JP2006000121A - Recombinant dna virus vector for infection of animal cell - Google Patents

Abstract

<P>PROBLEM TO BE SOLVED: To provide a recombinant adenovirus vector system in which a foreign gene introduced into animal cells by the adenovirus vector can be transformed into an autonomously replicable form in the cells. <P>SOLUTION: Disclosed is a method for producing a recombinant adenovirus vector for infection of animal cell comprising a process in which a cell expressing adenovirus E1A gene is infected with a promoter, a recombinase gene and a recombinant adenovirus vector with a polyA sequence and is proliferated. <P>COPYRIGHT: (C)2006,JPO&NCIPI

Description

  The present invention relates to a recombinant DNA viral vector for animal cell infection. More specifically, the present invention relates to a recombinant DNA viral vector containing a recombinase gene or a DNA sequence encoding the recombinase recognition sequence, and a method for introducing a foreign gene into the cell using the vector and its use in gene therapy.

In the past, retroviruses have been often used as viral vectors for gene transfer, but this virus can be introduced only into dividing cells and integrated into the host cell chromosomes, making it particularly safe for gene therapy. There is a problem from the viewpoint of safety and its application range is considered to be limited.
Adenovirus vectors have the advantage of showing nearly 100% introduction efficiency in various animal cultured cells, not having a mechanism of positive chromosome integration unlike retroviruses, and being able to introduce genes even in resting cells. The application range as a vector for exogenous gene transfer experiments is extremely wide, and it is thought that it will be established as one of the main technologies of gene therapy in the near future.

  The use of adenovirus vectors is rapidly spreading as one of gene therapy techniques and in terms of expression studies in highly differentiated cells such as the nervous system. As a gene therapy technique, research has been energetically promoted as a so-called in vivo gene therapy method that directly compensates for a deficient gene in living cells that have a function by directly administering it to an already constructed and functioning tissue. ing. As for cystic fibrosis, five groups in the United States have already received experimental treatment for patients, and they are actively researching for muscular dystrophy, familial hypercholesterolemia, brain tumors, etc. . On the other hand, adenoviral vectors can also introduce genes into resting cells, and primary cultures and experiments on gene introduction into individual animals have attracted attention as methods for introducing genes into differentiated cells, particularly the nervous system. Based on the above, adenovirus vectors can be used not only for gene therapy introduction into many differentiated and undifferentiated cells including the nervous system, but also for gene expression by direct injection / administration to individual animals. The application of is expected.

However, unlike retroviruses, adenoviruses do not have an active mechanism of chromosomal integration, so expression is transient. The period is from 1 to 2 weeks and at most about 2 months. Therefore, when it is necessary to continue the therapeutic effect, it is necessary to continue the expression by repeated administration. However, repeated administration is a concern for the reduction of therapeutic effects due to the appearance of antibodies.
Accordingly, an object of the present invention is to construct a recombinant adenoviral vector system in which a foreign gene introduced into an animal cell by an adenoviral vector can be converted into a form capable of autonomous replication in the cell. Furthermore, it is to provide such a system for gene therapy.

  Therefore, the present inventors diligently studied to solve the above problems, and as a DNA virus vector for animal cell infection, a gene expression unit containing a foreign gene introduced into a cell using an adenovirus vector, A recombinase and its recognition sequence can be used to form a circular molecule, and by providing a replication origin, gene expression units containing foreign genes introduced into cells using an adenovirus vector can replicate autonomously. Successfully converted to form.

That is, the gist of the present invention is as follows.
(1) A method for producing a recombinant adenoviral vector for animal cell infection, comprising a step of infecting and proliferating a cell that expresses an adenovirus E1A gene with a recombinant adenoviral vector having a promoter, a recombinase gene and a polyA sequence. ,
About.

Here, recombinase is a specific DNA recombination enzyme that recognizes a specific DNA sequence consisting of several tens of bases, and performs all steps of DNA cutting, strand exchange and binding between these sequences. Therefore, when a recombinant adenoviral vector expressing this enzyme and a recombinant adenoviral vector having two copies of this recognition sequence in the same direction are prepared and co-infected with both cells, the recognized recombinase recognizes the two Reorganization between sequences occurs, and the sandwiched portion is cut out as a cyclic molecule. Therefore, if an expression unit and an origin of replication are incorporated in this part, the circular molecule is replicated in the nucleus, permanently maintained in the cell, and can continue to express foreign genes. Therefore, if such a recombinant adenoviral vector system is used for gene therapy, a long-term therapeutic effect can be sustained by a single administration.
The present invention has been completed by further research based on this knowledge.

The present invention is described in detail below.
The DNA virus vector for animal cell infection in the present invention can be used without particular limitation as long as it is a vector derived from a DNA virus that can exist only outside the chromosome after infection in the cell, such as adenovirus. it can. For example, an adenovirus vector, a vaccinia virus vector, a papopavirus vector, etc. are mentioned. Hereinafter, the present invention will be described using an adenovirus vector as a suitable example of a DNA virus vector for animal cell infection having a recombinase gene or a recombinase recognition sequence.

  The adenovirus used in the present invention has an animal as a natural host, and a human adenovirus having a human as a host is particularly preferably used. The genome of a human adenovirus is a double-stranded linear DNA of about 36 kbp, which has an inverted repeat base sequence consisting of approximately 100 bp at both ends of the DNA strand, and an E2B gene product at the 5 ′ end of both ends of the DNA strand. It has a unique structure in which the cut 55k protein is covalently bonded.

The genome of the adenovirus used in the present invention lacks the E1 region, particularly the E1A region. This is because the adenovirus is detoxified by deleting the E1A region involved in the cell canceration activity of adenovirus, and only foreign gene sequences integrated into the genome are expressed. It is not necessary to delete all of the E1A region, and the object can be achieved by removing the E1A region, particularly 1.3 to 9.3% of the fragment.
The adenovirus genome used in the present invention may also have the E3 region deleted. In particular, those obtained by deleting 79.6-84.8% of the E3 region are preferable. This is because it is unnecessary for adenovirus replication.
Therefore, it has the feature that it cannot grow in host cells except for human embryonic kidney-derived cell lines (293 cells) that continuously express E1A and E1B genes.

