to a carboxylic acid derivative containing an amino acid, that is, an amino group (an organic compound containing one or more amino groups and carboxy groups in the molecule) and having a structure that does not exist in nature. The amino acid constituting the peptide may be, for example, at least one kind selected from all kinds of amino acids constituting a protein (protein constituting amino acids) and other amino acids (carboxylic acid derivatives containing an amino group). Examples of the protein-constituting amino acids include glycine, α-alanine, arginine, asparagine, aspartic acid, cysteine, cystine, glutamine, glutamic acid, histidine, isoleucine, leucine, lysine, hydroxylysine, methionine, phenylalanine, serine, threonine, tyrosine. , Valine, proline, 4-hydroxyproline, and tryptophan, and other amino acids include, for example, β-alanine, 1-amino-2-carboxycyclopentane, aminobenzoic acid, and aminopyridinecarboxylic acid. These protein-constituting amino acids and other amino acids may or may not have further substituents or protecting groups. The substituent is not particularly limited, and examples thereof include the substituents exemplified for R ^a , R ^b , R ^c and R ^d , and more specifically, for example, halogen, hydroxy, alkoxy, amino, carboxy , Sulfo, nitro, carbamoyl, sulfamoyl, alkyl, alkenyl, alkynyl, haloalkyl, aryl, arylalkyl, alkylaryl, cycloalkyl, cycloalkenyl, cycloalkylalkyl, cyclylalkyl, hydroxyalkyl, alkoxyalkyl, aminoalkyl, silyl, And silyloxyalkyl, pyrrolyl, imidazolyl and the like. The protecting group is the same as, for example, R ^a , R ^b , R ^c and R ^d . In addition, when the amino acids constituting the peptide include isomers such as optical isomers, geometric isomers, and stereoisomers, any isomers may be used.

Examples of the structure of the formula (I) include the following formulas (I-1) and (I-2). In the following formula, n and m are the same as the formula (I).

In the formulas (I-1) and (I-2), n and m are not particularly limited and are as described above. Specific examples include n = 5 and m = 4 in the formula (I-1). The structure is shown in the following formula (I-1a).

  In the ssPN molecule of the present invention, the region (Xc) is complementary to the region (X). Therefore, in the ssPN molecule of the present invention, the region (Xc) can be folded back toward the region (X), and the region (Xc) and the region (X) can form a double chain by self-annealing. It is. As described above, the ssPN molecule of the present invention can form a double strand within the molecule. For example, as in the case of siRNA used in conventional RNA interference, two separated single-stranded RNAs are doubled by annealing. The structure that forms a single-stranded RNA is clearly different.

  In the ssPN molecule of the present invention, for example, only the region (Xc) may be folded to form a duplex with the region (X), and further, a new duplex may be formed in another region. Also good. Hereinafter, the former ssPN molecule, that is, a molecule having one double-stranded formation is referred to as “first ssPN molecule”, and the latter ssPN molecule, that is, a molecule having two double-stranded formation is designated “first ssPN molecule”. 2 ssPN molecules ". Hereinafter, the first ssPN molecule and the second ssPN molecule will be exemplified, but the present invention is not limited thereto.

(1) First ssPN molecule The first ssPN molecule is, for example, a molecule composed of the region (X), the region (Xc), and the linker region (Lx).

  The first ssPN molecule may have, for example, the region (Xc), the linker region (Lx), and the region (X) in the order from 5 ′ side to 3 ′ side. From the 'side to the 5' side, the region (Xc), the linker region (Lx), and the region (X) may be included in the order.

  In the first ssPN molecule, the region (Xc) is complementary to the region (X). Here, the region (Xc) may have a sequence complementary to the entire region of the region (X) or a partial region thereof, and preferably, the entire region of the region (X) or the region thereof The partial region contains a complementary sequence or consists of the complementary sequence. The region (Xc) may be, for example, completely complementary to the entire region complementary to the region (X) or the complementary partial region, and one or several bases may be non-complementary. However, it is preferably completely complementary. The one base or several bases is, for example, 1 to 3 bases, preferably 1 base or 2 bases.

  In the first ssPN molecule, the expression suppression sequence is contained in at least one of the region (Xc) and the region (X) as described above. The first ssPN molecule may have, for example, one or two or more of the expression suppression sequences.

  In the latter case, the one ssPN molecule may have, for example, two or more of the same expression suppression sequences for the same target gene, or may have two or more different expression suppression sequences for the same target, You may have two or more different expression suppression sequences with respect to a different target gene. When the first ssPN molecule has two or more expression suppression sequences, the arrangement location of each expression suppression sequence is not particularly limited, and any one of the region (X) and the region (Xc) However, it may be a different area. When the first ssPN molecule has two or more expression suppression sequences for different target genes, for example, the first ssPN molecule can suppress the expression of two or more different target genes.

  An example of the first ssPN molecule is shown in the schematic diagram of FIG. FIG. 1 (A) is a schematic diagram showing an outline of the order of each region for the ssPN molecule as an example, and FIG. 1 (B) shows that the ssPN molecule forms a double chain in the molecule. FIG. As shown in FIG. 1 (B), the ssPN molecule forms a double chain between the region (Xc) and the region (X), and the Lx region loops according to its length. Take the structure. FIG. 1 merely shows the linking order of the regions and the positional relationship of each region forming a duplex. For example, the length of each region, the shape of the linker region (Lx), etc. Not limited.

  In the first ssPN molecule, the number of bases in the region (Xc) and the region (X) is not particularly limited. Although the length of each area | region is illustrated below, this invention is not restrict | limited to this. In the present invention, “the number of bases” means, for example, “length” and can also be referred to as “base length”. In the present invention, the numerical range of the number of bases discloses, for example, all positive integers belonging to the range. As a specific example, the description of “1 to 4 bases” includes “1, 2, 3, It means all disclosures of “4 bases” (hereinafter the same).

  The region (Xc) may be completely complementary to the entire region of the region (X), for example. In this case, the region (Xc) means, for example, that it consists of a base sequence complementary to the entire region from the 5 ′ end to the 3 ′ end of the region (X), that is, the region (Xc) and the region (Xc) This means that the region (X) has the same base length, and all the bases in the region (Xc) are complementary to all the bases in the region (X).

  The region (Xc) may be completely complementary to a partial region of the region (X), for example. In this case, the region (Xc) means, for example, a base sequence complementary to a partial region of the region (X), that is, the region (Xc) is more than the region (X). It consists of a base sequence having a base length of one base or more, and means that all bases in the region (Xc) are complementary to all bases in the partial region of the region (X). The partial region of the region (X) is preferably, for example, a region having a base sequence continuous from the terminal base (first base) on the region (Xc) side in the region (X).

In the first ssPN molecule, the relationship between the number of bases (X) in the region (X) and the number of bases (Xc) in the region (Xc) satisfies, for example, the following condition (3) or (5) In the former case, specifically, for example, the following condition (11) is satisfied.
X> Xc (3)
X-Xc = 1 to 10, preferably 1, 2 or 3,
More preferably 1 or 2 (11)
X = Xc (5)

  When the region (X) and / or the region (Xc) includes the expression suppression sequence, the region may be, for example, a region composed of only the expression suppression sequence or a region including the expression suppression sequence. Good. The number of bases of the expression suppression sequence is, for example, 19 to 30 bases, and preferably 19, 20 or 21 bases. The region containing the expression suppression sequence may further have an additional sequence on the 5 'side and / or 3' side of the expression suppression sequence, for example. The number of bases of the additional sequence is, for example, 1 to 31 bases, preferably 1 to 21 bases, and more preferably 1 to 11 bases.

  The number of bases in the region (X) is not particularly limited. When the region (X) includes the expression suppression sequence, the lower limit is, for example, 19 bases. The upper limit is, for example, 50 bases, preferably 30 bases, and more preferably 25 bases. Specific examples of the number of bases in the region (X) are, for example, 19 bases to 50 bases, preferably 19 bases to 30 bases, more preferably 19 bases to 25 bases.

  The number of bases in the region (Xc) is not particularly limited. The lower limit is, for example, 19 bases, preferably 20 bases, and more preferably 21 bases. The upper limit is 50 bases, for example, More preferably, it is 40 bases, More preferably, it is 30 bases.

  In the ssPN molecule, the length of the linker region (Lx) is not particularly limited. For example, the linker region (Lx) preferably has a length that allows the region (X) and the region (Xc) to form a double chain. When the linker region (Lx) includes the nucleotide residue in addition to the non-nucleotide residue, the lower limit of the base number of the linker region (Lx) is, for example, 1 base, preferably 2 The base is more preferably 3 bases, and the upper limit thereof is, for example, 100 bases, preferably 80 bases, more preferably 50 bases.

  The total length of the first ssPN molecule is not particularly limited. In the first ssPN molecule, the lower limit of the total number of bases (total number of bases) is, for example, 38 bases, preferably 42 bases, more preferably 50 bases, and even more preferably 51 The base is particularly preferably 52 bases, and the upper limit thereof is, for example, 300 bases, preferably 200 bases, more preferably 150 bases, still more preferably 100 bases, and particularly preferably 80 bases. It is a base. In the first ssPN molecule, the lower limit of the total number of bases excluding the linker region (Lx) is, for example, 38 bases, preferably 42 bases, more preferably 50 bases, still more preferably 51 bases, particularly preferably 52 bases, and the upper limit is, for example, 300 bases, preferably 200 bases, more preferably 150 bases, still more preferably 100 bases, and particularly preferably 80 bases. It is a base.

(2) Second ssPN molecule In addition to the region (X), the linker region (Lx), and the region (Xc), for example, the second ssPN molecule further includes a region (Y) and the region ( It is a molecule having a region (Yc) complementary to Y). In the second ssPN molecule, the region (X) and the region (Y) are connected to form an internal region (Z). Unless otherwise indicated, the description of the first ssPN molecule can be used for the second ssPN molecule.

  For example, the second ssPN molecule includes the region (Xc), the linker region (Lx), the region (X), the region (Y), and the region (Yc) from the 5 ′ side to the 3 ′ side. , In the above order. In this case, the region (Xc) is the 5 ′ side region (Xc), the region (X) in the inner region (Z) is the inner 5 ′ side region (X), and the inner region (Z) is The region (Y) is also referred to as an internal 3 ′ region (Y), and the region (Yc) is also referred to as a 3 ′ side region (Yc). In addition, the second ssPN molecule is, for example, from the 3 ′ side to the 5 ′ side, the region (Xc), the linker region (Lx), the region (X), the region (Y), and the region (Yc). ) In the above order. In this case, the region (Xc) is the 3 ′ side region (Xc), the region (X) in the inner region (Z) is the inner 3 ′ side region (X), and the inner region (Z) is The region (Y) is also referred to as an internal 5 ′ region (Y), and the region (Yc) is also referred to as a 5 ′ side region (Yc).

  As described above, for example, the region (X) and the region (Y) are connected to the internal region (Z). The region (X) and the region (Y) are directly connected, for example, and do not have an intervening sequence therebetween. The internal region (Z) is defined as “the region (X) and the region (Y) are connected to each other” in order to indicate an arrangement relationship between the region (Xc) and the region (Yc). In the internal region (Z), the region (X) and the region (Y) are not limited to separate independent regions in the use of the ssPN molecule. That is, for example, when the internal region (Z) has the expression suppression sequence, the expression suppression sequence is arranged across the region (X) and the region (Y) in the internal region (Z). Also good.

  In the second ssPN molecule, the region (Xc) is complementary to the region (X). Here, the region (Xc) may have a sequence complementary to the entire region of the region (X) or a partial region thereof, and preferably, the entire region of the region (X) or the region thereof The partial region contains a complementary sequence or consists of the complementary sequence. The region (Xc) may be, for example, completely complementary to the entire region complementary to the region (X) or the complementary partial region, and one or several bases may be non-complementary. However, it is preferably completely complementary. The one base or several bases is, for example, 1 to 3 bases, preferably 1 base or 2 bases.

  In the second ssPN molecule, the region (Yc) is complementary to the region (Y). Here, the region (Yc) may have a sequence complementary to the entire region of the region (Y) or a partial region thereof, and preferably the entire region of the region (Y) or a partial region thereof. Comprising a complementary sequence or consisting of the complementary sequence. The region (Yc) may be, for example, completely complementary to the entire region complementary to the region (Y) or the complementary partial region, and one or several bases may be non-complementary. However, it is preferably completely complementary. The one base or several bases is, for example, 1 to 3 bases, preferably 1 base or 2 bases.

  In the second ssPN molecule, the expression suppression sequence is included in at least one of the internal region (Z) and the region (Xc) formed from, for example, the region (X) and the region (Y). Further, it may be included in the region (Yc). When the internal region (Z) has the expression suppression sequence, for example, the region (X) and the region (Y) may have the expression suppression sequence, and the region (X) and You may have the said expression suppression sequence over the said area | region (Y). The second ssPN molecule may have, for example, one or two or more expression suppression sequences.

  When the second ssPN molecule has two or more expression suppressing sequences, the arrangement position of each expression suppressing sequence is not particularly limited, and one of the internal region (Z) and the region (Xc) Alternatively, any one of the inner region (Z) and the region (Xc) and another different region may be used.

  In the second ssPN molecule, the region (Yc) and the region (Y) may be directly connected or indirectly connected, for example. In the former case, direct linkage includes, for example, linkage by a phosphodiester bond. In the latter case, for example, a linker region (Ly) is provided between the region (Yc) and the region (Y), and the region (Yc) and the region ( Y) and the like are connected.

  When the second ssPN molecule has the linker region (Ly), the linker region (Ly) may be, for example, a linker composed of the nucleotide residue, or at least one of the pyrrolidine skeleton and the piperidine skeleton described above. It may be a linker having a non-nucleotide structure. In the latter case, the linker region (Ly) can be represented, for example, by the formula (I), and all the explanations of the formula (I) in the linker region (Lx) can be incorporated.

The region (Yc) and the region (Y) are bonded to the linker region (Ly) through, for example, —OR ¹ — or —OR ² —. Here, R ¹ and R ² may or may not be present in the same manner as the linker region (Lx) described above.

The combination of the region (Xc) and the region (X), the region (Yc) and the (Y), and the —OR ¹ — and —OR ² — is not particularly limited. One of the following conditions can be given.
Condition (1)
The region (Xc) is bonded to the structure of the formula (I) through —OR ² —, the region (X) is bonded through —OR ¹ —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ¹ —, and the region (Y) is bonded through —OR ² —.
Condition (2)
The region (Xc) is bonded to the structure of the formula (I) through —OR ² —, the region (X) is bonded through —OR ¹ —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ² —, and the region (Y) is bonded through —OR ¹ —.
Condition (3)
The region (Xc) is bonded to the structure of the formula (I) through —OR ¹ —, the region (X) is bonded through —OR ² —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ¹ —, and the region (Y) is bonded through —OR ² —.
Condition (4)
The region (Xc) is bonded to the structure of the formula (I) through —OR ¹ —, the region (X) is bonded through —OR ² —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ² —, and the region (Y) is bonded through —OR ¹ —.

  An example of the ssPN molecule having the linker region (Ly) for the second ssPN molecule is shown in the schematic diagram of FIG. As an example, FIG. 2A is a schematic diagram showing an outline of the order of each region from the 5 ′ side to the 3 ′ side of the ssPN molecule, and FIG. FIG. 2 is a schematic diagram showing a state in which a double chain is formed in the molecule. As shown in FIG. 2B, the ssPN molecule has a double chain between the region (Xc) and the region (X) and between the region (Y) and the region (Yc). The Lx region and the Ly region are formed in a loop structure according to their lengths. FIG. 2 merely shows the order of connection of the regions and the positional relationship of the regions forming the duplex. For example, the length of each region, the shape of the linker region, and the like are not limited thereto. FIG. 2 shows the region (Xc) on the 5 ′ side, but the present invention is not limited to this, and the region (Xc) may be located on the 3 ′ side.

  In the second ssPN molecule, the number of bases in the region (Xc), the region (X), the region (Y), and the region (Yc) is not particularly limited. Although the length of each area | region is illustrated below, this invention is not restrict | limited to this.

  As described above, the region (Xc) may be complementary to the entire region (X), for example. In this case, the region (Xc) preferably has the same base length as the region (X), for example, and is composed of a base sequence complementary to the entire region (X). More preferably, the region (Xc) has the same base length as the region (X), and all bases in the region (Xc) are complementary to all bases in the region (X). That is, for example, it is completely complementary. However, the present invention is not limited to this, and for example, as described above, one or several bases may be non-complementary.

  Further, as described above, the region (Xc) may be complementary to a partial region of the region (X), for example. In this case, the region (Xc) has, for example, the same base length as the partial region of the region (X), that is, consists of a base sequence having a base length shorter by one base or more than the region (X). preferable. More preferably, the region (Xc) has the same base length as the partial region of the region (X), and all the bases of the region (Xc) are included in the partial region of the region (X). It is complementary to all bases, i.e., for example, completely complementary. The partial region of the region (X) is preferably, for example, a region having a base sequence continuous from the terminal base (first base) on the region (Xc) side in the region (X).

  As described above, the region (Yc) may be complementary to the entire region (Y), for example. In this case, for example, the region (Yc) preferably has the same base length as the region (Y) and is composed of a base sequence complementary to the entire region (Y). More preferably, the region (Yc) has the same base length as the region (Y), and all bases in the region (Yc) are complementary to all bases in the region (Y). That is, for example, it is completely complementary. However, the present invention is not limited to this, and for example, as described above, one or several bases may be non-complementary.

  Further, as described above, the region (Yc) may be complementary to a partial region of the region (Y), for example. In this case, the region (Yc) has, for example, the same base length as the partial region of the region (Y), that is, consists of a base sequence having a base length shorter by one base or more than the region (Y). preferable. More preferably, the region (Yc) has the same base length as the partial region of the region (Y), and all the bases of the region (Yc) are included in the partial region of the region (Y). It is complementary to all bases, that is, for example, completely complementary. The partial region of the region (Y) is preferably, for example, a region having a base sequence continuous from the terminal base (first base) on the region (Yc) side in the region (Y).

