GB1588550A - Cytidine derivative - Google Patents

Cytidine derivative Download PDF

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GB1588550A
GB1588550A GB24858/78A GB2485878A GB1588550A GB 1588550 A GB1588550 A GB 1588550A GB 24858/78 A GB24858/78 A GB 24858/78A GB 2485878 A GB2485878 A GB 2485878A GB 1588550 A GB1588550 A GB 1588550A
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trifluoromethyl
deoxycytidine
composition
f3methyl
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University of Miami
PCR Inc
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PCR Inc
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/06Pyrimidine radicals

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Description

(54) CYTIDINE DERIVATIVE (71) We, PCR, INC., a corporation duly organised and existing under the laws of the State of Florida, United States of America, of P.O. Box 1466, Gainesville, Florida 32601 U.S.A., and the UNIVERSITY OF MAIMI, a non-profit organisation duly organised and existing under the laws of the State of Florida, United States of America of 141 Ashe Building Coral Gables, Florida 33124, United States of America, do hereby declare the invention for which we pray that a patient may be granted to us, and the method by which it is to be performed, to be particularly described in and by the following statement: The present invention relates to 5-trifluoromethyl-2'-deoxycytidine (hereinafter sometimes referred to as F3methyl dC).
Diseases caused y Herpes and Herpes-like viruses are particularly widespread in man. Examples of Herpes viruses are Herpes simplex virus (HSV) Types 1 (HSVMl) and 2 (HSV-2f, and Herpes varicella-zoster virus (VZV) that causes chicken pox in children and shingles in adults. Other examples of Herpes-like viruses are Epstein-Barr virus, Pseudorabies virus, Cytomegalo virus, Marek's disease virus of chickens, equine abortion virus (EAV) and Luckefrog virus.
Herpes simplex viruses are strongly implicated in many pathological systems and include ocular (Keratitis), cutaneous (including genital and oral), and systemic disseminated infections. One disease caused by the Herpes simpiex virus Type 1 (HSV-l) is a particularly virulent form of encephalitis which, if not treated effectively, is usually fatal. It is also known that Herpes and Herpes-like viruses are implicated in Infectious Mononucleosis, Burkitt's Lyphoma, and Nasopharyngeal Carcinoma. Recurrent and persistent genital infections occur with HSV-2 that are widespread in the population and defy management so that these patients suffer great physical discomfort and psychological distress. HSV-l causes substantial discomfort to a large segment of the population. There is at this time no known way to manage recurrent infections or to combat-this virus in its latent stage.
Varicella-zoster is often the cause of morbidity in immunosuppressed patients such as kidney transplant recipients and cancer patients. Cytomegalo virus causes embryological abnormalities, perinatal neurological disease and great problems in the neonate; like zoster, it is a neurotropic virus.
An extremely active area of current medical research is the study of viruscaused diseases, in particular those induced by Herpes and Herpes-like viruses. An important part of this research is the development of selective antiviral agents for the treatment of these diseases. Another aspect of these studies is the development of an effective antineoplastic agent that will selectively kill rapidly dividing cells.
Although significant progress has been made in the development of antiviral agents and agents suitable for use in cancer chemotherapy, there are, to date, no completely satisfactory agents available. As will be discussed in more detail below, the major problem with the antiviral and chemotherapeutic agents presently available is their tendency to undergo catabolism in the body and, more importantly, their toxicity towards uninfected cells; that is, their nonselectivity.
This has also been a problem with nucleic acid constiutent analogs that are used as 'atineoplastic agents.
The search for effective antiviral agents which exhibit specific antiviral activity against cells infected with Herpes and Herpes-like viruses has met with varying degrees of success. In 1962, Kaufman (IDU Therapy of Herpes Simplex, Arch.
Ophthalmol. 67, 583, 1962) investigated the antiviral activity of certain 5-halodeoxyuridine compounds and found that 5-iodo-2'-deoxyridine (IdU) exhibits antiviral activity against HSV infections of the eye. Subsequently, Heidelberger discovered that, while 5-fluorodeoxyuridine exhibits very little antiviral activity, 5trifluoromethyl-2-'-deoxyuridine, or 5-trifluoro thymidine (F3dT), does exhibit antiviral activity against infections of the eye. The compound F3dT is described and claimed in United States Patent 3,201,387.
Although IdU is effective against Herpes Keratitis it is less effective than F3dT and is not as effective in systemic infections or in the treatment of Herpes genitalis.
Despite exhibiting antiviral activity, these two compounds (IdU and F3dT) suffer from two major disadvantages. The first is that the compounds undergo rapid catabolism in the body which results in significant reduction of antiviral effectiveness of the compound. The second disadvantage is that the compounds exhibit toxicity towards uninfected cells which, in turn, results in the generation of unpleasant and harmful side effects. IdU has been abandoned for the treatment of Herpes encephalitis because of its toxicity and its ineffectiveness, and F3dT has not been considered for the treatment of systemic infections. There are some approaches that involve direct intracranial injection of this compound for the treatment of encephalitis; however, the studies are still at the stage of animal models. Furthermore, the approach to treatment appears to be associated with potential hazards for use in humans.
Studies -n various 5-substituted analogs of deoxyuridine, including 5-methyl amino-2-'-deoxyuridine, 5-thiocyanato-2'-deoxyuridine, 5-ethyl-2'-deoxyuridine, 5 propyl-2'-deoxyuridine, 5-phenyl-2'-deoxyuridine and 5-allyl-2'-deoxyuridine have been reported which indicate that these compounds do exhibit antiviral activity against Herpes simplex in cell structure; however, the success of these compounds will likely remain limited to cell culture studies, in spite of the fact that they are non-toxic in culture, for they are substrates for the catabolic enzymes uridine and thymidine phosphorylase.