Recombinant adenovirus vector particles used in the present invention grow to a high titer of 10 ⁸ to 10 ⁹ pfu (plaque-forming unit) / ml as in the wild type strain when inoculated into the above-mentioned 293 cells. However, when inoculated into other cells or animal tissues, the virus particles invade the cells at a high rate and the virus genome is injected into the nucleus, but the E1A gene is deleted. All other adenoviral promoters that are transcriptionally activated cannot work. On the other hand, the foreign gene integrated into the adenovirus genome can be transcribed and expressed from the foreign promoter integrated into the genome. Therefore, if the recombinant adenovirus particle used in the present invention is used, foreign genes can be expressed in a wide range of animal cells while minimizing the influence of the adenovirus genome as a vector.

  Although the wild-type human adenovirus can proliferate after infection is limited to human cells, the cell types and tissues that can be expressed by the recombinant adenovirus used in the present invention are far wider. . This is because even in cells where the original adenovirus cannot grow, the recombinant adenovirus used in the present invention can sufficiently function as an expression vector as long as the virus particles can infect and enter.

However, since the recombinant adenovirus genome used in the present invention does not replicate in an extrachromosomal state, it exists in the nucleus for 2 weeks to 2 months, but when long-term expression of the target gene is required. Need to be administered multiple times, and adverse effects such as the appearance of antibodies are expected.
Therefore, in the present invention, a novel recombinant adenovirus incorporating the recombinase gene described later as such a recombinant adenovirus foreign gene was prepared, and on the other hand, sandwiched between two base sequences (recognition sequences) serving as substrates for this recombinase. Another new recombinant adenovirus incorporating the desired foreign gene was prepared, both were infected with animal cells, and the other recombinant adenovirus was cleaved by the action of the recombinase generated by the expression of the recombinase gene. The other recombinant adenovirus is constructed so that the portion becomes a circular molecule and can autonomously replicate in the cell.

  Examples of promoters used in the present invention include animal virus gene promoters and animal cell gene promoters. Examples of the former include SV40 gene promoter, adenovirus major late gene promoter, and the like. Examples of the latter include thymidine kinase gene promoter, metallothionein gene promoter, immunoglobulin gene promoter, and the like. However, the CAG promoter is particularly advantageously used in the present invention. This promoter is a hybrid promoter comprising a cytomegalovirus enhancer, a chicken β-actin promoter, a rabbit β globin splicing acceptor and a poly β sequence derived from rabbit β globin. It is disclosed. The preparation is carried out by cutting out with the restriction enzymes SalI and HindIII from pCAGGS described in the publication (JP-A-3-16887, page 13, line 20 to page 20, line 14 and page 22, line 1 to page 25, line 6). Can be used in the present invention.

  The recombinase used in the present invention is a specific DNA recombination enzyme that recognizes a specific base sequence and performs all steps of DNA cleavage, strand exchange and binding between the sequences. Such enzymes include those encoded by E. coli bacteriophage P1 (recombinase Cre). This is based on the loxP (Abremski et al., J. Biol. Chem. 1984, 159-1514; and Hoess et al., P.N.A.S., 1984, 81, 1026-1029) sequences within bacteriophage P1. That is, the loxP sequence is a recognition sequence for recombinase Cre. Other recombinases include recombinases encoded by the FLP gene derived from the yeast 2μ plasmid (James R. Broarch et al., Cell, 29, 227-234). Furthermore, the thing derived from the pSR1 plasmid of Tigosaccharomyces louii can also be used. This is encoded by the R gene (Matsuzaki et al., Molecular and Cellular Biology, 8, 955-962 (1988)). Among these, the recombinase of bacteriophage P1 is particularly suitable for the present invention.

  In the case of the recombinase gene, for example, in the case of the recombinase Cre gene, the portion encoding the recombinase gene of the DNA of bacteriophage P1 can be amplified using the polymerase chain reaction (PCR) method and used in the present invention. Other recombinase genes can be similarly prepared using the PCR method. The primer used in this case is selected so that the entire sequence of the recombinase gene is covered, and for the convenience of construction of the recombinant adenovirus vector, an appropriate restriction enzyme cleavage sequence is added to the outside of each primer. Is preferably used.

  The recombinase recognition sequence (substrate sequence) is several tens of bp, for example, the loxP sequence is 34 bp, and the base sequences are all known (Abremski et al., J. Biol. Chem. 1984, 1509). -1514; and Hoess et al., PNAS, 1984, 81, 1026-1029), can be chemically synthesized by conventional methods and used in the present invention.

  The poly A sequence used in the present invention is not particularly limited, but those derived from rabbit β globin are particularly preferred.

  In the present invention, when the recombinase gene is incorporated into an adenovirus vector, it is preferable to incorporate a nuclear translocation signal sequence at the same time. This is because the recombinase expressed in the nucleus of the infected cell by the adenovirus vector is secreted outside the nucleus, so that the recombinase needs to move into the nucleus again in order to act on the adenovirus vector having the recognition sequence. Yes, because the nuclear translocation signal sequence facilitates this (Daniel Kalderon et al., Cell. 39, 499-509 (1984)).

Examples of the replication origin that works in animal cells used in the present invention include those derived from viruses and those derived from animal cells. For example, the origin of replication includes a papovavirus, herpesvirus, adenovirus, poxvirus or parvovirus-derived replication origin. Examples of papovavirus-derived products include SV40-derived replication origins.
These replication origins are incorporated into the recombinant adenovirus vector of the present invention so that the circular molecule excised by the recombinase can autonomously replicate in the cell.

  The foreign gene used in the present invention is not particularly limited as long as it is a gene that can be expressed by the above-mentioned hybrid promoter (CAG promoter) or other promoters. Normal gene sequence corresponding to the defective gene (for example, adenosine deaminase, dystrophin, low density lipoprotein receptor, α-1 antitrypsin, blood coagulation factor 8, blood coagulation factor 9, galactosidase α or β), cytokines ( For example, interleukin-1-12, interferon-α, β or γ, tumor necrosis factor-α or β, granulocyte colony stimulating factor, granulocyte macrophage colony stimulating factor, erythropoietin, growth hormone, insulin, insulin-like growth hormone), Nerve Nutritional factors, non-self antigen genes (eg, allo HLA (HLA-B7)), nucleotide sequences encoding viral antigens, etc., tumor suppressor genes (eg, p53, RB, WT-1, NM23, NF-1), cancer Examples include antisense sequences such as Ras, which are genes, or suicide genes such as thymidine kinase and cytosine deaminase.