In the second ssPN molecule, the relationship between the number of bases (Z) in the internal region (Z), the number of bases (X) in the region (X) and the number of bases (Y) in the region (Y), The relationship between the number of bases (Z) in the internal region (Z), the number of bases (X) in the region (X) and the number of bases (Xc) in the region (Xc) is, for example, the following formulas (1) and ( Satisfy the condition of 2).
Z = X + Y (1)
Z ≧ Xc + Yc (2)

In the second ssPN molecule, the relationship between the number of bases (X) in the region (X) and the number of bases (Y) in the region (Y) is not particularly limited. .
X = Y (19)
X <Y (20)
X> Y (21)

In the second ssPN molecule, the number of bases (X) in the region (X), the number of bases (Xc) in the region (Xc), the number of bases (Y) in the region (Y), and the bases in the region (Yc) The relationship of the number (Yc) satisfies the following conditions (a) to (d), for example.
(A) Satisfy the conditions of the following formulas (3) and (4).
X> Xc (3)
Y = Yc (4)
(B) The conditions of the following formulas (5) and (6) are satisfied.
X = Xc (5)
Y> Yc (6)
(C) The conditions of the following formulas (7) and (8) are satisfied.
X> Xc (7)
Y> Yc (8)
(D) The conditions of the following formulas (9) and (10) are satisfied.
X = Xc (9)
Y = Yc (10)

In (a) to (d), the difference between the number of bases (X) in the region (X) and the number of bases (Xc) in the region (Xc), the number of bases (Y) in the region (Y) and the region The difference in the number of bases (Yc) of (Yc) preferably satisfies the following condition, for example.
(A) The conditions of the following formulas (11) and (12) are satisfied.
X-Xc = 1-10, preferably 1, 2, 3 or 4,
More preferably 1, 2 or 3 (11)
Y−Yc = 0 (12)
(B) The conditions of the following formulas (13) and (14) are satisfied.
X−Xc = 0 (13)
Y-Yc = 1-10, preferably 1, 2, 3 or 4,
More preferably 1, 2 or 3 (14)
(C) The conditions of the following formulas (15) and (16) are satisfied.
X-Xc = 1 to 10, preferably 1, 2 or 3,
More preferably 1 or 2 (15)
Y-Yc = 1 to 10, preferably 1, 2 or 3,
More preferably 1 or 2 (16)
(D) The conditions of the following formulas (17) and (18) are satisfied.
X−Xc = 0 (17)
Y−Yc = 0 (18)

  An example of the structure of each of the second ssPN molecules (a) to (d) is shown in the schematic diagram of FIG. FIG. 3 shows ssPN including the linker region (Lx) and the linker region (Ly), (A) is the ssPN molecule of (a), (B) is the ssPN molecule of (b), ( C) is an example of the ssPN molecule of (c), and (D) is an example of the ssPN molecule of (d). In FIG. 3, a dotted line shows the state which has formed the double chain | strand by self-annealing. In the ssPN molecule of FIG. 3, the number of bases (X) in the region (X) and the number of bases (Y) in the region (Y) are expressed as “X <Y” in the formula (20). As described above, “X = Y” in the formula (19) or “X> Y” in the formula (21) may be used. FIG. 3 is a schematic diagram showing the relationship between the region (X) and the region (Xc) and the relationship between the region (Y) and the region (Yc). For example, the length of each region is shown in FIG. The shape, the presence or absence of a linker region (Ly), and the like are not limited thereto.

  In the ssPN molecules (a) to (c), for example, the region (Xc) and the region (X), and the region (Yc) and the region (Y) each form a double chain. Thus, the internal region (Z) has a structure having a base that is not aligned with either the region (Xc) or the region (Yc), and can also be said to have a structure having a base that does not form a double chain. In the internal region (Z), the non-aligned base (also referred to as a base that does not form a double chain) is hereinafter referred to as “free base”. In FIG. 3, the free base region is indicated by “F”. The number of bases in the region (F) is not particularly limited. The number of bases (F) in the region (F) is, for example, the number of bases “X-Xc” in the case of the ssPN molecule of (a), and “Y-Yc” in the case of the ssPN molecule of (b). In the case of the ssPN molecule of (c), it is the total number of the base number of “X-Xc” and the base number of “Y-Yc”.

  On the other hand, the ssPN molecule of (d) has a structure in which, for example, the entire region of the internal region (Z) is aligned with the region (Xc) and the region (Yc), and the entire region of the internal region (Z) It can be said that the region forms a double chain. In the ssPN molecule of (d), the 5 'end of the region (Xc) and the 3' end of the region (Yc) are unlinked.

  The total number of bases of the free base (F) in the region (Xc), the region (Yc), and the internal region (Z) is the number of bases in the internal region (Z). For this reason, the lengths of the region (Xc) and the region (Yc) can be appropriately determined according to, for example, the length of the internal region (Z), the number of free bases, and the position thereof.

  The number of bases in the internal region (Z) is, for example, 19 bases or more. The lower limit of the number of bases is, for example, 19 bases, preferably 20 bases, and more preferably 21 bases. The upper limit of the number of bases is, for example, 50 bases, preferably 40 bases, and more preferably 30 bases. Specific examples of the number of bases in the internal region (Z) include, for example, 19 bases, 20 bases, 21 bases, 22 bases, 23 bases, 24 bases, 25 bases, 26 bases, 27 bases, 28 bases, 29 bases, or , 30 bases. In the case where the internal region (Z) has the expression suppression sequence, for example, this condition is preferable.

  When the internal region (Z) includes the expression suppression sequence, the internal region (Z) may be a region composed of only the expression suppression sequence or a region including the expression suppression sequence, for example. The number of bases of the expression suppression sequence is, for example, 19 to 30 bases, and preferably 19, 20 or 21 bases. When the internal region (Z) contains the expression suppression sequence, it may further have an additional sequence on the 5 'side and / or 3' side of the expression suppression sequence. The number of bases of the additional sequence is, for example, 1 to 31 bases, preferably 1 to 21 bases, more preferably 1 to 11 bases, and further preferably 1 to 7 bases.

  The number of bases in the region (Xc) is, for example, 1 to 29 bases, preferably 1 to 11 bases, preferably 1 to 7 bases, more preferably 1 to 4 bases, still more preferably. 1 base, 2 bases, 3 bases. When the internal region (Z) or the region (Yc) includes the expression suppression sequence, for example, such a base number is preferable. As a specific example, when the number of bases in the internal region (Z) is 19 to 30 bases (for example, 19 bases), the number of bases in the region (Xc) is, for example, 1 to 11 bases, preferably 1 -7 bases, more preferably 1-4 bases, still more preferably 1 base, 2 bases, 3 bases.

  When the region (Xc) includes the expression suppression sequence, the region (Xc) may be a region composed of only the expression suppression sequence or a region including the expression suppression sequence, for example. The length of the expression suppression sequence is, for example, as described above. When the region (Xc) includes the expression suppressing sequence, an additional sequence may be further provided on the 5 'side and / or 3' side of the expression suppressing sequence. The number of bases of the additional sequence is, for example, 1 to 11 bases, and preferably 1 to 7 bases.

  The number of bases in the region (Yc) is, for example, 1 to 29 bases, preferably 1 to 11 bases, preferably 1 to 7 bases, more preferably 1 to 4 bases, still more preferably. 1 base, 2 bases, 3 bases. When the internal region (Z) or the region (Xc) includes the expression suppression sequence, for example, such a base number is preferable. As a specific example, when the number of bases in the internal region (Z) is 19 to 30 bases (for example, 19 bases), the number of bases in the region (Yc) is, for example, 1 to 11 bases, preferably 1 -7 bases, more preferably 1 base, 2 bases, 3 bases or 4 bases, and still more preferably 1 base, 2 bases, 3 bases.

  When the region (Yc) includes the expression suppression sequence, the region (Yc) may be, for example, a region composed only of the expression suppression sequence or a region including the expression suppression sequence. The length of the expression suppression sequence is, for example, as described above. When the region (Yc) includes the expression suppression sequence, it may further have an additional sequence on the 5 'side and / or 3' side of the expression suppression sequence. The number of bases of the additional sequence is, for example, 1 to 11 bases, and preferably 1 to 7 bases.

  As described above, the number of bases in the internal region (Z), the region (Xc), and the region (Yc) can be represented by, for example, “Z ≧ Xc + Yc” in the formula (2). As a specific example, the number of bases “Xc + Yc” is, for example, the same as or smaller than the inner region (Z). In the latter case, “Z− (Xc + Yc)” is, for example, 1 to 10, preferably 1 to 4, more preferably 1, 2 or 3. The “Z− (Xc + Yc)” corresponds to, for example, the number of bases (F) in the free region (F) in the internal region (Z).

  In the second ssPN molecule, the lengths of the linker region (Lx) and the linker region (Ly) are not particularly limited. The linker region (Lx) is as described above. When the structural unit of the linker region (Ly) contains a base, the lower limit of the number of bases of the linker region (Ly) is, for example, 1 base, preferably 2 bases, more preferably 3 bases. The upper limit is, for example, 100 bases, preferably 80 bases, and more preferably 50 bases. Specific examples of the number of bases in each linker region include 1 to 50 bases, 1 to 30 bases, 1 to 20 bases, 1 to 10 bases, 1 to 7 bases, and 1 to 4 bases. This is not a limitation.

  The linker region (Ly) may be the same as or different from the linker region (Lx), for example.

  The total length of the second ssPN molecule is not particularly limited. In the second ssPN molecule, the lower limit of the total number of bases (the total number of bases) is, for example, 38 bases, preferably 42 bases, more preferably 50 bases, and even more preferably 51 The base is particularly preferably 52 bases, and the upper limit thereof is, for example, 300 bases, preferably 200 bases, more preferably 150 bases, still more preferably 100 bases, and particularly preferably 80 bases. It is a base. In the second ssPN molecule, the lower limit of the total number of bases excluding the linker region (Lx) and the linker region (Ly) is, for example, 38 bases, preferably 42 bases, more preferably 50 bases More preferably 51 bases, particularly preferably 52 bases, and the upper limit is, for example, 300 bases, preferably 200 bases, more preferably 150 bases, still more preferably 100 bases. Yes, particularly preferably 80 bases.

  In the ssPN molecule of the present invention, as described above, the linker region (Lx) only needs to have the non-nucleotide structure, and other structural units are not particularly limited. Examples of the structural unit include nucleotide residues. Examples of the nucleotide residues include ribonucleotide residues and deoxyribonucleotide residues. Examples of the nucleotide residue include an unmodified unmodified nucleotide residue and a modified modified nucleotide residue. For example, the ssPN molecule of the present invention can improve nuclease resistance and stability by including the modified nucleotide residue. The ssPN molecule of the present invention may further contain a non-nucleotide residue in addition to the nucleotide residue, for example.

The structural unit of the region (Xc), the region (X), the region (Y) and the region (Yc) is preferably the nucleotide residue. Each region is composed of, for example, the following residues (1) to (3).
(1) Unmodified nucleotide residue (2) Modified nucleotide residue (3) Unmodified nucleotide residue and modified nucleotide residue

The linker region (Lx) may be composed of only the non-nucleotide residue, or may be composed of the non-nucleotide and the nucleotide residue, for example. The linker region (Lx) is composed of, for example, the following residues (4) to (7).
(4) non-nucleotide residues (5) non-nucleotide residues and unmodified nucleotide residues (6) non-nucleotide residues and modified nucleotide residues (7) non-nucleotide residues, unmodified nucleotide residues and modified nucleotide residues

The structural unit of the linker region (Ly) is not particularly limited, and examples thereof include the nucleotide residue and the non-nucleotide residue as described above. The linker region may be composed of, for example, only the nucleotide residue, may be composed of only the non-nucleotide residue, or may be composed of the nucleotide residue and the non-nucleotide residue. . The linker region is composed of, for example, the following residues (1) to (7).
(1) Unmodified nucleotide residues (2) Modified nucleotide residues (3) Unmodified nucleotide residues and modified nucleotide residues (4) Nonnucleotide residues (5) Nonnucleotide residues and unmodified nucleotide residues (6 ) Non-nucleotide residues and modified nucleotide residues (7) non-nucleotide residues, unmodified nucleotide residues and modified nucleotide residues

  Examples of the ssPN molecule of the present invention include a molecule composed only of the nucleotide residue except the linker region (Lx), a molecule containing the non-nucleotide residue in addition to the nucleotide residue, and the like. In the ssPN molecule of the present invention, as described above, the nucleotide residue may be, for example, only the unmodified nucleotide residue, only the modified nucleotide residue, or the unmodified nucleotide residue and the modification. Both nucleotide residues may be present. When the ssPN molecule includes the unmodified nucleotide residue and the modified nucleotide residue, the number of the modified nucleotide residue is not particularly limited, and is, for example, “one or several”, specifically , For example, 1 to 5, preferably 1 to 4, more preferably 1 to 3, and most preferably 1 or 2. When the ssPN molecule of the present invention includes the non-nucleotide residue, the number of the non-nucleotide residue is not particularly limited, and is, for example, “1 or several”, specifically, for example, 1 or Two.

  In the ssPN molecule of the present invention, the nucleotide residue is preferably, for example, a ribonucleotide residue. In this case, the ssPN molecule of the present invention is also referred to as “ssRNA molecule” or “P-ssRNA molecule”, for example. Examples of the ssRNA molecule include a molecule composed only of the ribonucleotide residue except the linker region (Lx), a molecule containing the non-nucleotide residue in addition to the ribonucleotide residue, and the like. In the ssRNA molecule, as described above, the ribonucleotide residue may be, for example, only the unmodified ribonucleotide residue, only the modified ribonucleotide residue, or the unmodified ribonucleotide residue and Both of the modified ribonucleotide residues may be included.

  When the ssRNA molecule includes, for example, the modified ribonucleotide residue in addition to the unmodified ribonucleotide residue, the number of the modified ribonucleotide residue is not particularly limited. For example, “1 or several” Specifically, for example, 1 to 5, preferably 1 to 4, more preferably 1 to 3, and most preferably 1 or 2. Examples of the modified ribonucleotide residue with respect to the unmodified ribonucleotide residue include the deoxyribonucleotide residue in which a ribose residue is substituted with a deoxyribose residue. For example, when the ssRNA molecule includes the deoxyribonucleotide residue in addition to the unmodified ribonucleotide residue, the number of the deoxyribonucleotide residue is not particularly limited, and is, for example, “one or several”. Specifically, for example, 1 to 5, preferably 1 to 4, more preferably 1 to 3, and most preferably 1 or 2.

The ssPN molecule of the present invention may contain, for example, a labeling substance and may be labeled with the labeling substance. The labeling substance is not particularly limited, and examples thereof include fluorescent substances, dyes, isotopes and the like. Examples of the labeling substance include fluorophores such as pyrene, TAMRA, fluorescein, Cy3 dye, and Cy5 dye, and examples of the dye include Alexa dye such as Alexa488. Examples of the isotope include a stable isotope and a radioactive isotope, and preferably a stable isotope. For example, the stable isotope has a low risk of exposure and does not require a dedicated facility, so that it is easy to handle and the cost can be reduced. In addition, the stable isotope does not change the physical properties of the labeled compound, for example, and is excellent in properties as a tracer. The stable isotope is not particularly limited, and examples thereof include ² H, ¹³ C, ¹⁵ N, ¹⁷ O, ¹⁸ O, ³³ S, ³⁴ S, and ³⁶ S.

  As described above, for example, the ssPN molecule of the present invention preferably introduces the labeling substance into the non-nucleotide structure, and introduces the labeling substance into the non-nucleotide residue of the linker region (Lx). preferable. Introduction of the labeling substance to the non-nucleotide residue can be performed easily and inexpensively, for example.

  As described above, the ssPN molecule of the present invention can suppress the expression of the target gene. Therefore, the ssPN molecule of the present invention can be used as a therapeutic agent for diseases caused by genes, for example. If the ssPN molecule contains a sequence that suppresses the expression of the gene causing the disease as the expression suppressing sequence, the disease can be treated by suppressing the expression of the target gene, for example. In the present invention, “treatment” includes, for example, the meanings of preventing the disease, improving the disease, and improving the prognosis.

  The method of using the ssPN molecule of the present invention is not particularly limited, and for example, the ssPN molecule may be administered to an administration subject having the target gene.

  Examples of the administration subject include cells, tissues or organs. Examples of the administration subject include non-human animals such as non-human mammals other than humans and humans. The administration can be, for example, in vivo or in vitro. The cells are not particularly limited, and examples thereof include various cultured cells such as HeLa cells, 293 cells, NIH3T3 cells, and COS cells, stem cells such as ES cells and hematopoietic stem cells, and cells isolated from living bodies such as primary cultured cells. can give.

  In the present invention, the target gene that is subject to expression suppression is not particularly limited, and a desired gene can be set, and the expression suppression sequence may be appropriately designed according to the gene.

（配列番号２０）
5’-CCAUGAGAAGUAUGACAACAGCC-Lx-GGCUGUUGUCAUACUUCUCAUGGUU-3’

Specific examples of the ssPN molecule of the present invention are shown below, but the present invention is not limited thereto. Examples of the base sequence of the ssPN molecule include the base sequences of SEQ ID NOs: 4 and 20 when the target gene is a GAPDH gene. In the base sequence, for example, one or several deletions, substitutions and / or When the target gene is TGF-β1, for example, the base sequences of SEQ ID NOs: 21 to 25 can be exemplified. In the base sequence, for example, one or several deletions or substitutions are possible. And / or an added base sequence. In the sequences of SEQ ID NOs: 4 and 20, the underlined part GUUGUCAUACUUCUCAUGG (SEQ ID NO: 5) is a region related to suppression of GAPDH gene expression. In the following SEQ ID NOs: 21 to 25, “*” represents a free base. Further, in the following SEQ ID NOs: 4 and 20 to 25, the structures of Lx and Ly are not particularly limited, but may be, for example, the structures (Lgg) shown in Examples described later.

(SEQ ID NO: 20)
5'-CCAUGAGAAGUAUGACAACAGCC-Lx-GGCU GUUGUCAUACUUCUCAUGG UU-3 '

  Regarding the use of the ssPN molecule of the present invention, the description of the composition of the present invention, expression suppression method, treatment method and the like described later can be incorporated.

  Since the ssPN molecule of the present invention can suppress the expression of the target gene as described above, it is useful as, for example, pharmaceuticals, diagnostic agents and agricultural chemicals, and research tools for agricultural chemicals, medicine, life sciences and the like.

  In the present invention, “alkyl” includes, for example, a linear or branched alkyl group. The number of carbon atoms of the alkyl is not particularly limited, and is, for example, 1-30, preferably 1-6 or 1-4. Examples of the alkyl group include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, n-pentyl, isopentyl, neopentyl, n-hexyl, isohexyl, n-heptyl, Examples include n-octyl, n-nonyl, n-decyl and the like. Preferable examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, n-pentyl, isopentyl, neopentyl, n-hexyl, isohexyl and the like.

  In the present invention, “alkenyl” includes, for example, linear or branched alkenyl. Examples of the alkenyl include those having one or more double bonds in the alkyl. The number of carbon atoms of the alkenyl is not particularly limited, and is the same as that of the alkyl, for example, preferably 2 to 8. Examples of the alkenyl include vinyl, 1-propenyl, 2-propenyl, 1-butenyl, 2-butenyl, 3-butenyl, 1,3-butadienyl, 3-methyl-2-butenyl and the like.

  In the present invention, “alkynyl” includes, for example, linear or branched alkynyl. Examples of the alkynyl include those having one or more triple bonds in the alkyl. The number of carbon atoms of the alkynyl is not particularly limited, and is the same as, for example, the alkyl, preferably 2-8. Examples of the alkynyl include ethynyl, propynyl, butynyl and the like. The alkynyl may further have one or more double bonds, for example.

