IL299070A - Variant pathogenicity scoring and classification and uses thereof - Google Patents
Variant pathogenicity scoring and classification and uses thereofInfo
- Publication number
- IL299070A IL299070A IL299070A IL29907022A IL299070A IL 299070 A IL299070 A IL 299070A IL 299070 A IL299070 A IL 299070A IL 29907022 A IL29907022 A IL 29907022A IL 299070 A IL299070 A IL 299070A
- Authority
- IL
- Israel
- Prior art keywords
- pathogenicity
- scoring
- sorting
- variants
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
-
- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06F—ELECTRIC DIGITAL DATA PROCESSING
- G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
- G06F16/20—Information retrieval; Database structures therefor; File system structures therefor of structured data, e.g. relational data
- G06F16/28—Databases characterised by their database models, e.g. relational or object models
- G06F16/284—Relational databases
- G06F16/285—Clustering or classification
-
- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
- G06N3/00—Computing arrangements based on biological models
- G06N3/02—Neural networks
-
- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
- G06N3/00—Computing arrangements based on biological models
- G06N3/02—Neural networks
- G06N3/04—Architecture, e.g. interconnection topology
- G06N3/044—Recurrent networks, e.g. Hopfield networks
-
- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
- G06N3/00—Computing arrangements based on biological models
- G06N3/02—Neural networks
- G06N3/04—Architecture, e.g. interconnection topology
- G06N3/0464—Convolutional networks [CNN, ConvNet]
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/20—Supervised data analysis
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
- Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation
Landscapes
- Engineering & Computer Science (AREA)
- Physics & Mathematics (AREA)
- Theoretical Computer Science (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Data Mining & Analysis (AREA)
- Databases & Information Systems (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Medical Informatics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Biotechnology (AREA)
- Artificial Intelligence (AREA)
- Evolutionary Biology (AREA)
- Evolutionary Computation (AREA)
- Software Systems (AREA)
- Bioinformatics & Computational Biology (AREA)
- Molecular Biology (AREA)
- General Physics & Mathematics (AREA)
- General Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- Computational Linguistics (AREA)
- Computing Systems (AREA)
- Mathematical Physics (AREA)
- Chemical & Material Sciences (AREA)
- Analytical Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Public Health (AREA)
- Bioethics (AREA)
- Computer Vision & Pattern Recognition (AREA)
- Epidemiology (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Medical Treatment And Welfare Office Work (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US202063055724P | 2020-07-23 | 2020-07-23 | |
| PCT/US2021/042599 WO2022020487A1 (en) | 2020-07-23 | 2021-07-21 | Variant pathogenicity scoring and classification and uses thereof |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| IL299070A true IL299070A (en) | 2023-02-01 |
Family
ID=77265352
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| IL299070A IL299070A (en) | 2020-07-23 | 2021-07-21 | Variant pathogenicity scoring and classification and uses thereof |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US20220027388A1 (https=) |
| EP (1) | EP4186061A1 (https=) |
| JP (1) | JP2023534616A (https=) |
| KR (1) | KR20230043072A (https=) |
| CN (1) | CN115715415A (https=) |
| AU (1) | AU2021313211A1 (https=) |
| CA (1) | CA3184399A1 (https=) |
| IL (1) | IL299070A (https=) |
| WO (1) | WO2022020487A1 (https=) |
Families Citing this family (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP4036798A1 (de) * | 2021-01-27 | 2022-08-03 | Siemens Healthcare GmbH | Computer-implementiertes verfahrens zur automatischen klassifikation von emitter-strukturen, vorrichtung zur durchführung des verfahrens, maschinenlesbarer programmcode und speichermedium |
| EP4612692A1 (en) * | 2022-11-01 | 2025-09-10 | Laboratory Corporation of America Holdings | Population frequency modeling for quantitative variant pathogenicity estimation |
| EP4732284A1 (en) | 2023-06-23 | 2026-04-29 | Illumina, Inc. | Method and system for estimating impact of mutations on fitness, lifespan, and fecundity |
Family Cites Families (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20200097835A1 (en) * | 2014-06-17 | 2020-03-26 | Ancestry.Com Dna, Llc | Device, system and method for assessing risk of variant-specific gene dysfunction |
| DE102016005947B3 (de) * | 2016-05-16 | 2017-06-08 | Dimo Dietrich | Verfahren zur Abschätzung der Prognose und zur Prädiktion des Ansprechens auf eine Immuntherapie von Patienten mit malignen Erkrankungen |
| CN110832596B (zh) * | 2017-10-16 | 2021-03-26 | 因美纳有限公司 | 基于深度学习的深度卷积神经网络训练方法 |
-
2021
- 2021-07-21 CN CN202180043774.0A patent/CN115715415A/zh active Pending
- 2021-07-21 AU AU2021313211A patent/AU2021313211A1/en not_active Abandoned
- 2021-07-21 WO PCT/US2021/042599 patent/WO2022020487A1/en not_active Ceased
- 2021-07-21 KR KR1020227045561A patent/KR20230043072A/ko active Pending
- 2021-07-21 JP JP2022578715A patent/JP2023534616A/ja active Pending
- 2021-07-21 EP EP21752461.0A patent/EP4186061A1/en not_active Withdrawn
- 2021-07-21 US US17/381,819 patent/US20220027388A1/en active Pending
- 2021-07-21 IL IL299070A patent/IL299070A/en unknown
- 2021-07-21 CA CA3184399A patent/CA3184399A1/en active Pending
Also Published As
| Publication number | Publication date |
|---|---|
| CN115715415A (zh) | 2023-02-24 |
| US20220027388A1 (en) | 2022-01-27 |
| WO2022020487A1 (en) | 2022-01-27 |
| JP2023534616A (ja) | 2023-08-10 |
| EP4186061A1 (en) | 2023-05-31 |
| CA3184399A1 (en) | 2022-01-27 |
| AU2021313211A1 (en) | 2022-12-01 |
| KR20230043072A (ko) | 2023-03-30 |
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