Usually, the origin of replication, promoter, foreign gene and poly A sequence incorporated into the recombinant adenoviral vector of the present invention are located between two recombinase recognition sequences and oriented in this order from the upstream.
However, the foreign gene, poly A sequence, origin of replication and promoter may be oriented in this order from upstream. This is because if it becomes a cyclic molecule, it will be identical to the above sequence.

When the present invention is used for gene therapy, the recombinant adenoviral vector of the present invention capable of expressing recombinase and a book having an origin of replication, promoter, foreign gene and poly A sequence that works in animals between two recombinase recognition sequences This is done by co-infection with the inventive recombinant adenoviral vector. Infection may be carried out at the same time, or one of them may be infected first. This is because DNA injected into animal cells by infection exists stably for more than one month.
The recombinant adenoviral vector of the present invention capable of expressing recombinase continues to be expressed in the cell for a certain period of time, and recombinase is produced. This recombinase acts on the other co-infected recombinant adenoviral vector, that is, the recombinant adenoviral vector of the present invention having two recombinase recognition sequences, and cuts out the portion sandwiched between the two recombinase recognition sequences. Molecularize. Since this cyclic molecule incorporates a replication origin that works in animal cells, it replicates autonomously in the cells. Accordingly, the therapeutic effect can be maintained almost permanently by one co-infection. Thus, it is considered that the recombinant adenovirus of the present invention is extremely useful for gene therapy.
Examples of such animal cells include a wide range of cells ranging from highly differentiated nervous system, muscle system, hepatocytes to undifferentiated epithelial cells and fibroblasts of humans or mammals.

Next, a method for producing the recombinant adenovirus of the present invention will be described.
(1) First, a method for producing a recombinant adenovirus vector having a promoter, a recombinase gene, and a poly A sequence will be described.
The production of the recombinant adenoviral vector of the present invention is generally very difficult because the protein is covalently bound to both ends of the viral genome as described above.
Therefore, in the present invention, the following method is used. The case where the recombinase Cre gene is used as the recombinase gene will be described, but the same applies to other recombinase genes.

(I) Recombinase Cre gene prepared by PCR and plasmid pUC19 (Takara Shuzo) were digested with restriction enzymes PstI (Takara Shuzo) and XbaI (Takara Shuzo), respectively, mixed and ligated to incorporate the recombinase Cre gene. Plasmid pUCCre is obtained.
(Ii) A cassette cosmid pAdex1CAwt containing a CAG promoter prepared by the method described in Cell Engineering, 13, 760-763 (1994) was treated with a restriction enzyme SwaI (Boehringer), and pUCCre was a restriction enzyme PstI (Takara Shuzo). ) And XbaI (manufactured by Takara Shuzo), and then mixed with Klenow enzyme (manufactured by Takara Shuzo) and smoothed at both ends. Next, the cassette cosmid is precipitated and ligated with T4 DNA ligase to obtain a cassette cosmid incorporating the recombinase Cre gene.

When using a promoter other than the CAG promoter, first, the E3 region (1.9 kb) and the E1A / E1B region (2.9 kb) unnecessary for replication were deleted from the full length of the adenovirus genome (36 kb). A cassette cosmid having a genomic DNA of about 31 kb was prepared. On the other hand, a plasmid containing a promoter to be used, a recombinase Cre gene, and a poly A sequence was prepared and treated with an appropriate restriction enzyme, and E1A / E1B of the adenovirus genome was prepared. A cassette cosmid incorporating a recombinase Cre gene expression unit at the deletion site is obtained.
(Iii) Next, the cassette cosmid obtained is subjected to in vitro packaging using Gigapack XL (Stratagene), which is a lambda in vitro packaging kit.

(Iv) Meanwhile, an adenovirus DNA-protein complex (Ad5dlX DNA-TPC) is prepared. As adenovirus DNA, Ad5dlX (I. Saito et al., J. Virology, vol.54, 711-719 (1985)) is used, and Ad5dlX is infected to HeLa cells (for 10 Roux) and cultured. . Viral particles are collected, and DNA-TPC is separated and collected by treatment with guanidine hydrochloride and ultracentrifugation.
The Ad5dlX DNA-TPC thus obtained is treated with a sufficient amount of EcoT22I for the production of the next step of recombinant adenovirus.

  (V) As the last step, a cassette cosmid incorporating the recombinase Cre gene and Ad5dlX DNA-TPC treated with EcoT22I are mixed, and transfection is performed by the calcium phosphate method using a Celfect (Pharmacia) kit. A virus solution is collected from a cell that has been killed due to virus growth to obtain a recombinant adenovirus vector having a promoter, a recombinase gene, and a poly A sequence.

(2) Next, a method for producing a recombinant adenoviral vector having two recombinase recognition sequences and a replication origin, promoter, foreign gene and poly A sequence that act in animal cells between them will be described. For convenience, the case where the above-mentioned CAG promoter is used as the promoter and polyA sequence and the SV40 replication origin is used as the replication origin will be described.

(A) First, a cassette cosmid that expresses a target foreign gene is prepared.
(I) pCAWG obtained by inserting a SwaI linker into the cloning site of plasmid pCAGGS (Niwa et al., Gene, 108, 193-200 (1990)) containing the CAG promoter is cleaved with SwaI and treated with alkaline phosphatase. . Next, the target foreign gene and pCAWG are mixed, treated with ligase, E. coli DHI strain (ATCC33849) is transformed, and a plasmid in which the foreign gene is inserted in a direction that allows expression under the control of the CAG promoter is obtained.

  (Ii) Next, a DNA fragment comprising an exogenous gene expression unit (in which the exogenous gene is inserted in such a direction that it can be expressed under the control of the CAG promoter) and the SV40 replication origin is prepared. The plasmid obtained in (i) is simultaneously digested with restriction enzymes SapI and SalI, and both ends are smoothed with Klenow enzyme, and the target DNA fragment is obtained by electrophoresis. This is mixed with pUC18 (manufactured by Takara Shuzo) that has been cleaved with the restriction enzyme SmaI and then treated with alkaline phosphatase, and treated with ligase to obtain a plasmid incorporating the foreign gene expression unit and the SV40 replication origin.

