HRP20200524T1 - Postupak dijagnoze neurodegenerativnih bolesti - Google Patents

Postupak dijagnoze neurodegenerativnih bolesti Download PDF

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HRP20200524T1
HRP20200524T1 HRP20200524TT HRP20200524T HRP20200524T1 HR P20200524 T1 HRP20200524 T1 HR P20200524T1 HR P20200524T T HRP20200524T T HR P20200524TT HR P20200524 T HRP20200524 T HR P20200524T HR P20200524 T1 HRP20200524 T1 HR P20200524T1
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prion protein
shear force
conformation
aggregated
aggregated conformation
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HRP20200524TT
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Thorsten Lührs
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Senostic Health Gmbh
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    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • GPHYSICS
    • G01MEASURING; TESTING
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    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
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    • G01N33/483Physical analysis of biological material
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    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • GPHYSICS
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    • G01N2800/2828Prion diseases
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
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Claims (17)

1. Postupak analize prisutnosti prionskog proteina agregirane konformacije povezanog s bolešću u uzorku sisavca dobivenom biopsijom, obuhvaćajući korake a) dodavanja barem jednog prionskog proteina prirodne konformacije uzorku, b) podvrgavanje mješavine, koja sadrži uzorak i barem jedan prionski protein prirodne konformacije, dobivene u koraku a) barem jednom intenzitetu smične sile koji je kontroliran kako bi imao jednoličan intenzitet s rasponom intenziteta od najviše 20% vrijednosti smične sile za predodređen broj ciklusa u predodređenom vremenu aktivnosti smične sile i predodređenom vremenu mirovanja, c) nakon koraka b), određivanje sadržaja prionskog proteina agregirane konformacije za svaki od intenziteta smične sile, naznačen d) usporedbom sadržaja prionskog proteina agregirane konformacije, određenog u koraku c), s predodređenim podacima o sadržaju prionskog proteina agregirane konformacije, pri čemu je sadržaj određen za prionski protein prirodne konformacije podvrgnut istom intenzitetu smične sile kao i u koraku b), pri čemu su predodređeni podaci o sadržaju prionskog proteina agregirane konformacije određeni s obzirom na prionski protein prirodne konformacije u mješavini s referentnim uzorkom i navedeni podaci su predviđeni u bazi podataka koja, povezano s tim podacima, sadrži dijagnozu neurodegenerativne bolesti pacijenta od kojeg dolaze referentni uzorci.
2. Postupak prema zahtjevu 1, naznačen time da se prije koraka b) mješavina dijeli u alikvote i u koraku b) su barem dva alikvota podvrgnuta različitom intenzitetu smične sile svaki i u koraku c) je sadržaj prionskog proteina agregirane konformacije određen za svaki alikvot i u koraku d) se sadržaj prionskog proteina agregirane konformacije određen u koraku c) za svaki alikvot uspoređuje s podacima predodređenog sadržaja prionskog proteina agregirane konformacije.
3. Postupak prema zahtjevu 1 ili 2, naznačen time da se u koraku b) mješavina podvrgava slijedu od barem dva različita intenziteta smične sile i sadržaj prionskog proteina agregirane konformacije se određuje tijekom ili nakon podvrgavanja mješavine svakom od intenziteta smične sile.
4. Postupak prema jednom od prethodnih zahtjeva, naznačen time da se mješavini dodaje barem jedna luminiscentna boja, koja je specifična za prionski protein agregirane konformacije, prije koraka podvrgavanja mješavine barem dvama intenzitetima smične sile i mjerenje luminiscencije boje.
5. Postupak prema zahtjevu 4, naznačen ozračivanjem mješavine svjetlošću koja ima valnu duljinu za poticanje luminiscencije boje i mjerenjem luminiscencije boje tijekom aktivnosti smične sile iz koraka b) ili tijekom faze mirovanja iz koraka b), bez promjene volumena koji zauzima mješavina u odnosu na generator smične sile, koji proizvodi smičnu silu u koraku b).
6. Postupak prema jednom od prethodnih zahtjeva, naznačen ozračivanjem mješavine svjetlošću koja ima valnu duljinu koja je raspršena od strane prionskog proteina agregirane konformacije i mjerenjem raspršenog svjetla koje isijava iz smjese tijekom koraka b), ili tijekom mirovanja od koraka b), sa ili bez promjene volumena koji zauzima mješavina u odnosu na generator smične sile, koji proizvodi smičnu silu u koraku b).
7. Postupak prema jednom od prethodnih zahtjeva, naznačen time da je u koraku b) brzina formiranja prionskog proteina agregirane konformacije određena iz sadržaja prionskog proteina agregiranog stanja utvrđenog kod barem jednog intenziteta smične sile i predodređeni podaci obuhvaćaju brzinu formiranja kod istog intenziteta smične sile.