Adenine arabinoside has been shown to decrease the incidence of death due to human encephalitis. However, the number of individuals with neurological sequelae was discouraging. That is, the drug decreased the mortality but increased the morbidity. Furthermore, ara-A or ara-AMP is neither effective against recurrent genital Herpes nor does it decrease the incidence of latent virus infection. Phosphonacetic acid is effective in animal systems; however it must be administered in most cases very soon after infection, and is usually ineffective if the onset of treatment is delayed to coincide with realistic intervals for consideration for use in humans.
Other drugs such as ara-T 4-amino-5-iodo-deoxyuridine and acyloguanine are in various stages of development and are far from being ready for use in clinical studies. Furthermore, in view of the capacity of viruses to mutate to resistance to a drug (as is the case with phosphonacetic acid) it is likely that ultimately viral chemotherapy will involve a combination of drugs that act via different mechanisms.
In -the field of cancer research, a very effective drug, 5-fluorouracil, was developed by C. Heidelberger. The potential to surpass this drug as an effective inhibitor of rapidly growing tumors was indicated upon his synthesis of F3dT.
However, F3dT is rapidly catabolized in humans so that it has been abandoned for further investigation as an anticancer agent.
More recently, attention has turned to the study of deoxycytidine compounds as possible antiviral agents and, in particular, the 5-substitued analogs thereof.
Greer et al. (Annals of the New York Academy of Sciences, Volume 255, 359, 1975) have studied the antiviral activity of 5-halo-2'-deoxycytidines, namely 5-bromo-2'deoxycytidine (BrdC) and 5-iodo-2'-deoxycytidine (IdC). The studies have shown that these 5-halo-2'-deoxycytidine compounds possess a similar antiviral activity against HSV infected cells as that possessed by the corresponding 5-halo-2'deoxyuridine compounds, but most importantly that the 5-halo-2'-deoxycytidine compounds are substantially less toxic towards uninfected cells than the deoxyuridine compounds. Kurimoto et al. Folia. Ophthalmol. Japan; 20, 49 (1969) have shown that IdC is more effective in the treatment of Herpes Keratitis in humans than IdU.
A drawback of the 5-halo-2'-deoxycytidine compounds is their tendency to undergo deamination in the presence of deaminating enzymes, such as cytidine deaminase. Such enzymes are usually present in the blood and catalyze the deamination of the 5-halo-2'-deoxycytidine compound to the corresponding 5halo-2'-deoxyuridine compound. As a result of this deamination, uridine compounds are formed which do not display selectivity and which exhibit toxicity towards uninfected cells and generate unpleasant and harmful side effects.
Furthermore, deoxyridine analogs are further degraded to metabolites that do not display antiviral activity.
In order to overcome this problem of deamination, it has been found necessary to employ a deamination inhibitor, and tetrahydrouridine (H4U) and 2'deoxytetrahydrouridine (H4dU) have been found particularly suitable for this purpose. These two compounds are described in United States Patent 4,017,606 (Hanze et al.). The patent describes the synethesis of H4U and H4dU starting from a compound whose general formula covers the compound 5-triluoromethyl-2' deoxycytidine(F3methyl dC) which forms the subject of the present invention.
However, there is no specific disclosure of F3methyl dC in the Hanze et al. patent and there is no disclosure of any utility of F3methyl dC as an antiviral agent.
Studies have been recently reported of the antiviral activity of 5-methyl-2'deoxycytidine and 5-ethyl-2'-deoxycytidine. Shugar (J. Med. Chem., Vol. 17, No. 3 296,1974) discovered that 5-ethyl-2'-deoxycytidine possesses only a low antiviral activity against HSV infected cells and no activity against vaccinia and vesicular stomatitis. Very recent studies by Lin and Prusoff (Astracts of Papers, 174th ACS Meeting, American Chemical Society, August 28-September 2, 1977) have shown that 5-methyl-2'-deoxycytidine is less effective as an antiviral agent against HSV infected cells than 5-methyl-2'-deoxyuridine.
The compound 5-trifluoromethyl-2'-deoxycytidine (also called F3methyl dC) having the formula:
(F3methyl dC) exhibits several surprising and unexpected advantages over the prior antiviral agents discussed above. In particular, the compound F3methyl dC exhibits an increased specificity towards cells.from humans and animals infected with Herpes and Herpes-like viruses. It is not anabolized to a cytotoxic metabolite in uninfected cells. Furthermore, F3methyl dC shows a substantially increased metabolic stability which results in a sustained antiviral activity. The compound exhibits a substantially pronounced antiviral activity at non-cytotoxic concentrations.
5-trifluoromethyl-2'-deoxycytidine is prepared by reacting 5-trifluoromethyl2-'-deoxyridine (F3dU), in which the free hydroxy groups have been protected, with ammonia. The reaction is generally carried out at an elevated temperature which does not exceed the decomposition temperatures of the starting materials or the end products. The reaction temperature can generally vary from about 50"C to 250"C, and preferably from about 60"C to 1000 C. It has been found in practice that temperatures of about 60"C to 800C give most satisfactory results. The precise temperature at which the reaction is carried out will, of course, depend on the nature of the reactants and the solvents employed, and the most appropriate temperature can be readily determined by routine experimentation.
It is generally necessary to protect the free hydroxy groups before amination will proceed satisfactorily. It is possible to employ any suitable protecting group, although for ease of handling it is generally preferred to use a blocking or protecting group which produces a crystalline rather than a liquid product. It has been found that synthesis proceeds most satisfactorily using a silyl protecting group such as the trimethylsilyl group, which can be introduced according to the procedure described by Vorbriiggen and Niedballa, Angew. Chem. Internat. Edit.