  In the present invention, “aryl” includes, for example, a monocyclic aromatic hydrocarbon group and a polycyclic aromatic hydrocarbon group. Examples of the monocyclic aromatic hydrocarbon group include phenyl and the like. Examples of the polycyclic aromatic hydrocarbon group include 1-naphthyl, 2-naphthyl, 1-anthryl, 2-anthryl, 9-anthryl, 1-phenanthryl, 2-phenanthryl, 3-phenanthryl, 4-phenanthryl, 9- And phenanthryl. Preferable examples include naphthyl such as phenyl, 1-naphthyl and 2-naphthyl.

  In the present invention, “heteroaryl” includes, for example, a monocyclic aromatic heterocyclic group and a condensed aromatic heterocyclic group. Examples of the heteroaryl include furyl (eg, 2-furyl, 3-furyl), thienyl (eg, 2-thienyl, 3-thienyl), pyrrolyl (eg, 1-pyrrolyl, 2-pyrrolyl, 3-pyrrolyl), Imidazolyl (eg: 1-imidazolyl, 2-imidazolyl, 4-imidazolyl), pyrazolyl (eg: 1-pyrazolyl, 3-pyrazolyl, 4-pyrazolyl), triazolyl (eg: 1,2,4-triazol-1-yl, 1,2,4-triazol-3-yl, 1,2,4-triazol-4-yl), tetrazolyl (eg 1-tetrazolyl, 2-tetrazolyl, 5-tetrazolyl), oxazolyl (eg 2-oxazolyl, 4-oxazolyl, 5-oxazolyl), isoxazolyl (eg, 3-isoxazolyl, 4-isoxazolyl, 5-isoxazolyl) Thiazolyl (eg: 2-thiazolyl, 4-thiazolyl, 5-thiazolyl), thiadiazolyl, isothiazolyl (eg: 3-isothiazolyl, 4-isothiazolyl, 5-isothiazolyl), pyridyl (eg: 2-pyridyl, 3-pyridyl, 4- Pyridyl), pyridazinyl (eg: 3-pyridazinyl, 4-pyridazinyl), pyrimidinyl (eg: 2-pyrimidinyl, 4-pyrimidinyl, 5-pyrimidinyl), furazanyl (eg: 3-furazinyl), pyrazinyl (eg: 2-pyrazinyl) Oxadiazolyl (eg 1,3,4-oxadiazol-2-yl), benzofuryl (eg 2-benzo [b] furyl, -benzo [b] furyl, 4-benzo [b] furyl, 5-benzo [B] furyl, 6-benzo [b] furyl, 7-benzo [b] furyl), benzothienyl (example 2-benzo [b] thienyl, 3-benzo [b] thienyl, 4-benzo [b] thienyl, 5-benzo [b] thienyl, 6-benzo [b] thienyl, 7-benzo [b] thienyl), benz Imidazolyl (eg 1-benzimidazolyl, 2-benzimidazolyl, 4-benzoimidazolyl, 5-benzoimidazolyl), dibenzofuryl, benzoxazolyl, benzothiazolyl, quinoxalyl (eg 2-quinoxalinyl, 5-quinoxalinyl, 6-quinoxalinyl), cinnolinyl ( Examples: 3-cinnolinyl, 4-cinnolinyl, 5-cinnolinyl, 6-cinnolinyl, 7-cinnolinyl, 8-cinnolinyl), quinazolyl (example: 2-quinazolinyl, 4-quinazolinyl, 5-quinazolinyl, 6-quinazolinyl, 7-quinazolinyl) , 8-quinazolinyl) Quinolyl (eg, 2-quinolyl, 3-quinolyl, 4-quinolyl, 5-quinolyl, 6-quinolyl, 7-quinolyl, 8-quinolyl), phthalazinyl (eg, 1-phthalazinyl, 5-phthalazinyl, 6-phthalazinyl) , Isoquinolyl (eg, 1-isoquinolyl, 3-isoquinolyl, 4-isoquinolyl, 5-isoquinolyl, 6-isoquinolyl, 7-isoquinolyl, 8-isoquinolyl), prill, pteridinyl (eg, 2-pteridinyl, 4-pteridinyl, 6- Pteridinyl, 7-pteridinyl), carbazolyl, phenanthridinyl, acridinyl (eg 1-acridinyl, 2-acridinyl, 3-acridinyl, 4-acridinyl, 9-acridinyl), indolyl (eg 1-indolyl, 2-indolyl) , 3-indolyl, 4-indolyl, 5-i Drill, 6-indolyl, 7-indolyl), isoindolyl, phenazinyl (eg 1-phenazinyl, 2-phenazinyl) or phenothiazinyl (eg 1-phenothiazinyl, 2-phenothiazinyl, 3-phenothiazinyl, 4-phenothiazinyl) ) Etc.

  In the present invention, “cycloalkyl” is, for example, a cyclic saturated hydrocarbon group, and the carbon number is, for example, 3-15. Examples of the cycloalkyl include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, a bridged cyclic hydrocarbon group, a spiro hydrocarbon group, and the like, preferably cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl. And a bridged cyclic hydrocarbon group.

  In the present invention, the “bridged cyclic hydrocarbon group” includes, for example, bicyclo [2.1.0] pentyl, bicyclo [2.2.1] heptyl, bicyclo [2.2.2] octyl and bicyclo [3. 2.1] octyl, tricyclo [2.2.1.0] heptyl, bicyclo [3.3.1] nonane, 1-adamantyl, 2-adamantyl and the like.

  In the present invention, examples of the “spiro hydrocarbon group” include spiro [3.4] octyl and the like.

  In the present invention, “cycloalkenyl” includes, for example, a cyclic unsaturated aliphatic hydrocarbon group, and has 3 to 7 carbon atoms, for example. Examples of the group include cyclopropenyl, cyclobutenyl, cyclopentenyl, cyclohexenyl, cycloheptenyl, and the like, preferably cyclopropenyl, cyclobutenyl, cyclopentenyl, cyclohexenyl, and the like. The cycloalkenyl includes, for example, a bridged cyclic hydrocarbon group and a spiro hydrocarbon group having an unsaturated bond in the ring.

  In the present invention, “arylalkyl” includes, for example, benzyl, 2-phenethyl, naphthalenylmethyl and the like, and “cycloalkylalkyl” or “cyclylalkyl” includes, for example, cyclohexylmethyl, adamantylmethyl and the like. Examples of the “hydroxyalkyl” include, for example, hydroxymethyl and 2-hydroxyethyl.

  In the present invention, “alkoxy” includes, for example, the alkyl-O— group, and examples thereof include methoxy, ethoxy, n-propoxy, isopropoxy, and n-butoxy, and “alkoxyalkyl” includes, for example, Examples thereof include methoxymethyl and the like, and “aminoalkyl” includes, for example, 2-aminoethyl and the like.

  In the present invention, “heterocyclyl” is, for example, 1-pyrrolinyl, 2-pyrrolinyl, 3-pyrrolinyl, 1-pyrrolidinyl, 2-pyrrolidinyl, 3-pyrrolidinyl, pyrrolidinone, 1-imidazolinyl, 2-imidazolinyl, 4-imidazolinyl, 1 -Imidazolidinyl, 2-imidazolidinyl, 4-imidazolidinyl, imidazolidinone, 1-pyrazolinyl, 3-pyrazolinyl, 4-pyrazolinyl, 1-pyrazolidinyl, 3-pyrazolidinyl, 4-pyrazolidinyl, piperidinone, piperidino, 2-piperidinyl 4-piperidinyl, 1-piperazinyl, 2-piperazinyl, piperazinone, 2-morpholinyl, 3-morpholinyl, morpholino, tetrahydropyranyl, tetrahydrofuranyl and the like.

  In the present invention, “heterocyclylalkyl” includes, for example, piperidinylmethyl, piperazinylmethyl and the like, and “heterocyclylalkenyl” includes, for example, 2-piperidinylethenyl and the like, and “heteroarylalkyl” Examples thereof include pyridylmethyl and quinolin-3-ylmethyl.

In the present invention, “silyl” includes a group represented by the formula R ₃ Si—, wherein R can be independently selected from the above alkyl, aryl and cycloalkyl, such as trimethylsilyl group, tert-butyldimethylsilyl The “silyloxy” includes, for example, a trimethylsilyloxy group, and the “silyloxyalkyl” includes, for example, trimethylsilyloxymethyl.

  In the present invention, “alkylene” includes, for example, methylene, ethylene, propylene and the like.

In the present invention, the various groups described above may be substituted. Examples of the substituent include hydroxy, carboxy, sulfo, halogen, alkyl halide (haloalkyl, eg, CF ₃ , CH ₂ CF ₃ , CH ₂ CCl ₃ ), nitro, nitroso, cyano, alkyl (eg, methyl, ethyl). , Isopropyl, tert-butyl), alkenyl (eg, vinyl), alkynyl (eg, ethynyl), cycloalkyl (eg, cyclopropyl, adamantyl), cycloalkylalkyl (eg, cyclohexylmethyl, adamantylmethyl), cycloalkenyl (eg, : Cyclopropenyl), cyclylalkyl, hydroxyalkyl (eg, hydroxymethyl, hydroxyethyl), alkoxyalkyl (eg, methoxymethyl, ethoxymethyl, ethoxyethyl), aryl (eg, phenyl, naphthyl), arylalkyl ( Examples: benzyl, phenethyl), alkylaryl (eg, p-methylphenyl), heteroaryl (eg, pyridyl, furyl), heteroarylalkyl (eg, pyridylmethyl), heterocyclyl (eg, piperidyl), heterocyclylalkenyl, heterocyclylalkyl (Example: morpholylmethyl), alkoxy (example: methoxy, ethoxy, propoxy, butoxy), halogenated alkoxy (example: OCF ₃ ), alkenyloxy (example: vinyloxy, allyloxy), aryloxy (example: phenyloxy), alkyloxy Carbonyl (eg, methoxycarbonyl, ethoxycarbonyl, tert-butoxycarbonyl), arylalkyloxy (eg, benzyloxy), amino [alkylamino (eg, methylamino, ethylamino, dimethyl) Amino), acylamino (eg acetylamino, benzoylamino), arylalkylamino (eg benzylamino, tritylamino), hydroxyamino], aminoalkyl (eg aminomethyl), alkylaminoalkyl (eg diethylaminomethyl), And carbamoyl, sulfamoyl, oxo, silyl, silyloxyalkyl and the like.

2. Nucleotide residues The nucleotide residues include, for example, sugars, bases and phosphates as constituent elements. Examples of the nucleotide residues include ribonucleotide residues and deoxyribonucleotide residues as described above. The ribonucleotide residue has, for example, a ribose residue as a sugar, and has adenine (A), guanine (G), cytosine (C) and U (uracil) as bases, and the deoxyribose residue is For example, it has a deoxyribose residue as a sugar and has adenine (A), guanine (G), cytosine (C) and thymine (T) as bases.

  Examples of the nucleotide residue include an unmodified nucleotide residue and a modified nucleotide residue. In the unmodified nucleotide residue, each of the constituent elements is, for example, the same or substantially the same as that existing in nature, and preferably the same or substantially the same as that naturally occurring in the human body. .

  The modified nucleotide residue is, for example, a nucleotide residue obtained by modifying the unmodified nucleotide residue. In the modified nucleotide, for example, any component of the unmodified nucleotide residue may be modified. In the present invention, “modification” refers to, for example, substitution, addition and / or deletion of the component, substitution, addition and / or deletion of atoms and / or functional groups in the component, and is referred to as “modification”. be able to. Examples of the modified nucleotide residue include naturally occurring nucleotide residues, artificially modified nucleotide residues, and the like. For example, Limbac et al. (Lumbach et al., 1994, Summary: the modified nucleosides of RNA, Nucleic Acids Res. 22: 2183-2196) can be referred to as the naturally-occurring modified nucleotide residues. The modified nucleotide residue may be, for example, a residue of the nucleotide substitute.

  Examples of the modification of the nucleotide residue include modification of a ribose-phosphate skeleton (hereinafter referred to as ribophosphate skeleton).

  In the ribophosphate skeleton, for example, a ribose residue can be modified. The ribose residue can be modified, for example, at the 2′-position carbon. Specifically, for example, a hydroxyl group bonded to the 2′-position carbon can be replaced with hydrogen, fluoro, or the like. By substituting the hydroxyl group at the 2'-position with hydrogen, the ribose residue can be replaced with deoxyribose. The ribose residue can be substituted with, for example, a stereoisomer, and can be substituted with, for example, an arabinose residue.

  The ribophosphate skeleton may be substituted with a non-ribophosphate skeleton having a non-ribose residue and / or non-phosphate, for example. Examples of the non-ribophosphate skeleton include an uncharged body of the ribophosphate skeleton. Examples of the substitute for the nucleotide substituted with the non-ribophosphate skeleton include morpholino, cyclobutyl, pyrrolidine and the like. Other examples of the substitute include artificial nucleic acid monomer residues. Specific examples include PNA (peptide nucleic acid), LNA (Locked Nucleic Acid), ENA (2'-O, 4'-C-Ethylenebridged Nucleic Acids), and PNA is preferable.

  In the ribophosphate skeleton, for example, a phosphate group can be modified. In the ribophosphate skeleton, the phosphate group closest to the sugar residue is called an α-phosphate group. The α-phosphate group is negatively charged, and the charge is evenly distributed over two oxygen atoms that are not bound to a sugar residue. Of the four oxygen atoms in the α-phosphate group, in the phosphodiester bond between nucleotide residues, two oxygen atoms that are not bonded to a sugar residue are hereinafter referred to as “non-linking oxygen”. Say. On the other hand, in the phosphodiester bond between the nucleotide residues, the two oxygen atoms bonded to the sugar residue are hereinafter referred to as “linking oxygen”. The α-phosphate group is preferably modified, for example, to be uncharged or to be asymmetric in the charge distribution in the non-bonded atoms.

  The phosphate group may replace the non-bonded oxygen, for example. The oxygen is, for example, S (sulfur), Se (selenium), B (boron), C (carbon), H (hydrogen), N (nitrogen), and OR (R is, for example, an alkyl group or an aryl group) It can be substituted with any atom, and is preferably substituted with S. In the non-bonded oxygen, for example, both are preferably substituted, and more preferably, both are substituted with S. Examples of the modified phosphate group include phosphorothioate, phosphorodithioate, phosphoroselenate, boranophosphate, boranophosphate ester, phosphonate hydrogen, phosphoramidate, alkyl or arylphosphonate, and phosphotriester. Among them, phosphorodithioate in which the two non-bonded oxygens are both substituted with S is preferable.

  The phosphate group may substitute, for example, the bound oxygen. The oxygen may be substituted with any atom of S (sulfur), C (carbon) and N (nitrogen), for example. Examples of the modified phosphate group include a bridged phosphoramidate substituted with N, a bridged phosphorothioate substituted with S, and a bridged methylenephosphonate substituted with C. The binding oxygen substitution is preferably performed, for example, on at least one of the 5 ′ terminal nucleotide residue and the 3 ′ terminal nucleotide residue of the ssPN molecule of the present invention, and in the case of the 5 ′ side, substitution with C is preferable. For the 'side, substitution with N is preferred.

  The phosphate group may be substituted with, for example, the phosphorus-free linker. Examples of the linker include siloxane, carbonate, carboxymethyl, carbamate, amide, thioether, ethylene oxide linker, sulfonate, sulfonamide, thioform acetal, form acetal, oxime, methyleneimino, methylenemethylimino, methylenehydrazo, methylenedimethyl. Hydrazo, methyleneoxymethylimino and the like, preferably methylenecarbonylamino group and methylenemethylimino group.

  In the ssPN molecule of the present invention, for example, at least one nucleotide residue at the 3 'end and the 5' end may be modified. The modification may be, for example, either the 3 'end or the 5' end, or both. The modification is, for example, as described above, and is preferably performed on the terminal phosphate group. For example, the phosphate group may be modified entirely, or one or more atoms in the phosphate group may be modified. In the former case, for example, the entire phosphate group may be substituted or deleted.

  Examples of the modification of the terminal nucleotide residue include addition of other molecules. Examples of the other molecules include functional molecules such as a labeling substance and a protecting group as described above. Examples of the protecting group include S (sulfur), Si (silicon), B (boron), ester-containing groups, and the like. The functional molecule such as the labeling substance can be used for, for example, detection of the ssPN molecule of the present invention.

  For example, the other molecule may be added to the phosphate group of the nucleotide residue, or may be added to the phosphate group or the sugar residue via a spacer. The terminal atom of the spacer can be added or substituted, for example, to the binding oxygen of the phosphate group or O, N, S or C of the sugar residue. The binding site of the sugar residue is preferably, for example, C at the 3 'position or C at the 5' position, or an atom bonded thereto. The spacer can be added or substituted at a terminal atom of a nucleotide substitute such as PNA.

The spacer is not particularly limited, and for example, — (CH ₂ ) _n —, — (CH ₂ ) _n N—, — (CH ₂ ) _n O—, — (CH ₂ ) _n S—, O (CH ₂ CH ₂ O) _n CH ₂ CH ₂ OH, abasic sugar, amide, carboxy, amine, oxyamine, oxyimine, thioether, disulfide, thiourea, sulfonamide, morpholino and the like, and biotin reagent and fluorescein reagent Good. In the above formula, n is a positive integer, and n = 3 or 6 is preferable.

In addition to these, the molecule to be added to the terminal includes, for example, a dye, an intercalating agent (for example, acridine), a crosslinking agent (for example, psoralen, mitomycin C), a porphyrin (TPPC4, texaphyrin, suffirin), a polycyclic Aromatic hydrocarbons (eg phenazine, dihydrophenazine), artificial endonucleases (eg EDTA), lipophilic carriers (eg cholesterol, cholic acid, adamantaneacetic acid, 1-pyrenebutyric acid, dihydrotestosterone, 1,3-bis- O (hexadecyl) glycerol, geranyloxyhexyl group, hexadecylglycerol, borneol, menthol, 1,3-propanediol, heptadecyl group, palmitic acid, myristic acid, O3- (oleoyl) lithocholic acid, O3- (oleoyl) call , Dimethoxytrityl, or phenoxazine) and peptide conjugates (e.g., antennapedia peptide, Tat peptide), alkylating agents, phosphate, amino, mercapto, PEG (e.g., PEG-40K), MPEG, [MPEG] 2, Polyamino, alkyl, substituted alkyl, radiolabeled marker, enzyme, hapten (eg, biotin), transport / absorption enhancer (eg, aspirin, vitamin E, folic acid), synthetic ribonuclease (eg, imidazole, bisimidazole, histamine, imidazole cluster) , Acridine-imidazole complex, tetraaza macrocycle Eu ³⁺ complex) and the like.