(Iii) Next, the following operation is performed to add the loxP sequence to both ends of the DNA fragment containing the expression unit and the SV40 replication origin. Synthetic DNA containing a loxP sequence designed to cleave pUC119 (Takara Shuzo) with restriction enzyme Ecl136II, treat with alkaline phosphatase, and then have an MluI site and an XhoI site at the ends, which when coupled together yield an NruI site A ligase reaction with the fragment (SEQ ID NO: 3) is performed to obtain a plasmid into which two synthetic DNA fragments are inserted.
This plasmid was cleaved with the restriction enzyme NruI and treated with alkaline phosphatase, and then the plasmid obtained in (ii) was co-digested with the restriction enzymes SalI and Ecl136II and blunted and ligated with the ligase. Thus, a plasmid containing a fragment having a loxP site at both ends of the DNA fragment containing the foreign gene expression unit and the SV40 origin of replication is obtained.

  (Iv) Next, the following operation is performed to obtain a recombinant cosmid containing a foreign gene expression unit and a fragment having a loxP site at both ends of the DNA fragment containing the SV40 replication origin. First, the plasmid obtained in (iii) was co-digested with restriction enzymes SmaI and EcoRI, both ends were blunted with Klenow enzyme, purified by electrophoresis, and the DNA fragment containing the foreign gene expression unit and the SV40 replication origin was cloned. A fragment having a loxP site at both ends is prepared. On the other hand, a product obtained by cleaving pAdex1cw (cell engineering, 13, 760-763 (1994)) with a restriction enzyme SwaI is prepared. Both of these are mixed, a cassette cosmid is precipitated, and bound with T4 DNA ligase to obtain a cassette cosmid in which a fragment having a loxP site is incorporated at both ends of the DNA fragment containing the foreign gene expression unit and the SV40 replication origin.

(B) Production of a recombinant adenoviral vector incorporating two loxP sequences and a fragment having a replication origin, a CAG promoter, and a foreign gene between them. Further, the same operations as in (iii) to (v) of (1) above are performed. By carrying out the process, the recombinant adenovirus vector of the present invention having the SV40 replication origin, the target foreign gene expression unit and the loxP sequences at both ends thereof can be prepared.

The recombinant adenoviral vector of the present invention having the promoter, recombinase gene and polyA sequence obtained as described above by the method of the present invention and the replication origin of SV40, the target foreign gene expression unit and the loxP sequence at both ends thereof The high-titer virus solution of the recombinant adenovirus vector of the present invention that has been appropriately diluted can be locally infused (central nervous system, portal vein, etc.), orally (using enteric solvent), airway administration, transdermal administration, etc. Can be used for the treatment of various diseases including genetic diseases.
Specific examples of preferred embodiments of the present invention include:
[1] A recombinant DNA virus vector for animal cell infection having a promoter, a recombinase gene and a poly A sequence,
[2] The recombinant DNA virus vector according to [1], wherein the DNA virus vector is an adenovirus vector,
[3] The DNA virus vector according to [2], wherein the recombinase gene is a gene for recombinase Cre derived from E. coli P1 phage,
[4] a recombinant DNA virus vector for infection of animal cells having two recombinase recognition sequences and an origin of replication, promoter, foreign gene and poly A sequence between them that act in animal cells,
[5] The recombinant DNA virus vector according to [4], wherein the DNA virus vector is an adenovirus vector,
[6] The recombinant DNA virus vector according to the above [5], wherein an origin of replication, a promoter, a foreign gene, and a poly A sequence working in animal cells are oriented in this order from the upstream,
[7] The recombinant DNA virus vector according to [5] above, wherein the foreign gene, poly A sequence, replication origin working in animal cells and promoter are oriented in this order from upstream,
[8] The recombinant DNA viral vector according to any one of [4] to [7] above, wherein the recombinase recognition sequence is a loxP DNA sequence that serves as a substrate for recombinase Cre,
[9] The recombinant DNA viral vector according to any one of [4] to [8] above, wherein the origin of replication working in animal cells is derived from a virus or derived from animal cells,
[10] The recombinant DNA viral vector according to the above [9], wherein the origin of replication working in animal cells is selected from the group consisting of papovavirus, herpesvirus, adenovirus, poxvirus, and parvovirus.
[11] The above [1] to [10], wherein the promoter and poly A are a hybrid promoter (CAG promoter) comprising a cytomegalovirus enhancer, a chicken β-actin promoter, a rabbit β globin splicing acceptor, and a poly A sequence. A recombinant DNA viral vector according to any one of
[12] A recombinant DNA viral vector for animal cell infection having a promoter, a recombinase gene and a poly A sequence, and two recombinase recognition sequences and an origin of replication, promoter, foreign gene and poly A sequence between them Infecting animal cells with recombinant DNA viral vectors for animal cell infection, excision of replication origin, promoter, foreign gene and poly A sequence working in animal cells existing between two recombinase recognition sequences as a circular molecule, autonomous in the cell Intracellular introduction of foreign genes by replication,
[13] The method for introducing a foreign gene into a cell according to [12] above, wherein the DNA virus vector is an adenovirus vector, and [14] the cell introduction as described in [12] or [13] above during gene therapy A method for introducing a human gene into a cell, characterized by
Is mentioned.

EXAMPLES Hereinafter, although an Example and a reference example demonstrate this invention further in detail, this invention is not limited at all by these Examples.
Unless otherwise specified, various procedures for handling phages, plasmids, DNA, various enzymes, Escherichia coli, cultured cells, etc. in the Examples are described in “Molecular Cloning, A Laboratory Manual, edited by T. Maniatis et al., Second Edition (1989). ), Cold Spring Harbor Laboratory ". DNA restriction enzymes and modification enzymes were purchased from Takara Shuzo, New England Biolabs (NEB), Stratagene, or Boehringer, and used according to the manufacturer's instructions.

Example 1
<Preparation of recombinant adenovirus vector having recombinase Cre gene and CAG promoter>
(1) Preparation of cassette cosmid for expression of recombinase Cre gene (i) Escherichia coli phage P1 DNA (ATCC11303-B23) containing recombinase Cre gene as a template and 5′-primer as an oligonucleotide of the following (SEQ ID NO: 1), Using the oligonucleotide of the following (SEQ ID NO: 2) as a 3′-primer and Vent ^R manufactured by NEB as a heat-resistant polymerase, PCR reaction was performed under the following conditions, and the product was subjected to agarose gel electrophoresis. A 1 kb band was cut out to obtain an approximately 1 kb DNA fragment containing the recombinase Cre gene.
5'-CGT CTGCAG TGCA TCATGA GTAATTTACTGACCGTACACCAAAATTTGCCTGC-3 '
PstI BspHI
3'-GACCTTCTACCGCTAATCGGTAAT TCGCGAGATCT CGG-5 '
Aor51HI; XbaI
(The underlined portion is a restriction enzyme recognition site.)