Volume 10, No. 9, 657 (1971), the disclosure of which is hereby incorporated by reference. Thus, the reaction is preferably carried out by reacting 5trifluoromethyl-2'-deoxyuridine (F3dU) with a silylating agent such as hexamethyldisilazane (HMDS) or trimethylsilychloride (trimethylchlorosilane or TMCS) in the presence of excess ammonia. The silyating agent is usually employed in an excess and serves as a solvent for the reaction as well as the silylating agent. It is also possible to use different protecting groups on different free hydroxy groups.
For instance, the 2,4-positions of the pyrimidine ring can be protected by reaction with one type of protecting group agent, and the hydroxy groups on the deoxyfuranosyl ring can be protected by use of a different protecting group.
The reaction is usually carried out for at least ten hours, more usually twenty to fifty hours. It is not essential to conduct the reaction under superatmospheric pressure, but it has been found advantageous to conduct the reaction in a sealed tube or in an autoclave to avoid undue loss of ammonia during the heating process.
When the reaction is carried out in an autoclave or sealed tube, pressures of 50-200 psi, more preferably 60-80 psi, have resulted in good yields of the desired compound F3methyl dC.
When the reaction is completed, the resulting reaction mixture is usually an oily brown liquid which can be worked up according to conventional techniques to yield the desired compound F3methyl dC as a white crystalline solid. The compound F3methyl dC is insoluble in acetone and partially soluble in water, and can be satisfactorily recrystallized from hot water.
A surprising and unexpected feature of the preparation is the stability of the Cf group under the reaction conditions. The literature teaches that heating 5trifluoromethyl-2'-deoxy-3',5'-di-O-tolyluridine with methanolic ammonia in a steel bomb at about 100"C forms entirely the 5-carbomethoxynucleoside (Ryan et al., J.
Org. Chem., 31, 1181(1966). It is possible that the presence of a protecting group in the pyrimidine ring changes the course of the reaction.
Another surprising and unexpected feature of the preparation of F3methyl dC is that silylation/amination reaction does not proceed in the absence of an N,substituent. Thus, reaction of 5-trifluoromethyluracil with HMDS and excess ammonia according to the reaction conditions described above does not yield the corresponding amine compound, as illustrated by Comparative Example A hereinbelow.
The starting compound, 5-trifluoromethyl-2'-deoxyuridine (trifluorothymidine) can be prepared by procedures such as those described in Heidelberger et al., J. Am. Chem. Soc., 34, 3597 (1962) and J. Med. Chem., 7, 1 (1964) and United States Patent 3,201,387, and Ryan et al., J. Org. Chem., 31, 1181 (1966).
In the silylation reaction described above, it has been found that a mixture of HMDS and a small amount of TMCS will produce a higher yield or faster reaction, as apparently a small amount of TMCS produces a catalytic effect. This effect is disclosed in United States Patent 4,024,143, issued May 17, 1977, the disclosure of which is hereby incorporated by reference for the teaching of silylation reactions therein.
The preferred silylating agents have been described hereinabove. Broadly speaking, the silylation reaction can be conducted using at least a stoichiometric amount of silylating agent which is: silane of the formula (R')3SiX wherein R' is lower alkyl and X is halogen, and/or disilazane of the formula [(Rt)3Si]2NH wherein R' is lower alkyl at a temperature of about room temperature to the boiling point of the reaction mixture. The lower alkyl groups of the above formulae contain from I to 4 carbon atoms.
The authenticity of the compound of the present invention is established by the following procedure wherein F3dT is trifluorothymidine (5-trifluoromethyl-2'deoxyuridine).
F3dT (R,=0.43) and F3methyl dC (R,=0.80 are separable in a chromatography system consisting of Whatman 3MM and H2O saturated n-butanol-NH3 (100 ml H2O saturated n-butanol + I ml concentrated NH4OH). Incubation of F3methyl dC with a crude source of cytidine deaminease extract of human epidermoid carcinoma (HEP-2 cells) resulted in the formation of an R,=0.43 spot and disappearance of the 0.80 spot on the above chromatography system. F3dT incubated with cytidine deaminase remained unchanged chromatographically.
The results of incubation with HNO2 (pH 4.5) at room temperature were identical to those obtained above. Incubation of F3methyl dC for 9 hours resulted in approximately 98% conversion to a product that has the same Rf as F3dT in the same solvent system described above. FadT remained unaltered. Incubation of F3methyl dC and F3dT with an acetate buffer (pH 4.5) for 9 hours did not lead to modification of the deoxyribonucleosides.
The following spots were eluted into H2O and scanned from 225 to 350 nm: a) standard, b) F3methyl dC standard, c) R,=0.43 spot after cytidine deaminase treatment of F3dT and d) R,=0.43 spot after cytidine deaminase treatment of F3methyl dC. The u.v. absorption profile of F3dT derived from deamination of F3methyl dC is identical to that obtained with authentic F3dT.
Solutions a, c, and d, above, were adjusted to the same 0. D. and used as substrates for HSV-2 induced pryimidine deoxyribonucleoside kinase. Results: SOLUTION nmoles phosphorylated/60min.
a 0.07 c 0.08 d 0.05 Thus, the product of cytidine deaminase treatment of F3methyl dC (d) was phosphorylated to the same extent as F3dT.
