GB201914537D0 - Transcript analysis - Google Patents

Transcript analysis

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Publication number
GB201914537D0
GB201914537D0 GB201914537A GB201914537A GB201914537D0 GB 201914537 D0 GB201914537 D0 GB 201914537D0 GB 201914537 A GB201914537 A GB 201914537A GB 201914537 A GB201914537 A GB 201914537A GB 201914537 D0 GB201914537 D0 GB 201914537D0
Authority
GB
United Kingdom
Prior art keywords
transcript analysis
transcript
analysis
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
GB201914537A
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of Southampton
Original Assignee
University of Southampton
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University of Southampton filed Critical University of Southampton
Priority to GB201914537A priority Critical patent/GB201914537D0/en
Publication of GB201914537D0 publication Critical patent/GB201914537D0/en
Ceased legal-status Critical Current

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GB201914537A 2019-10-08 2019-10-08 Transcript analysis Ceased GB201914537D0 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
GB201914537A GB201914537D0 (en) 2019-10-08 2019-10-08 Transcript analysis

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
GB201914537A GB201914537D0 (en) 2019-10-08 2019-10-08 Transcript analysis

Publications (1)

Publication Number Publication Date
GB201914537D0 true GB201914537D0 (en) 2019-11-20

Family

ID=68541207

Family Applications (1)

Application Number Title Priority Date Filing Date
GB201914537A Ceased GB201914537D0 (en) 2019-10-08 2019-10-08 Transcript analysis

Country Status (1)

Country Link
GB (1) GB201914537D0 (en)

Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US741780A (en) 1896-04-17 1903-10-20 John H Elward Cultivator.
WO2004002627A2 (en) 2002-06-28 2004-01-08 President And Fellows Of Harvard College Method and apparatus for fluid dispersion
US7041481B2 (en) 2003-03-14 2006-05-09 The Regents Of The University Of California Chemical amplification based on fluid partitioning
US20080003142A1 (en) 2006-05-11 2008-01-03 Link Darren R Microfluidic devices
US20100137163A1 (en) 2006-01-11 2010-06-03 Link Darren R Microfluidic Devices and Methods of Use in The Formation and Control of Nanoreactors
WO2016040476A1 (en) 2014-09-09 2016-03-17 The Broad Institute, Inc. A droplet-based method and apparatus for composite single-cell nucleic acid analysis

Patent Citations (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US741780A (en) 1896-04-17 1903-10-20 John H Elward Cultivator.
WO2004002627A2 (en) 2002-06-28 2004-01-08 President And Fellows Of Harvard College Method and apparatus for fluid dispersion
US20050172476A1 (en) 2002-06-28 2005-08-11 President And Fellows Of Havard College Method and apparatus for fluid dispersion
US7708949B2 (en) 2002-06-28 2010-05-04 President And Fellows Of Harvard College Method and apparatus for fluid dispersion
US20100172803A1 (en) 2002-06-28 2010-07-08 President And Fellows Of Harvard College Method and apparatus for fluid dispersion
US7041481B2 (en) 2003-03-14 2006-05-09 The Regents Of The University Of California Chemical amplification based on fluid partitioning
US20100137163A1 (en) 2006-01-11 2010-06-03 Link Darren R Microfluidic Devices and Methods of Use in The Formation and Control of Nanoreactors
US20080003142A1 (en) 2006-05-11 2008-01-03 Link Darren R Microfluidic devices
US20080014589A1 (en) 2006-05-11 2008-01-17 Link Darren R Microfluidic devices and methods of use thereof
EP2047910A2 (en) 2006-05-11 2009-04-15 Raindance Technologies, Inc. Microfluidic devices
WO2016040476A1 (en) 2014-09-09 2016-03-17 The Broad Institute, Inc. A droplet-based method and apparatus for composite single-cell nucleic acid analysis

Non-Patent Citations (20)