8. Postupak prema jednom od prethodnih zahtjeva, naznačen time da se sadržaj prionskog proteina agregirane konformacije određuje kao sadržaj koji nastaje kroz vrijeme i brzina stvaranja prionskog proteina agregirane konformacije je određena nelinearnom regresijskom analizom aproksimacije određenog sadržaja prionskog proteina agregirane konformacije koji nastaje kroz vrijeme za svaki intenzitet smične sile.
9. Postupak prema jednom od prethodnih zahtjeva, naznačen dodavanjem barem jednog prionskog proteina agregirane konformacije barem jednom alikvotu mješavine, koja obuhvaća uzorak i barem jedan prionski protein prirodne konformacije, pri čemu se barem jedan prionski protein agregirane konformacije stvara podvrgavanjem prionskog proteina prirodne konformacije jednoličnoj smičnoj sili upravljanoj do raspona intenziteta od najviše 1% jednog intenziteta smične sile.
10. Postupak prema jednom od prethodnih zahtjeva, naznačen time da se istovremeno tretira barem jedan prionski protein prirodne konformacije bez dodavanja uzorka tjelesne tekućine.
11. Korištenje uređaja u postupku prema jednom od prethodnih zahtjeva, pri čemu uređaj obuhvaća generator smične sile, kojim se upravlja kako bi se postigla smična sila od najviše 10% intenziteta smične sile na svaki element volumena mješavine uzorka biopsije tjelesne tekućine ili tkiva i prionskog proteina prirodne konformacije, koja je smještena u spremniku (8), naznačeno izvorom svjetlosti (17), čiji je svjetlosni tok (19) usmjeren na spremnik (8) i koji obuhvaća optički detektor (14), koji je smješten na putu svjetlosnog toka (11) svjetla koje izlazi iz spremnika (8), pri čemu je optički detektor (14) detektor luminiscencije, detektor raspršivanja svjetlosti ili detektor apsorpcije.
12. Korištenje uređaja prema zahtjevu 11, naznačeno time da je detektor (14) povezan s računalom koje je namješteno da svjetlost (11), koja izlazi iz spremnika (8), određuje kao mjeru za sadržaj prionskog proteina agregirane konformacije, pri čemu računalo ima pristup bazi podataka (baza podataka referentnih informacija), koja sadrži predodređene vrijednosti za sadržaj prionskog proteina agregirane konformacije u odnosu na specifične intenzitete smične sile i u odnosu na dijagnozu neurodegenerativne bolesti, koja se odnosi na referentni uzorak, koji je bio korišten za stvaranje predodređenih vrijednosti.
13. Korištenje uređaja prema jednom od zahtjeva 11 do 12, koji obuhvaća barem dva spremnika (8), koji su svaki smješteni u otvoru kućišta (12), koje sadrži optički detektor (14) i izvor svjetla (17), termostat (T) i odjeljak poklopca (L), koji obuhvaća spremnik za osovinu (9a) koja nosi rotor (9), pri čemu su kućišta (12) međusobno povezana i odjeljci poklopca (L) su međusobno povezani.
14. Korištenje uređaja prema jednom od zahtjeva 11 do 13, kod kojeg generator smične sile obuhvaća rotor (9), koji je smješten odmaknuto od statora (10), naznačeno time da stator sadrži izbočine (10e) koje grade lijevak koji se sužava u ulaz (10) koji leži koaksijalno naspram rotora (9).
15. Korištenje uređaja prema jednom od zahtjeva 11 do 14, kod kojeg generator smične sile sadrži stator (10) koji je izgrađen od odlomka zida spremnika (8), koji je za odlomak opsega rotora (9) u stalnom odmaku paralelno prema rotoru (9).
16. Baza podataka na osnovi računala na nosaču podataka za korištenje u postupku za analizu postojanja prionskog proteina agregirane konformacije u uzorku biopsije sisavca povezanog s bolešću i/ili za analizu uzorka biopsije sisavca na neurodegenerativnu bolest, koja je u odnosu s prionskim proteinom agregirane konformacije, pri čemu baza podataka sadrži medicinsku dijagnozu za specifičnu neurodegenerativnu bolest i/ili podvrstu iste povezanu s predodređenim vrijednostima za količine prionskih proteina agregirane konformacije, pri čemu su vrijednosti odvojeno utvrđene za barem dva različita intenziteta smične sile za svaki prionski protein prirodne konformacije, koji je u postupku u skladu s jednim od zahtjeva 1 do 10 dodan uzorku.
17. Baza podataka na osnovi računala na nosaču podataka prema zahtjevu 16, za korištenje u postupku za analizu postojanja prionskog proteina agregirane konformacije, povezanog s bolešću, u uzorku biopsije sisavca i/ili za analizu uzorka biopsije sisavca na neurodegenerativnu bolest, koja je u odnosu s prionskim proteinom agregirane konformacije, naznačeno time da vrijednosti obuhvaćaju brzinu formiranja prionskog proteina agregirane konformacije za svaki od barem dva različita intenziteta smične sile, brzinu disocijacije prionskog proteina agregirane konformacije i/ili izvornu količinu prionskog proteina agregirane konformacije u uzorku.
HRP20200524TT 2014-07-01 2020-03-30 Postupak dijagnoze neurodegenerativnih bolesti HRP20200524T1 (hr)