Stock solutions of F3dT and F3methyl dC were made up and adjusted to the same concentration as the F3dT and F3methyl dC purified chromatographically (solutions a and b, respectively). Usually, F3methyl dC is phosphorylated 1/6 of the extent that F3dT is phosphorylated. This experiment was performed to determine if the chromatographic purification of F3methyl dC described above resulted in better phosphorylation relative to F3dT. This experiment was performed twice.
Results: nmoles phosporylated/4 hrs Standard F3dT 0.48 (0.57) Solutions F3methyl dC 0.48 (0.08) Approx 1/6 no significant difference in ratios Chromatog. F3dT 0.16 (0.19) purified F3methyl dC 0.04 (0.06) Approx 1/3 to 1/4 Values for chromatographically purified samples are probably lower due to impurities arising from non-acid washed paper.
Other chromatographic systems and chemical analysis, including thin-layer chromatography, can be utilized to confirm the authenticity of the compound. The state of purity of the compound tested in the determinations described above was approximately 80%.
The analysis for C1oHl2 F3N3O4 was as follows: Calculated: C 40.67; H 4.06; N 14.23 Found : C 40.63; H 3.80; N 13.08 F3methyl dC exhibits surprisingly selective antiviral activity, particularly against human and animal cells infected with HSV-1 and HSV-2 viruses, as well as against cells infected with Herpes-varicella-zoster virus (VZV). Further, F3methyl dC exhibits a surprising and unexpected increase in metabolic stability which results in low cell cytotoxicity, when used in connection with a cytidine deaminase inhibitor, such as tetrahydrouridine, as compared to other compounds, such as trifluorothymidine, used with or without an inhibitor. The combination of high antiviral activity and low cell cytotoxicity results in the ability of F3methyl dC to be -used in such low amounts, while still retaining effective antiviral acitivity, that the cytotoxcity towards uninfected cells is minimized.
Because transformed cells express the Herpes encoded enzyme activity and are selectively sensitive to F3methyl dC, it is expected that F3methyl dC will possess the capacity to affect latent infections which are severe problems that involve the neurotropic aspects of these viruses.
F3methyl dC should be useful in the treatment of various Herpes involved disease states, such as Nasopharyngeal carcinoma and Burkit's Lymphoma.
In addition, the compound F3methyl dC should find utility as a cancer chemotherapetic agent in view of its projected ability to inhibit the enzyme thymidylate synthetase if, as expected, it is metabolized to F3dTMP (the monophosphate). It is known that thymidylate synthetase is the target enzyme of 5-flurouracil chemotherapy. It is expected that F3methyl dCMP will be slowly converted into F3dTMP and inhibit cells as they are recruited into the S-phase (the phase of DNA synthesis). That is, F3methyl dC cduld then serve as a storage form of a potential inhibitor of cancer cells.
A further projected utility for F3methyl dC is entry into DNA with ability to terminate DNA synthesis in the cancerous cell. Concentrations of F3methyl dC which are projected as chemotherapeutic agent for cancer chemotherapy are approximately one order of magnitude higher than those projected for viral chemotherapy, as described hereinafter. It is known that certain tumors have high levels of cytidine deaminase. Such tumors are resistant to ara-C chemotherapy, but such tumors may deaminate the F3methyl dC at the tumor site to convert the F3methyl dC into a potential selective inhibitor of cancerous cells, with the F3methyl dC converted at a significantly lower rate in non-cancerous tissues. In such applications, it is anticipated that the F3methyl dC will be administered without the coadministration of a cytidine deaminase inhibitor.
F3methyl dC may be formulated into pharmaceutical compositions comprising, as the principal active ingredient, pharmaceutically effective amounts of F3methyl dC together with a pharmaceuticalfy acceptable carrier or diluent, for intraperitoneal administration for animal studies, intravenous, subcutaneous, intramuscular, oral or topical administration. The concentration of the compound in the composition may vary from about 0.01 to 50% by weight depending on the route of administration, the frequency of administration, the severity of the condition, the age, weight and general physical condition of the patient being treated. When the composition is in the form suitable for topical administration, for example a cream, the concentration of F3methyl dC will generally vary from about 5 to 50 wt.%, preferably about 5 to 20 wt.%, more preferably from about 5 to 10 wt.%. When the composition is in the form suitable for intraperitoneal administration for animal studies, for example, an aqueous solution of F3methyl dC, the concentration of F3methyl dC will generally vary from about 0.5 to 5% w/v, more usually about 1% w/v. For oral administration, the concentration of F3methyl dC will generally be from 0.05 to 10 wt.%, preferably about 0.5 to 5 wt;%, and more preferably about 1 to 2 wt.%.
When F3methyl dC is used for intravenous injection, the concentration of the compound will vary from about 0.05 to about 5% w/v, preferably about 0. I to about 0.5% w/v. For intramuscular injection, the same concentrations as described above for the intraperitoneal mode of administration will be utilized. Furthermore, in certain instances, such as for certain types of encephalitis, intracranial injection may be utilized.
Other methods of administration may also be used. Suppositories may be used for certain types of viral infections, and it is possible that for some applications the F3methyl dC will be administered in the form of slow-release surgical implants.
The pharmaceutically acceptable carrier or diluent employed in the compositions of the present invention may be any compatible non-toxic material suited for mixing with the active compound F3methyl dC. When the composition is in a form suitable for parenteral use, for example intramuscularly or intravenously, the carrier which preferably is an aqueous vehicle, may also contain other conventional additives, such as a suspending agent for example methyl cellulose or polyvinylpyrrolidone (PVP), and a conventional surfactant. For oral administration, the compositions can be formulated as aqueous solutions, suspensions, capsules or tablets, suitably containing appropriate carriers or diluents, for example lactose, starch and/or magnesium stearate. In certain instances increased antiviral activity may be obtained by coadministration of DMSO, which is also a solvent for the F,methyl dC.