PCR reaction conditions Buffer: 10 mM KCl, 20 mM Tris-HCl (pH 8.8), 10 mM (NH 4) 2 SO 4, 2 mM MgSO 4, 0.1% Triton X-100 (buffer supplied with NEB) use)
Thermostable polymerase: 2 units dNTP: 400 μM
Primer: 1 μM
P1 phage DNA: 1 ng
Double-strand dissociation temperature: 1.5 minutes Annealing temperature: 1.5 minutes Extension reaction temperature: 2.0 minutes Reaction cycle: 20 times

  This fragment and pUC19 (Takara Shuzo) were simultaneously digested with restriction enzymes PstI (Takara Shuzo) and XbaI (Takara Shuzo), respectively, recovered, mixed to a molar ratio of about 3: 1, and T4 DNA ligase ( The ligation reaction was performed using Takara Shuzo. Further, E. coli strain JM109 (ATCC 53323) was transformed with this reaction mixture. A transformant was picked up from an LB agar plate supplemented with ampicillin (100 μg / ml) to obtain a plasmid pUCCre containing the recombinase Cre gene.

Next, 1 μg of the cassette cosmid pAdex1CAwt containing the CAG promoter prepared by the method described in Cell Engineering, 13, 760-763 (1994), cleaved with SwaI, and pUCCre were simultaneously digested with PstI and XbaI, and the Klenow enzyme 0.1 μg of a fragment of about 1 kb obtained by smoothing both ends by Takara Shuzo was mixed.
Here, the CAG promoter is disclosed in JP-A-3-16887 as a high expression vector, and the preparation thereof is pCAGGS (JP-A-3-16887, page 13 20) described in the same publication. Line to page 20, line 14 and page 22, line 1 to page 25, line 6) by cutting with restriction enzymes SalI and HindIII, and can be used in the present invention.

(Ii) Next, ethanol was added to the mixed solution to precipitate a cosmid. The precipitate was obtained by centrifugation and dissolved in a 5-fold dilution of a solution (TE) in which 1 mM EDTA was added to 10 mM Tris-hydrochloric acid (pH 7.5).
(Iii) ATP and T4 DNA ligase was added to the obtained cosmid in a ligase reaction buffer and allowed to bind overnight in a final volume of 7 μl. Subsequently, sterilized water and SwaI reaction buffer were added to make 48 μl, and then the ligase was heat-inactivated at 70 ° C. for 10 minutes.
At this time, unlike the plasmid, the cosmid efficiently packages macromolecules bonded to a linear tandem rather than a ring.

(Iv) 2 μl of SwaI (manufactured by Boehringer) was added and cut at 25 ° C. for 1 hour.
The meaning of cleaving SwaI is that when the cassette cosmid recombines without adding the expression unit, the Swal recognition sequence is regenerated, so in this step, the cosmid that does not incorporate the expression unit is recut to prevent colony formation. Because. This method is a powerful way to select only cassette cosmids with inserts.
(V) According to a conventional method (Molecular Cloning vol.3 E.34), the cassette cosmid was extracted with phenol, centrifuged, and then subjected to gel filtration.
(Vi) Swal cutting was performed again. That is, 5 μl of SwaI was added to the SwaI reaction buffer and cleaved at 25 ° C. for 2 hours. The reason is as described above.

(Vii) 1 μl of the obtained cosmid was subjected to in vitro packaging.
That is, Gigaback XL (manufactured by Stratagene), which is a lambda in vitro packaging kit, was used at ¼ scale, and the rest was frozen at −80 ° C. Since GIGABACK XL has a low packaging efficiency for cosmids of 42 kb or less, it can be selected to some extent from cosmids that have grown with inserts. In this experiment, when 10 colonies were picked up, most of them contained inserts, and clones with the desired orientation (leftward) could be easily obtained.
The handling of the cosmid was carried out according to a conventional method (Izumi Saito et al., Experimental Medicine: 7: 183-187, 1989).

(Viii) The packaged cosmid was infected with DH1 (ATCC 33849).
That is, three Ap ⁺ (ampicillin-added) agar plates and 5 ml of Ap ⁺ LB (pool) were inoculated with 1/200, 1/20, 1/2, and the remaining total, respectively, and cultured overnight.
Pool miniprep DNA was extracted and prepared, and the ratio of the insert containing the whole enzyme was examined. The whole colony was collected with agar and cultured in 1.5 ml of Ap ⁺ LB overnight to prepare miniprep DNA.
(Ix) Next, the direction and structure of the expression unit were confirmed by restriction enzyme digestion.
A plasmid containing an expression unit but lacking most of adenovirus DNA was prepared using NruI and ligase, DNA was prepared, and final confirmation of cDNA cloning was performed.

(2) Preparation of adenovirus DNA-protein complex (Ad5 dlX DNA-TPC) (i) As adenovirus DNA, Ad5 dlX (I. Saito et al., J. Virology, vol.54, 711-719 ( 1985)) was used. Ad5 dlX was infected to HeLa cells (for 10 Roux) and cultured.
Specifically, the virus solution of Ad5-dlX (-10 ⁹ PFU / ml) was infected with 0.2 ml / Roux, and 3 days later, the detached cells were collected by centrifugation at 1500 rpm for 5 minutes. Most of the adenovirus particles are in the cell nucleus, not in the medium, which has the advantage that the virus can be purified from infected cells. (The following operations were performed non-aseptically.)

(Ii) The obtained cells are suspended in 20 ml of 10 mM Tris-HCl (pH 8.0), and the cells are crushed at 200 W for 2 minutes (30 seconds × 4) using a sealed sonicator, and the virus is intracellularly Released from.
In order to release the virus from the cell, 5 ml or less may be used for freezing and thawing, but a sonicator is convenient for a volume larger than that. However, be sure to use a sealed type (with a special cup). The normal throw type is dangerous even in a safety cabinet.