In the ssPN molecule of the present invention, the 5 ′ end may be modified with, for example, a phosphate group or a phosphate group analog. The phosphorylation may be, for example, 5 ′ monophosphate ((HO) ₂ (O) PO-5 ′), 5 ′ diphosphate ((HO) ₂ (O) POP (HO) (O) —O-5) '), 5' triphosphate ((HO) ₂ (O) PO- (HO) (O) POP (HO) (O) -O-5 '), 5'-guanosine cap (7-methylated or non- Methylation, 7m-GO-5 '-(HO) (O) PO- (HO) (O) POP (HO) (O) -O-5'), 5'-adenosine cap (Appp), any modification Or an unmodified nucleotide cap structure (NO-5 '-(HO) (O) PO- (HO) (O) POP (HO) (O) -O-5'), 5 'monothiophosphate (phosphorothioate: (HO ) ₂ (S) PO-5 ′), 5 ′ monodithiophosphoric acid (phosphorodithioate: (HO) (HS) (S) PO-5 ′), 5′-phosphorothiolic acid ((HO) ₂ ( O) PS-5 ′), sulfur-substituted monophosphates, diphosphates and triphosphates (eg 5′-α-thiotriphosphate, 5′-γ-thiotriphosphate, etc.), 5′- Phosphoramidates ((HO) ₂ (O) P—NH-5 ′, (HO) (NH ₂ ) (O) PO-5 ′), 5′-alkylphosphonic acids (eg RP (OH) (O ) -O-5 ' _{(OH) 2 (O) P} -5'-CH 2, R is alkyl (e.g., methyl, ethyl, isopropyl, propyl, etc.)), 5'-alkyl ether phosphonic acid (e.g., RP (OH) (O) - O-5 ′ and R include alkyl ethers (for example, methoxymethyl, ethoxymethyl, etc.).

  In the nucleotide residue, the base is not particularly limited. The base may be, for example, a natural base or a non-natural base. The base may be, for example, naturally derived or a synthetic product. As the base, for example, a general base or a modified analog thereof can be used.

Examples of the base include purine bases such as adenine and guanine, pyrimidine bases such as cytosine, uracil and thymine. Other examples of the base include inosine, thymine, xanthine, hypoxanthine, nubalarine, isoguanisine, and tubercidine. Examples of the base include alkyl derivatives such as 2-aminoadenine and 6-methylated purine; alkyl derivatives such as 2-propylated purine; 5-halouracil and 5-halocytosine; 5-propynyluracil and 5-propynylcytosine; -Azouracil, 6-azocytosine and 6-azothymine; 5-uracil (pseudouracil), 4-thiouracil, 5-halouracil, 5- (2-aminopropyl) uracil, 5-aminoallyluracil; 8-halogenated, aminated, Thiolated, thioalkylated, hydroxylated and other 8-substituted purines; 5-trifluoromethylated and other 5-substituted pyrimidines; 7-methylguanine; 5-substituted pyrimidines; 6-azapyrimidines; -6, and O-6 substituted purines (2-aminopropyladenyl 5-propynyluracil and 5-propynylcytosine; dihydrouracil; 3-deaza-5-azacytosine; 2-aminopurine; 5-alkyluracil; 7-alkylguanine; 5-alkylcytosine; 7-deazaadenine; N6 2,6-diaminopurine; 5-amino-allyl-uracil; N3-methyluracil; substituted 1,2,4-triazole; 2-pyridinone; 5-nitroindole; 3-nitropyrrole; -Methoxyuracil; uracil-5-oxyacetic acid; 5-methoxycarbonylmethyluracil; 5-methyl-2-thiouracil; 5-methoxycarbonylmethyl-2-thiouracil; 5-methylaminomethyl-2-thiouracil; 3- (3 -Amino-3-carboxypropyl) uracil 3-methylcytosine; 5-methylcytosine; ^{N 4} - acetyl cytosine; 2-thiouracil; N6-methyl adenine; N6-isopentyl adenine; 2-methylthio -N6--isopentenyladenine; N- methylguanine; O-alkylated Bases and the like. Purines and pyrimidines are described in, for example, US Pat. No. 3,687,808, “Concise Encyclopedia of Polymer And Engineering”, pages 858-859, edited by Kroschwitz J. i. Sons, 1990, and English et al. (English et al.), Angelwandte Chemie, International Edition, 1991, 30, p. 613 is included.

  In addition to these, the modified nucleotide residue may include, for example, a residue lacking a base, that is, an abasic ribophosphate skeleton. The modified nucleotide residues are, for example, US Provisional Application No. 60 / 465,665 (filing date: April 25, 2003) and International Application No. PCT / US04 / 07070 (filing date: 2004/3). The residues described on the 8th of May) can be used, and the present invention can incorporate these documents.

3. Method for synthesizing ssPN molecule of the present invention The method for synthesizing the ssPN molecule of the present invention is not particularly limited, and a conventionally known method can be adopted. Examples of the synthesis method include a synthesis method using a genetic engineering technique, a chemical synthesis method, and the like. Examples of genetic engineering techniques include in vitro transcription synthesis, a method using a vector, a method using a PCR cassette, and the like. The vector is not particularly limited, and examples thereof include non-viral vectors such as plasmids and viral vectors. It is not limited to this. The chemical synthesis method is not particularly limited, and examples thereof include a phosphoramidite method and an H-phosphonate method. In the chemical synthesis method, for example, a commercially available automatic nucleic acid synthesizer can be used. In the chemical synthesis method, amidite is generally used. The amidite is not particularly limited, and commercially available amidites include, for example, RNA Phosphoramidates (2′-O-TBDMSi, trade name, Michisato Pharmaceutical), ACE amidite, TOM amidite, CEE amidite, CEM amidite, TEM amidite, etc. Can be given. For the ssPN molecule of the present invention, for example, the monomer of the present invention described later is preferably used in the synthesis of the linker region represented by the formula (I).

4). Composition As described above, the composition for suppressing expression of the present invention is a composition for suppressing the expression of a target gene, and is characterized by containing the ssPN molecule of the present invention. The composition of the present invention is characterized by containing the ssPN molecule of the present invention, and other configurations are not limited at all. The expression suppressing composition of the present invention can also be referred to as an expression suppressing reagent, for example.

  According to the present invention, for example, expression of the target gene can be suppressed by administration to a subject in which the target gene exists.

  Moreover, the pharmaceutical composition of the present invention is characterized by containing the ssPN molecule of the present invention as described above. The composition of the present invention is characterized by containing the ssPN molecule of the present invention, and other configurations are not limited at all. The pharmaceutical composition of the present invention can also be referred to as a pharmaceutical product, for example. The pharmaceutical composition of the present invention can also be referred to as a pharmaceutical product, for example.

  According to the present invention, for example, administration to a patient with a disease caused by a gene can suppress the expression of the gene and treat the disease. In the present invention, as described above, “treatment” includes, for example, the meanings of prevention of the above-mentioned diseases, improvement of the diseases, and improvement of the prognosis.

  In the present invention, the disease to be treated is not particularly limited, and examples thereof include diseases caused by gene expression. According to the type of the disease, a gene that causes the disease is set as the target gene, and the expression suppression sequence may be set as appropriate according to the target gene.

  As a specific example, if the target gene is set to the TGF-β1 gene and an expression suppression sequence for the gene is arranged in the ssPN molecule, for example, for treatment of inflammatory diseases, specifically acute lung injury, etc. Can be used.

  The usage method of the composition for suppressing expression and the pharmaceutical composition (hereinafter referred to as composition) of the present invention is not particularly limited, and for example, the ssPN molecule may be administered to an administration subject having the target gene.

  Examples of the administration subject include cells, tissues or organs. Examples of the administration subject include non-human animals such as non-human mammals other than humans and humans. The administration can be, for example, in vivo or in vitro. The cells are not particularly limited, and examples thereof include various cultured cells such as HeLa cells, 293 cells, NIH3T3 cells, and COS cells, stem cells such as ES cells and hematopoietic stem cells, and cells isolated from living bodies such as primary cultured cells. can give.

  The administration method is not particularly limited, and can be appropriately determined depending on the administration subject, for example. When the administration subject is a cultured cell, examples thereof include a method using a transfection reagent and an electroporation method. When the administration is in vivo, for example, oral administration or parenteral administration may be used. Examples of the parenteral administration include injection, subcutaneous administration, and local administration.

  The composition of the present invention may contain, for example, only the ssPN molecule of the present invention, or may further contain other additives. The additive is not particularly limited, and for example, a pharmaceutically acceptable additive is preferable. The type of the additive is not particularly limited, and can be appropriately selected depending on, for example, the type of administration target.

  In the composition of the present invention, the ssPN may form a complex with the additive, for example. The additive can also be referred to as a complexing agent, for example. For example, the complex can efficiently deliver the ssPN molecule. The bond between the ssPN molecule and the complexing agent is not particularly limited, and examples thereof include non-covalent bonds. Examples of the complex include an inclusion complex.

  The complexing agent is not particularly limited, and examples thereof include a polymer, cyclodextrin, adamantine and the like. Examples of the cyclodextrin include a linear cyclodextrin copolymer and a linear oxidized cyclodextrin copolymer.

  In addition to this, examples of the additive include a carrier, a binding substance to a target cell, a condensing agent, and a fusing agent.

  For example, the carrier is preferably a polymer, and more preferably a biopolymer. The carrier is preferably biodegradable, for example. Examples of the carrier include proteins such as human serum albumin (HSA), low density lipoprotein (LDL), and globulin; carbohydrates such as dextran, pullulan, chitin, chitosan, inulin, cyclodextrin, and hyaluronic acid; lipids and the like Can be given. As the carrier, for example, a synthetic polymer such as a synthetic polyamino acid can also be used. Examples of the polyamino acid include polylysine (PLL), poly L-aspartic acid, poly L-glutamic acid, styrene-maleic anhydride copolymer, poly (L-lactide-co-glycolide) copolymer, divinyl ether-maleic anhydride. Copolymer, N- (2-hydroxypropyl) methacrylamide copolymer (HMPA), polyethylene glycol (PEG), polyvinyl alcohol (PVA), polyurethane, poly (2-ethylacrylic acid), N-isopropylacrylamide polymer, or polyphosphazine ) Etc.

  Examples of the binding substance include thyroid stimulating hormone, melanocyte stimulating hormone, lectin, glycoprotein, surfactant protein A, mucin carbohydrate, polyvalent lactose, polyvalent galactose, N-acetylgalactosamine, N-acetylglucosamine, polyvalent mannose. Multivalent fucose, glycosylated polyamino acid, polyvalent galactose, transferrin, bisphosphonate, polyglutamic acid, polyaspartic acid, lipid, cholesterol, steroid, bile acid, folate, vitamin B12, biotin, neproxin, RGD peptide, RDG peptide mimetic and the like.

  Examples of the fusing agent and condensing agent include polyamino chains such as polyethyleneimine (PEI). PEI may be, for example, linear or branched, and may be either a synthetic product or a natural product. The PEI may be alkyl-substituted or lipid-substituted, for example. In addition, for example, polyhistidine, polyimidazole, polypyridine, polypropyleneimine, melittin, polyacetal substance (for example, cationic polyacetal) and the like can be used as the fusion agent. The fusion agent may have an α helical structure, for example. The fusion agent may be a membrane disrupting agent such as melittin.

  The composition of the present invention can use, for example, US Pat. No. 6,509,323, US Patent Publication No. 2003/0008818, PCT / US04 / 07070, and the like for the formation of the complex.

  In addition to this, examples of the additive include amphiphilic molecules. The amphiphilic molecule is, for example, a molecule having a hydrophobic region and a hydrophilic region. The molecule is preferably a polymer, for example. The polymer is, for example, a polymer having a secondary structure, and a polymer having a repetitive secondary structure is preferable. As a specific example, for example, a polypeptide is preferable, and an α-helical polypeptide is more preferable.

  The amphiphilic polymer may be, for example, a polymer having two or more amphiphilic subunits. Examples of the subunit include a subunit having a cyclic structure having at least one hydrophilic group and one hydrophobic group. The subunit may have, for example, a steroid such as cholic acid, an aromatic structure, or the like. The polymer may have both a cyclic structure subunit such as an aromatic subunit and an amino acid.

5. Expression suppression method As described above, the expression suppression method of the present invention is a method of suppressing the expression of a target gene, characterized by using the ssPN molecule of the present invention. The expression suppression method of the present invention is characterized by using the ssPN molecule of the present invention, and other processes and conditions are not limited at all.

  In the expression suppression method of the present invention, the gene expression suppression mechanism is not particularly limited, and examples thereof include expression suppression by RNA interference. Here, the expression suppression method of the present invention is, for example, a method of inducing RNA interference that suppresses the expression of the target gene, and can also be said to be an expression induction method characterized by using the ssPN molecule of the present invention.

  The expression suppression method of the present invention includes, for example, a step of administering the ssPN molecule to a subject in which the target gene is present. By the administration step, for example, the ssPN molecule is brought into contact with the administration subject. Examples of the administration subject include cells, tissues or organs. Examples of the administration subject include non-human animals such as non-human mammals other than humans and humans. The administration can be, for example, in vivo or in vitro.

  In the expression suppression method of the present invention, for example, the ssPN molecule may be administered alone, or the composition of the present invention containing the ssPN molecule may be administered. The administration method is not particularly limited, and can be appropriately selected according to, for example, the kind of administration target.

6). Treatment Method The treatment method for a disease of the present invention includes the step of administering the ssPN molecule of the present invention to a patient as described above, and the ssPN molecule serves as the gene that causes the disease as the expression suppression sequence. It has a sequence that suppresses the expression of. The treatment method of the present invention is characterized by using the ssPN molecule of the present invention, and other steps and conditions are not limited at all. For the treatment method of the present invention, for example, the expression suppression method of the present invention can be used.

7). Use of ssPN molecule The use of the present invention is the use of the ssPN molecule of the present invention for suppressing the expression of the target gene. The use of the present invention is also the use of the ssPN molecule of the present invention for the induction of RNA interference.

  The nucleic acid molecule of the present invention is a nucleic acid molecule for use in the treatment of a disease, wherein the nucleic acid molecule is the ssPN molecule of the present invention, and the ssPN molecule serves as the cause of the disease as the expression suppression sequence. It has a sequence that suppresses the expression of the gene to be

8). Monomer The monomer of the present invention is a monomer for nucleic acid synthesis and has a structure represented by the following formula (II). Unless otherwise indicated, the description of the ssPN molecule | numerator of the said this invention can be used for the monomer of this invention.

  When the monomer of the present invention is used, for example, in the synthesis of the ssPN molecule of the present invention, the linker region (Lx) and the linker region (Ly) represented by the formula (I) can be easily synthesized. The monomer of the present invention can be used, for example, as an amidite for automatic nucleic acid synthesis, and can be applied to, for example, a general nucleic acid automatic synthesizer. Examples of the synthesis method include a phosphoramidite method and an H-phosphonate method.

In the above formula,
X ¹ and X ² are each independently H ₂ , O, S or NH;
Y ¹ and Y ² are each independently a single bond, CH ₂ , NH, O or S;
R ¹¹ and R ²¹ are each independently H, a protecting group or a phosphate protecting group;
L ¹ is an alkylene chain having n carbon atoms, and a hydrogen atom on the alkylene carbon atom is substituted with OH, OR ^a , NH ₂ , NHR ^a , NR ^a R ^b , SH, or SR ^a May not be substituted, or
L ¹ is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ¹ is NH, O or S, the atom of L ¹ bonded to Y ¹ is carbon, the atom of L ¹ bonded to OR ¹¹ is carbon, and oxygen atoms are not adjacent to each other;
L ² is an alkylene chain having m carbon atoms, and a hydrogen atom on the alkylene carbon atom may be substituted with OH, OR ^c , NH ₂ , NHR ^c , NR ^c R ^d , SH or SR ^c. May not be substituted, or
L ² is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, ^{Y 2} is, NH, for O or S, atoms of ^{L 2} that bind to ^{Y 2} is carbon, atoms of ^{L 2} that bind to OR ²¹ is carbon, between the oxygen atom is not adjacent;
R ^a , R ^b , R ^c and R ^d are each independently a substituent or a protecting group;
m is an integer in the range of 0-30;
n is an integer in the range of 0-30;
Pe is an arbitrary atomic group including a peptide bond, provided that the following formula (Ia) is a peptide.

In the formula (II), the description of the formula (I) can be used for the same part as the formula (I). Specifically, in the formula (II), for example, X ¹ , X ² , Y ¹ , Y ² , L ¹ , L ² , m, n and ring A can all use the description of the formula (I). .

In the formula (II), R ¹ and R ² are each independently H, a protecting group, or a phosphate protecting group, as described above.

The protecting group is, for example, the same as described in the formula (I), and can be selected from, for example, group I as a specific example. Examples of the group I include a dimethoxytrityl (DMTr) group, a TBDMS group, an ACE group, a TOM group, a CEE group, a CEM group, a TEM group, and a silyl-containing group represented by the following formula (P1) or (P2). Among them, it is preferable that either the DMtr group or the silyl-containing group is used.

The phosphate protecting group can be represented by the following formula, for example.
^{-P (OR 6) (NR 7} R 8)
In the above formula, R ⁶ is a hydrogen atom or an arbitrary substituent. The substituent R ⁶ is preferably, for example, a hydrocarbon group, and the hydrocarbon group may be substituted with an electron withdrawing group or may not be substituted. Substituent R ⁶ is, for example, halogen, haloalkyl, heteroaryl, hydroxyalkyl, alkoxyalkyl, aminoalkyl, silyl, silyloxyalkyl, heterocyclylalkenyl, heterocyclylalkyl, heteroarylalkyl, and alkyl, alkenyl, alkynyl, aryl, Examples thereof include hydrocarbons such as arylalkyl, cycloalkyl, cycloalkenyl, cycloalkylalkyl, cyclylalkyl and the like, and may be substituted with an electron withdrawing group or may not be substituted. Specific examples of the substituent R ⁶ include a β-cyanoethyl group, a nitrophenylethyl group, and a methyl group.

R ⁷ and R ⁸ are each a hydrogen atom or an arbitrary substituent, and may be the same or different. The substituents R ⁷ and R ⁸ are preferably, for example, a hydrocarbon group, and the hydrocarbon group may be further substituted with an arbitrary substituent or may not be substituted. The hydrocarbon group is, for example, the same as the enumeration for R ⁶ described above, and is preferably a methyl group, an ethyl group, or an isopropyl group. In this case, specific examples of —NR ⁷ R ⁸ include a diisopropylamino group, a diethylamino group, and an ethylmethylamino group. Alternatively, the substituents R ⁷ and R ⁸ are combined, and together with the nitrogen atom to which they are bonded (ie, —NR ⁷ R ⁸ is combined), a nitrogen-containing ring (eg, piperidyl group, morpholino group, etc.) May be formed.

Specific examples of the phosphate protecting group can be selected from, for example, the following group II. Group II, for _{example, -P (OCH 2 CH 2 CN} ) (N (i-Pr) 2), - P (OCH 3) (N (i-Pr) 2) , and the like. In the above formula, i-Pr represents isopropyl.

In the formula (II), for example, one of R ¹¹ and R ¹² is H or a protecting group, and the other is H or a phosphate protecting group. Preferably, for example, when R ¹¹ is the protecting group, R ¹² is preferably H or the phosphate protecting group, specifically, when R ¹¹ is selected from the group I, R ¹² is , H or said group II. Also preferably, for example, when R ¹¹ is the phosphate protecting group, R ¹² is preferably H or the protecting group, specifically, when R ¹¹ is selected from the group II, R ¹² is preferably selected from H or Group I.