In order to inhibit the deaminating effect of enzymes such as cytosine deaminase, with the consequent reduction in antiviral activity, it is necessary for antiviral uses to coadminister either previously or with the compound F3methyl dC, a deamination inhibiting agent, such as tetrahydrouridine (H4U) or 2'deoxytetrahydrouridine (H4dU). Thus, the antiviral pharmaceutical compositions comprise (as the principal active ingredient) a pharmaceutically effective amount of F3methyl dC, together with inhibiting amounts of a cytidine deaminase inhibitor, for example, tetrahydrouridine or 2'-deoxytetrahydrouridine. A pharmaceutically acceptable carrier or diluent such as described above is generally present, depending on the nature of the composition. Tetrahydrouridine and 2'deoxytetrahydrouridine are not toxic in man at extremely high concentrations.
Furthermore, they are relatively metabolically stable. The weight ratio of tetrahydrouridine or 2'-deoxytetrahydrouridine to F3methyl dC can be 500:1 to 1:1, but more usually will be about 20:1 to about 5:1.
To determine the toxicity of F3methyl dC or other antiviral agents to uninfected cells, non-confluent cultures of human epidermoid laryngeal carcinoma (HEp-2) cells were treated with nucleoside analogs at varying concentrations for 48 hours, at which time the monolayer of cells is washed with phosphate buffered saline in order to remove any residual analogs. The cells are then trypsinized to remove them from the culture dishes and are replated at various dilutions. At 7 days the cultures are stained and colonies of 50 cells or greater are counted as one viable cell. Viability, which is a valid parameter of toxicity is thus determined by replating the cells. Therefore, toxicity is measured in terms of cellular replication: colony formation.
Figure 1 indicates the cytotoxicity of F3methyl dC and F3dT and without H4U against HEp2 cells (see Table I for similar data for F3methyl dC). The dramatic enhancement of survival that is obtained when cells are grown in F3methyl dC and H4U will be readily noted.
To demonstrate inhibition of viral replication, HSV types 1 or 2 are adsorbed to HEp2 cells at low multiplicities for two hours at 370C. The culture medium containing the nucleoside analogs at varying concentrations are added to the infected cultures. In the case of Hep-2 cells which contain high deaminase levels, H4U is incorporated into the medium. At 48 hours, virus is harvested from the cultures by freezing and thawing. The virus produced from each culture is titred by plaque assay in BHK cells. By using this protocol the antiviral effectiveness of F3methyl dC can be compared directly with the effectiveness of other antiviral agents. Furthermore, by including H4U in the medium, the effectiveness of F3methyl dC can be determined without deamination at the nucleoside level.
Figure 2 demonstrates the antiviral activity of F3methyl dC and F3dT, with and without H4U against HSV-2. The results indicate that the compounds are equally potent antiviral agents. An examination of Table II or a comparison with Figure 1, however, reveals that F3methyl dC (+H4U) is only marginally cytotoxic at concentrations that possess effective antiviral activity, whereas F3methyl dC (without H4U) and F3dT+H4U are extremely cytotoxic concentrations at which they display antiviral activity. This then indicates a high therapeutic index for F3methyl dC and H4U.
Table III indicates that when cells are grown on F3methyl dC about a 5-fold increased survival can be obtained with the use of 2'-deoxytetrahydrouridine (H4dU) than with H4U without impairing the effectiveness of the antiviral activity of F3methyl dC vs. HSV-2.
Figure 3 indicates the antiviral activity of F3methyl dC and F3dT with and without H4U vs. HSV-l. Note that F3methyl dC + H4U displays more potent antiviral activity than F3dT + H4U.
A summary of the cogent data is shown in Table IV. F3methyl dC + H4U is an effective antiviral agent at concentrations that display marginal to only moderate cytotoxicity.
Animal patients, including humans, suffering from diseases caused by Herpes and Herpes-like viruses can be treated by administering to the patient a pharmaceutically effective amount of F3methyl dC preferably in the presence of an deamination inhibitor and optionally, but preferably in the presence of a pharmaceuticallly acceptable carrier or diluent.
For the treatment of systemic infections, the F3methyl dC of the present invention will preferably be administered by intravenous injection and less likely, but possibly, by oral administration. For the case of topical infection, the F3methyl dC will most likely be administered topically.
It has been found that particularly advantageous results are obtained when the dosage of the compound F3methyl dC to the patient is from about 0.01 mmoles/kg to 0.25 mmoles/kg per day for 7 days. That is, 3 mg/kg body weight to 75 mg/kg body weight; for example, about 10 mg/kg body weight per day for 7 days or 700 mg for a 70 kg man per day for 7 days. These projections are based on studies with the mouse in which it was found that a 60% survival was obtained with 250 mg F3methyl dC per kg once per day for 7 days with H4U coadministered one hour prior to the F3methyl dC. 100 per cent survival was obtained with a dose of 50 mg. F3methyl dC per kg/day for 7 days when it was coadministered with H4U. The LD50 for F3methyl dC (coadministered with HaU) was 325 mg/kg/day for 7 days.
Although the discussion above is centered on the compound F3methyl dC, it will be appreciated that other analogs containing a perfluorinated lower alkyl or lower alkenyl group in the 5-position, for example, 5-pentafluoroethyl-2'deoxycytidine and 5-trifluorovinyl-2'-deoxycytidine, may exhibit similar antiviral and chemotherapeutic activity. In addition, 2',3'-dideoxy F3methyl cytidine may be a selective DNA chain terminator for Herpes infected cells and the arabinosides 5-F3 thymine arabinoside and 5-F3 methylcytosine arabinoside may also be used.