(Iii) After removing the precipitate from the obtained crushed material by centrifugation (10 krpm, 10 minutes), put 15 ml of cesium chloride solution (specific gravity 1.43) in the ultracentrifuge SW28 tube, and put the supernatant on it The layers were layered and concentrated by cushion centrifugation (25 krpm, 1 hour, 4 ° C.).
(Iv) The virus layer just below the interface was transferred to a SW50.1 tube. The virus layer directly under the interface was usually visible, and 5 ml of the virus layer and cesium chloride under the virus layer were collected. At the same time, the other was filled with a cesium chloride solution (specific gravity 1.34).
These were ultracentrifuged overnight at 35 krpm and 4 ° C. Next, the white virus band was separated and transferred to a tube with a gradient. Further, ultracentrifugation was performed at 35 krpm and 4 ° C. for 4 hours or more.

  (V) A white virus band was separated and mixed with an equal amount of 8M guanidine hydrochloride at room temperature, and 4M guanidine hydrochloride saturated cesium chloride was added to fill the VTi65 tube. The particle protein was denatured and dissociated by 4M guanidine hydrochloride, and DNA-TPC was released. Ethidium bromide was not available because a method for later removal was not established.

(Vi) The above tube was ultracentrifuged at 55 krpm and 15 ° C. overnight, fractionated by 0.2 ml, 1 μl of each was mixed with 20 μl of 1 μg / ml ethidium bromide aqueous solution, and the DNA was stained by fluorescence staining. The presence or absence was confirmed. A few fractions containing DNA were collected.
(Vii) Dialyzed overnight in 500 ml TE (twice) and stored at -80 ° C. The amount of Ad5dlX DNA-TPC thus obtained was calculated in the same manner as normal DNA from OD260.
(Viii) The obtained Ad5dlX DNA-TPC was cleaved with a sufficient amount of EcoT22I for 2 hours for preparation of the recombinant adenovirus in the third step, and then stored at -80 ° C.

DNA-TPC could be digested with restriction enzymes, dialyzed, and gel filtered, but could not be electrophoresed, treated with phenol, or precipitated with ethanol. Since the concentration method was only cesium chloride equilibrium centrifugation, it was kept as thick as possible. About 300 μg of DNA-TPC could be obtained from 10 Roux infected cells.
(Ix) A part was separated, 10 μl of BPB buffer for electrophoresis was added, 1 μl of proteinase K (10 mg / ml) was added, and the mixture was reacted at 37 ° C. for 10 minutes to digest the terminal protein. Phenol was extracted and the supernatant was separated by agarose gel electrophoresis to confirm complete cleavage.
The restriction enzyme buffer in EcoT22I-cleaved DNA-TPC was removed by centrifugal gel filtration, and then dispensed and stored at -80 ° C.

(3) Isolation of recombinant virus and preparation of high-titer virus solution (i) One 293 cell cultured in 10% FCS-added DME was prepared.
(Ii) 8 μg (preferably 3 to 9 μg) of pAdex1w DNA incorporating an expression unit and 1 μg of Ad5dlX DNA-TPC cleaved with EcoT22I were mixed, and a 6 cm Petri dish was prepared using a Cellfect (Pharmacia) kit. The plates were transfected by the calcium phosphate method. The mixed solution was dropped from above the medium of 6 cm petri dish and the culture was continued.
Incubate overnight (about 16 hours), change the culture medium in the morning, and in the evening, add 3% collagen-coated 96-wells (stock solution, 10-fold dilution, 100-fold dilution) to each well using 5% FCS-added DME. Re-rolled with 0.1 ml per unit. In order to prevent the number of cells from greatly differing between each plate, 293 cells of a 10 cm dish were mixed and spread on two dilutions.

(Iii) After 3-4 days and 8-10 days, 50 μl of 10% FCS-added DME was added to each well. When 293 cells became thin, it was added early.
Wells with virus growth and cell death appeared between 7 and 15 days. Each time the cells in the well were completely killed, the culture solution (every dead cells) was aseptically transferred to a sterilized 1.5 ml tube with a sterile Pasteur pipette, snap frozen with dry ice and stored at −80 ° C.
(Iv) The determination was completed in 15-18 days. Select about 10 culture tubes collected from wells where cells died relatively slowly, freeze and thaw 6 times, then centrifuge at 5 krpm for 10 minutes and store the supernatant at -80 ° C. as the first virus solution (first seed) did.
This is because a well in which virus propagation has occurred earlier is likely to be a mixed infection of a plurality of virus strains.

(V) Prepare 293 cells in a 24-well plate, and add 2% each of 5% FCS-DME (0.4 ml / well) and 10 μl of the primary virus solution.
(Vi) When the cells were completely killed in about 3 days, the supernatant was obtained by freezing and thawing and centrifuging 6 times in the same manner as in the preparation of the primary virus solution, and this was used as a secondary virus solution (second seed) − Stored at 80 ° C. The titer of the secondary virus solution was about 10 ⁷ to 10 ⁸ PFU / ml. The other 1-well dead cells were centrifuged at 5 krpm for 5 minutes, the supernatant was discarded, and only the cells were stored at −80 ° C. (cell pack). When cell packs of 10 virus strains were collected, the total DNA of infected cells was extracted by the following method. To the cell pack, 400 μl of TNE for cell DNA (50 mM Tris-HCl pH 7.5, 100 mM NaCl, 10 mM EDTA), 4 μl of proteinase K (10 mg / ml) and 4 μl of 10% SDS were added.

(Vii) After treatment at 50 ° C. for 1 hour, the nucleic acid obtained by phenol / chloroform extraction twice, chloroform extraction twice, and ethanol precipitation was dissolved in 50 μl of TE containing 20 μg / ml of RNase.
15 μl of the expression unit was cleaved with XhoI, an enzyme containing CG as a recognition sequence among the enzymes that cleave the expression unit, and the electrophoresis was performed overnight on an agarose gel with a length of about 15 cm along with XhoI cleavage of the expression cosmid cassette. The patterns were compared. A band in which a band from the break point in the expression unit to the left end of the adenovirus genome appeared correctly was selected. In addition, clones in which unexplainable bands appear thin were discarded because they could be mixed with viruses with deletions.
Since adenoviral DNA grows to 10,000 copies per cell, the total DNA can be extracted together with the cellular DNA, and the viral DNA band can be observed by restriction enzyme digestion. Enzymes containing CG in the recognition sequence, such as Xhol, do not cleave cellular DNA, so the pattern is easy to see. When using other enzymes, it was necessary to keep uninfected 293 cell DNA in control. (A band derived from a repetitive sequence of human cells appeared).