Examples of the structure of the formula (II) include the following formulas (II-1) and (II-2). In the following formula, n and m are the same as the formula (II).

In the formulas (II-1) and (II-2), n and m are not particularly limited and are as described above. Specific examples include n = 5 and m = 42 in the formula (II-1). The structure is shown in the following formula (II-1a).

The production method of the monomer of the present invention is not particularly limited. For example, as shown in the following scheme 1, from the compound (Ib) in which the amino group of the peptide (Ia) is protected with a protecting group R ³¹ , the following compound is obtained by a condensation reaction. (Ic) may be manufactured, (IIa) may be further manufactured from (Ic), and (IIa) may be converted to (II). However, the following scheme 1 is an exemplification, and the present invention is not limited to this. In the following chemical formulas (Ib) and (Ic), the protecting group R ³¹ is, for example, Fmoc (9-fluorenylmethyloxycarbonyl group), Z (benzyloxycarbonyl), BOC (t-butoxycarbonyl), etc. Is mentioned. In the following chemical formulas (Ib), (Ic) and (IIa), Y ¹ , Y ² , L ¹ , L ² , R ¹¹ and R ²¹ are the same as those in the formula (II). The following compound (IIa) is a compound in which X ¹ is O and X ² is O in the formula (II). The carbonyl oxygen in the following formula (II) may be appropriately converted to X ¹ and X ² in the above formula (II). If it is not necessary to convert, the following compound (IIa) is directly converted into the compound (II). It may be used as

  The monomer of this invention and its manufacturing method are further illustrated in the following scheme 2. However, the following scheme 2 is an exemplification, and the present invention is not limited to this. In the following scheme 2, “Fmoc” represents a 9-fluorenylmethyloxycarbonyl group, “iPr” represents an isopropyl group, “Tr” represents a trityl group, that is, a triphenylmethyl group, “ODMTr” represents a 4,4′-dimethoxytrityloxy group. The same applies to the following.

  The monomer of the present invention preferably contains, for example, the labeling substance, and preferably contains the stable isotope. The labeling substance is as described above.

  When the monomer of the present invention contains an isotope such as the stable isotope, for example, the isotope can be easily introduced into the ssPN molecule of the present invention. The monomer having an isotope can be synthesized, for example, from the raw material of peptide (Ia) into which the isotope is introduced. In the present invention, the method for obtaining the isotope-introduced peptide (Ia) is not particularly limited. For example, it may be produced by an appropriate method, or may be used if a commercially available product is available.

As a peptide into which a stable isotope is introduced, for example, a peptide into which deuterium (D) is introduced can be produced by treating a peptide bond with LiAlD ₄ as shown in the following scheme 3, for example.

As a peptide into which a stable isotope has been introduced, for example, a peptide into which heavy oxygen ( ¹⁸ O) has been introduced, for example, a carboxylic acid methyl ester is converted to H ₂ ¹⁸ O under basic conditions as shown in the following formula. The carboxylic acid in the following formula can be condensed with an amino group or imino group to form a peptide bond.

In addition, a method for producing a peptide into which heavy nitrogen ( ¹⁵ N) or heavy carbon ( ¹³ C) is introduced is not particularly limited, and can be produced by an appropriate method.

  In this way, a monomer into which a stable isotope is introduced can be synthesized, and a nucleic acid molecule into which a stable isotope is introduced into the linker region can be synthesized by using the monomer as a synthesis amidite. is there.

  Hereinafter, the present invention will be described in detail with reference to examples and the like, but the present invention is not limited thereto.

(Example A1)
According to the following scheme 5, hexanoic acid glycylglycine-4,4′-dimethoxytrityloxybutyramide phosphoramidite (6) was synthesized. Compound (6) is an example of the monomer of the present invention. Further, “Gly” in the following scheme 5 represents a structure represented by the following formula, that is, an atomic group having a structure in which one hydrogen atom of an amino group and OH group of a carboxy group are removed from glycine. Hereinafter, “Gly” represents a structure represented by the following formula unless otherwise specified. In Scheme 5 below, the NH side of Gly is bonded to Fmoc or a carbonyl carbon, and the carbonyl carbon (CO) side of Gly is bonded to an OH or N atom. “GlyGly” represents a structure in which two Gly are linked to form a peptide bond (below).

(Gly)
—HN—CH ₂ —CO—

(GlyGly)
—HN—CH ₂ —CO—HN—CH ₂ —CO—

(1) 4-trifluoroacetamidobutanol (Compound 1)
A solution of 4-aminobutanol (2.50 g, 28.05 mmol) and ethyl trifluoroacetate (19.92 g, 140.26 mmol) in ethanol (100 ml) was stirred at room temperature overnight. The reaction mixture was concentrated under reduced pressure to obtain colorless syrup 4-trifluoroacetamidobutanol (1) (5.44 g, q.).

(2) 4- (4,4′-dimethoxytrityloxy) butylamine (Compound 2)
Compound 1 (4.15 g, 22.40 mmol) was azeotropically dried three times using anhydrous pyridine. To the azeotropic residue were added 4,4′-dimethoxytrityl chloride (9.60 g, 28.3 mmol) and anhydrous pyridine (100 ml), and the mixture was stirred overnight at room temperature. Methanol (10 ml) was added to the resulting reaction mixture and stirred at room temperature for 30 minutes, and then the solvent was distilled off at room temperature under reduced pressure to about 20 ml. Thereafter, dichloromethane (200 ml) was added, and the mixture was washed 3 times with saturated aqueous sodium hydrogen carbonate, and further washed with saturated brine. After drying with sodium sulfate, the solvent was distilled off under reduced pressure. An aqueous solution (70 ml) of sodium hydroxide (3.71 g, 92.7 mmol) was added to a tetrahydrofuran solution (50 ml) of the crude residue thus obtained (9.00 g). While the mixture was vigorously stirred at room temperature, tetrabutylammonium fluoride trihydrate (180 mg) was added, and the mixture was further vigorously stirred at room temperature overnight. Ethyl acetate (200 ml) and water (100 ml) were added to the resulting reaction mixture, and the organic layer was separated. The aqueous layer was further extracted with ethyl acetate, and the extract was combined with the previously collected organic layer and dried over sodium sulfate. Thereafter, the desiccant (sodium sulfate) was filtered off and the solvent was distilled off under reduced pressure. The resulting residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (9: 1) + 0.05% pyridine) to give 4- (4,4′-dimethoxytrityloxy) butylamine (2) (6.36 g). 87%). The instrumental analysis value of 4- (4,4′-dimethoxytrityloxy) butylamine (2) is shown below.

4- (4,4′-dimethoxytrityloxy) butylamine (2);
¹ H-NMR (CDCl ₃ ): δ = 7.42-7.45 (m, 2H), 7.26-7.34 (m, 12H), 7.17-7.20 (m, 1H), 6.80-6.84 (m, 4H), 3.79 (s, 6H), 3.48 (s, 2H, NH 2), 3.06 (t, 6.8 Hz, 2H, CH 2) _{, 2.67 (t, 7.4 Hz,} 2H, CH 2), 1.60-1.65 (m, 2H, CH 2), 1.49-1.55 (m, 2H, CH 2)

(3) Fmoc-Glycylglycine-4,4′-dimethoxytrityloxybutyramide (Compound 3)
Fmoc-glycylglycine (Fmoc-GlyGly-OH, purchased from China Langchem) (2.50 g, 7.05 mmol), dicyclohexylcarbodiimide (1.75 g, 8.46 mmol) and 1-hydroxybenzotriazole monohydrate ( 2.59 g (16.92 mmol) in anhydrous N, N-dimethylformamide (70 ml) was added compound 2 (3.31 g, 8.46 mmol) in anhydrous N, N-dimethylformamide (50 ml) with ice in an argon atmosphere. Added under cold. After removing the ice bath, the mixture was stirred at room temperature overnight under an argon atmosphere. The produced precipitate was filtered off, and the filtrate was concentrated at 35 ° C. under reduced pressure. Dichloromethane (200 ml) was added to the resulting residue and washed twice with saturated brine. The organic layer was separated and dried over sodium sulfate, and the solvent was distilled off under reduced pressure. The residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (95: 5) + 0.05% pyridine, then dichloromethane-methanol (9: 1) + 0.05% pyridine), and colorless syrup-like Fmoc- Glycylglycine-4,4′-dimethyoxytrityloxybutyramide (3) (3.49 g, 68%) was obtained.

(4) Glycylglycine-4,4′-dimethoxytrityloxybutyramide (Compound 4)
Acetonitrile (5 ml) and piperidine (2.4 ml) were added to compound 3 (3.00 g, 4.12 mmol) at room temperature, and the mixture was stirred at room temperature overnight. The solvent was distilled off from the reaction mixture under reduced pressure, and the resulting residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (9: 1) + 0.05% pyridine) to give glycylglycine-4,4. '-Dimethoxyxytrityloxybutyramide (4) (1.13 g, 54%) was obtained. Below, the instrumental analysis value of glycylglycine-4,4'-dimethoxy trityloxybutyramide (4) is shown.

Glycylglycine-4,4′-dimethoxytrityloxybutyramide (4);
¹ H-NMR (CDCl ₃ ): δ = 7.40-7.42 (m, 2H), 7.25-7.31 (m, 12H), 7.19-7.21 (m, 1H), 6.80-6.84 (m, 4H), 3.89 (d, J = 5.9 Hz, 2H), 3.79 (s, 6H), 3.37 (s, 2H), 3.25 ( t, J = 5.8 Hz, 2H, CH ₂ ), 2.67 (t, J = 5.8 Hz, 2H, CH ₂ ), 1.57-1.65 (m, 4H, CH ₂ ).

(5) Hydroxyhexanoic acid amide glycylglycine-4,4'-dimethoxytrityloxybutyramide (Compound 5)
Compound 4 (1.07 g, 2.11 mmol) was azeotropically dried three times with anhydrous acetonitrile, then 6-hydroxyhexanoic acid (336 mg, 2.54 mmol), 1-ethyl-3- (3-dimethylamino) under an argon atmosphere. Propyl) carbodiimide hydrochloride (487 mg, 2.54 mmol), 1-hydroxybenzotriazole monohydrate (778 mg, 5.08 mmol), and anhydrous dichloromethane (20 ml) were added at room temperature and stirred for 10 minutes. Triethylamine (778 mg, 5.08 mmol) was added to the mixture thus obtained, and the mixture was stirred overnight at room temperature under an argon atmosphere. Dichloromethane (150 ml) was added to the resulting reaction mixture, and the mixture was washed 3 times with saturated aqueous sodium hydrogen carbonate and once with saturated brine. The organic layer was separated and dried over sodium sulfate, and the solvent was distilled off under reduced pressure. The obtained residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (95: 5) + 0.05% pyridine) to give a colorless syrup-like hydroxyhexanoic acid amide glycylglycine-4,4′-diethyl. Methoxytrityloxybutyramide (5) (890 mg, 68%) was obtained. The instrumental analysis value of hydroxyhexanoic acid amide glycylglycine-4,4′-dimethoxytrityloxybutyramide (5) is shown below.

Hydroxyhexanoic acid amide glycylglycine-4,4'-dimethoxyoxyl trityloxybutyramide (5);
¹ H-NMR (CDCl ₃ ): δ = 7.41-7.42 (m, 2H), 7.27-7.34 (m, 12H), 7.18-7.21 (m, 1H), 6.81-6.83 (m, 4H), 3.92 (d, J = 5.43 Hz, 2H, CH ₂ ), 3.84 (d, J = 5.9 Hz, 2H), 3.79 ( _{s, 6H), 3.60 (m} , 2H, CH 2), 3.23-3.28 (m, 2H, CH 2), 3.05-3.10 (m, 2H, CH 2), 2 _{.56 (t, J = 7.3Hz,} 2H, CH 2), 1.50-1.72 (m, 8H), 1.30-1.45 (m, 2H, CH 2).

(6) Hexanoic acid amidoglycylglycine-4,4′-dimethoxytrityloxybutyramide phosphoramidite (Compound 6)
Compound 5 (824 mg, 1.33 mmol) was azeotropically dried three times with anhydrous pyridine. Next, diisopropylammonium tetrazolide (274 mg, 1.60 mmol) was added, degassed under reduced pressure, filled with argon gas, and anhydrous acetonitrile (1 ml) was added. Further, 2-cyanoethoxy-N, N, N ′, N′-tetraisopropyl phosphorodiamidite (482 mg, 1.60 mmol) in anhydrous acetonitrile (1 ml) was added, and the mixture was stirred at room temperature for 4 hours under an argon atmosphere. did. Dichloromethane (100 ml) was added to the obtained reaction mixture, and the mixture was washed twice with saturated aqueous sodium hydrogen carbonate and once with saturated brine. The organic layer was separated and dried over sodium sulfate, and the solvent was distilled off under reduced pressure. The residue was subjected to column chromatography (developing solvent: dichloromethane-acetone (7: 3) + 0.05% pyridine) using amino silica, and hexanoic acid glycylglycine-4,4′-dimethoxytrityloxybutyramide. The phosphoramidite (6) (938 mg, 86%, HPLC 98.2%) was obtained. The instrumental analysis value of hexanoic acid amide glycylglycine-4,4′-dimethoxytrityloxybutyramide phosphoramidite (6) is shown below.

Hexanoic acid glycylglycine-4,4′-dimethoxytrityloxybutyramide phosphoramidite (6);
¹ H-NMR (CDCl ₃ ): δ = 7.36-7.47 (m, 3H), 7.24-7.30 (m, 5H), 7.18-7.19 (m, 1H), 6.80-6.82 (m, 4H), 3.92 (d, J = 4.9 Hz, 2H, CH 2), 3.84 (d, J = 5.4 Hz, 2H), 3. 76 (s, 6H), 3.73-3.85 (m, 4H), 3.54-3.64 (m, 4H), 3.18-3.25 (m, 2H, CH 2), 3 .05-3.10 (m, 2H, CH ₂ ), 2.60 (t, J = 6.3 Hz, 2H, CH ₂ ), 2.23 (t, 7.4 Hz, 2H, CH ₂ ) , 1.55-1.68 (m, 8H), 1.30-1.45 (m, 2H, CH 2). 1.15-1.18 (m, 12H):
P-NMR (CDCl ₃ ): δ = 146.57.
HPLC: Retention time 6.25 min (Shimadzu SPD-10AV (XBridge OST C18, 4.6 mm × 50 mm))

(Example B1) Solid phase synthesis of RNA RNA having the linker of the present invention (single-stranded nucleic acid molecule of the present invention) was synthesized. RNA was synthesized from the 3 ′ side to the 5 ′ side using a nucleic acid synthesizer (trade name: ABI Expedite (registered trademark) 8909 Nucleic Acid Synthesis System, Applied Biosystems) based on the phosphoramidite method. For the synthesis, RNA Phosphoramidites (2′-O-TBDMSi, trade name, Michisato Pharmaceutical) was used as an RNA amidite (hereinafter the same). The amidite was deprotected according to a conventional method, and the synthesized RNA was purified by HPLC. In the following examples, RNA synthesis was performed in the same manner unless otherwise indicated.

Specifically, the compound (6) of the above-mentioned scheme 5 is used as a monomer of the present invention, and the structures of the linker regions (Lx) and (Ly) are represented by the following chemical formula Lgg as RNA (Ex) of this example. The represented single-stranded RNA (ssRNA) was synthesized.

(Lgg [Lx or Ly structure])
_{-O (CH 2) 5 CO-} GlyGly-NH (CH 2) 4 O-

First, RNA having the sequence shown in SEQ ID NO: 1 was synthesized. Then, the compound 6 was linked to the 5 ′ end of the RNA. Next, RNA having the sequence shown in SEQ ID NO: 2 was ligated to the 5 ′ side of the RNA shown in SEQ ID NO: 1 via the compound 6. Furthermore, the compound 6 was linked to the 5 ′ end of the RNA shown in SEQ ID NO: 2. Furthermore, the RNA of the sequence shown in SEQ ID NO: 3 below was ligated to the 5 ′ side of the RNA shown in SEQ ID NO: 2 via the compound 6 to synthesize the ssRNA of Example.

5'-GAA-3 '(SEQ ID NO: 1)
5'-GGCUGUUGUCAUACUUCUCAUGGUUC-3 '(SEQ ID NO: 2)
5'-CAUGAGAAGUAUGACAACAGCC-3 '(SEQ ID NO: 3)

ＰＫ−００５２の発現抑制領域（配列番号５）
5’-GUUGUCAUACUUCUCAUGG-3’

The ssRNA of Example synthesized as described above is hereinafter referred to as PK-0052. In the PK-0052, as shown in the following SEQ ID NO: 4, from the 5 ′ side, the RNA of SEQ ID NO: 3, the RNA of SEQ ID NO: 2, and the RNA of SEQ ID NO: 1 are arranged in the above order, RNA of No. 3 (corresponding to Xc) and RNA of SEQ ID No. 2 (corresponding to internal region Z) are linked via a linker Lx (structure Lgg), and RNA of SEQ ID NO: 2 (internal region Z) And the RNA of SEQ ID NO: 1 (corresponding to Yc) are linked via a linker Ly (the structure Lgg). Further, as shown in the following sequence, the RNA sequence of SEQ ID NO: 2 and the RNA sequences of SEQ ID NOs: 1 and 3 have complementary sequences. Therefore, the PK-0052 has a stem structure by self-annealing as shown in the following formula. In the following sequences, the underlined part GUUGUCAUACUUCUCAUGG (SEQ ID NO: 5) is a region involved in suppression of GAPDH gene expression.

PK-0052 expression suppression region (SEQ ID NO: 5)
5'-GUUGUCAUACUUCUCAUGG-3 '

On the other hand, in the same manner as PK-0052 except that the RNA of SEQ ID NO: 2 is used instead of the RNA of SEQ ID NO: 2, and the RNA of SEQ ID NO: 7 is used instead of the RNA of SEQ ID NO: 3, Other ssRNAs of the examples were synthesized. This is hereinafter referred to as PK-0053.

5'-GAA-3 '(SEQ ID NO: 1)
5'-GGCUUUCACUUAUCGUUGAUGGCUUC-3 '(SEQ ID NO: 6)
5'-CCAUCAACGAUAAGUGAAAGCC-3 '(SEQ ID NO: 7)

In the PK-0053, as shown in the following SEQ ID NO: 8, from the 5 ′ side, the RNA of SEQ ID NO: 7, the RNA of SEQ ID NO: 6 and the RNA of SEQ ID NO: 1 are arranged in the above order, RNA of No. 7 (corresponding to Xc) and RNA of SEQ ID No. 6 (corresponding to internal region Z) are linked via a linker Lx (structure Lg), and RNA of SEQ ID NO: 6 (internal region Z) And the RNA of SEQ ID NO: 1 (corresponding to Yc) are linked via a linker Ly (the structure Lgg). Moreover, as shown in the following sequence, the RNA sequence of SEQ ID NO: 6 and the RNA sequences of SEQ ID NOs: 1 and 7 have complementary sequences. Therefore, the PK-0053 has a stem structure by self-annealing as shown in the following formula.