In addition, they may be potential efficacy in 2'-azido-5-F3methyl dC for such uses.
EXAMPLES OF THE INVENTION The present invention is further illustrated by the following non-limiting Examples, wherein percentages are by weight unless otherwise noted.
Example I. -- Synthesis of F3methyl dC A mixture of 5-trifluoromethyl-2'-deoxyundine (F3dU) (10 g; 0.034 mole) hexamethyldisilazane (HMDS), (100 g) and ammonium chloride (0.01 g) was saturated with ammonia and heated at 1500C overnight in a 500-ml Fischer-Porter aerosol compatibility tube. A light brown clear solution was obtained and the heating was continued for a further 24 hours. After a total of 44 hours, the heating was stopped and a clear brown solution was obtained. The solvent was removed under partial vaccum using a rotary evaporator at about 50 to 600 C. The residue was refluxed with methanol (150 ml) for about 6 hours. The methanol was removed using a rotary evaporator to give a solid (about 10 g). The solid was dissolved in boiling water (250 ml), filtered and cooled, giving a crystalline solid (2 g). Further crystals were deposited from the mother liquor which were isolated and shown to be the same as the crystals obtained earlier. The combined crystals were refluxed in ethanol (30 ml) to give the desired compound F3methyl dC.
Elemental Analysis C H N Actual 40.31 4.46 13.70 Theoretical 40.67 4.06 14.23 U.V. Data A (0.1 HCI) = 282 my (E = 10, 410) (max) A (0. I NaOH) = 279 my (E = 10, 280) (max) I.R. Data 3200 (broad, 1650 (broad), 1160, 1100, 1060 cm- Example II.
The experiment of Example I was repeated as follows using a mixture of HMDS and trimethylsilyl chloride (TMCS) as a silylating agent. A mixture of F3dU (5 g), HMDS (50 ml) and TMCS (0.2 ml) in a 100 ml autoclave was saturated with ammonia (lOg) at room temperature. A slight pressure of 1020 psi was recorded.
The mixture was then heated at about 165"C for about 48 hours with a recorded pressure of about 200 psi. The autoclave was then opened and the resulting mixture was poured into a 50-ml flask. The solvent was removed under vacuum leaving a brown viscous liquid. Thin layer chromatography using a water solution indicated that only a trace of the starting materials remained and that the major component of the mixture was a different compound. The mixture was extracted with boiling water (200 ml), decolorized with charcoal, and filtered. The water was removed under vacuum using a rotary evaporator to give about 0.15 to 0.2 g of a compound which was shown by analysis to be the same compound as obtained in Example I.
Example III.
The procedure of Example II was repeated except that the reaction was performed in a sealed tube instead of an autoclave. A mixture of F3dU (3.0 g) and HMDS (2.8 g) was placed in a Fischer-Porter tube and saturated with ammonia for about 30 minutes. A gel was formed. Then, trimethylsilyl chloride (0.2 ml) was added to the mixture, and the tube was sealed and heated to 1400C overnight, giving a pressure of 60 psi.-The temperature was then increased to 150 C giving a pressure of 80 psi. The heating was continued for a further 24 hours. A clear light brown solution was obtained and some solid had sublimed onto the cooler parts of the tube. The tube was cooled and some solid precipitated. The tube was opened and cooled and the HMDS was removed under vacuum at 50 to 600C leaving a viscous brown residue. Methanol (50 ml) was added and the mixture was heated to 65 to 70"C for 6 hours. The methanol was then removed under vacuum leaving a brown solid which was dissolved in hot water (200 ml) and filtered. The filtrate was decolorized with charcoal, filtered and evaporated to dryness, giving a solid (2.5 g).
This solid was dissolved in boiling water, filtered and cooled, yielding crystals (0.1 g) which were shown by analysis to be the same compound as obtained in Examples I and II.
Example IV.
An aqueous solution of the compound F3methyl dC was prepared by dissolving F3methyl dC (about 0.2 gm) in physiologically pure water (5 ml) under sterile conditions. The solution which was suitable for administration by injection, was then sealed in ampoules and stored, ready for future use.
Example V.
A formulation of the compound F3methyl dC suitable for topical administration was prepared by compounding F3methyl dC (0.4 gm) with lanolin (1 gm) as a carrier in a conventional manner to form a cream of smooth consistency, suitable for topical administration.
Example VI.
A mixture of 5-trifluoromethyl-2'-deoxyuridine (F3dU) (18 g), HMDS (200 ml) and TMCS (1.5 ml) in a Fischer-Porter bottle was pressurized with anhydrous ammonia to 40 psi. The stirred mixture was heated at 65 to 750C for 94 hours, giving a pressure of 60 to 70 psi. The excess ammonia was vented off and the excess HMDS was removed under vacuum. Methanol was added to the residue and the mixture was heated to reflux temperature. The methanol was removed under vacuum and the solid residue was recrystallized from water yielding F3methyl dC (7 g) identical to that obtained in Example I.
Analysis C H N Actual 40.72 4.23 14.36 Theoretical 40.67 4.06 14.23 COMPARATIVE EXAMPLE A A mixture of 5-trifluoromethyluracil (0.3), HMDS (5 ml) and TMCS (0.2ml) in a Fischer-Porter tube was pressurized with anhydrous ammonia to 18 psi. The mixture was heated at 160--1700C for 72 hours, giving a pressure of 60 psi. After removal of excess HMDS and hydrolysis of the reaction product with excess methanol under reflux, the starting material (5-trifluormethyluracil) was recovered.