(Xiii) 0.1 ml of the secondary virus solution of the target virus strain identified by Xhol cleavage was infected with 293 cells in a collagen-coated 150 cm ² bottle (medium was 25 ml).
When the cells died after 3 days, 25 ml of the medium with dead cells was aseptically disrupted in a sealed sonicator 200w with a maximum output of 2 minutes (30 seconds × 4 times) to release the virus.
The precipitate was removed by centrifuging at 3 krpm and 4 ° C for 10 minutes, dispensed into 13 ml each of 2 ml in a 5 ml freezing tube, rapidly frozen with dry ice and stored at -80 ° C to prepare a tertiary virus solution. The tertiary virus solution was a solution containing the recombinant adenovirus of the present invention and had a high titer of about 10 ⁹ PFU / ml.
In addition, 5 μl of the tertiary virus solution was infected to one well of 293 cells in a 24-well plate, and the enzyme cleavage pattern of the grown viral DNA was confirmed by the above method. If it is suspected to be a deletion virus or a mixture with the parent virus, the deletion virus that had already been slightly mixed in the secondary virus solution stage may have appeared due to its rapid growth. All the tertiary seeds were discarded, and the target virus was purified from another primary virus solution by redoing again or by limiting dilution from the primary virus solution.

Reference Example <Simple titration method for recombinant adenovirus of the present invention>
The recombinant adenovirus of the present invention can be easily measured by the following method.
(I) Prepare one 293 cell for each 10 cm dish.
Recombinant recombinant adenovirus solution (tertiary virus solution) is serially diluted from 10 ^-1 to 10 ^-4 using DME supplemented with 5% FCS. For example, 0.9 ml DME + 0.1 ml virus solution. Change all the tips.
(Ii) 50 μl of 5% FCS-added DME is added to all wells of one 96-well collagen coat.
In the first row, 25 μl of recombinant virus diluted to 10 ⁻⁴ is added.
Transfer 25 μl to the second row of wells using an 8-well multichannel pipette. Thereafter, the same operation is repeated up to the 11th row, and the last 25 μl is discarded. As a result, 3 ⁿ serial dilution series can be prepared up to 3 ¹¹ × 10 ^-4 . The 12th row serves as a control for uninfected cells.
The chip used at this time is changed each time.

Example 2
<Production of a recombinant adenoviral vector having two loxP sequences and an SV40 replication origin, a CAG promoter, and a hepatitis B virus surface antigen (HBs) between them>
(1) Preparation of cassette cosmid for expression of hepatitis B surface antigen (HBs) (i) Plasmid pHBVadr4 (Fujiyama et. Al., Nucleic Acids Res., 11,4601-4610, 1983) containing HBs cDNA After simultaneous digestion with Psp1406I and XhoI, both ends were further blunted with Klenow enzyme, and a 710 bp fragment was recovered by agarose gel electrophoresis.

(Ii) The following operation was performed to obtain an expression unit for expressing HBscDNA under the control of the CAG promoter.
PCAWG obtained by inserting a SwaI linker into the cloning site of the plasmid pCAGGS (Niwa et. Al. Gene, Vol. 108, P193-200) containing the CAG promoter was cleaved with SwaI and treated with alkaline phosphatase. Next, this and the fragment obtained in I were mixed at a molar ratio of about 1: 3, T4 DNA ligase reaction was performed, and E. coli DHI strain (ATCC 33849) was transformed with the reaction mixture. A transformant was picked up from an LB agar plate added with ampicillin to obtain a plasmid pCAG · HBs into which a fragment was inserted in the direction in which HB cDNA was expressed under the control of the CAG promoter.

(Iii) In order to obtain a DNA fragment containing the HBs expression unit and the SV40 replication origin, the following operation was performed.
pCAG · HBs was co-digested with restriction enzymes SapI and SalI, and both ends were blunted with Klenow enzyme, and then a 3.6 kb fragment was recovered by agarose gel electrophoresis. PUC18 (manufactured by Takara Shuzo) that had been cleaved with the restriction enzyme SmaI and then treated with alkaline phosphatase was mixed with a 3.6 kb fragment at a molar ratio of about 1: 3 to carry out a ligation reaction to obtain the desired plasmid pUC18CAHBsS.

(Iv) Next, the following operation was performed to add loxP sites to both ends of the DNA fragment containing the HBs expression unit and the SV40 replication origin.
pUC119 (manufactured by Takara Shuzo) was cleaved with the restriction enzyme Ecl136II, treated with alkaline phosphatase, and then the MloI site and the XhoI site at the ends, which were combined with each other and contained a loxP sequence designed to generate an NruI site. A ligation reaction with a synthetic DNA fragment (SEQ ID NO: 3) was performed to obtain a plasmid pULL2r in which two of the synthetic DNA fragments were inserted.
5'-CGAACGCGTATAACTTCGTATAGCATACATTATACGAAGTTATCTCGAGTCG-3 '
3'-GCTTGCGCA TATTGAAGCATATCGTATGTAATATGCTTCAATA GAGCTCAGC-5 '
(The underlined sequence is the loxP site.)
PUC18CAHBsS obtained in (iii) above was co-digested with restriction enzymes SalI and Ecl136II, and both ends were blunted with Klenow enzyme, and then a 3.6 kb fragment was recovered by agarose gel electrophoresis. pULL2r was cleaved with the restriction enzyme NruI and treated with alkaline phosphatase, followed by ligation reaction with a 3.6 kb fragment to obtain the target plasmid pULCA · HBsS.

(V) In order to obtain a recombinant cosmid containing a fragment having a loxP site at both ends of a DNA fragment containing the HBs expression unit and the SV40 replication origin, the following both DNAs were prepared.
(A) 0.3 μg of a 3.7 kb fragment recovered by agarose gel electrophoresis after simultaneously digesting pULCA · HBsS with restriction enzymes SmaI and EcoRI and further smoothing both ends with Klenow enzyme.
(B) 1 μg of pAdexlcw (cell engineering, 13, 760-763, (1994)) cleaved with the restriction enzyme SwaI.
Both were mixed and the target recombinant cosmid was obtained by the same operation as (1) (ii) to (ix) of Example 1.
Further, by the same operation as in (2) to (3) of Example 1, the target set having two loxP sequences and an SV40 replication origin, a CAG promoter, and a hepatitis B virus surface antigen (HBs) between them. The replacement adenoviral vector AddexLCAHBsSL was obtained.