(Reference Example A1)
According to the following scheme 6, dodecanoic acid amidoglycine-4,4′-dimethoxytrityl oxide decanamide phosphoramidite (6) was synthesized. In addition, the structure of “Gly” in the following scheme 6 is as described in the scheme 5. In Scheme 6 below, the NH side of Gly is bonded to Fmoc or a carbonyl carbon, and the carbonyl carbon (CO) side of Gly is bonded to an OH or N atom.

(Gly)
—HN—CH ₂ —CO—

(1) 12-trifluoroacetamidododecanol (Compound 11)
An ethanol solution (100 ml) of 12-aminododecanol (4.81 g, 23.9 mmol) and ethyl trifluoroacetate (6.79 g, 47.8 mmol) was stirred at room temperature overnight. The reaction mixture was concentrated under reduced pressure to give colorless syrup 4-trifluoroacetamidobutanol (11) (6.98 g, q.).

(2) 12- (4,4′-dimethoxytrityloxy) dodecanamine (Compound 12)
Compound 11 (3.00 g, 10.08 mmol) was azeotropically dried three times using anhydrous pyridine. 4,4′-Dimethoxytrityl chloride (4.32 g, 12.1 mmol) and anhydrous pyridine (50 ml) were added to the azeotropic residue, and the mixture was stirred overnight at room temperature. Methanol (10 ml) was added to the resulting reaction mixture, and the mixture was stirred at room temperature for 30 minutes, and then the solvent was distilled off at room temperature under reduced pressure until it became about 30 ml. Thereafter, dichloromethane (200 ml) was added, and the mixture was washed 3 times with saturated aqueous sodium hydrogen carbonate, and further washed with saturated brine. After drying with sodium sulfate, the solvent was distilled off under reduced pressure. Sodium hydroxide (2.02 g, 50.40 mmol) was added to a methanol solution (100 ml) of the crude residue thus obtained, and the mixture was stirred at room temperature overnight. The reaction mixture was concentrated to about 30 ml under reduced pressure, water (100 ml) and dichloromethane (200 ml) were added, and the organic layer was separated. The separated organic layer was washed with saturated brine and dried over sodium sulfate. Thereafter, the desiccant (sodium sulfate) was filtered off and the solvent was distilled off under reduced pressure. The resulting residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (95: 5) + 0.05% pyridine) to give 12- (4,4′-dimethoxytrityloxy) dodecanamine (12) (5. 19 g, q.).

(3) Fmoc-glycine-4,4′-dimethoxytrityl oxide decanamide (Compound 13)
Fmoc-glycine (Fmoc-Gly-OH, purchased from Wako Pure Chemical Industries, Ltd.) (2.00 g, 6.73 mmol), dicyclohexylcarbodiimide (1.66 g, 8.07 mmol) and 1-hydroxybenzotriazole monohydrate (2.31 g, 16.14 mmol) in anhydrous N, N-dimethylformamide (70 ml) was added compound 12 (4.07 g, 8.07 mmol) in anhydrous N, N-dimethylformamide (30 ml) under an argon atmosphere. The mixture was added at room temperature and stirred at room temperature overnight under an argon atmosphere. The produced precipitate was filtered off, and the filtrate was concentrated at 35 ° C. under reduced pressure. Dichloromethane (200 ml) was added to the resulting residue, and the mixture was washed 3 times with saturated aqueous sodium hydrogen carbonate. The organic layer was separated and dried over sodium sulfate, and the solvent was distilled off under reduced pressure. The obtained residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (95: 5) + 0.05% pyridine), and colorless syrup-like Fmoc-glycylglycine-4,4′-dimethoxyxytrityl. Oxybutyl dodecanamide (13) (5.88 g, q.) Was obtained.

(4) Glycine-4,4′-dimethoxytrityl oxide decanamide (Compound 4)
N, N-dimethylformamide (10 ml) and piperidine (4.8 ml) were added to compound 13 (5.88 g, 6.73 mmol) at room temperature and stirred overnight at room temperature. The solvent was distilled off from the reaction mixture under reduced pressure, and the resulting residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (9: 1) + 0.05% pyridine) to give glycine-4,4′-. Dimethoxytrityl oxide decanamide (14) (3.44 g, 91%) was obtained.

(5) Hydroxydodecanoic acid amide glycine-4,4′-dimethoxytrityl oxide decanamide (Compound 15)
Compound 14 (3.15 g, 5.62 mmol) was azeotropically dried three times with anhydrous pyridine, then 12-hydroxydodecanoic acid (3.41 g, 6.74 mmol), 1-ethyl-3- (3- Dimethylaminopropyl) carbodiimide hydrochloride (1.29 g, 6.74 mmol), 1-hydroxybenzotriazole monohydrate (2.06 g, 13.48 mmol), and anhydrous dichloromethane (50 ml) were added at room temperature and stirred for 10 minutes. did. Triethylamine (2.05 g, 20.22 mmol) was added to the mixture thus obtained, and the mixture was stirred overnight at room temperature under an argon atmosphere. Dichloromethane (200 ml) was added to the resulting reaction mixture, and the mixture was washed 3 times with saturated aqueous sodium hydrogen carbonate and once with saturated brine. The organic layer was separated and dried over sodium sulfate, and the solvent was distilled off under reduced pressure. The obtained residue was subjected to silica gel column chromatography (developing solvent: dichloromethane-methanol (95: 5) + 0.05% pyridine) to give a colorless syrup-like hydroxydodecanamidoglycine-4,4′-dimethoxytrityl oxide. Decanamide (15) (2.97 g, 70%) was obtained.

(6) Dodecanoic acid amidoglycine-4,4′-dimethoxytrityl oxide decanamide phosphoramidite (Compound 16)
Compound 15 (2.78 g, 3.76 mmol) was azeotropically dried three times with anhydrous pyridine. Next, diisopropylammonium tetrazolide (772 mg, 4.51 mmol) was added, degassed under reduced pressure, filled with argon gas, and anhydrous acetonitrile (3 ml) was added. Further, 2-cyanoethoxy-N, N, N ′, N′-tetraisopropyl phosphorodiamidite (1.36 g, 4.51 mmol) in anhydrous acetonitrile in dichloromethane (3 ml) was added, and the mixture was stirred at room temperature under an argon atmosphere. Stir for 4 hours. Dichloromethane (150 ml) was added to the resulting reaction mixture, and the mixture was washed twice with saturated aqueous sodium hydrogen carbonate and once with saturated brine. The organic layer was separated and dried over sodium sulfate, and the solvent was distilled off under reduced pressure. The residue was subjected to column chromatography (developing solvent: n-hexane-acetone (7: 3) + 0.05% pyridine) using aminosilica, and dodecanoic acid amidoglycine-4,4′-dimethoxytrityl oxide decanamidophospho The loamidite (16) (2.72 g, 77%, HPLC 98.5%) was obtained. The instrumental analysis value of dodecanoic acid amidoglycine-4,4′-dimethoxytrityl oxide decanamide phosphoramidite (16) is shown below.

Dodecanoic acid amidoglycine-4,4′-dimethoxytrityl oxide decanamide phosphoramidite (16);
¹ H-NMR (CDCl ₃ ): δ = 7.41-7.49 (m, 2H), 7.26-7.30 (m, 6H), 7.17-7.19 (m, 1H), 6.80-6, 83 (m, 4H), 6.46-6.62 (m, 2H), 4.07-4.29 (m, 2H), 3.89 (d, J = 5.4 Hz) , 2H), 3.75-3.87 (m, 4H), 3.67 (s, 6H), 3.47-3.70 (m, 4H), 3.20-3.26 (m, 2H) ), 3.02 (t, J = 6.4 Hz, 2H, CH ₂ ), 2.63 (t, 6.4 Hz, 2H, CH ₃ ), 1.56-1.63 (m, 6H), 1 .47-1.51 (m, 2H), 1.24-1.33 (m, 26H), 1.13-1.20 (m, 12H):
P-NMR (CDCl ₃ ): δ = 146.62.
HPLC: Retention time 5.37 min (Shimadzu SPD-10AV (XBridge OST C18, 4.6 mm × 50 mm))

(Reference Example B1) Solid-phase synthesis of RNA The structure of the portion corresponding to the linker regions (Lx) and (Ly) using the compound 16 of the scheme 6 instead of the compound 6 (monomer of the present invention) of the scheme 5 Was synthesized in the same manner as PK-0052 of Example B1 except that the following Lg was used instead of Lgg.

(Lg)
_{-O (CH 2) 11 CO-} Gly-NH (CH 2) 12 O-

The ssRNA synthesized as described above is hereinafter referred to as PK-0054. In the PK-0054, as shown in the following SEQ ID NO: 9, from the 5 ′ side, the RNA of SEQ ID NO: 3, the RNA of SEQ ID NO: 2, and the RNA of SEQ ID NO: 1 are arranged in the above order, and each RNA Are structures connected via the structure Lg. Further, as shown in the following sequence, the RNA sequence of SEQ ID NO: 2 and the RNA sequences of SEQ ID NOs: 1 and 3 have complementary sequences. For this reason, the PK-0054 has a stem structure by self-annealing as shown in the following formula. In the following sequences, the underlined part GUUGUCAUACUUCUCAUGG (SEQ ID NO: 5) is a region involved in suppression of GAPDH gene expression.

5'-GAA-3 '(SEQ ID NO: 1)
5'-GGCUGUUGUCAUACUUCUCAUGGUUC-3 '(SEQ ID NO: 2)
5'-CAUGAGAAGUAUGACAACAGCC-3 '(SEQ ID NO: 3)

PK-0054 (SEQ ID NO: 9)
5'-CAUGAGAAGUAUGACAACAGCC-Lg-GGCU GUUGUCAUACUUCUCAUGG UUC-Lg-GAA-3 '

Expression suppression region of PK-0054 (SEQ ID NO: 5)
5'-GUUGUCAUACUUCUCAUGG-3 '

On the other hand, in the same manner as PK-0054 except that the RNA of SEQ ID NO: 6 is used instead of the RNA of SEQ ID NO: 2, and the RNA of SEQ ID NO: 7 is used instead of the RNA of SEQ ID NO: 3, ssRNA was synthesized. This is hereinafter referred to as PK-0055.

5'-GAA-3 '(SEQ ID NO: 1)
5'-GGCUUUCACUUAUCGUUGAUGGCUUC-3 '(SEQ ID NO: 6)
5'-CCAUCAACGAUAAGUGAAAGCC-3 '(SEQ ID NO: 7)

In the PK-0055, as shown in SEQ ID NO: 10 below, from the 5 ′ side, the RNA of SEQ ID NO: 7, the RNA of SEQ ID NO: 6 and the RNA of SEQ ID NO: 1 are arranged in the above order, and each RNA Are structures connected via the structure Lg. Moreover, as shown in the following sequence, the RNA sequence of SEQ ID NO: 6 and the RNA sequences of SEQ ID NOs: 1 and 7 have complementary sequences. Therefore, the PK-0055 has a stem structure by self-annealing as shown in the following formula.

PK-0055 (SEQ ID NO: 10)
5'-CCAUCAACGAUAAGUGAAAGCC-Lg-GGCUUUCACUUAUCGUUGAUGGCUUC-Lg-GAA-3 '

(Reference Example A2)
According to the following scheme 7, a monomer that is a raw material for synthesizing a single-stranded nucleic acid containing a proline skeleton was produced.

(1) Fmoc-hydroxyamide-L-proline (Compound 104)
Compound 102 (Fmoc-L-proline), which is the starting material of Scheme 6, was purchased from Tokyo Chemical Industry Co., Ltd. Mixing this compound 102 (10.00 g, 29.64 mmol), 4-amino-1-butanol (3.18 g, 35.56 mmol) and 1-hydroxybenzotriazole (10.90 g, 70.72 mmol), the mixture On the other hand, it was deaerated under reduced pressure and filled with argon gas. To the mixture was added anhydrous acetonitrile (140 mL) at room temperature, and further an anhydrous acetonitrile solution (70 mL) of dicyclohexylcarbodiimide (7.34 g, 35.56 mmol) was added, followed by stirring at room temperature for 15 hours under an argon atmosphere. After completion of the reaction, the produced precipitate was filtered off, and the solvent was distilled off from the collected filtrate under reduced pressure. Dichloromethane (200 mL) was added to the resulting residue and washed with saturated aqueous sodium hydrogen carbonate (200 mL). And after collect | recovering an organic layer and drying with magnesium sulfate, the said organic layer was filtered. About the obtained filtrate, the solvent was distilled off under reduced pressure, and diethyl ether (200 mL) was added to the residue to form a powder. The resulting powder was collected by filtration to obtain a colorless powdery compound 104 (10.34 g, yield 84%). The instrumental analysis results of the compound 104 are shown below.

Fmoc-hydroxyamide-L-proline (104);
¹ H-NMR (CDCl ₃ ): δ 7.76-7.83 (m, 2H, Ar—H), 7.50-7.63 (m, 2H, Ar—H), 7.38-7.43 (M, 2H, Ar-H), 7.28-7.33 (m, 2H, Ar-H), 4.40-4.46 (m, 1H, CH), 4.15-4.31 ( _{m, 2H, CH 2),} 3.67-3.73 (m, 2H, CH 2), 3.35-3.52 (m, 2H, CH 2), 3.18-3.30 (m, _{2H, CH 2), 2.20-2.50 (} m, 4H), 1.81-2.03 (m, 3H), 1.47-1.54 (m, 2H);
MS (FAB +): m / z 409 (M + H ^< + ^> ).

(2) Fmoc-t-butyl-dimethylsiloxyamide-L-proline (Compound 118)
Fmoc-hydroxyamide-L-proline (compound 104) (2.00 g, 30 mmol), t-butyl-dimethylsilyl chloride (1.11 g, 35 mmol) and imidazole (10.90 g, 71 mmol) were mixed. The mixture was degassed under reduced pressure and filled with argon gas. To the mixture was added anhydrous acetonitrile (20 mL) at room temperature, and the mixture was stirred overnight at room temperature under an argon atmosphere. After completion of the reaction, dichloromethane (150 mL) was added to the mixture, washed 3 times with water, and washed with saturated brine. The organic layer was collected and dried over magnesium sulfate, and then the organic layer was filtered. About the obtained filtrate, the solvent was distilled off under reduced pressure, and the residue was subjected to silica gel column chromatography (developing solvent CH ₂ Cl ₂ : CH ₃ OH = 95: 5) to give colorless syrup-like compound 118 (2. 35 g, yield 92%). The instrumental analysis results of the compound 118 are shown below.

Fmoc-t-butyl-dimethylsiloxyamide-L-proline (118);
¹ H-NMR (CDCl ₃ ): δ 7.76-7.78 (m, 2H, Ar—H), 7.50-7.63 (m, 2H, Ar—H), 7.38-7.42 (m, 2H, Ar-H ), 7.29-7.34 (m, 2H, Ar-H), 4.10-4.46 (m, 4H, CH 2), 3.47-3.59 _{(m, 4H, CH 2)} , 3.20-3.26 (m, 2H, CH), 1.85-1.95 (m, 2H), 1.42-1.55 (m, 6H), 0.96 (s, 9H, t- Bu), 0.02 (s, 6H, SiCH 3);
MS (FAB +): m / z 523 (M + H ^< + ^> ).

(3) t-butyl-dimethylsiloxyamide-L-proline (Compound 119)
To the Fmoc-t-butyl-dimethylsiloxyamide-L-proline (Compound 118) (1.18 g, 2.5 mmol) obtained above, anhydrous acetonitrile (5 mL) and piperidine (2.4 mL) were added, Stir at room temperature for 1 hour. After completion of the reaction, acetonitrile (50 mL) was added to the mixture, and insolubles were filtered off. About the obtained filtrate, the solvent was distilled off under reduced pressure, and the obtained residue was subjected to silica gel column chromatography (developing solvent CH ₂ Cl ₂ : CH ₃ OH = 9: 1) to give colorless syrup-like compound 19 ( 0.61 g, yield 90%) was obtained. The instrumental analysis results of the compound 119 are shown below.

t-butyl-dimethylsiloxyamide-L-proline (119);
¹ H-NMR (CDCl ₃ ): δ 3.71 (dd, 1H, J = 9.0 Hz, 5.2 Hz, CH), 3.61-3.64 (m, 2H, CH ₂ ), 3.22- _{3.28 (m, 2H, CH 2} ), 2.98-3.04 (m, 1H, CH), 2.86-2.91 (m, 1H, CH), 2.08-2.17 ( m, 1H, CH), 1.86-1.93 (m, 1H, CH), 1.66-1.75 (m, 2H, CH 2), 1.52-1.57 (m, 4H) , 0.89 (s, 9H, t -Bu), 0.05 (s, 6H, SiCH 3);
MS (FAB +); m / z 301 (M + H ^< + ^> ).

(4) t-butyl-dimethylsiloxyamide hydroxyamide-L-proline (compound 120)
The t-butyl-dimethylsiloxyamide-L-proline (Compound 119) (550 mg, 1.8 mmol), 6-hydroxyhexanoic acid (300 mg, 2.3 mmol), EDC (434 mg, 2.3 mmol) obtained above. , And 1-hydroxybenzotriazole (695 mg, 4.5 mmol) in anhydrous dichloromethane (20 mL). Triethylamine (689 mg, 6.8 mmol) was added to the mixture at room temperature under an argon atmosphere, and then the mixture was stirred overnight at room temperature under an argon atmosphere. The mixture was washed with saturated brine. The organic layer was collected and dried with sodium sulfate, and then the organic layer was filtered. About the obtained filtrate, the solvent was distilled off under reduced pressure. The obtained residue was subjected to silica gel column chromatography (developing solvent CH ₂ Cl ₂ : CH ₃ OH = 9: 1) to obtain a colorless syrup-like compound 120 (696 mg, yield 92%). The instrumental analysis results of the compound 120 are shown below.

t-butyl-dimethylsiloxyamide hydroxyamide-L-proline (120);
¹ H-NMR (CDCl ₃ ): δ 4.54 (d, 1H, CH), 3.58-3.67 (m, 5H), 3.52-3.56 (m, 1H, CH), 3. 32-3.39 (m, 1H), 3.20-3.25 (m, 2H), 2.40-2.43 (m, 1H, CH), 2.33 (t, J = 7.3 Hz) _{, 2H, CH 2), 2.05-2.25} (m, 2H), 1.93-2.03 (m, 1H, CH), 1.75-1.85 (m, 1H, CH), _{1.50-1.73 (m, 8H), 1.37-1.46} (m, 2H, CH 2), 0.87 (s, 9H, t-Bu), 0.04 (s, 6H, SiCH ₃ );
MS (FAB +): m / z 415 (M ⁺⁺ 1).