* Cited by examiner, † Cited by third party
Title
BENTLEY DRBALASUBRAMANIAN S ET AL., NATURE, vol. 456, no. 7218, 2008, pages 53 - 59
FINAK GMCDAVID AYAJIMA MDENG JGERSUK VSHALEK AK ET AL.: "MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data", GENOME BIOL, vol. 16, 2015, pages 278
GIERAHN TMWADSWORTH MH, 2NDHUGHES TKBRYSON BDBUTLER ASATIJA R ET AL.: "Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput", NAT METHODS, vol. 14, no. 4, 2017, pages 395 - 8
HASHIMSHONY TWAGNER FSHER NYANAI I: "CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification", CELL REP, vol. 2, no. 3, 2012, pages 666 - 73, XP055111758, DOI: 10.1016/j.celrep.2012.08.003
HUGHES TKWADSWORTH MHGIERAHN TMDO TWEISS DANDRADE PR ET AL.: "Highly Efficient, Massively-Parallel Single-Cell RNA-Seq Reveals Cellular States and Molecular Features of Human Skin Pathology", BIORXIV, 2019, pages 689273
KLEIN AMMAZUTIS LAKARTUNA ITALLAPRAGADA NVERES ALI V ET AL.: "Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells", CELL, vol. 161, no. 5, 2015, pages 1187 - 201, XP055569619, DOI: 10.1016/j.cell.2015.04.044
LUN ATLRIESENFELD SANDREWS TDAO TPGOMES T ET AL.: "EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data", GENOME BIOL, vol. 20, no. 1, 2019, pages 63
MACOSKO ET AL., CELL, vol. 161, no. 5, 21 May 2015 (2015-05-21), pages 1187 - 1201
MACOSKO EZBASU ASATIJA RNEMESH JSHEKHAR KGOLDMAN M ET AL.: "Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets", CELL, vol. 161, no. 5, 2015, pages 1202 - 14, XP055586617, DOI: 10.1016/j.cell.2015.05.002
MELSTED PBOOESHAGHI ASGAO FDA VEIGA BELTRAME ELU LHJORLEIFSSON KE ET AL.: "Modular and efficient pre-processing of single-cell RNA-seq", BIORXIV, 2019, pages 673285
NIEDRINGHAUS ET AL., ANALYTICAL CHEMISTRY, vol. 83, no. 12, 2011, pages 4327 - 4341
RIEMONDY KARANSOM MALDERMAN CGILLEN AEFU RFINLAY-SCHULTZ J ET AL.: "Recovery and analysis of transcriptome subsets from pooled single-cell RNA-seq libraries", NUCLEIC ACIDS RES., vol. 47, no. 4, 2019, pages e20
SAIKIA MBURNHAM PKESHAVJEE SHWANG MFZHEYANG MMORAL-LOPEZ P ET AL.: "Simultaneous multiplexed amplicon sequencing and transcriptome profiling in single cells", NAT METHODS, vol. 16, no. 1, 2019, pages 59 - 62, XP036661430, DOI: 10.1038/s41592-018-0259-9
SALOMON RKACZOROWSKI DVALDES-MORA FNORDON RENEILD AFARBEHI N ET AL.: "Droplet-based single cell RNAseq tools: a practical guide", LAB CHIP, vol. 19, no. 10, 2019, pages 1706 - 27
TANG FLAO KSURANI MA: "Development and applications of single-cell transcriptome analysis", NAT METHODS, vol. 8, no. 4, 2011, pages S6 - 11
TRAAG VAWALTMAN LVAN ECK NJ: "From Louvain to Leiden: guaranteeing well-connected communities", SCI REP, vol. 9, no. 1, 2019, pages 5233
VIEIRA BRAGA FAKAR GBERG MCARPAIJ OAPOLANSKI KSIMON LM ET AL.: "A cellular census of human lungs identifies novel cell states in health and in asthma", NAT MED., vol. 25, no. 7, 2019, pages 1153 - 63, XP036901109, DOI: 10.1038/s41591-019-0468-5
VILLANI ACSATIJA RREYNOLDS GSARKIZOVA SSHEKHAR KFLETCHER J ET AL.: "Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors", SCIENCE, vol. 356, no. 6335, 2017, XP055422383, DOI: 10.1126/science.aah4573
WOLF FA ET AL.: "SCANPY: large-scale single-cell gene expression data analysis", GENOME BIOL., vol. 19, no. 1, 2018, pages 15
WOLF FAANGERER PTHEIS FJ: "SCANPY: large-scale single-cell gene expression data analysis", GENOME BIOL, vol. 19, no. 1, 2018, pages 15

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Legal Events

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AT Applications terminated before publication under section 16(1)