GB2311370A - Method and composition for the internal identification of samples - Google Patents

Method and composition for the internal identification of samples

Info

Publication number
GB2311370A
GB2311370A GB9713093A GB9713093A GB2311370A GB 2311370 A GB2311370 A GB 2311370A GB 9713093 A GB9713093 A GB 9713093A GB 9713093 A GB9713093 A GB 9713093A GB 2311370 A GB2311370 A GB 2311370A
Authority
GB
United Kingdom
Prior art keywords
identification
oligonucleotide
oligonucleotides
different
sample
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
GB9713093A
Other versions
GB2311370B (en
GB9713093D0 (en
Inventor
James M Dunn
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Visible Genetics Inc
Original Assignee
Visible Genetics Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Visible Genetics Inc filed Critical Visible Genetics Inc
Publication of GB9713093D0 publication Critical patent/GB9713093D0/en
Publication of GB2311370A publication Critical patent/GB2311370A/en
Application granted granted Critical
Publication of GB2311370B publication Critical patent/GB2311370B/en
Anticipated expiration legal-status Critical
Expired - Fee Related legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Plant Pathology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

Patient samples are identified by adding to the sample, preferably at the lime it is taken, a plurality of identification oligonucleotides. The identification oligonucleotides are co-processed and sequenced at the same time as the sample. The resulting sequence analysis thus provides both the sequence of the region of interest in the sample DNA, and the sequence of the identification oligonucleotides which are used to confirm the identity of the patient. In an embodiment of the invention, a plurality of specially constructed identification oligonucleotides is used. Each identification oligonucleotide is constructed based upon a starting oligonucleotide and comprises: a) a primer site which is not homologous with DNA from the organism from which the sample is taken and which may be the same or different from the primer site of the other identification oligonucleotides, and b) an identification region having the general formula -(M-N) x - or -(M-N-N) x -, wherein N, represents a nucleotide residue which is the same in the identification oligonucleotide as in the starting oligonucleotide, M represents a nucleotide residue which may be the same as or different from the starting oligonucleotide, with the proviso that at least one M residue in the identification region is different from the starting oligonucleotide, and x is an integer from 3 to 20. To ensure that there is no overlap between different sets of identification oligonucleotides, the identification oligonucleotides may be constructed such that the identification regions of each set are located at a different place along the starting oligonucleotide.
GB9713093A 1994-12-22 1995-12-14 Provision of internal identification to a sample comprising a target nucleic acid, prior to sequence analysis Expired - Fee Related GB2311370B (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US08/361,757 US5776737A (en) 1994-12-22 1994-12-22 Method and composition for internal identification of samples
PCT/CA1995/000691 WO1996019586A1 (en) 1994-12-22 1995-12-14 Method and composition for internal identification of samples

Publications (3)

Publication Number Publication Date
GB9713093D0 GB9713093D0 (en) 1997-08-27
GB2311370A true GB2311370A (en) 1997-09-24
GB2311370B GB2311370B (en) 1998-12-02

Family

ID=23423339

Family Applications (1)

Application Number Title Priority Date Filing Date
GB9713093A Expired - Fee Related GB2311370B (en) 1994-12-22 1995-12-14 Provision of internal identification to a sample comprising a target nucleic acid, prior to sequence analysis

Country Status (6)

Country Link
US (1) US5776737A (en)
AU (1) AU4113696A (en)
CA (1) CA2208428A1 (en)
DE (1) DE19581886T1 (en)
GB (1) GB2311370B (en)
WO (1) WO1996019586A1 (en)

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Also Published As

Publication number Publication date
GB2311370B (en) 1998-12-02
GB9713093D0 (en) 1997-08-27
US5776737A (en) 1998-07-07
WO1996019586A1 (en) 1996-06-27
DE19581886T1 (en) 1998-05-07
AU4113696A (en) 1996-07-10
CA2208428A1 (en) 1996-06-27

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PCNP Patent ceased through non-payment of renewal fee

Effective date: 20061214