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EP14175331 2014-07-01
EP14175677.5A EP2963421A1 (en) 2014-07-01 2014-07-03 Process for diagnosis of neurodegenerative diseases
EP15742188.4A EP3164716B1 (en) 2014-07-01 2015-07-01 Process for diagnosis of neurodegenerative diseases
PCT/EP2015/065044 WO2016001334A1 (en) 2014-07-01 2015-07-01 Process for diagnosis of neurodegenerative diseases

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HU (1) HUE049438T2 (hr)
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US10989718B2 (en) * 2014-09-11 2021-04-27 Amprion, Inc. Detection of misfolded alpha synuclein protein
KR20200007945A (ko) 2017-05-16 2020-01-22 암프리온, 인코퍼레이티드 미스폴딩된 타우 단백질의 검출
JP7366415B2 (ja) * 2019-07-05 2023-10-23 国立大学法人千葉大学 ホスファチジン酸センサー
US20210002712A1 (en) * 2019-07-05 2021-01-07 National University Corporation Chiba University Phosphatidic acid sensor
EP4115976A1 (en) 2021-07-05 2023-01-11 SeNostic Health GmbH Reaction vessel
CN113609204B (zh) * 2021-09-30 2021-12-24 深圳前海环融联易信息科技服务有限公司 数据关联特征分析方法、装置、设备及介质
WO2023178049A1 (en) * 2022-03-14 2023-09-21 Genentech, Inc. Predicting neurodegenerative diseases based on speech analyses
EP4389272A1 (en) 2022-12-19 2024-06-26 Prosperodes GmbH Reaction vessel with stator insert and rotor

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EP2489427A1 (en) 2011-02-16 2012-08-22 Helmholtz-Zentrum für Infektionsforschung GmbH Device and method for production and analysis of prions
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