(5) DMTr-hydroxydiamide-L-proline (Compound 121)
The t-butyl-dimethylsiloxyamide hydroxyamide-L-proline (Compound 120) (640 mg, 1.54 mmol) obtained above was mixed with anhydrous pyridine (1 mL) and azeotropically dried at room temperature. To the obtained residue, 4,4′-dimethoxytrityl chloride (657 mg, 1.85 mmol), DMAP (2 mg) and anhydrous pyridine (5 mL) were added, and the mixture was stirred at room temperature for 4 hours, and then methanol (1 mL) was added. And stirred for 30 minutes at room temperature. The mixture was diluted with dichloromethane and washed with saturated aqueous sodium hydrogen carbonate. The organic layer was collected and dried over sodium sulfate, and then the organic layer was filtered. About the obtained filtrate, the solvent was distilled off under reduced pressure. To the obtained residue were added anhydrous acetonitrile (5 mL) and 1 mol / L tetrabutylammonium fluoride-containing tetrahydrofuran solution (1.42 mL, tetrabutylammonium fluoride 1.42 mmol), and the mixture was stirred at room temperature overnight. After completion of the reaction, ethyl acetate (100 mL) was added to the mixture, washed with water, and then washed with saturated brine. The organic layer was collected and dried over sodium sulfate, and then the organic layer was filtered. About the obtained filtrate, the solvent was distilled off under reduced pressure. The obtained residue was subjected to silica gel column chromatography (developing solvent CH ₂ Cl ₂ : CH ₃ OH = 95: 5, containing 0.05% pyridine) to give colorless syrup-like compound 121 (680 mg, yield 73%). Got. The instrumental analysis results of the compound 121 are shown below.

DMTr-hydroxydiamide-L-proline (121);
¹ H-NMR (CDCl ₃ ): δ 7.41-7.44 (m, 2H, Ar—H), 7.26-7.33 (m, 4H, Ar—H), 7.18-7.21 (M, 2H, Ar-H), 7.17-7.21 (m, 1H, Ar-H), 6.80-6.84 (m, 4H, Ar-H), 4.51-4. 53 (d, 6.8 Hz, 1 H, CH), 3.79 (s, 6 H, OCH ₃ ), 3.61 (dd, 2 H, J = 11 Hz, 5.4 Hz, CH ₂ ), 3.50-3 .54 (m, 1H, CH) , 3.36-3.43 (m, 1H, CH), 3.20-3.26 (m, 2H, CH 2), 3.05 (t, J = 6 .4 Hz, 2 H, CH ₂ ), 2.38-2.45 (m, 1 H, CH), 2.30 (t, J = 7.8 Hz, 2 H, CH ₂ ), 2.05-2.25 ( m, 1H, C H), 1.92-2.00 (m, 1H, CH), 1.75-1.83 (m, 1H, CH), 1.52-1.67 (m, 8H), 1.35 _{1.45 (m, 2H, CH 2} );
MS (FAB +): m / z 602 (M ^<+> ), 303 (DMTr ^<+> ).

(6) DMTr-diamide-L-proline amidite type B (Compound 122)
The DMTr-hydroxydiamide-L-proline (Compound 121) (637 mg, 1.06 mmol) obtained above was mixed with anhydrous acetonitrile and azeotropically dried at room temperature. Diisopropylammonium tetrazolide (201 mg, 1.16 mmol) was added to the obtained residue, degassed under reduced pressure, and filled with argon gas. Anhydrous acetonitrile (1 mL) was added to the mixture, and an anhydrous acetonitrile solution (1 mL) of 2-cyanoethoxy-N, N, N ′, N′-tetraisopropyl phosphorodiamidite (350 mg, 1.16 mmol) was further added. added. The mixture was stirred for 4 hours at room temperature under an argon atmosphere. The mixture was diluted with dichloromethane and washed with saturated aqueous sodium hydrogen carbonate and saturated brine. The organic layer was collected and dried over sodium sulfate, and then the organic layer was filtered. About the obtained filtrate, the solvent was distilled off under reduced pressure. The obtained residue was subjected to column chromatography using amino silica gel as a filler (developing solvent hexane: acetone = 7: 3) to give colorless syrup-like compound 122 (680 mg, purity 95%, yield 76%). Obtained. The instrumental analysis results of the compound 122 are shown below.

DMTr-diamide-L-proline amidite (122);
¹ H-NMR (CDCl ₃ ): δ 7.41-7.43 (m, 2H, Ar—H), 7.25-7.32 (m, 4H, Ar—H), 7.17-7.22 (M, 2H, Ar-H), 6.80-6.83 (m, 4H, Ar-H), 4.53 (d, J = 7.8 Hz, 1H, CH), 3.75-3. 93 (m, 3H), 3.79 (s, 6H, OCH ₃ ), 3.46-3.68 (m, 5H), 3.34-3.41 (m, 1H, CH), 3.10 −3.31 (m, 1H, CH), 3.05 (t, J = 6.3 Hz, 2H, CH ₂ ), 2.62 (t, J = 6.3 Hz, 2H, CH ₂ ), 2. _{39-2.46 (m, 1H, CH)} , 2.29 (t, 7.3Hz, 2H, CH 2), 2.03-2.19 (m, 1H, CH), 1.90-2. 00 (m, 1H, CH , 1.70-1.83 (m, 1H, CH ), 1.51-1.71 (m, 8H), 1.35-1.45 (m, 2H, CH 2), 1.18 (d , J = 6.4 Hz, 6H, CH ₃ ), 1.16 (d, J = 6.4 Hz, 6H, CH ₃ );
_{P-NMR (CH 3 CN)} δ146.90;
MS (FAB +): m / z 803 (M ⁺⁺ 1), 303 (DMTr ⁺ ).

(Reference Example B2) Solid phase synthesis of RNA The compound 22 was used in place of the compound 6 (monomer of the present invention) in the scheme 5, and the structure of the portion corresponding to the linker regions (Lx) and (Ly) was Single-stranded RNA (ssRNA) was synthesized in the same manner as PK-0052 of Example B1 except that the following Lp was used instead of Lgg.

The ssRNA synthesized as described above is hereinafter referred to as PK-0004. In the PK-0004, as shown in SEQ ID NO: 11 below, from the 5 ′ side, the RNA of SEQ ID NO: 3, the RNA of SEQ ID NO: 2, and the RNA of SEQ ID NO: 1 are arranged in the above order, and each RNA Are structures connected via the structure Lp. Further, as described in Example B1, the RNA sequence of SEQ ID NO: 2 and the RNA sequences of SEQ ID NOs: 1 and 3 have complementary sequences. Therefore, the PK-0004 has a stem structure by self-annealing as shown in the following formula. As in the case of PK-0052, the underlined part GUGUCAUACUUCUCAUGG (SEQ ID NO: 5) is a region involved in suppression of GAPDH gene expression.

5'-GAA-3 '(SEQ ID NO: 1)
5'-GGCUGUUGUCAUACUUCUCAUGGUUC-3 '(SEQ ID NO: 2)
5'-CAUGAGAAGUAUGACAACAGCC-3 '(SEQ ID NO: 3)

PK-0004 (SEQ ID NO: 11)
5'-CAUGAGAAGUAUGACAACAGCC-Lp-GGCU GUUGUCAUACUUCUCAUGG UUC-Lp-GAA-3 '

Expression suppression region of PK-0004 (SEQ ID NO: 5)
5'-GUUGUCAUACUUCUCAUGG-3 '

On the other hand, in the same manner as PK-0004, except that the RNA of SEQ ID NO: 2 is used instead of the RNA of SEQ ID NO: 2, and the RNA of SEQ ID NO: 7 is used instead of the RNA of SEQ ID NO: 3, Another ssRNA of Reference Example was synthesized. This is hereinafter referred to as PK-0003.

5'-GAA-3 '(SEQ ID NO: 1)
5'-GGCUUUCACUUAUCGUUGAUGGCUUC-3 '(SEQ ID NO: 6)
5'-CCAUCAACGAUAAGUGAAAGCC-3 '(SEQ ID NO: 7)

In the PK-0003, as shown in SEQ ID NO: 10 below, from the 5 ′ side, the RNA of SEQ ID NO: 7, the RNA of SEQ ID NO: 6, and the RNA of SEQ ID NO: 1 are arranged in the above order, and each RNA Are structures connected via the structure Lp. Similarly to PK-0053 of Example B1, the RNA sequence of SEQ ID NO: 6 and the RNA sequences of SEQ ID NOs: 1 and 7 have complementary sequences. For this reason, the PK-0003 takes a stem structure by self-annealing as shown in the following formula.

PK-0003 (SEQ ID NO: 12)
5'-CCAUCAACGAUAAGUGAAAGCC-Lp-GGCUUUCACUUAUCGUUGAUGGCUUC-Lp-GAA-3 '

(Example B2) GAPDH gene expression suppression effect in HCT116 cells Using the RNA of the present invention, in vitro suppression of GAPDH gene expression was confirmed.

(1) Material and Method As the RNA (Ex) of the example, the ssRNA (PK-0052 and PK-0053) of Example B1 was used. Moreover, the ssRNAs of Reference Example B1 (PK-0054 and PK-0055) and the ssRNAs of Reference Example B2 (PK-0004 and PK-0003) were also used as RNAs of Reference Examples. Each RNA was dissolved in distilled water for injection (Otsuka Pharmaceutical Co., Ltd., the same shall apply hereinafter) to obtain a desired concentration (10 μmol / L) to prepare an RNA solution.

The cells used were HCT116 cells (DS Pharma Biomedical), the medium was McCoy's 5A (Invitrogen) medium containing 10% FBS, and the culture conditions were 37 ° C. and 5% CO ₂ .

First, HCT116 cells were cultured in the above medium, and the culture solution was dispensed into a 24-well plate in an amount of 400 μl at 2 × 10 ⁴ cells / well. Furthermore, after culturing the cells in the well for 24 hours, the RNA was transfected using the transfection reagent Lipofectamine 2000 (Invitrogen) according to the protocol attached to the transfection reagent. Specifically, the composition per well was set as follows, and transfection was performed. In the well, the final concentration of the RNA was 1 nmol / L, 5 nmol / L, and 25 nmol / L.

  After transfection, the cells in the wells were cultured for 48 hours, and RNA was collected using RNeasy Mini Kit (Qiagen, The Netherlands) according to the attached protocol. Next, cDNA was synthesized from the RNA using reverse transcriptase (trade name SuperScript III, Invitrogen) according to the attached protocol. Then, as shown below, PCR was performed using the synthesized cDNA as a template, and the expression level of the GAPDH gene and the expression level of the internal standard β-actin gene were measured. The expression level of the GAPDH gene was corrected by the expression level of the β-actin gene.

In the PCR, LightCycler FastStart DNA Master SYBR Green I (trade name, Roche) was used as a reagent, and Light Cycler DX400 (trade name, Roche) was used as an instrument (hereinafter the same). The following primer sets were used for amplification of the GAPDH gene and β-actin gene, respectively.
PCR primer set for GAPDH gene
5'-GGAGAAGGCTGGGGCTCATTTGC-3 '(SEQ ID NO: 13)
5'-TGGCCAGGGGTGCTAAGCAGTTG-3 '(SEQ ID NO: 14)
Primer set for β-actin gene
5'-GCCACGGCTGCTTCCAGCTCCTC-3 '(SEQ ID NO: 15)
5'-AGGTCTTTGCGGATGTCCACGTCAC-3 '(SEQ ID NO: 16)

  As a control 1, the gene expression level was also measured for cells to which only 100 μL of the solution (B) was added (−). In addition, as a control 2, in the case of transfection, the above RNA solution was not added, and the cells treated in the same manner except that (A) 1.5 μl and (B) were added in total 100 μl were also used for gene expression. The amount was measured (mock).

  Regarding the corrected GAPDH gene expression level, the expression level of the control (-) cells was taken as 1, and the relative value of the expression level of the cells into which each RNA was introduced was determined.

(2) Results These results are shown in FIG. FIG. 4 is a graph showing the relative value of the GAPDH gene expression level, and the vertical axis represents the relative gene expression level.

  As shown in FIG. 4, PK-0004, PK-0052 and PK-0054 incorporated a sequence targeting human GAPDH, and thus showed an expression suppression effect. In contrast, PK-0003, PK-0053, and PK-0055 were less effective in suppressing expression compared to PK-0004 and PK-0054 because of the different sequences. That is, these RNAs were excellent in reaction specificity for the target base sequence.

  Moreover, since PK-0052, which is the ssRNA of the example, is ssRNA (single-stranded RNA), it can be easily and efficiently produced as compared with siRNA (double-stranded RNA), and It was easy to handle.

  Furthermore, PK-0052, which is the ssRNA of the example, showed an expression suppression effect superior to PK-0054 and PK-0004, which are the ssRNAs of the reference examples. In addition, the starting material for synthesis is L-proline in PK-0004, whereas glycylglycine is used in PK-0052, and PK-0052 is much cheaper and more easily available. It is overwhelmingly advantageous in terms of simplicity and cost.

(Reference Example 1)
Inhibition of GAPDH gene expression in vitro was confirmed using ssRNA with different free base positions.

(1) Material and Method As the RNA, ssRNA shown in FIG. 5 was used. In FIG. 5, the number at the right end indicates a sequence number. In FIG. 5, from the 5 ′ side, the lower case underline region indicates the region (Xc), the upper case underline region indicates the internal region (Z), and the lower case underline region indicates the region (Yc). Between Xc and Z is a linker region (Lx), and between Z and Yc is a linker region (Ly). “Xc / Yc” indicates a ratio between the base length (Xc) of the region (Xc) and the base length (Yc) of the region (Yc). In FIG. 5, “*” indicates a free base.

  In each ssRNA, the base length of the internal region (Z) was 26 bases, the base length of the linker region (Lx) was 7 bases, and the base length of the linker region (Ly) was 4 bases. Further, NK-0036 and NK-0040 have a total base number (Xc + Yc) of the region (Xc) and the region (Yc) of 26 bases, and other than that, the region (Xc) and the region (Yc) The total number of bases (Xc + Yc) was 25 bases. Under these conditions, the base lengths of the region (Xc) and the region (Yc) were changed. As a result, NK-0036 and NK-0040 were molecules having no free base. In addition, each ssRNA other than these has all the free bases that do not form a double strand in the internal region (Z) as one base, and the position of the free base in the internal region (Z) from the 3 ′ side. Fluctuated to 5 'side.

  Except that the RNA was used, transfection into HCT116 cells, culture, RNA recovery, cDNA synthesis and PCR were carried out in the same manner as in Example B2, and the relative expression level of the GAPDH gene was measured. The RNA concentration at the time of transfection was 10 nmol / L.

(2) Results and discussion These results are shown in FIG. FIG. 6 is a graph showing the relative value of GAPDH gene expression level when RNA having a final concentration of 10 nmol / L is used. As shown in FIG. 6, suppression of the expression of the GAPDH gene could be confirmed for any ssRNA in which the lengths of the 5 ′ side region (Xc) and the 3 ′ side region (Yc) were changed.

  In particular, it was confirmed that as the difference between the base length of the region (Xc) and the base length of the region (Yc) increased, the gene expression level decreased relatively and the expression suppression activity increased. That is, it was found that the expression suppression activity can be improved as the position of the free base in the inner region (Z) is arranged 5 'or 3' from the center of the inner region.

(Reference Example 2)
Using ssRNA with different free base positions, the effect of suppressing the expression of TGF-β1 gene in vitro was confirmed.

(1) Material and method As RNA, ssRNA shown below was used. In the following sequences, “*” indicates a free base.

(1.2) Inhibition of gene expression The cryopreserved RNA was dissolved in distilled water for injection so as to be 20 μmol / L to prepare an RNA solution. Then, transfection of the ssRNA into Hepal-6 cells, RNA recovery, cDNA synthesis and PCR were carried out in the same manner as in Example B9 except that the RNA solution was used. The relative expression level of the TGF-β1 gene was measured. The RNA concentration at the time of transfection was 1 nmol / L.

(2) Results These results are shown in FIG. FIG. 7 is a graph showing the relative value of the expression level of TGF-β1 gene. As shown in FIG. 7, all ssRNAs showed gene expression inhibitory activity. In addition, NK-0055 and NK-0062, in which the position of the free base is second and third from the 3 ′ end in the internal region (Z), the position of the free base is 3 ′ in the internal region (Z). It showed higher expression inhibitory activity than NK-0033 and NK-0061, which were fourth and fifth from the end. This result was the same behavior as in Reference Example 1 targeting different genes.

(Reference Example 3)
Inhibition of LAMA1 gene expression in vitro was confirmed using ssRNA with different free base positions.

(1) Material and method As RNA, ssRNA shown below was used. In the following sequences, “*” indicates a free base.

Except that the RNA was used, 293 cells were transfected as in Example B6, and the cells were cultured for 48 hours. The RNA concentration at the time of transfection was 10 nmol / L. Then, except that the following primer set for LAMA1 gene was used as a primer, RNA recovery, cDNA synthesis and PCR were performed in the same manner as in Example B2, and the expression level of LAMA1 gene and β-actin as an internal standard were used. The expression level of the gene was measured. The expression level of the LAMA1 gene was corrected by the expression level of the β-actin gene which is an internal standard.
Primer set for LAMA1 gene
5'-AAAGCTGCCAATGCCCCTCGACC-3 '(SEQ ID NO: 50)
5'-TAGGTGGGTGGCCCTCGTCTTG-3 '(SEQ ID NO: 51)

  In the same manner as in Example B2, the expression level was also measured for control 1 (−) and control 2 (mock). Then, with respect to the corrected LAMA1 gene expression level, the expression level of the control (−) cell was set to 1, and the relative value of the expression level of the cell into which each RNA was introduced was determined.

(2) Results These results are shown in FIG. FIG. 8 is a graph showing the relative value of the expression level of the LAMA1 gene in 293 cells. As shown in FIG. 8, all ssRNAs showed gene expression suppression activity. Further, NK-0064 in which the position of the free base is second from the 3 ′ end in the internal region (Z) is NK-0064 in which the position of the free base is fourth from the 3 ′ end in the internal region (Z). It showed a higher expression inhibitory activity than -0043. This result was the same behavior as Reference Example 1 and Reference Example 2 targeting different genes.

(Reference Example 4)
Inhibition of LMNA gene expression in vitro was confirmed using ssRNAs with different free base positions.

(1) Material and method As RNA, ssRNA shown below was used. In the following sequences, “*” indicates a free base.

Except that the RNA was used, A549 cells were transfected in the same manner as in Example B6, and the cells were cultured for 48 hours. The RNA concentration at the time of transfection was 3 nmol / L. Then, except that the following primer set for LMNA gene was used as a primer, RNA recovery, cDNA synthesis and PCR were carried out in the same manner as in Example B2, and the expression level of LMNA gene and β-actin as an internal standard were used. The expression level of the gene was measured. The expression level of the LMNA gene was corrected by the expression level of the β-actin gene which is an internal standard.
LMNA gene primer set
5'-CTGGACATCAAGCTGGCCCTGGAC-3 '(SEQ ID NO: 54)
5'-CACCAGCTTGCGCATGGCCACTTC-3 '(SEQ ID NO: 55)

  In the same manner as in Example B2, the expression level was also measured for control 1 (−) and control 2 (mock). Then, regarding the corrected LMNA gene expression level, the expression level of the control (−) cell was set to 1, and the relative value of the expression level of the cell into which each RNA was introduced was determined.