There was no evidence (TLC) of other'products.
TABLE I CYTOTOXICITY OF F3 METHYL dC vs HEp-2 CELLS
% Survival --H4U +H4U Concentration mM .003 .03 .3 .003 .03 .3 Experiment 1 3 < .03 < .03 100 57 < .03 2 0.1 0.0005 < 0.0005 93 15 < 0.00Q5 3 0.1 0.0008 0.007 53 25 0.001 4 0.6 0.02 - 61 31 Average %S 0.95 < 0.01 < 0.01 77 -32 < .01 H4U concentration: 100 yg/ml in experiment 1 and 2 500'1lg/ml in experiment 3 and 4 H4U does not display any cytotoxic activity number of cells capable of forming colonies after trypsinization of treated monolayers %S 100 x number of cells capable of forming colonies aftertrypsinization of untreated monolayers TABLE II ANTIVIRAL ACTIVITY OF F3 METHYL dC vs HSV-2
Log10 Surviving Fraction -H4U +H4U Concentration mM .003 .03 .3 .003 .03 .3 Experiment 1 -0.1 -3.1 -0 -3.0 2 -0.92 -2.7 -3.7 -1.5 -3-7 -3.7 3 -1.8 < -4.1 -1.9 < -4.1 4 -2.9 -3.7 Average log10 S.F. -0.94 -3.2 - 3.7 -1.7 -3.6 -3.7 %S (from Table 1) 0.95 < 0.01 < 0.01 77 32 < 0.01 H4U concentration: 100 yg /ml in experiment 1 and 2 500 CLg/ml in experiment 3 and 4 H4U does not display any antiviral activity Log10 S.F. = Log10 Surviving Fraction of Plaque Forming Units number of plaques obtained on BHK cell monolayers after plating virus obtained by freezing and thawing treated infected monolayers of HEp-2 cells Log10 number of plaques obtained on BHK cell monolayers after plating virus obtained as above from untreated infected HEp-2 monolayers TABLE III CYTOTOXICITY AND ANTIVIRAL ACTIVITY OF F3 METHYL dC WITH AND WITHOUT H4U and 2'dH4U No Addition +H4U +2'dH4U % S of HEp-2 cells: 0.06 mM < 0.006 9 + 3 50 + 5 Log10 S.F. HSV-2: 0.03 mM -3.3 -3.4 -3.5 H4Uand 2'dH4U: 500 Ieg/ml TABLE IV RELATIONSHIP BETWEEN THE CYTOTOXICITY OF F3METHYL dC + H4 U AND ITS ANTIVIRAL ACTIVITY vs HSV-1 AND HSV-2 IN CELL CULTURE CONCENTRATION F, methyl dC mM .003 .03 .3 77 77 32- < .01 (from Table I) Logs0 S.F. vs HSV-2 -1.7 -3.6 -3.7 (from Table II) Logs0 S.F. vs HSV-1 -4.2 < -4.6 ;- (from Figure 3) WHAT WE CLAIM IS:- 1. 5-trifluoromethyl-2'-deoxycytidine.
2. A method for preparing 5-trifluoromethyl-2'-deoxycytidine comprising reacting 5-trifluoromethyl-2'-deoxyuridine, the free hydroxyl groups of which have been protected by a protecting group, with ammonia.
3. Method of claim 2, wherein the protected 5-trifluoromethyl-2'-deoxyuridine is a silylated 5-trifluoromethyl-2'-deoxyuridine.
4. Method of claim 3, wherein the siylated 5-trifluoromethyl-2'-deoxyuridine is prepared by reacting 5-trifluoromethyl-2'-deoxyuridine with at least a stoichiometric amount of silylating agent which is a. silane of the formula (R')3SiX wherein R' is lower (as hereinbefore defined) alkyl and X is halogen, and/or b. disilazane for the formula [(R')3Si]2NH wherein R' is lower (as hereinbefore defined) alkyl, at a temperature of about room temperature to the boiling point of the reaction mixture.
5. Method of claim 4, wherein said silylating agent is hexamethyldisilazane, trimethylsilychloride or a mixture thereof.
6. Method of claim 5, wherein said silylating agent is hexamethyldisilazane.
7. Method of any of claims 2 to 6, wherein said reaction is conducted at a temperature of 50"C to 2500 C.
8. Method of claim 7, wherein the temperature is 60"C to 800 C.
9. Method of any of claims 2 to 8, wherein the reaction is carried out for at least ten hours.
10. Method of claim 2, substantially as hereinbefore described.
II. Method of claim 2, substantially as described in any of the foregoing Examples I, II, III and VI.
12. 5-trifluoromethyl-2'-deoxycytidine, when prepared by a method as claimed in any of claims 2 to 11.
13. A pharmaceutical composition comprising an effective amount of 5 trifluoromethyl-2'-deoxycytidine and a pharmaceutically acceptable carrier or diluent.
14. Composition of claim 13 containing an inhibiting amount of a cytidine deaminase inhibitor.
15. Composition of claim 13 or 14, wherein said 5-trifluoromethyl-2' deoxycytidine is present in said composition in an amount of about 0.01 to 50% by weight.
16. Composition of claim 14 or 15, wherein said cytidine deaminase inhibitor is tetrahydrouridine or 2'-deoxytetrahydrouridine.