Example 3 (infection experiment)
COS-1 cells or CV-1 cells are cultured until they almost cover the bottom of the 6 cm dish.
Each of the adenoviral vectors obtained in Example 1 and Example 2 was adsorbed for 1 hour at moi = 5 according to the following protocol.
After 3 days, harvested and analyzed Southern.
That is, the recombinant adenovirus vector AdexLCAHBsSL has a HindIII cleavage site of about 6.0 kb, and becomes a 3.5 kb circular molecule when cleaved at the loxP site by recombinase Cre. Since this circular molecule has one HindIII cleavage site, the DNA harvested after infection was treated with HindIII, subjected to electrophoretic electrophoresis, and Southern blotting was performed. As a probe, an HBs fragment (710 bp) was used.
The result is shown in FIG.

  As is apparent from FIG. 1, 3.5 kb linear DNA generated by HindIII cleavage of the circular molecule was observed only when infected with the combination of adenoviral vectors obtained in Example 1 and Example 2 ( Lane 4 and lane 8). In addition, when the adenoviral vector obtained in Example 2 and the adenoviral vector not having the recombinase Cre gene were infected (lanes 3 and 7), a 3.5 kb band was not observed, and from AddexLCAHBsSL to HindIII Only the 6.0 kb band produced by cutting out is recognized.

Furthermore, the comparison of the concentration of the bands in lane 7 and lane 8 shows that the cyclic molecule was replicated about 40 times in COS-1 cells. On the other hand, since the concentrations of the bands in lane 3 and lane 4 are approximately the same, it can be seen that the cyclic molecule is not replicated in CV-1 cells. This is consistent with the fact that the SV40-derived origin of replication does not work in CV-1 cells.
The above results indicate that by infecting animal cells with the combination of adenovirus vectors of the present invention obtained in Example 1 and Example 2, the portion sandwiched between the two recombinase recognition sequences was excised in the cells. It clearly provides evidence that it forms a cyclic molecule and replicates autonomously in the cell.

In addition, it is convenient to perform the above infection experiment as follows.
When the serum of the medium is not FCS (for example, CS), the cultured cells are washed twice with serum-free medium and the medium is removed.
Viral solution (diluted with serum-free or FCS-added medium) is added to the extent that the cell surface does not dry out during the following procedure. It is 30-40 μl in 96 holes, 50-70 μl in 24 holes, 100-200 μl in 10 cm petri dish, but intentionally leaving a little medium before adding virus solution, adding virus solution, It is more practical to use capacity.
Shake the plate several times with a period of several seconds like a seesaw to spread the virus solution evenly over the cells. This operation is performed 3 times every 20 minutes. During this time, the cells are placed in a CO2 incubation.
After the third operation is completed (1 hour after infection), a normal amount of the culture solution is added and cultured as usual. The infection time is usually 1 hour, and at most 2 hours is sufficient.

  According to the present invention, it is possible to provide a recombinant DNA virus vector capable of introducing a foreign gene into an animal cell in a form capable of autonomous replication in a wide range of animal cells. The present invention also provides a simple method for producing this recombinant DNA virus vector. In particular, the recombinant adenoviral vector of the present invention is useful for the treatment of genetic diseases.

Sequence Listing SEQ ID NO: 1
Sequence length: 53
Sequence type: Nucleic acid Number of strands: Single strand Topology: Linear type of sequence: Other nucleic acids (any DNA, including some genomic DNA)
Hypothetical array: YES
Antisense: NO
Origin: E. coli phage P1 DNA
Sequence Features Method for determining features: S
Array
CGTCTGCAGT GCATCATGAG TAATTTACTG ACCGTACACC AAAATTTGCC TGC 53

SEQ ID NO: 2
Sequence length: 38
Sequence type: Nucleic acid Number of strands: Single strand Topology: Linear type of sequence: Other nucleic acids (any DNA, including some genomic DNA)
Hypothetical array: YES
Antisense: NO
Origin: E. coli phage P1 DNA
Sequence Features Method for determining features: S
Array
GGCTCTAGAG CGCTTAATGG CTAATCGCCA TCTTCCAG 38

SEQ ID NO: 3
Sequence length: 52
Sequence type: Nucleic acid Number of strands: Double-stranded Topology: Linear Sequence type: Other nucleic acids (any DNA, including some genomic DNA)
Hypothetical array: YES
Antisense: NO
Origin: E. coli phage P1 DNA
Sequence Features Method for determining features: S
Array
CGAACGCGTA TAACTTCGTA TAGCATACAT TATACGAAGT TATCTCGAGT CG 52

FIG. 1 shows DNA collected after infecting COS-1 cells or CV-1 cells using various combinations of recombinant adenovirus vectors, treated with HindIII, fractionated by electrophoresis, and Southern blotting. It is a figure which shows the result of having analyzed.

Explanation of symbols

Prepared in Example 1 with an adenovirus vector in which the E3, E1A, and E1B regions were deleted in the target section 2 CV-1 cells in which only the medium was added to the M marker 1 CV-1 cells and the foreign gene was not incorporated In a group 3 CV-1 cell infected with a recombinant adenovirus vector incorporating the recombinase Cre gene and the CAG promoter, the dex1LCAHBsSL (prepared in Example 2) and the E3, E1A, and E1B regions were deleted. A group in which dex1LCAHBsSL (prepared in Example 2) and the recombinase Cre gene prepared in Example 1 and the CAG promoter are incorporated into a group 4 CV-1 cell infected with an adenoviral vector not incorporating a foreign gene. Infected with the modified adenovirus vector 5 COS- The cells were treated in the same manner as 1 with 6 COS-1 cells, treated in the same manner as in 2 with 7 COS-1 cells, and treated with the same as in 3 with 8 COS-1 cells. Ku which performed processing similar to 4

Claims (3)

  A method for producing a recombinant adenoviral vector for infection of animal cells, comprising the step of infecting and proliferating a cell expressing the adenovirus E1A gene with a recombinant adenoviral vector having a promoter, a recombinase gene and a poly A sequence.   The production method according to claim 1, wherein the recombinase gene is a gene of recombinase Cre derived from E. coli P1 phage.   The production method according to claim 1 or 2, wherein the promoter and the poly A sequence are a hybrid promoter (CAG promoter) comprising a cytomegalovirus enhancer, a chicken β-actin promoter, a rabbit β globin splicing acceptor and a poly A sequence.

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