(2) Results These results are shown in FIG. FIG. 9 is a graph showing the relative value of the expression level of the LMNA gene in A549 cells. As shown in FIG. 9, all ssRNAs showed gene expression inhibitory activity. In addition, NK-0066 in which the position of the free base is second from the 3 ′ end in the internal region (Z) is NK-0066 in which the position of the free base is fourth from the 3 ′ end in the internal region (Z). It showed higher expression inhibitory activity than -0063. This result was the same behavior as in Reference Examples 1 to 3 targeting different genes.

  From the results of Reference Examples 1 to 4, for example, regarding the position of the free base, it is clear that the same behavior is exhibited regardless of the type of the target gene and the expression suppression sequence thereto. In Example B9, the same behavior as those of the reference examples is as described above.

(Reference Example 5)
Using ssRNA in which each length of the inner 5 ′ side region (X), the 5 ′ side region (Xc), the inner 3 ′ side region (Y) and the 3 ′ side region (Yc) is changed, In vitro suppression of GAPDH gene expression was confirmed.

(1) Material and Method As the RNA, ssRNA shown in FIG. 10 was used. In FIG. 22, the number at the right end indicates a sequence number. In FIG. 10, from the 5 ′ side, the lowercase underlined area indicates the area (Xc), the uppercase underlined area indicates the internal area (Z), and the lowercase underlined area indicates the area (Yc). “Xc + Yc / X + Y” indicates a ratio of the total base length of the region (Xc) and the region (Yc) to the total base length of the region (X) and the region (Y). In FIG. 10, “*” indicates a free base.

  Each ssRNA has a base length of the linker region (Lx) of 7 bases, a base length of the linker region (Ly) of 4 bases, a base length of the region (Yc) of 1 base, and the internal region (Z). The second base from the 3 ′ side of was used as a free base. Then, the base length of the internal region (Z) and the base length of the region (Xc) were varied.

Unless otherwise indicated, in the same manner as in Example B2, transfection of HCT116 cells, culture, RNA recovery, cDNA synthesis and PCR were performed on the RNA, and the relative value of the expression level of the GAPDH gene was calculated. The transfection conditions were such that the composition per well was the same as in Table 2 below.

(2) Results and Discussion These results are shown in FIG. FIG. 11 is a graph showing the relative value of GAPDH gene expression level when RNA having a final concentration of 1 nmol / L is used. As shown in FIG. 11, suppression of GAPDH gene expression was confirmed for any ssRNA in which the length of the region (X), the region (Xc), the region (Y), and the region (Yc) was changed. did it.

  While the present invention has been described with reference to the embodiments, the present invention is not limited to the above embodiments. Various changes that can be understood by those skilled in the art can be made to the configuration and details of the present invention within the scope of the present invention.

  According to the ssPN molecule of the present invention, gene expression can be suppressed, and since it is not circular, its synthesis is easy, and since it is single-stranded, there is no double-stranded annealing step, It can be manufactured efficiently. In addition, since the linker region includes the non-nucleotide residue, for example, it is not limited to the conventional modification of nucleotide residues, and for example, modification such as modification in the linker region can be performed. Thus, since the ssPN molecule of the present invention can suppress the expression of the target gene as described above, it is useful, for example, as a research tool for pharmaceuticals, diagnostic agents and agricultural chemicals, and agricultural chemicals, medicine, life sciences, etc. It is.

Claims (53)

A single-stranded nucleic acid molecule comprising an expression suppressing sequence that suppresses the expression of a target gene,
Comprising region (X), linker region (Lx) and region (Xc);
The linker region (Lx) is connected between the region (X) and the region (Xc),
The region (Xc) is complementary to the region (X);
At least one of the region (X) and the region (Xc) includes the expression suppression sequence,
The single-stranded nucleic acid molecule, wherein the linker region (Lx) includes a peptide structure. The single-stranded nucleic acid molecule according to claim 1, wherein the linker region (Lx) is represented by the following formula (I).

In the formula (I),
X ¹ and X ² are each independently H ₂ , O, S or NH;
Y ¹ and Y ² are each independently a single bond, CH ₂ , NH, O or S;
L ¹ is an alkylene chain having n carbon atoms, and a hydrogen atom on the alkylene carbon atom is substituted with OH, OR ^a , NH ₂ , NHR ^a , NR ^a R ^b , SH, or SR ^a May not be substituted, or
L ¹ is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ¹ is NH, O or S, the atom of L ¹ bonded to Y ¹ is carbon, the atom of L ¹ bonded to OR ¹ is carbon, and oxygen atoms are not adjacent to each other;
L ² is an alkylene chain having m carbon atoms, and a hydrogen atom on the alkylene carbon atom may be substituted with OH, OR ^c , NH ₂ , NHR ^c , NR ^c R ^d , SH or SR ^c. May not be substituted, or
L ² is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ² is NH, O or S, the atom of L ² bonded to Y ² is carbon, the atom of L ² bonded to OR ² is carbon, and oxygen atoms are not adjacent to each other;
R ^a , R ^b , R ^c and R ^d are each independently a substituent or a protecting group;
m is an integer in the range of 0-30;
n is an integer in the range of 0-30;
The region (Xc) and the region (X) each bind to the linker region (Lx) via —OR ¹ — or —OR ² —,
Wherein R ¹ and R ² may or may not be present, and when present, R ¹ and R ² are each independently a nucleotide residue or the structure (I);
Pe is an arbitrary atomic group including a peptide bond, provided that the following formula (Ia) is a peptide.

In the formula (I),
Pe includes at least one selected from the group consisting of a chain group, an alicyclic group, an aromatic group, a heteroaromatic group, and a heteroalicyclic group, The single-stranded nucleic acid molecule according to claim 2, wherein the group may or may not further have a substituent or a protecting group. The single-stranded nucleic acid molecule according to any one of claims 1 to 3, wherein the amino acid constituting the peptide is at least one of a natural amino acid and an artificial amino acid. The single-stranded nucleic acid molecule according to any one of claims 1 to 3, wherein the amino acid constituting the peptide is an amino acid constituting a protein. The amino acids constituting the peptide are glycine, α-alanine, arginine, asparagine, aspartic acid, cysteine, cystine, glutamine, glutamic acid, histidine, isoleucine, leucine, lysine, hydroxylysine, methionine, phenylalanine, serine, threonine, tyrosine, The amino acid is at least one selected from the group consisting of valine, proline, 4-hydroxyproline, tryptophan, β-alanine, 1-amino-2-carboxycyclopentane, aminobenzoic acid and aminopyridinecarboxylic acid, Furthermore, the single-stranded nucleic acid molecule according to any one of claims 1 to 3, which may or may not have a substituent or a protecting group. The number of bases (X) in the region (X) and the number of bases (Xc) in the 5 'side region (Xc) satisfy the condition of the following formula (3) or formula (5): A single-stranded nucleic acid molecule according to claim 1.
X> Xc (3)
X = Xc (5) The single-stranded nucleic acid molecule according to claim 7, wherein the number of bases (X) in the region (X) and the number of bases (Xc) in the 5 'side region (Xc) satisfy the condition of the following formula (11).
X−Xc = 1, 2 or 3 (11) The single-stranded nucleic acid molecule according to any one of claims 1 to 8, wherein the number of bases (Xc) in the region (Xc) is 19 to 30 bases. Furthermore, it has a region (Y) and a region (Yc),
The region (Yc) is complementary to the region (Y);
The single-stranded nucleic acid molecule according to any one of claims 1 to 9, wherein the region (X) and the region (Y) are linked to form an internal region (Z). Furthermore, it has a linker region (Ly),
The single-stranded nucleic acid molecule according to claim 10, wherein the linker (Ly) is linked between the region (Y) and the region (Yc). The single-stranded nucleic acid molecule according to claim 11, wherein the linker region (Ly) is represented by the following formula (I).

In the formula (I),
X ¹ and X ² are each independently H ₂ , O, S or NH;
Y ¹ and Y ² are each independently a single bond, CH ₂ , NH, O or S;
L ¹ is an alkylene chain having n carbon atoms, and a hydrogen atom on the alkylene carbon atom is substituted with OH, OR ^a , NH ₂ , NHR ^a , NR ^a R ^b , SH, or SR ^a May not be substituted, or
L ¹ is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ¹ is NH, O or S, the atom of L ¹ bonded to Y ¹ is carbon, the atom of L ¹ bonded to OR ¹ is carbon, and oxygen atoms are not adjacent to each other;
L ² is an alkylene chain having m carbon atoms, and a hydrogen atom on the alkylene carbon atom may be substituted with OH, OR ^c , NH ₂ , NHR ^c , NR ^c R ^d , SH or SR ^c. May not be substituted, or
L ² is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ² is NH, O or S, the atom of L ² bonded to Y ² is carbon, the atom of L ² bonded to OR ² is carbon, and oxygen atoms are not adjacent to each other;
R ^a , R ^b , R ^c and R ^d are each independently a substituent or a protecting group;
m is an integer in the range of 0-30;
n is an integer in the range of 0-30;
The region (Yc) and the region (Y) each bind to the linker region (Ly) through —OR ¹ — or —OR ² —,
Wherein R ¹ and R ² may or may not be present, and when present, R ¹ and R ² are each independently a nucleotide residue or the structure (I);
Pe is an arbitrary atomic group containing a peptide bond, provided that the following formula (Ia) is a peptide:

When the linker region (Lx) is represented by the formula (I), X ¹ , X ² , Y ¹ , Y ² , L ¹ , L in the linker region (Lx) and the linker region (Ly) ² , R ¹ and R ² may be the same or different. Binding of the region (Xc) and the region (X) to the structure of the formula (I) of the linker region (Lx), and
Bonds between the region (Yc) and the region (Y) and the structure of the formula (I) of the linker region (Ly) satisfy any one of the following conditions (1) to (4) The single-stranded nucleic acid molecule according to claim 12.
Condition (1)
The region (Xc) is bonded to the structure of the formula (I) through —OR ² —, the region (X) is bonded through —OR ¹ —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ¹ —, and the region (Y) is bonded through —OR ² —.
Condition (2)
The region (Xc) is bonded to the structure of the formula (I) through —OR ² —, the region (X) is bonded through —OR ¹ —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ² —, and the region (Y) is bonded through —OR ¹ —.
Condition (3)
The region (Xc) is bonded to the structure of the formula (I) through —OR ¹ —, the region (X) is bonded through —OR ² —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ¹ —, and the region (Y) is bonded through —OR ² —.
Condition (4)
The region (Xc) is bonded to the structure of the formula (I) through —OR ¹ —, the region (X) is bonded through —OR ² —,
The region (Yc) is bonded to the structure of the formula (I) through —OR ² —, and the region (Y) is bonded through —OR ¹ —. The single-stranded nucleic acid molecule according to any one of claims 2 to 13, wherein, in the formula (I), L ¹ is the polyether chain, and the polyether chain is polyethylene glycol. 15. The formula (I), wherein the total number (m + n) of the number of atoms (n) of L ^{1 and} the number of atoms (m) of L ² is in the range of 0-30. A single-stranded nucleic acid molecule according to 1. The structure of the formula (I) is the following formula (I-1) or (I-2), in which n is an integer of 0 to 30, and m is an integer of 0 to 30. Item 16. The single-stranded nucleic acid molecule according to any one of Items 2 to 15.

The single-stranded nucleic acid molecule according to claim 16, wherein in the formula (I-1), n = 5 and m = 4. The number of bases (X) in the region (X), the number of bases (Y) in the region (Y), the number of bases (Xc) in the region (Xc), and the number of bases (Yc) in the region (Yc) are as follows: The single-stranded nucleic acid molecule according to any one of claims 7 to 17, which satisfies the condition of formula (2).
Z ≧ Xc + Yc (2) The number of bases (X) in the region (X), the number of bases (Xc) in the (Xc), the number of bases (Y) in the region (Y), and the number of bases (Yc) in the region (Yc) are as follows: The single-stranded nucleic acid molecule according to any one of claims 7 to 18, which satisfies any one of conditions a) to (d).
(A) Satisfy the conditions of the following formulas (3) and (4).
X> Xc (3)
Y = Yc (4)
(B) The conditions of the following formulas (5) and (6) are satisfied.
X = Xc (5)
Y> Yc (6)
(C) The conditions of the following formulas (7) and (8) are satisfied.
X> Xc (7)
Y> Yc (8)
(D) The conditions of the following formulas (9) and (10) are satisfied.
X = Xc (9)
Y = Yc (10) In (a) to (d), the difference between the number of bases (X) in the region (X) and the number of bases (Xc) in the region (Xc), the number of bases (Y) in the region (Y) and the region The single-stranded nucleic acid molecule according to claim 19, wherein the difference in the number of bases (Yc) of (Yc) satisfies the following condition.
(A) The conditions of the following formulas (11) and (12) are satisfied.
X−Xc = 1, 2 or 3 (11)
Y−Yc = 0 (12)
(B) The conditions of the following formulas (13) and (14) are satisfied.
X−Xc = 0 (13)
Y−Yc = 1, 2 or 3 (14)
(C) The conditions of the following formulas (15) and (16) are satisfied.
X−Xc = 1, 2 or 3 (15)
Y−Yc = 1, 2 or 3 (16)
(D) The conditions of the following formulas (17) and (18) are satisfied.
X−Xc = 0 (17)
Y−Yc = 0 (18) The single-stranded nucleic acid molecule according to any one of claims 7 to 20, wherein the number of bases (Xc) in the region (Xc) is 1 to 11 bases. The single-stranded nucleic acid molecule according to claim 21, wherein the number of bases (Xc) in the region (Xc) is 1 to 7 bases. The single-stranded nucleic acid molecule according to claim 21, wherein the number of bases (Xc) in the region (Xc) is 1 to 3 bases. The single-stranded nucleic acid molecule according to any one of claims 7 to 23, wherein the number of bases (Yc) of the region (Yc) is 1 to 11 bases. The single-stranded nucleic acid molecule according to claim 24, wherein the number of bases (Yc) in the region (Yc) is 1 to 7 bases. The single-stranded nucleic acid molecule according to claim 24, wherein the number of bases (Yc) in the region (Yc) is 1 to 3 bases. 27. A single-stranded nucleic acid molecule according to any one of claims 1 to 26, comprising at least one modified residue. The single-stranded nucleic acid molecule according to any one of claims 1 to 27, which comprises a labeling substance. The single-stranded nucleic acid molecule according to any one of claims 1 to 28, comprising a stable isotope. 30. A single-stranded nucleic acid molecule according to any one of claims 1 to 29, which is an RNA molecule. The single-stranded nucleic acid molecule according to any one of claims 1 to 30, wherein the total number of bases in the single-stranded nucleic acid molecule is 50 bases or more. The single-stranded nucleic acid molecule according to any one of claims 1 to 31, wherein the suppression of gene expression is suppression of expression by RNA interference. A composition for suppressing the expression of a target gene,
An expression suppression composition comprising the single-stranded nucleic acid molecule according to any one of claims 1 to 32. A pharmaceutical composition characterized in that it comprises a single-stranded nucleic acid molecule according to any one of claims 1 to 32. The pharmaceutical composition according to claim 34, which is used for treating inflammation. A method for suppressing the expression of a target gene,
A single-stranded nucleic acid molecule according to any one of claims 1 to 32 is used. The expression suppression method according to claim 36, comprising a step of administering the single-stranded nucleic acid molecule to a cell, tissue or organ. The expression suppression method according to claim 37, wherein the single-stranded nucleic acid molecule is administered in vivo or in vitro. The expression suppression method according to any one of claims 36 to 38, wherein the expression suppression of the gene is expression suppression by RNA interference. A method of inducing RNA interference that suppresses expression of a target gene,
33. A method for inducing expression, comprising using the single-stranded nucleic acid molecule according to any one of claims 1 to 32. Use of the single-stranded nucleic acid molecule according to any one of claims 1 to 32 for suppressing expression of a target gene. 33. Use of a single stranded nucleic acid molecule according to any one of claims 1 to 32 for the induction of RNA interference. A nucleic acid molecule for use in the treatment of a disease,
The nucleic acid molecule is a single-stranded nucleic acid molecule according to any one of claims 1 to 32,
The single-stranded nucleic acid molecule, wherein the single-stranded nucleic acid molecule has a sequence that suppresses the expression of a gene causing the disease as the expression-suppressing sequence. A monomer for nucleic acid molecule synthesis,
A monomer having the structure of the following formula (II):

In the above formula,
X ¹ and X ² are each independently H ₂ , O, S or NH;
Y ¹ and Y ² are each independently a single bond, CH ₂ , NH, O or S;
R ¹¹ and R ²¹ are each independently H, a protecting group or a phosphate protecting group;
L ¹ is an alkylene chain having n carbon atoms, and a hydrogen atom on the alkylene carbon atom is substituted with OH, OR ^a , NH ₂ , NHR ^a , NR ^a R ^b , SH, or SR ^a May not be substituted, or
L ¹ is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, when Y ¹ is NH, O or S, the atom of L ¹ bonded to Y ¹ is carbon, the atom of L ¹ bonded to OR ¹¹ is carbon, and oxygen atoms are not adjacent to each other;
L ² is an alkylene chain having m carbon atoms, and a hydrogen atom on the alkylene carbon atom may be substituted with OH, OR ^c , NH ₂ , NHR ^c , NR ^c R ^d , SH or SR ^c. May not be substituted, or
L ² is a polyether chain in which one or more carbon atoms of the alkylene chain are substituted with an oxygen atom,
However, ^{Y 2} is, NH, for O or S, atoms of ^{L 2} that bind to ^{Y 2} is carbon, atoms of ^{L 2} that bind to OR ²¹ is carbon, between the oxygen atom is not adjacent;
R ^a , R ^b , R ^c and R ^d are each independently a substituent or a protecting group;
m is an integer in the range of 0-30;
n is an integer in the range of 0-30;
Pe is an arbitrary atomic group including a peptide bond, provided that the following formula (Ia) is a peptide.

The structure of the formula (II) is the following formula (II-1) or (II-2), in which n is an integer of 0 to 30, and m is an integer of 0 to 30. Item 44. The monomer according to item 44.

The monomer according to claim 45, wherein in the formula (II-1), n = 5 and m = 4. In the formula (II), L ¹ is the polyether chains, the polyether chains is polyethylene glycol, monomer according to any one of claims 44 46. 48. The formula (II), wherein the total number (m + n) of the number of atoms (n) of L ^{1 and} the number of atoms (m) of L ² is in the range of 0 to 30. The monomer described in 1. 49. The monomer according to any one of claims 44 to 48, comprising a labeling substance. 50. A monomer according to any one of claims 44 to 49 comprising a stable isotope. 51. A monomer according to any one of claims 44 to 50 for use in automated nucleic acid synthesis. A method for producing a nucleic acid molecule, comprising:
The manufacturing method characterized by using the monomer as described in any one of Claim 44 to 51. 53. The production method according to claim 52, wherein the nucleic acid molecule is a single-stranded nucleic acid molecule according to any one of claims 1 to 32.

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