17. Composition of claim 14, 15, or 16, wherein the weight ratio of said cytidine
**WARNING** end of DESC field may overlap start of CLMS **.

Claims (34)

**WARNING** start of CLMS field may overlap end of DESC **. TABLE IV RELATIONSHIP BETWEEN THE CYTOTOXICITY OF F3METHYL dC + H4 U AND ITS ANTIVIRAL ACTIVITY vs HSV-1 AND HSV-2 IN CELL CULTURE CONCENTRATION F, methyl dC mM .003 .03 .3 77 77 32- < .01 (from Table I) Logs0 S.F. vs HSV-2 -1.7 -3.6 -3.7 (from Table II) Logs0 S.F. vs HSV-1 -4.2 < -4.6 ;- (from Figure 3) WHAT WE CLAIM IS:-
1. 5-trifluoromethyl-2'-deoxycytidine.
2. A method for preparing 5-trifluoromethyl-2'-deoxycytidine comprising reacting 5-trifluoromethyl-2'-deoxyuridine, the free hydroxyl groups of which have been protected by a protecting group, with ammonia.
3. Method of claim 2, wherein the protected 5-trifluoromethyl-2'-deoxyuridine is a silylated 5-trifluoromethyl-2'-deoxyuridine.
4. Method of claim 3, wherein the siylated 5-trifluoromethyl-2'-deoxyuridine is prepared by reacting 5-trifluoromethyl-2'-deoxyuridine with at least a stoichiometric amount of silylating agent which is a. silane of the formula (R')3SiX wherein R' is lower (as hereinbefore defined) alkyl and X is halogen, and/or b. disilazane for the formula [(R')3Si]2NH wherein R' is lower (as hereinbefore defined) alkyl, at a temperature of about room temperature to the boiling point of the reaction mixture.
5. Method of claim 4, wherein said silylating agent is hexamethyldisilazane, trimethylsilychloride or a mixture thereof.
6. Method of claim 5, wherein said silylating agent is hexamethyldisilazane.
7. Method of any of claims 2 to 6, wherein said reaction is conducted at a temperature of 50"C to 2500 C.
8. Method of claim 7, wherein the temperature is 60"C to 800 C.
9. Method of any of claims 2 to 8, wherein the reaction is carried out for at least ten hours.
10. Method of claim 2, substantially as hereinbefore described.
II. Method of claim 2, substantially as described in any of the foregoing Examples I, II, III and VI.
12. 5-trifluoromethyl-2'-deoxycytidine, when prepared by a method as claimed in any of claims 2 to 11.
13. A pharmaceutical composition comprising an effective amount of 5 trifluoromethyl-2'-deoxycytidine and a pharmaceutically acceptable carrier or diluent.
14. Composition of claim 13 containing an inhibiting amount of a cytidine deaminase inhibitor.
15. Composition of claim 13 or 14, wherein said 5-trifluoromethyl-2' deoxycytidine is present in said composition in an amount of about 0.01 to 50% by weight.
16. Composition of claim 14 or 15, wherein said cytidine deaminase inhibitor is tetrahydrouridine or 2'-deoxytetrahydrouridine.
17. Composition of claim 14, 15, or 16, wherein the weight ratio of said cytidine
deaminase inhibitor to said 5-trifluoromethyl-2'-deoxycytidine is from about 500:1 to 1:1.
18. Composition of any one of claims 13 to 17, in a form suitable for intravenous administration.
19. Composition of claim 18, wherein said 5-trifluoromethyl-2'-deoxycytidine is present in an amount of 0.05 to about 5% by weight.
20. Composition of any one of claims 13 to 17, in a form suitable for topical administration.
21. Composition of claim 20, wherein the amount of said 5-trifluoromethyl-2'deoxycytidine in said composition is about 5 to 50% by weight.
22. Composition of any one of claims 13 to 17, in a form suitable for oral administration.
23. Composition of claim 22, wherein said 5-trifluoromethyl-2'-deoxycytidine is present in an amount of about 0.05 to 10% by weight.
24. Composition of claim 13, substantially as hereinbefore described.
25. Composition of claim 13, substantially as described in Example IV or V.
26. A method of treating a non-human patient suffering from a disease caused by a Herpes or Herpes-like virus, said method comprising administering to said patient a therapeutically effective amount of 5-trifluoromethyl-2'-deoxycytidine as claimed in claim 1 or claim 12, and an inhibiting amount of a cytidine deaminase inhibitor.
27. Method of claim 26, wherein said inhibitor is administered to the patient prior to the administration of said 5-trifluoromethyl-2'-deoxycytidine.
28. A method according to claim 26 or 27, wherein the disease is caused by a Herpes Simplex Virus type 1 or 2 or varicella-zoster virus.
29. A method of claims 26, 27 or 28, wherein the 5-trifluoromethyl-2'deoxycytidine is administered to the patient in an amount of about 0.01 to 0.25 mmoles/kg of body weight/day.
30. A method of claim 29, wherein the 5-trifluoromethyl-2'-deoxycytidine is administered to the patient in an amount of about 10 mg/kg body weight/day.
31. Method of any of claims 26 to 30, wherein said cytidine deaminase inhibitor is tetrahydrouridine or 2'-deoxytetrahydrouridine.
32. Method of any of claims 26 to 31, wherein said cytidine deaminase inhibitor is administered such that the weight ratio of said inhibitor to said 5trifluoromethyl-2'-deoxycytidine is about 500:1 to 1:1.
33. Method of claim 26, substantially as hereinbefore described with reference to Figures 1, 2 and 3.
34. Method of destroying Herpes and Herpes-like viruses other than in the human body, which comprises contacting said viruses with 5-trifluoromethyl2'deoxycytidine or a metabolite thereof in an amount effective to destroy said viruses.
GB24858/78A 1978-03-17 1978-05-31 Cytidine derivative Expired GB1588550A (en)

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